Citrus Sinensis ID: 028043
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 214 | 2.2.26 [Sep-21-2011] | |||||||
| Q8H124 | 280 | Uncharacterized protein A | no | no | 0.551 | 0.421 | 0.385 | 3e-09 | |
| O80934 | 325 | Uncharacterized protein A | no | no | 0.546 | 0.36 | 0.323 | 4e-07 | |
| Q8SKU2 | 534 | Protein TIC 62, chloropla | N/A | no | 0.593 | 0.237 | 0.285 | 3e-05 | |
| Q94EG6 | 253 | Uncharacterized protein A | no | no | 0.532 | 0.450 | 0.287 | 0.0002 |
| >sp|Q8H124|Y2446_ARATH Uncharacterized protein At2g34460, chloroplastic OS=Arabidopsis thaliana GN=At2g34460 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 65/127 (51%), Gaps = 9/127 (7%)
Query: 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGD- 137
A +K V VAG +G G+ +V LLSR + +RD EKA T F +D+ +LQ+ + D
Sbjct: 43 AVKTKKVFVAGATGQTGKRIVEQLLSRGFAVKAGVRDVEKAKTSF--KDDPSLQIVRADV 100
Query: 138 TRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-PSSLKR 196
T P L I + VIC TG R TP KVD G NLV A +++
Sbjct: 101 TEGPDKLAEVIGDDSQAVICATGF-----RPGFDIFTPWKVDNFGTVNLVDACRKQGVEK 155
Query: 197 IVLVSSV 203
VLVSS+
Sbjct: 156 FVLVSSI 162
|
Arabidopsis thaliana (taxid: 3702) |
| >sp|O80934|Y2766_ARATH Uncharacterized protein At2g37660, chloroplastic OS=Arabidopsis thaliana GN=At2g37660 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 70/142 (49%), Gaps = 25/142 (17%)
Query: 85 VLVAGGSGGVGQLVVASLLSRNIK--SRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK 142
VLV G G GQ+V L R+ + +R L+R E + G +DE V GD R+
Sbjct: 79 VLVTGAGGRTGQIVYKKLKERSEQFVARGLVRTKESKEKING-EDE----VFIGDIRDTA 133
Query: 143 DLDPAIFEGVTHVICCTGTTAFPSRR--------------WDGDNTPEKVDWEGVRNLVS 188
+ PA+ EG+ ++ T +A P + +D PE+VDW G +N +
Sbjct: 134 SIAPAV-EGIDALVILT--SAVPQMKPGFDPSKGGRPEFFFDDGAYPEQVDWIGQKNQID 190
Query: 189 ALPSS-LKRIVLVSSVGVTKFN 209
A ++ +K+IVLV S+G T N
Sbjct: 191 AAKAAGVKQIVLVGSMGGTNIN 212
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Arabidopsis thaliana (taxid: 3702) |
| >sp|Q8SKU2|TIC62_PEA Protein TIC 62, chloroplastic OS=Pisum sativum GN=TIC62 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 64/147 (43%), Gaps = 20/147 (13%)
Query: 77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF------------- 123
T + LV VAG +G VG V L+ K R +R+ +KA L
Sbjct: 83 TDSKDDNLVFVAGATGKVGSRTVRELIKLGFKVRAGVRNAQKAGALVQSVKQLKLDGASG 142
Query: 124 GKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNT-PEKVDWEG 182
G + E L++ + D + A+ T VIC G S + D T P ++D+
Sbjct: 143 GGEAVEKLEIVECDLEKADQIGSALGNAST-VICAIGA----SEKEIFDITGPCRIDYRA 197
Query: 183 VRNLVSALP-SSLKRIVLVSSVGVTKF 208
+NLV A + + +LV+S+G KF
Sbjct: 198 TKNLVDAATVAKVNHFILVTSLGTNKF 224
|
Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62. Has a NADPH-dependent dehydrogenase activity, but only after preincubation with lipids. Pisum sativum (taxid: 3888) |
| >sp|Q94EG6|Y5224_ARATH Uncharacterized protein At5g02240 OS=Arabidopsis thaliana GN=At5g02240 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 66/139 (47%), Gaps = 25/139 (17%)
Query: 85 VLVAGGSGGVGQLVVASLLSRNIK--SRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK 142
VLV G SG GQ+V L + K ++ L+R + + G+ D V GD +
Sbjct: 7 VLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEAD-----VFIGDITDAD 61
Query: 143 DLDPAIFEGVTHVICCTGTTAFPSRR--------------WDGDNTPEKVDWEGVRNLVS 188
++PA F+G+ ++ T +A P + ++ PE+VDW G +N +
Sbjct: 62 SINPA-FQGIDALVILT--SAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQID 118
Query: 189 ALP-SSLKRIVLVSSVGVT 206
A + +K IV+V S+G T
Sbjct: 119 AAKVAGVKHIVVVGSMGGT 137
|
Arabidopsis thaliana (taxid: 3702) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 214 | ||||||
| 255551331 | 385 | hypothetical protein RCOM_1245600 [Ricin | 0.995 | 0.553 | 0.702 | 1e-75 | |
| 225436583 | 336 | PREDICTED: uncharacterized protein At2g3 | 0.990 | 0.630 | 0.705 | 3e-67 | |
| 449442565 | 340 | PREDICTED: uncharacterized protein At2g3 | 0.943 | 0.594 | 0.683 | 1e-66 | |
| 449518143 | 340 | PREDICTED: uncharacterized protein At2g3 | 0.943 | 0.594 | 0.679 | 6e-66 | |
| 224054522 | 286 | predicted protein [Populus trichocarpa] | 0.747 | 0.559 | 0.818 | 3e-61 | |
| 356560673 | 324 | PREDICTED: uncharacterized protein At2g3 | 0.906 | 0.598 | 0.634 | 8e-58 | |
| 356504448 | 334 | PREDICTED: uncharacterized protein At5g0 | 0.939 | 0.601 | 0.627 | 6e-54 | |
| 293332867 | 336 | uncharacterized protein LOC100381586 [Ze | 0.719 | 0.458 | 0.746 | 8e-53 | |
| 297802876 | 324 | catalytic/ coenzyme binding protein [Ara | 0.831 | 0.549 | 0.686 | 3e-52 | |
| 242035733 | 337 | hypothetical protein SORBIDRAFT_01g03510 | 0.532 | 0.338 | 0.815 | 2e-51 |
| >gi|255551331|ref|XP_002516712.1| hypothetical protein RCOM_1245600 [Ricinus communis] gi|223544207|gb|EEF45731.1| hypothetical protein RCOM_1245600 [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 158/225 (70%), Positives = 182/225 (80%), Gaps = 12/225 (5%)
Query: 1 MATELFFFTSIPNLPFPLIKFPKHHQSLPLFSLAPPTISSRF-------KTVSSSKARPS 53
MA +LFF IPN P K K Q +PL L P ISS + ++VSSS + S
Sbjct: 1 MACKLFF-APIPNCPLSHTKLSKFPQRIPLHFLPPFNISSGYYSSSRTVQSVSSSSSSSS 59
Query: 54 SSTVVVHAVQEEVVQTPNS----DSKVTPASSSKLVLVAGGSGGVGQLVVASLLSRNIKS 109
SS++VVHA++EEV+Q+PNS DS TP SSSKLVLV GGSGGVGQLVVASLL+RNIKS
Sbjct: 60 SSSLVVHALKEEVIQSPNSEATYDSITTPPSSSKLVLVIGGSGGVGQLVVASLLNRNIKS 119
Query: 110 RLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRW 169
RLLLR+P KAT LFGKQDEE LQV +GDTRNP DLDP+IF+G+THVICCTGTTAFPSRRW
Sbjct: 120 RLLLREPAKATALFGKQDEEMLQVFEGDTRNPGDLDPSIFKGITHVICCTGTTAFPSRRW 179
Query: 170 DGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNELPWR 214
+GDNTPE+VDWEGVRNL+SA+PS+LKR+VLVSSVGVTKFNELPWR
Sbjct: 180 NGDNTPERVDWEGVRNLISAMPSTLKRVVLVSSVGVTKFNELPWR 224
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225436583|ref|XP_002274972.1| PREDICTED: uncharacterized protein At2g37660, chloroplastic [Vitis vinifera] gi|296083822|emb|CBI24210.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 153/217 (70%), Positives = 167/217 (76%), Gaps = 5/217 (2%)
Query: 1 MATELFFFTSIPNLPFPLIKFPKHHQSLPLFSLAPPTISSRFKTVSSSKARPSSSTVVVH 60
MAT L I P K PK+ Q +P+FSL P S V H
Sbjct: 1 MATNLQLL-PIHGFPLSSWKCPKYPQRVPVFSLQPLNPPPPPPPSPKSILSSRRRASVAH 59
Query: 61 AVQEEVVQTPNSD----SKVTPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP 116
AV+EEV+Q+PNSD SK +P +SSKLVLV GGSGGVGQL+VASLL RNIKSRLLLRDP
Sbjct: 60 AVKEEVIQSPNSDPALDSKTSPPASSKLVLVVGGSGGVGQLIVASLLDRNIKSRLLLRDP 119
Query: 117 EKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPE 176
EKAT+LFGKQDEETLQV KGDTRN +DL+ +IFEGVTHVICCTGTTAFPS+RWDGDNTPE
Sbjct: 120 EKATSLFGKQDEETLQVYKGDTRNLEDLNSSIFEGVTHVICCTGTTAFPSKRWDGDNTPE 179
Query: 177 KVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNELPW 213
KVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNELPW
Sbjct: 180 KVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNELPW 216
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449442565|ref|XP_004139052.1| PREDICTED: uncharacterized protein At2g37660, chloroplastic-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 147/215 (68%), Positives = 171/215 (79%), Gaps = 13/215 (6%)
Query: 8 FTSIPNLPFPLIKFPKHHQSLPLFSLAPPTISSRF-----KTVSSSKARPSSSTVVVHAV 62
+ IP+ P P F K Q+LPLF+L P SS F KT+SS + PS + + A+
Sbjct: 9 LSYIPHFPHPPTTFHKTFQTLPLFTLPPLCSSSSFENQLRKTISSCRL-PSPA---IRAI 64
Query: 63 QEEVVQTPNS----DSKVTPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK 118
+EVVQTP+S DSK P +SSK VLV GGSGGVGQLV A+LL RN+K RLLLRDPEK
Sbjct: 65 NQEVVQTPSSKSTRDSKTDPVASSKFVLVVGGSGGVGQLVAAALLDRNVKLRLLLRDPEK 124
Query: 119 ATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKV 178
ATTLFG+QDE+ LQVCKGDTRNP+DLDP+IFEGVTHVICCTGTTAFPSRRWD DNTPE+V
Sbjct: 125 ATTLFGEQDEKLLQVCKGDTRNPEDLDPSIFEGVTHVICCTGTTAFPSRRWDEDNTPERV 184
Query: 179 DWEGVRNLVSALPSSLKRIVLVSSVGVTKFNELPW 213
DWEGVRNL+SA+P S+KR+VLVSS+GVTKFNELPW
Sbjct: 185 DWEGVRNLISAIPRSVKRVVLVSSIGVTKFNELPW 219
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Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449518143|ref|XP_004166103.1| PREDICTED: uncharacterized protein At2g37660, chloroplastic-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 256 bits (653), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 146/215 (67%), Positives = 169/215 (78%), Gaps = 13/215 (6%)
Query: 8 FTSIPNLPFPLIKFPKHHQSLPLFSLAPPTISSRF-----KTVSSSKARPSSSTVVVHAV 62
+ IP+ P P F K Q+LPLF+L P SS F KT+SS + PS + + A+
Sbjct: 9 LSYIPHFPHPPTTFHKTFQTLPLFTLPPLCSSSSFENQLRKTISSCRL-PSPA---IRAI 64
Query: 63 QEEVVQTPNS----DSKVTPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK 118
+EVVQTP+S DSK P +SSK VLV GGSGGVGQLV A+LL RN+K RLLLRDPEK
Sbjct: 65 NQEVVQTPSSESTHDSKTDPVASSKFVLVVGGSGGVGQLVAAALLDRNVKLRLLLRDPEK 124
Query: 119 ATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKV 178
A TLFG+QDE LQVCKGDTRNP+DLDP+IFEGVTHVICCTGTTAFPSRRWD DNTPE+V
Sbjct: 125 AATLFGEQDENLLQVCKGDTRNPEDLDPSIFEGVTHVICCTGTTAFPSRRWDEDNTPERV 184
Query: 179 DWEGVRNLVSALPSSLKRIVLVSSVGVTKFNELPW 213
DWEGVRNL+SA+P S+KR+VLVSS+GVTKFNELPW
Sbjct: 185 DWEGVRNLISAIPRSVKRVVLVSSIGVTKFNELPW 219
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224054522|ref|XP_002298302.1| predicted protein [Populus trichocarpa] gi|222845560|gb|EEE83107.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 135/165 (81%), Positives = 150/165 (90%), Gaps = 5/165 (3%)
Query: 54 SSTVVVHAVQEEVV-QTPNSD----SKVTPASSSKLVLVAGGSGGVGQLVVASLLSRNIK 108
+S +V HAV+EEV+ Q+PNS+ S+ TP SSSKLVLV GGSGGVGQLVVA+LL+RNIK
Sbjct: 2 TSPLVAHAVKEEVIDQSPNSEATLGSETTPPSSSKLVLVVGGSGGVGQLVVAALLNRNIK 61
Query: 109 SRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRR 168
SRLLLRDPEKA LFGKQDEE +QV KGDTRNP+DLDP++FEGVTHVICCTGTTAFPSRR
Sbjct: 62 SRLLLRDPEKAVALFGKQDEEKMQVYKGDTRNPEDLDPSLFEGVTHVICCTGTTAFPSRR 121
Query: 169 WDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNELPW 213
WDGDNTPE+ DWEGVRNLVSALPS+LKRIVLVSSVGVTKFNELPW
Sbjct: 122 WDGDNTPERTDWEGVRNLVSALPSTLKRIVLVSSVGVTKFNELPW 166
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356560673|ref|XP_003548614.1| PREDICTED: uncharacterized protein At2g37660, chloroplastic-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 229 bits (583), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 130/205 (63%), Positives = 155/205 (75%), Gaps = 11/205 (5%)
Query: 19 IKFPKHHQSLPLFSLAPPTISSRFKTVSSSKARPSSSTV------VVHAVQEEVVQTPNS 72
+ F + H S+ + T S ++SSS A S +A+ EE V+T +S
Sbjct: 1 MAFAQRHHSVTQRQVLFFTKFSNRVSLSSSLASKRSCNYNCFYAKAQNALNEEAVETKSS 60
Query: 73 ----DSKVTPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDE 128
D++ TP SSSKLVLVAGGSGGVGQLVVASLL +NIKSRL+LR+P+KAT LFG+QD+
Sbjct: 61 ELKKDTQRTP-SSSKLVLVAGGSGGVGQLVVASLLQQNIKSRLILRNPDKATELFGEQDK 119
Query: 129 ETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVS 188
E LQV KGDTR DLDP++FEGVTHVICCTGTTAFPSRRWD DNTPE+VDW GV+NLVS
Sbjct: 120 EKLQVFKGDTRKQGDLDPSMFEGVTHVICCTGTTAFPSRRWDDDNTPERVDWMGVKNLVS 179
Query: 189 ALPSSLKRIVLVSSVGVTKFNELPW 213
ALPSS+K +VLVSS+GVTKFNELPW
Sbjct: 180 ALPSSVKSVVLVSSIGVTKFNELPW 204
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356504448|ref|XP_003521008.1| PREDICTED: uncharacterized protein At5g02240-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 216 bits (549), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 135/215 (62%), Positives = 163/215 (75%), Gaps = 14/215 (6%)
Query: 9 TSIPNLPFPLIKFPKHHQSLP----LFSLAPPTISSRFKTVSSSKARPSSS--TVVVHAV 62
++ P LP + FP+ H S+ LF S +V+S ++ S V +A+
Sbjct: 4 STTPTLP---LAFPQRHHSVSHRQVLFFAKFSNKVSLSSSVASKRSCKSKCFYAKVQNAL 60
Query: 63 QEEVVQTPNS----DSKVTPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK 118
EE V+T +S D++ TP SSSKLVLV GGSGGVGQLVVASLL +NIKSRL+LR+PEK
Sbjct: 61 NEEAVETQSSELEEDTQSTP-SSSKLVLVVGGSGGVGQLVVASLLQQNIKSRLILRNPEK 119
Query: 119 ATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKV 178
AT LFG+QD+E LQV KGDTR +DLDP+IFEGVTHVICCTGTTAFPSRRWD DNTPE+V
Sbjct: 120 ATELFGEQDKEKLQVFKGDTRKQEDLDPSIFEGVTHVICCTGTTAFPSRRWDDDNTPERV 179
Query: 179 DWEGVRNLVSALPSSLKRIVLVSSVGVTKFNELPW 213
DW G++NLVSALPSS+KR+VLVSS+GVTKFNELPW
Sbjct: 180 DWVGLKNLVSALPSSVKRVVLVSSIGVTKFNELPW 214
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|293332867|ref|NP_001167879.1| uncharacterized protein LOC100381586 [Zea mays] gi|223944601|gb|ACN26384.1| unknown [Zea mays] gi|413955704|gb|AFW88353.1| hypothetical protein ZEAMMB73_697631 [Zea mays] | Back alignment and taxonomy information |
|---|
Score = 212 bits (540), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 115/154 (74%), Positives = 133/154 (86%)
Query: 60 HAVQEEVVQTPNSDSKVTPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA 119
AVQE+ + + +SSKLVLV GG+GGVGQLVVASLLSRNIKSRLLLRDPEKA
Sbjct: 63 QAVQEQPARAEEAGGAGAAEASSKLVLVVGGTGGVGQLVVASLLSRNIKSRLLLRDPEKA 122
Query: 120 TTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVD 179
++LFGKQDE LQV K DTRNP DLDP +FEGVTHVICCTGTTAFPS+RWDGDNTPE+VD
Sbjct: 123 SSLFGKQDESVLQVYKADTRNPNDLDPQMFEGVTHVICCTGTTAFPSKRWDGDNTPERVD 182
Query: 180 WEGVRNLVSALPSSLKRIVLVSSVGVTKFNELPW 213
W+G+RNLVSALP ++KR+VLVSS+GVTK+NE+PW
Sbjct: 183 WDGIRNLVSALPQTVKRLVLVSSIGVTKYNEIPW 216
|
Source: Zea mays Species: Zea mays Genus: Zea Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297802876|ref|XP_002869322.1| catalytic/ coenzyme binding protein [Arabidopsis lyrata subsp. lyrata] gi|297315158|gb|EFH45581.1| catalytic/ coenzyme binding protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 127/185 (68%), Positives = 149/185 (80%), Gaps = 7/185 (3%)
Query: 29 PLFSLAPPTISSRFKTVSSSKARPSSSTVVVHAVQEEVVQTPNSDSKVTPASSSKLVLVA 88
PLF+ +P T+ S F V + +A SSS V A EE V T + +SSSKLVLV
Sbjct: 27 PLFT-SPLTLPSSFFLVRN-EASLSSSITPVQAFTEEAVDTSD-----LASSSSKLVLVV 79
Query: 89 GGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI 148
GG+GGVGQL+VASLL RNI+SRLLLRD +KAT LFGKQDE +LQV KGDTRN +DLDP++
Sbjct: 80 GGTGGVGQLLVASLLKRNIRSRLLLRDLDKATKLFGKQDEYSLQVVKGDTRNAEDLDPSM 139
Query: 149 FEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKF 208
FEGVTHVIC TGTTAFPS+RW+ +NTPEKVDWEGV+NL+SALPSS+KR+VLVSSVGVTK
Sbjct: 140 FEGVTHVICTTGTTAFPSKRWNEENTPEKVDWEGVKNLISALPSSVKRVVLVSSVGVTKS 199
Query: 209 NELPW 213
NELPW
Sbjct: 200 NELPW 204
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|242035733|ref|XP_002465261.1| hypothetical protein SORBIDRAFT_01g035100 [Sorghum bicolor] gi|241919115|gb|EER92259.1| hypothetical protein SORBIDRAFT_01g035100 [Sorghum bicolor] | Back alignment and taxonomy information |
|---|
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 93/114 (81%), Positives = 106/114 (92%)
Query: 100 ASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT 159
ASLLSRNIKSRLLLRDPEKA++LFGKQD+ LQV K DTRN DLDP +FEGVTHVICCT
Sbjct: 106 ASLLSRNIKSRLLLRDPEKASSLFGKQDDSVLQVYKADTRNSNDLDPQMFEGVTHVICCT 165
Query: 160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNELPW 213
GTTAFPS+RWDGDNTPE+VDW+G+RNLVSALP ++KR+VLVSSVGVTK+NE+PW
Sbjct: 166 GTTAFPSKRWDGDNTPERVDWDGIRNLVSALPQTIKRLVLVSSVGVTKYNEIPW 219
|
Source: Sorghum bicolor Species: Sorghum bicolor Genus: Sorghum Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
No hits with e-value below 0.001 by BLAST
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 214 | |||
| cd05243 | 203 | cd05243, SDR_a5, atypical (a) SDRs, subgroup 5 | 1e-30 | |
| cd05226 | 176 | cd05226, SDR_e_a, Extended (e) and atypical (a) SD | 3e-16 | |
| pfam13460 | 182 | pfam13460, NAD_binding_10, NADH(P)-binding | 7e-16 | |
| PLN00141 | 251 | PLN00141, PLN00141, Tic62-NAD(P)-related group II | 2e-12 | |
| COG0702 | 275 | COG0702, COG0702, Predicted nucleoside-diphosphate | 5e-12 | |
| cd05244 | 207 | cd05244, BVR-B_like_SDR_a, biliverdin IX beta redu | 1e-10 | |
| TIGR03466 | 328 | TIGR03466, HpnA, hopanoid-associated sugar epimera | 5e-08 | |
| cd05228 | 318 | cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr | 7e-08 | |
| cd05269 | 272 | cd05269, TMR_SDR_a, triphenylmethane reductase (TM | 1e-07 | |
| cd05227 | 301 | cd05227, AR_SDR_e, aldehyde reductase, extended (e | 2e-07 | |
| cd05271 | 273 | cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub | 3e-07 | |
| PLN03209 | 576 | PLN03209, PLN03209, translocon at the inner envelo | 9e-07 | |
| CHL00194 | 317 | CHL00194, ycf39, Ycf39; Provisional | 2e-06 | |
| COG0451 | 314 | COG0451, WcaG, Nucleoside-diphosphate-sugar epimer | 2e-06 | |
| cd05193 | 295 | cd05193, AR_like_SDR_e, aldehyde reductase, flavon | 6e-06 | |
| cd05250 | 214 | cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical | 7e-06 | |
| cd08958 | 293 | cd08958, FR_SDR_e, flavonoid reductase (FR), exten | 7e-06 | |
| cd09813 | 335 | cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD | 8e-06 | |
| cd05259 | 282 | cd05259, PCBER_SDR_a, phenylcoumaran benzylic ethe | 3e-05 | |
| pfam01073 | 280 | pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr | 3e-05 | |
| PLN02896 | 353 | PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase | 4e-05 | |
| PLN02657 | 390 | PLN02657, PLN02657, 3,8-divinyl protochlorophyllid | 5e-05 | |
| cd05241 | 331 | cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d | 5e-05 | |
| pfam01370 | 233 | pfam01370, Epimerase, NAD dependent epimerase/dehy | 3e-04 | |
| cd05263 | 293 | cd05263, MupV_like_SDR_e, Pseudomonas fluorescens | 4e-04 | |
| cd05229 | 302 | cd05229, SDR_a3, atypical (a) SDRs, subgroup 3 | 5e-04 | |
| PLN02662 | 322 | PLN02662, PLN02662, cinnamyl-alcohol dehydrogenase | 7e-04 | |
| PLN00198 | 338 | PLN00198, PLN00198, anthocyanidin reductase; Provi | 7e-04 | |
| cd05266 | 251 | cd05266, SDR_a4, atypical (a) SDRs, subgroup 4 | 0.001 | |
| cd05274 | 375 | cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatt | 0.001 | |
| pfam05368 | 232 | pfam05368, NmrA, NmrA-like family | 0.001 | |
| cd05231 | 259 | cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcript | 0.001 | |
| cd05242 | 296 | cd05242, SDR_a8, atypical (a) SDRs, subgroup 8 | 0.001 | |
| cd05265 | 250 | cd05265, SDR_a1, atypical (a) SDRs, subgroup 1 | 0.002 | |
| cd05251 | 242 | cd05251, NmrA_like_SDR_a, NmrA (a transcriptional | 0.003 | |
| PLN02650 | 351 | PLN02650, PLN02650, dihydroflavonol-4-reductase | 0.003 | |
| cd08932 | 223 | cd08932, HetN_like_SDR_c, HetN oxidoreductase-like | 0.003 | |
| smart00822 | 180 | smart00822, PKS_KR, This enzymatic domain is part | 0.004 | |
| TIGR01777 | 291 | TIGR01777, yfcH, TIGR01777 family protein | 0.004 |
| >gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5 | Back alignment and domain information |
|---|
Score = 111 bits (279), Expect = 1e-30
Identities = 46/129 (35%), Positives = 64/129 (49%), Gaps = 12/129 (9%)
Query: 85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
VLV G +G VG+ VV LL R + R L+RDP +A K + +V GD + + L
Sbjct: 2 VLVVGATGKVGRHVVRELLDRGYQVRALVRDPSQA----EKLEAAGAEVVVGDLTDAESL 57
Query: 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSS-LKRIVLVSSV 203
A EG+ VI G+ G E VD++G NL+ A + +KR VLVSS+
Sbjct: 58 AAA-LEGIDAVISAAGSGG------KGGPRTEAVDYDGNINLIDAAKKAGVKRFVLVSSI 110
Query: 204 GVTKFNELP 212
G K +
Sbjct: 111 GADKPSHPL 119
|
This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203 |
| >gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 72.8 bits (179), Expect = 3e-16
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 13/124 (10%)
Query: 85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
+L+ G +G +G+ + LL + + LL+R+ ++ + + V +GD R+ L
Sbjct: 1 ILILGATGFIGRALARELLEQGHEVTLLVRNTKRLSKEDQEPVA----VVEGDLRDLDSL 56
Query: 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-PSSLKRIVLVSSV 203
A +GV VI G D + +VD EG RN++ A + +K + +SS+
Sbjct: 57 SDA-VQGVDVVIHLAGA------PRDTRD-FCEVDVEGTRNVLEAAKEAGVKHFIFISSL 108
Query: 204 GVTK 207
G
Sbjct: 109 GAYG 112
|
Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176 |
| >gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding | Back alignment and domain information |
|---|
Score = 72.0 bits (177), Expect = 7e-16
Identities = 32/122 (26%), Positives = 54/122 (44%), Gaps = 23/122 (18%)
Query: 85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
+ V G +G G+ +V LL+R + L R+P KA + + D + DL
Sbjct: 1 IAVIGATGKTGRRLVKELLARGHQVTALSRNPSKAP-------APGVTPVQKDLFDLADL 53
Query: 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSS-LKRIVLVSSV 203
A+ GV V+ G D +GV++L+ A + ++RIV+VS+
Sbjct: 54 AEAL-AGVDAVVDAFGARPD--------------DSDGVKHLLDAAARAGVRRIVVVSAA 98
Query: 204 GV 205
G+
Sbjct: 99 GL 100
|
Length = 182 |
| >gnl|CDD|215072 PLN00141, PLN00141, Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Score = 64.1 bits (156), Expect = 2e-12
Identities = 44/134 (32%), Positives = 64/134 (47%), Gaps = 9/134 (6%)
Query: 74 SKVTPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQV 133
+ +K V VAG +G G+ +V LL++ + +RD +KA T + +LQ+
Sbjct: 9 EEDAENVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSL--PQDPSLQI 66
Query: 134 CKGD-TRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-P 191
+ D T L AI + VIC TG R +D P KVD G NLV A
Sbjct: 67 VRADVTEGSDKLVEAIGDDSDAVICATGF----RRSFD-PFAPWKVDNFGTVNLVEACRK 121
Query: 192 SSLKRIVLVSSVGV 205
+ + R +LVSS+ V
Sbjct: 122 AGVTRFILVSSILV 135
|
Length = 251 |
| >gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 63.0 bits (153), Expect = 5e-12
Identities = 38/123 (30%), Positives = 55/123 (44%), Gaps = 13/123 (10%)
Query: 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK 142
+LV G +G VG VV LL+R + R +R+PE A L G ++V GD R+PK
Sbjct: 1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALAGG-----VEVVLGDLRDPK 55
Query: 143 DLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSS 202
L +GV V+ +G DG + V V A + +K V +S
Sbjct: 56 SLVAG-AKGVDGVLLISGLL-------DGSDAFRAVQVTAVVRAAEAAGAGVKHGVSLSV 107
Query: 203 VGV 205
+G
Sbjct: 108 LGA 110
|
Length = 275 |
| >gnl|CDD|187555 cd05244, BVR-B_like_SDR_a, biliverdin IX beta reductase (BVR-B, aka flavin reductase)-like proteins; atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 58.4 bits (142), Expect = 1e-10
Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 15/122 (12%)
Query: 85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
+ + G +G G +V L+R + L+RDP K + E L+V +GD + +D+
Sbjct: 2 IAIIGATGRTGSAIVREALARGHEVTALVRDPAKLP-----AEHEKLKVVQGDVLDLEDV 56
Query: 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-PSSLKRIVLVSSV 203
A+ EG VI GT D +P + EG RN+VSA+ + +KR+++V
Sbjct: 57 KEAL-EGQDAVISALGT--------RNDLSPTTLHSEGTRNIVSAMKAAGVKRLIVVGGA 107
Query: 204 GV 205
G
Sbjct: 108 GS 109
|
Human BVR-B catalyzes pyridine nucleotide-dependent production of bilirubin-IX beta during fetal development; in the adult BVR-B has flavin and ferric reductase activities. Human BVR-B catalyzes the reduction of FMN, FAD, and riboflavin. Recognition of flavin occurs mostly by hydrophobic interactions, accounting for the broad substrate specificity. Atypical SDRs are distinct from classical SDRs. BVR-B does not share the key catalytic triad, or conserved tyrosine typical of SDRs. The glycine-rich NADP-binding motif of BVR-B is GXXGXXG, which is similar but not identical to the pattern seen in extended SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 207 |
| >gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Score = 51.5 bits (124), Expect = 5e-08
Identities = 41/132 (31%), Positives = 58/132 (43%), Gaps = 15/132 (11%)
Query: 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK 142
VLV G +G VG VV LL + + R+L+R L G E + +GD R+P
Sbjct: 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEGLDVE----IVEGDLRDPA 56
Query: 143 DLDPAI--FEGVTHVICCTGTTAFPSRRWDGD-NTPEKVDWEGVRNLV-SALPSSLKRIV 198
L A+ + HV A R W D + EG RNL+ +AL + ++R+V
Sbjct: 57 SLRKAVAGCRALFHV-------AADYRLWAPDPEEMYAANVEGTRNLLRAALEAGVERVV 109
Query: 199 LVSSVGVTKFNE 210
SSV
Sbjct: 110 YTSSVATLGVRG 121
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328 |
| >gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 51.1 bits (123), Expect = 7e-08
Identities = 34/127 (26%), Positives = 59/127 (46%), Gaps = 11/127 (8%)
Query: 85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
+LV G +G +G +V +LL++ + R L+R A L G ++V +GD + L
Sbjct: 1 ILVTGATGFLGSNLVRALLAQGYRVRALVRSGSDAVLLDG----LPVEVVEGDLTDAASL 56
Query: 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTP-EKVDWEGVRNLV-SALPSSLKRIVLVSS 202
A +G V T+ W D + + EG RN++ +AL + ++R+V SS
Sbjct: 57 AAA-MKGCDRVFHLAAFTSL----WAKDRKELYRTNVEGTRNVLDAALEAGVRRVVHTSS 111
Query: 203 VGVTKFN 209
+
Sbjct: 112 IAALGGP 118
|
This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318 |
| >gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 50.3 bits (121), Expect = 1e-07
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 86 LVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLD 145
LV G +G +G VV LL++ L+R+PEKA + ++V +GD +P+ L+
Sbjct: 2 LVTGATGKLGTAVVELLLAKVASVVALVRNPEKAKAFA----ADGVEVRQGDYDDPETLE 57
Query: 146 PAIFEGV 152
A FEGV
Sbjct: 58 RA-FEGV 63
|
TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272 |
| >gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 50.3 bits (121), Expect = 2e-07
Identities = 37/132 (28%), Positives = 51/132 (38%), Gaps = 18/132 (13%)
Query: 84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKAT----TLFGKQDEETLQVCKGD-T 138
LVLV G +G + +V LL K R +R K+ L + L+ D
Sbjct: 1 LVLVTGATGFIASHIVEQLLKAGYKVRGTVRSLSKSAKLKALLKAAGYNDRLEFVIVDDL 60
Query: 139 RNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDW----EGVRNLVSALP--S 192
P D A+ +GV +VI F E EG N++ A
Sbjct: 61 TAPNAWDEAL-KGVDYVIHVASPFPFT------GPDAEDDVIDPAVEGTLNVLEAAKAAG 113
Query: 193 SLKRIVLVSSVG 204
S+KR+VL SSV
Sbjct: 114 SVKRVVLTSSVA 125
|
This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301 |
| >gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 49.6 bits (119), Expect = 3e-07
Identities = 32/125 (25%), Positives = 55/125 (44%), Gaps = 9/125 (7%)
Query: 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK 142
+V V G +G +G+ VV L R + + R A L D + + D R+ +
Sbjct: 1 MVVTVFGATGFIGRYVVNRLAKRGSQVIVPYRCEAYARRLLVMGDLGQVLFVEFDLRDDE 60
Query: 143 DLDPAIFEGVTHVICCTGTTAFPSRRWDGDN-TPEKVDWEGVRNLVS-ALPSSLKRIVLV 200
+ A+ EG VI G R ++ N + E V EG L A + ++R++ +
Sbjct: 61 SIRKAL-EGSDVVINLVG------RLYETKNFSFEDVHVEGPERLAKAAKEAGVERLIHI 113
Query: 201 SSVGV 205
S++G
Sbjct: 114 SALGA 118
|
This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273 |
| >gnl|CDD|178748 PLN03209, PLN03209, translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Score = 48.4 bits (115), Expect = 9e-07
Identities = 56/216 (25%), Positives = 88/216 (40%), Gaps = 29/216 (13%)
Query: 9 TSIPNLPFP---LIKFPKHHQSLPLFSLAPPTISSRFKTVSSSKARPSSSTVVVHAVQEE 65
T+IP + K H Q L + S + +++ KA+ S +T A E
Sbjct: 12 TTIPTSLTKCGFIEKPFLHGQLLRFPGFSKHPHSRKLRSLDI-KAQASGATKFSSAAIE- 69
Query: 66 VVQTPNSDSKVTPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF-- 123
+ K L VAG +G VG V LL + R +R ++A +L
Sbjct: 70 ------AIPKELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQS 123
Query: 124 ---------GKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNT 174
G Q E L++ + D P + PA+ + VICC G S + D T
Sbjct: 124 VKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPAL-GNASVVICCIGA----SEKEVFDVT 178
Query: 175 -PEKVDWEGVRNLVSALPSS-LKRIVLVSSVGVTKF 208
P ++D+ +NLV A + + +LV+S+G K
Sbjct: 179 GPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKV 214
|
Length = 576 |
| >gnl|CDD|177093 CHL00194, ycf39, Ycf39; Provisional | Back alignment and domain information |
|---|
Score = 46.9 bits (112), Expect = 2e-06
Identities = 35/129 (27%), Positives = 64/129 (49%), Gaps = 12/129 (9%)
Query: 85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
+LV G +G +G+ +V L + R L+R+ KA+ L E ++ GD P+ L
Sbjct: 3 LLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFL----KEWGAELVYGDLSLPETL 58
Query: 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLV-SALPSSLKRIVLVSSV 203
P+ F+GVT +I T+ R +++DW+G L+ +A + +KR + S +
Sbjct: 59 PPS-FKGVTAIID-ASTS-----RPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSIL 111
Query: 204 GVTKFNELP 212
++ +P
Sbjct: 112 NAEQYPYIP 120
|
Length = 317 |
| >gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 46.9 bits (111), Expect = 2e-06
Identities = 30/128 (23%), Positives = 47/128 (36%), Gaps = 14/128 (10%)
Query: 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK 142
+LV GG+G +G +V LL+ R L R + ++ D +
Sbjct: 1 MRILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGL-----DPLLSGVEFVVLDLTDRD 55
Query: 143 DLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWE----GVRNLV-SALPSSLKRI 197
+D VI A S D + + + G NL+ +A + +KR
Sbjct: 56 LVDELAKGVPDAVIHL----AAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRF 111
Query: 198 VLVSSVGV 205
V SSV V
Sbjct: 112 VFASSVSV 119
|
Length = 314 |
| >gnl|CDD|187536 cd05193, AR_like_SDR_e, aldehyde reductase, flavonoid reductase, and related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 45.3 bits (107), Expect = 6e-06
Identities = 43/136 (31%), Positives = 54/136 (39%), Gaps = 16/136 (11%)
Query: 85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP---EKATTLFGKQDEET-LQVCKGDTRN 140
VLV G SG V VV LL R K R +RDP +K L + L++ D +
Sbjct: 1 VLVTGASGFVASHVVEQLLERGYKVRATVRDPSKVKKVNHLLDLDAKPGRLELAVADLTD 60
Query: 141 PKDLDPAI--FEGVTHVICCTGTTAFPSRRWDGD-NTPEKVDWEGVRNLVSALPS--SLK 195
+ D I GV HV A P D N K G N + A + S+K
Sbjct: 61 EQSFDEVIKGCAGVFHV-------ATPVSFSSKDPNEVIKPAIGGTLNALKAAAAAKSVK 113
Query: 196 RIVLVSSVGVTKFNEL 211
R VL SS G +
Sbjct: 114 RFVLTSSAGSVLIPKP 129
|
This subgroup contains aldehyde reductase and flavonoid reductase of the extended SDR-type and related proteins. Proteins in this subgroup have a complete SDR-type active site tetrad and a close match to the canonical extended SDR NADP-binding motif. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 295 |
| >gnl|CDD|187560 cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 45.0 bits (107), Expect = 7e-06
Identities = 34/126 (26%), Positives = 50/126 (39%), Gaps = 14/126 (11%)
Query: 83 KLVLVAGGSGGVGQLVVASLLSRNIKSR--LLLRDPEKATTLFGKQDEETLQVCKGDTRN 140
K LV G +G VG+ ++ LL S+ ++R K L D
Sbjct: 1 KTALVLGATGLVGKHLLRELLKSPYYSKVTAIVRRKLTFPEAKEK-----LVQIVVDFER 55
Query: 141 PKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTP-EKVDWEGVRNLVS-ALPSSLKRIV 198
+ A F+ CC GTT R+ G KVD + V L A + ++ +
Sbjct: 56 LDEYLEA-FQNPDVGFCCLGTT----RKKAGSQENFRKVDHDYVLKLAKLAKAAGVQHFL 110
Query: 199 LVSSVG 204
LVSS+G
Sbjct: 111 LVSSLG 116
|
Atypical SDRs in this subgroup include CC3 (also known as TIP30) which is implicated in tumor suppression. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine rich NAD(P)-binding motif that resembles the extended SDRs, and have an active site triad of the SDRs (YXXXK and upstream Ser), although the upstream Asn of the usual SDR active site is substituted with Asp. For CC3, the Tyr of the triad is displaced compared to the usual SDRs and the protein is monomeric, both these observations suggest that the usual SDR catalytic activity is not present. NADP appears to serve an important role as a ligand, and may be important in the interaction with other macromolecules. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 214 |
| >gnl|CDD|187661 cd08958, FR_SDR_e, flavonoid reductase (FR), extended (e) SDRs | Back alignment and domain information |
|---|
Score = 45.3 bits (108), Expect = 7e-06
Identities = 40/132 (30%), Positives = 54/132 (40%), Gaps = 21/132 (15%)
Query: 85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATT------LFGKQDEETLQVCKGDT 138
V V G SG +G +V LL R R +RDP L G +E L++ K D
Sbjct: 1 VCVTGASGFIGSWLVKRLLQRGYTVRATVRDPGDEKKVAHLLELEG--AKERLKLFKADL 58
Query: 139 RNPKDLDPAI--FEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWE--GVRNLVSA--LPS 192
+ D AI +GV H A P D E ++ G N++ A
Sbjct: 59 LDYGSFDAAIDGCDGVFH-------VASPVDFDSEDPEEEMIEPAVKGTLNVLEACAKAK 111
Query: 193 SLKRIVLVSSVG 204
S+KR+V SSV
Sbjct: 112 SVKRVVFTSSVA 123
|
This subgroup contains FRs of the extended SDR-type and related proteins. These FRs act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites; they have the characteristic active site triad of the SDRs (though not the upstream active site Asn) and a NADP-binding motif that is very similar to the typical extended SDR motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|187673 cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD(P)H steroid dehydrogenase-like protein)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 45.0 bits (107), Expect = 8e-06
Identities = 37/130 (28%), Positives = 54/130 (41%), Gaps = 23/130 (17%)
Query: 85 VLVAGGSGGVGQLVVASLLSRNIKS-------RLLLRDPEKATTLFGKQDEETLQVCKGD 137
LV GGSG +G+ +V LL R + DP +Q GD
Sbjct: 2 CLVVGGSGFLGRHLVEQLLRRGNPTVHVFDIRPTFELDP---------SSSGRVQFHTGD 52
Query: 138 TRNPKDLDPAI-FEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSA-LPSSLK 195
+P+DL+ A +G V TA P D+ KV+ +G RN++ A +K
Sbjct: 53 LTDPQDLEKAFNEKGPNVVF----HTASPDHG-SNDDLYYKVNVQGTRNVIEACRKCGVK 107
Query: 196 RIVLVSSVGV 205
++V SS V
Sbjct: 108 KLVYTSSASV 117
|
This subgroup includes human NSDHL and related proteins. These proteins have the characteristic active site tetrad of extended SDRs, and also have a close match to their NAD(P)-binding motif. Human NSDHL is a 3beta-hydroxysteroid dehydrogenase (3 beta-HSD) which functions in the cholesterol biosynthetic pathway. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Mutations in the gene encoding NSDHL cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. This subgroup also includes an unusual bifunctional [3beta-hydroxysteroid dehydrogenase (3b-HSD)/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 335 |
| >gnl|CDD|187569 cd05259, PCBER_SDR_a, phenylcoumaran benzylic ether reductase (PCBER) like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 43.4 bits (103), Expect = 3e-05
Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
Query: 85 VLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD 143
+ +AG +G +G +V++LL+ +L R ++ F ++V D + +
Sbjct: 2 IAIAGATGTLGGPIVSALLASPGFTVTVLTRPSSTSSNEF---QPSGVKVVPVDYASHES 58
Query: 144 LDPAIFEGVTHVICCTGTTAFPS 166
L A +GV VI G A
Sbjct: 59 LV-AALKGVDAVISALGGAAIGD 80
|
PCBER and pinoresinol-lariciresinol reductases are NADPH-dependent aromatic alcohol reductases, and are atypical members of the SDR family. Other proteins in this subgroup are identified as eugenol synthase. These proteins contain an N-terminus characteristic of NAD(P)-binding proteins and a small C-terminal domain presumed to be involved in substrate binding, but they do not have the conserved active site Tyr residue typically found in SDRs. Numerous other members have unknown functions. The glycine rich NADP-binding motif in this subgroup is of 2 forms: GXGXXG and G[GA]XGXXG; it tends to be atypical compared with the forms generally seen in classical or extended SDRs. The usual SDR active site tetrad is not present, but a critical active site Lys at the usual SDR position has been identified in various members, though other charged and polar residues are found at this position in this subgroup. Atypical SDR-related proteins retain the Rossmann fold of the SDRs, but have limited sequence identity and generally lack the catalytic properties of the archetypical members. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 282 |
| >gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family | Back alignment and domain information |
|---|
Score = 43.1 bits (102), Expect = 3e-05
Identities = 32/124 (25%), Positives = 56/124 (45%), Gaps = 9/124 (7%)
Query: 86 LVAGGSGGVGQLVVASLLSRNIKS--RLL-LRDPEKATTLFGKQDEETLQVCKGDTRNPK 142
LV GG G +G+ +V LL R+ LR + F K + + +GD + +
Sbjct: 1 LVTGGGGFLGRHIVRLLLREGELQEVRVFDLRFSPELLEDFSKL--QVITYIEGDVTDKQ 58
Query: 143 DLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSA-LPSSLKRIVLVS 201
DL A+ +G VI +T KV+ +G +N++ A + + ++ +V S
Sbjct: 59 DLRRAL-QGSDVVIHTAA--IIDVFGKAYRDTIMKVNVKGTQNVLDACVKAGVRVLVYTS 115
Query: 202 SVGV 205
S+ V
Sbjct: 116 SMEV 119
|
The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280 |
| >gnl|CDD|178484 PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 43.3 bits (102), Expect = 4e-05
Identities = 39/129 (30%), Positives = 59/129 (45%), Gaps = 16/129 (12%)
Query: 87 VAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDE-ETLQVCKGDTRNPKDLD 145
V G +G +G +V LL R LRDP K+ L K E + L++ + D + D
Sbjct: 15 VTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFD 74
Query: 146 PAI--FEGVTHVICCTGTTAFPSRRWDGDNTPEKVD-------WEGVRNLV-SALPS-SL 194
A+ +GV HV + F D +N E V +G N++ S L S ++
Sbjct: 75 EAVKGCDGVFHV---AASMEF-DVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTV 130
Query: 195 KRIVLVSSV 203
KR+V SS+
Sbjct: 131 KRVVFTSSI 139
|
Length = 353 |
| >gnl|CDD|178263 PLN02657, PLN02657, 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 5e-05
Identities = 45/193 (23%), Positives = 71/193 (36%), Gaps = 16/193 (8%)
Query: 25 HQSLPLFSL--APPTISSRFKTVSSSKARPSSSTVVVHAVQEEVVQTPNSDSKVTPASSS 82
H S LFSL A SS +++S + + S +
Sbjct: 1 HLSSSLFSLRAAAAASSSPSNRLAASLGGALVRRAAAASRGSRATAAAAAQSFRSKEPKD 60
Query: 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDE----ETLQVCKGDT 138
VLV G +G +G+ VV L+ R + R+ GK+D +V GD
Sbjct: 61 VTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDV 120
Query: 139 RNPKDLDPAIFE---GVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRN-LVSALPSSL 194
+ L +F V V+ C + R G K+D++ +N L +
Sbjct: 121 TDADSLRKVLFSEGDPVDVVVSCL------ASRTGGVKDSWKIDYQATKNSLDAGREVGA 174
Query: 195 KRIVLVSSVGVTK 207
K VL+S++ V K
Sbjct: 175 KHFVLLSAICVQK 187
|
Length = 390 |
| >gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 5e-05
Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 15/126 (11%)
Query: 85 VLVAGGSGGVGQLVVASLLSRN-IKSRLL-LRDPEKATTLFGKQDEETLQVCKGDTRNPK 142
VLV GGSG G+ +V LL R R + P +A + + + ++ KGD +
Sbjct: 2 VLVTGGSGFFGERLVKQLLERGGTYVRSFDIAPPGEALSAWQHPN---IEFLKGDITDRN 58
Query: 143 DLDPAIFEGVTHVICCT--GTTAFPSRRWDGDNTPEKVDWEGVRNLVSA-LPSSLKRIVL 199
D++ A+ G V A P + +V+ G +N++ A +++ V
Sbjct: 59 DVEQAL-SGADCVFHTAAIVPLAGPRDLYW------EVNVGGTQNVLDACQRCGVQKFVY 111
Query: 200 VSSVGV 205
SS V
Sbjct: 112 TSSSSV 117
|
Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331 |
| >gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family | Back alignment and domain information |
|---|
Score = 40.3 bits (95), Expect = 3e-04
Identities = 28/124 (22%), Positives = 48/124 (38%), Gaps = 10/124 (8%)
Query: 85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
+LV GG+G +G +V LL + +L R + G+ +GD +P L
Sbjct: 1 ILVTGGTGFIGSHLVRRLLQEGYEVIVLGRRRRSESLNTGRIR-----FHEGDLTDPDAL 55
Query: 145 DPAIFEGV--THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSS-LKRIVLVS 201
+ + V VI + ++ + + G L+ A + +KR V S
Sbjct: 56 E-RLLAEVQPDAVIHLAAQSGVG-ASFEDPADFIRANVLGTLRLLEAARRAGVKRFVFAS 113
Query: 202 SVGV 205
S V
Sbjct: 114 SSEV 117
|
This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233 |
| >gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 40.0 bits (94), Expect = 4e-04
Identities = 32/140 (22%), Positives = 50/140 (35%), Gaps = 22/140 (15%)
Query: 85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQ----VCKGDTRN 140
V V GG+G +G+ +V LL K +L+R ++ V +GD
Sbjct: 1 VFVTGGTGFLGRHLVKRLLENGFKVLVLVRSESLGEAHERIEEAGLEADRVRVLEGDLTQ 60
Query: 141 PK-DLDPAIF----EGVTHVICCTGTTAFPSRRWDGDNTPEKVDW----EGVRNLVSALP 191
P L A V HVI C + F P + W +G +++
Sbjct: 61 PNLGLSAAASRELAGKVDHVIHCAASYDF--------QAPNEDAWRTNIDGTEHVLELAA 112
Query: 192 SS-LKRIVLVSSVGVTKFNE 210
++R VS+ V E
Sbjct: 113 RLDIQRFHYVSTAYVAGNRE 132
|
This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|187540 cd05229, SDR_a3, atypical (a) SDRs, subgroup 3 | Back alignment and domain information |
|---|
Score = 40.0 bits (94), Expect = 5e-04
Identities = 26/119 (21%), Positives = 44/119 (36%), Gaps = 16/119 (13%)
Query: 85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
V G SG +G+ V L R RL+ R K L +++ D + +
Sbjct: 2 AHVLGASGPIGREVARELRRRGWDVRLVSRSGSKLAWL------PGVEIVAADAMDASSV 55
Query: 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSV 203
A G + C RW+ P + N+V+A ++ ++VL +V
Sbjct: 56 IAAA-RGADVIYHCANP---AYTRWEELFPPL------MENVVAAAEANGAKLVLPGNV 104
|
These atypical SDR family members of unknown function have a glycine-rich NAD(P)-binding motif consensus that is very similar to the extended SDRs, GXXGXXG. Generally, this group has poor conservation of the active site tetrad, However, individual sequences do contain matches to the YXXXK active site motif, and generally Tyr or Asn in place of the upstream Ser found in most SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 302 |
| >gnl|CDD|178268 PLN02662, PLN02662, cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Score = 39.3 bits (92), Expect = 7e-04
Identities = 41/144 (28%), Positives = 59/144 (40%), Gaps = 21/144 (14%)
Query: 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP------EKATTLFGKQDEETLQVC 134
K+V V G SG + +V LL R + +RDP E L G + E L +
Sbjct: 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAK--ERLHLF 60
Query: 135 KGDTRNPKDLDPAI--FEGVTHVICCTGTTAFPSRRWDGDNTPEKVD--WEGVRNLVS-- 188
K + D + EGV H TA P D E +D +G N++
Sbjct: 61 KANLLEEGSFDSVVDGCEGVFH-------TASPFYHDVTDPQAELIDPAVKGTLNVLRSC 113
Query: 189 ALPSSLKRIVLVSSVGVTKFNELP 212
A S+KR+V+ SS+ +N P
Sbjct: 114 AKVPSVKRVVVTSSMAAVAYNGKP 137
|
Length = 322 |
| >gnl|CDD|215100 PLN00198, PLN00198, anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Score = 39.5 bits (92), Expect = 7e-04
Identities = 37/135 (27%), Positives = 57/135 (42%), Gaps = 8/135 (5%)
Query: 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE---KATTLFGKQDEETLQVCKGDT 138
K V GG+G + L++ LL + +RDPE K L Q+ L++ D
Sbjct: 9 KKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADL 68
Query: 139 RNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL--PSSLKR 196
+ + + A G V F S D +N K +GV N++ A S+KR
Sbjct: 69 TDEESFE-APIAGCDLVFHVATPVNFASE--DPENDMIKPAIQGVHNVLKACAKAKSVKR 125
Query: 197 IVLVSSVGVTKFNEL 211
++L SS N+L
Sbjct: 126 VILTSSAAAVSINKL 140
|
Length = 338 |
| >gnl|CDD|187576 cd05266, SDR_a4, atypical (a) SDRs, subgroup 4 | Back alignment and domain information |
|---|
Score = 38.8 bits (91), Expect = 0.001
Identities = 26/119 (21%), Positives = 42/119 (35%), Gaps = 22/119 (18%)
Query: 90 GSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLD-PAI 148
G G +GQ + LL++ + R PEK DL P +
Sbjct: 5 GCGYLGQRLARQLLAQGWQVTGTTRSPEKLAADRPAGVTPLAA----------DLTQPGL 54
Query: 149 FEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS--SLKRIVLVSSVGV 205
V H++ P G+R L+ AL +++R++ +SS GV
Sbjct: 55 LADVDHLVISLP----PPAGSYRGGYDP-----GLRALLDALAQLPAVQRVIYLSSTGV 104
|
Atypical SDRs in this subgroup are poorly defined, one member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is related to, but is different from, the archetypical SDRs, GXGXXG. This subgroup also lacks most of the characteristic active site residues of the SDRs; however, the upstream Ser is present at the usual place, and some potential catalytic residues are present in place of the usual YXXXK active site motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 251 |
| >gnl|CDD|187582 cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatty acid synthase (FAS), complex (x) SDRs | Back alignment and domain information |
|---|
Score = 38.9 bits (91), Expect = 0.001
Identities = 34/155 (21%), Positives = 46/155 (29%), Gaps = 22/155 (14%)
Query: 67 VQTPNSDSKVTPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLL--RDPEKATTLFG 124
+ P L+ GG GG+G LV L +R + L+L R
Sbjct: 135 APAAALELAAAPGGLDGTYLITGGLGGLGLLVARWLAARGAR-HLVLLSRRGPAPRAAAR 193
Query: 125 KQDEE----TLQVCKGDTRNPKDLDPAIFE-----GVTHVICCTGTTAFPSRRWDGDNTP 175
+ V + D +P L + E + VI G + TP
Sbjct: 194 AALLRAGGARVSVVRCDVTDPAALAALLAELAAGGPLAGVIHAAGVLRDALLA---ELTP 250
Query: 176 EKVD------WEGVRNLVSALP-SSLKRIVLVSSV 203
G NL P L VL SSV
Sbjct: 251 AAFAAVLAAKVAGALNLHELTPDLPLDFFVLFSSV 285
|
Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. In some instances, such as porcine FAS, an enoyl reductase (ER) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consist of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthase uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-KR, forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-ER. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 375 |
| >gnl|CDD|191263 pfam05368, NmrA, NmrA-like family | Back alignment and domain information |
|---|
Score = 38.4 bits (90), Expect = 0.001
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 5/77 (6%)
Query: 85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTL-FGKQDEETLQVCKGDTRNPKD 143
+LV G +G G VV + L R L+RDP+ E ++ GD + +
Sbjct: 1 ILVFGATGYQGGSVVRASLKAGHPVRALVRDPKSELAKSLKAAGVELVE---GDLDDHES 57
Query: 144 LDPAIFEGVTHVICCTG 160
L A +GV V TG
Sbjct: 58 LVEA-LKGVDVVFSVTG 73
|
NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families. Length = 232 |
| >gnl|CDD|187542 cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcriptional regulator) and triphenylmethane reductase (TMR) like proteins, subgroup 1, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 38.8 bits (91), Expect = 0.001
Identities = 35/124 (28%), Positives = 49/124 (39%), Gaps = 18/124 (14%)
Query: 85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
+LV G +G +G V +LL R L+R E+A L + E V GD +P L
Sbjct: 1 ILVTGATGRIGSKVATTLLEAGRPVRALVRSDERAAALAARGAE----VVVGDLDDPAVL 56
Query: 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDW--EGVRNLVSALPSS-LKRIVLVS 201
A GV V T + + SAL + +KR+V +S
Sbjct: 57 AAA-LAGVDAVFFLA----------PPAPTADARPGYVQAAEAFASALREAGVKRVVNLS 105
Query: 202 SVGV 205
SVG
Sbjct: 106 SVGA 109
|
Atypical SDRs related to NMRa, TMR, and HSCARG (an NADPH sensor). This subgroup resembles the SDRs and has a partially conserved characteristic [ST]GXXGXXG NAD-binding motif, but lacks the conserved active site residues. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 259 |
| >gnl|CDD|187553 cd05242, SDR_a8, atypical (a) SDRs, subgroup 8 | Back alignment and domain information |
|---|
Score = 38.4 bits (90), Expect = 0.001
Identities = 32/125 (25%), Positives = 49/125 (39%), Gaps = 15/125 (12%)
Query: 85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
+++ GG+G +G+ + L + + +L R P KA G + T L
Sbjct: 2 IVITGGTGFIGRALTRRLTAAGHEVVVLSRRPGKAE---GLAEVITWD--------GLSL 50
Query: 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVD--WEGVRNLVSALPSSLKR-IVLVS 201
P G VI G RRW N E + E R LV A+ ++ VL+S
Sbjct: 51 GPWELPGADAVINLAGEPIA-CRRWTEANKKEILSSRIESTRVLVEAIANAPAPPKVLIS 109
Query: 202 SVGVT 206
+ V
Sbjct: 110 ASAVG 114
|
This subgroup contains atypical SDRs of unknown function. Proteins in this subgroup have a glycine-rich NAD(P)-binding motif consensus that resembles that of the extended SDRs, (GXXGXXG or GGXGXXG), but lacks the characteristic active site residues of the SDRs. A Cys often replaces the usual Lys of the YXXXK active site motif, while the upstream Ser is generally present and Arg replaces the usual Asn. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 296 |
| >gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1 | Back alignment and domain information |
|---|
Score = 38.0 bits (89), Expect = 0.002
Identities = 24/121 (19%), Positives = 44/121 (36%), Gaps = 22/121 (18%)
Query: 85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
+L+ GG+ +G+ +V LL+ + R K E + GD + L
Sbjct: 3 ILIIGGTRFIGKALVEELLAAGHDVTVFNRGRTKPDL-----PEGVEHI-VGDRNDRDAL 56
Query: 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVG 204
+ + V+ T A+ TP +V + A +K+ + +SS
Sbjct: 57 EELLGGEDFDVVV--DTIAY---------TPRQV-----ERALDAFKGRVKQYIFISSAS 100
Query: 205 V 205
V
Sbjct: 101 V 101
|
Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250 |
| >gnl|CDD|187561 cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 37.3 bits (87), Expect = 0.003
Identities = 26/72 (36%), Positives = 34/72 (47%), Gaps = 8/72 (11%)
Query: 85 VLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEK--ATTLFGKQDEETLQVCKGDTRNP 141
+LV G +G G VV +LL K R L RDP A L E V +GD +P
Sbjct: 1 ILVFGATGKQGGSVVRALLKDPGFKVRALTRDPSSPAAKALAAPGVE----VVQGDLDDP 56
Query: 142 KDLDPAIFEGVT 153
+ L+ A +GV
Sbjct: 57 ESLEAA-LKGVY 67
|
NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 242 |
| >gnl|CDD|178256 PLN02650, PLN02650, dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Score = 37.5 bits (87), Expect = 0.003
Identities = 41/138 (29%), Positives = 56/138 (40%), Gaps = 9/138 (6%)
Query: 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP---EKATTLFGKQDEET-LQVC 134
S + V V G SG +G +V LL R R +RDP +K L T L +
Sbjct: 2 GSQKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLW 61
Query: 135 KGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSS- 193
K D D AI G T V F S+ D +N K G+ +++ A +
Sbjct: 62 KADLAVEGSFDDAI-RGCTGVFHVATPMDFESK--DPENEVIKPTVNGMLSIMKACAKAK 118
Query: 194 -LKRIVLVSSVGVTKFNE 210
++RIV SS G E
Sbjct: 119 TVRRIVFTSSAGTVNVEE 136
|
Length = 351 |
| >gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR | Back alignment and domain information |
|---|
Score = 37.0 bits (86), Expect = 0.003
Identities = 22/85 (25%), Positives = 33/85 (38%), Gaps = 10/85 (11%)
Query: 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-ATTLFGKQDEETLQVCKGDTRNP 141
K+ LV G S G+G + +L + L LR+PE A D E + D R+P
Sbjct: 1 KVALVTGASRGIGIEIARALARDGYRVSLGLRNPEDLAALSASGGDVEAVPY---DARDP 57
Query: 142 ------KDLDPAIFEGVTHVICCTG 160
D F + ++ G
Sbjct: 58 EDARALVDALRDRFGRIDVLVHNAG 82
|
This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223 |
| >gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases | Back alignment and domain information |
|---|
Score = 36.3 bits (85), Expect = 0.004
Identities = 37/144 (25%), Positives = 49/144 (34%), Gaps = 34/144 (23%)
Query: 85 VLVAGGSGGVGQLVVASLLSRNIKSRLLL-----RDPEKATTLFGKQDE--ETLQVCKGD 137
L+ GG GG+G +A L+ RL+L D A L + + + V D
Sbjct: 3 YLITGGLGGLG-RALARWLAERGARRLVLLSRSGPDAPGAAALLAELEAAGARVTVVACD 61
Query: 138 TRNPKDLD------PAIFEGVTHVICCTGTTAFPSRRWDG---DNTPE--------KVDW 180
+ L PA+ +T VI G DG TPE K
Sbjct: 62 VADRDALAAVLAAIPAVEGPLTGVIHAAGVLD------DGVLASLTPERFAAVLAPKAA- 114
Query: 181 EGVRNLVSAL-PSSLKRIVLVSSV 203
G NL L VL SS+
Sbjct: 115 -GAWNLHELTADLPLDFFVLFSSI 137
|
It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180 |
| >gnl|CDD|233570 TIGR01777, yfcH, TIGR01777 family protein | Back alignment and domain information |
|---|
Score = 36.8 bits (86), Expect = 0.004
Identities = 27/125 (21%), Positives = 48/125 (38%), Gaps = 15/125 (12%)
Query: 85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
+L+ GG+G +G+ + L R + +L R P + + + L
Sbjct: 1 ILITGGTGFIGRALTQRLTKRGHEVTILTRSPPPGANTKWEGYKP------WAGEDADSL 54
Query: 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVD--WEGVRNLVSALPSSLKRI-VLVS 201
EG VI G +RW + E D + R LV A+ ++ ++ V +S
Sbjct: 55 -----EGADAVINLAGEPIA-DKRWTEERKQEIRDSRIDTTRLLVEAIAAAEQKPKVFIS 108
Query: 202 SVGVT 206
+ V
Sbjct: 109 ASAVG 113
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein [Hypothetical proteins, Conserved]. Length = 291 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 214 | |||
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 99.92 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 99.91 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 99.89 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.85 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 99.85 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 99.84 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 99.84 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 99.82 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 99.82 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 99.82 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 99.82 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 99.82 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 99.82 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 99.81 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 99.81 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.81 | |
| PRK05717 | 255 | oxidoreductase; Validated | 99.81 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 99.81 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 99.81 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 99.81 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 99.81 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 99.81 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.81 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 99.81 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 99.81 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 99.8 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 99.8 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.8 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 99.8 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.8 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 99.8 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.8 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.8 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.8 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 99.8 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 99.79 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 99.79 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.79 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 99.79 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 99.79 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.79 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 99.79 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 99.79 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 99.79 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.79 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.79 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.79 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 99.79 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.79 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.79 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 99.79 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 99.79 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.78 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 99.78 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.78 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.78 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 99.78 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 99.78 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 99.78 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.78 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.78 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.78 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.78 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.78 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 99.78 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 99.78 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 99.78 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 99.78 | |
| PRK08643 | 256 | acetoin reductase; Validated | 99.78 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.78 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 99.78 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.78 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.78 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 99.78 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 99.78 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 99.78 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.77 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.77 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.77 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 99.77 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 99.77 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 99.77 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.77 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 99.77 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 99.77 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 99.77 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 99.77 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 99.77 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.77 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.77 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 99.77 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.76 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 99.76 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 99.76 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 99.76 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 99.76 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.76 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 99.76 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 99.76 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 99.76 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.76 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 99.76 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.75 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.75 | |
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 99.75 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.75 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.75 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 99.75 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.75 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 99.75 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.75 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 99.75 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.75 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.75 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.75 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.75 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.74 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.74 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.74 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.74 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 99.74 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.74 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.74 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 99.74 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 99.74 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 99.74 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.74 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 99.74 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 99.74 | |
| PLN00015 | 308 | protochlorophyllide reductase | 99.74 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 99.73 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.73 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 99.73 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 99.73 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 99.73 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 99.73 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 99.73 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 99.73 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 99.73 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.73 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 99.73 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.73 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 99.73 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.73 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.73 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 99.73 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.73 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 99.72 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 99.72 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.72 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 99.72 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.72 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 99.72 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 99.72 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 99.72 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 99.72 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.72 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 99.72 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.72 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.72 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.71 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 99.71 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 99.71 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.71 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.71 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.71 | |
| KOG4169 | 261 | consensus 15-hydroxyprostaglandin dehydrogenase an | 99.71 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 99.71 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 99.71 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 99.71 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.71 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 99.7 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 99.7 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 99.7 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 99.7 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.7 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 99.7 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.7 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.7 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 99.69 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 99.69 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 99.69 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.69 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 99.68 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 99.68 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 99.68 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 99.68 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.67 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 99.67 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.67 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 99.67 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.67 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 99.66 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 99.66 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 99.66 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 99.66 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.64 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.64 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.63 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 99.63 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.63 | |
| KOG1014 | 312 | consensus 17 beta-hydroxysteroid dehydrogenase typ | 99.63 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.63 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 99.62 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.62 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.62 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 99.61 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 99.6 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 99.6 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 99.58 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.58 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 99.58 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.57 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.57 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.57 | |
| KOG1611 | 249 | consensus Predicted short chain-type dehydrogenase | 99.57 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.56 | |
| KOG1210 | 331 | consensus Predicted 3-ketosphinganine reductase [S | 99.55 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 99.55 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 99.54 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.54 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 99.54 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 99.53 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 99.52 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.51 | |
| KOG1199 | 260 | consensus Short-chain alcohol dehydrogenase/3-hydr | 99.5 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 99.49 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 99.46 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 99.45 | |
| KOG1478 | 341 | consensus 3-keto sterol reductase [Lipid transport | 99.45 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 99.42 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.41 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.4 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.36 | |
| KOG1203 | 411 | consensus Predicted dehydrogenase [Carbohydrate tr | 99.33 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 99.28 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.27 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 99.25 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 99.24 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.21 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 99.18 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 99.15 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 99.07 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 99.04 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 99.02 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 99.0 | |
| KOG1204 | 253 | consensus Predicted dehydrogenase [Secondary metab | 98.99 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 98.96 | |
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 98.87 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 98.84 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 98.84 | |
| KOG4039 | 238 | consensus Serine/threonine kinase TIP30/CC3 [Signa | 98.84 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 98.83 | |
| TIGR02114 | 227 | coaB_strep phosphopantothenate--cysteine ligase, s | 98.8 | |
| PLN00106 | 323 | malate dehydrogenase | 98.79 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 98.77 | |
| PRK06732 | 229 | phosphopantothenate--cysteine ligase; Validated | 98.71 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 98.69 | |
| PRK09620 | 229 | hypothetical protein; Provisional | 98.67 | |
| COG0623 | 259 | FabI Enoyl-[acyl-carrier-protein] | 98.6 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 98.58 | |
| TIGR00521 | 390 | coaBC_dfp phosphopantothenoylcysteine decarboxylas | 98.55 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 98.52 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 98.51 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 98.5 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 98.5 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 98.48 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 98.4 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 98.34 | |
| KOG2733 | 423 | consensus Uncharacterized membrane protein [Functi | 98.17 | |
| cd00704 | 323 | MDH Malate dehydrogenase. Malate dehydrogenase (MD | 98.16 | |
| PF00056 | 141 | Ldh_1_N: lactate/malate dehydrogenase, NAD binding | 98.14 | |
| TIGR01758 | 324 | MDH_euk_cyt malate dehydrogenase, NAD-dependent. T | 98.13 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 98.13 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 98.08 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 98.05 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 98.04 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 97.97 | |
| PF04127 | 185 | DFP: DNA / pantothenate metabolism flavoprotein; I | 97.96 | |
| PRK00066 | 315 | ldh L-lactate dehydrogenase; Reviewed | 97.95 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 97.93 | |
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 97.93 | |
| PLN02520 | 529 | bifunctional 3-dehydroquinate dehydratase/shikimat | 97.92 | |
| PRK02472 | 447 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 97.89 | |
| cd05291 | 306 | HicDH_like L-2-hydroxyisocapronate dehydrogenases | 97.83 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 97.83 | |
| cd01075 | 200 | NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l | 97.82 | |
| cd05294 | 309 | LDH-like_MDH_nadp A lactate dehydrogenases-like st | 97.81 | |
| PLN02968 | 381 | Probable N-acetyl-gamma-glutamyl-phosphate reducta | 97.79 | |
| COG3268 | 382 | Uncharacterized conserved protein [Function unknow | 97.66 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 97.65 | |
| PRK10669 | 558 | putative cation:proton antiport protein; Provision | 97.64 | |
| COG0169 | 283 | AroE Shikimate 5-dehydrogenase [Amino acid transpo | 97.63 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 97.62 | |
| PRK12549 | 284 | shikimate 5-dehydrogenase; Reviewed | 97.6 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 97.59 | |
| PRK09310 | 477 | aroDE bifunctional 3-dehydroquinate dehydratase/sh | 97.58 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 97.58 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 97.57 | |
| TIGR01809 | 282 | Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO | 97.56 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 97.54 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 97.54 | |
| cd01337 | 310 | MDH_glyoxysomal_mitochondrial Glyoxysomal and mito | 97.54 | |
| COG2130 | 340 | Putative NADP-dependent oxidoreductases [General f | 97.53 | |
| cd08266 | 342 | Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam | 97.52 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 97.52 | |
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 97.48 | |
| cd01338 | 322 | MDH_choloroplast_like Chloroplast-like malate dehy | 97.47 | |
| PRK03659 | 601 | glutathione-regulated potassium-efflux system prot | 97.43 | |
| cd08293 | 345 | PTGR2 Prostaglandin reductase. Prostaglandins and | 97.4 | |
| TIGR01759 | 323 | MalateDH-SF1 malate dehydrogenase. This model repr | 97.4 | |
| PRK03562 | 621 | glutathione-regulated potassium-efflux system prot | 97.39 | |
| cd08259 | 332 | Zn_ADH5 Alcohol dehydrogenases of the MDR family. | 97.38 | |
| PRK06223 | 307 | malate dehydrogenase; Reviewed | 97.37 | |
| PF00899 | 135 | ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a | 97.37 | |
| PRK05442 | 326 | malate dehydrogenase; Provisional | 97.37 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 97.36 | |
| cd00650 | 263 | LDH_MDH_like NAD-dependent, lactate dehydrogenase- | 97.36 | |
| PTZ00117 | 319 | malate dehydrogenase; Provisional | 97.34 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 97.34 | |
| PRK14874 | 334 | aspartate-semialdehyde dehydrogenase; Provisional | 97.34 | |
| PLN03154 | 348 | putative allyl alcohol dehydrogenase; Provisional | 97.34 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 97.34 | |
| TIGR02825 | 325 | B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 | 97.34 | |
| COG0039 | 313 | Mdh Malate/lactate dehydrogenases [Energy producti | 97.33 | |
| PRK14027 | 283 | quinate/shikimate dehydrogenase; Provisional | 97.32 | |
| cd08294 | 329 | leukotriene_B4_DH_like 13-PGR is a bifunctional en | 97.3 | |
| PRK12749 | 288 | quinate/shikimate dehydrogenase; Reviewed | 97.3 | |
| PLN02602 | 350 | lactate dehydrogenase | 97.29 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 97.29 | |
| PLN00203 | 519 | glutamyl-tRNA reductase | 97.28 | |
| cd05293 | 312 | LDH_1 A subgroup of L-lactate dehydrogenases. L-la | 97.25 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 97.24 | |
| cd00757 | 228 | ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 | 97.24 | |
| cd08253 | 325 | zeta_crystallin Zeta-crystallin with NADP-dependen | 97.23 | |
| TIGR01772 | 312 | MDH_euk_gproteo malate dehydrogenase, NAD-dependen | 97.23 | |
| PLN00112 | 444 | malate dehydrogenase (NADP); Provisional | 97.22 | |
| cd01484 | 234 | E1-2_like Ubiquitin activating enzyme (E1), repeat | 97.19 | |
| PRK14192 | 283 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.16 | |
| PRK13982 | 475 | bifunctional SbtC-like/phosphopantothenoylcysteine | 97.14 | |
| TIGR01915 | 219 | npdG NADPH-dependent F420 reductase. This model re | 97.14 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 97.14 | |
| COG1064 | 339 | AdhP Zn-dependent alcohol dehydrogenases [General | 97.12 | |
| KOG1198 | 347 | consensus Zinc-binding oxidoreductase [Energy prod | 97.09 | |
| cd05292 | 308 | LDH_2 A subgroup of L-lactate dehydrogenases. L-la | 97.09 | |
| cd00300 | 300 | LDH_like L-lactate dehydrogenase-like enzymes. Mem | 97.09 | |
| PRK05690 | 245 | molybdopterin biosynthesis protein MoeB; Provision | 97.08 | |
| PRK08762 | 376 | molybdopterin biosynthesis protein MoeB; Validated | 97.07 | |
| cd05295 | 452 | MDH_like Malate dehydrogenase-like. These MDH-like | 97.07 | |
| PTZ00082 | 321 | L-lactate dehydrogenase; Provisional | 97.06 | |
| PRK08644 | 212 | thiamine biosynthesis protein ThiF; Provisional | 97.05 | |
| TIGR01757 | 387 | Malate-DH_plant malate dehydrogenase, NADP-depende | 97.04 | |
| cd05276 | 323 | p53_inducible_oxidoreductase PIG3 p53-inducible qu | 97.03 | |
| PRK08655 | 437 | prephenate dehydrogenase; Provisional | 97.02 | |
| cd01483 | 143 | E1_enzyme_family Superfamily of activating enzymes | 97.01 | |
| KOG4288 | 283 | consensus Predicted oxidoreductase [General functi | 97.01 | |
| PRK00436 | 343 | argC N-acetyl-gamma-glutamyl-phosphate reductase; | 96.98 | |
| PRK15116 | 268 | sulfur acceptor protein CsdL; Provisional | 96.97 | |
| cd05288 | 329 | PGDH Prostaglandin dehydrogenases. Prostaglandins | 96.96 | |
| PRK05597 | 355 | molybdopterin biosynthesis protein MoeB; Validated | 96.96 | |
| TIGR01763 | 305 | MalateDH_bact malate dehydrogenase, NAD-dependent. | 96.96 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 96.95 | |
| TIGR02355 | 240 | moeB molybdopterin synthase sulfurylase MoeB. This | 96.95 | |
| PRK10537 | 393 | voltage-gated potassium channel; Provisional | 96.92 | |
| PRK06849 | 389 | hypothetical protein; Provisional | 96.89 | |
| cd01489 | 312 | Uba2_SUMO Ubiquitin activating enzyme (E1) subunit | 96.89 | |
| PRK01438 | 480 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.87 | |
| PRK06718 | 202 | precorrin-2 dehydrogenase; Reviewed | 96.87 | |
| PLN02928 | 347 | oxidoreductase family protein | 96.85 | |
| PF00670 | 162 | AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase | 96.84 | |
| PRK05476 | 425 | S-adenosyl-L-homocysteine hydrolase; Provisional | 96.83 | |
| cd05188 | 271 | MDR Medium chain reductase/dehydrogenase (MDR)/zin | 96.83 | |
| cd01485 | 198 | E1-1_like Ubiquitin activating enzyme (E1), repeat | 96.83 | |
| PRK08328 | 231 | hypothetical protein; Provisional | 96.81 | |
| KOG1494 | 345 | consensus NAD-dependent malate dehydrogenase [Ener | 96.8 | |
| cd08289 | 326 | MDR_yhfp_like Yhfp putative quinone oxidoreductase | 96.79 | |
| cd08230 | 355 | glucose_DH Glucose dehydrogenase. Glucose dehydrog | 96.78 | |
| PRK15469 | 312 | ghrA bifunctional glyoxylate/hydroxypyruvate reduc | 96.78 | |
| PRK09880 | 343 | L-idonate 5-dehydrogenase; Provisional | 96.78 | |
| PRK08223 | 287 | hypothetical protein; Validated | 96.76 | |
| cd05290 | 307 | LDH_3 A subgroup of L-lactate dehydrogenases. L-la | 96.76 | |
| TIGR02824 | 325 | quinone_pig3 putative NAD(P)H quinone oxidoreducta | 96.75 | |
| cd00401 | 413 | AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado | 96.74 | |
| cd00755 | 231 | YgdL_like Family of activating enzymes (E1) of ubi | 96.73 | |
| PRK12550 | 272 | shikimate 5-dehydrogenase; Reviewed | 96.72 | |
| PRK09424 | 509 | pntA NAD(P) transhydrogenase subunit alpha; Provis | 96.69 | |
| cd08268 | 328 | MDR2 Medium chain dehydrogenases/reductase (MDR)/z | 96.69 | |
| TIGR01470 | 205 | cysG_Nterm siroheme synthase, N-terminal domain. T | 96.68 | |
| cd08250 | 329 | Mgc45594_like Mgc45594 gene product and other MDR | 96.65 | |
| PRK05600 | 370 | thiamine biosynthesis protein ThiF; Validated | 96.64 | |
| PLN02586 | 360 | probable cinnamyl alcohol dehydrogenase | 96.63 | |
| COG0373 | 414 | HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | 96.63 | |
| PRK07878 | 392 | molybdopterin biosynthesis-like protein MoeZ; Vali | 96.63 | |
| TIGR02818 | 368 | adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr | 96.62 | |
| KOG0023 | 360 | consensus Alcohol dehydrogenase, class V [Secondar | 96.62 | |
| COG2085 | 211 | Predicted dinucleotide-binding enzymes [General fu | 96.61 | |
| TIGR02354 | 200 | thiF_fam2 thiamine biosynthesis protein ThiF, fami | 96.6 | |
| PRK06129 | 308 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 96.6 | |
| PRK07574 | 385 | formate dehydrogenase; Provisional | 96.58 | |
| PLN03139 | 386 | formate dehydrogenase; Provisional | 96.57 | |
| PLN02494 | 477 | adenosylhomocysteinase | 96.56 | |
| cd08239 | 339 | THR_DH_like L-threonine dehydrogenase (TDH)-like. | 96.56 | |
| cd08292 | 324 | ETR_like_2 2-enoyl thioester reductase (ETR) like | 96.56 | |
| PTZ00075 | 476 | Adenosylhomocysteinase; Provisional | 96.54 | |
| cd01492 | 197 | Aos1_SUMO Ubiquitin activating enzyme (E1) subunit | 96.53 | |
| cd05311 | 226 | NAD_bind_2_malic_enz NAD(P) binding domain of mali | 96.52 | |
| PF03446 | 163 | NAD_binding_2: NAD binding domain of 6-phosphogluc | 96.51 | |
| PRK12480 | 330 | D-lactate dehydrogenase; Provisional | 96.51 | |
| PLN02178 | 375 | cinnamyl-alcohol dehydrogenase | 96.5 | |
| PF01118 | 121 | Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi | 96.5 | |
| PRK04308 | 445 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.48 | |
| cd01487 | 174 | E1_ThiF_like E1_ThiF_like. Member of superfamily o | 96.47 | |
| cd01339 | 300 | LDH-like_MDH L-lactate dehydrogenase-like malate d | 96.46 | |
| PF03807 | 96 | F420_oxidored: NADP oxidoreductase coenzyme F420-d | 96.45 | |
| cd08270 | 305 | MDR4 Medium chain dehydrogenases/reductase (MDR)/z | 96.45 | |
| TIGR01296 | 339 | asd_B aspartate-semialdehyde dehydrogenase (peptid | 96.45 | |
| PLN02740 | 381 | Alcohol dehydrogenase-like | 96.44 | |
| TIGR00561 | 511 | pntA NAD(P) transhydrogenase, alpha subunit. In so | 96.43 | |
| cd08243 | 320 | quinone_oxidoreductase_like_1 Quinone oxidoreducta | 96.43 | |
| PF02737 | 180 | 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind | 96.41 | |
| PRK14194 | 301 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.4 | |
| TIGR01850 | 346 | argC N-acetyl-gamma-glutamyl-phosphate reductase, | 96.39 | |
| COG4982 | 866 | 3-oxoacyl-[acyl-carrier protein] | 96.38 | |
| cd08281 | 371 | liver_ADH_like1 Zinc-dependent alcohol dehydrogena | 96.36 | |
| PRK07411 | 390 | hypothetical protein; Validated | 96.35 | |
| cd08244 | 324 | MDR_enoyl_red Possible enoyl reductase. Member ide | 96.35 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 96.33 | |
| TIGR00936 | 406 | ahcY adenosylhomocysteinase. This enzyme hydrolyze | 96.33 | |
| cd08238 | 410 | sorbose_phosphate_red L-sorbose-1-phosphate reduct | 96.28 | |
| cd08241 | 323 | QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t | 96.27 | |
| TIGR03366 | 280 | HpnZ_proposed putative phosphonate catabolism asso | 96.26 | |
| PRK05671 | 336 | aspartate-semialdehyde dehydrogenase; Reviewed | 96.26 | |
| PRK13256 | 226 | thiopurine S-methyltransferase; Reviewed | 96.25 | |
| PF03721 | 185 | UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen | 96.25 | |
| cd05286 | 320 | QOR2 Quinone oxidoreductase (QOR). Quinone oxidore | 96.22 | |
| cd05211 | 217 | NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of | 96.22 | |
| cd05191 | 86 | NAD_bind_amino_acid_DH NAD(P) binding domain of am | 96.22 | |
| PRK14188 | 296 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.21 | |
| TIGR02817 | 336 | adh_fam_1 zinc-binding alcohol dehydrogenase famil | 96.17 | |
| cd08301 | 369 | alcohol_DH_plants Plant alcohol dehydrogenase. NAD | 96.15 | |
| PRK06719 | 157 | precorrin-2 dehydrogenase; Validated | 96.13 | |
| PRK14175 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.12 | |
| PRK07417 | 279 | arogenate dehydrogenase; Reviewed | 96.11 | |
| cd05280 | 325 | MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone | 96.09 | |
| COG1179 | 263 | Dinucleotide-utilizing enzymes involved in molybdo | 96.08 | |
| cd08291 | 324 | ETR_like_1 2-enoyl thioester reductase (ETR) like | 96.07 | |
| PRK00141 | 473 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.07 | |
| PLN02306 | 386 | hydroxypyruvate reductase | 96.06 | |
| cd08277 | 365 | liver_alcohol_DH_like Liver alcohol dehydrogenase. | 96.06 | |
| TIGR03451 | 358 | mycoS_dep_FDH mycothiol-dependent formaldehyde deh | 96.04 | |
| PRK00048 | 257 | dihydrodipicolinate reductase; Provisional | 96.04 | |
| TIGR03840 | 213 | TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d | 96.03 | |
| PF02882 | 160 | THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl | 96.02 | |
| PF12242 | 78 | Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2 | 96.02 | |
| PLN02514 | 357 | cinnamyl-alcohol dehydrogenase | 96.01 |
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.3e-24 Score=175.22 Aligned_cols=129 Identities=18% Similarity=0.189 Sum_probs=110.1
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCCc
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVT 153 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~d 153 (214)
..+|+++|||||+|||.++|++|++.|++|++.+|+.+++++++.++....+..+..|++|.++++.++ ++++|
T Consensus 4 ~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iD 83 (246)
T COG4221 4 LKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRID 83 (246)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCccc
Confidence 456999999999999999999999999999999999999999998886567889999999999977643 67899
Q ss_pred EEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 154 HVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 154 ~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
+||||||.+...+ .+.++++.++++|+.|..+.++++ +++.++||++||+++..+
T Consensus 84 iLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~ 146 (246)
T COG4221 84 ILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYP 146 (246)
T ss_pred EEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEecccccccc
Confidence 9999999986422 334566788999999999999877 345679999999997653
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.2e-24 Score=174.43 Aligned_cols=132 Identities=17% Similarity=0.216 Sum_probs=111.7
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC---CCCEEEEEecCCChhccchhh------
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
..+++++++|||||+|||+++|++|+++|++|++++|+.+++++++++++ +..++++.+|++|++++++..
T Consensus 2 ~~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~ 81 (265)
T COG0300 2 GPMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKER 81 (265)
T ss_pred CCCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhc
Confidence 34578999999999999999999999999999999999999999887776 345788999999999988632
Q ss_pred hCCCcEEEeccCCCCCC---CCCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEccccccccC
Q 028043 149 FEGVTHVICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~---~~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~~ 209 (214)
...+|+||||||..... ..+|++..+++++|+.+...+++++ +++.++||+|+|.+++.+.
T Consensus 82 ~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~ 150 (265)
T COG0300 82 GGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPT 150 (265)
T ss_pred CCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCC
Confidence 13699999999998753 3567777889999999999988876 3466899999999997654
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.89 E-value=2e-23 Score=173.43 Aligned_cols=133 Identities=19% Similarity=0.207 Sum_probs=105.9
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcc----cCCCCEEEEEecCCChhccchhh-----
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGK----QDEETLQVCKGDTRNPKDLDPAI----- 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~v~~Di~d~~~v~~~~----- 148 (214)
..+.+|+|+|||||+|||.++|.+|+++|++++++.|...+++.+.++ ....++.++++|++|.+++++++
T Consensus 8 e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~ 87 (282)
T KOG1205|consen 8 ERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIR 87 (282)
T ss_pred HHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHH
Confidence 456899999999999999999999999999999988887777665333 22225899999999999998743
Q ss_pred -hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh----c-cCCCeEEEEccccccccCC
Q 028043 149 -FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKFNE 210 (214)
Q Consensus 149 -~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~----~-~~~~~iV~vSS~~~~~~~~ 210 (214)
++++|+||||||+..... ...++....+++|+.|+..+++++ + .+.++||.+||++++...+
T Consensus 88 ~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P 158 (282)
T KOG1205|consen 88 HFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLP 158 (282)
T ss_pred hcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCC
Confidence 789999999999987322 222334567899999999999976 2 2458999999999876443
|
|
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.2e-21 Score=170.90 Aligned_cols=149 Identities=23% Similarity=0.275 Sum_probs=123.5
Q ss_pred HHHhhhhhccCCCCCCCCCCCCCCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccC----CCCEE
Q 028043 58 VVHAVQEEVVQTPNSDSKVTPASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQD----EETLQ 132 (214)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~----~~~~~ 132 (214)
++|++.+++..... ......++||+|+||||+|.||+++|+++++.+. ++++++|++.++.....++. ..+..
T Consensus 228 ieDLLgR~pV~~d~--~~i~~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~ 305 (588)
T COG1086 228 IEDLLGRPPVALDT--ELIGAMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLR 305 (588)
T ss_pred HHHHhCCCCCCCCH--HHHHhHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceE
Confidence 68899888765441 1123457899999999999999999999999887 58889999988766544443 36788
Q ss_pred EEEecCCChhccchhhhCC--CcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHh-ccCCCeEEEEccccccccC
Q 028043 133 VCKGDTRNPKDLDPAIFEG--VTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-PSSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 133 ~v~~Di~d~~~v~~~~~~~--~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~-~~~~~~iV~vSS~~~~~~~ 209 (214)
++.+|++|.+.++.+ +.+ +|+|+|+|+..++|..+ .++.+.+.+|+.||.|+++++ +.+++++|.+||..+.+|.
T Consensus 306 ~~igdVrD~~~~~~~-~~~~kvd~VfHAAA~KHVPl~E-~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKAV~Pt 383 (588)
T COG1086 306 FYIGDVRDRDRVERA-MEGHKVDIVFHAAALKHVPLVE-YNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKAVNPT 383 (588)
T ss_pred EEecccccHHHHHHH-HhcCCCceEEEhhhhccCcchh-cCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCcccCCc
Confidence 899999999999985 565 99999999999988765 466778899999999999988 5699999999999998876
Q ss_pred C
Q 028043 210 E 210 (214)
Q Consensus 210 ~ 210 (214)
+
T Consensus 384 N 384 (588)
T COG1086 384 N 384 (588)
T ss_pred h
Confidence 5
|
|
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.1e-20 Score=159.29 Aligned_cols=126 Identities=29% Similarity=0.422 Sum_probs=104.2
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHH--HhcccC--CCCEEEEEecCCChhccchhhhCCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATT--LFGKQD--EETLQVCKGDTRNPKDLDPAIFEGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~--~~~~~~--~~~~~~v~~Di~d~~~v~~~~~~~~d~li 156 (214)
.+++|+||||+|+||++++++|+++||.|+++.|+++..+. ...+++ ..++..+.+|++|++++.++ +.++|+|+
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~a-i~gcdgVf 83 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKA-IDGCDGVF 83 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHH-HhCCCEEE
Confidence 57899999999999999999999999999999999887433 223333 34588999999999999985 78899999
Q ss_pred eccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc--CCCeEEEEccccccccC
Q 028043 157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS--SLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 157 ~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~--~~~~iV~vSS~~~~~~~ 209 (214)
|.|....+...+ ...+..+..+.|+.+++++|+. .++|||++||.++..++
T Consensus 84 H~Asp~~~~~~~--~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~ 136 (327)
T KOG1502|consen 84 HTASPVDFDLED--PEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYN 136 (327)
T ss_pred EeCccCCCCCCC--cHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccC
Confidence 999987643322 2336789999999999999954 48999999999988654
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.2e-20 Score=156.20 Aligned_cols=131 Identities=15% Similarity=0.112 Sum_probs=108.3
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCC-CCEEEEEecCCChhccchhh------hC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDE-ETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
.+..|++||||||++|+|+++|.+|+++|+++++.|.+.+..++..++... ..+....||++|.+++.+.. .|
T Consensus 34 k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G 113 (300)
T KOG1201|consen 34 KSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVG 113 (300)
T ss_pred hhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence 567899999999999999999999999999999999998887776665542 36889999999999988633 67
Q ss_pred CCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccccc
Q 028043 151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~ 208 (214)
.+|+||||||+..... ...+..++.+++|+.|+++.++++. ...++||.++|+++.-.
T Consensus 114 ~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g 179 (300)
T KOG1201|consen 114 DVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFG 179 (300)
T ss_pred CceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccC
Confidence 8999999999986322 2334457888999999999999873 35689999999988643
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.3e-20 Score=154.22 Aligned_cols=131 Identities=20% Similarity=0.158 Sum_probs=103.3
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC---CCCEEEEEecCCChhccchhh-----h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAI-----F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~v~~Di~d~~~v~~~~-----~ 149 (214)
..+++|+++||||+||||++++++|+++|++|++++|+.++++++.+++. +.++.++.+|++|++++++.+ +
T Consensus 4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~ 83 (263)
T PRK08339 4 IDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNI 83 (263)
T ss_pred cCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhh
Confidence 34678999999999999999999999999999999999888776654432 346788999999999888643 3
Q ss_pred CCCcEEEeccCCCCCC---CCCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 150 EGVTHVICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~---~~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
+++|++|||||..... ....++++..+++|+.+++.+++++ +++.++||++||.++..+
T Consensus 84 g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~ 150 (263)
T PRK08339 84 GEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEP 150 (263)
T ss_pred CCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCC
Confidence 5799999999975421 1233445667899999998888765 234579999999987643
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.5e-20 Score=157.26 Aligned_cols=130 Identities=19% Similarity=0.183 Sum_probs=103.6
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhccc----CCCCEEEEEecCCChhccchhh-----
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ----DEETLQVCKGDTRNPKDLDPAI----- 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~v~~Di~d~~~v~~~~----- 148 (214)
.++++|+++||||++|||++++++|+++|++|++++|+.++.++..+++ .+.++.++.+|++|.+++++++
T Consensus 10 ~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~ 89 (313)
T PRK05854 10 PDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRA 89 (313)
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 4567899999999999999999999999999999999988776654433 2346788999999999988643
Q ss_pred -hCCCcEEEeccCCCCCCC--CCCCCCCchhHHHHHHHHHHHHHh----ccCCCeEEEEccccccc
Q 028043 149 -FEGVTHVICCTGTTAFPS--RRWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTK 207 (214)
Q Consensus 149 -~~~~d~li~~Ag~~~~~~--~~~~~~~~~~~vNv~g~~~l~~a~----~~~~~~iV~vSS~~~~~ 207 (214)
++++|+||||||....+. ...+..+..+++|+.|++.+++.+ +.+.++||++||.+...
T Consensus 90 ~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~ 155 (313)
T PRK05854 90 EGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARR 155 (313)
T ss_pred hCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcC
Confidence 357999999999875322 233455677899999999888866 23457999999987643
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=8.2e-20 Score=154.82 Aligned_cols=130 Identities=21% Similarity=0.237 Sum_probs=100.4
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhccc----CCCCEEEEEecCCChhccchhh-----
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ----DEETLQVCKGDTRNPKDLDPAI----- 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~v~~Di~d~~~v~~~~----- 148 (214)
+++++|+|+||||+||||++++++|+++|++|++++|+.++.++..+.+ .+..+.++.+|++|.+++++++
T Consensus 12 ~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 91 (306)
T PRK06197 12 PDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRA 91 (306)
T ss_pred ccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence 5668899999999999999999999999999999999987765543322 2346788999999999887643
Q ss_pred -hCCCcEEEeccCCCCCCC-CCCCCCCchhHHHHHHHHHHHHHh----c-cCCCeEEEEccccccc
Q 028043 149 -FEGVTHVICCTGTTAFPS-RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 149 -~~~~d~li~~Ag~~~~~~-~~~~~~~~~~~vNv~g~~~l~~a~----~-~~~~~iV~vSS~~~~~ 207 (214)
++++|+||||||....+. ...+..+..+++|+.|++.+++.+ + .+.++||++||.+++.
T Consensus 92 ~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~ 157 (306)
T PRK06197 92 AYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRI 157 (306)
T ss_pred hCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhc
Confidence 357999999999865332 223445667899999977766654 3 2457999999987543
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=9.3e-20 Score=151.77 Aligned_cols=128 Identities=15% Similarity=0.098 Sum_probs=100.8
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
.+++|+++||||+||||++++++|+++|++|++++|++++++++.+.+. .+.++.+|++|++++++++ ++++
T Consensus 2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (273)
T PRK07825 2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG--LVVGGPLDVTDPASFAAFLDAVEADLGPI 79 (273)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc--cceEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 3567899999999999999999999999999999999988876654432 4778999999999876533 4689
Q ss_pred cEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 153 d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
|++|||||...... ...+...+.+++|+.|+.++++++ +.+.++||++||.++..+
T Consensus 80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 143 (273)
T PRK07825 80 DVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIP 143 (273)
T ss_pred CEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCC
Confidence 99999999865321 122233556789999999988866 245679999999887643
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=8.9e-20 Score=152.68 Aligned_cols=130 Identities=15% Similarity=0.087 Sum_probs=102.1
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
.+++|+++||||+||||++++++|+++|++|++++|+++.+++..+++. +.++.++.+|++|++++++++ ++
T Consensus 3 ~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 82 (275)
T PRK05876 3 GFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLG 82 (275)
T ss_pred CcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 3578999999999999999999999999999999999887776654443 335778999999999887633 45
Q ss_pred CCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cC-CCeEEEEcccccccc
Q 028043 151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SS-LKRIVLVSSVGVTKF 208 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~-~~~iV~vSS~~~~~~ 208 (214)
++|+||||||...... ...+.....+++|+.|+.++++++. .+ .++||++||.+++.+
T Consensus 83 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~ 149 (275)
T PRK05876 83 HVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVP 149 (275)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccC
Confidence 7999999999864221 1222335567999999999998762 23 478999999987654
|
|
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.2e-19 Score=154.21 Aligned_cols=128 Identities=23% Similarity=0.200 Sum_probs=106.2
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC----CCCEEEEEecCCChhccchhh-----
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAI----- 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~v~~Di~d~~~v~~~~----- 148 (214)
.+..+++++||||++|||.++|++|+.+|++|++.+|+.++.++..+.+. ...+.++++|++|.++++++.
T Consensus 31 ~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~ 110 (314)
T KOG1208|consen 31 IDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKK 110 (314)
T ss_pred ccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence 55678999999999999999999999999999999999987777655443 456788999999999999744
Q ss_pred -hCCCcEEEeccCCCCCCCC-CCCCCCchhHHHHHHHHHHHHHh----cc-CCCeEEEEccccc
Q 028043 149 -FEGVTHVICCTGTTAFPSR-RWDGDNTPEKVDWEGVRNLVSAL----PS-SLKRIVLVSSVGV 205 (214)
Q Consensus 149 -~~~~d~li~~Ag~~~~~~~-~~~~~~~~~~vNv~g~~~l~~a~----~~-~~~~iV~vSS~~~ 205 (214)
..++|++|||||++..+.. ..+..+..+.+|+.|++.+++.+ +. ...|||++||...
T Consensus 111 ~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~ 174 (314)
T KOG1208|consen 111 KEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG 174 (314)
T ss_pred cCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc
Confidence 4589999999999986552 33456788899999999999876 22 2279999999875
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.1e-19 Score=149.64 Aligned_cols=129 Identities=14% Similarity=0.148 Sum_probs=101.3
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
+.+++|+++||||+||||++++++|+++|++|++++|++++++++.+++. +.++.++.+|++|++++++++ +
T Consensus 2 ~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (254)
T PRK07478 2 MRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERF 81 (254)
T ss_pred CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 34578999999999999999999999999999999999888777654443 345788999999999887643 3
Q ss_pred CCCcEEEeccCCCCC--C--CCCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccc
Q 028043 150 EGVTHVICCTGTTAF--P--SRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVT 206 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~--~--~~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~ 206 (214)
+++|+||||||.... + ....++....+++|+.++.++++++ +.+.++||++||.+++
T Consensus 82 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~ 147 (254)
T PRK07478 82 GGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGH 147 (254)
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhh
Confidence 589999999997532 1 1222344667899999999887765 2345789999998775
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.6e-19 Score=152.64 Aligned_cols=131 Identities=21% Similarity=0.229 Sum_probs=103.6
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC-CCCEEEEEecCCChhccchhh------hC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
.++++|+++||||+||||++++++|+++|++|++++|++++++++.+.+. ...+..+.+|++|.+++++++ ++
T Consensus 5 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 84 (296)
T PRK05872 5 TSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFG 84 (296)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 34678999999999999999999999999999999999988877665553 334566779999999887643 46
Q ss_pred CCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc----cCCCeEEEEcccccccc
Q 028043 151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~----~~~~~iV~vSS~~~~~~ 208 (214)
++|+||||||...... ..+++.++.+++|+.|+.++++++. +..++||++||.+++.+
T Consensus 85 ~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~ 149 (296)
T PRK05872 85 GIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAA 149 (296)
T ss_pred CCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCC
Confidence 8999999999864211 2223345678899999999998762 23478999999987654
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=2e-19 Score=151.87 Aligned_cols=131 Identities=17% Similarity=0.249 Sum_probs=102.5
Q ss_pred CCCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------
Q 028043 77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 77 ~~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
.+.+++|+++||||+||||++++++|+++|++|++++|+.+.++++.+++. +..+.++++|++|.+++++.+
T Consensus 35 ~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 114 (293)
T PRK05866 35 PVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKR 114 (293)
T ss_pred CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 356778999999999999999999999999999999999988776654432 345778999999999887643
Q ss_pred hCCCcEEEeccCCCCCCCC-----CCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEccccccc
Q 028043 149 FEGVTHVICCTGTTAFPSR-----RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTK 207 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~~~-----~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~ 207 (214)
++++|++|||||....... .+++....+++|+.|+.++++++ +.+.++||++||.+++.
T Consensus 115 ~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~ 183 (293)
T PRK05866 115 IGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLS 183 (293)
T ss_pred cCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcC
Confidence 3589999999998653211 12233456789999999988865 23568999999987653
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.6e-19 Score=149.24 Aligned_cols=130 Identities=18% Similarity=0.192 Sum_probs=102.4
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC----CCCEEEEEecCCChhccchhh------
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
.+++|+++||||+||||++++++|+++|++|++++|++++.++..+++. +.++.++++|++|++++++++
T Consensus 4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 83 (260)
T PRK07063 4 RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEA 83 (260)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 3568999999999999999999999999999999999888776655442 345778999999999887643
Q ss_pred hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccccc
Q 028043 149 FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||...... ...++....+++|+.++.++++++. .+.++||++||..+..+
T Consensus 84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 151 (260)
T PRK07063 84 FGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKI 151 (260)
T ss_pred hCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccC
Confidence 468999999999754211 1223445667899999999998762 34579999999877653
|
|
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.81 E-value=8e-20 Score=151.13 Aligned_cols=123 Identities=19% Similarity=0.194 Sum_probs=101.2
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhh-CCCcEEEeccCC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-EGVTHVICCTGT 161 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~-~~~d~li~~Ag~ 161 (214)
|+||||||+|+||++.+.+|++.|++|+++|.-...-.+.... ....++++|+.|.+.+++.+- .++|.|||.||.
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~---~~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~ 77 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLK---LQFKFYEGDLLDRALLTAVFEENKIDAVVHFAAS 77 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhh---ccCceEEeccccHHHHHHHHHhcCCCEEEECccc
Confidence 5799999999999999999999999999999855433222211 115789999999999987432 279999999999
Q ss_pred CCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccccccccC
Q 028043 162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 162 ~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~~ 209 (214)
..++ +..+++.++++.|+.||..|+++|+ .++++|||-||.++||..
T Consensus 78 ~~Vg-ESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p 125 (329)
T COG1087 78 ISVG-ESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEP 125 (329)
T ss_pred cccc-hhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCC
Confidence 8754 4456788899999999999999995 589999999999999854
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.3e-19 Score=153.56 Aligned_cols=126 Identities=23% Similarity=0.325 Sum_probs=100.5
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCC--CeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
+++|+|+||||+|+||++++++|+++| ++|++++|+......+.......++.++.+|++|.+.+.+ +++++|+|||
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~-~~~~iD~Vih 80 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTR-ALRGVDYVVH 80 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHH-HHhcCCEEEE
Confidence 367899999999999999999999986 7899999987655444333333468899999999999987 4678999999
Q ss_pred ccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccccccc
Q 028043 158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 158 ~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~ 207 (214)
+||....+.. ..++.+.+++|+.|+.+++++++ .+.++||++||.....
T Consensus 81 ~Ag~~~~~~~-~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~~~ 130 (324)
T TIGR03589 81 AAALKQVPAA-EYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKAAN 130 (324)
T ss_pred CcccCCCchh-hcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCCC
Confidence 9997653322 22345678999999999999985 4678999999976543
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.2e-19 Score=148.11 Aligned_cols=130 Identities=17% Similarity=0.194 Sum_probs=102.0
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
..+++|+++||||+||||++++++|+++|++|++++|+.++.+++.+.. +..+.++++|++|.+++++++ +++
T Consensus 6 ~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 84 (255)
T PRK05717 6 PGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL-GENAWFIAMDVADEAQVAAGVAEVLGQFGR 84 (255)
T ss_pred cccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc-CCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 5577899999999999999999999999999999999887766654433 345788999999999886532 457
Q ss_pred CcEEEeccCCCCCCC-----CCCCCCCchhHHHHHHHHHHHHHhc----cCCCeEEEEcccccccc
Q 028043 152 VTHVICCTGTTAFPS-----RRWDGDNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~-----~~~~~~~~~~~vNv~g~~~l~~a~~----~~~~~iV~vSS~~~~~~ 208 (214)
+|+||||||...... .+.+++...+++|+.|+.++++++. ...++||++||.+++.+
T Consensus 85 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~ 150 (255)
T PRK05717 85 LDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQS 150 (255)
T ss_pred CCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCC
Confidence 999999999864211 1223345678999999999999873 23478999999887653
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.6e-19 Score=155.03 Aligned_cols=130 Identities=15% Similarity=0.143 Sum_probs=103.0
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
.+.+|+++||||+||||++++++|+++|++|++++|++++++++.+++. +..+.++.+|++|++++++++ ++
T Consensus 4 ~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 83 (330)
T PRK06139 4 PLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGG 83 (330)
T ss_pred CCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence 4567999999999999999999999999999999999988877655443 345778899999999988743 36
Q ss_pred CCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
++|++|||||...... ...++..+.+++|+.|+.++++++ +.+.++||++||.+++.+
T Consensus 84 ~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~ 149 (330)
T PRK06139 84 RIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAA 149 (330)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCC
Confidence 8999999999865322 122233556899999999988865 234579999999887643
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.5e-19 Score=151.41 Aligned_cols=129 Identities=15% Similarity=0.077 Sum_probs=99.6
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
+++|++|||||+||||++++++|+++|++|++++|+.+.+++..+++. +.++.++.+|++|.+++++++ +++
T Consensus 4 ~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~ 83 (287)
T PRK06194 4 FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGA 83 (287)
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 467899999999999999999999999999999999877666544432 345778999999999887643 347
Q ss_pred CcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh----c-cCC------CeEEEEcccccccc
Q 028043 152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSL------KRIVLVSSVGVTKF 208 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~----~-~~~------~~iV~vSS~~~~~~ 208 (214)
+|+||||||...... ...++....+++|+.|+.++++++ . ... ++||++||.+++.+
T Consensus 84 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~ 154 (287)
T PRK06194 84 VHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLA 154 (287)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccC
Confidence 999999999865321 122334556789999999988764 2 222 68999999987654
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.8e-19 Score=149.44 Aligned_cols=130 Identities=18% Similarity=0.191 Sum_probs=101.7
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC-CCCEEEEEecCCChhccchhh------hC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
..+++|+++||||+||||++++++|+++|++|++++|+++..+++.+.+. ..++.++++|++|++++++++ ++
T Consensus 14 ~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g 93 (280)
T PLN02253 14 QRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFG 93 (280)
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhC
Confidence 34578999999999999999999999999999999998877666554443 246888999999999987643 35
Q ss_pred CCcEEEeccCCCCCC-----CCCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEccccccc
Q 028043 151 GVTHVICCTGTTAFP-----SRRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~-----~~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~ 207 (214)
++|+||||||..... ..++++.+..+++|+.|+.++++++. ...++||++||.++..
T Consensus 94 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~ 160 (280)
T PLN02253 94 TLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAI 160 (280)
T ss_pred CCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcc
Confidence 799999999975421 12233456778999999999988762 2446899999987643
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.3e-19 Score=156.49 Aligned_cols=128 Identities=16% Similarity=0.137 Sum_probs=99.8
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhH----HHHHhccc---CCCCEEEEEecCCChhccchhhhCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK----ATTLFGKQ---DEETLQVCKGDTRNPKDLDPAIFEG 151 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~----~~~~~~~~---~~~~~~~v~~Di~d~~~v~~~~~~~ 151 (214)
.+++|+|+||||+|+||++++++|+++|++|++++|.... ........ ...++.++.+|++|.+.+.+ ++.+
T Consensus 12 ~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~-~~~~ 90 (348)
T PRK15181 12 VLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQK-ACKN 90 (348)
T ss_pred cccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHH-HhhC
Confidence 3567899999999999999999999999999999986432 11111111 11357889999999988886 4678
Q ss_pred CcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEcccccccc
Q 028043 152 VTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~ 208 (214)
+|+|||+|+....+ ....++...+++|+.|+.+++++++ .+.+++|++||.++|+.
T Consensus 91 ~d~ViHlAa~~~~~-~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~ 147 (348)
T PRK15181 91 VDYVLHQAALGSVP-RSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGD 147 (348)
T ss_pred CCEEEECccccCch-hhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCC
Confidence 99999999976532 2233455678999999999999985 47889999999999874
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.6e-19 Score=153.95 Aligned_cols=131 Identities=18% Similarity=0.173 Sum_probs=103.0
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
..+++|+++||||+||||++++++|+++|++|++++|++++++++.+++. +.++.++.+|++|++++++++ +
T Consensus 4 ~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~ 83 (334)
T PRK07109 4 KPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEEL 83 (334)
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHC
Confidence 34567999999999999999999999999999999999988776654432 346788999999999988643 4
Q ss_pred CCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh----c-cCCCeEEEEcccccccc
Q 028043 150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~----~-~~~~~iV~vSS~~~~~~ 208 (214)
+++|++|||||...... ...++.+..+++|+.|+.++++++ + .+.++||++||.+++.+
T Consensus 84 g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~ 150 (334)
T PRK07109 84 GPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRS 150 (334)
T ss_pred CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccC
Confidence 68999999999764321 222344567799999988877655 2 34579999999988754
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.1e-19 Score=149.21 Aligned_cols=127 Identities=16% Similarity=0.127 Sum_probs=99.6
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCCcE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVTH 154 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~d~ 154 (214)
++|+++||||+||||++++++|+++|++|++++|++++.+.+.+.. ..++..+.+|++|++++.+.+ ++++|+
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~ 81 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALH-PDRALARLLDVTDFDAIDAVVADAEATFGPIDV 81 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhc-CCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4689999999999999999999999999999999998876654432 345788999999999887633 357999
Q ss_pred EEeccCCCCCCCC---CCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 155 VICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 155 li~~Ag~~~~~~~---~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
||||||....... ..+...+.+++|+.|+.++++++ +.+.++||++||.++..+
T Consensus 82 vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~ 143 (277)
T PRK06180 82 LVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLIT 143 (277)
T ss_pred EEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCC
Confidence 9999998653221 11223456799999999999975 234579999999877643
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.5e-19 Score=152.59 Aligned_cols=126 Identities=24% Similarity=0.251 Sum_probs=99.2
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
.+++|+|+||||+||||++++++|+++|++|++++|++++.++..+.+. ++.++++|++|.+++++++ ++++
T Consensus 23 ~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~--~v~~~~~Dl~d~~~v~~~~~~~~~~~~~i 100 (315)
T PRK06196 23 DLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID--GVEVVMLDLADLESVRAFAERFLDSGRRI 100 (315)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh--hCeEEEccCCCHHHHHHHHHHHHhcCCCC
Confidence 3568999999999999999999999999999999999888776554432 3778999999999987643 3579
Q ss_pred cEEEeccCCCCCCC-CCCCCCCchhHHHHHHHHHHHHHh----c-cCCCeEEEEcccccc
Q 028043 153 THVICCTGTTAFPS-RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVT 206 (214)
Q Consensus 153 d~li~~Ag~~~~~~-~~~~~~~~~~~vNv~g~~~l~~a~----~-~~~~~iV~vSS~~~~ 206 (214)
|+||||||....+. ...+..+..+++|+.|+..+++++ + .+.++||++||.+..
T Consensus 101 D~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~ 160 (315)
T PRK06196 101 DILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHR 160 (315)
T ss_pred CEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhc
Confidence 99999999865322 222344667899999988888755 2 344799999998653
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.1e-19 Score=148.00 Aligned_cols=127 Identities=16% Similarity=0.156 Sum_probs=101.3
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCCc
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVT 153 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~d 153 (214)
+++|+++||||+||||++++++|+++|++|++++|++++++++.+++ +.++.++++|++|++++++.+ ++++|
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id 82 (261)
T PRK08265 4 LAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL-GERARFIATDITDDAAIERAVATVVARFGRVD 82 (261)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCeeEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence 56799999999999999999999999999999999988777665544 346788999999999887633 46899
Q ss_pred EEEeccCCCCCCC--CCCCCCCchhHHHHHHHHHHHHHhc----cCCCeEEEEccccccc
Q 028043 154 HVICCTGTTAFPS--RRWDGDNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 154 ~li~~Ag~~~~~~--~~~~~~~~~~~vNv~g~~~l~~a~~----~~~~~iV~vSS~~~~~ 207 (214)
+||||||...... ..+++..+.+++|+.++.++++++. +..++||++||.++..
T Consensus 83 ~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~ 142 (261)
T PRK08265 83 ILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKF 142 (261)
T ss_pred EEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhcc
Confidence 9999999754211 2233445677899999999998763 3347899999987654
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.9e-19 Score=151.55 Aligned_cols=124 Identities=24% Similarity=0.302 Sum_probs=96.4
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhccc----CCCCEEEEEecCCChhccchhhhCCCcEE
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ----DEETLQVCKGDTRNPKDLDPAIFEGVTHV 155 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~v~~Di~d~~~v~~~~~~~~d~l 155 (214)
..+|+|+||||+|+||++++++|+++|++|+++.|+.+..+...... ...+++++.+|++|.+.+++ ++.++|+|
T Consensus 3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~-~~~~~d~v 81 (322)
T PLN02986 3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQ-AIEGCDAV 81 (322)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHH-HHhCCCEE
Confidence 35789999999999999999999999999999999875433221111 12468889999999998886 46789999
Q ss_pred EeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc--CCCeEEEEcccccc
Q 028043 156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS--SLKRIVLVSSVGVT 206 (214)
Q Consensus 156 i~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~--~~~~iV~vSS~~~~ 206 (214)
||+||..... ..+...+.+++|+.|+.++++++++ ++++||++||.+++
T Consensus 82 ih~A~~~~~~--~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~ 132 (322)
T PLN02986 82 FHTASPVFFT--VKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAV 132 (322)
T ss_pred EEeCCCcCCC--CCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhhe
Confidence 9999975321 1122234678999999999999853 57899999998865
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.5e-19 Score=152.04 Aligned_cols=127 Identities=17% Similarity=0.192 Sum_probs=99.6
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
..+|+++||||+||||++++++|+++|++|++++|+.++.+++.+++. ...+.++.+|++|.+++++++ .++
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~ 83 (322)
T PRK07453 4 DAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKP 83 (322)
T ss_pred CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence 467999999999999999999999999999999999888776655442 346788999999999988643 236
Q ss_pred CcEEEeccCCCCCC----CCCCCCCCchhHHHHHHHHHHHHHhc----c-C--CCeEEEEcccccc
Q 028043 152 VTHVICCTGTTAFP----SRRWDGDNTPEKVDWEGVRNLVSALP----S-S--LKRIVLVSSVGVT 206 (214)
Q Consensus 152 ~d~li~~Ag~~~~~----~~~~~~~~~~~~vNv~g~~~l~~a~~----~-~--~~~iV~vSS~~~~ 206 (214)
+|+||||||+.... ....+..+..+++|+.|++++++++. + + .++||++||.+.+
T Consensus 84 iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~ 149 (322)
T PRK07453 84 LDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTAN 149 (322)
T ss_pred ccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccC
Confidence 99999999975421 12223446678999999999988762 1 2 2599999998654
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.9e-19 Score=147.58 Aligned_cols=134 Identities=18% Similarity=0.178 Sum_probs=99.0
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
.+++|+++||||+||||++++++|+++|++|++++|++. .+++.+++. +.++.++.+|++|.+++++.+ ++
T Consensus 5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (260)
T PRK12823 5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFG 83 (260)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 356899999999999999999999999999999999853 223322221 345778999999998877633 45
Q ss_pred CCcEEEeccCCCCC--CC--CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEccccccccCCCCC
Q 028043 151 GVTHVICCTGTTAF--PS--RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFNELPW 213 (214)
Q Consensus 151 ~~d~li~~Ag~~~~--~~--~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~~~~p~ 213 (214)
++|+||||||.... +. ...++..+.+++|+.++.++++++ +.+.++||++||.++++....+|
T Consensus 84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~Y 155 (260)
T PRK12823 84 RIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGINRVPY 155 (260)
T ss_pred CCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCCCCCcc
Confidence 79999999996421 11 222334566789999998877755 23557999999998876554555
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.1e-19 Score=147.46 Aligned_cols=127 Identities=16% Similarity=0.175 Sum_probs=99.5
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCC-CEEEEEecCCChhccchhh------hCCCcE
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEE-TLQVCKGDTRNPKDLDPAI------FEGVTH 154 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~v~~Di~d~~~v~~~~------~~~~d~ 154 (214)
+|+++||||+||||++++++|+++|++|++++|+.+++++..+++... ++.++.+|++|++++++++ ++.+|+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~ 81 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV 81 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 479999999999999999999999999999999998877765544322 6888999999999887643 346899
Q ss_pred EEeccCCCCCCC----CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 155 VICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 155 li~~Ag~~~~~~----~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
+|||||...... .++++....+++|+.|+.++++++ +.+.++||++||.+++.+
T Consensus 82 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~ 144 (257)
T PRK07024 82 VIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRG 144 (257)
T ss_pred EEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCC
Confidence 999999864211 122334567799999999988754 235579999999877643
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.7e-19 Score=146.66 Aligned_cols=130 Identities=17% Similarity=0.136 Sum_probs=101.7
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
+++.+|+++||||+|+||++++++|+++|++|++++|++++.+++.+.+. +.++.++.+|++|++++++++ +
T Consensus 6 ~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 85 (255)
T PRK07523 6 FDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEI 85 (255)
T ss_pred cCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence 45678999999999999999999999999999999999887766544443 235778999999999888643 3
Q ss_pred CCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEccccccc
Q 028043 150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~ 207 (214)
+++|+||||||...... ...+..++.+++|+.++.++++++. .+.++||++||..+..
T Consensus 86 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~ 151 (255)
T PRK07523 86 GPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSAL 151 (255)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhcc
Confidence 57999999999864221 1222335567899999999999773 2467999999987644
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.6e-19 Score=148.79 Aligned_cols=122 Identities=18% Similarity=0.194 Sum_probs=97.6
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCCcE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVTH 154 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~d~ 154 (214)
++|+++||||+||||++++++|+++|++|++++|++++.+. ..+++++++|++|++++++++ ++++|+
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~ 76 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP------IPGVELLELDVTDDASVQAAVDEVIARAGRIDV 76 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc------cCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCE
Confidence 46799999999999999999999999999999998766543 235788999999999988743 457999
Q ss_pred EEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 155 VICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 155 li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
||||||...... ..+++....+++|+.|+.++++++ +.+.++||++||.+++.+
T Consensus 77 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~ 138 (270)
T PRK06179 77 LVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLP 138 (270)
T ss_pred EEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCC
Confidence 999999865322 222334667899999999999875 246789999999877543
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.4e-19 Score=148.46 Aligned_cols=123 Identities=19% Similarity=0.222 Sum_probs=97.3
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCCcE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVTH 154 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~d~ 154 (214)
++|+++||||+||||++++++|+++|++|++++|++++++++.. .+++++.+|++|++++++.+ ++++|+
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~----~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~ 77 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLAS----LGVHPLSLDVTDEASIKAAVDTIIAEEGRIDV 77 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 46899999999999999999999999999999999988766542 35788999999999987643 358999
Q ss_pred EEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh----c-cCCCeEEEEccccccc
Q 028043 155 VICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 155 li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~----~-~~~~~iV~vSS~~~~~ 207 (214)
||||||...... ..+++.+..+++|+.|+..+++++ + .+.++||++||.++..
T Consensus 78 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~ 138 (273)
T PRK06182 78 LVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKI 138 (273)
T ss_pred EEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcC
Confidence 999999865321 223345667799999987777654 2 3567999999987643
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=8.9e-19 Score=157.94 Aligned_cols=125 Identities=27% Similarity=0.494 Sum_probs=101.8
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC-----------CCCEEEEEecCCChhccch
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-----------EETLQVCKGDTRNPKDLDP 146 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-----------~~~~~~v~~Di~d~~~v~~ 146 (214)
....+|+|+||||+||||++++++|+++|++|++++|+.++++.+.+.+. ..+++++.+|++|.+++++
T Consensus 76 ~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~ 155 (576)
T PLN03209 76 DTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGP 155 (576)
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHH
Confidence 44578999999999999999999999999999999999988766543221 1357889999999999986
Q ss_pred hhhCCCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEcccccc
Q 028043 147 AIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVT 206 (214)
Q Consensus 147 ~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~ 206 (214)
.++++|+||||+|.... ...+....+++|+.|+.+++++++ .+.++||++||.++.
T Consensus 156 -aLggiDiVVn~AG~~~~---~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~ 212 (576)
T PLN03209 156 -ALGNASVVICCIGASEK---EVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTN 212 (576)
T ss_pred -HhcCCCEEEEccccccc---cccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhc
Confidence 47899999999997531 112334567899999999999985 478899999998764
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.9e-19 Score=140.29 Aligned_cols=128 Identities=14% Similarity=0.146 Sum_probs=102.4
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
.++|.+||||||++|||++++++|.+.|-+|++++|+++++++.+.+ .+.+....||+.|.++.++.+ +..+
T Consensus 2 k~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~--~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~l 79 (245)
T COG3967 2 KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAE--NPEIHTEVCDVADRDSRRELVEWLKKEYPNL 79 (245)
T ss_pred cccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhc--CcchheeeecccchhhHHHHHHHHHhhCCch
Confidence 45788999999999999999999999999999999999999988765 356778999999999877633 5589
Q ss_pred cEEEeccCCCCCCC-----CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 153 THVICCTGTTAFPS-----RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 153 d~li~~Ag~~~~~~-----~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
++||||||++...+ ...+...+...+|+.++.+++.++ ++....||+|||.-++-+
T Consensus 80 NvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvP 145 (245)
T COG3967 80 NVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVP 145 (245)
T ss_pred heeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCc
Confidence 99999999986322 111222445688999999988876 234568999999877654
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.5e-19 Score=146.91 Aligned_cols=130 Identities=13% Similarity=0.080 Sum_probs=98.3
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhH-HHHHhcccCCCCEEEEEecCCChhccchhh------hC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-ATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
+.+.+|+++||||++|||++++++|+++|++|++++|+... ..+..+.. +.++.++.+|++|++++++++ ++
T Consensus 4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 82 (251)
T PRK12481 4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEAL-GRKFHFITADLIQQKDIDSIVSQAVEVMG 82 (251)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHc-CCeEEEEEeCCCCHHHHHHHHHHHHHHcC
Confidence 34678999999999999999999999999999999886532 22212111 346788999999999988743 46
Q ss_pred CCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cC-CCeEEEEcccccccc
Q 028043 151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SS-LKRIVLVSSVGVTKF 208 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~-~~~iV~vSS~~~~~~ 208 (214)
++|++|||||...... ...+++++.+++|+.|+..+++++. ++ .++||++||.+++.+
T Consensus 83 ~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~ 149 (251)
T PRK12481 83 HIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQG 149 (251)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCC
Confidence 8999999999864221 2234456678999999999888662 22 469999999887653
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.3e-19 Score=147.07 Aligned_cols=130 Identities=22% Similarity=0.250 Sum_probs=100.6
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC----CCCEEEEEecCCChhccchhh------
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
++++|+++||||+||||++++++|+++|++|++++|+++++++..+++. +.++..+.+|++|.+++++++
T Consensus 5 ~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (265)
T PRK07062 5 QLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEAR 84 (265)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence 4678999999999999999999999999999999999887766543332 236778999999999887633
Q ss_pred hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh----c-cCCCeEEEEcccccccc
Q 028043 149 FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~----~-~~~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||...... ...++..+.+++|+.++..+++++ + .+.++||++||.++..+
T Consensus 85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 152 (265)
T PRK07062 85 FGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQP 152 (265)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCC
Confidence 468999999999754211 122234566789999998888765 2 24579999999887653
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.6e-19 Score=151.19 Aligned_cols=125 Identities=23% Similarity=0.298 Sum_probs=97.9
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhccc---C-CCCEEEEEecCCChhccchhhhCCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ---D-EETLQVCKGDTRNPKDLDPAIFEGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~v~~Di~d~~~v~~~~~~~~d~li 156 (214)
.+|+++||||+|+||++++++|+++|++|++++|+.+..+...... . ..+++++.+|++|.+++++ ++.++|+||
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~d~vi 82 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFEL-AIDGCETVF 82 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHH-HHcCCCEEE
Confidence 4689999999999999999999999999999988876443321111 1 2468889999999999886 467899999
Q ss_pred eccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc--CCCeEEEEccccccc
Q 028043 157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS--SLKRIVLVSSVGVTK 207 (214)
Q Consensus 157 ~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~--~~~~iV~vSS~~~~~ 207 (214)
||||.... ....+.....+++|+.|+.++++++.+ +.++||++||.++++
T Consensus 83 h~A~~~~~-~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~ 134 (325)
T PLN02989 83 HTASPVAI-TVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVL 134 (325)
T ss_pred EeCCCCCC-CCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhhee
Confidence 99997542 222234456779999999999998843 457999999988764
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.6e-19 Score=147.87 Aligned_cols=129 Identities=10% Similarity=0.099 Sum_probs=97.9
Q ss_pred CCCCCCEEEEEcCc--hHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGS--GGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGas--ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
+.+++|+++||||+ +|||++++++|+++|++|++++|+. +.++..+++....+.++++|++|++++++++ +
T Consensus 3 ~~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (252)
T PRK06079 3 GILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERV 81 (252)
T ss_pred cccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHh
Confidence 34678999999999 7999999999999999999999984 3333333333346778999999999988633 4
Q ss_pred CCCcEEEeccCCCCC-----C--CCCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEccccccc
Q 028043 150 EGVTHVICCTGTTAF-----P--SRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTK 207 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~-----~--~~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~ 207 (214)
+++|+||||||.... + ....++.+..+++|+.|+..+++++.+ ..++||++||.++..
T Consensus 82 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~ 149 (252)
T PRK06079 82 GKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSER 149 (252)
T ss_pred CCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccc
Confidence 689999999997642 1 122233456678999999999987732 236899999987654
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.80 E-value=5.4e-19 Score=150.28 Aligned_cols=121 Identities=23% Similarity=0.310 Sum_probs=94.9
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcc--cC--CCCEEEEEecCCChhccchhhhCCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGK--QD--EETLQVCKGDTRNPKDLDPAIFEGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~--~~--~~~~~~v~~Di~d~~~v~~~~~~~~d~li 156 (214)
++|+|+||||+|+||++++++|+++|++|++++|+.+........ .. ..+++++++|++|++.+++ ++.++|+||
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~-~~~~~d~Vi 81 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDS-VVDGCEGVF 81 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHH-HHcCCCEEE
Confidence 468999999999999999999999999999999986543221110 11 2467899999999998886 478899999
Q ss_pred eccCCCCCCCCCCCCC-CchhHHHHHHHHHHHHHhc-c-CCCeEEEEccccc
Q 028043 157 CCTGTTAFPSRRWDGD-NTPEKVDWEGVRNLVSALP-S-SLKRIVLVSSVGV 205 (214)
Q Consensus 157 ~~Ag~~~~~~~~~~~~-~~~~~vNv~g~~~l~~a~~-~-~~~~iV~vSS~~~ 205 (214)
|+||.... ...++ ...+++|+.|+.+++++++ . +.++||++||.++
T Consensus 82 h~A~~~~~---~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~ 130 (322)
T PLN02662 82 HTASPFYH---DVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAA 130 (322)
T ss_pred EeCCcccC---CCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHH
Confidence 99997531 11223 3577999999999999884 3 6789999999874
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.80 E-value=5e-19 Score=147.67 Aligned_cols=128 Identities=16% Similarity=0.116 Sum_probs=98.6
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
+++|+++||||++|||++++++|+++|++|++++|+ +++++..+++. +.++..+.+|++|++++++++ +++
T Consensus 4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 82 (272)
T PRK08589 4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGR 82 (272)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence 568999999999999999999999999999999999 55555444332 345788999999999887633 467
Q ss_pred CcEEEeccCCCCCCC----CCCCCCCchhHHHHHHHHHHHHHh----ccCCCeEEEEcccccccc
Q 028043 152 VTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~----~~~~~~~~~~~vNv~g~~~l~~a~----~~~~~~iV~vSS~~~~~~ 208 (214)
+|+||||||...... ...+...+.+++|+.|+..+++++ ++..++||++||.+++.+
T Consensus 83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 147 (272)
T PRK08589 83 VDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQAA 147 (272)
T ss_pred cCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcCC
Confidence 999999999864211 122233556789999999888876 223379999999887653
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.1e-19 Score=146.30 Aligned_cols=129 Identities=16% Similarity=0.155 Sum_probs=101.8
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
+.+|+++||||+||||++++++|+++|++|++++|+++..+++.+++. +.++.++.+|++|++++++++ +++
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGR 82 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence 467999999999999999999999999999999999887766655443 346788999999999887633 468
Q ss_pred CcEEEeccCCCCCC----CCCCCCCCchhHHHHHHHHHHHHHhc----cCCCeEEEEcccccccc
Q 028043 152 VTHVICCTGTTAFP----SRRWDGDNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 152 ~d~li~~Ag~~~~~----~~~~~~~~~~~~vNv~g~~~l~~a~~----~~~~~iV~vSS~~~~~~ 208 (214)
+|+||||||..... ..+.++....+++|+.|+..+++++. ...++||++||..+..+
T Consensus 83 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~ 147 (258)
T PRK07890 83 VDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHS 147 (258)
T ss_pred ccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccC
Confidence 99999999975321 12233446678999999999999873 23468999999887654
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=7.4e-19 Score=145.24 Aligned_cols=126 Identities=13% Similarity=0.097 Sum_probs=101.0
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh-------hCCCcE
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-------FEGVTH 154 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~-------~~~~d~ 154 (214)
+|+++||||+||||++++++|+++|++|++++|+++.++++.+...+.++.++++|++|.+++++.+ .+++|+
T Consensus 1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~ 80 (260)
T PRK08267 1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDV 80 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCE
Confidence 4789999999999999999999999999999999988877765554557889999999999887632 346899
Q ss_pred EEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEccccccc
Q 028043 155 VICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 155 li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~ 207 (214)
||||||...... ..+++.+..+++|+.|+.++++++. .+.++||++||.++..
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~ 141 (260)
T PRK08267 81 LFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIY 141 (260)
T ss_pred EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCc
Confidence 999999865321 2223346678999999999988762 3457999999986643
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.4e-19 Score=145.63 Aligned_cols=128 Identities=14% Similarity=0.183 Sum_probs=100.5
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
.+++|+++||||+||||++++++|+++|++|++++|+.++.+++.+++. +.++..+.+|++|++++++++ ++
T Consensus 6 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 85 (253)
T PRK05867 6 DLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELG 85 (253)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 4578999999999999999999999999999999999888777655443 345778999999999887643 46
Q ss_pred CCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cC-CCeEEEEcccccc
Q 028043 151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SS-LKRIVLVSSVGVT 206 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~-~~~iV~vSS~~~~ 206 (214)
++|+||||||...... ...+...+.+++|+.++..+++++. ++ .++||++||.++.
T Consensus 86 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~ 150 (253)
T PRK05867 86 GIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGH 150 (253)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhc
Confidence 8999999999864321 1223345567899999999998762 22 3579999998764
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=7e-19 Score=147.32 Aligned_cols=127 Identities=10% Similarity=0.116 Sum_probs=95.9
Q ss_pred CCCCCEEEEEcCc--hHHHHHHHHHHHHCCCeEEEEEcChh---HHHHHhcccCCCCEEEEEecCCChhccchhh-----
Q 028043 79 ASSSKLVLVAGGS--GGVGQLVVASLLSRNIKSRLLLRDPE---KATTLFGKQDEETLQVCKGDTRNPKDLDPAI----- 148 (214)
Q Consensus 79 ~~~~k~vlITGas--ggIG~~la~~L~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~----- 148 (214)
.+++|+++||||+ +|||++++++|++.|++|++++|+.. .++++.+++. .. ..+++|++|.+++++++
T Consensus 2 ~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~-~~-~~~~~Dv~d~~~v~~~~~~i~~ 79 (274)
T PRK08415 2 IMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELG-SD-YVYELDVSKPEHFKSLAESLKK 79 (274)
T ss_pred ccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcC-Cc-eEEEecCCCHHHHHHHHHHHHH
Confidence 3568999999997 89999999999999999999999853 3344433332 23 57899999999988643
Q ss_pred -hCCCcEEEeccCCCCC-----C--CCCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEccccccc
Q 028043 149 -FEGVTHVICCTGTTAF-----P--SRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTK 207 (214)
Q Consensus 149 -~~~~d~li~~Ag~~~~-----~--~~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~ 207 (214)
++++|+||||||.... + ....++.++.+++|+.|++++++++.+ ..++||++||.++..
T Consensus 80 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~ 149 (274)
T PRK08415 80 DLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVK 149 (274)
T ss_pred HcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCcc
Confidence 5689999999997531 1 122233466789999999999987732 236899999987654
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=8.1e-19 Score=146.74 Aligned_cols=124 Identities=17% Similarity=0.156 Sum_probs=96.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------h-CCCc
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------F-EGVT 153 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~-~~~d 153 (214)
++|+++||||+||||++++++|+++|++|++++|+++.++++.+ .+++++.+|++|.+++++++ + +++|
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~----~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id 78 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA----EGLEAFQLDYAEPESIAALVAQVLELSGGRLD 78 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----CCceEEEccCCCHHHHHHHHHHHHHHcCCCcc
Confidence 46899999999999999999999999999999999988776643 35778999999998877633 1 4799
Q ss_pred EEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHH----hc-cCCCeEEEEcccccccc
Q 028043 154 HVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSA----LP-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 154 ~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a----~~-~~~~~iV~vSS~~~~~~ 208 (214)
+||||||...... ...+.....+++|+.|+.+++++ ++ .+.++||++||..++.+
T Consensus 79 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~ 141 (277)
T PRK05993 79 ALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVP 141 (277)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCC
Confidence 9999999865322 11123355679999996665554 33 45689999999877543
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.4e-18 Score=144.02 Aligned_cols=129 Identities=18% Similarity=0.220 Sum_probs=99.5
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
.+++|+++||||+||||++++++|+++|++|++++|+.+.++++.+.. +.++..+++|++|.+++++++ ++++
T Consensus 2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 80 (262)
T TIGR03325 2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAH-GDAVVGVEGDVRSLDDHKEAVARCVAAFGKI 80 (262)
T ss_pred CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhc-CCceEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 356899999999999999999999999999999999988777765432 345788999999998877633 4689
Q ss_pred cEEEeccCCCCC--CC--CCC----CCCCchhHHHHHHHHHHHHHhc----cCCCeEEEEcccccccc
Q 028043 153 THVICCTGTTAF--PS--RRW----DGDNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 153 d~li~~Ag~~~~--~~--~~~----~~~~~~~~vNv~g~~~l~~a~~----~~~~~iV~vSS~~~~~~ 208 (214)
|+||||||.... +. ... +..++.+++|+.|+.++++++. +..+++|++||..++.+
T Consensus 81 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~ 148 (262)
T TIGR03325 81 DCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYP 148 (262)
T ss_pred CEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecC
Confidence 999999997431 11 111 1245678999999999999772 23368999999877643
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.79 E-value=9.4e-20 Score=152.13 Aligned_cols=124 Identities=26% Similarity=0.329 Sum_probs=93.4
Q ss_pred EEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhccc----CCCCEE----EEEecCCChhccchhhhC--CCc
Q 028043 85 VLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQ----DEETLQ----VCKGDTRNPKDLDPAIFE--GVT 153 (214)
Q Consensus 85 vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~----~~~~~~----~v~~Di~d~~~v~~~~~~--~~d 153 (214)
||||||+|.||++++++|++.+. ++++++|++..+-++..++ ...++. .+.+|++|.+.+.+ ++. ++|
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~-~~~~~~pd 79 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNR-IFEEYKPD 79 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHH-HTT--T-S
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHH-HHhhcCCC
Confidence 79999999999999999999986 6999999999987776655 233343 35789999999997 466 899
Q ss_pred EEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHh-ccCCCeEEEEccccccccCC
Q 028043 154 HVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-PSSLKRIVLVSSVGVTKFNE 210 (214)
Q Consensus 154 ~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~-~~~~~~iV~vSS~~~~~~~~ 210 (214)
+|+|.|+..++|..+ .++.+..++|+.||.++++++ +.+++++|++||..+..|.+
T Consensus 80 iVfHaAA~KhVpl~E-~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKAv~Ptn 136 (293)
T PF02719_consen 80 IVFHAAALKHVPLME-DNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKAVNPTN 136 (293)
T ss_dssp EEEE------HHHHC-CCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGCSS--S
T ss_pred EEEEChhcCCCChHH-hCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccccCCCCc
Confidence 999999999977655 467778999999999999988 56899999999999977654
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.79 E-value=6.9e-19 Score=145.73 Aligned_cols=121 Identities=17% Similarity=0.184 Sum_probs=96.1
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
++++|+++||||+||||++++++|+++|++|++++|+.... .++.++++|++|++++++++ ++++
T Consensus 3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~---------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~i 73 (258)
T PRK06398 3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY---------NDVDYFKVDVSNKEQVIKGIDYVISKYGRI 73 (258)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc---------CceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 45789999999999999999999999999999999986432 24778999999999887643 4579
Q ss_pred cEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccccc
Q 028043 153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 153 d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~ 208 (214)
|+||||||...... ...++..+.+++|+.|+..+++++. .+.++||++||.+++.+
T Consensus 74 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~ 137 (258)
T PRK06398 74 DILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAV 137 (258)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccC
Confidence 99999999864221 1223345567999999999988762 34579999999987654
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=99.79 E-value=8.5e-19 Score=153.24 Aligned_cols=127 Identities=13% Similarity=0.069 Sum_probs=99.1
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHC-CCeEEEEEcChhHHHHHhccc---CCCCEEEEEecCCChhccchhhhCCCcEE
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQ---DEETLQVCKGDTRNPKDLDPAIFEGVTHV 155 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~---~~~~~~~v~~Di~d~~~v~~~~~~~~d~l 155 (214)
.+.|+|+||||+|+||++++++|+++ |++|++++|+.++.+.+.... ...+++++.+|++|.+.+++ ++.++|+|
T Consensus 12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~-~~~~~d~V 90 (386)
T PLN02427 12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEG-LIKMADLT 90 (386)
T ss_pred ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHH-HhhcCCEE
Confidence 45578999999999999999999998 599999999876655443211 12368899999999999887 46789999
Q ss_pred EeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEEcccccccc
Q 028043 156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 156 i~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~vSS~~~~~~ 208 (214)
||+|+..... ....++.+.+..|+.|+.++++++++..+++|++||..+|+.
T Consensus 91 iHlAa~~~~~-~~~~~~~~~~~~n~~gt~~ll~aa~~~~~r~v~~SS~~vYg~ 142 (386)
T PLN02427 91 INLAAICTPA-DYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGK 142 (386)
T ss_pred EEcccccChh-hhhhChHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeeeeeCC
Confidence 9999975421 112233445678999999999998654489999999998874
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=7.5e-19 Score=145.55 Aligned_cols=129 Identities=19% Similarity=0.213 Sum_probs=100.6
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
.+++|+++||||+||||++++++|+++|++|++++|++++++++.+.. ..++.++++|++|++++++++ ++++
T Consensus 3 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 81 (263)
T PRK06200 3 WLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF-GDHVLVVEGDVTSYADNQRAVDQTVDAFGKL 81 (263)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCcceEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 356899999999999999999999999999999999988877765544 345778999999999887633 4589
Q ss_pred cEEEeccCCCCC--C--CCCCCC----CCchhHHHHHHHHHHHHHhc----cCCCeEEEEcccccccc
Q 028043 153 THVICCTGTTAF--P--SRRWDG----DNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 153 d~li~~Ag~~~~--~--~~~~~~----~~~~~~vNv~g~~~l~~a~~----~~~~~iV~vSS~~~~~~ 208 (214)
|+||||||+... + ...+++ +++.+++|+.++..+++++. ...++||++||.+++.+
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~ 149 (263)
T PRK06200 82 DCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYP 149 (263)
T ss_pred CEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCC
Confidence 999999997531 1 111121 34567899999999988763 23468999999987654
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=9.5e-19 Score=143.28 Aligned_cols=130 Identities=18% Similarity=0.142 Sum_probs=101.8
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC-CCCEEEEEecCCChhccchhh------hCCC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
+.+|+++||||+|+||++++++|+++|++|++++|++++.+++...+. +.++.++++|++|++++++++ ++++
T Consensus 3 ~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 82 (251)
T PRK07231 3 LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSV 82 (251)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 567899999999999999999999999999999999887766544332 345788999999999998643 3579
Q ss_pred cEEEeccCCCCCCC----CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEccccccccC
Q 028043 153 THVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 153 d~li~~Ag~~~~~~----~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~~ 209 (214)
|+||||||...... ...+...+.+++|+.|+.++++.+. .+.++||++||..++.+.
T Consensus 83 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~ 148 (251)
T PRK07231 83 DILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPR 148 (251)
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCC
Confidence 99999999754211 1223345567899999988888662 356789999999886643
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.1e-18 Score=145.51 Aligned_cols=125 Identities=22% Similarity=0.247 Sum_probs=99.3
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCCcEE
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVTHV 155 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~d~l 155 (214)
.|+++||||+||||++++++|+++|++|++++|+++..+++.+.. ..++.++.+|++|.+++++.+ ++++|+|
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY-GDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVV 80 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 478999999999999999999999999999999998877665443 346888999999999887643 3579999
Q ss_pred EeccCCCCCCC-C--CCCCCCchhHHHHHHHHHHHHHh----c-cCCCeEEEEccccccc
Q 028043 156 ICCTGTTAFPS-R--RWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 156 i~~Ag~~~~~~-~--~~~~~~~~~~vNv~g~~~l~~a~----~-~~~~~iV~vSS~~~~~ 207 (214)
|||||...... . .+++....+++|+.|+.++++++ + .+.++||++||.++..
T Consensus 81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~ 140 (276)
T PRK06482 81 VSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQI 140 (276)
T ss_pred EECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCccccc
Confidence 99999875322 1 12233556789999999999986 2 3567999999987643
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1e-18 Score=145.81 Aligned_cols=127 Identities=19% Similarity=0.190 Sum_probs=101.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCCcE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVTH 154 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~d~ 154 (214)
++|+++||||+||||++++++|+++|++|++++|+++.++++.+.. ...+.++++|++|++++++.+ ++++|+
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 80 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY-GDRLLPLALDVTDRAAVFAAVETAVEHFGRLDI 80 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc-cCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4689999999999999999999999999999999988877665443 345778899999999887633 357999
Q ss_pred EEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 155 VICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 155 li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
+|||||...... ..+++..+.+++|+.++.++++++ +.+.++||++||.+++.+
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~ 142 (275)
T PRK08263 81 VVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISA 142 (275)
T ss_pred EEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCC
Confidence 999999865321 223345667899999999888875 235679999999887654
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.3e-18 Score=142.69 Aligned_cols=126 Identities=16% Similarity=0.226 Sum_probs=98.5
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC----CCCEEEEEecCCChhccchhh------hCC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
+|+++||||+||||++++++|+++|++|++++|++++.+++...+. +.+++++.+|++|++++++++ +++
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG 81 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5899999999999999999999999999999999887766543322 346788999999999887633 468
Q ss_pred CcEEEeccCCCCCCCC---CCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEccccccc
Q 028043 152 VTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTK 207 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~~---~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~ 207 (214)
+|++|||||+...... .++.....+++|+.|+.++++++ +.+.++||++||..+..
T Consensus 82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~ 145 (248)
T PRK08251 82 LDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVR 145 (248)
T ss_pred CCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEecccccc
Confidence 9999999998653221 12233456789999999988876 23567999999987654
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=9.1e-19 Score=143.58 Aligned_cols=130 Identities=18% Similarity=0.184 Sum_probs=100.0
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
.+++|+++||||+||||++++++|+++|++|++++|+++..+++.+.+. ..++.++.+|++|.+++++.. ++
T Consensus 3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (250)
T PRK07774 3 RFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFG 82 (250)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 3567999999999999999999999999999999999876655443332 235678899999999877632 35
Q ss_pred CCcEEEeccCCCCCC------CCCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccccc
Q 028043 151 GVTHVICCTGTTAFP------SRRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~------~~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~ 208 (214)
++|+||||||..... ...++...+.+++|+.++.++++++. .+.++||++||.+++.+
T Consensus 83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~ 151 (250)
T PRK07774 83 GIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWLY 151 (250)
T ss_pred CCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccCC
Confidence 799999999985421 12233345567899999999998773 24579999999887653
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.79 E-value=9.6e-19 Score=150.93 Aligned_cols=127 Identities=23% Similarity=0.236 Sum_probs=98.6
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC-CCCEEEEEecCCChhccchhhhC-CCcEEEec
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAIFE-GVTHVICC 158 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~v~~Di~d~~~v~~~~~~-~~d~li~~ 158 (214)
++|+|+||||+|+||++++++|+++|++|++++|+............ ..++.++.+|++|.+++.+.+-+ ++|+|||+
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~ 82 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHL 82 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEEC
Confidence 57899999999999999999999999999999998754333221111 23567789999999998874322 58999999
Q ss_pred cCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-C-CCeEEEEcccccccc
Q 028043 159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-LKRIVLVSSVGVTKF 208 (214)
Q Consensus 159 Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~-~~~iV~vSS~~~~~~ 208 (214)
||.... ....+++...+++|+.|+.+++++++. + .+++|++||..+|+.
T Consensus 83 A~~~~~-~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~ 133 (349)
T TIGR02622 83 AAQPLV-RKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRN 133 (349)
T ss_pred Cccccc-ccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCC
Confidence 996542 233345567789999999999998854 3 679999999988763
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=8.4e-19 Score=144.27 Aligned_cols=128 Identities=15% Similarity=0.143 Sum_probs=96.8
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhccc----CCCCEEEEEecCCChhccchhh------h
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ----DEETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
+++|+++||||+||||++++++|+++|++|++++|++++.+++.+.+ ....+.++++|++|++++++++ +
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 81 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY 81 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence 46799999999999999999999999999999999988776654433 1234667799999999887643 3
Q ss_pred CCCcEEEeccCCCCC------CCCCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEccccccc
Q 028043 150 EGVTHVICCTGTTAF------PSRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTK 207 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~------~~~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~ 207 (214)
+++|+||||||.... ...+++.....+++|+.++..+++++ +.+.++||++||.+++.
T Consensus 82 ~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~ 150 (256)
T PRK09186 82 GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVV 150 (256)
T ss_pred CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhc
Confidence 469999999975421 11222334556788999988887765 23567999999987653
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1e-18 Score=144.08 Aligned_cols=130 Identities=15% Similarity=0.133 Sum_probs=99.0
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChh-HHHHHhcccC--CCCEEEEEecCCChhccchhh------
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-KATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
.++++|+++||||+||||++++++|+++|++|++++|+.+ ..++..+.+. +.++..+++|++|++++++++
T Consensus 4 ~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~ 83 (254)
T PRK06114 4 FDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAE 83 (254)
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3467899999999999999999999999999999999754 3344333222 345778999999999887633
Q ss_pred hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEccccccc
Q 028043 149 FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTK 207 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~ 207 (214)
++++|+||||||...... ...++.++.+++|+.|+..+++++ +.+.++||++||.++..
T Consensus 84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~ 150 (254)
T PRK06114 84 LGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGII 150 (254)
T ss_pred cCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcC
Confidence 467999999999865321 223344667789999999888865 23457999999988754
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.8e-18 Score=149.25 Aligned_cols=124 Identities=27% Similarity=0.369 Sum_probs=96.6
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC----CCCEEEEEecCCChhccchhhhCCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAIFEGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~v~~Di~d~~~v~~~~~~~~d~li 156 (214)
..|+||||||+|+||++++++|+++|++|++++|+.+..+.+..... ..+++++.+|++|.+.+++ ++.++|+||
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~-~~~~~d~Vi 82 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDD-AIRGCTGVF 82 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHH-HHhCCCEEE
Confidence 35799999999999999999999999999999998765544322111 1257889999999998886 467899999
Q ss_pred eccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-C-CCeEEEEccccccc
Q 028043 157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-LKRIVLVSSVGVTK 207 (214)
Q Consensus 157 ~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~-~~~iV~vSS~~~~~ 207 (214)
|+|+..... ..+.....+++|+.|+.++++++.+ + .++||++||.++++
T Consensus 83 H~A~~~~~~--~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~ 133 (351)
T PLN02650 83 HVATPMDFE--SKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVN 133 (351)
T ss_pred EeCCCCCCC--CCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcc
Confidence 999865321 1122235679999999999999854 4 67999999987664
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.5e-19 Score=149.00 Aligned_cols=118 Identities=31% Similarity=0.392 Sum_probs=94.1
Q ss_pred EEEcCchHHHHHHHHHHHHCC--CeEEEEEcChhHHH-HHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccCCC
Q 028043 86 LVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKAT-TLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT 162 (214)
Q Consensus 86 lITGasggIG~~la~~L~~~G--~~V~~~~r~~~~~~-~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag~~ 162 (214)
|||||+|+||++|+++|+++| ++|.++++++.... ..... ....+++.+|++|++++.++ +.++|+|||+|+..
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~--~~~~~~~~~Di~d~~~l~~a-~~g~d~V~H~Aa~~ 77 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQK--SGVKEYIQGDITDPESLEEA-LEGVDVVFHTAAPV 77 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhc--ccceeEEEeccccHHHHHHH-hcCCceEEEeCccc
Confidence 699999999999999999999 78999998765422 11111 12234899999999999974 78999999999976
Q ss_pred CCCCCCCCCCCchhHHHHHHHHHHHHHh-ccCCCeEEEEcccccccc
Q 028043 163 AFPSRRWDGDNTPEKVDWEGVRNLVSAL-PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 163 ~~~~~~~~~~~~~~~vNv~g~~~l~~a~-~~~~~~iV~vSS~~~~~~ 208 (214)
.... ....+.++++|+.||.+++++| +.+++++||+||.++++.
T Consensus 78 ~~~~--~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~ 122 (280)
T PF01073_consen 78 PPWG--DYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFD 122 (280)
T ss_pred cccC--cccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEe
Confidence 5321 1234567899999999999999 458999999999998765
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.2e-18 Score=142.81 Aligned_cols=129 Identities=13% Similarity=0.117 Sum_probs=99.4
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC-CCCEEEEEecCCChhccchhh------hCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
++++|+++||||+|+||++++++|+++|++|++++|+.+..++..+.+. +.++.++++|++|++++++++ +++
T Consensus 2 ~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~ 81 (252)
T PRK06138 2 RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGR 81 (252)
T ss_pred CCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4578999999999999999999999999999999999877665444332 345788999999999988643 358
Q ss_pred CcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEccccccc
Q 028043 152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTK 207 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~ 207 (214)
+|+||||||...... ...+.....+++|+.++.++++++ +.+.++||++||..+..
T Consensus 82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~ 145 (252)
T PRK06138 82 LDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALA 145 (252)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhcc
Confidence 999999999864211 112223445789999998887765 23567999999986643
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.78 E-value=9.2e-19 Score=150.62 Aligned_cols=124 Identities=16% Similarity=0.262 Sum_probs=95.3
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChh-----HHHHHhccc---CCCCEEEEEecCCChhccchhhhC--CC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-----KATTLFGKQ---DEETLQVCKGDTRNPKDLDPAIFE--GV 152 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~-----~~~~~~~~~---~~~~~~~v~~Di~d~~~v~~~~~~--~~ 152 (214)
|+||||||+|+||++++++|+++|++|++++|+.+ ..+.+.+.. ...+++++.+|++|.+.+.++ +. ++
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~-~~~~~~ 79 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRI-IDEIKP 79 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHH-HHhCCC
Confidence 68999999999999999999999999999999753 222222111 124588999999999998874 44 58
Q ss_pred cEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CC---CeEEEEcccccccc
Q 028043 153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL---KRIVLVSSVGVTKF 208 (214)
Q Consensus 153 d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~---~~iV~vSS~~~~~~ 208 (214)
|+|||+|+..... ...+......++|+.|+.++++++++ +. .++|++||.++|+.
T Consensus 80 d~ViH~Aa~~~~~-~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~ 138 (343)
T TIGR01472 80 TEIYNLAAQSHVK-VSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGK 138 (343)
T ss_pred CEEEECCcccccc-hhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCC
Confidence 9999999986532 22233445668899999999999854 54 38999999999874
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.6e-18 Score=142.78 Aligned_cols=129 Identities=16% Similarity=0.129 Sum_probs=100.7
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
+.+.+|+++||||+||||++++++|+++|++|++++|++++++++.+++. +.++..+.+|++|++++++.+ +
T Consensus 5 ~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (254)
T PRK08085 5 FSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDI 84 (254)
T ss_pred ccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhc
Confidence 34678999999999999999999999999999999999887766554443 335678899999999888643 3
Q ss_pred CCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccc
Q 028043 150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVT 206 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~ 206 (214)
+++|+||||||...... ...+++++.+++|+.|+..+++++. .+.++||++||..+.
T Consensus 85 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~ 149 (254)
T PRK08085 85 GPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSE 149 (254)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhc
Confidence 57999999999754211 2223345678999999999988762 345799999998654
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.5e-18 Score=143.23 Aligned_cols=131 Identities=15% Similarity=0.142 Sum_probs=102.9
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC----CCCEEEEEecCCChhccchhh-----
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAI----- 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~v~~Di~d~~~v~~~~----- 148 (214)
..+.+|+++||||+||||++++++|+++|++|++++|+.+..+++.+++. +.++.++.+|++|++++++++
T Consensus 5 ~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 84 (257)
T PRK09242 5 WRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVED 84 (257)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 34578999999999999999999999999999999999887766554432 346788999999998876533
Q ss_pred -hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccccc
Q 028043 149 -FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 -~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||...... ...++..+.+++|+.|+.++++++. .+.++||++||.+++.+
T Consensus 85 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~ 153 (257)
T PRK09242 85 HWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTH 153 (257)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCC
Confidence 568999999999854211 2233456678999999999988762 34579999999887654
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.5e-18 Score=142.90 Aligned_cols=125 Identities=16% Similarity=0.201 Sum_probs=97.6
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
+++++|+++||||+||||++++++|+++|++|++++|+.+. . ..+.++.++++|++|++++++.+ +++
T Consensus 2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~--~----~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 75 (252)
T PRK07856 2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE--T----VDGRPAEFHAADVRDPDQVAALVDAIVERHGR 75 (252)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh--h----hcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 34678999999999999999999999999999999998765 1 11346788999999999887643 357
Q ss_pred CcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhcc------CCCeEEEEcccccccc
Q 028043 152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS------SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~------~~~~iV~vSS~~~~~~ 208 (214)
+|+||||||...... ...+...+.+++|+.|+.++++++.+ +.++||++||.++..+
T Consensus 76 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~ 141 (252)
T PRK07856 76 LDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRP 141 (252)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCC
Confidence 899999999764221 12223456779999999999987621 3478999999987654
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.4e-18 Score=142.96 Aligned_cols=126 Identities=18% Similarity=0.116 Sum_probs=96.6
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhhhCCCcEEEecc
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~A 159 (214)
+|+++||||+||||++++++|+++|++|++++|+++..+++.+... +.++.++.+|++|+++++++..+++|+|||||
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~a 81 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNA 81 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECC
Confidence 5799999999999999999999999999999999876655433221 34578899999999999875444899999999
Q ss_pred CCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEccccccc
Q 028043 160 GTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTK 207 (214)
Q Consensus 160 g~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~ 207 (214)
|...... ...+.....+++|+.|+.++++++ +.+.++||++||.++..
T Consensus 82 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~ 137 (257)
T PRK09291 82 GIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLI 137 (257)
T ss_pred CcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhcc
Confidence 9865221 111223456788999988877654 23558999999987643
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.5e-18 Score=149.12 Aligned_cols=130 Identities=14% Similarity=0.192 Sum_probs=98.9
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhH-----HHHHhccc--CCCCEEEEEecCCChhccchhhhC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-----ATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFE 150 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~-----~~~~~~~~--~~~~~~~v~~Di~d~~~v~~~~~~ 150 (214)
.+.++|+||||||+|+||++++++|+++|++|++++|+.+. ++.+.... ...+++++.+|++|.++++++ +.
T Consensus 2 ~~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~ 80 (340)
T PLN02653 2 GDPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRW-LD 80 (340)
T ss_pred CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHH-HH
Confidence 34568999999999999999999999999999999987542 22221111 123578899999999998864 43
Q ss_pred --CCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CCC-----eEEEEccccccccC
Q 028043 151 --GVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLK-----RIVLVSSVGVTKFN 209 (214)
Q Consensus 151 --~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~~-----~iV~vSS~~~~~~~ 209 (214)
++|+|||+||..... ...+.+...+++|+.|+.++++++++ +.+ ++|++||.++|+..
T Consensus 81 ~~~~d~Vih~A~~~~~~-~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~ 146 (340)
T PLN02653 81 DIKPDEVYNLAAQSHVA-VSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGST 146 (340)
T ss_pred HcCCCEEEECCcccchh-hhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCC
Confidence 589999999986532 22234556678999999999998853 433 89999999888754
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.6e-18 Score=142.89 Aligned_cols=128 Identities=13% Similarity=0.166 Sum_probs=97.2
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
+++|+++||||+|+||++++++|+++|++|++++|++++.++..+.+. +..+.++++|++|.+++++++ +++
T Consensus 5 ~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 84 (262)
T PRK13394 5 LNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGS 84 (262)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 568999999999999999999999999999999999877666544432 345778999999999887633 356
Q ss_pred CcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHH----Hh-c-cCCCeEEEEccccccc
Q 028043 152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVS----AL-P-SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~----a~-~-~~~~~iV~vSS~~~~~ 207 (214)
+|+||||||...... ..++.....+++|+.++..+++ ++ + .+.++||++||..+..
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~ 149 (262)
T PRK13394 85 VDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHE 149 (262)
T ss_pred CCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcC
Confidence 999999999864221 1223345567899999655554 44 3 3568999999986654
|
|
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.5e-18 Score=146.60 Aligned_cols=113 Identities=28% Similarity=0.475 Sum_probs=93.5
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccCCC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT 162 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag~~ 162 (214)
|+|+||||||+||++++++|+++|++|++++|+.++...+. ..+++++.+|++|++++.+ .+.++|+|||+++..
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~----~~~v~~v~~Dl~d~~~l~~-al~g~d~Vi~~~~~~ 75 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLK----EWGAELVYGDLSLPETLPP-SFKGVTAIIDASTSR 75 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHh----hcCCEEEECCCCCHHHHHH-HHCCCCEEEECCCCC
Confidence 47999999999999999999999999999999976554332 2468899999999999986 478899999998643
Q ss_pred CCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEcccccc
Q 028043 163 AFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVT 206 (214)
Q Consensus 163 ~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~ 206 (214)
. .+.....++|+.|+.+++++++ .+++++|++||.++.
T Consensus 76 ~------~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~ 114 (317)
T CHL00194 76 P------SDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAE 114 (317)
T ss_pred C------CCccchhhhhHHHHHHHHHHHHHcCCCEEEEecccccc
Confidence 2 2334467899999999999985 588999999997554
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.5e-18 Score=148.16 Aligned_cols=121 Identities=24% Similarity=0.415 Sum_probs=96.4
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHH-hcccC--CCCEEEEEecCCChhccchhhhCCCcEEE
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTL-FGKQD--EETLQVCKGDTRNPKDLDPAIFEGVTHVI 156 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~-~~~~~--~~~~~~v~~Di~d~~~v~~~~~~~~d~li 156 (214)
.++|+|+||||+|+||++++++|+++|++|++++|+.+..... ...+. ..+++++.+|++|.+++.+ ++.++|+||
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~-~~~~~d~Vi 86 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKA-AIDGCDGVF 86 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHH-HHhcCCEEE
Confidence 4678999999999999999999999999999999986543211 11111 2357889999999999886 467899999
Q ss_pred eccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEcccc-ccc
Q 028043 157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVG-VTK 207 (214)
Q Consensus 157 ~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~-~~~ 207 (214)
|+||... .+....+++|+.|+.+++++++ .+.++||++||.+ .|+
T Consensus 87 h~A~~~~------~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg 133 (342)
T PLN02214 87 HTASPVT------DDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYM 133 (342)
T ss_pred EecCCCC------CCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeec
Confidence 9999642 2345678999999999999984 5778999999974 554
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.5e-18 Score=147.92 Aligned_cols=126 Identities=17% Similarity=0.177 Sum_probs=98.7
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCC-CeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
++|+++||||++|||++++++|+++| ++|++++|+.++.+++.+++. +..+.++.+|++|.+++++++ +++
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~ 81 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRP 81 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 46899999999999999999999999 999999999888776655443 345778899999999887643 357
Q ss_pred CcEEEeccCCCCCC----CCCCCCCCchhHHHHHHHHHHHHHh----ccC---CCeEEEEcccccc
Q 028043 152 VTHVICCTGTTAFP----SRRWDGDNTPEKVDWEGVRNLVSAL----PSS---LKRIVLVSSVGVT 206 (214)
Q Consensus 152 ~d~li~~Ag~~~~~----~~~~~~~~~~~~vNv~g~~~l~~a~----~~~---~~~iV~vSS~~~~ 206 (214)
+|++|||||+.... ....+..+..+++|+.|++.+++++ ++. .++||++||.+++
T Consensus 82 iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~ 147 (314)
T TIGR01289 82 LDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGN 147 (314)
T ss_pred CCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccc
Confidence 99999999975321 1122334566799999999988765 222 3699999999775
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.9e-18 Score=148.92 Aligned_cols=122 Identities=15% Similarity=0.144 Sum_probs=96.8
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHC-CCeEEEEEcChhHHHHHhcccCCCCEEEEEecCC-ChhccchhhhCCCcEEEecc
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTR-NPKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~-d~~~v~~~~~~~~d~li~~A 159 (214)
+|+|+||||+|+||++++++|+++ |++|++++|+.+....+. ...+++++.+|++ +.+.+.+ ++.++|+|||+|
T Consensus 1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~-~~~~~d~ViH~a 76 (347)
T PRK11908 1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLV---NHPRMHFFEGDITINKEWIEY-HVKKCDVILPLV 76 (347)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhc---cCCCeEEEeCCCCCCHHHHHH-HHcCCCEEEECc
Confidence 368999999999999999999986 799999999776544332 1346889999998 6666665 467899999999
Q ss_pred CCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEEcccccccc
Q 028043 160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 160 g~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~vSS~~~~~~ 208 (214)
+.... .....++...+++|+.|+.++++++++..+++|++||..+|+.
T Consensus 77 a~~~~-~~~~~~p~~~~~~n~~~~~~ll~aa~~~~~~~v~~SS~~vyg~ 124 (347)
T PRK11908 77 AIATP-ATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYGM 124 (347)
T ss_pred ccCCh-HHhhcCcHHHHHHHHHHHHHHHHHHHhcCCeEEEEecceeecc
Confidence 97652 2233455667899999999999998654479999999998874
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.9e-18 Score=143.33 Aligned_cols=129 Identities=13% Similarity=0.107 Sum_probs=101.5
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
.+++|+++||||+||||+++++.|+++|++|++++|++++.+++.+.+. +.++.++.+|++|++++++++ ++
T Consensus 7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 86 (263)
T PRK07814 7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFG 86 (263)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 3578999999999999999999999999999999999887766544332 346788999999999887633 35
Q ss_pred CCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc------cCCCeEEEEccccccc
Q 028043 151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP------SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~------~~~~~iV~vSS~~~~~ 207 (214)
++|+||||||...... ...++....+++|+.++.++++++. .+.++||++||.++..
T Consensus 87 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~ 152 (263)
T PRK07814 87 RLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRL 152 (263)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccC
Confidence 8999999999754211 2223446677999999999999873 3457899999987654
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.7e-18 Score=142.46 Aligned_cols=131 Identities=15% Similarity=0.105 Sum_probs=100.9
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
+.+++|+++||||+|+||++++++|+++|++|++++|++++.++..+.+. +.++.++.+|++|.+++++.+ +
T Consensus 3 ~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 82 (253)
T PRK06172 3 MTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAY 82 (253)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 34578999999999999999999999999999999999877665443332 346788999999999887632 4
Q ss_pred CCCcEEEeccCCCCCC----CCCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 150 EGVTHVICCTGTTAFP----SRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~----~~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
+++|++|||||..... ....++..+.+++|+.++..+++++ +.+.+++|++||..++.+
T Consensus 83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~ 150 (253)
T PRK06172 83 GRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGA 150 (253)
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccC
Confidence 5789999999975321 1223344566789999998887754 234578999999887654
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.1e-18 Score=142.07 Aligned_cols=127 Identities=18% Similarity=0.174 Sum_probs=97.7
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCCCc
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGVT 153 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~~d 153 (214)
+|+++||||+||||++++++|+++|++|++++|+.++.+++..++. +.++.++++|++|++++++.+ ++++|
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 81 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN 81 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 6899999999999999999999999999999999877666544432 346778999999999887633 45799
Q ss_pred EEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc----c--CCCeEEEEcccccccc
Q 028043 154 HVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP----S--SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 154 ~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~----~--~~~~iV~vSS~~~~~~ 208 (214)
+||||||...... ...+..+..+++|+.++..+++++. . ..++||++||..+..+
T Consensus 82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~ 145 (256)
T PRK08643 82 VVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVG 145 (256)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccC
Confidence 9999999764211 1122345667899999988887662 2 2368999999876543
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.3e-18 Score=147.77 Aligned_cols=126 Identities=24% Similarity=0.357 Sum_probs=96.3
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHh--cccC-CCCEEEEEecCCChhccchhhhCCCcEEE
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF--GKQD-EETLQVCKGDTRNPKDLDPAIFEGVTHVI 156 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~--~~~~-~~~~~~v~~Di~d~~~v~~~~~~~~d~li 156 (214)
+++|+|+||||+|+||++++++|+++|++|++++|+.+...... ..+. ..+++++.+|++|.+++.+ .++++|+||
T Consensus 7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~-~~~~~d~vi 85 (338)
T PLN00198 7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEA-PIAGCDLVF 85 (338)
T ss_pred CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHH-HHhcCCEEE
Confidence 45789999999999999999999999999999988765432211 1111 1257889999999998886 467899999
Q ss_pred eccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc--CCCeEEEEcccccccc
Q 028043 157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS--SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 157 ~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~--~~~~iV~vSS~~~~~~ 208 (214)
|+||.... ...+.....+++|+.|+.++++++.+ +.++||++||.++|+.
T Consensus 86 h~A~~~~~--~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~ 137 (338)
T PLN00198 86 HVATPVNF--ASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSI 137 (338)
T ss_pred EeCCCCcc--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeec
Confidence 99996421 11111234568999999999998843 4789999999988863
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.6e-18 Score=152.91 Aligned_cols=131 Identities=16% Similarity=0.150 Sum_probs=96.2
Q ss_pred CCCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChh--------------------HHHHHhcccCCCCEEEEEe
Q 028043 77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE--------------------KATTLFGKQDEETLQVCKG 136 (214)
Q Consensus 77 ~~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~--------------------~~~~~~~~~~~~~~~~v~~ 136 (214)
....++|+|+||||+||||++++++|+++|++|++++|... .++... .....+++++.+
T Consensus 42 ~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~v~~v~~ 120 (442)
T PLN02572 42 SSSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWK-EVSGKEIELYVG 120 (442)
T ss_pred CccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHH-HhhCCcceEEEC
Confidence 35678899999999999999999999999999999875211 011110 011235889999
Q ss_pred cCCChhccchhhhC-CCcEEEeccCCCCCCCCCC--CCCCchhHHHHHHHHHHHHHhcc-CCC-eEEEEcccccccc
Q 028043 137 DTRNPKDLDPAIFE-GVTHVICCTGTTAFPSRRW--DGDNTPEKVDWEGVRNLVSALPS-SLK-RIVLVSSVGVTKF 208 (214)
Q Consensus 137 Di~d~~~v~~~~~~-~~d~li~~Ag~~~~~~~~~--~~~~~~~~vNv~g~~~l~~a~~~-~~~-~iV~vSS~~~~~~ 208 (214)
|++|.+.+++++-+ ++|+|||+|+....+.... ++....+++|+.|+.+++++++. +++ ++|++||.++||.
T Consensus 121 Dl~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~ 197 (442)
T PLN02572 121 DICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGT 197 (442)
T ss_pred CCCCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCC
Confidence 99999999874322 6999999998754221111 12234468999999999999854 664 8999999999874
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.7e-18 Score=142.40 Aligned_cols=129 Identities=17% Similarity=0.131 Sum_probs=98.9
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
+.+|+++||||+|+||++++++|+++|++|++++|++++.++...++. +.++.++.+|++|++++++++ +++
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 81 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG 81 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 457899999999999999999999999999999999887766544432 356888999999999887643 347
Q ss_pred CcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
+|+||||||...... ...+.....+++|+.|+.++++++ +.+.++||++||.+++.+
T Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~ 146 (258)
T PRK12429 82 VDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVG 146 (258)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccC
Confidence 999999999765321 111223445678999987777765 235689999999876543
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=9.8e-19 Score=146.13 Aligned_cols=128 Identities=9% Similarity=0.072 Sum_probs=95.6
Q ss_pred CCCCCCEEEEEcCch--HHHHHHHHHHHHCCCeEEEEEcChhHHH---HHhcccCCCCEEEEEecCCChhccchhh----
Q 028043 78 PASSSKLVLVAGGSG--GVGQLVVASLLSRNIKSRLLLRDPEKAT---TLFGKQDEETLQVCKGDTRNPKDLDPAI---- 148 (214)
Q Consensus 78 ~~~~~k~vlITGasg--gIG~~la~~L~~~G~~V~~~~r~~~~~~---~~~~~~~~~~~~~v~~Di~d~~~v~~~~---- 148 (214)
..+++|+++||||++ |||+++|++|+++|++|++.+|+....+ ++.+.. + ....+++|++|++++++++
T Consensus 3 ~~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~-g-~~~~~~~Dv~d~~~v~~~~~~~~ 80 (271)
T PRK06505 3 GLMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESL-G-SDFVLPCDVEDIASVDAVFEALE 80 (271)
T ss_pred cccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhc-C-CceEEeCCCCCHHHHHHHHHHHH
Confidence 346789999999997 9999999999999999999998764332 222222 1 2346889999999988643
Q ss_pred --hCCCcEEEeccCCCCCC-------CCCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEccccccc
Q 028043 149 --FEGVTHVICCTGTTAFP-------SRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTK 207 (214)
Q Consensus 149 --~~~~d~li~~Ag~~~~~-------~~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~ 207 (214)
++++|+||||||..... ..+.+++...+++|+.++.++++++.+ ..++||++||.++..
T Consensus 81 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~ 151 (271)
T PRK06505 81 KKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTR 151 (271)
T ss_pred HHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccc
Confidence 57899999999975321 122334566779999999999887632 236899999987643
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.3e-18 Score=143.56 Aligned_cols=127 Identities=16% Similarity=0.190 Sum_probs=100.4
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
.+.+|+++||||+||||++++++|+++|++|++++|+.+..+++.+.+ ...+.++.+|++|++++++++ ++++
T Consensus 3 ~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (257)
T PRK07067 3 RLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI-GPAAIAVSLDVTRQDSIDRIVAAAVERFGGI 81 (257)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh-CCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 356799999999999999999999999999999999998877765544 245788999999999987643 3579
Q ss_pred cEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhcc------CCCeEEEEcccccc
Q 028043 153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS------SLKRIVLVSSVGVT 206 (214)
Q Consensus 153 d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~------~~~~iV~vSS~~~~ 206 (214)
|+||||||...... ..+++....+++|+.++.++++++.+ ..++||++||..+.
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~ 144 (257)
T PRK07067 82 DILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGR 144 (257)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhC
Confidence 99999999764211 22334566788999999999998732 13589999997654
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.3e-18 Score=143.58 Aligned_cols=122 Identities=18% Similarity=0.180 Sum_probs=96.7
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCCcEE
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVTHV 155 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~d~l 155 (214)
+|+++||||+||||++++++|+++|++|++++|+.++.+++.. .++.++.+|++|.+++++.+ ++++|+|
T Consensus 1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~v 76 (274)
T PRK05693 1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAA----AGFTAVQLDVNDGAALARLAEELEAEHGGLDVL 76 (274)
T ss_pred CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 4789999999999999999999999999999999887766542 34678899999999887633 3579999
Q ss_pred EeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh----ccCCCeEEEEccccccc
Q 028043 156 ICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTK 207 (214)
Q Consensus 156 i~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~----~~~~~~iV~vSS~~~~~ 207 (214)
|||||...... ..+++....+++|+.|+.++++++ +.+.++||++||.++..
T Consensus 77 i~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~ 135 (274)
T PRK05693 77 INNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVL 135 (274)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccC
Confidence 99999764221 222344567799999999999876 23457899999987654
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1e-18 Score=147.03 Aligned_cols=128 Identities=13% Similarity=0.107 Sum_probs=98.0
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh---------hHHHHHhcccC--CCCEEEEEecCCChhccchhh
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP---------EKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI 148 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~---------~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~ 148 (214)
+++|+++||||++|||++++++|++.|++|++++|+. +.++++.+++. +.++.++.+|++|++++++.+
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 83 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV 83 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence 5689999999999999999999999999999998865 55555444332 345778899999999887633
Q ss_pred ------hCCCcEEEeccCCCCCC---CCCCCCCCchhHHHHHHHHHHHHHhc----cC-------CCeEEEEccccccc
Q 028043 149 ------FEGVTHVICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSALP----SS-------LKRIVLVSSVGVTK 207 (214)
Q Consensus 149 ------~~~~d~li~~Ag~~~~~---~~~~~~~~~~~~vNv~g~~~l~~a~~----~~-------~~~iV~vSS~~~~~ 207 (214)
++++|+||||||..... ....++....+++|+.|++++++++. .. .++||++||.++..
T Consensus 84 ~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~ 162 (286)
T PRK07791 84 DAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQ 162 (286)
T ss_pred HHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCc
Confidence 46899999999986421 12223446678999999999988662 11 25899999987754
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.9e-18 Score=141.62 Aligned_cols=129 Identities=13% Similarity=0.174 Sum_probs=96.5
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEE-EEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRL-LLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~-~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
+.+|+++||||+||||++++++|+++|++|++ .+|+.++.+++.+++. +.++.++.+|++|++++++++ ++
T Consensus 2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG 81 (250)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 35689999999999999999999999999876 4787776655544332 346788999999999887643 35
Q ss_pred CCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccccc
Q 028043 151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~ 208 (214)
++|+||||||...... ...+.....+++|+.++.++++++. .+.++||++||..+..+
T Consensus 82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~ 147 (250)
T PRK08063 82 RLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRY 147 (250)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccC
Confidence 7999999999754221 1112223456899999999998772 34569999999876543
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.9e-18 Score=142.77 Aligned_cols=130 Identities=15% Similarity=0.171 Sum_probs=98.2
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
..+++|+++||||+||||++++++|++.|++|++++|+ ++.+++.+.+. +.++.++++|++|.+++++.+ +
T Consensus 11 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 89 (258)
T PRK06935 11 FSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEF 89 (258)
T ss_pred ccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 44678999999999999999999999999999999998 33333332221 346788999999999887633 4
Q ss_pred CCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccccc
Q 028043 150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~ 208 (214)
+++|++|||||...... ...++.+..+++|+.++.++++++. .+.++||++||..++.+
T Consensus 90 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 156 (258)
T PRK06935 90 GKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQG 156 (258)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccC
Confidence 57999999999864211 1222345667899999988888662 34579999999987643
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.7e-18 Score=141.56 Aligned_cols=126 Identities=20% Similarity=0.226 Sum_probs=95.8
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChh-HHHHHhcccCCCCEEEEEecCCChhccchhh------hC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-KATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
+.+.+|+++||||+||||++++++|+++|++|++++++.+ ..+++.. .++.++.+|++|++++++++ ++
T Consensus 3 ~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 78 (255)
T PRK06463 3 MRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELRE----KGVFTIKCDVGNRDQVKKSKEVVEKEFG 78 (255)
T ss_pred CCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHh----CCCeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 3457899999999999999999999999999998876543 3333332 24778999999999988743 45
Q ss_pred CCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh----c-cCCCeEEEEccccccc
Q 028043 151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~----~-~~~~~iV~vSS~~~~~ 207 (214)
++|+||||||...... ...++....+++|+.|+.++++++ + .+.++||++||.++++
T Consensus 79 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~ 143 (255)
T PRK06463 79 RVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIG 143 (255)
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCC
Confidence 7999999999864211 222344567899999988777654 2 3457999999988764
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.9e-18 Score=141.00 Aligned_cols=131 Identities=13% Similarity=0.103 Sum_probs=100.6
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
+++++|+++||||+||||++++++|+++|++|++++|+.++.+++.+++. +..+..+++|++|.+++++++ +
T Consensus 4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (252)
T PRK07035 4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERH 83 (252)
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 35678999999999999999999999999999999999887766554432 335778999999999887533 4
Q ss_pred CCCcEEEeccCCCCCC----CCCCCCCCchhHHHHHHHHHHHHHh----c-cCCCeEEEEcccccccc
Q 028043 150 EGVTHVICCTGTTAFP----SRRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~----~~~~~~~~~~~~vNv~g~~~l~~a~----~-~~~~~iV~vSS~~~~~~ 208 (214)
+++|+||||||..... ....++....+++|+.++.++++++ + .+.++||++||..+..+
T Consensus 84 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~ 151 (252)
T PRK07035 84 GRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSP 151 (252)
T ss_pred CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCC
Confidence 5799999999964311 1222233557789999999888866 2 34579999999876543
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.2e-18 Score=143.80 Aligned_cols=130 Identities=18% Similarity=0.187 Sum_probs=100.3
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
++.+|+++||||+||||++++++|+++|++|++++|+.+..+++.+++. +.++.++++|++|++++++++ ++
T Consensus 7 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 86 (278)
T PRK08277 7 SLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFG 86 (278)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4578999999999999999999999999999999999877766554432 345788999999999887633 46
Q ss_pred CCcEEEeccCCCCCCC------------------CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEccccccc
Q 028043 151 GVTHVICCTGTTAFPS------------------RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTK 207 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~------------------~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~ 207 (214)
++|+||||||...... ...++....+++|+.++..+++++ +.+.++||++||.+++.
T Consensus 87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~ 166 (278)
T PRK08277 87 PCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFT 166 (278)
T ss_pred CCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcC
Confidence 8999999999653211 111233456789999998877755 23457999999998876
Q ss_pred c
Q 028043 208 F 208 (214)
Q Consensus 208 ~ 208 (214)
+
T Consensus 167 ~ 167 (278)
T PRK08277 167 P 167 (278)
T ss_pred C
Confidence 4
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.1e-18 Score=145.98 Aligned_cols=130 Identities=12% Similarity=0.100 Sum_probs=99.1
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChh--HHHHHhcccC--CCCEEEEEecCCChhccchhh------
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE--KATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~--~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
.+++|+++||||+||||++++++|+++|++|+++.++.+ ..+++.+.+. +.++.++.+|++|.+++++++
T Consensus 52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 131 (300)
T PRK06128 52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKE 131 (300)
T ss_pred ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999999998877543 2333322221 345778999999999887643
Q ss_pred hCCCcEEEeccCCCCCC----CCCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEcccccccc
Q 028043 149 FEGVTHVICCTGTTAFP----SRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~----~~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||..... ....++....+++|+.|++++++++.+ ..++||++||.+++.+
T Consensus 132 ~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~ 198 (300)
T PRK06128 132 LGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQP 198 (300)
T ss_pred hCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCC
Confidence 46899999999975321 123345567789999999999998743 2369999999988754
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=3e-18 Score=139.72 Aligned_cols=128 Identities=9% Similarity=0.033 Sum_probs=96.7
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
++++|+++||||++|||++++++|+++|++|++++|++++++++.+++. +.++..+.+|++|++++++++ ++
T Consensus 2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 81 (227)
T PRK08862 2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFN 81 (227)
T ss_pred CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 4578999999999999999999999999999999999988777654332 345677889999999988633 46
Q ss_pred -CCcEEEeccCCCCCCC----CCCCCCCchhHHHHHHHHHHHHHh----c-cC-CCeEEEEcccccc
Q 028043 151 -GVTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSAL----P-SS-LKRIVLVSSVGVT 206 (214)
Q Consensus 151 -~~d~li~~Ag~~~~~~----~~~~~~~~~~~vNv~g~~~l~~a~----~-~~-~~~iV~vSS~~~~ 206 (214)
++|++|||||....+. ..+++..+.+++|+.++..+++++ + .+ .+.||++||..+.
T Consensus 82 ~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~ 148 (227)
T PRK08862 82 RAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH 148 (227)
T ss_pred CCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC
Confidence 8999999998643221 112223445677888888777654 2 22 4799999997654
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.5e-18 Score=141.76 Aligned_cols=129 Identities=10% Similarity=0.044 Sum_probs=101.5
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
..+.+|+++||||+|+||++++++|+++|++|++++|+++++++..+.+. +.++.++++|++|++++++++ +
T Consensus 6 ~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 85 (265)
T PRK07097 6 FSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEV 85 (265)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 45678999999999999999999999999999999999887766544432 346788999999999988743 3
Q ss_pred CCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccc
Q 028043 150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVT 206 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~ 206 (214)
+++|+||||||...... ..++.....+++|+.|+..+++++. .+.++||++||..+.
T Consensus 86 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~ 150 (265)
T PRK07097 86 GVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSE 150 (265)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCcccc
Confidence 57999999999865321 2233445667899999998888762 356799999997654
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.77 E-value=5.2e-18 Score=146.59 Aligned_cols=127 Identities=24% Similarity=0.354 Sum_probs=97.8
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC-CCCEEEEEecCCChhccchhhhCCCcEEEecc
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~A 159 (214)
.+|+||||||+|+||++++++|+++|++|++++|+.+..+.+...+. ..+++++.+|++|.+.+.++ +.++|+|||+|
T Consensus 9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~Vih~A 87 (353)
T PLN02896 9 ATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEA-VKGCDGVFHVA 87 (353)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHH-HcCCCEEEECC
Confidence 56899999999999999999999999999999998766554433221 34688899999999998874 67899999999
Q ss_pred CCCCCCC-CCCCCCCc-----hhHHHHHHHHHHHHHhc-c-CCCeEEEEcccccccc
Q 028043 160 GTTAFPS-RRWDGDNT-----PEKVDWEGVRNLVSALP-S-SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 160 g~~~~~~-~~~~~~~~-----~~~vNv~g~~~l~~a~~-~-~~~~iV~vSS~~~~~~ 208 (214)
|...... ....+... .+++|+.|+.++++++. . +.++||++||.++|+.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~ 144 (353)
T PLN02896 88 ASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTA 144 (353)
T ss_pred ccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccc
Confidence 9865321 11122222 33456799999999884 4 3689999999998863
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.6e-18 Score=141.50 Aligned_cols=129 Identities=20% Similarity=0.222 Sum_probs=100.2
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC-CCCEEEEEecCCChhccchhh-----hCCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAI-----FEGV 152 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~v~~Di~d~~~v~~~~-----~~~~ 152 (214)
.+++++++||||+||||++++++|+++|++|++++|++++.+++.+++. +.++.++.+|++|++++++.. ++++
T Consensus 2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~i 81 (263)
T PRK09072 2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGI 81 (263)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCC
Confidence 3567899999999999999999999999999999999888776654432 346888999999999877632 3579
Q ss_pred cEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEccccccc
Q 028043 153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 153 d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~ 207 (214)
|+||||||...... ...+...+.+++|+.|+.++++++. .+.++||++||..+..
T Consensus 82 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~ 144 (263)
T PRK09072 82 NVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSI 144 (263)
T ss_pred CEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCc
Confidence 99999999864321 1222335567899999999998762 2347899999986643
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.6e-18 Score=142.99 Aligned_cols=109 Identities=13% Similarity=0.115 Sum_probs=85.7
Q ss_pred CCCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChh-HHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEE
Q 028043 77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-KATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHV 155 (214)
Q Consensus 77 ~~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~l 155 (214)
+..+++|+++||||+||||++++++|+++|++|++++|+.. ..+... .. ....+.+|++|.+++++ .++++|++
T Consensus 9 ~~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~---~~-~~~~~~~D~~~~~~~~~-~~~~iDil 83 (245)
T PRK12367 9 QSTWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESND---ES-PNEWIKWECGKEESLDK-QLASLDVL 83 (245)
T ss_pred HHhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhc---cC-CCeEEEeeCCCHHHHHH-hcCCCCEE
Confidence 34567899999999999999999999999999999999873 222211 11 22568899999999886 47899999
Q ss_pred EeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHh
Q 028043 156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL 190 (214)
Q Consensus 156 i~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~ 190 (214)
|||||.........++..+.+++|+.|+.++++++
T Consensus 84 VnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~ 118 (245)
T PRK12367 84 ILNHGINPGGRQDPENINKALEINALSSWRLLELF 118 (245)
T ss_pred EECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 99999864333334455677899999999999976
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.9e-18 Score=141.83 Aligned_cols=126 Identities=19% Similarity=0.215 Sum_probs=94.8
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC-CCCEEEEEecCCChhccchhh------hCCCcEE
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAI------FEGVTHV 155 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~v~~Di~d~~~v~~~~------~~~~d~l 155 (214)
|+++||||+||||++++++|+++|++|++++|+++.+++..+++. ..++.++++|++|++++++++ ++++|+|
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l 80 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL 80 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 479999999999999999999999999999999887766554442 235778999999999888643 4689999
Q ss_pred EeccCCCCCC-----CCCCCCCCchhHHHHHHHHHHHHHh----c--cCCCeEEEEcccccccc
Q 028043 156 ICCTGTTAFP-----SRRWDGDNTPEKVDWEGVRNLVSAL----P--SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 156 i~~Ag~~~~~-----~~~~~~~~~~~~vNv~g~~~l~~a~----~--~~~~~iV~vSS~~~~~~ 208 (214)
|||||..... ...+++..+.+.+|+.++..+++++ . .+.++||++||.++..+
T Consensus 81 i~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~ 144 (259)
T PRK08340 81 VWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEP 144 (259)
T ss_pred EECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCC
Confidence 9999975321 1122233445678888877666543 2 24579999999987643
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=3e-18 Score=142.37 Aligned_cols=130 Identities=16% Similarity=0.154 Sum_probs=99.0
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
+.+++|+++||||+||||++++++|+++|++|++++|+++.+++..+.+. ..++.++.+|++|++++++++ +
T Consensus 5 ~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~ 84 (264)
T PRK07576 5 FDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEF 84 (264)
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 44678999999999999999999999999999999999877655433322 235678899999999887643 3
Q ss_pred CCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc----cCCCeEEEEccccccc
Q 028043 150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~----~~~~~iV~vSS~~~~~ 207 (214)
+++|++|||||...... ...++....+++|+.|+.++++++. +..++||++||.++..
T Consensus 85 ~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~ 149 (264)
T PRK07576 85 GPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFV 149 (264)
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhcc
Confidence 57999999998643211 1222334567899999999998763 2336999999987653
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.4e-18 Score=140.70 Aligned_cols=128 Identities=16% Similarity=0.230 Sum_probs=98.5
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
++.+|+++||||+|+||++++++|+++|++|++++|+++..+. ........+..+.+|++|++++++.+ ++++
T Consensus 12 ~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 90 (255)
T PRK06841 12 DLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEV-AAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRI 90 (255)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 4678999999999999999999999999999999998764332 22333445678999999999887643 3579
Q ss_pred cEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEccccccc
Q 028043 153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 153 d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~ 207 (214)
|+||||||...... ...++....+++|+.|+.++++++. .+.++||++||.++..
T Consensus 91 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~ 153 (255)
T PRK06841 91 DILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVV 153 (255)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhcc
Confidence 99999999864321 1222335567999999999999762 2467999999987643
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.77 E-value=3e-18 Score=140.42 Aligned_cols=128 Identities=14% Similarity=0.098 Sum_probs=96.6
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhH-HHHHhcccCCCCEEEEEecCCChhccchhh------hCCC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-ATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
+++|+++||||+||||++++++|+++|++|++++|+... ..+..... +..+.++++|++|++++++++ ++++
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 81 (248)
T TIGR01832 3 LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEAL-GRRFLSLTADLSDIEAIKALVDSAVEEFGHI 81 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhc-CCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 578999999999999999999999999999999997632 22211111 345788999999999987533 3579
Q ss_pred cEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cC-CCeEEEEcccccccc
Q 028043 153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SS-LKRIVLVSSVGVTKF 208 (214)
Q Consensus 153 d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~-~~~iV~vSS~~~~~~ 208 (214)
|++|||||...... ...+..++.+++|+.++.++++++. ++ .++||++||..++.+
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~ 146 (248)
T TIGR01832 82 DILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQG 146 (248)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccC
Confidence 99999999865211 1222345567899999999998762 22 469999999887654
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.8e-18 Score=141.68 Aligned_cols=130 Identities=21% Similarity=0.194 Sum_probs=100.2
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
..+++|+++||||+|+||++++++|+++|++|++++|+.++.+...+.+. +.++.++.+|++|++++++.+ +
T Consensus 8 ~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~ 87 (259)
T PRK08213 8 FDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERF 87 (259)
T ss_pred hCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 34578999999999999999999999999999999999877666544332 345778999999999986533 3
Q ss_pred CCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc------cCCCeEEEEccccccc
Q 028043 150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP------SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~------~~~~~iV~vSS~~~~~ 207 (214)
+++|++|||||...... ..++...+.+++|+.++.++++++. ++.++||++||..++.
T Consensus 88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~ 154 (259)
T PRK08213 88 GHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLG 154 (259)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhcc
Confidence 57999999999754221 1222335567899999999999762 2457899999987654
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=4.2e-18 Score=140.33 Aligned_cols=130 Identities=12% Similarity=0.077 Sum_probs=102.0
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
..+++|+++||||+|+||++++++|+++|++|++++|+++.++++.+++. +.++.++.+|++|++++.+++ +
T Consensus 7 ~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 86 (256)
T PRK06124 7 FSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEH 86 (256)
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence 45689999999999999999999999999999999999877666544332 345888999999999887643 4
Q ss_pred CCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEccccccc
Q 028043 150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~ 207 (214)
+++|++|||||...... ...++..+.+++|+.|+.++++++. .+.+++|++||..+..
T Consensus 87 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~ 152 (256)
T PRK06124 87 GRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQV 152 (256)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhcc
Confidence 57899999999864211 1223345567899999999997662 3567999999987654
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.8e-18 Score=140.90 Aligned_cols=123 Identities=20% Similarity=0.207 Sum_probs=95.5
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
.+++|+++||||+||||++++++|+++|++|++++|+++... ..++.++++|++|++++++.+ ++++
T Consensus 6 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 78 (260)
T PRK06523 6 ELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDDL-------PEGVEFVAADLTTAEGCAAVARAVLERLGGV 78 (260)
T ss_pred CCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhhc-------CCceeEEecCCCCHHHHHHHHHHHHHHcCCC
Confidence 467899999999999999999999999999999999865321 245778999999999877532 4689
Q ss_pred cEEEeccCCCCCCC-----CCCCCCCchhHHHHHHHHHHHHHh----c-cCCCeEEEEcccccccc
Q 028043 153 THVICCTGTTAFPS-----RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 153 d~li~~Ag~~~~~~-----~~~~~~~~~~~vNv~g~~~l~~a~----~-~~~~~iV~vSS~~~~~~ 208 (214)
|+||||||...... ...++....+++|+.|+.++++++ + .+.++||++||..++.+
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~ 144 (260)
T PRK06523 79 DILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLP 144 (260)
T ss_pred CEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCC
Confidence 99999999653211 122334566789999998887765 2 34578999999887654
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.8e-18 Score=139.22 Aligned_cols=129 Identities=19% Similarity=0.228 Sum_probs=100.5
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
+++|+++||||+|+||++++++|+++|++|++++|++++.++..+++. +.++.++.+|++|++++++++ +++
T Consensus 5 ~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (239)
T PRK07666 5 LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGS 84 (239)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 457899999999999999999999999999999999877665443332 346788999999999887643 358
Q ss_pred CcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccccc
Q 028043 152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~ 208 (214)
+|+||||||...... ..+++..+.+++|+.|+.++++++. .+.+++|++||.+++.+
T Consensus 85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~ 149 (239)
T PRK07666 85 IDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKG 149 (239)
T ss_pred ccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccC
Confidence 999999999864221 1223345667999999999988762 35678999999877654
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.6e-18 Score=139.90 Aligned_cols=128 Identities=18% Similarity=0.195 Sum_probs=99.7
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCCC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
++|+++||||+|+||++++++|+++|++|++++|+.+..+++.+.+. +.++.++.+|++|.+++++++ ++++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 81 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV 81 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 57899999999999999999999999999999999877665543322 346888999999999888743 3579
Q ss_pred cEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 153 d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
|++|||||...... ...+.....+++|+.++.++++++ +.+.++||++||.+++..
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~ 145 (250)
T TIGR03206 82 DVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVG 145 (250)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccC
Confidence 99999999754221 112223456789999999988876 235679999999987654
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=3e-18 Score=145.63 Aligned_cols=127 Identities=13% Similarity=0.056 Sum_probs=94.0
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh----------hHHHHHhcccC--CCCEEEEEecCCChhccch
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP----------EKATTLFGKQD--EETLQVCKGDTRNPKDLDP 146 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~----------~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~ 146 (214)
.+++|+++||||++|||++++++|++.|++|++++|+. ++++++.+.+. +..+.++++|++|++++++
T Consensus 5 ~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~ 84 (305)
T PRK08303 5 PLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRA 84 (305)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHH
Confidence 46789999999999999999999999999999999973 33443333222 3356789999999999886
Q ss_pred hh------hCCCcEEEecc-CCCCC-----CC--CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEccccc
Q 028043 147 AI------FEGVTHVICCT-GTTAF-----PS--RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGV 205 (214)
Q Consensus 147 ~~------~~~~d~li~~A-g~~~~-----~~--~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~ 205 (214)
++ ++++|++|||| |.... +. ...++..+.+++|+.+++.+++++. .+.++||++||..+
T Consensus 85 ~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~ 162 (305)
T PRK08303 85 LVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTA 162 (305)
T ss_pred HHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccc
Confidence 43 56899999999 75311 11 1122334567899999999888662 23479999999654
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.3e-18 Score=140.88 Aligned_cols=126 Identities=18% Similarity=0.239 Sum_probs=98.6
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCCCc
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGVT 153 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~~d 153 (214)
+|+++||||+||||++++++|+++|++|++++|+.++.+++.+.+. +.++.++++|++|++++++++ ++++|
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID 80 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence 5899999999999999999999999999999999887766544332 346788999999999887633 46799
Q ss_pred EEEeccCCCCC-C--CCCCCCCCchhHHHHHHHHHHHHHhc-----cC-CCeEEEEccccccc
Q 028043 154 HVICCTGTTAF-P--SRRWDGDNTPEKVDWEGVRNLVSALP-----SS-LKRIVLVSSVGVTK 207 (214)
Q Consensus 154 ~li~~Ag~~~~-~--~~~~~~~~~~~~vNv~g~~~l~~a~~-----~~-~~~iV~vSS~~~~~ 207 (214)
+||||||.... + ....+++.+.+++|+.|++++++++. .. .++||++||..++.
T Consensus 81 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~ 143 (252)
T PRK07677 81 ALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWD 143 (252)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhcc
Confidence 99999996432 1 11223345678999999999999772 22 36899999987754
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=99.77 E-value=4.2e-18 Score=138.98 Aligned_cols=128 Identities=20% Similarity=0.214 Sum_probs=100.2
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
++++|+++||||+|+||++++++|+++|+.|++.+|+.++++++.... +.++.++.+|++|.+++++++ ++++
T Consensus 3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (245)
T PRK12936 3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL-GERVKIFPANLSDRDEVKALGQKAEADLEGV 81 (245)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-CCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 356789999999999999999999999999999999988877655433 346788999999999887632 4679
Q ss_pred cEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEccccccc
Q 028043 153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 153 d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~ 207 (214)
|+||||||...... ...++....+++|+.++.++++++. ++.++||++||.++..
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~ 144 (245)
T PRK12936 82 DILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVT 144 (245)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCc
Confidence 99999999864211 1223345667899999999988762 3567899999986654
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.3e-18 Score=138.84 Aligned_cols=130 Identities=21% Similarity=0.239 Sum_probs=100.0
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
.+++|+++||||+|+||++++++|+++|++|++++|++++..+..+.+....++.+.+|++|.+++++++ ++++
T Consensus 4 ~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 83 (239)
T PRK12828 4 SLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRL 83 (239)
T ss_pred CCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCc
Confidence 4568999999999999999999999999999999998876555443333445678889999999887633 4579
Q ss_pred cEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 153 d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
|+|||+||...... ...+...+.+++|+.++.++++++ +.+.++||++||..++.+
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~ 147 (239)
T PRK12828 84 DALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKA 147 (239)
T ss_pred CEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccC
Confidence 99999999754211 112223455689999999998876 235789999999987654
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.5e-18 Score=140.98 Aligned_cols=129 Identities=12% Similarity=0.107 Sum_probs=97.6
Q ss_pred CCCCCEEEEEcCc--hHHHHHHHHHHHHCCCeEEEEEcC---hhHHHHHhcccCCCCEEEEEecCCChhccchhh-----
Q 028043 79 ASSSKLVLVAGGS--GGVGQLVVASLLSRNIKSRLLLRD---PEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI----- 148 (214)
Q Consensus 79 ~~~~k~vlITGas--ggIG~~la~~L~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~----- 148 (214)
++.+|+++||||+ +|||++++++|+++|++|++++|+ .+.++++.+++.+.++.++++|++|++++++++
T Consensus 4 ~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 83 (257)
T PRK08594 4 SLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKE 83 (257)
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHH
Confidence 3568999999997 899999999999999999999765 344555555444456788999999999988643
Q ss_pred -hCCCcEEEeccCCCCC-----C--CCCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEccccccc
Q 028043 149 -FEGVTHVICCTGTTAF-----P--SRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTK 207 (214)
Q Consensus 149 -~~~~d~li~~Ag~~~~-----~--~~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~ 207 (214)
++++|++|||||.... + ..+.+.....+++|+.++.++++++.+ ..++||++||.++..
T Consensus 84 ~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~ 153 (257)
T PRK08594 84 EVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGER 153 (257)
T ss_pred hCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCcc
Confidence 4689999999997531 1 112223345678999999988887632 236899999987754
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.4e-18 Score=144.49 Aligned_cols=130 Identities=13% Similarity=0.107 Sum_probs=98.5
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh--hHHHHHhcccC--CCCEEEEEecCCChhccchhh------
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP--EKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~--~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
.+++|+++||||+||||++++++|+++|++|++.+|+. +..+++.+.+. +.++.++.+|++|++++++++
T Consensus 46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 125 (294)
T PRK07985 46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA 125 (294)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999987643 33334332221 345778999999999887633
Q ss_pred hCCCcEEEeccCCCCC----CCCCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEcccccccc
Q 028043 149 FEGVTHVICCTGTTAF----PSRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~----~~~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~~ 208 (214)
++++|++|||||.... ....+++..+.+++|+.|+.++++++.+ ..++||++||.+++.+
T Consensus 126 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~ 192 (294)
T PRK07985 126 LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQP 192 (294)
T ss_pred hCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccC
Confidence 5689999999997431 1123345567789999999999998732 2368999999988754
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.8e-18 Score=139.42 Aligned_cols=128 Identities=19% Similarity=0.183 Sum_probs=99.3
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCCC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
++|+++||||+|+||++++++|+++|++|++++|++++.+++.+.+. +.++.++.+|++|++++.+++ ++++
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP 84 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 46899999999999999999999999999999999877666544332 346788999999999877633 3579
Q ss_pred cEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 153 d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
|+||||||...... ...++....+++|+.++.++++++ +.+.++||++||..++.+
T Consensus 85 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~ 148 (241)
T PRK07454 85 DVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNA 148 (241)
T ss_pred CEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcC
Confidence 99999999764211 122334556789999999988865 234578999999987654
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.2e-18 Score=146.45 Aligned_cols=127 Identities=17% Similarity=0.183 Sum_probs=95.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC----CCCEEEEEecCCC--hhccchh--hhC--
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRN--PKDLDPA--IFE-- 150 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~v~~Di~d--~~~v~~~--~~~-- 150 (214)
.|++++||||+||||++++++|+++|++|++++|++++++++.+++. +.++..+.+|+++ .+.+++. .++
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~ 131 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGL 131 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence 58999999999999999999999999999999999998877655442 2356778899985 2222221 134
Q ss_pred CCcEEEeccCCCCCC-----CCCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEccccccc
Q 028043 151 GVTHVICCTGTTAFP-----SRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTK 207 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~-----~~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~ 207 (214)
++|++|||||..... ...+++....+++|+.|+.++++++ +++.++||++||.+++.
T Consensus 132 didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~ 198 (320)
T PLN02780 132 DVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIV 198 (320)
T ss_pred CccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhcc
Confidence 366999999986421 1222334567899999999999876 23567999999988753
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=5.6e-18 Score=138.63 Aligned_cols=129 Identities=19% Similarity=0.146 Sum_probs=100.1
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
+.+|+++||||+|+||++++++|+++|++|++++|++++.++..+.+. +.++.++.+|++|++++++.+ +++
T Consensus 5 ~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 84 (250)
T PRK12939 5 LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGG 84 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 567999999999999999999999999999999999887766544332 346888999999999887643 357
Q ss_pred CcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccccc
Q 028043 152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~ 208 (214)
+|+||||||...... ...+.....+++|+.++.++++++. .+.+++|++||.+++.+
T Consensus 85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~ 149 (250)
T PRK12939 85 LDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWG 149 (250)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccC
Confidence 999999999865321 1222334556899999999998762 23569999999876543
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.6e-18 Score=141.43 Aligned_cols=130 Identities=14% Similarity=0.149 Sum_probs=95.4
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEc-ChhHHHHHhcccC---CCCEEEEEecCCChhccchhh-----
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-DPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAI----- 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r-~~~~~~~~~~~~~---~~~~~~v~~Di~d~~~v~~~~----- 148 (214)
..+++|+++||||++|||++++++|+++|++|++++| +++.+++..+++. +.++.++.+|++|++++++.+
T Consensus 4 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 83 (260)
T PRK08416 4 NEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDE 83 (260)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 3467899999999999999999999999999998865 5555554433322 346788999999999887643
Q ss_pred -hCCCcEEEeccCCCCC-------C--CCCCCCCCchhHHHHHHHHHHHHHh----c-cCCCeEEEEccccccc
Q 028043 149 -FEGVTHVICCTGTTAF-------P--SRRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 149 -~~~~d~li~~Ag~~~~-------~--~~~~~~~~~~~~vNv~g~~~l~~a~----~-~~~~~iV~vSS~~~~~ 207 (214)
++++|+||||||.... + ....+.....+++|+.+...+++++ + .+.++||++||.++..
T Consensus 84 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~ 157 (260)
T PRK08416 84 DFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLV 157 (260)
T ss_pred hcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEecccccc
Confidence 4679999999986421 1 0112233556788998888777755 2 2346999999987643
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.6e-18 Score=141.50 Aligned_cols=128 Identities=12% Similarity=0.086 Sum_probs=96.7
Q ss_pred CCCCCCEEEEEcCc--hHHHHHHHHHHHHCCCeEEEEEcChhH---HHHHhcccCCCCEEEEEecCCChhccchhh----
Q 028043 78 PASSSKLVLVAGGS--GGVGQLVVASLLSRNIKSRLLLRDPEK---ATTLFGKQDEETLQVCKGDTRNPKDLDPAI---- 148 (214)
Q Consensus 78 ~~~~~k~vlITGas--ggIG~~la~~L~~~G~~V~~~~r~~~~---~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~---- 148 (214)
+++++|+++||||+ +|||++++++|+++|++|++++|+.+. ++++.+++. ...++.+|++|++++++++
T Consensus 6 ~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~~~ 83 (258)
T PRK07533 6 LPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELD--APIFLPLDVREPGQLEAVFARIA 83 (258)
T ss_pred cccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhc--cceEEecCcCCHHHHHHHHHHHH
Confidence 45678999999998 599999999999999999999998643 333333332 3457899999999988633
Q ss_pred --hCCCcEEEeccCCCCCC-------CCCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEccccccc
Q 028043 149 --FEGVTHVICCTGTTAFP-------SRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTK 207 (214)
Q Consensus 149 --~~~~d~li~~Ag~~~~~-------~~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~ 207 (214)
++++|++|||||..... ....++.++.+++|+.|+.++++++.+ ..++||++||.++..
T Consensus 84 ~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~ 154 (258)
T PRK07533 84 EEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEK 154 (258)
T ss_pred HHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEecccccc
Confidence 46899999999975311 122234566789999999999997632 236899999987643
|
|
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.76 E-value=5.9e-18 Score=141.40 Aligned_cols=131 Identities=19% Similarity=0.173 Sum_probs=103.0
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC-----CCCEEEEEecCCChhccchhh----
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-----EETLQVCKGDTRNPKDLDPAI---- 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~v~~Di~d~~~v~~~~---- 148 (214)
..+.+|+++||||++|||+++|++|++.|++|++++|+++++++....+. +.++..+.+|+++++++++..
T Consensus 4 ~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~ 83 (270)
T KOG0725|consen 4 GRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAV 83 (270)
T ss_pred ccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHH
Confidence 55789999999999999999999999999999999999998777654432 345788999999988877633
Q ss_pred ---hCCCcEEEeccCCCCCCC----CCCCCCCchhHHHHHH-HHHHHHHh----c-cCCCeEEEEcccccccc
Q 028043 149 ---FEGVTHVICCTGTTAFPS----RRWDGDNTPEKVDWEG-VRNLVSAL----P-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 ---~~~~d~li~~Ag~~~~~~----~~~~~~~~~~~vNv~g-~~~l~~a~----~-~~~~~iV~vSS~~~~~~ 208 (214)
++++|++|||||...... ...+.+++.+++|+.| .+++.+++ + .+.+.|+++||.++...
T Consensus 84 ~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~ 156 (270)
T KOG0725|consen 84 EKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGP 156 (270)
T ss_pred HHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccC
Confidence 578999999999987432 2334456778999996 56566555 2 25678999999887654
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=6.2e-18 Score=139.01 Aligned_cols=124 Identities=17% Similarity=0.246 Sum_probs=97.4
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCCcEEE
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVTHVI 156 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~d~li 156 (214)
|+++||||+||||++++++|+++|++|++++|++++++++...+ +.++.++.+|++|.+++++.+ ++++|+||
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi 79 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL-GDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLV 79 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-ccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 57999999999999999999999999999999998877665443 346788999999999887633 35799999
Q ss_pred eccCCCCC--C--CCCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEccccccc
Q 028043 157 CCTGTTAF--P--SRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTK 207 (214)
Q Consensus 157 ~~Ag~~~~--~--~~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~ 207 (214)
||||.... + ...+++..+.+++|+.|+..+++++ +.+.++||++||.++..
T Consensus 80 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~ 139 (248)
T PRK10538 80 NNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSW 139 (248)
T ss_pred ECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCC
Confidence 99997531 1 1223344667899999988877765 23567999999987653
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=6.6e-18 Score=138.25 Aligned_cols=126 Identities=20% Similarity=0.250 Sum_probs=98.2
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCCc
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVT 153 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~d 153 (214)
+++|+++||||+|+||++++++|+++|++|++++|+++.+++..+++ +.++.++++|++|.+++.+.. ++++|
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 82 (249)
T PRK06500 4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL-GESALVIRADAGDVAAQKALAQALAEAFGRLD 82 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh-CCceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence 46789999999999999999999999999999999987776655444 345778999999988776522 45799
Q ss_pred EEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEcccccc
Q 028043 154 HVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVT 206 (214)
Q Consensus 154 ~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~ 206 (214)
++|||||...... ...++..+.+++|+.|+.++++++.+ ..+++|++||.++.
T Consensus 83 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~ 141 (249)
T PRK06500 83 AVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAH 141 (249)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhc
Confidence 9999999765322 12234456789999999999998842 34678888886653
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=6.8e-18 Score=139.59 Aligned_cols=127 Identities=14% Similarity=0.219 Sum_probs=95.1
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCC-CeEEEEEcChhH-HHHHhcccC---CCCEEEEEecCCChhccchhh-----hC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEK-ATTLFGKQD---EETLQVCKGDTRNPKDLDPAI-----FE 150 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G-~~V~~~~r~~~~-~~~~~~~~~---~~~~~~v~~Di~d~~~v~~~~-----~~ 150 (214)
++|+|+||||+||||++++++|+++| ++|++++|+++. ++++.+++. ..+++++.+|++|++++++.+ .+
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g 86 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGG 86 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcC
Confidence 46899999999999999999999995 899999998875 555443332 236889999999999876532 25
Q ss_pred CCcEEEeccCCCCCCCCCCCCC---CchhHHHHHHHHHHHHHh----c-cCCCeEEEEccccccc
Q 028043 151 GVTHVICCTGTTAFPSRRWDGD---NTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~~~~~~~---~~~~~vNv~g~~~l~~a~----~-~~~~~iV~vSS~~~~~ 207 (214)
++|++|||+|........+.+. .+.+++|+.|+..+++++ + .+.++||++||.++..
T Consensus 87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~ 151 (253)
T PRK07904 87 DVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGER 151 (253)
T ss_pred CCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcC
Confidence 7999999999864322222222 235799999998866543 3 4568999999987644
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.76 E-value=6.8e-18 Score=139.21 Aligned_cols=130 Identities=10% Similarity=0.139 Sum_probs=100.8
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
+.+.+|+++||||+||||++++++|+++|++|++++|+.+..+++..++. +.++.++.+|++|.+++++++ +
T Consensus 7 ~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 86 (255)
T PRK06113 7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKL 86 (255)
T ss_pred cCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 44678999999999999999999999999999999998877665543332 345778899999999887643 3
Q ss_pred CCCcEEEeccCCCCCCC--CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEccccccc
Q 028043 150 EGVTHVICCTGTTAFPS--RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~--~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~ 207 (214)
+++|++|||||...... ..+++..+.+++|+.|+.++++++. .+.++||++||.++..
T Consensus 87 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~ 151 (255)
T PRK06113 87 GKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN 151 (255)
T ss_pred CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccC
Confidence 57999999999754221 1223344557899999999999773 2346999999987754
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=8.1e-18 Score=139.06 Aligned_cols=129 Identities=16% Similarity=0.118 Sum_probs=100.8
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC---CCCEEEEEecCCChhccchhh--hCCCc
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAI--FEGVT 153 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~v~~Di~d~~~v~~~~--~~~~d 153 (214)
.+++|+++||||+||||++++++|+++|++|++++|++++.++..+++. +.++.++.+|++|++++++++ ++++|
T Consensus 4 ~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id 83 (259)
T PRK06125 4 HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDID 83 (259)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCC
Confidence 4578999999999999999999999999999999999887766544332 345788999999999987643 46899
Q ss_pred EEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh----c-cCCCeEEEEccccccc
Q 028043 154 HVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 154 ~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~----~-~~~~~iV~vSS~~~~~ 207 (214)
++|||||...... ...++....+++|+.++.++++++ + .+.++||++||..+..
T Consensus 84 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~ 145 (259)
T PRK06125 84 ILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGEN 145 (259)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccC
Confidence 9999999754211 222344666799999999998876 2 2346899999987653
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.76 E-value=6e-18 Score=154.00 Aligned_cols=132 Identities=15% Similarity=0.067 Sum_probs=103.8
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
..+.+++++||||+||||++++++|+++|++|++++|+.++++++.+.+. +.++.++.+|++|++++++.+ +
T Consensus 311 ~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 390 (582)
T PRK05855 311 GPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEH 390 (582)
T ss_pred ccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 34567899999999999999999999999999999999888776654432 346788999999999887643 3
Q ss_pred CCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cC-CCeEEEEccccccccC
Q 028043 150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SS-LKRIVLVSSVGVTKFN 209 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~-~~~iV~vSS~~~~~~~ 209 (214)
+++|+||||||...... ...++....+++|+.|+.++++++. ++ .++||++||.+++.+.
T Consensus 391 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~ 459 (582)
T PRK05855 391 GVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPS 459 (582)
T ss_pred CCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCC
Confidence 57999999999865322 2223445667899999999998752 22 3689999999887643
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.6e-18 Score=133.75 Aligned_cols=127 Identities=24% Similarity=0.245 Sum_probs=100.3
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcC--hhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRD--PEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~--~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
|+++||||++|||++++++|+++|. +|+++.|+ .+..+++.+++. +.++.++++|+++++++++.+ +++
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 6899999999999999999999955 68888998 555665544332 567889999999999988743 468
Q ss_pred CcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhcc-CCCeEEEEccccccccC
Q 028043 152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~-~~~~iV~vSS~~~~~~~ 209 (214)
+|++|||||...... ...+.....+++|+.++..+.+++.+ +.++||++||.++..+.
T Consensus 81 ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~ 142 (167)
T PF00106_consen 81 LDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGVRGS 142 (167)
T ss_dssp ESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGTSSS
T ss_pred ccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhccCC
Confidence 999999999876322 11233456789999999999998854 67899999999886543
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=6.7e-18 Score=140.99 Aligned_cols=126 Identities=17% Similarity=0.238 Sum_probs=97.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC----CCCEEEEEecCCChhccchhh------hC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
++|+++||||+|+||+++++.|+++|++|++++|+++..+++.+... +.+++++.+|++|++++++ + ++
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~ 80 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIG 80 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcC
Confidence 56899999999999999999999999999999999877665543221 2468889999999988764 2 46
Q ss_pred CCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh----c-cCCCeEEEEccccccc
Q 028043 151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~----~-~~~~~iV~vSS~~~~~ 207 (214)
++|++|||||...... ..++...+.+++|+.|+.++++++ + .+.++||++||.++..
T Consensus 81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~ 145 (280)
T PRK06914 81 RIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRV 145 (280)
T ss_pred CeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccC
Confidence 7999999999765221 112233456789999999998875 2 3567999999976543
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=1e-17 Score=138.42 Aligned_cols=131 Identities=11% Similarity=0.133 Sum_probs=97.6
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcC-hhHHHHHhcccC--CCCEEEEEecCCChhccchhh------
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD-PEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~-~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
++.++|+++||||+||||++++++|+++|++|++++++ .+..+.+.+.+. +.++.++.+|++|.+++++++
T Consensus 5 ~~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~ 84 (258)
T PRK09134 5 SMAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAA 84 (258)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 34567899999999999999999999999999887764 444444433321 346788999999999887643
Q ss_pred hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccccc
Q 028043 149 FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||...... ..++...+.+++|+.|+.++++++. ...+++|+++|...+.+
T Consensus 85 ~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~ 152 (258)
T PRK09134 85 LGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNL 152 (258)
T ss_pred cCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCC
Confidence 357999999999764211 2233446678999999999999762 23468999998766544
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=6e-18 Score=139.55 Aligned_cols=130 Identities=14% Similarity=0.113 Sum_probs=98.9
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
.++++|+++||||+||||++++++|+++|++|++++|+++.. +..+.+. +.++.++.+|++|++++++.+ +
T Consensus 3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (258)
T PRK08628 3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKF 81 (258)
T ss_pred CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence 356789999999999999999999999999999999988765 3322221 346888999999999887643 3
Q ss_pred CCCcEEEeccCCCCCCCC--CCCCCCchhHHHHHHHHHHHHHh----ccCCCeEEEEcccccccc
Q 028043 150 EGVTHVICCTGTTAFPSR--RWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~~--~~~~~~~~~~vNv~g~~~l~~a~----~~~~~~iV~vSS~~~~~~ 208 (214)
+++|+||||||....... ..++....+++|+.++.++++++ +...++||++||..+..+
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~ 146 (258)
T PRK08628 82 GRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTG 146 (258)
T ss_pred CCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccC
Confidence 579999999997542111 11334556789999999988876 234478999999877643
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=7.5e-18 Score=140.84 Aligned_cols=126 Identities=10% Similarity=0.104 Sum_probs=95.6
Q ss_pred CCCCEEEEEcCc--hHHHHHHHHHHHHCCCeEEEEEcCh---hHHHHHhcccCCCCEEEEEecCCChhccchhh------
Q 028043 80 SSSKLVLVAGGS--GGVGQLVVASLLSRNIKSRLLLRDP---EKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 80 ~~~k~vlITGas--ggIG~~la~~L~~~G~~V~~~~r~~---~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
+++|+++||||+ +|||++++++|+++|++|++++|++ ++++++.+++. ....+++|++|++++++++
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~~~ 85 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELG--AFVAGHCDVTDEASIDAVFETLEKK 85 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcC--CceEEecCCCCHHHHHHHHHHHHHh
Confidence 467999999997 8999999999999999999988874 33444443332 2456899999999988743
Q ss_pred hCCCcEEEeccCCCCC-----C--CCCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEccccccc
Q 028043 149 FEGVTHVICCTGTTAF-----P--SRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTK 207 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~-----~--~~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~ 207 (214)
++++|+||||||+... + ..+.++....+++|+.|+.++++++.+ ..++||++||.++..
T Consensus 86 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~ 154 (272)
T PRK08159 86 WGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEK 154 (272)
T ss_pred cCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEecccccc
Confidence 4689999999997641 1 122334566789999999999997632 337899999987643
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=5.5e-18 Score=141.03 Aligned_cols=126 Identities=10% Similarity=0.125 Sum_probs=93.2
Q ss_pred CCCCEEEEEcCch--HHHHHHHHHHHHCCCeEEEEEcCh---hHHHHHhcccCCCCEEEEEecCCChhccchhh------
Q 028043 80 SSSKLVLVAGGSG--GVGQLVVASLLSRNIKSRLLLRDP---EKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 80 ~~~k~vlITGasg--gIG~~la~~L~~~G~~V~~~~r~~---~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
+++|+++||||++ |||++++++|+++|++|++.+|+. +..+++.... .....+.+|++|++++++.+
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~ 81 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQL--GSDIVLPCDVAEDASIDAMFAELGKV 81 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhcc--CCceEeecCCCCHHHHHHHHHHHHhh
Confidence 5689999999985 999999999999999999999873 2233332222 24567889999999998743
Q ss_pred hCCCcEEEeccCCCCCCC--------CCCCCCCchhHHHHHHHHHHHHHhc---cCCCeEEEEccccccc
Q 028043 149 FEGVTHVICCTGTTAFPS--------RRWDGDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~~--------~~~~~~~~~~~vNv~g~~~l~~a~~---~~~~~iV~vSS~~~~~ 207 (214)
++++|++|||||+..... ..++.....+++|+.|+..+++++. ...++||++||.++..
T Consensus 82 ~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~ 151 (262)
T PRK07984 82 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER 151 (262)
T ss_pred cCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCC
Confidence 567999999999753211 1122334567889999999888763 2236899999987643
|
|
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.75 E-value=5.1e-18 Score=132.33 Aligned_cols=127 Identities=20% Similarity=0.214 Sum_probs=103.2
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCC-CCEEEEEecCCChhccchhh------hCCC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDE-ETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
++.|.++||||++|||+++++.|++.|++|.+.+++.+..++....+++ .+-..+.||++++++++..+ ++.+
T Consensus 12 ~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~p 91 (256)
T KOG1200|consen 12 LMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTP 91 (256)
T ss_pred HhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCC
Confidence 4568999999999999999999999999999999999888888777764 34557899999999887622 5689
Q ss_pred cEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-cc------CCCeEEEEcccccc
Q 028043 153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-PS------SLKRIVLVSSVGVT 206 (214)
Q Consensus 153 d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-~~------~~~~iV~vSS~~~~ 206 (214)
++||||||+..... +..+++++.+.+|+.|++++.+++ +. +..+||++||+-+-
T Consensus 92 svlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGk 155 (256)
T KOG1200|consen 92 SVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGK 155 (256)
T ss_pred cEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcc
Confidence 99999999986321 344566778899999999999876 21 23489999998553
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=8.3e-18 Score=138.35 Aligned_cols=129 Identities=14% Similarity=0.068 Sum_probs=95.1
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEE-cChhHHHHHhcccC--CCCEEEEEecCCChhccchhh--------
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLL-RDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI-------- 148 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~-r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~-------- 148 (214)
+++|+++||||+||||++++++|++.|++|++.+ |+.+..++...++. +..+..+.+|++|.++++...
T Consensus 2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (252)
T PRK12747 2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ 81 (252)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence 3579999999999999999999999999999875 55555554433322 335677889999988776422
Q ss_pred --hC--CCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEcccccccc
Q 028043 149 --FE--GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 --~~--~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~~ 208 (214)
++ ++|+||||||...... ...+..+..+++|+.|++.+++++.+ ..++||++||.+++.+
T Consensus 82 ~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~ 151 (252)
T PRK12747 82 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRIS 151 (252)
T ss_pred hhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccC
Confidence 12 7999999999754211 12223456678999999999987732 2369999999988654
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=6.1e-18 Score=140.45 Aligned_cols=126 Identities=12% Similarity=0.179 Sum_probs=92.1
Q ss_pred CCCCEEEEEcC--chHHHHHHHHHHHHCCCeEEEEEcChh---HHHHHhcccCCCCEEEEEecCCChhccchhh------
Q 028043 80 SSSKLVLVAGG--SGGVGQLVVASLLSRNIKSRLLLRDPE---KATTLFGKQDEETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 80 ~~~k~vlITGa--sggIG~~la~~L~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
+++|+++|||| ++|||+++|++|+++|++|++.+|+.. .++++.... .....+++|++|++++++++
T Consensus 4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 81 (261)
T PRK08690 4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAEL--DSELVFRCDVASDDEINQVFADLGKH 81 (261)
T ss_pred cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhcc--CCceEEECCCCCHHHHHHHHHHHHHH
Confidence 56899999997 679999999999999999999877642 233332222 23457899999999988743
Q ss_pred hCCCcEEEeccCCCCCC----C----CCCCCCCchhHHHHHHHHHHHHHhc----cCCCeEEEEccccccc
Q 028043 149 FEGVTHVICCTGTTAFP----S----RRWDGDNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~----~----~~~~~~~~~~~vNv~g~~~l~~a~~----~~~~~iV~vSS~~~~~ 207 (214)
++++|++|||||..... . ..++..+..+++|+.++.++++++. ...++||++||.++..
T Consensus 82 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~ 152 (261)
T PRK08690 82 WDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVR 152 (261)
T ss_pred hCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEccccccc
Confidence 56899999999986421 0 1112234456889999998888652 2336899999988754
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=7.8e-18 Score=137.81 Aligned_cols=126 Identities=17% Similarity=0.129 Sum_probs=97.2
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhccc---CCCCEEEEEecCCChhccchhh---hCCCcEE
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ---DEETLQVCKGDTRNPKDLDPAI---FEGVTHV 155 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~v~~Di~d~~~v~~~~---~~~~d~l 155 (214)
||+++||||+||||++++++|+++|++|++++|++++.++..+.+ ...+++++++|++|++++++.+ ...+|++
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~v 80 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIV 80 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEE
Confidence 478999999999999999999999999999999988766544332 1346889999999999887643 2357999
Q ss_pred EeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEccccccc
Q 028043 156 ICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 156 i~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~ 207 (214)
|||||...... .++++..+.+++|+.|+.++++++. .+.+++|++||..+..
T Consensus 81 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~ 140 (243)
T PRK07102 81 LIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDR 140 (243)
T ss_pred EECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccC
Confidence 99999754221 1222334567899999999998762 3567899999986643
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.75 E-value=9.5e-18 Score=137.23 Aligned_cols=127 Identities=19% Similarity=0.203 Sum_probs=99.1
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
+++|+++||||+|+||++++++|+++|++|++++|+.++..+..+.+. ..++.++.+|++|++++++.+ +++
T Consensus 4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (251)
T PRK12826 4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGR 83 (251)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 467899999999999999999999999999999999776655433332 345888999999999888743 247
Q ss_pred CcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccc
Q 028043 152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVT 206 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~ 206 (214)
+|+|||+||...... ...++..+.+++|+.++.++++++ +.+.++||++||..++
T Consensus 84 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~ 146 (251)
T PRK12826 84 LDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGP 146 (251)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhh
Confidence 999999999865311 112233556789999999999876 2356789999998876
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.2e-17 Score=139.53 Aligned_cols=129 Identities=19% Similarity=0.234 Sum_probs=98.9
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
..+|+++||||+|+||++++++|+++|++|++++|+.+..++..+.+. +.++.++.+|++|++++++++ +++
T Consensus 8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 87 (274)
T PRK07775 8 PDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGE 87 (274)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 456899999999999999999999999999999998877665443322 345778899999999987633 357
Q ss_pred CcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
+|++|||||...... ..++...+.+++|+.|+.++++++ +.+.++||++||..++.+
T Consensus 88 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~ 152 (274)
T PRK07775 88 IEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQ 152 (274)
T ss_pred CCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCC
Confidence 999999999764211 112233455689999999998875 234568999999887654
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.1e-17 Score=137.94 Aligned_cols=129 Identities=12% Similarity=0.045 Sum_probs=97.1
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhH--HHHHhcccCCCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK--ATTLFGKQDEETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
+.+.+|+++||||+||||++++++|++.|++|++++++... .+++. .. +..+..+++|++|.+++++++ +
T Consensus 6 ~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~-~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 83 (253)
T PRK08993 6 FSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVT-AL-GRRFLSLTADLRKIDGIPALLERAVAEF 83 (253)
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHH-hc-CCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 45678999999999999999999999999999988775421 22222 11 345778999999999888643 4
Q ss_pred CCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cC-CCeEEEEcccccccc
Q 028043 150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SS-LKRIVLVSSVGVTKF 208 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~-~~~iV~vSS~~~~~~ 208 (214)
+++|++|||||...... ...++..+.+++|+.|+.++++++. ++ .++||++||..++.+
T Consensus 84 ~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~ 151 (253)
T PRK08993 84 GHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQG 151 (253)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccC
Confidence 57999999999864211 2233456778999999999988762 22 368999999987654
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=9.1e-18 Score=137.45 Aligned_cols=124 Identities=15% Similarity=0.129 Sum_probs=96.7
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhh---CCCcEEEec
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF---EGVTHVICC 158 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~---~~~d~li~~ 158 (214)
+++++||||+||||++++++|+++|++|++++|++++++++.+. ..++.++.+|++|.+++++++- ..+|.+|||
T Consensus 1 ~~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ 78 (240)
T PRK06101 1 MTAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ--SANIFTLAFDVTDHPGTKAALSQLPFIPELWIFN 78 (240)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh--cCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEc
Confidence 37899999999999999999999999999999999887776543 2357789999999999887431 247999999
Q ss_pred cCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEccccccc
Q 028043 159 TGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTK 207 (214)
Q Consensus 159 Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~ 207 (214)
||...... ..++...+.+++|+.|+.++++++.+ ..+++|++||.++..
T Consensus 79 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~ 133 (240)
T PRK06101 79 AGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASEL 133 (240)
T ss_pred CcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhcc
Confidence 99653211 12223356789999999999998743 346799999976543
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=7.6e-18 Score=140.15 Aligned_cols=126 Identities=14% Similarity=0.128 Sum_probs=97.6
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCCCcE
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGVTH 154 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~~d~ 154 (214)
|+++||||+||||++++++|+++|++|++++|+.++.+++.+.+. +.++.++.+|++|++++++.+ ++++|+
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~ 80 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV 80 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 579999999999999999999999999999999887766544332 346788999999999887633 357999
Q ss_pred EEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh----c-cCCCeEEEEcccccccc
Q 028043 155 VICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 155 li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~----~-~~~~~iV~vSS~~~~~~ 208 (214)
||||||...... ...++.+..+++|+.++.++++++ + .+.++||++||.+++.+
T Consensus 81 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~ 142 (270)
T PRK05650 81 IVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQ 142 (270)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCC
Confidence 999999865321 122233456789999999888765 2 35679999999877653
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.75 E-value=7.4e-18 Score=152.45 Aligned_cols=129 Identities=18% Similarity=0.233 Sum_probs=103.1
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
...+|+++||||+||||++++++|+++|++|++++|++++++++.++. +..+..+.+|++|++++++.+ ++++
T Consensus 266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 344 (520)
T PRK06484 266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL-GDEHLSVQADITDEAAVESAFAQIQARWGRL 344 (520)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCceeEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 447899999999999999999999999999999999998887766544 345677899999999887643 4679
Q ss_pred cEEEeccCCCCC--C--CCCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEcccccccc
Q 028043 153 THVICCTGTTAF--P--SRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 153 d~li~~Ag~~~~--~--~~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~~ 208 (214)
|+||||||.... + ....++.++.+++|+.|+.++++++.+ ..++||++||.++..+
T Consensus 345 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 407 (520)
T PRK06484 345 DVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLA 407 (520)
T ss_pred CEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCC
Confidence 999999997631 1 122234466789999999999997732 3469999999987654
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=7.3e-18 Score=139.14 Aligned_cols=125 Identities=14% Similarity=0.160 Sum_probs=96.1
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC----CCCEEEEEecCCChhccchhh------hCC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
+|+++||||+|+||++++++|+++|++|++++|+.+..++..+.+. ...+.++.+|++|.+++++++ +++
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 81 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR 81 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 6899999999999999999999999999999999877665543321 245888999999999887643 468
Q ss_pred CcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cC-CCeEEEEcccccc
Q 028043 152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SS-LKRIVLVSSVGVT 206 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~-~~~iV~vSS~~~~ 206 (214)
+|++|||||...... ..+++..+.+++|+.|+.++++++. ++ .++||++||.++.
T Consensus 82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~ 145 (259)
T PRK12384 82 VDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGK 145 (259)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccc
Confidence 999999999765321 1222335567899999998888662 23 4699999997653
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=9e-18 Score=136.62 Aligned_cols=128 Identities=21% Similarity=0.281 Sum_probs=99.7
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCC-CCEEEEEecCCChhccchhh------hCCC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDE-ETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
+++++++||||+|+||++++++|+++|++|++++|++++.+++.+.+.. .+++++++|++|.+++++.+ ++++
T Consensus 4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 83 (237)
T PRK07326 4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGL 83 (237)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4578999999999999999999999999999999998877665444321 46888999999999887633 3579
Q ss_pred cEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc----cCCCeEEEEccccccc
Q 028043 153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 153 d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~----~~~~~iV~vSS~~~~~ 207 (214)
|+|||+||...... ...+...+.+++|+.++.++++++. .+.++||++||.++..
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~ 145 (237)
T PRK07326 84 DVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTN 145 (237)
T ss_pred CEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhcc
Confidence 99999999764321 1222334567899999999988762 3557899999987654
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.2e-17 Score=135.96 Aligned_cols=128 Identities=23% Similarity=0.223 Sum_probs=98.6
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
++++|+++||||+|+||++++++|+++|++|++++|++++.+.....+. +.++.++.+|++|++++.+++ ++
T Consensus 2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (246)
T PRK05653 2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFG 81 (246)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 4567899999999999999999999999999999999887665444332 346788999999999887633 35
Q ss_pred CCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccc
Q 028043 151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVT 206 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~ 206 (214)
++|++||+||...... ...+.....+++|+.++.++++++ +.+.++||++||..+.
T Consensus 82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~ 145 (246)
T PRK05653 82 ALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGV 145 (246)
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhc
Confidence 6899999999865321 111223455788999999998877 2356799999998654
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=5.8e-18 Score=140.35 Aligned_cols=123 Identities=18% Similarity=0.194 Sum_probs=96.0
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
+.+++|+++||||+||||++++++|+++|++|++++|+++..+ ..++.++.+|++|++++++++ +++
T Consensus 5 ~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 77 (266)
T PRK06171 5 LNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ-------HENYQFVPTDVSSAEEVNHTVAEIIEKFGR 77 (266)
T ss_pred ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc-------cCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 3567899999999999999999999999999999999876532 235778999999999887633 467
Q ss_pred CcEEEeccCCCCCCC------------CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEccccccc
Q 028043 152 VTHVICCTGTTAFPS------------RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~------------~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~ 207 (214)
+|+||||||...... ...++.+..+++|+.|+.++++++. .+.++||++||..++.
T Consensus 78 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~ 150 (266)
T PRK06171 78 IDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLE 150 (266)
T ss_pred CCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccC
Confidence 999999999753210 1112234567899999999998773 2346899999988754
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=9.4e-18 Score=139.23 Aligned_cols=127 Identities=11% Similarity=0.086 Sum_probs=94.1
Q ss_pred CCCCCEEEEEcCch--HHHHHHHHHHHHCCCeEEEEEcChh---HHHHHhcccCCCCEEEEEecCCChhccchhh-----
Q 028043 79 ASSSKLVLVAGGSG--GVGQLVVASLLSRNIKSRLLLRDPE---KATTLFGKQDEETLQVCKGDTRNPKDLDPAI----- 148 (214)
Q Consensus 79 ~~~~k~vlITGasg--gIG~~la~~L~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~----- 148 (214)
.+++|+++||||++ |||++++++|+++|++|++.+|++. ..+++.++. + ....+++|++|++++++++
T Consensus 5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~-g-~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (260)
T PRK06603 5 LLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEI-G-CNFVSELDVTNPKSISNLFDDIKE 82 (260)
T ss_pred ccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhc-C-CceEEEccCCCHHHHHHHHHHHHH
Confidence 45789999999997 9999999999999999999998742 223332222 1 2245789999999988743
Q ss_pred -hCCCcEEEeccCCCCC-----C--CCCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEccccccc
Q 028043 149 -FEGVTHVICCTGTTAF-----P--SRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTK 207 (214)
Q Consensus 149 -~~~~d~li~~Ag~~~~-----~--~~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~ 207 (214)
++++|+||||||.... + ..+.+++.+.+++|+.+++.+++++.+ ..++||++||.++..
T Consensus 83 ~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~ 152 (260)
T PRK06603 83 KWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEK 152 (260)
T ss_pred HcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCcccc
Confidence 5689999999997531 1 122334566789999999999987632 236999999987653
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.1e-17 Score=139.49 Aligned_cols=130 Identities=17% Similarity=0.257 Sum_probs=99.3
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC----CCCEEEEEecCCChhccchhh------
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
.+++|+++||||+|+||++++++|+++|++|++++|++++.++..+.+. ..++.++.+|++|++++++.+
T Consensus 4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 83 (276)
T PRK05875 4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAW 83 (276)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3567999999999999999999999999999999999877655443322 246788899999999887633
Q ss_pred hCCCcEEEeccCCCCCC----CCCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccccc
Q 028043 149 FEGVTHVICCTGTTAFP----SRRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~----~~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~ 208 (214)
++++|++|||||..... ...+++....+++|+.++.++++++. .+.++||++||.+++..
T Consensus 84 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~ 152 (276)
T PRK05875 84 HGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNT 152 (276)
T ss_pred cCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCC
Confidence 34799999999965311 12222345567889999999988662 23468999999887653
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.4e-17 Score=137.23 Aligned_cols=125 Identities=18% Similarity=0.188 Sum_probs=97.4
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCCcEE
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVTHV 155 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~d~l 155 (214)
+|+++||||+|+||++++++|+++|++|++++|++++.+++.+.+.+.+++++++|++|.+++.+++ ++++|++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL 81 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5799999999999999999999999999999999888776655444456888999999999887643 2469999
Q ss_pred EeccCCCCCCCC---CCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccc
Q 028043 156 ICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVT 206 (214)
Q Consensus 156 i~~Ag~~~~~~~---~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~ 206 (214)
|||||....... ..+.....+.+|+.++.++++++ +.+.++||++||..+.
T Consensus 82 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~ 140 (257)
T PRK07074 82 VANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGM 140 (257)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhc
Confidence 999998643221 11122344578999999998876 2345789999997654
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=9e-18 Score=140.21 Aligned_cols=130 Identities=15% Similarity=0.160 Sum_probs=97.1
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhH-------HHHHhcccC--CCCEEEEEecCCChhccchhh
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-------ATTLFGKQD--EETLQVCKGDTRNPKDLDPAI 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~-------~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~ 148 (214)
+.+++|+++||||+||||++++++|+++|++|++++|+.+. +++..+++. +.++.++.+|++|++++++.+
T Consensus 2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~ 81 (273)
T PRK08278 2 MSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAV 81 (273)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHH
Confidence 34578999999999999999999999999999999997642 222222221 346788999999999887643
Q ss_pred ------hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEccccccc
Q 028043 149 ------FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 149 ------~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~ 207 (214)
++++|+||||||...... ...++..+.+++|+.|+.++++++. .+.++||++||..+..
T Consensus 82 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~ 154 (273)
T PRK08278 82 AKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLD 154 (273)
T ss_pred HHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhcc
Confidence 358999999999864322 1222345567899999999999873 2346899999976543
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.3e-17 Score=136.84 Aligned_cols=128 Identities=16% Similarity=0.233 Sum_probs=95.6
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEc-ChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-DPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
++++|+++||||+||||+++++.|+++|++|+++++ +++..+.+.... ..++.++++|++|++++++++ +++
T Consensus 2 ~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 80 (253)
T PRK08642 2 QISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL-GDRAIALQADVTDREQVQAMFATATEHFGK 80 (253)
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh-CCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 456789999999999999999999999999988765 455555544433 246788999999999887643 344
Q ss_pred -CcEEEeccCCCCC---------CCCCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEccccccc
Q 028043 152 -VTHVICCTGTTAF---------PSRRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 152 -~d~li~~Ag~~~~---------~~~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~ 207 (214)
+|++|||||.... ....+++..+.+++|+.++.++++++. .+.++||++||.....
T Consensus 81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~ 151 (253)
T PRK08642 81 PITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQN 151 (253)
T ss_pred CCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccC
Confidence 9999999986421 111223345568999999999999772 3457999999976543
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.75 E-value=8.5e-18 Score=144.68 Aligned_cols=130 Identities=21% Similarity=0.188 Sum_probs=98.6
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhH----HHHHhccc--CCCCEEEEEecCCChhccchhhh-C
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK----ATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIF-E 150 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~----~~~~~~~~--~~~~~~~v~~Di~d~~~v~~~~~-~ 150 (214)
+++++|+|+||||+|+||++++++|+++|++|++++|.... .+.+.... ...++.++.+|++|++++++++- .
T Consensus 1 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~ 80 (352)
T PLN02240 1 MSLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST 80 (352)
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC
Confidence 34678999999999999999999999999999999875321 12222111 12457889999999999886432 2
Q ss_pred CCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEcccccccc
Q 028043 151 GVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~ 208 (214)
++|+|||+||.... .....+....+++|+.++.+++++++ .+.+++|++||.++|+.
T Consensus 81 ~~d~vih~a~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~ 138 (352)
T PLN02240 81 RFDAVIHFAGLKAV-GESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQ 138 (352)
T ss_pred CCCEEEEccccCCc-cccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCC
Confidence 69999999997542 22223445678999999999999885 46789999999888763
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.2e-17 Score=137.40 Aligned_cols=129 Identities=14% Similarity=0.119 Sum_probs=97.1
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEE-EcChhHHHHHhcccC--CCCEEEEEecCCChhccchhhh-------
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLL-LRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAIF------- 149 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~-~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~~------- 149 (214)
+++|+++||||+||||++++++|+++|++|+++ .|+.++.++..+.+. +..++++.+|++|++++.+++-
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~ 83 (254)
T PRK12746 4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQ 83 (254)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhc
Confidence 567899999999999999999999999999875 677766655443332 3457889999999999876431
Q ss_pred -----CCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEcccccccc
Q 028043 150 -----EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 150 -----~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~~ 208 (214)
+++|++|||||...... ..++.....+++|+.|+.++++++.+ ..+++|++||..++.+
T Consensus 84 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~ 153 (254)
T PRK12746 84 IRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLG 153 (254)
T ss_pred cccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCC
Confidence 36999999999764211 11222345567999999999998732 3468999999887653
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.3e-17 Score=136.04 Aligned_cols=129 Identities=20% Similarity=0.211 Sum_probs=99.1
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEE-EcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLL-LRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~-~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
.+++|+++||||+|+||++++++|+++|++|+++ +|++++.+++.+.+. +.++.++.+|++|++++++.+ +
T Consensus 2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (247)
T PRK05565 2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKF 81 (247)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 3567899999999999999999999999999998 998877655443322 345788999999999887633 3
Q ss_pred CCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEccccccc
Q 028043 150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~ 207 (214)
+++|+|||+||...... ...+..+..+++|+.++.++++++. .+.+++|++||...+.
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~ 147 (247)
T PRK05565 82 GKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLI 147 (247)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhcc
Confidence 47999999999874211 1122335567899999999888762 3457899999987654
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.3e-17 Score=138.08 Aligned_cols=124 Identities=18% Similarity=0.145 Sum_probs=95.1
Q ss_pred CCCCEEEEEcC--chHHHHHHHHHHHHCCCeEEEEEcCh--hHHHHHhcccCCCCEEEEEecCCChhccchhh------h
Q 028043 80 SSSKLVLVAGG--SGGVGQLVVASLLSRNIKSRLLLRDP--EKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 80 ~~~k~vlITGa--sggIG~~la~~L~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
+++|+++|||| ++|||++++++|+++|++|++++|+. +..+++.+++. ..+.++++|++|++++++.+ +
T Consensus 5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~i~~~~~~~~~~~ 83 (256)
T PRK07889 5 LEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLP-EPAPVLELDVTNEEHLASLADRVREHV 83 (256)
T ss_pred ccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcC-CCCcEEeCCCCCHHHHHHHHHHHHHHc
Confidence 56899999999 89999999999999999999998764 44455544443 35678999999999988643 4
Q ss_pred CCCcEEEeccCCCCC-------CCCCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEcccc
Q 028043 150 EGVTHVICCTGTTAF-------PSRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVG 204 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~-------~~~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~ 204 (214)
+++|++|||||.... ...++++..+.+++|+.|++++++++.+ ..++||++|+.+
T Consensus 84 g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~ 148 (256)
T PRK07889 84 DGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDA 148 (256)
T ss_pred CCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeecc
Confidence 689999999998631 1123344456689999999999987632 236899998754
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=8.3e-18 Score=142.85 Aligned_cols=130 Identities=18% Similarity=0.123 Sum_probs=98.2
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh-hHHHHHhcccC--CCCEEEEEecCCChhccchhh-----h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP-EKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI-----F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~-~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~-----~ 149 (214)
.++++|+++||||+||||++++++|+++|++|++.+++. +..+++.+++. +.++.++.+|++|++++++.+ +
T Consensus 8 ~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~ 87 (306)
T PRK07792 8 TDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGL 87 (306)
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHh
Confidence 456789999999999999999999999999999998753 34444433332 346788999999998887632 4
Q ss_pred CCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc----c--------CCCeEEEEccccccc
Q 028043 150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP----S--------SLKRIVLVSSVGVTK 207 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~----~--------~~~~iV~vSS~~~~~ 207 (214)
+++|+||||||...... ...++....+++|+.|+.++++++. . ..++||++||.++..
T Consensus 88 g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~ 160 (306)
T PRK07792 88 GGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLV 160 (306)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCccccc
Confidence 68999999999865321 2223345677899999999998752 1 125899999987654
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.4e-17 Score=136.71 Aligned_cols=127 Identities=13% Similarity=0.115 Sum_probs=97.1
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCCCc
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGVT 153 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~~d 153 (214)
+|+++||||+|+||++++++|+++|++|++++|+++..+++.+.+. +.++.++.+|++|++++++++ ++++|
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 80 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD 80 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 4789999999999999999999999999999999877666544332 346888999999999776522 45799
Q ss_pred EEEeccCCCCCCCC---CCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 154 HVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 154 ~li~~Ag~~~~~~~---~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
+|||+||....... ..++..+.+++|+.|+..+++++ +.+.+++|++||.+++.+
T Consensus 81 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~ 143 (255)
T TIGR01963 81 ILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVA 143 (255)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCC
Confidence 99999998653211 11223455678999999888876 235679999999876543
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.5e-17 Score=139.26 Aligned_cols=123 Identities=24% Similarity=0.293 Sum_probs=94.4
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChh--HHHHHhcccC--CCCEEEEEecCCChhccchhhhCCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE--KATTLFGKQD--EETLQVCKGDTRNPKDLDPAIFEGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~--~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~~~~~d~li 156 (214)
.+|+|+||||+|+||++++++|+++|++|++++|+.+ ...+....+. ..+++++.+|++|.+++.++ +.++|.++
T Consensus 5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~-l~~~d~v~ 83 (297)
T PLN02583 5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDA-LKGCSGLF 83 (297)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHH-HcCCCEEE
Confidence 3579999999999999999999999999999999643 2222222221 24688899999999998864 67899999
Q ss_pred eccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc--CCCeEEEEccccccc
Q 028043 157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS--SLKRIVLVSSVGVTK 207 (214)
Q Consensus 157 ~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~--~~~~iV~vSS~~~~~ 207 (214)
|.++.... ......+.+++|+.|+.++++++.+ +.++||++||.++++
T Consensus 84 ~~~~~~~~---~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~ 133 (297)
T PLN02583 84 CCFDPPSD---YPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVI 133 (297)
T ss_pred EeCccCCc---ccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHhee
Confidence 98764321 1122356789999999999999853 468999999997753
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.74 E-value=7.8e-18 Score=139.56 Aligned_cols=126 Identities=12% Similarity=0.121 Sum_probs=94.0
Q ss_pred CCCCEEEEEcCc--hHHHHHHHHHHHHCCCeEEEEEcCh------hHHHHHhcccCCCCEEEEEecCCChhccchhh---
Q 028043 80 SSSKLVLVAGGS--GGVGQLVVASLLSRNIKSRLLLRDP------EKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--- 148 (214)
Q Consensus 80 ~~~k~vlITGas--ggIG~~la~~L~~~G~~V~~~~r~~------~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~--- 148 (214)
+++|+++||||+ +|||++++++|++.|++|++..|+. +..+++.+. ...+.++++|++|++++++++
T Consensus 4 l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~v~~~~~~~ 81 (258)
T PRK07370 4 LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEP--LNPSLFLPCDVQDDAQIEETFETI 81 (258)
T ss_pred cCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhc--cCcceEeecCcCCHHHHHHHHHHH
Confidence 568999999986 8999999999999999999886543 223333222 124667899999999988643
Q ss_pred ---hCCCcEEEeccCCCCC-----C--CCCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEccccccc
Q 028043 149 ---FEGVTHVICCTGTTAF-----P--SRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTK 207 (214)
Q Consensus 149 ---~~~~d~li~~Ag~~~~-----~--~~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~ 207 (214)
++++|+||||||.... + ..+.++.++.+++|+.|+..+++++.+ ..++||++||.++..
T Consensus 82 ~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~ 153 (258)
T PRK07370 82 KQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVR 153 (258)
T ss_pred HHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEecccccc
Confidence 4689999999997531 1 122334567789999999999997632 237899999987653
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.5e-17 Score=150.42 Aligned_cols=128 Identities=16% Similarity=0.159 Sum_probs=101.6
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCCc
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVT 153 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~d 153 (214)
.++|+++||||++|||++++++|+++|++|++++|+.++++++.+++ +.++.++.+|++|++++++++ ++++|
T Consensus 3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD 81 (520)
T PRK06484 3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL-GPDHHALAMDVSDEAQIREGFEQLHREFGRID 81 (520)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCceeEEEeccCCHHHHHHHHHHHHHHhCCCC
Confidence 36799999999999999999999999999999999998887766554 345678999999999887643 46899
Q ss_pred EEEeccCCCCC-----CCCCCCCCCchhHHHHHHHHHHHHHhc-----cCCC-eEEEEcccccccc
Q 028043 154 HVICCTGTTAF-----PSRRWDGDNTPEKVDWEGVRNLVSALP-----SSLK-RIVLVSSVGVTKF 208 (214)
Q Consensus 154 ~li~~Ag~~~~-----~~~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~-~iV~vSS~~~~~~ 208 (214)
+||||||.... .....++..+.+++|+.++..+++++. .+.+ +||++||.++..+
T Consensus 82 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~ 147 (520)
T PRK06484 82 VLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVA 147 (520)
T ss_pred EEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCC
Confidence 99999997421 112233456778999999999998762 2333 8999999887653
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.7e-17 Score=136.81 Aligned_cols=123 Identities=14% Similarity=0.149 Sum_probs=94.9
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCCc
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVT 153 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~d 153 (214)
+++|+++||||+||||++++++|+++|++|++++|++...++..+.+. ..++++|++|++++++.+ ++++|
T Consensus 5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~---~~~~~~D~~~~~~~~~~~~~~~~~~~~id 81 (255)
T PRK06057 5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG---GLFVPTDVTDEDAVNALFDTAAETYGSVD 81 (255)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC---CcEEEeeCCCHHHHHHHHHHHHHHcCCCC
Confidence 568999999999999999999999999999999999877666544332 257889999999887643 25799
Q ss_pred EEEeccCCCCCCC-----CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEccccc
Q 028043 154 HVICCTGTTAFPS-----RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGV 205 (214)
Q Consensus 154 ~li~~Ag~~~~~~-----~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~ 205 (214)
+||||||...... ...+.....+++|+.|+.++++++. .+.++||++||..+
T Consensus 82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~ 143 (255)
T PRK06057 82 IAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVA 143 (255)
T ss_pred EEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhh
Confidence 9999999754211 1112345667899999998888652 34578999999754
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.1e-17 Score=144.26 Aligned_cols=125 Identities=18% Similarity=0.198 Sum_probs=92.7
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEE-EEcChhH--HHHHhcccCCCCEEEEEecCCChhccchhhhC--CCcEEE
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRL-LLRDPEK--ATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVI 156 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~-~~r~~~~--~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~--~~d~li 156 (214)
+|+|+||||+|+||++++++|+++|+++++ ++|.... ...+.......++.++.+|++|.++++++ +. ++|+||
T Consensus 1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~~~D~Vi 79 (355)
T PRK10217 1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARV-FTEHQPDCVM 79 (355)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHH-HhhcCCCEEE
Confidence 378999999999999999999999998554 4543221 11111111123577889999999998874 44 599999
Q ss_pred eccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc----------CCCeEEEEcccccccc
Q 028043 157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS----------SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 157 ~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~----------~~~~iV~vSS~~~~~~ 208 (214)
|+||.... ...++.....+++|+.|+.++++++.+ +.+++|++||.++|+.
T Consensus 80 h~A~~~~~-~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~ 140 (355)
T PRK10217 80 HLAAESHV-DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGD 140 (355)
T ss_pred ECCcccCc-chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCC
Confidence 99997642 223345567889999999999998843 3569999999988873
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.6e-17 Score=134.04 Aligned_cols=126 Identities=25% Similarity=0.226 Sum_probs=98.6
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh--hCCCcE
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--FEGVTH 154 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~--~~~~d~ 154 (214)
+.+.+|+++||||+|+||++++++|+++|+ +|++++|+.++.++ .+.++.++.+|++|.+++++.. ++++|+
T Consensus 2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~id~ 76 (238)
T PRK08264 2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-----LGPRVVPLQLDVTDPASVAAAAEAASDVTI 76 (238)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-----cCCceEEEEecCCCHHHHHHHHHhcCCCCE
Confidence 345678999999999999999999999999 99999999876654 2456889999999999988643 346999
Q ss_pred EEeccCCCCCCC----CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccccc
Q 028043 155 VICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 155 li~~Ag~~~~~~----~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~ 208 (214)
|||+||...... ...++....+++|+.++.++++++. .+.+++|++||..++.+
T Consensus 77 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~ 139 (238)
T PRK08264 77 LVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVN 139 (238)
T ss_pred EEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccC
Confidence 999999832111 2223345567899999999998762 35678999999877653
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.5e-17 Score=136.25 Aligned_cols=125 Identities=22% Similarity=0.256 Sum_probs=94.2
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhccc--CCCCEEEEEecCCChhccchhh------hCC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
+.+|+++||||+||||++++++|+++|++|++++|+.+..+ ..+.+ .+.++.++.+|++|++++++.+ +++
T Consensus 4 ~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~ 82 (263)
T PRK08226 4 LTGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEK-LADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGR 82 (263)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHH-HHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 56799999999999999999999999999999999875322 22111 1345778999999999887643 457
Q ss_pred CcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEccccc
Q 028043 152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGV 205 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~ 205 (214)
+|+||||||...... ...+..++.+++|+.++.++++++. .+.++||++||..+
T Consensus 83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~ 144 (263)
T PRK08226 83 IDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTG 144 (263)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHh
Confidence 999999999854221 1112234467899999999998762 24568999999766
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.9e-17 Score=136.87 Aligned_cols=127 Identities=20% Similarity=0.250 Sum_probs=98.4
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCCCc
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGVT 153 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~~d 153 (214)
+++++||||+||||++++++|+++|++|++++|++++.+++.+.+. +.++.++.+|++|++++++++ ++++|
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 80 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID 80 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 4789999999999999999999999999999999877665443322 346788999999999887643 34799
Q ss_pred EEEeccCCCCCCCC----CCCCCCchhHHHHHHHHHHHHHhc----cCCCeEEEEcccccccc
Q 028043 154 HVICCTGTTAFPSR----RWDGDNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 154 ~li~~Ag~~~~~~~----~~~~~~~~~~vNv~g~~~l~~a~~----~~~~~iV~vSS~~~~~~ 208 (214)
+||||||....... +++...+.+++|+.++.++++++. ...+++|++||..++.+
T Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~ 143 (263)
T PRK06181 81 ILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTG 143 (263)
T ss_pred EEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCC
Confidence 99999997653221 222234567999999999998762 34578999999887654
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.6e-17 Score=143.38 Aligned_cols=126 Identities=13% Similarity=-0.007 Sum_probs=95.1
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
+.-++|+|+||||+|+||++++++|.++|++|++++|....... .. ....+++.+|++|.+.+.. ++.++|+|||
T Consensus 17 ~~~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~---~~-~~~~~~~~~Dl~d~~~~~~-~~~~~D~Vih 91 (370)
T PLN02695 17 WPSEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMS---ED-MFCHEFHLVDLRVMENCLK-VTKGVDHVFN 91 (370)
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccccc---cc-cccceEEECCCCCHHHHHH-HHhCCCEEEE
Confidence 44467899999999999999999999999999999986432111 00 1125678899999988775 3568999999
Q ss_pred ccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEcccccccc
Q 028043 158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 158 ~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~ 208 (214)
+|+..........+....+..|+.++.+++++++ .+.+++|++||.++|+.
T Consensus 92 ~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~ 143 (370)
T PLN02695 92 LAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPE 143 (370)
T ss_pred cccccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCC
Confidence 9986531111112333456789999999999885 47889999999988874
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=2e-17 Score=136.51 Aligned_cols=130 Identities=16% Similarity=0.118 Sum_probs=95.8
Q ss_pred CCCCCEEEEEcCch--HHHHHHHHHHHHCCCeEEEEEcC-----------hhHHHHHhcccC--CCCEEEEEecCCChhc
Q 028043 79 ASSSKLVLVAGGSG--GVGQLVVASLLSRNIKSRLLLRD-----------PEKATTLFGKQD--EETLQVCKGDTRNPKD 143 (214)
Q Consensus 79 ~~~~k~vlITGasg--gIG~~la~~L~~~G~~V~~~~r~-----------~~~~~~~~~~~~--~~~~~~v~~Di~d~~~ 143 (214)
.+++|+++||||+| |||++++++|+++|++|++++|+ ......+.+.+. +.+++++.+|++|+++
T Consensus 2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 81 (256)
T PRK12748 2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYA 81 (256)
T ss_pred CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence 35679999999995 89999999999999999999987 211111222111 3458889999999998
Q ss_pred cchhh------hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccccc
Q 028043 144 LDPAI------FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 144 v~~~~------~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~ 208 (214)
+++++ ++++|+||||||...... ..+++.+..+++|+.|+.++++++. ...++||++||..++.+
T Consensus 82 ~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~ 160 (256)
T PRK12748 82 PNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGP 160 (256)
T ss_pred HHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCC
Confidence 77633 367999999999754221 1223345567899999999998772 23468999999887654
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.2e-17 Score=135.36 Aligned_cols=123 Identities=17% Similarity=0.230 Sum_probs=93.9
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChh-HHHHHhcccC--CCCEEEEEecCCChhccchhh------hC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-KATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
+++|+++||||+||||++++++|+++|++|++++|+.+ ..+.+...+. +.++.++.+|++|++++++.+ ++
T Consensus 4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (248)
T PRK07806 4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFG 83 (248)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 56799999999999999999999999999999999753 3333322221 345788999999999887633 25
Q ss_pred CCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEccccc
Q 028043 151 GVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGV 205 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~ 205 (214)
++|+||||||..... ..++...+++|+.|+.++++++.+ ..+++|++||..+
T Consensus 84 ~~d~vi~~ag~~~~~---~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~ 138 (248)
T PRK07806 84 GLDALVLNASGGMES---GMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQA 138 (248)
T ss_pred CCcEEEECCCCCCCC---CCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchh
Confidence 799999999865321 123455678999999999998843 2358999999654
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.9e-17 Score=135.47 Aligned_cols=126 Identities=16% Similarity=0.197 Sum_probs=92.8
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEE-cChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLL-RDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~-r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
++|+++||||+||||++++++|+++|++|++.. ++....++..+++. +..+..+.+|++|.+++++++ +++
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE 81 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 578999999999999999999999999988854 44444333322221 335677899999999887643 357
Q ss_pred CcEEEeccCCCCCC---CCCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccc
Q 028043 152 VTHVICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVT 206 (214)
Q Consensus 152 ~d~li~~Ag~~~~~---~~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~ 206 (214)
+|+||||||..... ...+++..+.+++|+.++..+++++ +.+.++||++||..+.
T Consensus 82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~ 144 (246)
T PRK12938 82 IDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQ 144 (246)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhcc
Confidence 99999999986421 1223344667799999988887765 2345799999998654
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.2e-17 Score=135.87 Aligned_cols=125 Identities=16% Similarity=0.167 Sum_probs=94.0
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC---CCCEEEEEecCCChhccchhh------hCCCc
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAI------FEGVT 153 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~v~~Di~d~~~v~~~~------~~~~d 153 (214)
|+++||||++|||++++++|+ +|++|++++|++++++++.+++. ...+.++.+|++|++++++++ ++++|
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 79 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS 79 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence 579999999999999999998 59999999999988877655543 224778999999999988643 46899
Q ss_pred EEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh----c-cC-CCeEEEEcccccccc
Q 028043 154 HVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SS-LKRIVLVSSVGVTKF 208 (214)
Q Consensus 154 ~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~----~-~~-~~~iV~vSS~~~~~~ 208 (214)
++|||||...... ...+...+..++|+.+..++++++ . .+ .++||++||.++..+
T Consensus 80 ~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~ 143 (246)
T PRK05599 80 LAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRA 143 (246)
T ss_pred EEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccC
Confidence 9999999864221 111122344578888888766544 2 22 478999999877543
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.6e-17 Score=141.15 Aligned_cols=121 Identities=17% Similarity=0.176 Sum_probs=94.6
Q ss_pred EEEcCchHHHHHHHHHHHHCC-CeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCCCcEEE
Q 028043 86 LVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGVTHVI 156 (214)
Q Consensus 86 lITGasggIG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~~d~li 156 (214)
+||||++|||++++++|+++| ++|++++|+.++.+++.+++. ...+.++.+|++|.+++++++ ++++|+||
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI 80 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV 80 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 699999999999999999999 999999999887776655443 345778899999999987643 35799999
Q ss_pred eccCCCCCC----CCCCCCCCchhHHHHHHHHHHHHHh----cc-C--CCeEEEEcccccc
Q 028043 157 CCTGTTAFP----SRRWDGDNTPEKVDWEGVRNLVSAL----PS-S--LKRIVLVSSVGVT 206 (214)
Q Consensus 157 ~~Ag~~~~~----~~~~~~~~~~~~vNv~g~~~l~~a~----~~-~--~~~iV~vSS~~~~ 206 (214)
||||+.... ..+.+..+..+++|+.|++++++++ +. + .++||++||.+++
T Consensus 81 nnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~ 141 (308)
T PLN00015 81 CNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGN 141 (308)
T ss_pred ECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccc
Confidence 999985321 1223344667899999999988765 22 2 4799999998764
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.7e-17 Score=154.36 Aligned_cols=124 Identities=15% Similarity=0.144 Sum_probs=97.6
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHC-CCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhc-cchhhhCCCcEEEe
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD-LDPAIFEGVTHVIC 157 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~-v~~~~~~~~d~li~ 157 (214)
.++|+|+||||+|+||++++++|+++ |++|++++|+........ ...+++++.+|++|.+. +++ ++.++|+|||
T Consensus 313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~---~~~~~~~~~gDl~d~~~~l~~-~l~~~D~ViH 388 (660)
T PRK08125 313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFL---GHPRFHFVEGDISIHSEWIEY-HIKKCDVVLP 388 (660)
T ss_pred hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhc---CCCceEEEeccccCcHHHHHH-HhcCCCEEEE
Confidence 35789999999999999999999985 799999999775433322 13468899999998665 444 4678999999
Q ss_pred ccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEEcccccccc
Q 028043 158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 158 ~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~vSS~~~~~~ 208 (214)
+||.... .....++...+++|+.++.+++++++...+++|++||.++|+.
T Consensus 389 lAa~~~~-~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~~~~V~~SS~~vyg~ 438 (660)
T PRK08125 389 LVAIATP-IEYTRNPLRVFELDFEENLKIIRYCVKYNKRIIFPSTSEVYGM 438 (660)
T ss_pred CccccCc-hhhccCHHHHHHhhHHHHHHHHHHHHhcCCeEEEEcchhhcCC
Confidence 9997652 2223344567799999999999999653489999999998874
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.7e-17 Score=152.59 Aligned_cols=131 Identities=21% Similarity=0.281 Sum_probs=103.4
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
..+++|+++||||+||||++++++|+++|++|++++|+++.++++.+++. +.++.++.+|++|.+++++++ +
T Consensus 367 ~~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 446 (657)
T PRK07201 367 GPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEH 446 (657)
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence 45678999999999999999999999999999999999988776654432 346888999999999888643 4
Q ss_pred CCCcEEEeccCCCCCCC--CC---CCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 150 EGVTHVICCTGTTAFPS--RR---WDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~--~~---~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
+++|++|||||...... .. +++....+++|+.|+.++++++ +.+.++||++||.+++.+
T Consensus 447 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~ 515 (657)
T PRK07201 447 GHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTN 515 (657)
T ss_pred CCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCC
Confidence 57999999999753211 11 2234567799999999988865 235579999999988754
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.2e-17 Score=141.78 Aligned_cols=130 Identities=10% Similarity=0.084 Sum_probs=93.9
Q ss_pred CCCCCCEEEEEcC--chHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC-----------CC----CEEEEEecC--
Q 028043 78 PASSSKLVLVAGG--SGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-----------EE----TLQVCKGDT-- 138 (214)
Q Consensus 78 ~~~~~k~vlITGa--sggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-----------~~----~~~~v~~Di-- 138 (214)
++++||+++|||| ++|||+++|++|++.|++|++ +|+.++++++...+. .. ....+.+|+
T Consensus 5 ~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 83 (303)
T PLN02730 5 IDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVF 83 (303)
T ss_pred cCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceec
Confidence 4578999999999 799999999999999999998 777666555432221 01 135688899
Q ss_pred CChh------------------ccchhh------hCCCcEEEeccCCCC---CC--CCCCCCCCchhHHHHHHHHHHHHH
Q 028043 139 RNPK------------------DLDPAI------FEGVTHVICCTGTTA---FP--SRRWDGDNTPEKVDWEGVRNLVSA 189 (214)
Q Consensus 139 ~d~~------------------~v~~~~------~~~~d~li~~Ag~~~---~~--~~~~~~~~~~~~vNv~g~~~l~~a 189 (214)
++++ ++++++ ++++|+||||||... .+ ..+++++.+.+++|+.|++.++++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~ 163 (303)
T PLN02730 84 DTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQH 163 (303)
T ss_pred CccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence 4444 344322 578999999997532 11 233455677889999999999987
Q ss_pred hcc---CCCeEEEEcccccccc
Q 028043 190 LPS---SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 190 ~~~---~~~~iV~vSS~~~~~~ 208 (214)
+.+ ..++||++||.++...
T Consensus 164 ~~p~m~~~G~II~isS~a~~~~ 185 (303)
T PLN02730 164 FGPIMNPGGASISLTYIASERI 185 (303)
T ss_pred HHHHHhcCCEEEEEechhhcCC
Confidence 732 2379999999877543
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.4e-17 Score=138.99 Aligned_cols=131 Identities=12% Similarity=0.090 Sum_probs=99.2
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChh-HHHHHhcccC--CCCEEEEEecCCChhccchhh------
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-KATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
..+++|+++||||+||||++++++|+++|++|++++|+.+ ..+...+.+. +.++.++.+|++|.+++++.+
T Consensus 42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~ 121 (290)
T PRK06701 42 GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRE 121 (290)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4567899999999999999999999999999999998753 2333322222 345778999999999887643
Q ss_pred hCCCcEEEeccCCCCCC----CCCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEcccccccc
Q 028043 149 FEGVTHVICCTGTTAFP----SRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~----~~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||..... ...+++....+++|+.|+.++++++.+ ..++||++||.+++..
T Consensus 122 ~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~ 188 (290)
T PRK06701 122 LGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEG 188 (290)
T ss_pred cCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCC
Confidence 35799999999975421 122233456789999999999998743 3368999999888754
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.4e-17 Score=134.11 Aligned_cols=128 Identities=20% Similarity=0.253 Sum_probs=97.2
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEc-ChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-DPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r-~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
+++|+++||||+||||++++++|+++|++|+++.+ +++..++..+.+. +.++.++.+|++|++++.+++ ++
T Consensus 4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (247)
T PRK12935 4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFG 83 (247)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 45799999999999999999999999999987654 4555544433332 345788999999999887643 35
Q ss_pred CCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEccccccc
Q 028043 151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~ 207 (214)
.+|+||||||...... ..++...+.+++|+.++.++++++. ...+++|++||..+..
T Consensus 84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~ 148 (247)
T PRK12935 84 KVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQA 148 (247)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcC
Confidence 6999999999864321 2224456677999999999999773 3457999999987653
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=2e-17 Score=136.24 Aligned_cols=130 Identities=17% Similarity=0.167 Sum_probs=100.5
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
++.+|+++||||+|+||++++++|+++|++|++++|++++++++.+.+. ..++.++.+|+++++++++.+ ++
T Consensus 6 ~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 85 (258)
T PRK06949 6 NLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAG 85 (258)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 4578999999999999999999999999999999999988776654432 346788999999999887643 35
Q ss_pred CCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cC--------CCeEEEEcccccccc
Q 028043 151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SS--------LKRIVLVSSVGVTKF 208 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~--------~~~iV~vSS~~~~~~ 208 (214)
++|++|||||...... ...++....+++|+.|+.++++++. .. .+++|++||..++.+
T Consensus 86 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~ 159 (258)
T PRK06949 86 TIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRV 159 (258)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCC
Confidence 7999999999754211 1123345567899999999888652 11 358999999887643
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.9e-17 Score=135.62 Aligned_cols=127 Identities=14% Similarity=0.139 Sum_probs=95.4
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEc-ChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-DPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r-~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
++|+++||||+||||++++++|+++|++|+++.+ +.+..+++.+++. +.++.++.+|++|.+++++++ +++
T Consensus 1 ~~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 80 (256)
T PRK12743 1 MAQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGR 80 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 3589999999999999999999999999998865 4444444433322 346888999999999887633 457
Q ss_pred CcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhcc------CCCeEEEEccccccc
Q 028043 152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS------SLKRIVLVSSVGVTK 207 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~------~~~~iV~vSS~~~~~ 207 (214)
+|+||||||...... ..+++....+++|+.|+.++++++.+ ..++||++||.....
T Consensus 81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~ 145 (256)
T PRK12743 81 IDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHT 145 (256)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccC
Confidence 999999999865221 22234456779999999999987621 136899999987644
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.9e-17 Score=135.20 Aligned_cols=130 Identities=13% Similarity=0.183 Sum_probs=96.6
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChh-HHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-KATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
++++|+++||||+|+||++++++|+++|++|+++.|+.+ ..+++.+.+. +.++.++.+|++|++++++++ +
T Consensus 2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (245)
T PRK12937 2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAF 81 (245)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 457899999999999999999999999999988877543 3333332221 346788999999999887743 3
Q ss_pred CCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEcccccccc
Q 028043 150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~~ 208 (214)
+++|+||||||...... ...++..+.+++|+.|+.++++++.+ ..++||++||.++..+
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~ 146 (245)
T PRK12937 82 GRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALP 146 (245)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCC
Confidence 57999999999754211 12223455678999999999987732 3368999999876543
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=4.2e-17 Score=132.65 Aligned_cols=124 Identities=18% Similarity=0.233 Sum_probs=94.5
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEc-ChhHHHHHhcccCCCCEEEEEecCCChhccchhh--hCCCcEEE
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-DPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--FEGVTHVI 156 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~--~~~~d~li 156 (214)
+++|+++||||+||||++++++|+++|++|+++.| +++..+++.++. ++.++.+|++|.+++.+.+ ++++|++|
T Consensus 4 ~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~---~~~~~~~D~~~~~~~~~~~~~~~~id~li 80 (237)
T PRK12742 4 FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET---GATAVQTDSADRDAVIDVVRKSGALDILV 80 (237)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh---CCeEEecCCCCHHHHHHHHHHhCCCcEEE
Confidence 56899999999999999999999999999988866 455555543332 3567889999998877643 45799999
Q ss_pred eccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEcccccc
Q 028043 157 CCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVT 206 (214)
Q Consensus 157 ~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~ 206 (214)
||||...... .+.++.++.+++|+.|+..+++.+.+ ..++||++||..+.
T Consensus 81 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~ 136 (237)
T PRK12742 81 VNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGD 136 (237)
T ss_pred ECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccc
Confidence 9999864211 22234567789999999999876632 34699999998763
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=2e-17 Score=135.07 Aligned_cols=127 Identities=21% Similarity=0.239 Sum_probs=98.7
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh--hCCCcEEE
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--FEGVTHVI 156 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~--~~~~d~li 156 (214)
++++|+++||||+|+||+++++.|+++|++|++++|++++.+++.+.. +..++.+|++|.+++++.+ .+++|+||
T Consensus 6 ~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~~d~vi 82 (245)
T PRK07060 6 DFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET---GCEPLRLDVGDDAAIRAALAAAGAFDGLV 82 (245)
T ss_pred ccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCeEEEecCCCHHHHHHHHHHhCCCCEEE
Confidence 457799999999999999999999999999999999988776655432 3567889999998887643 24699999
Q ss_pred eccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhcc-----C-CCeEEEEcccccccc
Q 028043 157 CCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS-----S-LKRIVLVSSVGVTKF 208 (214)
Q Consensus 157 ~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~-----~-~~~iV~vSS~~~~~~ 208 (214)
||||...... ...++..+.+.+|+.++.++++++.+ + .++||++||.+++.+
T Consensus 83 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~ 143 (245)
T PRK07060 83 NCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVG 143 (245)
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCC
Confidence 9999865321 12233455567999999999987722 2 378999999877654
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.6e-17 Score=144.50 Aligned_cols=110 Identities=20% Similarity=0.219 Sum_probs=88.5
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
.+++|+++||||+||||++++++|+++|++|++++|++++.++..... ...+..+.+|++|++++++ .++++|++|||
T Consensus 175 sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~-~~~v~~v~~Dvsd~~~v~~-~l~~IDiLInn 252 (406)
T PRK07424 175 SLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGE-DLPVKTLHWQVGQEAALAE-LLEKVDILIIN 252 (406)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhc-CCCeEEEEeeCCCHHHHHH-HhCCCCEEEEC
Confidence 457899999999999999999999999999999999887665432211 2346778999999999886 47899999999
Q ss_pred cCCCCCCCCCCCCCCchhHHHHHHHHHHHHHh
Q 028043 159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL 190 (214)
Q Consensus 159 Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~ 190 (214)
||.........++..+.+++|+.|+.++++++
T Consensus 253 AGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~ 284 (406)
T PRK07424 253 HGINVHGERTPEAINKSYEVNTFSAWRLMELF 284 (406)
T ss_pred CCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99865333333445677899999999999976
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.4e-17 Score=135.12 Aligned_cols=128 Identities=15% Similarity=0.202 Sum_probs=98.3
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
.+++|+++||||+|+||++++++|+++|++|++++|+++..+++.+.....++.++.+|++|++++++++ ++++
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 87 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGL 87 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 3577999999999999999999999999999999999877766554443335788999999999887633 3589
Q ss_pred cEEEeccCCCCCCC----CCCCCCCchhHHHHHHHHHHHHHh----cc-CC-CeEEEEcccccc
Q 028043 153 THVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSAL----PS-SL-KRIVLVSSVGVT 206 (214)
Q Consensus 153 d~li~~Ag~~~~~~----~~~~~~~~~~~vNv~g~~~l~~a~----~~-~~-~~iV~vSS~~~~ 206 (214)
|+|||+||...... ...+.....+++|+.++.++++++ +. +. ++|+++||.++.
T Consensus 88 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~ 151 (264)
T PRK12829 88 DVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGR 151 (264)
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccc
Confidence 99999999863211 112234566789999999988876 22 33 578888887653
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.3e-17 Score=134.46 Aligned_cols=123 Identities=15% Similarity=0.097 Sum_probs=92.9
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCCcEE
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVTHV 155 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~d~l 155 (214)
+|+++||||+||||++++++|+++|++|++++|+++...+..+ ..++.++.+|++|++++++.+ ++++|++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 78 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLR---QAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAI 78 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---HcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEE
Confidence 5799999999999999999999999999999998765432222 123678899999999887633 4579999
Q ss_pred EeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc----c-C--CCeEEEEccccccc
Q 028043 156 ICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP----S-S--LKRIVLVSSVGVTK 207 (214)
Q Consensus 156 i~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~----~-~--~~~iV~vSS~~~~~ 207 (214)
|||||...... ..+++.++.+++|+.++..+++++. . + .++||++||..+..
T Consensus 79 v~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~ 140 (236)
T PRK06483 79 IHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEK 140 (236)
T ss_pred EECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhcc
Confidence 99999753211 1223446677999999998877662 2 2 46899999987643
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=2e-17 Score=137.35 Aligned_cols=126 Identities=10% Similarity=0.135 Sum_probs=93.8
Q ss_pred CCCCEEEEEcC--chHHHHHHHHHHHHCCCeEEEEEcC---hhHHHHHhcccCCCCEEEEEecCCChhccchhh------
Q 028043 80 SSSKLVLVAGG--SGGVGQLVVASLLSRNIKSRLLLRD---PEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 80 ~~~k~vlITGa--sggIG~~la~~L~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
+++|+++|||| ++|||++++++|++.|++|++++|. .+.++++.++.. ....+++|++|++++++++
T Consensus 4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~ 81 (260)
T PRK06997 4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG--SDLVFPCDVASDEQIDALFASLGQH 81 (260)
T ss_pred cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcC--CcceeeccCCCHHHHHHHHHHHHHH
Confidence 46799999996 6899999999999999999988654 344444433332 2346889999999998744
Q ss_pred hCCCcEEEeccCCCCCC--------CCCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEccccccc
Q 028043 149 FEGVTHVICCTGTTAFP--------SRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTK 207 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~--------~~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~ 207 (214)
++++|++|||||..... ..+.+++...+++|+.|+..+++++.+ ..++||++||.++..
T Consensus 82 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~ 151 (260)
T PRK06997 82 WDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAER 151 (260)
T ss_pred hCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEecccccc
Confidence 57899999999985421 112233456679999999999987732 236899999987643
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.8e-17 Score=136.32 Aligned_cols=127 Identities=15% Similarity=0.172 Sum_probs=94.0
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChh-HHHHHhcccC--CCCEEEEEecCCChhccchhh------hCCC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-KATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
.|+++||||+||||++++++|+++|++|++++|+.. ..++..+.+. ..++.++.+|++|++++.+++ ++++
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI 81 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 478999999999999999999999999999998643 3333222221 346888999999999877632 3579
Q ss_pred cEEEeccCCCCCCC-----CCCCCCCchhHHHHHHHHHHHHHhc-----c-C-----CCeEEEEcccccccc
Q 028043 153 THVICCTGTTAFPS-----RRWDGDNTPEKVDWEGVRNLVSALP-----S-S-----LKRIVLVSSVGVTKF 208 (214)
Q Consensus 153 d~li~~Ag~~~~~~-----~~~~~~~~~~~vNv~g~~~l~~a~~-----~-~-----~~~iV~vSS~~~~~~ 208 (214)
|++|||||...... ...+...+.+++|+.|+.++++++. . + .++||++||..+..+
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~ 153 (256)
T PRK12745 82 DCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMV 153 (256)
T ss_pred CEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccC
Confidence 99999999754211 1223345567899999999988762 1 1 457999999887543
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.5e-17 Score=133.74 Aligned_cols=129 Identities=20% Similarity=0.201 Sum_probs=97.1
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcC----hhHHHHHhcccC--CCCEEEEEecCCChhccchhh-----
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD----PEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI----- 148 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~----~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~----- 148 (214)
+++|+++||||+||||++++++|+++|++|++++|. .+..+++.+++. +..+.++.+|++|.+++++.+
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 83 (249)
T PRK12827 4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVE 83 (249)
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 457899999999999999999999999999997653 344443333222 346788999999999888643
Q ss_pred -hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc------cCCCeEEEEcccccccc
Q 028043 149 -FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP------SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 -~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~------~~~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||...... ..+++....+++|+.++.++++++. .+.+++|++||.+++.+
T Consensus 84 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~ 153 (249)
T PRK12827 84 EFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRG 153 (249)
T ss_pred HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCC
Confidence 357999999999865211 2223345567899999999998774 24578999999887643
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=7.8e-17 Score=132.99 Aligned_cols=122 Identities=33% Similarity=0.440 Sum_probs=95.3
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCCh-hccchhhh-CCCcEE
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP-KDLDPAIF-EGVTHV 155 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~-~~v~~~~~-~~~d~l 155 (214)
.+..+|+|+||||+|+||++++++|+++|++|+++.|++++....... ..+++++.+|++|. +.+.+. + .++|+|
T Consensus 13 ~~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~l~~~-~~~~~d~v 89 (251)
T PLN00141 13 ENVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQ--DPSLQIVRADVTEGSDKLVEA-IGDDSDAV 89 (251)
T ss_pred ccccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhccc--CCceEEEEeeCCCCHHHHHHH-hhcCCCEE
Confidence 344578999999999999999999999999999999998776543321 24688999999983 555543 5 589999
Q ss_pred EeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccccccc
Q 028043 156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 156 i~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~ 207 (214)
||++|.... . +....+++|+.|+.+++++++ .+.++||++||.++|+
T Consensus 90 i~~~g~~~~-~----~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g 137 (251)
T PLN00141 90 ICATGFRRS-F----DPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNG 137 (251)
T ss_pred EECCCCCcC-C----CCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccC
Confidence 999986431 1 122335789999999999985 4778999999998775
|
|
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.72 E-value=5.3e-18 Score=133.98 Aligned_cols=126 Identities=21% Similarity=0.149 Sum_probs=100.7
Q ss_pred CCEEEEEcCc-hHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh-------hCCCc
Q 028043 82 SKLVLVAGGS-GGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-------FEGVT 153 (214)
Q Consensus 82 ~k~vlITGas-ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~-------~~~~d 153 (214)
.|+|+|||++ ||||.+++++|.++|+.|+++.|+.+....+..+ .++...+.|+++++++.... .+.+|
T Consensus 7 ~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~---~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld 83 (289)
T KOG1209|consen 7 PKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQ---FGLKPYKLDVSKPEEVVTVSGEVRANPDGKLD 83 (289)
T ss_pred CCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHh---hCCeeEEeccCChHHHHHHHHHHhhCCCCceE
Confidence 4789999865 8999999999999999999999999988876532 35788999999999887622 45799
Q ss_pred EEEeccCCCCC-CC--CCCCCCCchhHHHHHHHHHHHHHhc----cCCCeEEEEccccccccCC
Q 028043 154 HVICCTGTTAF-PS--RRWDGDNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVTKFNE 210 (214)
Q Consensus 154 ~li~~Ag~~~~-~~--~~~~~~~~~~~vNv~g~~~l~~a~~----~~~~~iV~vSS~~~~~~~~ 210 (214)
+||||||..-. |. ......++.+++|+.|..++++++. ...+.||+++|..++-+.+
T Consensus 84 ~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfp 147 (289)
T KOG1209|consen 84 LLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFP 147 (289)
T ss_pred EEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccc
Confidence 99999998632 22 2233457788999999999999874 3457999999999865543
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=5.4e-17 Score=134.28 Aligned_cols=130 Identities=19% Similarity=0.178 Sum_probs=95.3
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh-hHHHHHhcccC--CCCEEEEEecCCChhccchhh------
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP-EKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~-~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
..+++|+++||||+|+||++++++|+++|++|+++.|+. +..+.+.+.+. +.++.++.+|++|.+++++.+
T Consensus 3 ~~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~ 82 (261)
T PRK08936 3 SDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKE 82 (261)
T ss_pred cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Confidence 346789999999999999999999999999999988854 33333333222 345778999999999887633
Q ss_pred hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh----cc-C-CCeEEEEccccccc
Q 028043 149 FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----PS-S-LKRIVLVSSVGVTK 207 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~----~~-~-~~~iV~vSS~~~~~ 207 (214)
++++|++|||||...... ...+..++.+++|+.++..+++++ +. + .++||++||.....
T Consensus 83 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~ 150 (261)
T PRK08936 83 FGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQI 150 (261)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccC
Confidence 357999999999764221 111233456799999988777654 22 2 46899999987654
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=5.7e-17 Score=132.76 Aligned_cols=129 Identities=17% Similarity=0.203 Sum_probs=96.6
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
+++++++||||+|+||+++++.|+++|++|++++|++++.++..+++. +.++.++++|++|++++++.+ +++
T Consensus 3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (253)
T PRK08217 3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQ 82 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 568999999999999999999999999999999999877666544332 346788999999998876532 257
Q ss_pred CcEEEeccCCCCCC------------CCCCCCCCchhHHHHHHHHHHHHHh-----cc-CCCeEEEEcccccccc
Q 028043 152 VTHVICCTGTTAFP------------SRRWDGDNTPEKVDWEGVRNLVSAL-----PS-SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 152 ~d~li~~Ag~~~~~------------~~~~~~~~~~~~vNv~g~~~l~~a~-----~~-~~~~iV~vSS~~~~~~ 208 (214)
+|+||||||..... ...++.....+++|+.|+.++++++ +. ..++||++||.+.++.
T Consensus 83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~ 157 (253)
T PRK08217 83 LNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGN 157 (253)
T ss_pred CCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCC
Confidence 99999999975421 0111223446688999998887754 12 3357999999876653
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.7e-17 Score=134.30 Aligned_cols=125 Identities=18% Similarity=0.202 Sum_probs=95.8
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCCCcE
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGVTH 154 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~~d~ 154 (214)
|+++||||+|+||++++++|++.|++|++++|+++..+++.+.+. +.++.++.+|++|++++++++ ++++|+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 80 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV 80 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 589999999999999999999999999999999877665544332 345788999999999887643 457999
Q ss_pred EEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc----c-C-CCeEEEEccccccc
Q 028043 155 VICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP----S-S-LKRIVLVSSVGVTK 207 (214)
Q Consensus 155 li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~----~-~-~~~iV~vSS~~~~~ 207 (214)
||||||...... ...+..++.+++|+.++..+++++. . + .++||++||..+..
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~ 142 (254)
T TIGR02415 81 MVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHE 142 (254)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcC
Confidence 999999864211 2223345668899999998877652 2 2 36899999987654
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.8e-17 Score=140.22 Aligned_cols=125 Identities=18% Similarity=0.172 Sum_probs=92.0
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCe-EEEEEcCh--hHHHHHhcccCCCCEEEEEecCCChhccchhhhC-CCcEEEec
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRDP--EKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-GVTHVICC 158 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~-V~~~~r~~--~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~-~~d~li~~ 158 (214)
|+|+||||+|+||++++++|+++|++ |+++++.. ...+.........+++++.+|++|.+++++++-+ ++|+|||+
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 80 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMHL 80 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEEC
Confidence 47999999999999999999999986 55555532 1222222111134577899999999999875322 59999999
Q ss_pred cCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc----------CCCeEEEEcccccccc
Q 028043 159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS----------SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 159 Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~----------~~~~iV~vSS~~~~~~ 208 (214)
||.... ...+......+++|+.|+.++++++++ +.+++|++||.++|+.
T Consensus 81 A~~~~~-~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~ 139 (352)
T PRK10084 81 AAESHV-DRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGD 139 (352)
T ss_pred CcccCC-cchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCC
Confidence 997642 222344567889999999999998853 3468999999988874
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.4e-17 Score=135.76 Aligned_cols=125 Identities=15% Similarity=0.139 Sum_probs=95.1
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC---CCCEEEEEecCCChhccchhh------hCCCc
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAI------FEGVT 153 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~v~~Di~d~~~v~~~~------~~~~d 153 (214)
|+++||||+||||++++++|+++|++|++++|+++..++..+++. .....++.+|++|++++++.. ++++|
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD 80 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 579999999999999999999999999999999877665543332 223456789999998877532 45799
Q ss_pred EEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----c-CCCeEEEEccccccc
Q 028043 154 HVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----S-SLKRIVLVSSVGVTK 207 (214)
Q Consensus 154 ~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~-~~~~iV~vSS~~~~~ 207 (214)
+||||||...... ..+++....+++|+.|+.++++++. . ..++||++||..+..
T Consensus 81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~ 143 (272)
T PRK07832 81 VVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLV 143 (272)
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccC
Confidence 9999999754211 2333446678999999999999762 1 246899999987643
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.8e-17 Score=134.67 Aligned_cols=129 Identities=16% Similarity=0.085 Sum_probs=98.1
Q ss_pred CCCCCEEEEEcCch-HHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC----CCCEEEEEecCCChhccchhh-----
Q 028043 79 ASSSKLVLVAGGSG-GVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAI----- 148 (214)
Q Consensus 79 ~~~~k~vlITGasg-gIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~v~~Di~d~~~v~~~~----- 148 (214)
.+.+|+++||||+| |||+++++.|+++|++|++++|+.+++++..+.+. ..++.++++|++|++++++++
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 93 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE 93 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 45679999999996 89999999999999999999999877665544332 235788999999998887633
Q ss_pred -hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cC-CCeEEEEccccccc
Q 028043 149 -FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SS-LKRIVLVSSVGVTK 207 (214)
Q Consensus 149 -~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~-~~~iV~vSS~~~~~ 207 (214)
++++|+||||||...... ...++..+.+++|+.++..+++++. .. .++||++||..++.
T Consensus 94 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~ 162 (262)
T PRK07831 94 RLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWR 162 (262)
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcC
Confidence 367999999999754211 1223345567899999999888762 22 46899999987654
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.7e-17 Score=132.15 Aligned_cols=119 Identities=14% Similarity=0.114 Sum_probs=93.4
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh---hCCCcEEEecc
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI---FEGVTHVICCT 159 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~---~~~~d~li~~A 159 (214)
|+++||||+||||++++++|+++|++|++++|+.++++++.+.+ ++.++++|++|++++++++ .+++|++||||
T Consensus 1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~a 77 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL---DVDAIVCDNTDPASLEEARGLFPHHLDTIVNVP 77 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---cCcEEecCCCCHHHHHHHHHHHhhcCcEEEECC
Confidence 36999999999999999999999999999999998877665433 3567899999999988643 13699999999
Q ss_pred CCCCC---CC-----CCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEcccc
Q 028043 160 GTTAF---PS-----RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVG 204 (214)
Q Consensus 160 g~~~~---~~-----~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~ 204 (214)
|.... +. ...++..+.+++|+.++.++++++.+ ..++||++||.+
T Consensus 78 g~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~ 133 (223)
T PRK05884 78 APSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPEN 133 (223)
T ss_pred CccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCC
Confidence 85321 10 01234567789999999999998732 237999999976
|
|
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.9e-17 Score=137.15 Aligned_cols=126 Identities=21% Similarity=0.285 Sum_probs=102.5
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh----hHHHHHhccc-CCCCEEEEEecCCChhccchhhhC--CCcE
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP----EKATTLFGKQ-DEETLQVCKGDTRNPKDLDPAIFE--GVTH 154 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~----~~~~~~~~~~-~~~~~~~v~~Di~d~~~v~~~~~~--~~d~ 154 (214)
+++||||||+|+||++.+.+|+++|+.|+++|.-. +.+....... ++..+.++++|+.|.+.+++ +|. .+|.
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~k-vF~~~~fd~ 80 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEK-LFSEVKFDA 80 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHH-HHhhcCCce
Confidence 57899999999999999999999999999998632 2232222222 14679999999999999998 454 6999
Q ss_pred EEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccccccccC
Q 028043 155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 155 li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~~ 209 (214)
|+|.|+...+. ...+++..++..|+.|+.++++.++ .+++.+|+.||..+||..
T Consensus 81 V~Hfa~~~~vg-eS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p 135 (343)
T KOG1371|consen 81 VMHFAALAAVG-ESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLP 135 (343)
T ss_pred EEeehhhhccc-hhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCc
Confidence 99999988743 3335667888999999999999995 478999999999999854
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.7e-17 Score=138.84 Aligned_cols=118 Identities=27% Similarity=0.362 Sum_probs=96.7
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccCCC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT 162 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag~~ 162 (214)
|+|+||||+|+||++++++|+++|++|++++|+++....+. ..+++++.+|++|.+++++ ++.++|+|||+|+..
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~D~~~~~~l~~-~~~~~d~vi~~a~~~ 75 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLE----GLDVEIVEGDLRDPASLRK-AVAGCRALFHVAADY 75 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccc----cCCceEEEeeCCCHHHHHH-HHhCCCEEEEeceec
Confidence 47999999999999999999999999999999876543321 3357889999999999987 467899999999864
Q ss_pred CCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEcccccccc
Q 028043 163 AFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 163 ~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~ 208 (214)
.. ...+....+++|+.++.+++++++ .+.+++|++||.++|+.
T Consensus 76 ~~---~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~ 119 (328)
T TIGR03466 76 RL---WAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGV 119 (328)
T ss_pred cc---CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCc
Confidence 31 123345678999999999999884 46789999999988874
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=6.3e-17 Score=132.60 Aligned_cols=126 Identities=20% Similarity=0.150 Sum_probs=92.3
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEE-cChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCCC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLL-RDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~-r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
+|+++||||+||||+++++.|+++|++|+++. |+++..++..+.+. +.++.++++|++|++++++++ ++++
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRL 81 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence 57999999999999999999999999998765 56555554433322 346888999999999887633 3579
Q ss_pred cEEEeccCCCCCCC----CCCCCCCchhHHHHHHHHHHHHHh-c----cC---CCeEEEEccccccc
Q 028043 153 THVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSAL-P----SS---LKRIVLVSSVGVTK 207 (214)
Q Consensus 153 d~li~~Ag~~~~~~----~~~~~~~~~~~vNv~g~~~l~~a~-~----~~---~~~iV~vSS~~~~~ 207 (214)
|+||||||...... ...++....+++|+.++.++++++ + .+ .++||++||.++..
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~ 148 (248)
T PRK06947 82 DALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRL 148 (248)
T ss_pred CEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcC
Confidence 99999999764211 122233456789999998888654 1 11 24699999987653
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.72 E-value=9e-17 Score=139.88 Aligned_cols=125 Identities=18% Similarity=0.260 Sum_probs=96.3
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC-------CCCEEEEEecCCChhccchhhhC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-------EETLQVCKGDTRNPKDLDPAIFE 150 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-------~~~~~~v~~Di~d~~~v~~~~~~ 150 (214)
..+++|+|+||||+|+||++++++|+++|++|+++.|+.+..+.+..... ..++.++.+|++|.+++.+ ++.
T Consensus 49 ~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~-~i~ 127 (367)
T PLN02686 49 ADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHE-AFD 127 (367)
T ss_pred cCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHH-HHH
Confidence 34678999999999999999999999999999999998766544322100 1257889999999999887 467
Q ss_pred CCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc--CCCeEEEEcccc
Q 028043 151 GVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS--SLKRIVLVSSVG 204 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~--~~~~iV~vSS~~ 204 (214)
++|.+||+|+....... ........++|+.++.+++++++. +++++|++||.+
T Consensus 128 ~~d~V~hlA~~~~~~~~-~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~ 182 (367)
T PLN02686 128 GCAGVFHTSAFVDPAGL-SGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLL 182 (367)
T ss_pred hccEEEecCeeeccccc-ccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHH
Confidence 89999999997642211 011134468899999999999853 689999999974
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=7.2e-17 Score=133.41 Aligned_cols=129 Identities=12% Similarity=0.049 Sum_probs=94.0
Q ss_pred CCCCCEEEEEcCch--HHHHHHHHHHHHCCCeEEEEEcC-----------hhHHHHHhcccC--CCCEEEEEecCCChhc
Q 028043 79 ASSSKLVLVAGGSG--GVGQLVVASLLSRNIKSRLLLRD-----------PEKATTLFGKQD--EETLQVCKGDTRNPKD 143 (214)
Q Consensus 79 ~~~~k~vlITGasg--gIG~~la~~L~~~G~~V~~~~r~-----------~~~~~~~~~~~~--~~~~~~v~~Di~d~~~ 143 (214)
.+++|+++||||+| |||++++++|+++|++|++++|. .+...++.+.+. +..+.++++|++|.++
T Consensus 3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~ 82 (256)
T PRK12859 3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDA 82 (256)
T ss_pred CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence 36789999999994 99999999999999999987542 222222222222 3467789999999998
Q ss_pred cchhh------hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh----c-cCCCeEEEEccccccc
Q 028043 144 LDPAI------FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 144 v~~~~------~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~----~-~~~~~iV~vSS~~~~~ 207 (214)
+++++ ++++|++|||||...... ...++.+..+++|+.|+..+.+++ + ...++||++||.++..
T Consensus 83 i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~ 160 (256)
T PRK12859 83 PKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQG 160 (256)
T ss_pred HHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCC
Confidence 88643 457999999999764221 222334556899999999887655 2 2356999999988754
|
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=7.5e-17 Score=138.07 Aligned_cols=125 Identities=22% Similarity=0.248 Sum_probs=94.2
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHH---hcccCCCCEEEEEecCCChhccchhhh-CCCcEEEec
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTL---FGKQDEETLQVCKGDTRNPKDLDPAIF-EGVTHVICC 158 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~---~~~~~~~~~~~v~~Di~d~~~v~~~~~-~~~d~li~~ 158 (214)
|+|+||||+|+||++++++|+++|++|++++|........ .....+.++.++.+|++|.+.+.+++- .++|+|||+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~ 80 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIHF 80 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEEC
Confidence 4799999999999999999999999999987643221111 111223456788999999998886432 269999999
Q ss_pred cCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEcccccccc
Q 028043 159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 159 Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~ 208 (214)
||..... ...+.....+++|+.++.+++++++ .+.++||++||.++|+.
T Consensus 81 a~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~ 130 (338)
T PRK10675 81 AGLKAVG-ESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGD 130 (338)
T ss_pred Ccccccc-chhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCC
Confidence 9976422 1223345678999999999999985 47789999999988763
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=6.2e-17 Score=135.44 Aligned_cols=120 Identities=17% Similarity=0.158 Sum_probs=94.1
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh-----hCCCcE
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI-----FEGVTH 154 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~-----~~~~d~ 154 (214)
+|+++|||| ||||++++++|+ +|++|++++|++++++++.+++. +.++.++++|++|++++++++ ++++|+
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~ 79 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTG 79 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCE
Confidence 578999998 699999999996 89999999999877766544432 335778999999999887643 357999
Q ss_pred EEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEccccccc
Q 028043 155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTK 207 (214)
Q Consensus 155 li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~ 207 (214)
||||||.... .+++...+++|+.|+.++++++.+ ..+++|++||.++..
T Consensus 80 li~nAG~~~~----~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~ 131 (275)
T PRK06940 80 LVHTAGVSPS----QASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHR 131 (275)
T ss_pred EEECCCcCCc----hhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEeccccc
Confidence 9999997531 134567889999999999997732 235788899887653
|
|
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.6e-17 Score=135.54 Aligned_cols=132 Identities=23% Similarity=0.277 Sum_probs=107.4
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------h--
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------F-- 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~-- 149 (214)
.+..+|.|+|||+.+|.|+.+|++|.++|++|++.+..++..+++..+...++...++.|++++++++++. +
T Consensus 25 ~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~ 104 (322)
T KOG1610|consen 25 DSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGE 104 (322)
T ss_pred cccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccc
Confidence 34567999999999999999999999999999999988888777766654677888999999999999854 1
Q ss_pred CCCcEEEeccCCCCC-CCCCCC---CCCchhHHHHHHHHHHHHHh----ccCCCeEEEEccccccccC
Q 028043 150 EGVTHVICCTGTTAF-PSRRWD---GDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~-~~~~~~---~~~~~~~vNv~g~~~l~~a~----~~~~~~iV~vSS~~~~~~~ 209 (214)
+++-.||||||+... ...+|. +..+.+++|+.|+..+++++ ++..+|||++||..+.-+.
T Consensus 105 ~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR~~~ 172 (322)
T KOG1610|consen 105 DGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGRVAL 172 (322)
T ss_pred ccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccCccC
Confidence 268899999997653 234443 44667799999999999887 4567899999999885443
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.1e-16 Score=140.41 Aligned_cols=123 Identities=24% Similarity=0.359 Sum_probs=95.5
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHH---hccc-CCCCEEEEEecCCChhccchhhhC---C
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTL---FGKQ-DEETLQVCKGDTRNPKDLDPAIFE---G 151 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~---~~~~-~~~~~~~v~~Di~d~~~v~~~~~~---~ 151 (214)
+.++++|+||||+|+||++++++|+++|++|++++|+.++.+.. .+.. ...+++++.+|++|++++++++-+ +
T Consensus 57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~ 136 (390)
T PLN02657 57 EPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDP 136 (390)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCC
Confidence 34678999999999999999999999999999999987643210 0000 124688999999999999875433 6
Q ss_pred CcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccccccc
Q 028043 152 VTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~ 207 (214)
+|+||||+|.... .....+++|+.++.+++++++ .+.+++|++||.+++.
T Consensus 137 ~D~Vi~~aa~~~~------~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~ 187 (390)
T PLN02657 137 VDVVVSCLASRTG------GVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQK 187 (390)
T ss_pred CcEEEECCccCCC------CCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccC
Confidence 9999999985321 122346889999999999885 5788999999998764
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=6e-17 Score=132.64 Aligned_cols=127 Identities=14% Similarity=0.066 Sum_probs=93.6
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEE-cChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCCC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLL-RDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~-r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
+|+++||||+|+||++++++|+++|++|++.. |+++..++..+.+. +..+.++.+|++|.+++++++ ++++
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL 81 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 47899999999999999999999999988876 44454444333222 345778999999999888643 3579
Q ss_pred cEEEeccCCCCCCC----CCCCCCCchhHHHHHHHHHHHHHhcc----C----CCeEEEEcccccccc
Q 028043 153 THVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSALPS----S----LKRIVLVSSVGVTKF 208 (214)
Q Consensus 153 d~li~~Ag~~~~~~----~~~~~~~~~~~vNv~g~~~l~~a~~~----~----~~~iV~vSS~~~~~~ 208 (214)
|+||||||...... ..+++....+++|+.++.++++++.+ . .++||++||.++...
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~ 149 (248)
T PRK06123 82 DALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLG 149 (248)
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCC
Confidence 99999999864211 12233456789999999998887621 1 247999999876543
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.71 E-value=9.9e-17 Score=130.68 Aligned_cols=129 Identities=22% Similarity=0.290 Sum_probs=94.9
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhH-HHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-ATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~-~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
++.+|+++||||+|+||+++++.|+++|++|+++.|+... .+...+++. +.++.++.+|++|.+++.+++ +
T Consensus 2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (248)
T PRK05557 2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEF 81 (248)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 3567899999999999999999999999999888886543 333322221 346788899999999887633 2
Q ss_pred CCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEccccccc
Q 028043 150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~ 207 (214)
+++|+|||+||...... ...+...+.+++|+.++.++++++. .+.+++|++||.++..
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~ 147 (248)
T PRK05557 82 GGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLM 147 (248)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCc
Confidence 47999999999865321 1112234556789999999988773 2456899999986543
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=1e-16 Score=130.49 Aligned_cols=129 Identities=22% Similarity=0.242 Sum_probs=96.4
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhH-HHHHhcccC--CCCEEEEEecCCChhccchhh------hC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-ATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~-~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
+++|+++||||+|+||++++++|+++|++|+++.|+... .+.+..... +.++.++.+|++|++++++.+ ++
T Consensus 4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~ 83 (249)
T PRK12825 4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFG 83 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcC
Confidence 456899999999999999999999999998887775443 333322221 346888999999999888643 25
Q ss_pred CCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
++|++||+||...... ...+.....+++|+.++.++++++ +.+.+++|++||..++..
T Consensus 84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~ 149 (249)
T PRK12825 84 RIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPG 149 (249)
T ss_pred CCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCC
Confidence 7999999999654222 122233556789999999999876 235789999999887644
|
|
| >KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.5e-17 Score=131.27 Aligned_cols=127 Identities=24% Similarity=0.257 Sum_probs=99.6
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhc---ccCCCCEEEEEecCCChhccchhh------h
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFG---KQDEETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
+++||.+++||+.||||++++++|+++|..+.+++.+.|+.+..++ ..+...+.++++|+++..++++++ |
T Consensus 2 ~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~f 81 (261)
T KOG4169|consen 2 DLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATF 81 (261)
T ss_pred cccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHh
Confidence 4679999999999999999999999999999888887777655433 333567889999999999988744 6
Q ss_pred CCCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHH----Hh-c-c--CCCeEEEEccccccccCC
Q 028043 150 EGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVS----AL-P-S--SLKRIVLVSSVGVTKFNE 210 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~----a~-~-~--~~~~iV~vSS~~~~~~~~ 210 (214)
+.+|++||+||+.. + .+++..+.+|+.|..+-+. .+ + . ..+-||++||..+..|-+
T Consensus 82 g~iDIlINgAGi~~--d---kd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p 145 (261)
T KOG4169|consen 82 GTIDILINGAGILD--D---KDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMP 145 (261)
T ss_pred CceEEEEccccccc--c---hhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccc
Confidence 78999999999875 2 2456678999888666544 33 2 2 134799999999877644
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.8e-17 Score=131.36 Aligned_cols=123 Identities=14% Similarity=0.182 Sum_probs=97.0
Q ss_pred EEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC-CCCEEEEEecCCChhccchhh--hCCCcEEEeccCCC
Q 028043 86 LVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAI--FEGVTHVICCTGTT 162 (214)
Q Consensus 86 lITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~v~~Di~d~~~v~~~~--~~~~d~li~~Ag~~ 162 (214)
+||||+||||++++++|+++|++|++++|++++.++..+.+. +.+++++.+|++|++++++++ .+++|+||||||..
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~~ 80 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAADT 80 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCCC
Confidence 699999999999999999999999999999877766544332 346788999999999998743 35689999999986
Q ss_pred CCCC---CCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEcccccccc
Q 028043 163 AFPS---RRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 163 ~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~ 208 (214)
.... ...++..+.+++|+.++.+++++.. .+.++||++||.+++.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~ 130 (230)
T PRK07041 81 PGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRP 130 (230)
T ss_pred CCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCC
Confidence 4221 1223446677999999999999553 35679999999988654
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=9.4e-17 Score=132.46 Aligned_cols=129 Identities=16% Similarity=0.162 Sum_probs=98.1
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCe-EEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
+++|+++||||+|+||++++++|+++|++ |++++|++++.+...+.+. +..+.++.+|++|++++++.+ ++
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 83 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFG 83 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 56799999999999999999999999999 9999998776654433221 345778899999999887643 35
Q ss_pred CCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc----c-C-CCeEEEEcccccccc
Q 028043 151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP----S-S-LKRIVLVSSVGVTKF 208 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~----~-~-~~~iV~vSS~~~~~~ 208 (214)
++|++|||||...... ...+.....+++|+.|+.++++++. . + .+++|++||.++++.
T Consensus 84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~ 150 (260)
T PRK06198 84 RLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGG 150 (260)
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccC
Confidence 7999999999764221 1122234567899999999988762 1 2 368999999987654
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=9.1e-17 Score=131.77 Aligned_cols=130 Identities=18% Similarity=0.183 Sum_probs=96.6
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC---CCCEEEEEecCC--Chhccchhh----
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTR--NPKDLDPAI---- 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~v~~Di~--d~~~v~~~~---- 148 (214)
..+++|+++||||+|+||.+++++|++.|++|++++|+.++.+++.+++. ..++.++.+|++ +++++++..
T Consensus 8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 87 (247)
T PRK08945 8 DLLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIE 87 (247)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHH
Confidence 34578999999999999999999999999999999999877665544332 235667788886 555544321
Q ss_pred --hCCCcEEEeccCCCCCC----CCCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEccccccc
Q 028043 149 --FEGVTHVICCTGTTAFP----SRRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 149 --~~~~d~li~~Ag~~~~~----~~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~ 207 (214)
++++|+||||||..... ....+...+.+++|+.|+.++++++. .+.++||++||..+..
T Consensus 88 ~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~ 157 (247)
T PRK08945 88 EQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQ 157 (247)
T ss_pred HHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcC
Confidence 46899999999975421 11223345667899999999988762 3567999999987653
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.71 E-value=1e-16 Score=131.61 Aligned_cols=124 Identities=17% Similarity=0.097 Sum_probs=96.6
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
+.+.+|+++||||+|+||++++++|+++|++|++++|+. ... .+..+.++++|++|++++++.+ +++
T Consensus 4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~--~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 76 (252)
T PRK08220 4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF--LTQ-----EDYPFATFVLDVSDAAAVAQVCQRLLAETGP 76 (252)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch--hhh-----cCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 446789999999999999999999999999999999987 111 1345788999999999888743 356
Q ss_pred CcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccccc
Q 028043 152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~ 208 (214)
+|+||||||...... ..+++....+++|+.++.++++++. .+.++||++||.++..+
T Consensus 77 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~ 141 (252)
T PRK08220 77 LDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVP 141 (252)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccC
Confidence 999999999864221 1223445677899999999998762 34578999999876543
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=3.3e-17 Score=138.71 Aligned_cols=109 Identities=17% Similarity=0.094 Sum_probs=86.7
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhC-CCcEEEeccCC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-GVTHVICCTGT 161 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~-~~d~li~~Ag~ 161 (214)
|+||||||+|+||++++++|+++| +|++++|... .+.+|++|.+.+++.+-+ ++|+|||+|+.
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~---------------~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~ 64 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST---------------DYCGDFSNPEGVAETVRKIRPDVIVNAAAH 64 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc---------------cccCCCCCHHHHHHHHHhcCCCEEEECCcc
Confidence 479999999999999999999999 7988887531 245899999999874322 69999999998
Q ss_pred CCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEEcccccccc
Q 028043 162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 162 ~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~vSS~~~~~~ 208 (214)
.... ....++...+.+|+.|+.+++++++....++|++||..+|+.
T Consensus 65 ~~~~-~~~~~~~~~~~~N~~~~~~l~~aa~~~g~~~v~~Ss~~Vy~~ 110 (299)
T PRK09987 65 TAVD-KAESEPEFAQLLNATSVEAIAKAANEVGAWVVHYSTDYVFPG 110 (299)
T ss_pred CCcc-hhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEccceEECC
Confidence 7632 222344556789999999999999653358999999998864
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.5e-17 Score=132.44 Aligned_cols=121 Identities=13% Similarity=0.087 Sum_probs=92.1
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCCh-hccchhhhCCCcEEEe
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP-KDLDPAIFEGVTHVIC 157 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~-~~v~~~~~~~~d~li~ 157 (214)
.+++|+++||||+||||++++++|+++|++|++++|++.... ..++.++.+|++|+ +.+.+ .++++|+|||
T Consensus 2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~-------~~~~~~~~~D~~~~~~~~~~-~~~~id~lv~ 73 (235)
T PRK06550 2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDL-------SGNFHFLQLDLSDDLEPLFD-WVPSVDILCN 73 (235)
T ss_pred CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCccccc-------CCcEEEEECChHHHHHHHHH-hhCCCCEEEE
Confidence 357899999999999999999999999999999999764311 23577899999987 33332 2578999999
Q ss_pred ccCCCCC--CC--CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEccccccc
Q 028043 158 CTGTTAF--PS--RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 158 ~Ag~~~~--~~--~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~ 207 (214)
|||.... +. ...++..+.+++|+.|+.++++++. .+.++||++||.+++.
T Consensus 74 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~ 132 (235)
T PRK06550 74 TAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFV 132 (235)
T ss_pred CCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcc
Confidence 9997531 11 1223345678999999999998762 2456899999987754
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.5e-16 Score=128.36 Aligned_cols=125 Identities=16% Similarity=0.173 Sum_probs=93.8
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh--hCCCcEEEec
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--FEGVTHVICC 158 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~--~~~~d~li~~ 158 (214)
++|+++||||+|+||++++++|+++ ++|++++|+.+..+++.+.. .+++++++|++|++++++++ ++++|+|||+
T Consensus 2 ~~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ 78 (227)
T PRK08219 2 ERPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL--PGATPFPVDLTDPEAIAAAVEQLGRLDVLVHN 78 (227)
T ss_pred CCCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh--ccceEEecCCCCHHHHHHHHHhcCCCCEEEEC
Confidence 3589999999999999999999999 99999999987766554322 35778999999999988743 2369999999
Q ss_pred cCCCCCCCCC---CCCCCchhHHHHHHHHHHHHHh----ccCCCeEEEEcccccccc
Q 028043 159 TGTTAFPSRR---WDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 159 Ag~~~~~~~~---~~~~~~~~~vNv~g~~~l~~a~----~~~~~~iV~vSS~~~~~~ 208 (214)
||........ .+...+.+++|+.+...+++++ +...+++|++||..++++
T Consensus 79 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~ 135 (227)
T PRK08219 79 AGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAHGHVVFINSGAGLRA 135 (227)
T ss_pred CCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEcchHhcCc
Confidence 9986422111 1122445688999966655543 445679999999887654
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.3e-16 Score=130.07 Aligned_cols=127 Identities=20% Similarity=0.211 Sum_probs=94.9
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChh-HHHHHhccc--CCCCEEEEEecCCChhccchhh------hCCC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-KATTLFGKQ--DEETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~~~--~~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
.|+++||||+|+||++++++|+++|++|++++|+.. ..++..... .+.++.++.+|++|++++++++ ++++
T Consensus 2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i 81 (245)
T PRK12824 2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPV 81 (245)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 368999999999999999999999999999999853 222222211 1345888999999999887643 3579
Q ss_pred cEEEeccCCCCCC---CCCCCCCCchhHHHHHHHHHHHHHh----c-cCCCeEEEEcccccccc
Q 028043 153 THVICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 153 d~li~~Ag~~~~~---~~~~~~~~~~~~vNv~g~~~l~~a~----~-~~~~~iV~vSS~~~~~~ 208 (214)
|++|||||..... ...++.....+++|+.++.++++++ + .+.++||++||..++.+
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~ 145 (245)
T PRK12824 82 DILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKG 145 (245)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccC
Confidence 9999999986421 1223344566789999999987754 2 35679999999887654
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=1e-16 Score=130.80 Aligned_cols=129 Identities=17% Similarity=0.178 Sum_probs=95.4
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC---CCCEEEEEecCCCh--hccchhh-----
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNP--KDLDPAI----- 148 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~v~~Di~d~--~~v~~~~----- 148 (214)
.+++|+++||||+||||++++++|+++|++|++++|++++.++..+++. ...+..+.+|++|. +++++..
T Consensus 3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~ 82 (239)
T PRK08703 3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAE 82 (239)
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHH
Confidence 4567999999999999999999999999999999999987766544331 23466788999763 3444321
Q ss_pred -h-CCCcEEEeccCCCCC--C--CCCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEccccccc
Q 028043 149 -F-EGVTHVICCTGTTAF--P--SRRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 149 -~-~~~d~li~~Ag~~~~--~--~~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~ 207 (214)
+ +++|+||||||.... + ...+++..+.+++|+.|+.++++++. .+.+++|++||..+..
T Consensus 83 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~ 152 (239)
T PRK08703 83 ATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGET 152 (239)
T ss_pred HhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEecccccc
Confidence 3 579999999997531 1 12223344567999999999988772 2457999999976654
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=4.3e-17 Score=133.39 Aligned_cols=124 Identities=19% Similarity=0.147 Sum_probs=92.6
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh-------h---CC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-------F---EG 151 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~-------~---~~ 151 (214)
+|+++||||+||||++++++|+++|++|++++|+.+... ... .+.++.++++|++|.+++++.+ + ++
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~--~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~ 77 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSL--AAA-AGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGAS 77 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhh--hhc-cCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCC
Confidence 358999999999999999999999999999999865321 111 1346888999999999887632 1 26
Q ss_pred CcEEEeccCCCCCCC----CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccccc
Q 028043 152 VTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~----~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~ 208 (214)
+|++|||||...... ...+...+.+++|+.|+..+++.+. .+.++||++||.+++.+
T Consensus 78 ~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~ 143 (243)
T PRK07023 78 RVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNA 143 (243)
T ss_pred ceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCC
Confidence 899999999764211 1223345667899999888777652 24579999999887654
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=99.70 E-value=8.2e-17 Score=143.24 Aligned_cols=121 Identities=17% Similarity=0.126 Sum_probs=91.1
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHH-HHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEecc
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA-TTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~A 159 (214)
++|+|+||||+|+||++++++|+++|++|++++|..... +.........+++++.+|+.++. +.++|+|||+|
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~~------l~~~D~ViHlA 191 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEPI------LLEVDQIYHLA 191 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhccCCceEEEECCccChh------hcCCCEEEEee
Confidence 568999999999999999999999999999998753221 11112222456788889987642 34699999999
Q ss_pred CCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEEcccccccc
Q 028043 160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 160 g~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~vSS~~~~~~ 208 (214)
+.... .....++.+.+++|+.|+.+++++|+....++|++||..+|+.
T Consensus 192 a~~~~-~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~r~V~~SS~~VYg~ 239 (442)
T PLN02206 192 CPASP-VHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD 239 (442)
T ss_pred eecch-hhhhcCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECChHHhCC
Confidence 97642 2222345667899999999999999653358999999999864
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=5.9e-17 Score=132.34 Aligned_cols=127 Identities=17% Similarity=0.081 Sum_probs=93.7
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEE-EcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCCC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLL-LRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~-~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
+|+++||||+|+||++++++|+++|++|+++ .|++++.++...++. +.++..+.+|++|++++++++ ++++
T Consensus 1 ~~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~i 80 (247)
T PRK09730 1 MAIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPL 80 (247)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence 3689999999999999999999999999874 677666555443322 345778999999999888643 3578
Q ss_pred cEEEeccCCCCCCC----CCCCCCCchhHHHHHHHHHHHHHhc-----c---CCCeEEEEcccccccc
Q 028043 153 THVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSALP-----S---SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 153 d~li~~Ag~~~~~~----~~~~~~~~~~~vNv~g~~~l~~a~~-----~---~~~~iV~vSS~~~~~~ 208 (214)
|+||||||...... ..+++....+++|+.++.++++++. . ..++||++||.+++.+
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~ 148 (247)
T PRK09730 81 AALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLG 148 (247)
T ss_pred CEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccC
Confidence 99999999753211 1222334667999999988887651 1 2357999999877543
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.2e-16 Score=148.91 Aligned_cols=128 Identities=18% Similarity=0.234 Sum_probs=97.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHC--CCeEEEEEcCh--hHHHHHhcccCCCCEEEEEecCCChhccchhh-hCCCcEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSR--NIKSRLLLRDP--EKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-FEGVTHV 155 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~--G~~V~~~~r~~--~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~-~~~~d~l 155 (214)
++|+||||||+|+||++++++|+++ |++|++++|.. +....+.......+++++.+|++|.+.+...+ ..++|+|
T Consensus 5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~V 84 (668)
T PLN02260 5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDTI 84 (668)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCEE
Confidence 4689999999999999999999998 68899998753 22222221112346889999999988877532 2579999
Q ss_pred EeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-C-CCeEEEEccccccccC
Q 028043 156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-LKRIVLVSSVGVTKFN 209 (214)
Q Consensus 156 i~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~-~~~iV~vSS~~~~~~~ 209 (214)
||+|+..... ..+.+....+++|+.|+.+++++++. + .+++|++||..+|+..
T Consensus 85 iHlAa~~~~~-~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~ 139 (668)
T PLN02260 85 MHFAAQTHVD-NSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGET 139 (668)
T ss_pred EECCCccCch-hhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCC
Confidence 9999986532 22334456779999999999999954 4 7899999999988753
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.2e-16 Score=130.06 Aligned_cols=125 Identities=20% Similarity=0.297 Sum_probs=92.9
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEc-ChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCCCc
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-DPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGVT 153 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r-~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~~d 153 (214)
|+++||||+|+||++++++|+++|++|+++.| +++..++...... +.++.++.+|++|++++++++ ++++|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID 80 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence 68999999999999999999999999999988 5555444332221 346888999999999887633 35799
Q ss_pred EEEeccCCCCCC---CCCCCCCCchhHHHHHHHHHHHHHh----c-cCCCeEEEEccccccc
Q 028043 154 HVICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 154 ~li~~Ag~~~~~---~~~~~~~~~~~~vNv~g~~~l~~a~----~-~~~~~iV~vSS~~~~~ 207 (214)
+||||||..... ....++....+++|+.++..+++++ + .+.++||++||..+..
T Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~ 142 (242)
T TIGR01829 81 VLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQK 142 (242)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcC
Confidence 999999976421 1222233556688999998877765 2 3567999999976543
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.1e-16 Score=132.19 Aligned_cols=125 Identities=15% Similarity=0.164 Sum_probs=90.2
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh----hHHHHHhcccC--CCCEEEEEecCCChhccchhh----
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP----EKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI---- 148 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~----~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~---- 148 (214)
.+++|+++||||+||||+++++.|+++|++|++++++. +..++..+++. +.++.++++|++|++++++.+
T Consensus 5 ~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 84 (257)
T PRK12744 5 SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAK 84 (257)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHH
Confidence 45679999999999999999999999999977776532 23333322221 346788999999999988643
Q ss_pred --hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEE-ccc
Q 028043 149 --FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLV-SSV 203 (214)
Q Consensus 149 --~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~v-SS~ 203 (214)
++++|++|||||...... ...++..+.+++|+.|+..+++++.+ ..++++++ ||.
T Consensus 85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~ 148 (257)
T PRK12744 85 AAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSL 148 (257)
T ss_pred HhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecch
Confidence 357999999999854211 22233456778999999999998743 23567766 443
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=2e-16 Score=129.17 Aligned_cols=127 Identities=13% Similarity=0.161 Sum_probs=93.8
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh-hHHHHHhcccC---CCCEEEEEecCCChhccchhh------h
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP-EKATTLFGKQD---EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~-~~~~~~~~~~~---~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
.++++++||||+|+||++++++|+++|++|++++|+. +..+++.+.+. ...+.++.+|++|.+++.+++ +
T Consensus 4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 83 (249)
T PRK09135 4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAF 83 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4568999999999999999999999999999999863 33444332221 235788999999999887643 3
Q ss_pred CCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc----cCCCeEEEEcccccc
Q 028043 150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVT 206 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~----~~~~~iV~vSS~~~~ 206 (214)
+++|+||||||...... ..+++....+++|+.|+.++++++. ...+.++++++....
T Consensus 84 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 147 (249)
T PRK09135 84 GRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAE 147 (249)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhhc
Confidence 47999999999764221 1223345677899999999999873 234578887775543
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.7e-16 Score=130.18 Aligned_cols=130 Identities=14% Similarity=0.106 Sum_probs=94.4
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcC-hhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD-PEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~-~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
.+.+++++||||+|+||++++++|+++|++|++..|+ .+...+....+. +.++..+.+|++|++++.+.+ +
T Consensus 3 ~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (252)
T PRK06077 3 SLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRY 82 (252)
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHc
Confidence 3567999999999999999999999999999887754 333333222111 235678899999999887632 3
Q ss_pred CCCcEEEeccCCCCCCCC---CCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEcccccccc
Q 028043 150 EGVTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~~---~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~~ 208 (214)
+++|+||||||....... ..+.....+++|+.|+.++++++.+ ..++||++||.+++.+
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~ 147 (252)
T PRK06077 83 GVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRP 147 (252)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCC
Confidence 579999999998543221 1112245678999999999987732 3468999999988654
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.1e-16 Score=147.22 Aligned_cols=131 Identities=16% Similarity=0.177 Sum_probs=99.0
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC----CCCEEEEEecCCChhccchhh-----
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAI----- 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~v~~Di~d~~~v~~~~----- 148 (214)
..+.+|+++||||+||||++++++|+++|++|++++|+.+.+++..+.+. ...+..+++|++|++++++++
T Consensus 410 ~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~ 489 (676)
T TIGR02632 410 KTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVAL 489 (676)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 44678999999999999999999999999999999999887765543322 235678999999999988643
Q ss_pred -hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh----cc-C-CCeEEEEcccccccc
Q 028043 149 -FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----PS-S-LKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 -~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~----~~-~-~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||...... ...++....+++|+.|++.+++++ +. + .++||++||..+..+
T Consensus 490 ~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~ 559 (676)
T TIGR02632 490 AYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYA 559 (676)
T ss_pred hcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCC
Confidence 458999999999764221 112233556789999998887654 22 2 368999999876543
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.6e-16 Score=130.16 Aligned_cols=124 Identities=17% Similarity=0.208 Sum_probs=90.6
Q ss_pred EEEEcCchHHHHHHHHHHHHCCCeEEEEEcC-hhHHHHHhcccC----CCCEEEEEecCCChhccchhh------hCCCc
Q 028043 85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRD-PEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAI------FEGVT 153 (214)
Q Consensus 85 vlITGasggIG~~la~~L~~~G~~V~~~~r~-~~~~~~~~~~~~----~~~~~~v~~Di~d~~~v~~~~------~~~~d 153 (214)
++||||+||||+++++.|+++|++|++++|+ .+.++++.+.+. ...+..+++|++|++++++++ ++++|
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 81 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS 81 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence 8999999999999999999999999999998 555555443332 123456889999999887633 46799
Q ss_pred EEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHH----HHHhc-cCCCeEEEEcccccccc
Q 028043 154 HVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNL----VSALP-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 154 ~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l----~~a~~-~~~~~iV~vSS~~~~~~ 208 (214)
+||||||...... ...++....+++|+.++..+ +++++ .+.++||++||.+++.+
T Consensus 82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~ 144 (251)
T PRK07069 82 VLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKA 144 (251)
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccC
Confidence 9999999865321 12223355678898865544 44443 35679999999987654
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.5e-16 Score=141.40 Aligned_cols=121 Identities=17% Similarity=0.120 Sum_probs=90.3
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhH-HHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEecc
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-ATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~A 159 (214)
+.|+|+||||+|+||++|+++|+++|++|++++|.... .+.........+++++.+|+.+.. +.++|+|||+|
T Consensus 119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~~------~~~~D~ViHlA 192 (436)
T PLN02166 119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEPI------LLEVDQIYHLA 192 (436)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhccCCceEEEECcccccc------ccCCCEEEECc
Confidence 35789999999999999999999999999999985321 111111112345778888887642 34699999999
Q ss_pred CCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEEcccccccc
Q 028043 160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 160 g~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~vSS~~~~~~ 208 (214)
+...... ...++...+++|+.|+.+++++|+....++|++||.++|+.
T Consensus 193 a~~~~~~-~~~~p~~~~~~Nv~gT~nLleaa~~~g~r~V~~SS~~VYg~ 240 (436)
T PLN02166 193 CPASPVH-YKYNPVKTIKTNVMGTLNMLGLAKRVGARFLLTSTSEVYGD 240 (436)
T ss_pred eeccchh-hccCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECcHHHhCC
Confidence 9764222 22345567889999999999999653358999999999874
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.69 E-value=8.7e-17 Score=135.68 Aligned_cols=119 Identities=27% Similarity=0.319 Sum_probs=94.7
Q ss_pred EEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCC-cEEEeccCCC
Q 028043 84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGV-THVICCTGTT 162 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~-d~li~~Ag~~ 162 (214)
.||||||+|+||++++++|+++|++|++++|......... .++.++.+|++|.+.+.+ ..... |+|||+|+..
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~d~~~~~~~~~-~~~~~~d~vih~aa~~ 75 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL-----SGVEFVVLDLTDRDLVDE-LAKGVPDAVIHLAAQS 75 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc-----cccceeeecccchHHHHH-HHhcCCCEEEEccccC
Confidence 4999999999999999999999999999999876544321 356789999999876665 34555 9999999988
Q ss_pred CCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CCCeEEEEcccccccc
Q 028043 163 AFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 163 ~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~~~iV~vSS~~~~~~ 208 (214)
..+.....++...+.+|+.|+.++++++++ +++++|+.||.++++.
T Consensus 76 ~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~ 122 (314)
T COG0451 76 SVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYG 122 (314)
T ss_pred chhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECC
Confidence 643322112344789999999999999965 8999999888776664
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.7e-16 Score=126.39 Aligned_cols=121 Identities=17% Similarity=0.154 Sum_probs=94.8
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh--h--CCCcEEEe
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--F--EGVTHVIC 157 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~--~--~~~d~li~ 157 (214)
+|+++||||+|+||++++++|+++|++|++++|+++..+++.. .+++++.+|++|.++++++. + +++|++||
T Consensus 1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~ 76 (222)
T PRK06953 1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQA----LGAEALALDVADPASVAGLAWKLDGEALDAAVY 76 (222)
T ss_pred CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHh----ccceEEEecCCCHHHHHHHHHHhcCCCCCEEEE
Confidence 4789999999999999999999999999999999887766542 24668999999999888632 2 25999999
Q ss_pred ccCCCCCCC-----CCCCCCCchhHHHHHHHHHHHHHhcc----CCCeEEEEcccccc
Q 028043 158 CTGTTAFPS-----RRWDGDNTPEKVDWEGVRNLVSALPS----SLKRIVLVSSVGVT 206 (214)
Q Consensus 158 ~Ag~~~~~~-----~~~~~~~~~~~vNv~g~~~l~~a~~~----~~~~iV~vSS~~~~ 206 (214)
|||...... ..+++.+..+++|+.++.++++++.+ ..+++|++||..+.
T Consensus 77 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~ 134 (222)
T PRK06953 77 VAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGS 134 (222)
T ss_pred CCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccc
Confidence 999863211 12334466789999999999987732 34679999997653
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.3e-16 Score=129.49 Aligned_cols=128 Identities=22% Similarity=0.270 Sum_probs=95.1
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhH--HHHHhccc-C-C-CCEEEEEecCCC-hhccchhh----
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK--ATTLFGKQ-D-E-ETLQVCKGDTRN-PKDLDPAI---- 148 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~--~~~~~~~~-~-~-~~~~~v~~Di~d-~~~v~~~~---- 148 (214)
++.+|+++||||++|||++++++|+++|++|+++.|+.+. .+.+.+.. . . ..+.+..+|+++ .++++..+
T Consensus 2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~ 81 (251)
T COG1028 2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAE 81 (251)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHH
Confidence 3568999999999999999999999999999888887543 22222111 1 1 356778899998 88777533
Q ss_pred --hCCCcEEEeccCCCCC--CC--CCCCCCCchhHHHHHHHHHHHHHhccCCC--eEEEEcccccc
Q 028043 149 --FEGVTHVICCTGTTAF--PS--RRWDGDNTPEKVDWEGVRNLVSALPSSLK--RIVLVSSVGVT 206 (214)
Q Consensus 149 --~~~~d~li~~Ag~~~~--~~--~~~~~~~~~~~vNv~g~~~l~~a~~~~~~--~iV~vSS~~~~ 206 (214)
++++|++|||||.... +. ...+..+..+++|+.|+..+++++.+... +||++||..+.
T Consensus 82 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~ 147 (251)
T COG1028 82 EEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL 147 (251)
T ss_pred HHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc
Confidence 5679999999998642 11 22245567789999999999885533333 99999999876
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.4e-16 Score=128.45 Aligned_cols=124 Identities=15% Similarity=0.157 Sum_probs=93.5
Q ss_pred EEEEcCchHHHHHHHHHHHHCCCeEEEEEcC-hhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCCCcEE
Q 028043 85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRD-PEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGVTHV 155 (214)
Q Consensus 85 vlITGasggIG~~la~~L~~~G~~V~~~~r~-~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~~d~l 155 (214)
++||||+||||++++++|+++|++|++++|+ .+..+++.+++. +.++.++.+|++|.+++++++ ++++|++
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l 80 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV 80 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5899999999999999999999999998875 344444433322 346888999999999887633 4578999
Q ss_pred EeccCCCCCC---CCCCCCCCchhHHHHHHHHHHHHHh-----c-cCCCeEEEEcccccccc
Q 028043 156 ICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSAL-----P-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 156 i~~Ag~~~~~---~~~~~~~~~~~~vNv~g~~~l~~a~-----~-~~~~~iV~vSS~~~~~~ 208 (214)
|||||..... ...++++...+++|+.|+.++++++ + ...++||++||.++..+
T Consensus 81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~ 142 (239)
T TIGR01831 81 VLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMG 142 (239)
T ss_pred EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccC
Confidence 9999976422 1233445667899999999998865 1 34578999999876543
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=4.9e-16 Score=127.77 Aligned_cols=122 Identities=19% Similarity=0.185 Sum_probs=93.2
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh-------hCCCcE
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-------FEGVTH 154 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~-------~~~~d~ 154 (214)
+|+++||||+|+||+++++.|+++|++|++++|++++.+.+.+ .+++.+++|++|.+++++++ .+++|.
T Consensus 2 ~k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ 77 (256)
T PRK08017 2 QKSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNS----LGFTGILLDLDDPESVERAADEVIALTDNRLYG 77 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh----CCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeE
Confidence 3689999999999999999999999999999999987766542 24678899999998876532 146899
Q ss_pred EEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHH----hc-cCCCeEEEEccccccc
Q 028043 155 VICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSA----LP-SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 155 li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a----~~-~~~~~iV~vSS~~~~~ 207 (214)
+|||||...... ..++...+.+++|+.|+.++++. ++ .+.++||++||.++..
T Consensus 78 ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~ 138 (256)
T PRK08017 78 LFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLI 138 (256)
T ss_pred EEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCccccc
Confidence 999999754211 12233456779999999887553 33 3567999999986543
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.5e-16 Score=127.00 Aligned_cols=118 Identities=15% Similarity=0.123 Sum_probs=91.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhh-----CCCcEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-----EGVTHV 155 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~-----~~~d~l 155 (214)
.+|+++||||+|+||++++++|+++|++|++++|+.+.. ...+++.+|++|.+++++.+- .++|+|
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~---------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~v 72 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD---------FPGELFACDLADIEQTAATLAQINEIHPVDAI 72 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc---------cCceEEEeeCCCHHHHHHHHHHHHHhCCCcEE
Confidence 468999999999999999999999999999999987541 112578899999998876431 268999
Q ss_pred EeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEccccccc
Q 028043 156 ICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTK 207 (214)
Q Consensus 156 i~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~ 207 (214)
|||||...... ...++....+++|+.++.++++++ +.+.++||++||.+.++
T Consensus 73 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~ 132 (234)
T PRK07577 73 VNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFG 132 (234)
T ss_pred EECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccC
Confidence 99999865321 122334556789999998888765 23567999999987654
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.67 E-value=5.4e-16 Score=144.83 Aligned_cols=131 Identities=19% Similarity=0.194 Sum_probs=102.1
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCC-CCEEEEEecCCChhccchhh------hC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDE-ETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
..+.+|+++||||+||||++++++|+++|++|++++|+.+.++...+.+.. .++.++.+|++|++++++++ ++
T Consensus 418 ~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g 497 (681)
T PRK08324 418 KPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFG 497 (681)
T ss_pred cCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 345789999999999999999999999999999999999887665544322 36788999999999887633 45
Q ss_pred CCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh----c-cCC-CeEEEEcccccccc
Q 028043 151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSL-KRIVLVSSVGVTKF 208 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~----~-~~~-~~iV~vSS~~~~~~ 208 (214)
++|+||||||...... ...+.....+++|+.|+.++++++ + .+. ++||++||..+..+
T Consensus 498 ~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~ 564 (681)
T PRK08324 498 GVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNP 564 (681)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCC
Confidence 8999999999765321 122334566789999999998866 2 233 79999999877643
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=8.8e-16 Score=119.89 Aligned_cols=129 Identities=17% Similarity=0.159 Sum_probs=90.8
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
+.+++|+++||||++|||+++++.|++.|++|++++|+.+..++..+++. +....++.+|++|.+++++.+ +
T Consensus 12 ~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~ 91 (169)
T PRK06720 12 MKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAF 91 (169)
T ss_pred cccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 44678999999999999999999999999999999998876655433332 345677899999998887632 5
Q ss_pred CCCcEEEeccCCCCCCCCCCC-CCCchhHHHHHHHHHHHHHh-----c-------cCCCeEEEEcccccc
Q 028043 150 EGVTHVICCTGTTAFPSRRWD-GDNTPEKVDWEGVRNLVSAL-----P-------SSLKRIVLVSSVGVT 206 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~~~~~-~~~~~~~vNv~g~~~l~~a~-----~-------~~~~~iV~vSS~~~~ 206 (214)
+++|++|||||........++ .......+|+.++...++.+ + ...+|+..|||.++.
T Consensus 92 G~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (169)
T PRK06720 92 SRIDMLFQNAGLYKIDSIFSRQQENDSNVLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQS 161 (169)
T ss_pred CCCCEEEECCCcCCCCCcccccchhHhhceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEecccccc
Confidence 689999999998663322222 11111244555554444432 1 134689999998764
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=5e-16 Score=126.42 Aligned_cols=126 Identities=18% Similarity=0.145 Sum_probs=96.0
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC-CCCEEEEEecCCChhccchhh------hCCC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
+++|+++||||+|+||+++++.|+++|++|++++|++++.+++.+... ..+++++++|++|++++++.+ ++++
T Consensus 3 ~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 82 (238)
T PRK05786 3 LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAI 82 (238)
T ss_pred cCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 467899999999999999999999999999999999887766533322 235788999999999887532 4568
Q ss_pred cEEEeccCCCCCCC-CCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEccccc
Q 028043 153 THVICCTGTTAFPS-RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGV 205 (214)
Q Consensus 153 d~li~~Ag~~~~~~-~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~ 205 (214)
|.+||++|...... ...+.....+++|+.++..+++.+.+ ..+++|++||..+
T Consensus 83 d~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~ 139 (238)
T PRK05786 83 DGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSG 139 (238)
T ss_pred CEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchh
Confidence 99999998653211 11223345578899999888887632 2368999999865
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=99.67 E-value=7.3e-16 Score=128.09 Aligned_cols=125 Identities=14% Similarity=0.107 Sum_probs=89.4
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcC-hhHHHHHhcccC---CCCEEEEEecCCChhccchh----------h
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD-PEKATTLFGKQD---EETLQVCKGDTRNPKDLDPA----------I 148 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~-~~~~~~~~~~~~---~~~~~~v~~Di~d~~~v~~~----------~ 148 (214)
++++||||+||||++++++|+++|++|++++|+ ++.++++.+++. +..+.++.+|++|++++.+. .
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~ 81 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA 81 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence 579999999999999999999999999998754 555555444332 23566789999999866321 1
Q ss_pred hCCCcEEEeccCCCCCCC---CCCC-----------CCCchhHHHHHHHHHHHHHhcc-----------CCCeEEEEccc
Q 028043 149 FEGVTHVICCTGTTAFPS---RRWD-----------GDNTPEKVDWEGVRNLVSALPS-----------SLKRIVLVSSV 203 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~~---~~~~-----------~~~~~~~vNv~g~~~l~~a~~~-----------~~~~iV~vSS~ 203 (214)
++++|+||||||...... ..++ ...+.+++|+.+++.+++++.+ ..++||++||.
T Consensus 82 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~ 161 (267)
T TIGR02685 82 FGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDA 161 (267)
T ss_pred cCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhh
Confidence 468999999999754211 1111 1235679999999999887521 12469999988
Q ss_pred cccc
Q 028043 204 GVTK 207 (214)
Q Consensus 204 ~~~~ 207 (214)
.+..
T Consensus 162 ~~~~ 165 (267)
T TIGR02685 162 MTDQ 165 (267)
T ss_pred hccC
Confidence 7654
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.5e-16 Score=131.98 Aligned_cols=123 Identities=20% Similarity=0.211 Sum_probs=91.3
Q ss_pred EEEEEcCchHHHHHHHHHHHHCC--CeEEEEEcCh--hHHHHHhcccCCCCEEEEEecCCChhccchhhhCC--CcEEEe
Q 028043 84 LVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDP--EKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEG--VTHVIC 157 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~G--~~V~~~~r~~--~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~--~d~li~ 157 (214)
+|+||||+|+||++++++|++.| ++|++++|.. .+.+.+.......+++++.+|++|++++.++ +.+ +|+|||
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~~~d~vi~ 79 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRL-FTEHQPDAVVH 79 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHH-HhhcCCCEEEE
Confidence 48999999999999999999987 7898887642 1112111111134678899999999999874 554 999999
Q ss_pred ccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CC-CeEEEEcccccccc
Q 028043 158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL-KRIVLVSSVGVTKF 208 (214)
Q Consensus 158 ~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~-~~iV~vSS~~~~~~ 208 (214)
+||.... ....+.....+++|+.|+.++++++++ +. .++|++||.++|+.
T Consensus 80 ~a~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~ 131 (317)
T TIGR01181 80 FAAESHV-DRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGD 131 (317)
T ss_pred cccccCc-hhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCC
Confidence 9997642 122234456789999999999998854 33 38999999988764
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.4e-16 Score=126.17 Aligned_cols=122 Identities=19% Similarity=0.194 Sum_probs=92.8
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh--h--CCCcEEEe
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--F--EGVTHVIC 157 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~--~--~~~d~li~ 157 (214)
+|+++||||+||||++++++|+++|++|++++|++++.+++.+. .++.+..+|++|++++++.. + +++|+|||
T Consensus 1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~ 77 (225)
T PRK08177 1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQAL---PGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFV 77 (225)
T ss_pred CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhc---cccceEEcCCCCHHHHHHHHHHhhcCCCCEEEE
Confidence 37899999999999999999999999999999998766554321 34677889999998887633 1 36999999
Q ss_pred ccCCCCCCC-----CCCCCCCchhHHHHHHHHHHHHHhc----cCCCeEEEEcccccc
Q 028043 158 CTGTTAFPS-----RRWDGDNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVT 206 (214)
Q Consensus 158 ~Ag~~~~~~-----~~~~~~~~~~~vNv~g~~~l~~a~~----~~~~~iV~vSS~~~~ 206 (214)
|||...... ...++....+++|+.++.++++++. .+.+.++++||..+.
T Consensus 78 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~ 135 (225)
T PRK08177 78 NAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGS 135 (225)
T ss_pred cCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCccc
Confidence 999864211 1223345567889999999998773 233689999987554
|
|
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.66 E-value=8.7e-17 Score=123.52 Aligned_cols=129 Identities=17% Similarity=0.136 Sum_probs=104.1
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh--hCCCcEEE
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--FEGVTHVI 156 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~--~~~~d~li 156 (214)
.+.|+.|++||+.-|||++++++|++.|++|+++.|+++.+..+.++.. ..++.+.+|+++.+.+.+.+ ...+|.++
T Consensus 4 ~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p-~~I~Pi~~Dls~wea~~~~l~~v~pidgLV 82 (245)
T KOG1207|consen 4 SLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETP-SLIIPIVGDLSAWEALFKLLVPVFPIDGLV 82 (245)
T ss_pred cccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCC-cceeeeEecccHHHHHHHhhcccCchhhhh
Confidence 4679999999999999999999999999999999999999998876653 34788999999998888754 23799999
Q ss_pred eccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh------ccCCCeEEEEcccccccc
Q 028043 157 CCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL------PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 157 ~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~------~~~~~~iV~vSS~~~~~~ 208 (214)
||||+....+ ...+..+..+++|+.+..++.+.. +...+.||++||.+...+
T Consensus 83 NNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~ 143 (245)
T KOG1207|consen 83 NNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRP 143 (245)
T ss_pred ccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccc
Confidence 9999865322 223455677899999988887763 223467999999988654
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=99.66 E-value=3.7e-16 Score=129.09 Aligned_cols=125 Identities=17% Similarity=0.096 Sum_probs=93.8
Q ss_pred EEEEEcCchHHHHHHHHHHHH----CCCeEEEEEcChhHHHHHhcccC----CCCEEEEEecCCChhccchhh------h
Q 028043 84 LVLVAGGSGGVGQLVVASLLS----RNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~----~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
+++||||++|||++++++|++ .|++|++++|+++.++++.+++. +..+.++.+|++|++++++++ +
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP 81 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence 689999999999999999997 79999999999988777655442 235788999999999887633 1
Q ss_pred CC----CcEEEeccCCCCCC-C--C---CCCCCCchhHHHHHHHHHHHHHh----cc--C-CCeEEEEcccccccc
Q 028043 150 EG----VTHVICCTGTTAFP-S--R---RWDGDNTPEKVDWEGVRNLVSAL----PS--S-LKRIVLVSSVGVTKF 208 (214)
Q Consensus 150 ~~----~d~li~~Ag~~~~~-~--~---~~~~~~~~~~vNv~g~~~l~~a~----~~--~-~~~iV~vSS~~~~~~ 208 (214)
+. .|+||||||..... . . +.++..+.+++|+.|+..+++++ +. + .++||++||.++..+
T Consensus 82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~ 157 (256)
T TIGR01500 82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQP 157 (256)
T ss_pred ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCC
Confidence 21 36999999975321 1 1 12334567899999998888765 22 1 358999999887543
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.66 E-value=5e-16 Score=128.32 Aligned_cols=124 Identities=20% Similarity=0.209 Sum_probs=98.8
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCC--eEEEEEcC--hhHHHHHhcccCCCCEEEEEecCCChhccchhhhC--CCcEEE
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRD--PEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVI 156 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~--~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~--~~d~li 156 (214)
|++|||||+||||++.++.++++.. +|+.++.- ..+.+.+......++..++++||.|.+.+.+. +. ++|+|+
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~-~~~~~~D~Vv 79 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRL-FKEYQPDAVV 79 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHH-HHhcCCCeEE
Confidence 5799999999999999999998765 46666652 12333333333357899999999999999984 44 699999
Q ss_pred eccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccCC--CeEEEEcccccccc
Q 028043 157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSL--KRIVLVSSVGVTKF 208 (214)
Q Consensus 157 ~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~--~~iV~vSS~~~~~~ 208 (214)
|.|+-+++ +.....+..+.++|+.||+++++++++.- -|+++||+.-+||.
T Consensus 80 hfAAESHV-DRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~ 132 (340)
T COG1088 80 HFAAESHV-DRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGD 132 (340)
T ss_pred Eechhccc-cccccChhhhhhcchHHHHHHHHHHHHhcccceEEEecccccccc
Confidence 99999984 34456777888999999999999996643 38999999999984
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.1e-15 Score=125.49 Aligned_cols=126 Identities=20% Similarity=0.235 Sum_probs=91.5
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh-hHHHHHhcccCCCCEEEEEecCCChhccchhh------hC--CC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP-EKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FE--GV 152 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~--~~ 152 (214)
+|+++||||+||||++++++|+++|++|++++|++ +.++++.+.. +.+++++++|++|++++++.+ ++ +.
T Consensus 1 ~k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~ 79 (251)
T PRK06924 1 MRYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQY-NSNLTFHSLDLQDVHELETNFNEILSSIQEDNV 79 (251)
T ss_pred CcEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhcc-CCceEEEEecCCCHHHHHHHHHHHHHhcCcccC
Confidence 37899999999999999999999999999999987 4444443322 346888999999999887632 11 12
Q ss_pred --cEEEeccCCCCCC----CCCCCCCCchhHHHHHHHHHHHHHh----cc--CCCeEEEEcccccccc
Q 028043 153 --THVICCTGTTAFP----SRRWDGDNTPEKVDWEGVRNLVSAL----PS--SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 153 --d~li~~Ag~~~~~----~~~~~~~~~~~~vNv~g~~~l~~a~----~~--~~~~iV~vSS~~~~~~ 208 (214)
+++|||||..... ...++.....+++|+.++..+++++ +. ..++||++||..+..+
T Consensus 80 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~ 147 (251)
T PRK06924 80 SSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNP 147 (251)
T ss_pred CceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCC
Confidence 2899999975421 1222334556788999988877755 22 2468999999876543
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.7e-15 Score=135.00 Aligned_cols=126 Identities=19% Similarity=0.129 Sum_probs=95.8
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh--hHHHHHhcccCCCCEEEEEecCCChhccchhh------hC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP--EKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
.+.+|+++||||+||||+++++.|+++|++|++++|.. +.++++.+++ +..++.+|++|++++++.+ ++
T Consensus 207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~---~~~~~~~Dv~~~~~~~~~~~~~~~~~g 283 (450)
T PRK08261 207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRV---GGTALALDITAPDAPARIAEHLAERHG 283 (450)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc---CCeEEEEeCCCHHHHHHHHHHHHHhCC
Confidence 45689999999999999999999999999999998843 3444443332 2457889999999887633 34
Q ss_pred CCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhcc-----CCCeEEEEccccccc
Q 028043 151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS-----SLKRIVLVSSVGVTK 207 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~-----~~~~iV~vSS~~~~~ 207 (214)
++|+||||||+..... ...+.....+++|+.|+.++.+++.+ ..++||++||.++..
T Consensus 284 ~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~ 348 (450)
T PRK08261 284 GLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIA 348 (450)
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcC
Confidence 7999999999865221 22234456778999999999998733 237899999987653
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.64 E-value=4.7e-15 Score=116.27 Aligned_cols=104 Identities=31% Similarity=0.515 Sum_probs=90.9
Q ss_pred EEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccCCCCC
Q 028043 85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAF 164 (214)
Q Consensus 85 vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag~~~~ 164 (214)
|+|+||||++|+.++++|+++|++|+++.|++++.++ ..+++++++|+.|++++.++ +.++|+||+++|....
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~------~~~~~~~~~d~~d~~~~~~a-l~~~d~vi~~~~~~~~ 73 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED------SPGVEIIQGDLFDPDSVKAA-LKGADAVIHAAGPPPK 73 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH------CTTEEEEESCTTCHHHHHHH-HTTSSEEEECCHSTTT
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc------ccccccceeeehhhhhhhhh-hhhcchhhhhhhhhcc
Confidence 7999999999999999999999999999999998776 46799999999999999974 7899999999985431
Q ss_pred CCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccccccccC
Q 028043 165 PSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 165 ~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~~ 209 (214)
+...+.+++++++ .+.+++|++||.+.+...
T Consensus 74 --------------~~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~ 105 (183)
T PF13460_consen 74 --------------DVDAAKNIIEAAKKAGVKRVVYLSSAGVYRDP 105 (183)
T ss_dssp --------------HHHHHHHHHHHHHHTTSSEEEEEEETTGTTTC
T ss_pred --------------cccccccccccccccccccceeeeccccCCCC
Confidence 2677889999884 588999999999987743
|
... |
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.7e-15 Score=122.96 Aligned_cols=123 Identities=20% Similarity=0.211 Sum_probs=91.5
Q ss_pred EEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh-hHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCCCcEE
Q 028043 85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP-EKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGVTHV 155 (214)
Q Consensus 85 vlITGasggIG~~la~~L~~~G~~V~~~~r~~-~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~~d~l 155 (214)
++|||++|+||++++++|+++|++|++++|+. +..++..+.+. +..+.++.+|++|++++++.+ ++++|+|
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL 80 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 58999999999999999999999999999875 33333322222 335788999999999887643 3578999
Q ss_pred EeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEccccccc
Q 028043 156 ICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 156 i~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~ 207 (214)
||+||...... ...+.....+++|+.++.++++++. .+.+++|++||.+++.
T Consensus 81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~ 140 (239)
T TIGR01830 81 VNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLM 140 (239)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccC
Confidence 99999864211 1112345567899999999998773 3457999999986543
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.6e-15 Score=120.67 Aligned_cols=109 Identities=23% Similarity=0.220 Sum_probs=86.1
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh--hCCCcEEEeccC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--FEGVTHVICCTG 160 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~--~~~~d~li~~Ag 160 (214)
|+++||||+||||++++++|+++ ++|++++|++. .+++|++|++++++.+ ++++|+||||||
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~---------------~~~~D~~~~~~~~~~~~~~~~id~lv~~ag 64 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG---------------DVQVDITDPASIRALFEKVGKVDAVVSAAG 64 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC---------------ceEecCCChHHHHHHHHhcCCCCEEEECCC
Confidence 47999999999999999999999 99999998753 3679999999988743 358999999999
Q ss_pred CCCCCC---CCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEccccccc
Q 028043 161 TTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTK 207 (214)
Q Consensus 161 ~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~ 207 (214)
...... ..+++..+.+++|+.|+.++++++.+ ..++|+++||..+..
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~ 117 (199)
T PRK07578 65 KVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDE 117 (199)
T ss_pred CCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCC
Confidence 754321 12234456678999999999997732 346899999987754
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.8e-15 Score=126.93 Aligned_cols=124 Identities=21% Similarity=0.248 Sum_probs=92.5
Q ss_pred EEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC-CCCEEEEEecCCChhccchhhh-CCCcEEEeccCC
Q 028043 84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAIF-EGVTHVICCTGT 161 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~v~~Di~d~~~v~~~~~-~~~d~li~~Ag~ 161 (214)
+|+||||+|+||++++++|+++|++|++++|......+...... ..+++.+.+|++|.+++++++- .++|+|||+||.
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ag~ 80 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFAGL 80 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEECccc
Confidence 48999999999999999999999999988764322111111111 1257788999999999887432 379999999997
Q ss_pred CCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEcccccccc
Q 028043 162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 162 ~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~ 208 (214)
.... ....+....++.|+.++.+++++++ .+.+++|++||.+.|+.
T Consensus 81 ~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~ 127 (328)
T TIGR01179 81 IAVG-ESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGE 127 (328)
T ss_pred cCcc-hhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCC
Confidence 6432 2223445567899999999999884 46789999999888764
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.5e-15 Score=126.45 Aligned_cols=130 Identities=15% Similarity=0.137 Sum_probs=99.4
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC---CCCEEEEEecCCChhccchhh---hC--C
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAI---FE--G 151 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~v~~Di~d~~~v~~~~---~~--~ 151 (214)
..|+-++|||||.|||++.+++|+++|.+|++++|++++++.+++++. ...+.++..|.++.+.+-+.+ +. .
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~ 126 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLD 126 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCc
Confidence 346899999999999999999999999999999999999999877765 345778999999877522222 23 4
Q ss_pred CcEEEeccCCCCC-CC----CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEccccccccC
Q 028043 152 VTHVICCTGTTAF-PS----RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 152 ~d~li~~Ag~~~~-~~----~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~~ 209 (214)
+-+||||+|.... |. ...........+|+.++..+++... .+.+-||++||.++..+.
T Consensus 127 VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~ 194 (312)
T KOG1014|consen 127 VGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPT 194 (312)
T ss_pred eEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccC
Confidence 6689999999862 21 1111335566889999888888663 345689999999886543
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.63 E-value=5.3e-16 Score=125.73 Aligned_cols=120 Identities=21% Similarity=0.325 Sum_probs=95.3
Q ss_pred EEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhC--CCcEEEeccCCC
Q 028043 85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVICCTGTT 162 (214)
Q Consensus 85 vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~--~~d~li~~Ag~~ 162 (214)
|+||||+|+||++++++|+++|+.|+.+.|+......... ..+++++.+|+.|.+.+++. +. ++|+|||+||..
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~---~~~~~~~~~dl~~~~~~~~~-~~~~~~d~vi~~a~~~ 76 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEK---KLNVEFVIGDLTDKEQLEKL-LEKANIDVVIHLAAFS 76 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHH---HTTEEEEESETTSHHHHHHH-HHHHTESEEEEEBSSS
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccc---cceEEEEEeecccccccccc-ccccCceEEEEeeccc
Confidence 7999999999999999999999999988887654332211 12688999999999999874 43 579999999976
Q ss_pred CCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccccccccC
Q 028043 163 AFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 163 ~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~~ 209 (214)
.. ...+......++.|+.++.+++++++ .+.+++|++||..+|+..
T Consensus 77 ~~-~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~ 123 (236)
T PF01370_consen 77 SN-PESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDP 123 (236)
T ss_dssp SH-HHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSS
T ss_pred cc-ccccccccccccccccccccccccccccccccccccccccccccc
Confidence 31 11123455677899999999999995 567899999999998865
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.6e-15 Score=130.25 Aligned_cols=126 Identities=25% Similarity=0.374 Sum_probs=98.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCC--CeEEEEEcChhH--HHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEK--ATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G--~~V~~~~r~~~~--~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li 156 (214)
++.+++||||+|++|++++++|++++ .+|.++|..+.. ............++++.+|+.|...+.++ +.++ .|+
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a-~~~~-~Vv 80 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNA-FQGA-VVV 80 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhh-ccCc-eEE
Confidence 46799999999999999999999998 789999987642 11111111256788999999999999975 7788 777
Q ss_pred eccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccccccccC
Q 028043 157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 157 ~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~~ 209 (214)
|+|+... +.....+.+..+++|+.||.+++++|+ .+++++||+||..+..++
T Consensus 81 h~aa~~~-~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g 133 (361)
T KOG1430|consen 81 HCAASPV-PDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGG 133 (361)
T ss_pred EeccccC-ccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCC
Confidence 7777654 222223456678999999999999995 599999999999987654
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=4.2e-15 Score=137.98 Aligned_cols=120 Identities=22% Similarity=0.325 Sum_probs=91.6
Q ss_pred CEEEEEcCchHHHHHHHHHHH--HCCCeEEEEEcChhH--HHHHhcccCCCCEEEEEecCCChh------ccchhhhCCC
Q 028043 83 KLVLVAGGSGGVGQLVVASLL--SRNIKSRLLLRDPEK--ATTLFGKQDEETLQVCKGDTRNPK------DLDPAIFEGV 152 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~--~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~v~~Di~d~~------~v~~~~~~~~ 152 (214)
|+|+||||+|+||++++++|+ +.|++|++++|+... .+.+.......+++++.+|++|++ .+++ +.++
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~--l~~~ 78 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAE--LGDI 78 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHH--hcCC
Confidence 479999999999999999999 589999999996532 222222222256889999999853 3332 2789
Q ss_pred cEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CCCeEEEEcccccccc
Q 028043 153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 153 d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~~~iV~vSS~~~~~~ 208 (214)
|+|||+||..... .......++|+.|+.+++++++. +.+++|++||.++++.
T Consensus 79 D~Vih~Aa~~~~~----~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~ 131 (657)
T PRK07201 79 DHVVHLAAIYDLT----ADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGD 131 (657)
T ss_pred CEEEECceeecCC----CCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccC
Confidence 9999999975421 12344668999999999999854 6889999999998864
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.5e-15 Score=127.14 Aligned_cols=117 Identities=13% Similarity=0.073 Sum_probs=86.2
Q ss_pred EEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhh---CCCcEEEeccC
Q 028043 85 VLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF---EGVTHVICCTG 160 (214)
Q Consensus 85 vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~---~~~d~li~~Ag 160 (214)
|+||||+|+||++++++|+++|+ +|++++|..... .+.+ . ....+..|+.+.+.++.... .++|+|||+||
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~~~-~---~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~ 75 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KFLN-L---ADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQGA 75 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hhhh-h---hheeeeccCcchhHHHHHHhhccCCCCEEEECcc
Confidence 68999999999999999999998 688887654321 1110 1 11346688888877765322 58999999999
Q ss_pred CCCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEEccccccccC
Q 028043 161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 161 ~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~vSS~~~~~~~ 209 (214)
..... ..+....+++|+.|+.++++++++...++|++||.++|+..
T Consensus 76 ~~~~~---~~~~~~~~~~n~~~~~~ll~~~~~~~~~~v~~SS~~vy~~~ 121 (314)
T TIGR02197 76 CSDTT---ETDGEYMMENNYQYSKRLLDWCAEKGIPFIYASSAATYGDG 121 (314)
T ss_pred ccCcc---ccchHHHHHHHHHHHHHHHHHHHHhCCcEEEEccHHhcCCC
Confidence 75421 23445677999999999999985533489999999988743
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.5e-15 Score=114.77 Aligned_cols=124 Identities=23% Similarity=0.176 Sum_probs=91.5
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHh---ccc--CCCCEEEEEecCCChhccchhh------hC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLF---GKQ--DEETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~---~~~--~~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
|+++||||+|+||++++++|+++|+ .|++++|+++..+... +.+ .+.++.++.+|+++++++++.+ ++
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG 80 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 5799999999999999999999997 5888888754322111 111 1346778899999998877632 35
Q ss_pred CCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhcc-CCCeEEEEcccccc
Q 028043 151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVT 206 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~-~~~~iV~vSS~~~~ 206 (214)
++|.|||+||...... ...++....+++|+.++.+++++++. +.+++|++||..+.
T Consensus 81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~ 140 (180)
T smart00822 81 PLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGV 140 (180)
T ss_pred CeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHh
Confidence 6899999999764221 12233456678999999999998854 56899999998664
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=4.3e-15 Score=120.86 Aligned_cols=117 Identities=18% Similarity=0.220 Sum_probs=84.8
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCC--CeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh--hCCCcEEEec
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--FEGVTHVICC 158 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~--~~~~d~li~~ 158 (214)
|+++||||+||||++++++|+++| +.|++..|+.... ....++.++++|++|.+++++.. ++++|+||||
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~------~~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li~~ 74 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD------FQHDNVQWHALDVTDEAEIKQLSEQFTQLDWLINC 74 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc------cccCceEEEEecCCCHHHHHHHHHhcCCCCEEEEC
Confidence 589999999999999999999985 5666666654321 12356788999999999877632 5689999999
Q ss_pred cCCCCCC----CC-----CCCCCCchhHHHHHHHHHHHHHhcc-----CCCeEEEEccccc
Q 028043 159 TGTTAFP----SR-----RWDGDNTPEKVDWEGVRNLVSALPS-----SLKRIVLVSSVGV 205 (214)
Q Consensus 159 Ag~~~~~----~~-----~~~~~~~~~~vNv~g~~~l~~a~~~-----~~~~iV~vSS~~~ 205 (214)
||..... .. +.+.....+++|+.++..+++++.+ +.++++++||..+
T Consensus 75 aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~ 135 (235)
T PRK09009 75 VGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVG 135 (235)
T ss_pred CccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeeccc
Confidence 9987421 11 1112235678999999998887622 3468999987543
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=99.60 E-value=3.9e-15 Score=124.62 Aligned_cols=104 Identities=19% Similarity=0.172 Sum_probs=84.0
Q ss_pred EEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhC--CCcEEEeccCC
Q 028043 84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVICCTGT 161 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~--~~d~li~~Ag~ 161 (214)
+|+||||+|+||++++++|+++|++|++++|+ .+|+.|.++++++ +. ++|+|||+||.
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~-------------------~~d~~~~~~~~~~-~~~~~~d~vi~~a~~ 60 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSS-------------------QLDLTDPEALERL-LRAIRPDAVVNTAAY 60 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc-------------------ccCCCCHHHHHHH-HHhCCCCEEEECCcc
Confidence 48999999999999999999999999999885 3789999998875 44 46999999997
Q ss_pred CCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEEcccccccc
Q 028043 162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 162 ~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~vSS~~~~~~ 208 (214)
..... ........+++|+.++.+++++++....++|++||.++|+.
T Consensus 61 ~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~ 106 (287)
T TIGR01214 61 TDVDG-AESDPEKAFAVNALAPQNLARAAARHGARLVHISTDYVFDG 106 (287)
T ss_pred ccccc-cccCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEeeeeeecC
Confidence 64221 12234456789999999999998653358999999988764
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=99.58 E-value=3.6e-15 Score=125.66 Aligned_cols=104 Identities=18% Similarity=0.156 Sum_probs=83.0
Q ss_pred EEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhC--CCcEEEeccCCCC
Q 028043 86 LVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVICCTGTTA 163 (214)
Q Consensus 86 lITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~--~~d~li~~Ag~~~ 163 (214)
|||||+|+||++++++|++.|++|+++.+. ..+|++|.+++++. +. ++|+|||+|+...
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~------------------~~~Dl~~~~~l~~~-~~~~~~d~Vih~A~~~~ 61 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH------------------KELDLTRQADVEAF-FAKEKPTYVILAAAKVG 61 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeecc------------------ccCCCCCHHHHHHH-HhccCCCEEEEeeeeec
Confidence 699999999999999999999998766432 14899999988874 33 5899999999754
Q ss_pred CCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEcccccccc
Q 028043 164 FPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 164 ~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~ 208 (214)
.......++...+++|+.++.+++++++ .+.+++|++||..+|+.
T Consensus 62 ~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~ 107 (306)
T PLN02725 62 GIHANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPK 107 (306)
T ss_pred ccchhhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCC
Confidence 2222223455678899999999999995 46789999999998874
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.3e-14 Score=124.51 Aligned_cols=120 Identities=20% Similarity=0.309 Sum_probs=88.9
Q ss_pred EEEEEcCchHHHHHHHHHHHHCC--CeEEEEEcChhHH------HHHhcccC------C-CCEEEEEecCCChh------
Q 028043 84 LVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKA------TTLFGKQD------E-ETLQVCKGDTRNPK------ 142 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~G--~~V~~~~r~~~~~------~~~~~~~~------~-~~~~~v~~Di~d~~------ 142 (214)
+|+||||||+||++++++|+++| ++|+++.|+.+.. ++..+... . .+++++.+|++++.
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 48999999999999999999999 6799999976522 11111110 1 46889999998653
Q ss_pred ccchhhhCCCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEcccccccc
Q 028043 143 DLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 143 ~v~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~ 208 (214)
.... +.+++|+||||||..... .......++|+.|+.++++++. .+.+++|++||.++++.
T Consensus 81 ~~~~-~~~~~d~vih~a~~~~~~----~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~ 142 (367)
T TIGR01746 81 EWER-LAENVDTIVHNGALVNWV----YPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAA 142 (367)
T ss_pred HHHH-HHhhCCEEEeCCcEeccC----CcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCC
Confidence 2332 356899999999976421 2234456799999999999885 45677999999998865
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=6e-15 Score=124.94 Aligned_cols=114 Identities=15% Similarity=0.236 Sum_probs=79.0
Q ss_pred EEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccc---hhhh-----CCCcEEE
Q 028043 85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLD---PAIF-----EGVTHVI 156 (214)
Q Consensus 85 vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~---~~~~-----~~~d~li 156 (214)
|+||||+|+||++++++|+++|++++++.|+........ ....+|+.|..+.+ +.++ +++|+||
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~~--------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vi 73 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFV--------NLVDLDIADYMDKEDFLAQIMAGDDFGDIEAIF 73 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHHH--------hhhhhhhhhhhhHHHHHHHHhcccccCCccEEE
Confidence 899999999999999999999998777666543221110 11234555443322 2222 3699999
Q ss_pred eccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEEccccccccC
Q 028043 157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 157 ~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~vSS~~~~~~~ 209 (214)
|+||..... .+ +....+++|+.++.+++++++....++|++||.++|+..
T Consensus 74 h~A~~~~~~--~~-~~~~~~~~n~~~t~~ll~~~~~~~~~~i~~SS~~vyg~~ 123 (308)
T PRK11150 74 HEGACSSTT--EW-DGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGR 123 (308)
T ss_pred ECceecCCc--CC-ChHHHHHHHHHHHHHHHHHHHHcCCcEEEEcchHHhCcC
Confidence 999965422 22 234467999999999999996533479999999998753
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=5e-15 Score=125.59 Aligned_cols=129 Identities=11% Similarity=0.103 Sum_probs=84.1
Q ss_pred CCCCCCEEEEEcCc--hHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhc------------ccCCC-----CEEEEEecC
Q 028043 78 PASSSKLVLVAGGS--GGVGQLVVASLLSRNIKSRLLLRDPEKATTLFG------------KQDEE-----TLQVCKGDT 138 (214)
Q Consensus 78 ~~~~~k~vlITGas--ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~------------~~~~~-----~~~~v~~Di 138 (214)
..+++|+++||||+ +|||+++|++|+++|++|++.++.+ .++.... ...+. .+..+.+|+
T Consensus 4 ~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~ 82 (299)
T PRK06300 4 IDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASF 82 (299)
T ss_pred cCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhhhc
Confidence 34678999999995 9999999999999999999987542 0110000 00000 011123344
Q ss_pred CChhc------------------cchhh------hCCCcEEEeccCCCCC---C--CCCCCCCCchhHHHHHHHHHHHHH
Q 028043 139 RNPKD------------------LDPAI------FEGVTHVICCTGTTAF---P--SRRWDGDNTPEKVDWEGVRNLVSA 189 (214)
Q Consensus 139 ~d~~~------------------v~~~~------~~~~d~li~~Ag~~~~---~--~~~~~~~~~~~~vNv~g~~~l~~a 189 (214)
++.++ +++.+ ++++|+||||||.... + ..+++++.+.+++|+.|+++++++
T Consensus 83 ~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a 162 (299)
T PRK06300 83 DTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSH 162 (299)
T ss_pred CCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence 44432 23211 5789999999986431 1 133445577789999999999997
Q ss_pred hcc---CCCeEEEEccccccc
Q 028043 190 LPS---SLKRIVLVSSVGVTK 207 (214)
Q Consensus 190 ~~~---~~~~iV~vSS~~~~~ 207 (214)
+.+ ..++||++||.++..
T Consensus 163 ~~p~m~~~G~ii~iss~~~~~ 183 (299)
T PRK06300 163 FGPIMNPGGSTISLTYLASMR 183 (299)
T ss_pred HHHHhhcCCeEEEEeehhhcC
Confidence 732 236899999987654
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=2e-14 Score=135.63 Aligned_cols=103 Identities=22% Similarity=0.340 Sum_probs=86.7
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccCCC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT 162 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag~~ 162 (214)
|+|+||||+|+||++++++|+++|++|++++|+.... . ..++.++.+|++|.+++.+ ++.++|+|||+|+..
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~--~-----~~~v~~v~gDL~D~~~l~~-al~~vD~VVHlAa~~ 72 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS--W-----PSSADFIAADIRDATAVES-AMTGADVVAHCAWVR 72 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh--c-----ccCceEEEeeCCCHHHHHH-HHhCCCEEEECCCcc
Confidence 4799999999999999999999999999999975321 1 2357789999999999986 467899999999864
Q ss_pred CCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccc
Q 028043 163 AFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSV 203 (214)
Q Consensus 163 ~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~ 203 (214)
.. .+++|+.|+.+++++++ .+.++||++||.
T Consensus 73 ~~----------~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~ 104 (854)
T PRK05865 73 GR----------NDHINIDGTANVLKAMAETGTGRIVFTSSG 104 (854)
T ss_pred cc----------hHHHHHHHHHHHHHHHHHcCCCeEEEECCc
Confidence 21 36899999999999985 477899999996
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.57 E-value=9.7e-15 Score=131.58 Aligned_cols=124 Identities=22% Similarity=0.296 Sum_probs=92.4
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC---eEEEEEcChh------HHH-HHhc---------ccC-------CCCEEE
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI---KSRLLLRDPE------KAT-TLFG---------KQD-------EETLQV 133 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~---~V~~~~r~~~------~~~-~~~~---------~~~-------~~~~~~ 133 (214)
.++|+|+||||||+||++++++|++.+. +|+++.|... ++. ++.. ... ..++++
T Consensus 9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~ 88 (491)
T PLN02996 9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP 88 (491)
T ss_pred hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence 4679999999999999999999998653 5888888642 111 1110 000 156889
Q ss_pred EEecCCCh-------hccchhhhCCCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc--CCCeEEEEcccc
Q 028043 134 CKGDTRNP-------KDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS--SLKRIVLVSSVG 204 (214)
Q Consensus 134 v~~Di~d~-------~~v~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~--~~~~iV~vSS~~ 204 (214)
+.+|++++ +.++. +..++|+|||+|+...+. .+.....++|+.|+.+++++++. +.+++|++||..
T Consensus 89 i~GDl~~~~LGLs~~~~~~~-l~~~vD~ViH~AA~v~~~----~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~ 163 (491)
T PLN02996 89 VPGDISYDDLGVKDSNLREE-MWKEIDIVVNLAATTNFD----ERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAY 163 (491)
T ss_pred EecccCCcCCCCChHHHHHH-HHhCCCEEEECccccCCc----CCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeE
Confidence 99999843 33443 457899999999976531 34556789999999999998853 578999999999
Q ss_pred cccc
Q 028043 205 VTKF 208 (214)
Q Consensus 205 ~~~~ 208 (214)
+|+.
T Consensus 164 vyG~ 167 (491)
T PLN02996 164 VCGE 167 (491)
T ss_pred EecC
Confidence 9875
|
|
| >KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.6e-14 Score=114.08 Aligned_cols=126 Identities=21% Similarity=0.256 Sum_probs=90.9
Q ss_pred CCEEEEEcCchHHHHHHHHHHHH-CCCeEEE-EEcChhHHHHHhcc--cCCCCEEEEEecCCChhccchhh--------h
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLS-RNIKSRL-LLRDPEKATTLFGK--QDEETLQVCKGDTRNPKDLDPAI--------F 149 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~-~G~~V~~-~~r~~~~~~~~~~~--~~~~~~~~v~~Di~d~~~v~~~~--------~ 149 (214)
.|.++||||++|||..++++|.+ .|.++++ .+|+++.+.+..+. ....++++++.|+++.+++..++ .
T Consensus 3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~ 82 (249)
T KOG1611|consen 3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGS 82 (249)
T ss_pred CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhccc
Confidence 46799999999999999999997 4777655 56668874332222 23678999999999999888743 3
Q ss_pred CCCcEEEeccCCCCCCCCCC----CCCCchhHHHHHHHHHHHHHh----c-cC-----------CCeEEEEccccccc
Q 028043 150 EGVTHVICCTGTTAFPSRRW----DGDNTPEKVDWEGVRNLVSAL----P-SS-----------LKRIVLVSSVGVTK 207 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~~~~----~~~~~~~~vNv~g~~~l~~a~----~-~~-----------~~~iV~vSS~~~~~ 207 (214)
+++|+++||||+...-.... ....+.+++|..|+.++.+++ + .. ...||++||.++..
T Consensus 83 ~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~ 160 (249)
T KOG1611|consen 83 DGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSI 160 (249)
T ss_pred CCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeecccccc
Confidence 47999999999876211111 123556799999998888766 1 11 12699999987753
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.56 E-value=2e-14 Score=121.84 Aligned_cols=103 Identities=18% Similarity=0.161 Sum_probs=74.6
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhh-CCCcEEEeccC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-EGVTHVICCTG 160 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~-~~~d~li~~Ag 160 (214)
.|+||||||+|+||++++++|+++|++|+... .|+.|.+.+...+- .++|+|||+||
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~----------------------~~~~~~~~v~~~l~~~~~D~ViH~Aa 66 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS----------------------GRLENRASLEADIDAVKPTHVFNAAG 66 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCEEEEec----------------------CccCCHHHHHHHHHhcCCCEEEECCc
Confidence 47899999999999999999999999987532 22334444443221 26899999999
Q ss_pred CCCCCCCC--CCCCCchhHHHHHHHHHHHHHhcc-CCCeEEEEccccccc
Q 028043 161 TTAFPSRR--WDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTK 207 (214)
Q Consensus 161 ~~~~~~~~--~~~~~~~~~vNv~g~~~l~~a~~~-~~~~iV~vSS~~~~~ 207 (214)
....+... ..++...+++|+.|+.+++++++. +.+ .+++||..+|+
T Consensus 67 ~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~-~v~~sS~~vy~ 115 (298)
T PLN02778 67 VTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGLV-LTNYATGCIFE 115 (298)
T ss_pred ccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC-EEEEecceEeC
Confidence 87633222 245566789999999999999954 555 55667666654
|
|
| >KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.4e-14 Score=119.30 Aligned_cols=125 Identities=20% Similarity=0.245 Sum_probs=99.9
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC----CCCEEEEEecCCChhccchhh------hCCC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
.+|+|||++.|||.+++.++..+|++|.++.|+..++.++++.++ ...+.+..+|+.|.+++...+ .+.+
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~ 113 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI 113 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence 689999999999999999999999999999999999988877665 123668889999998887643 3579
Q ss_pred cEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh----cc--CCCeEEEEccccccc
Q 028043 153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----PS--SLKRIVLVSSVGVTK 207 (214)
Q Consensus 153 d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~----~~--~~~~iV~vSS~~~~~ 207 (214)
|.+|||||...... .+.+..+..+++|+.|+.+++++. +. +.++|+.+||..+..
T Consensus 114 d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~ 177 (331)
T KOG1210|consen 114 DNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAML 177 (331)
T ss_pred ceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhc
Confidence 99999999876322 222334667799999999999865 21 345999999987753
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.5e-15 Score=127.97 Aligned_cols=111 Identities=19% Similarity=0.221 Sum_probs=81.7
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhC-CCcEEEeccCC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-GVTHVICCTGT 161 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~-~~d~li~~Ag~ 161 (214)
|+||||||+|.||+++.++|.++|++|+.+.|+ ..|++|.+.+++.+-. ++|+|||+||+
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~-------------------~~dl~d~~~~~~~~~~~~pd~Vin~aa~ 61 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGYEVIATSRS-------------------DLDLTDPEAVAKLLEAFKPDVVINCAAY 61 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT-------------------CS-TTSHHHHHHHHHHH--SEEEE----
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch-------------------hcCCCCHHHHHHHHHHhCCCeEecccee
Confidence 689999999999999999999999999999876 4789999988874322 69999999998
Q ss_pred CCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEEccccccccC-CCCC
Q 028043 162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFN-ELPW 213 (214)
Q Consensus 162 ~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~vSS~~~~~~~-~~p~ 213 (214)
..+.. ...++...+.+|+.++.+++++++....++|++||..++... ..||
T Consensus 62 ~~~~~-ce~~p~~a~~iN~~~~~~la~~~~~~~~~li~~STd~VFdG~~~~~y 113 (286)
T PF04321_consen 62 TNVDA-CEKNPEEAYAINVDATKNLAEACKERGARLIHISTDYVFDGDKGGPY 113 (286)
T ss_dssp --HHH-HHHSHHHHHHHHTHHHHHHHHHHHHCT-EEEEEEEGGGS-SSTSSSB
T ss_pred ecHHh-hhhChhhhHHHhhHHHHHHHHHHHHcCCcEEEeeccEEEcCCccccc
Confidence 75321 113456678999999999999997766799999999998644 3444
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=99.54 E-value=4.4e-14 Score=129.37 Aligned_cols=126 Identities=22% Similarity=0.284 Sum_probs=93.1
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC---eEEEEEcChhH---HHHHhcc-------------cC-------CCCEEE
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI---KSRLLLRDPEK---ATTLFGK-------------QD-------EETLQV 133 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~---~V~~~~r~~~~---~~~~~~~-------------~~-------~~~~~~ 133 (214)
.++|+|+||||||+||++++++|++.+. +|+++.|.... .+.+.++ .. ..++.+
T Consensus 117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~ 196 (605)
T PLN02503 117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP 196 (605)
T ss_pred hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence 4689999999999999999999998764 68899885321 1111100 00 236888
Q ss_pred EEecCCChh-----ccchhhhCCCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc--CCCeEEEEcccccc
Q 028043 134 CKGDTRNPK-----DLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS--SLKRIVLVSSVGVT 206 (214)
Q Consensus 134 v~~Di~d~~-----~v~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~--~~~~iV~vSS~~~~ 206 (214)
+.+|+++++ +..+.+..++|+|||+|+...+. ++.....++|+.|+.+++++++. ..+++|++||..+|
T Consensus 197 v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~----~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVy 272 (605)
T PLN02503 197 VVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFD----ERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVN 272 (605)
T ss_pred EEeeCCCcccCCCHHHHHHHHhcCCEEEECccccccc----cCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceee
Confidence 999999873 22223456799999999986531 34556789999999999998843 46789999999998
Q ss_pred ccC
Q 028043 207 KFN 209 (214)
Q Consensus 207 ~~~ 209 (214)
+..
T Consensus 273 G~~ 275 (605)
T PLN02503 273 GQR 275 (605)
T ss_pred cCC
Confidence 764
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.54 E-value=5e-14 Score=116.31 Aligned_cols=115 Identities=24% Similarity=0.365 Sum_probs=73.7
Q ss_pred EEcCchHHHHHHHHHHHHCCC--eEEEEEcChhH---HHHHhccc------------CCCCEEEEEecCCChh------c
Q 028043 87 VAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEK---ATTLFGKQ------------DEETLQVCKGDTRNPK------D 143 (214)
Q Consensus 87 ITGasggIG~~la~~L~~~G~--~V~~~~r~~~~---~~~~~~~~------------~~~~~~~v~~Di~d~~------~ 143 (214)
||||||++|+++.++|++.+. +|+++.|..+. .+.+.+.+ ...+++++.+|++++. .
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 799999999999999999876 89999997532 22222111 1468999999999864 2
Q ss_pred cchhhhCCCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEcccccc
Q 028043 144 LDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVT 206 (214)
Q Consensus 144 v~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~ 206 (214)
.+. +...+|+|||||+...+. ....+..++|+.|+.++++.+. ...++++|+||..+.
T Consensus 81 ~~~-L~~~v~~IiH~Aa~v~~~----~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~ 139 (249)
T PF07993_consen 81 YQE-LAEEVDVIIHCAASVNFN----APYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVA 139 (249)
T ss_dssp HHH-HHHH--EEEE--SS-SBS-----S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGT
T ss_pred hhc-cccccceeeecchhhhhc----ccchhhhhhHHHHHHHHHHHHHhccCcceEEecccccc
Confidence 222 245799999999977532 2445578999999999999886 455699999994443
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=99.54 E-value=3.5e-14 Score=145.94 Aligned_cols=127 Identities=20% Similarity=0.203 Sum_probs=96.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHC-CCeEEEEEcChh------------------------------------------
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPE------------------------------------------ 117 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~-G~~V~~~~r~~~------------------------------------------ 117 (214)
.++++|||||++|||.+++++|+++ |++|++++|++.
T Consensus 1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813 1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence 5799999999999999999999998 699999999820
Q ss_pred -----HHHHHhcccC--CCCEEEEEecCCChhccchhh-----hCCCcEEEeccCCCCCC---CCCCCCCCchhHHHHHH
Q 028043 118 -----KATTLFGKQD--EETLQVCKGDTRNPKDLDPAI-----FEGVTHVICCTGTTAFP---SRRWDGDNTPEKVDWEG 182 (214)
Q Consensus 118 -----~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~-----~~~~d~li~~Ag~~~~~---~~~~~~~~~~~~vNv~g 182 (214)
..++..+.+. +..+.++.+|++|.+++++++ .+++|+||||||+.... ..+.++....+++|+.|
T Consensus 2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G 2155 (2582)
T TIGR02813 2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDG 2155 (2582)
T ss_pred cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHH
Confidence 0000011111 346788999999999988743 23699999999986522 23344556788999999
Q ss_pred HHHHHHHhcc-CCCeEEEEccccccc
Q 028043 183 VRNLVSALPS-SLKRIVLVSSVGVTK 207 (214)
Q Consensus 183 ~~~l~~a~~~-~~~~iV~vSS~~~~~ 207 (214)
++++++++.. ..++||++||.+++.
T Consensus 2156 ~~~Ll~al~~~~~~~IV~~SSvag~~ 2181 (2582)
T TIGR02813 2156 LLSLLAALNAENIKLLALFSSAAGFY 2181 (2582)
T ss_pred HHHHHHHHHHhCCCeEEEEechhhcC
Confidence 9999998854 567899999998754
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.53 E-value=3.2e-14 Score=118.33 Aligned_cols=109 Identities=22% Similarity=0.198 Sum_probs=91.3
Q ss_pred EEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhC-CCcEEEeccCCC
Q 028043 84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-GVTHVICCTGTT 162 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~-~~d~li~~Ag~~ 162 (214)
++||||++|.+|.+|++.|. .+++|+.++|.. +|++|++.+.+.+-. ++|+|||+|++.
T Consensus 2 ~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~-------------------~Ditd~~~v~~~i~~~~PDvVIn~AAyt 61 (281)
T COG1091 2 KILITGANGQLGTELRRALP-GEFEVIATDRAE-------------------LDITDPDAVLEVIRETRPDVVINAAAYT 61 (281)
T ss_pred cEEEEcCCChHHHHHHHHhC-CCceEEeccCcc-------------------ccccChHHHHHHHHhhCCCEEEECcccc
Confidence 49999999999999999998 779999988755 799999999875322 699999999998
Q ss_pred CCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEEccccccccCC-CCC
Q 028043 163 AFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNE-LPW 213 (214)
Q Consensus 163 ~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~vSS~~~~~~~~-~p~ 213 (214)
.+...+ .+++..+.+|..|+.++++++..-..++|++||..++.... .||
T Consensus 62 ~vD~aE-~~~e~A~~vNa~~~~~lA~aa~~~ga~lVhiSTDyVFDG~~~~~Y 112 (281)
T COG1091 62 AVDKAE-SEPELAFAVNATGAENLARAAAEVGARLVHISTDYVFDGEKGGPY 112 (281)
T ss_pred cccccc-CCHHHHHHhHHHHHHHHHHHHHHhCCeEEEeecceEecCCCCCCC
Confidence 854433 44577889999999999999988778999999999976443 455
|
|
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.52 E-value=3.3e-14 Score=116.84 Aligned_cols=124 Identities=17% Similarity=0.180 Sum_probs=98.2
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhH-HHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEE
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-ATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVI 156 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li 156 (214)
....+++|+||||+|+||++||+.|..+|+.|+++|.--.. .+.+..-.....++.+.-|+..+ ++..+|.++
T Consensus 23 ~p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~p------l~~evD~Iy 96 (350)
T KOG1429|consen 23 KPSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEP------LLKEVDQIY 96 (350)
T ss_pred cCCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccCcceeEEEeechhH------HHHHhhhhh
Confidence 34456899999999999999999999999999999875433 23333333356777777787654 456799999
Q ss_pred eccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEEcccccccc
Q 028043 157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 157 ~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~vSS~~~~~~ 208 (214)
|.|+... |.....++.+.+..|+.|+.+++..+++-.+|+++.||..+|+.
T Consensus 97 hLAapas-p~~y~~npvktIktN~igtln~lglakrv~aR~l~aSTseVYgd 147 (350)
T KOG1429|consen 97 HLAAPAS-PPHYKYNPVKTIKTNVIGTLNMLGLAKRVGARFLLASTSEVYGD 147 (350)
T ss_pred hhccCCC-CcccccCccceeeecchhhHHHHHHHHHhCceEEEeecccccCC
Confidence 9999887 44344566778899999999999988877799999999999985
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.3e-13 Score=127.81 Aligned_cols=104 Identities=21% Similarity=0.311 Sum_probs=83.1
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccCCC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT 162 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag~~ 162 (214)
|+|+||||+|+||++++++|+++|++|++++|++.... ..+++++.+|++|+. +.+ ++.++|+|||+|+..
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~~-------~~~ve~v~~Dl~d~~-l~~-al~~~D~VIHLAa~~ 71 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDAL-------DPRVDYVCASLRNPV-LQE-LAGEADAVIHLAPVD 71 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhcc-------cCCceEEEccCCCHH-HHH-HhcCCCEEEEcCccC
Confidence 47999999999999999999999999999998764311 246788999999985 554 467899999999864
Q ss_pred CCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEEcccc
Q 028043 163 AFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVG 204 (214)
Q Consensus 163 ~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~vSS~~ 204 (214)
.. . ...+|+.|+.++++++++...++|++||..
T Consensus 72 ~~------~---~~~vNv~Gt~nLleAA~~~GvRiV~~SS~~ 104 (699)
T PRK12320 72 TS------A---PGGVGITGLAHVANAAARAGARLLFVSQAA 104 (699)
T ss_pred cc------c---hhhHHHHHHHHHHHHHHHcCCeEEEEECCC
Confidence 21 1 236899999999999955334899999874
|
|
| >KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.50 E-value=7.5e-15 Score=112.84 Aligned_cols=128 Identities=18% Similarity=0.228 Sum_probs=102.8
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCCc
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVT 153 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~d 153 (214)
.++-+.+|||+.+|+|++.+++|++.|+.|++++-..++.++..+++ +.++.+...|+++++++..++ |+++|
T Consensus 7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel-g~~~vf~padvtsekdv~aala~ak~kfgrld 85 (260)
T KOG1199|consen 7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL-GGKVVFTPADVTSEKDVRAALAKAKAKFGRLD 85 (260)
T ss_pred hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh-CCceEEeccccCcHHHHHHHHHHHHhhcccee
Confidence 46778999999999999999999999999999999888877777766 467889999999999988754 78999
Q ss_pred EEEeccCCCCC---------CCCCCCCCCchhHHHHHHHHHHHHHh-------cc---C-CCeEEEEcccccccc
Q 028043 154 HVICCTGTTAF---------PSRRWDGDNTPEKVDWEGVRNLVSAL-------PS---S-LKRIVLVSSVGVTKF 208 (214)
Q Consensus 154 ~li~~Ag~~~~---------~~~~~~~~~~~~~vNv~g~~~l~~a~-------~~---~-~~~iV~vSS~~~~~~ 208 (214)
+++||||+... ...+.++.+...++|+.||+|+++.. .+ + .+-||+..|.+++..
T Consensus 86 ~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdg 160 (260)
T KOG1199|consen 86 ALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDG 160 (260)
T ss_pred eeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecC
Confidence 99999998641 11334556677799999999998732 11 1 235899999888753
|
|
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=2e-13 Score=119.24 Aligned_cols=111 Identities=23% Similarity=0.277 Sum_probs=84.0
Q ss_pred CCCCEEEEE----cCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHh-------cccCCCCEEEEEecCCChhccchhh
Q 028043 80 SSSKLVLVA----GGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF-------GKQDEETLQVCKGDTRNPKDLDPAI 148 (214)
Q Consensus 80 ~~~k~vlIT----GasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~-------~~~~~~~~~~v~~Di~d~~~v~~~~ 148 (214)
.++|+|+|| ||+|+||++++++|+++|++|++++|+.+....+. .++...+++++.+|+.|.+.+.+
T Consensus 50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~~~~-- 127 (378)
T PLN00016 50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPADVKSKVA-- 127 (378)
T ss_pred cccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHHHHhhhc--
Confidence 355889999 99999999999999999999999999875432211 11112358889999987433321
Q ss_pred hCCCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccccccccC
Q 028043 149 FEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~~ 209 (214)
..++|+|||+++. +..++.+++++++ .+++++|++||.++|+..
T Consensus 128 ~~~~d~Vi~~~~~-----------------~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~ 172 (378)
T PLN00016 128 GAGFDVVYDNNGK-----------------DLDEVEPVADWAKSPGLKQFLFCSSAGVYKKS 172 (378)
T ss_pred cCCccEEEeCCCC-----------------CHHHHHHHHHHHHHcCCCEEEEEccHhhcCCC
Confidence 2479999999762 1346788999985 588999999999998753
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.4e-13 Score=108.61 Aligned_cols=123 Identities=25% Similarity=0.324 Sum_probs=81.8
Q ss_pred EEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChh---HHHHHhcccC--CCCEEEEEecCCChhccchhh------hCC
Q 028043 84 LVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPE---KATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~---~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
+++||||.|+||..+++.|+++|. +|+++.|+.. ..++..+++. +..+.++.+|++|++++++++ +++
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~ 81 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP 81 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence 689999999999999999999986 6999999831 1222222222 567889999999999988744 357
Q ss_pred CcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEcccccc
Q 028043 152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVT 206 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~ 206 (214)
+|.|||+||...... .+.+.....+...+.|+.++.+++. .....+|..||+++.
T Consensus 82 i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~ 140 (181)
T PF08659_consen 82 IDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSL 140 (181)
T ss_dssp EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHH
T ss_pred cceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHh
Confidence 899999999865221 1222234445667899999999885 477899999999764
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=99.45 E-value=3.8e-14 Score=116.04 Aligned_cols=117 Identities=15% Similarity=0.169 Sum_probs=89.8
Q ss_pred cCc--hHHHHHHHHHHHHCCCeEEEEEcChhHH----HHHhcccCCCCEEEEEecCCChhccchhh------h-CCCcEE
Q 028043 89 GGS--GGVGQLVVASLLSRNIKSRLLLRDPEKA----TTLFGKQDEETLQVCKGDTRNPKDLDPAI------F-EGVTHV 155 (214)
Q Consensus 89 Gas--ggIG~~la~~L~~~G~~V~~~~r~~~~~----~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~-~~~d~l 155 (214)
|++ +|||++++++|+++|++|++++|+.++. +++.++.. ..++++|++|++++++.+ + +++|+|
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~---~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~l 77 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYG---AEVIQCDLSDEESVEALFDEAVERFGGRIDIL 77 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTT---SEEEESCTTSHHHHHHHHHHHHHHHCSSESEE
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcC---CceEeecCcchHHHHHHHHHHHhhcCCCeEEE
Confidence 666 9999999999999999999999999874 33333332 346999999999988743 6 889999
Q ss_pred EeccCCCCCC---C----CCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEcccccccc
Q 028043 156 ICCTGTTAFP---S----RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 156 i~~Ag~~~~~---~----~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~~ 208 (214)
|||+|..... . ..+++....+++|+.++..+++++.+ ..++||++||.++..+
T Consensus 78 V~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~ 140 (241)
T PF13561_consen 78 VNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRP 140 (241)
T ss_dssp EEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSB
T ss_pred EecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhccc
Confidence 9999987630 1 11233456678899999999987732 3378999999977554
|
... |
| >KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.9e-13 Score=109.78 Aligned_cols=126 Identities=20% Similarity=0.184 Sum_probs=97.4
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC-----eEEEEEcChhHHHHHhccc----C--CCCEEEEEecCCChhccchhh-
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI-----KSRLLLRDPEKATTLFGKQ----D--EETLQVCKGDTRNPKDLDPAI- 148 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~-----~V~~~~r~~~~~~~~~~~~----~--~~~~~~v~~Di~d~~~v~~~~- 148 (214)
+.|+++|||+++|||.++|.+|++... ++++.+|+.++.++++..+ + ...++++..|+++..++.++.
T Consensus 2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~ 81 (341)
T KOG1478|consen 2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK 81 (341)
T ss_pred CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence 458999999999999999999998654 4777899998888765433 2 346788999999999888754
Q ss_pred -----hCCCcEEEeccCCCCCCC------------------------------CCCCCCCchhHHHHHHHHHHHHHhcc-
Q 028043 149 -----FEGVTHVICCTGTTAFPS------------------------------RRWDGDNTPEKVDWEGVRNLVSALPS- 192 (214)
Q Consensus 149 -----~~~~d~li~~Ag~~~~~~------------------------------~~~~~~~~~~~vNv~g~~~l~~a~~~- 192 (214)
|+++|.++.|||.+..+. ...+.....++.||.|++.+.+.+.+
T Consensus 82 di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pl 161 (341)
T KOG1478|consen 82 DIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPL 161 (341)
T ss_pred HHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhH
Confidence 668999999999976421 12244567789999999998886632
Q ss_pred ----CCCeEEEEcccccc
Q 028043 193 ----SLKRIVLVSSVGVT 206 (214)
Q Consensus 193 ----~~~~iV~vSS~~~~ 206 (214)
...++|++||..+-
T Consensus 162 l~~~~~~~lvwtSS~~a~ 179 (341)
T KOG1478|consen 162 LCHSDNPQLVWTSSRMAR 179 (341)
T ss_pred hhcCCCCeEEEEeecccc
Confidence 23489999998763
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=99.42 E-value=6.7e-13 Score=111.26 Aligned_cols=102 Identities=15% Similarity=0.183 Sum_probs=79.8
Q ss_pred EEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh-----hCC-CcEEEe
Q 028043 84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-----FEG-VTHVIC 157 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~-----~~~-~d~li~ 157 (214)
+|+||||||+||++++++|+++|++|++++|++++.. ..+++.+.+|+.|++++..++ +.+ +|.+++
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~-------~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~ 73 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA-------GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYL 73 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc-------CCCCccccccCCCHHHHHHHHhcccCcCCceeEEEE
Confidence 4899999999999999999999999999999987542 235667889999999998753 156 999999
Q ss_pred ccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHh-ccCCCeEEEEcccccc
Q 028043 158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-PSSLKRIVLVSSVGVT 206 (214)
Q Consensus 158 ~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~-~~~~~~iV~vSS~~~~ 206 (214)
+++... + ......++++++ +.++++||++||....
T Consensus 74 ~~~~~~-------~-------~~~~~~~~i~aa~~~gv~~~V~~Ss~~~~ 109 (285)
T TIGR03649 74 VAPPIP-------D-------LAPPMIKFIDFARSKGVRRFVLLSASIIE 109 (285)
T ss_pred eCCCCC-------C-------hhHHHHHHHHHHHHcCCCEEEEeeccccC
Confidence 987431 1 012446788877 4689999999997653
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.41 E-value=6.8e-13 Score=110.89 Aligned_cols=113 Identities=22% Similarity=0.302 Sum_probs=77.2
Q ss_pred EEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccCCCCC
Q 028043 85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAF 164 (214)
Q Consensus 85 vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag~~~~ 164 (214)
|+||||+|+||++++++|+++|++|++++|++...+... ... ..|+.. +.+.. .+.++|+|||+||....
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~----~~~~~~-~~~~~-~~~~~D~Vvh~a~~~~~ 70 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK----WEG----YKPWAP-LAESE-ALEGADAVINLAGEPIA 70 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc----cee----eecccc-cchhh-hcCCCCEEEECCCCCcc
Confidence 689999999999999999999999999999876543211 001 122322 23333 35789999999997542
Q ss_pred CCCCCC--CCCchhHHHHHHHHHHHHHhcc-CCC--eEEEEcccccccc
Q 028043 165 PSRRWD--GDNTPEKVDWEGVRNLVSALPS-SLK--RIVLVSSVGVTKF 208 (214)
Q Consensus 165 ~~~~~~--~~~~~~~vNv~g~~~l~~a~~~-~~~--~iV~vSS~~~~~~ 208 (214)
. ..+. .....+++|+.++.+++++++. +.+ .+|+.||.+.|+.
T Consensus 71 ~-~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~ 118 (292)
T TIGR01777 71 D-KRWTEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGT 118 (292)
T ss_pred c-ccCCHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCC
Confidence 1 1222 2234568899999999999954 443 4566666666663
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.8e-12 Score=121.01 Aligned_cols=105 Identities=19% Similarity=0.177 Sum_probs=79.1
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhh-CCCcEEEecc
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-EGVTHVICCT 159 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~-~~~d~li~~A 159 (214)
..|+||||||+|+||++++++|.++|++|.. ..+|++|.+.+.+.+- .++|+|||+|
T Consensus 379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~----------------------~~~~l~d~~~v~~~i~~~~pd~Vih~A 436 (668)
T PLN02260 379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAYEY----------------------GKGRLEDRSSLLADIRNVKPTHVFNAA 436 (668)
T ss_pred CCceEEEECCCchHHHHHHHHHHhCCCeEEe----------------------eccccccHHHHHHHHHhhCCCEEEECC
Confidence 4578999999999999999999999998731 1145777777765322 2799999999
Q ss_pred CCCCCCCC--CCCCCCchhHHHHHHHHHHHHHhcc-CCCeEEEEcccccccc
Q 028043 160 GTTAFPSR--RWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 160 g~~~~~~~--~~~~~~~~~~vNv~g~~~l~~a~~~-~~~~iV~vSS~~~~~~ 208 (214)
+....+.. ...++...+++|+.|+.+++++++. +. ++|++||..+|++
T Consensus 437 a~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~-~~v~~Ss~~v~~~ 487 (668)
T PLN02260 437 GVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGL-LMMNFATGCIFEY 487 (668)
T ss_pred cccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCC-eEEEEcccceecC
Confidence 98753322 1235567789999999999999955 55 5677888777653
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.36 E-value=2.9e-12 Score=109.57 Aligned_cols=122 Identities=21% Similarity=0.286 Sum_probs=88.9
Q ss_pred CEEEEEcCchHHHHHHHHHHHHC-CCeEEEEEcChh------HHHHHhc------ccCCCCEEEEEecCCChhc-cch--
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPE------KATTLFG------KQDEETLQVCKGDTRNPKD-LDP-- 146 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~-G~~V~~~~r~~~------~~~~~~~------~~~~~~~~~v~~Di~d~~~-v~~-- 146 (214)
+++++|||||++|..+..+|+.+ ..+|+++.|-.+ ++++... +....+++++.+|++.++- +.+
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~ 80 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT 80 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence 47999999999999999999875 459999998543 2222222 1225679999999985431 221
Q ss_pred --hhhCCCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CCCeEEEEcccccccc
Q 028043 147 --AIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 147 --~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~~~iV~vSS~~~~~~ 208 (214)
.+.+.+|.|||||+..+. .....+....||.||..+++.+.. +.|.+.||||++++..
T Consensus 81 ~~~La~~vD~I~H~gA~Vn~----v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~ 141 (382)
T COG3320 81 WQELAENVDLIIHNAALVNH----VFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGET 141 (382)
T ss_pred HHHHhhhcceEEecchhhcc----cCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccc
Confidence 124579999999997652 123345568899999999997755 4677999999998764
|
|
| >KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.33 E-value=3e-11 Score=105.18 Aligned_cols=132 Identities=40% Similarity=0.546 Sum_probs=94.4
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhc-ccCCCCEEEEEecCCChhccchhhhC----CC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFG-KQDEETLQVCKGDTRNPKDLDPAIFE----GV 152 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~v~~Di~d~~~v~~~~~~----~~ 152 (214)
.+.+.++|+|+||+|++|+.+++.|+++|+.|.++.|+.++.+.+.. .........+..|.....++...+.+ ..
T Consensus 75 ~~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~~ 154 (411)
T KOG1203|consen 75 NSKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPKGV 154 (411)
T ss_pred CCCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhccccc
Confidence 45567899999999999999999999999999999999988877654 22233445556665555444432333 23
Q ss_pred cEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccccccccCCCCC
Q 028043 153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNELPW 213 (214)
Q Consensus 153 d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~~~~p~ 213 (214)
.+++-++|-.. ..+ +....+.|...|+.++++||+ .+++|+|++||+++-.++..+|
T Consensus 155 ~~v~~~~ggrp--~~e--d~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~~~~~~~ 212 (411)
T KOG1203|consen 155 VIVIKGAGGRP--EEE--DIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTKFNQPPN 212 (411)
T ss_pred eeEEecccCCC--Ccc--cCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCcccCCCch
Confidence 45666665432 221 233445789999999999995 6999999999998876665544
|
|
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.1e-11 Score=102.26 Aligned_cols=126 Identities=17% Similarity=0.212 Sum_probs=100.6
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHH----Hhc--ccCCCCEEEEEecCCChhccchhhh-CCCc
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATT----LFG--KQDEETLQVCKGDTRNPKDLDPAIF-EGVT 153 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~----~~~--~~~~~~~~~v~~Di~d~~~v~~~~~-~~~d 153 (214)
++|++||||-||.-|+.|++.|+++||.|.++.|+.+.... +.+ ...+.++..+.+|++|...+.+.+- -++|
T Consensus 1 ~~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~Pd 80 (345)
T COG1089 1 MGKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPD 80 (345)
T ss_pred CCceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCch
Confidence 36899999999999999999999999999999987443211 111 1124558899999999999887542 2799
Q ss_pred EEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-C--CCeEEEEccccccc
Q 028043 154 HVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S--LKRIVLVSSVGVTK 207 (214)
Q Consensus 154 ~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~--~~~iV~vSS~~~~~ 207 (214)
-|+|.|+.++++ ..|+.+....+++-.|+.+++++++. + ..|+...||.--||
T Consensus 81 EIYNLaAQS~V~-vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG 136 (345)
T COG1089 81 EIYNLAAQSHVG-VSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYG 136 (345)
T ss_pred hheecccccccc-ccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhc
Confidence 999999998854 56788888889999999999999954 2 35888888887776
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.8e-11 Score=100.73 Aligned_cols=112 Identities=24% Similarity=0.366 Sum_probs=77.2
Q ss_pred EEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccCCCCC
Q 028043 85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAF 164 (214)
Q Consensus 85 vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag~~~~ 164 (214)
|+||||||+||++++.+|.+.||+|+++.|++.+.+.... ..+ ...+.+.+..-.++|+|||.||....
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~----~~v-------~~~~~~~~~~~~~~DavINLAG~~I~ 69 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLH----PNV-------TLWEGLADALTLGIDAVINLAGEPIA 69 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcC----ccc-------cccchhhhcccCCCCEEEECCCCccc
Confidence 6899999999999999999999999999999877654321 111 12223333211279999999998753
Q ss_pred CCCCCCCC--CchhHHHHHHHHHHHHHhc---cCCCeEEEEcccccccc
Q 028043 165 PSRRWDGD--NTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 165 ~~~~~~~~--~~~~~vNv~g~~~l~~a~~---~~~~~iV~vSS~~~~~~ 208 (214)
...|... +...+..+..|..+.+++. .+.+.+|.-|.++.||.
T Consensus 70 -~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~ 117 (297)
T COG1090 70 -ERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGH 117 (297)
T ss_pred -cccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecC
Confidence 2345544 3334556888999988773 34556676666666664
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=99.25 E-value=3e-11 Score=98.40 Aligned_cols=104 Identities=31% Similarity=0.421 Sum_probs=78.8
Q ss_pred EEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhH--HHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccCCC
Q 028043 85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK--ATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT 162 (214)
Q Consensus 85 vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag~~ 162 (214)
|+|+||+|.+|+.+++.|++.|++|.++.|++.. .+++. ..+++++.+|+.|++++.+ .+.++|.||++.+..
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~----~~g~~vv~~d~~~~~~l~~-al~g~d~v~~~~~~~ 75 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQ----ALGAEVVEADYDDPESLVA-ALKGVDAVFSVTPPS 75 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHH----HTTTEEEES-TT-HHHHHH-HHTTCSEEEEESSCS
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhh----cccceEeecccCCHHHHHH-HHcCCceEEeecCcc
Confidence 7999999999999999999999999999998743 33332 3467889999999999997 489999999988854
Q ss_pred CCCCCCCCCCCchhHHHHHHHHHHHHHh-ccCCCeEEEEcccccc
Q 028043 163 AFPSRRWDGDNTPEKVDWEGVRNLVSAL-PSSLKRIVLVSSVGVT 206 (214)
Q Consensus 163 ~~~~~~~~~~~~~~~vNv~g~~~l~~a~-~~~~~~iV~vSS~~~~ 206 (214)
. ........++++|+ +.+++++|+.|....+
T Consensus 76 ~-------------~~~~~~~~~li~Aa~~agVk~~v~ss~~~~~ 107 (233)
T PF05368_consen 76 H-------------PSELEQQKNLIDAAKAAGVKHFVPSSFGADY 107 (233)
T ss_dssp C-------------CCHHHHHHHHHHHHHHHT-SEEEESEESSGT
T ss_pred h-------------hhhhhhhhhHHHhhhccccceEEEEEecccc
Confidence 2 11234567889988 4589999865544443
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.1e-10 Score=96.61 Aligned_cols=114 Identities=32% Similarity=0.378 Sum_probs=92.1
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccCCC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT 162 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag~~ 162 (214)
++|+||||||++|++++++|+++|++|++..|+++...... .++++..+|+.+++.+.. .+.+.|.+++..+..
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~-----~~v~~~~~d~~~~~~l~~-a~~G~~~~~~i~~~~ 74 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA-----GGVEVVLGDLRDPKSLVA-GAKGVDGVLLISGLL 74 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc-----CCcEEEEeccCCHhHHHH-HhccccEEEEEeccc
Confidence 47999999999999999999999999999999999887754 568899999999999986 478999999999865
Q ss_pred CCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEEccccccccC
Q 028043 163 AFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 163 ~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~vSS~~~~~~~ 209 (214)
. +. . ...........+..+++..+..+++.+|...+....
T Consensus 75 ~-~~----~--~~~~~~~~~~~~~a~~a~~~~~~~~~~s~~~~~~~~ 114 (275)
T COG0702 75 D-GS----D--AFRAVQVTAVVRAAEAAGAGVKHGVSLSVLGADAAS 114 (275)
T ss_pred c-cc----c--chhHHHHHHHHHHHHHhcCCceEEEEeccCCCCCCC
Confidence 3 21 1 234556666677777766677889999988765433
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.21 E-value=4.3e-11 Score=119.61 Aligned_cols=121 Identities=18% Similarity=0.221 Sum_probs=88.0
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCC----CeEEEEEcChhHHH---HHhccc---------CCCCEEEEEecCCChh---
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRN----IKSRLLLRDPEKAT---TLFGKQ---------DEETLQVCKGDTRNPK--- 142 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G----~~V~~~~r~~~~~~---~~~~~~---------~~~~~~~v~~Di~d~~--- 142 (214)
.++|+||||+|+||.+++++|+++| ++|+++.|+....+ .+.+.. ...+++++.+|++++.
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence 5899999999999999999999887 78999999743322 111100 0136888999998652
Q ss_pred ---ccchhhhCCCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccccccc
Q 028043 143 ---DLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 143 ---~v~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~ 207 (214)
..+. +..++|+|||||+..... .........|+.|+.+++++++ .+.++++++||.++++
T Consensus 1051 ~~~~~~~-l~~~~d~iiH~Aa~~~~~----~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~ 1114 (1389)
T TIGR03443 1051 SDEKWSD-LTNEVDVIIHNGALVHWV----YPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALD 1114 (1389)
T ss_pred CHHHHHH-HHhcCCEEEECCcEecCc----cCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecC
Confidence 2222 346799999999976421 1222334679999999999884 4678999999998875
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.18 E-value=7.9e-11 Score=97.27 Aligned_cols=123 Identities=20% Similarity=0.208 Sum_probs=97.9
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChh-HHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEE
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-KATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVI 156 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li 156 (214)
.+..|-++-|.||||++|+.++.+|++.|-+|++-.|..+ ....++-.-+-.++.+...|+.|++++++ +.+.-++||
T Consensus 57 sS~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~-vvk~sNVVI 135 (391)
T KOG2865|consen 57 SSVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRA-VVKHSNVVI 135 (391)
T ss_pred ccccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHH-HHHhCcEEE
Confidence 3456778999999999999999999999999999988543 33333322223468889999999999997 478899999
Q ss_pred eccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CCCeEEEEcccccc
Q 028043 157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVT 206 (214)
Q Consensus 157 ~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~~~iV~vSS~~~~ 206 (214)
|..|--. + .....+.++|+.++..+++.|++ ++.|+|++|+.++.
T Consensus 136 NLIGrd~-e----Tknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lgan 181 (391)
T KOG2865|consen 136 NLIGRDY-E----TKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGAN 181 (391)
T ss_pred Eeecccc-c----cCCcccccccchHHHHHHHHHHhhChhheeehhhcccc
Confidence 9999643 1 23345679999999999999965 89999999998753
|
|
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=3.1e-10 Score=89.25 Aligned_cols=103 Identities=17% Similarity=0.123 Sum_probs=74.6
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC-CCCEEEEEecCCChhccchhh------hCCCcEE
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAI------FEGVTHV 155 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~v~~Di~d~~~v~~~~------~~~~d~l 155 (214)
|+++||||+|++ .+++++|+++|++|++++|++++.+++...+. ...+.++.+|++|++++++++ ++++|.+
T Consensus 1 m~vlVtGGtG~g-g~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~l 79 (177)
T PRK08309 1 MHALVIGGTGML-KRVSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLA 79 (177)
T ss_pred CEEEEECcCHHH-HHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEE
Confidence 479999999655 56999999999999999999887776554332 346778899999999988743 3467777
Q ss_pred EeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CCC----eEEEEccccc
Q 028043 156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLK----RIVLVSSVGV 205 (214)
Q Consensus 156 i~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~~----~iV~vSS~~~ 205 (214)
|+.+- +.++.++.+++++ +++ +++++=...+
T Consensus 80 v~~vh-------------------~~~~~~~~~~~~~~gv~~~~~~~~h~~gs~~ 115 (177)
T PRK08309 80 VAWIH-------------------SSAKDALSVVCRELDGSSETYRLFHVLGSAA 115 (177)
T ss_pred EEecc-------------------ccchhhHHHHHHHHccCCCCceEEEEeCCcC
Confidence 75553 3356778887743 555 6776644333
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=2.3e-10 Score=93.76 Aligned_cols=96 Identities=19% Similarity=0.156 Sum_probs=75.4
Q ss_pred HHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh---hCCCcEEEeccCCCCCCCCCCCCCCc
Q 028043 98 VVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI---FEGVTHVICCTGTTAFPSRRWDGDNT 174 (214)
Q Consensus 98 la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~---~~~~d~li~~Ag~~~~~~~~~~~~~~ 174 (214)
++++|+++|++|++++|++++.+. .+++++|++|.+++++++ .+++|+||||||.... ...+.
T Consensus 1 ~a~~l~~~G~~Vv~~~r~~~~~~~---------~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~-----~~~~~ 66 (241)
T PRK12428 1 TARLLRFLGARVIGVDRREPGMTL---------DGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGT-----APVEL 66 (241)
T ss_pred ChHHHHhCCCEEEEEeCCcchhhh---------hHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCC-----CCHHH
Confidence 478999999999999998765421 245789999999988743 2479999999997531 24556
Q ss_pred hhHHHHHHHHHHHHHhcc---CCCeEEEEccccccc
Q 028043 175 PEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTK 207 (214)
Q Consensus 175 ~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~ 207 (214)
.+++|+.|+..+++++.+ ..++||++||.++++
T Consensus 67 ~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~ 102 (241)
T PRK12428 67 VARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAE 102 (241)
T ss_pred hhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhc
Confidence 789999999999998732 237999999998874
|
|
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=1e-09 Score=95.17 Aligned_cols=81 Identities=17% Similarity=0.182 Sum_probs=61.7
Q ss_pred CCCEEEEEcCchHHHHH--HHHHHHHCCCeEEEEEcChh--H-------------HHHHhcccCCCCEEEEEecCCChhc
Q 028043 81 SSKLVLVAGGSGGVGQL--VVASLLSRNIKSRLLLRDPE--K-------------ATTLFGKQDEETLQVCKGDTRNPKD 143 (214)
Q Consensus 81 ~~k~vlITGasggIG~~--la~~L~~~G~~V~~~~r~~~--~-------------~~~~~~~~~~~~~~~v~~Di~d~~~ 143 (214)
.+|++||||+++|||.+ ++++| +.|++|+++++..+ . .++..+.. +..+..+.+|++++++
T Consensus 40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~-G~~a~~i~~DVss~E~ 117 (398)
T PRK13656 40 GPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAA-GLYAKSINGDAFSDEI 117 (398)
T ss_pred CCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhc-CCceEEEEcCCCCHHH
Confidence 46999999999999999 89999 99999988885321 1 12222221 3346678999999998
Q ss_pred cchhh------hCCCcEEEeccCCCC
Q 028043 144 LDPAI------FEGVTHVICCTGTTA 163 (214)
Q Consensus 144 v~~~~------~~~~d~li~~Ag~~~ 163 (214)
+++.+ ++++|+||||+|...
T Consensus 118 v~~lie~I~e~~G~IDiLVnSaA~~~ 143 (398)
T PRK13656 118 KQKVIELIKQDLGQVDLVVYSLASPR 143 (398)
T ss_pred HHHHHHHHHHhcCCCCEEEECCccCC
Confidence 87633 678999999999863
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.02 E-value=3.6e-09 Score=82.35 Aligned_cols=109 Identities=19% Similarity=0.343 Sum_probs=86.5
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccCCC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT 162 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag~~ 162 (214)
|+|.|.||+|-+|++++++..++||+|+++.|++++.... .++.+++.|+.|++++.. .+.+.|+||..-|..
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~------~~~~i~q~Difd~~~~a~-~l~g~DaVIsA~~~~ 73 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR------QGVTILQKDIFDLTSLAS-DLAGHDAVISAFGAG 73 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc------ccceeecccccChhhhHh-hhcCCceEEEeccCC
Confidence 5799999999999999999999999999999999987653 356789999999999876 478899999988765
Q ss_pred CCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CCCeEEEEccccccc
Q 028043 163 AFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTK 207 (214)
Q Consensus 163 ~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~~~iV~vSS~~~~~ 207 (214)
.. +. ..........+++.++. ++.|++.++-.+...
T Consensus 74 ~~------~~---~~~~~k~~~~li~~l~~agv~RllVVGGAGSL~ 110 (211)
T COG2910 74 AS------DN---DELHSKSIEALIEALKGAGVPRLLVVGGAGSLE 110 (211)
T ss_pred CC------Ch---hHHHHHHHHHHHHHHhhcCCeeEEEEcCccceE
Confidence 31 11 12234446677787765 889999998776553
|
|
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.00 E-value=3.2e-10 Score=93.52 Aligned_cols=127 Identities=20% Similarity=0.202 Sum_probs=94.1
Q ss_pred CEEEEEcCchHHHHHHHHHHHHC--CCeEEEEEcCh--hHHHHHhcccCCCCEEEEEecCCChhccchhh-hCCCcEEEe
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSR--NIKSRLLLRDP--EKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-FEGVTHVIC 157 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~--G~~V~~~~r~~--~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~-~~~~d~li~ 157 (214)
|.++||||.|+||+..+..+... .++.+.++.-. +.+..+.+....++..++++|+.|...+.... ...+|.|+|
T Consensus 7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~vih 86 (331)
T KOG0747|consen 7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDTVIH 86 (331)
T ss_pred ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhccCchhhhhh
Confidence 78999999999999999999875 45555443311 11333322233678899999999988877532 247999999
Q ss_pred ccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc--CCCeEEEEccccccccCC
Q 028043 158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS--SLKRIVLVSSVGVTKFNE 210 (214)
Q Consensus 158 ~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~--~~~~iV~vSS~~~~~~~~ 210 (214)
.|+..++.. .+.+.......|+.++..++++++. +.+++|++||..+||...
T Consensus 87 faa~t~vd~-s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~ 140 (331)
T KOG0747|consen 87 FAAQTHVDR-SFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSD 140 (331)
T ss_pred hHhhhhhhh-hcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCcc
Confidence 999887432 3344455668899999999999853 678999999999999754
|
|
| >KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.7e-10 Score=92.46 Aligned_cols=128 Identities=19% Similarity=0.089 Sum_probs=84.1
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh--hHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP--EKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
++|.+|+||++.|||..++..+.+.+-+.....++. ...+.+.... +.......+|+++...+++.. .++.
T Consensus 5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~~~L~v~~-gd~~v~~~g~~~e~~~l~al~e~~r~k~gkr 83 (253)
T KOG1204|consen 5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAELEGLKVAY-GDDFVHVVGDITEEQLLGALREAPRKKGGKR 83 (253)
T ss_pred cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhcccccccceEEEe-cCCcceechHHHHHHHHHHHHhhhhhcCCce
Confidence 468999999999999999999988887654444333 2222221111 122334556777655444321 3468
Q ss_pred cEEEeccCCCCCCC------CCCCCCCchhHHHHHHHHHHHHHh----ccC--CCeEEEEccccccccC
Q 028043 153 THVICCTGTTAFPS------RRWDGDNTPEKVDWEGVRNLVSAL----PSS--LKRIVLVSSVGVTKFN 209 (214)
Q Consensus 153 d~li~~Ag~~~~~~------~~~~~~~~~~~vNv~g~~~l~~a~----~~~--~~~iV~vSS~~~~~~~ 209 (214)
|++|||||...... .+.+.+.+++++|+.+..-+.+.+ +.. .+.+|++||.++..+.
T Consensus 84 ~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~ 152 (253)
T KOG1204|consen 84 DIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPF 152 (253)
T ss_pred eEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccc
Confidence 99999999876321 233445778899999988877754 222 4789999999886653
|
|
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=4.7e-09 Score=89.74 Aligned_cols=121 Identities=21% Similarity=0.168 Sum_probs=85.2
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCC--CeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
.++++|.|+|++|.||+.++..|+.+| .+++++|++....+. ..+..........+.+|+.++.+ .+.+.|+||+
T Consensus 6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a--~Dl~~~~~~~~v~~~td~~~~~~-~l~gaDvVVi 82 (321)
T PTZ00325 6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVA--ADLSHIDTPAKVTGYADGELWEK-ALRGADLVLI 82 (321)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccc--cchhhcCcCceEEEecCCCchHH-HhCCCCEEEE
Confidence 467899999999999999999998655 589999993322211 11111111334556766555343 3678999999
Q ss_pred ccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEcccccc
Q 028043 158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVT 206 (214)
Q Consensus 158 ~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~ 206 (214)
+||....+.. ...+.+..|+..+.+++++++ .+.+++|+++|..+.
T Consensus 83 taG~~~~~~~---tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvd 129 (321)
T PTZ00325 83 CAGVPRKPGM---TRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVN 129 (321)
T ss_pred CCCCCCCCCC---CHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHH
Confidence 9998643222 234567899999999999984 588899999997654
|
|
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.87 E-value=4.4e-09 Score=93.11 Aligned_cols=123 Identities=24% Similarity=0.361 Sum_probs=87.1
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCC---CeEEEEEcChh------HHHHH-----hc----ccC--CCCEEEEEecCC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRN---IKSRLLLRDPE------KATTL-----FG----KQD--EETLQVCKGDTR 139 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G---~~V~~~~r~~~------~~~~~-----~~----~~~--~~~~~~v~~Di~ 139 (214)
..+|+|+|||||||+|+-+++.|++.- .++.++-|... +++.. .+ ..+ -.++..+.||++
T Consensus 10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~ 89 (467)
T KOG1221|consen 10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS 89 (467)
T ss_pred hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence 467999999999999999999998754 26888877532 22111 11 111 135677889998
Q ss_pred Chhc-cc----hhhhCCCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc--CCCeEEEEcccccc
Q 028043 140 NPKD-LD----PAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS--SLKRIVLVSSVGVT 206 (214)
Q Consensus 140 d~~~-v~----~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~--~~~~iV~vSS~~~~ 206 (214)
+++- +. +.+...+|+|||+|+...+. +..+....+|..||.++++.+++ ..+-+|++|+..+.
T Consensus 90 ~~~LGis~~D~~~l~~eV~ivih~AAtvrFd----e~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n 159 (467)
T KOG1221|consen 90 EPDLGISESDLRTLADEVNIVIHSAATVRFD----EPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSN 159 (467)
T ss_pred CcccCCChHHHHHHHhcCCEEEEeeeeeccc----hhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhhee
Confidence 7642 21 12356899999999987642 23344568899999999998864 56789999998664
|
|
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.5e-08 Score=80.60 Aligned_cols=84 Identities=21% Similarity=0.202 Sum_probs=66.7
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC-CCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
++++++++|+||+|++|+.+++.|++.|++|++++|+.++.+++.+.+. ..+.....+|..+.+++.+ .+.+.|+||+
T Consensus 25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~diVi~ 103 (194)
T cd01078 25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAA-AIKGADVVFA 103 (194)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHH-HHhcCCEEEE
Confidence 4567999999999999999999999999999999999988877655442 1234456678888888775 4678999998
Q ss_pred ccCCCC
Q 028043 158 CTGTTA 163 (214)
Q Consensus 158 ~Ag~~~ 163 (214)
+.....
T Consensus 104 at~~g~ 109 (194)
T cd01078 104 AGAAGV 109 (194)
T ss_pred CCCCCc
Confidence 776443
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=98.84 E-value=7.7e-09 Score=90.93 Aligned_cols=77 Identities=18% Similarity=0.249 Sum_probs=61.0
Q ss_pred CCCCCEEEEEcC----------------chHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChh
Q 028043 79 ASSSKLVLVAGG----------------SGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK 142 (214)
Q Consensus 79 ~~~~k~vlITGa----------------sggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~ 142 (214)
+++||+++|||| +|++|+++|++|+++|++|++++++.+ .+. ..+ ...+|+++.+
T Consensus 185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~~------~~~--~~~~dv~~~~ 255 (399)
T PRK05579 185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LPT------PAG--VKRIDVESAQ 255 (399)
T ss_pred ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-ccC------CCC--cEEEccCCHH
Confidence 367899999999 777999999999999999999998752 110 112 3467999988
Q ss_pred ccchhh---hCCCcEEEeccCCCCC
Q 028043 143 DLDPAI---FEGVTHVICCTGTTAF 164 (214)
Q Consensus 143 ~v~~~~---~~~~d~li~~Ag~~~~ 164 (214)
++.+++ ++++|++|||||+..+
T Consensus 256 ~~~~~v~~~~~~~DilI~~Aav~d~ 280 (399)
T PRK05579 256 EMLDAVLAALPQADIFIMAAAVADY 280 (399)
T ss_pred HHHHHHHHhcCCCCEEEEccccccc
Confidence 877654 4679999999998764
|
|
| >KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.2e-08 Score=79.15 Aligned_cols=122 Identities=23% Similarity=0.224 Sum_probs=92.4
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC--eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
+.+|.++|.||||-.|+.+.+.+++.+- +|+++.|++..-.+. +..+.....|....++.... +.++|++++
T Consensus 16 mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at-----~k~v~q~~vDf~Kl~~~a~~-~qg~dV~Fc 89 (238)
T KOG4039|consen 16 MQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT-----DKVVAQVEVDFSKLSQLATN-EQGPDVLFC 89 (238)
T ss_pred hhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccc-----cceeeeEEechHHHHHHHhh-hcCCceEEE
Confidence 4568999999999999999999999885 799999885222211 34466677888888777653 678999999
Q ss_pred ccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CCCeEEEEccccccccCCC
Q 028043 158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFNEL 211 (214)
Q Consensus 158 ~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~~~iV~vSS~~~~~~~~~ 211 (214)
+-|...... ..+.++.++..-...+++++++ ++++|+.+||.++.....+
T Consensus 90 aLgTTRgka----GadgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GAd~sSrF 140 (238)
T KOG4039|consen 90 ALGTTRGKA----GADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGADPSSRF 140 (238)
T ss_pred eeccccccc----ccCceEeechHHHHHHHHHHHhCCCeEEEEEeccCCCcccce
Confidence 999876322 2345567777777888888864 8899999999988654433
|
|
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.83 E-value=2.3e-08 Score=87.04 Aligned_cols=79 Identities=20% Similarity=0.241 Sum_probs=67.9
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCC-CeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
+|+|+|.|| |+||+.++..|+++| .+|++.+|+.+++++..... ..+++..++|+.|.+++.+ ++.+.|+|||++.
T Consensus 1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~-~~~v~~~~vD~~d~~al~~-li~~~d~VIn~~p 77 (389)
T COG1748 1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI-GGKVEALQVDAADVDALVA-LIKDFDLVINAAP 77 (389)
T ss_pred CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhc-cccceeEEecccChHHHHH-HHhcCCEEEEeCC
Confidence 478999998 999999999999999 89999999999988875443 2378999999999999987 4677799999998
Q ss_pred CCC
Q 028043 161 TTA 163 (214)
Q Consensus 161 ~~~ 163 (214)
...
T Consensus 78 ~~~ 80 (389)
T COG1748 78 PFV 80 (389)
T ss_pred chh
Confidence 643
|
|
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal | Back alignment and domain information |
|---|
Probab=98.80 E-value=5.1e-09 Score=85.53 Aligned_cols=71 Identities=11% Similarity=0.193 Sum_probs=51.1
Q ss_pred EEEEEc-CchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCCcEEE
Q 028043 84 LVLVAG-GSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVTHVI 156 (214)
Q Consensus 84 ~vlITG-asggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~d~li 156 (214)
+=.||. ++||||+++|++|+++|++|+++++... .. .. ....+|+.+.+++++.+ ++++|++|
T Consensus 16 VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~-l~-------~~--~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLV 85 (227)
T TIGR02114 16 VRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA-LK-------PE--PHPNLSIREIETTKDLLITLKELVQEHDILI 85 (227)
T ss_pred ceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh-cc-------cc--cCCcceeecHHHHHHHHHHHHHHcCCCCEEE
Confidence 445665 4789999999999999999999886321 11 00 01347888887776532 46899999
Q ss_pred eccCCCCC
Q 028043 157 CCTGTTAF 164 (214)
Q Consensus 157 ~~Ag~~~~ 164 (214)
||||+...
T Consensus 86 nnAgv~d~ 93 (227)
T TIGR02114 86 HSMAVSDY 93 (227)
T ss_pred ECCEeccc
Confidence 99998653
|
In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity. |
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.79 E-value=2.9e-08 Score=84.96 Aligned_cols=119 Identities=17% Similarity=0.134 Sum_probs=82.4
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC--eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
..++|.||||+|.||..++..|+.+|. +++++++++...+. . .+..........++++.+++.+ .+.+.|+||+.
T Consensus 17 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a-~-Dl~~~~~~~~i~~~~~~~d~~~-~l~~aDiVVit 93 (323)
T PLN00106 17 PGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVA-A-DVSHINTPAQVRGFLGDDQLGD-ALKGADLVIIP 93 (323)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeE-c-hhhhCCcCceEEEEeCCCCHHH-HcCCCCEEEEe
Confidence 447999999999999999999997665 79999997722111 1 1111111223345544545554 36889999999
Q ss_pred cCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccccc
Q 028043 159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGV 205 (214)
Q Consensus 159 Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~ 205 (214)
||....+.. ...+....|+..+..+.++++ .+...+|+++|--+
T Consensus 94 AG~~~~~g~---~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPv 138 (323)
T PLN00106 94 AGVPRKPGM---TRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPV 138 (323)
T ss_pred CCCCCCCCC---CHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCc
Confidence 998653332 234567889999999999884 57778888887654
|
|
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.77 E-value=2.6e-08 Score=84.21 Aligned_cols=82 Identities=16% Similarity=0.100 Sum_probs=63.6
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCe-EEEEEcCh---hHHHHHhcccC--CCCEEEEEecCCChhccchhhhCCCc
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRDP---EKATTLFGKQD--EETLQVCKGDTRNPKDLDPAIFEGVT 153 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~-V~~~~r~~---~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~~~~~d 153 (214)
+++|+++|+|| ||+|++++..|++.|++ |++++|+. ++.+++.+++. ...+.+..+|+.+.++++. .+...|
T Consensus 124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~-~~~~~D 201 (289)
T PRK12548 124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKA-EIASSD 201 (289)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHh-hhccCC
Confidence 46789999998 79999999999999996 99999986 66666554442 2234556789988777765 356789
Q ss_pred EEEeccCCCC
Q 028043 154 HVICCTGTTA 163 (214)
Q Consensus 154 ~li~~Ag~~~ 163 (214)
+|||+-.+..
T Consensus 202 ilINaTp~Gm 211 (289)
T PRK12548 202 ILVNATLVGM 211 (289)
T ss_pred EEEEeCCCCC
Confidence 9999886654
|
|
| >PRK06732 phosphopantothenate--cysteine ligase; Validated | Back alignment and domain information |
|---|
Probab=98.71 E-value=2.7e-08 Score=81.36 Aligned_cols=74 Identities=11% Similarity=0.267 Sum_probs=50.1
Q ss_pred EEEEEc-CchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCC--hhccchhhhCCCcEEEeccC
Q 028043 84 LVLVAG-GSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN--PKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 84 ~vlITG-asggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d--~~~v~~~~~~~~d~li~~Ag 160 (214)
+-.||+ +||+||++++++|+++|++|++++|+..... ....++.++.++-.+ .+.+.+ .++++|+||||||
T Consensus 17 VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~-----~~~~~v~~i~v~s~~~m~~~l~~-~~~~~DivIh~AA 90 (229)
T PRK06732 17 VRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP-----EPHPNLSIIEIENVDDLLETLEP-LVKDHDVLIHSMA 90 (229)
T ss_pred ceeecCccchHHHHHHHHHHHhCCCEEEEEECcccccC-----CCCCCeEEEEEecHHHHHHHHHH-HhcCCCEEEeCCc
Confidence 456664 5677999999999999999999987643211 012345666544332 123333 3578999999999
Q ss_pred CCC
Q 028043 161 TTA 163 (214)
Q Consensus 161 ~~~ 163 (214)
+..
T Consensus 91 vsd 93 (229)
T PRK06732 91 VSD 93 (229)
T ss_pred cCC
Confidence 875
|
|
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=98.69 E-value=7.7e-08 Score=84.34 Aligned_cols=76 Identities=30% Similarity=0.485 Sum_probs=61.8
Q ss_pred EEEEcCchHHHHHHHHHHHHCCC--eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccCCC
Q 028043 85 VLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT 162 (214)
Q Consensus 85 vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag~~ 162 (214)
|+|.|| |++|+.+++.|++++. +|++.+|+.++++++.+.+...++..+++|+.|.+++++ ++.+.|+|||++|..
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~-~~~~~dvVin~~gp~ 78 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAE-LLRGCDVVINCAGPF 78 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHH-HHTTSSEEEE-SSGG
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHH-HHhcCCEEEECCccc
Confidence 789999 9999999999999874 899999999999888766556789999999999999887 578899999999975
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.67 E-value=3.4e-08 Score=80.75 Aligned_cols=82 Identities=18% Similarity=0.282 Sum_probs=55.5
Q ss_pred CCCCEEEEEcCc----------------hHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhc
Q 028043 80 SSSKLVLVAGGS----------------GGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD 143 (214)
Q Consensus 80 ~~~k~vlITGas----------------ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~ 143 (214)
+.||+|+||+|. |+||+++|++|+++|++|+++++......... .....+..+.+|....+.
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~--~~~~~~~~V~s~~d~~~~ 78 (229)
T PRK09620 1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDI--NNQLELHPFEGIIDLQDK 78 (229)
T ss_pred CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCccc--CCceeEEEEecHHHHHHH
Confidence 368999999886 99999999999999999999886432111100 001223345553333345
Q ss_pred cchhhh--CCCcEEEeccCCCCC
Q 028043 144 LDPAIF--EGVTHVICCTGTTAF 164 (214)
Q Consensus 144 v~~~~~--~~~d~li~~Ag~~~~ 164 (214)
+.+. + .++|+|||+|++..+
T Consensus 79 l~~~-~~~~~~D~VIH~AAvsD~ 100 (229)
T PRK09620 79 MKSI-ITHEKVDAVIMAAAGSDW 100 (229)
T ss_pred HHHH-hcccCCCEEEECccccce
Confidence 5553 4 368999999999774
|
|
| >COG0623 FabI Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=98.60 E-value=4.9e-07 Score=72.88 Aligned_cols=126 Identities=11% Similarity=0.108 Sum_probs=83.6
Q ss_pred CCCCCCEEEEEcCc--hHHHHHHHHHHHHCCCeEEEEEcChh---HHHHHhcccCCCCEEEEEecCCChhccchhh----
Q 028043 78 PASSSKLVLVAGGS--GGVGQLVVASLLSRNIKSRLLLRDPE---KATTLFGKQDEETLQVCKGDTRNPKDLDPAI---- 148 (214)
Q Consensus 78 ~~~~~k~vlITGas--ggIG~~la~~L~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~---- 148 (214)
..++||++||+|-. ..|+..+++.|.+.|+++..+..++. +.+++.+++. ...+++||+++.++++..+
T Consensus 2 g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~l~krv~~la~~~~--s~~v~~cDV~~d~~i~~~f~~i~ 79 (259)
T COG0623 2 GLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELG--SDLVLPCDVTNDESIDALFATIK 79 (259)
T ss_pred CccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHHHhhcc--CCeEEecCCCCHHHHHHHHHHHH
Confidence 35789999999954 69999999999999999999887763 2333433332 2456899999999988633
Q ss_pred --hCCCcEEEeccCCCCCCC-------CCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEccccc
Q 028043 149 --FEGVTHVICCTGTTAFPS-------RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGV 205 (214)
Q Consensus 149 --~~~~d~li~~Ag~~~~~~-------~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~ 205 (214)
++.+|.|||+.|...-.. ..-+.....+++-..+...+++++++ ..+.+|.++=.++
T Consensus 80 ~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs 148 (259)
T COG0623 80 KKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGS 148 (259)
T ss_pred HhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEeccc
Confidence 568999999999875111 01111122223444445556666643 3456776665443
|
|
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=98.58 E-value=2.9e-07 Score=79.07 Aligned_cols=115 Identities=14% Similarity=0.079 Sum_probs=72.9
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCC-------CeEEEEEcChhH--HHHHhcccCCCCEEEEEecCCChhccchhhhCCCc
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRN-------IKSRLLLRDPEK--ATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVT 153 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G-------~~V~~~~r~~~~--~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d 153 (214)
.+|+||||+|+||++++..|+..+ .+|+++++++.. ++...-.+... ......|+....++.+ .+.++|
T Consensus 3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~-~~~~~~~~~~~~~~~~-~l~~aD 80 (325)
T cd01336 3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDC-AFPLLKSVVATTDPEE-AFKDVD 80 (325)
T ss_pred eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhc-cccccCCceecCCHHH-HhCCCC
Confidence 369999999999999999998844 589999996531 22111011000 0011235444455443 367999
Q ss_pred EEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccC---CCeEEEEcc
Q 028043 154 HVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSS---LKRIVLVSS 202 (214)
Q Consensus 154 ~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~---~~~iV~vSS 202 (214)
+|||.||....+ .++-.+.++.|+.-...+.+.+++. ...+|.+|.
T Consensus 81 iVI~tAG~~~~~---~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsN 129 (325)
T cd01336 81 VAILVGAMPRKE---GMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGN 129 (325)
T ss_pred EEEEeCCcCCCC---CCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecC
Confidence 999999986422 1233556788999888888777432 345555553
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic | Back alignment and domain information |
|---|
Probab=98.55 E-value=1.2e-07 Score=83.08 Aligned_cols=104 Identities=13% Similarity=0.156 Sum_probs=69.0
Q ss_pred CCCCCEEEEEcC---------------c-hHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChh
Q 028043 79 ASSSKLVLVAGG---------------S-GGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK 142 (214)
Q Consensus 79 ~~~~k~vlITGa---------------s-ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~ 142 (214)
+++||+++|||| | |.+|.+++++|..+|++|+++.++.... . ... ....|+++.+
T Consensus 182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~------~-~~~--~~~~~v~~~~ 252 (390)
T TIGR00521 182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL------T-PPG--VKSIKVSTAE 252 (390)
T ss_pred ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC------C-CCC--cEEEEeccHH
Confidence 367999999998 3 4599999999999999999988765321 1 122 2457898888
Q ss_pred ccchhh----hCCCcEEEeccCCCCCCC-CCC----CCCCchhHHHHHHHHHHHHHhc
Q 028043 143 DLDPAI----FEGVTHVICCTGTTAFPS-RRW----DGDNTPEKVDWEGVRNLVSALP 191 (214)
Q Consensus 143 ~v~~~~----~~~~d~li~~Ag~~~~~~-~~~----~~~~~~~~vNv~g~~~l~~a~~ 191 (214)
++.+++ ++++|++|||||+..+.. ... ......+.+|+.-+-.+++.++
T Consensus 253 ~~~~~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~ 310 (390)
T TIGR00521 253 EMLEAALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVR 310 (390)
T ss_pred HHHHHHHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHH
Confidence 773222 357999999999986522 111 1111123455555656666553
|
This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity. |
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=98.52 E-value=6.6e-07 Score=67.21 Aligned_cols=79 Identities=25% Similarity=0.321 Sum_probs=61.1
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCe-EEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEE
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVI 156 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li 156 (214)
.++.+++++|.|| ||+|+.++..|.+.|++ |+++.|+.++++++.+.+.+..+.++. +.+ +.. ...+.|+||
T Consensus 8 ~~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~--~~~---~~~-~~~~~DivI 80 (135)
T PF01488_consen 8 GDLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIP--LED---LEE-ALQEADIVI 80 (135)
T ss_dssp STGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEE--GGG---HCH-HHHTESEEE
T ss_pred CCcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceee--HHH---HHH-HHhhCCeEE
Confidence 3567899999996 99999999999999997 999999999999988777444454443 333 333 356799999
Q ss_pred eccCCCC
Q 028043 157 CCTGTTA 163 (214)
Q Consensus 157 ~~Ag~~~ 163 (214)
++.+...
T Consensus 81 ~aT~~~~ 87 (135)
T PF01488_consen 81 NATPSGM 87 (135)
T ss_dssp E-SSTTS
T ss_pred EecCCCC
Confidence 9988764
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.51 E-value=1.7e-07 Score=76.35 Aligned_cols=125 Identities=19% Similarity=0.238 Sum_probs=92.8
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhH-----HHHHhcc---cCCCCEEEEEecCCChhccchhhh-CCC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-----ATTLFGK---QDEETLQVCKGDTRNPKDLDPAIF-EGV 152 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~-----~~~~~~~---~~~~~~~~v~~Di~d~~~v~~~~~-~~~ 152 (214)
.|+.||||-+|.=|+.+++.|+.+|++|.++.|+.+. .+.+... ..+.......+|++|...+.+.+- -.+
T Consensus 28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ikP 107 (376)
T KOG1372|consen 28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIKP 107 (376)
T ss_pred ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccCc
Confidence 3689999999999999999999999999999887554 3333211 113456778899999998887432 268
Q ss_pred cEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc----CCCeEEEEccccccc
Q 028043 153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS----SLKRIVLVSSVGVTK 207 (214)
Q Consensus 153 d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~----~~~~iV~vSS~~~~~ 207 (214)
+-++|.|+.+++. ..++-++..-++...|+..+++|.+. ..-|+-..|+.--||
T Consensus 108 tEiYnLaAQSHVk-vSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyG 165 (376)
T KOG1372|consen 108 TEVYNLAAQSHVK-VSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYG 165 (376)
T ss_pred hhhhhhhhhcceE-EEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcc
Confidence 9999999998843 23344445568888999999998842 223677778777776
|
|
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.50 E-value=4e-07 Score=78.34 Aligned_cols=74 Identities=20% Similarity=0.263 Sum_probs=57.0
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHC-C-CeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEE
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSR-N-IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVI 156 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~-G-~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li 156 (214)
++.+|+|+||||+|.||+.++++|+++ | .+++++.|+.+++.++..++. .+|+.+ +.+ .+.++|+||
T Consensus 152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~-------~~~i~~---l~~-~l~~aDiVv 220 (340)
T PRK14982 152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELG-------GGKILS---LEE-ALPEADIVV 220 (340)
T ss_pred CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhc-------cccHHh---HHH-HHccCCEEE
Confidence 567899999999999999999999864 5 589999999888877654432 234433 333 367899999
Q ss_pred eccCCCC
Q 028043 157 CCTGTTA 163 (214)
Q Consensus 157 ~~Ag~~~ 163 (214)
|+++...
T Consensus 221 ~~ts~~~ 227 (340)
T PRK14982 221 WVASMPK 227 (340)
T ss_pred ECCcCCc
Confidence 9999743
|
|
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.50 E-value=1.1e-06 Score=75.02 Aligned_cols=116 Identities=23% Similarity=0.234 Sum_probs=74.5
Q ss_pred CEEEEEcCchHHHHHHHHHHHH---CCCeEEEEEcChhHHHHHhcccCC-CCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 83 KLVLVAGGSGGVGQLVVASLLS---RNIKSRLLLRDPEKATTLFGKQDE-ETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~---~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
|+|+|.||+|+||++++..|.. .++.+++++|++.. +...-.+.. .....+.+ .+.+++.+ .+.++|+||.+
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~-~g~alDl~~~~~~~~i~~--~~~~d~~~-~l~~~DiVIit 76 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVT-PGVAVDLSHIPTAVKIKG--FSGEDPTP-ALEGADVVLIS 76 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCC-cceehhhhcCCCCceEEE--eCCCCHHH-HcCCCCEEEEc
Confidence 5899999999999999998854 34578888987532 110001111 11112222 22233333 24679999999
Q ss_pred cCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccccc
Q 028043 159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGV 205 (214)
Q Consensus 159 Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~ 205 (214)
+|..+.+. ..-.+.+..|......++++++ .+.+++|.+.|--+
T Consensus 77 aG~~~~~~---~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvsNP~ 121 (312)
T PRK05086 77 AGVARKPG---MDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIITNPV 121 (312)
T ss_pred CCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCch
Confidence 99865322 2334567889999999999985 46777877777533
|
|
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.48 E-value=1.6e-07 Score=75.59 Aligned_cols=106 Identities=22% Similarity=0.207 Sum_probs=79.3
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCC---eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhC--CCcEEE
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNI---KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVI 156 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~--~~d~li 156 (214)
+|+|+|||++|-+|++|.+.+...|. +.+..+. -.+|+++.++.+. +|. ++..||
T Consensus 1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s-------------------kd~DLt~~a~t~~-lF~~ekPthVI 60 (315)
T KOG1431|consen 1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS-------------------KDADLTNLADTRA-LFESEKPTHVI 60 (315)
T ss_pred CceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc-------------------ccccccchHHHHH-HHhccCCceee
Confidence 47899999999999999999988776 2222111 2378999888886 454 689999
Q ss_pred eccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHh-ccCCCeEEEEccccccc
Q 028043 157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-PSSLKRIVLVSSVGVTK 207 (214)
Q Consensus 157 ~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~-~~~~~~iV~vSS~~~~~ 207 (214)
|.|+....--.......+++..|+.-.-|++..+ ..+++++|+..|.+.|.
T Consensus 61 hlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfP 112 (315)
T KOG1431|consen 61 HLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFP 112 (315)
T ss_pred ehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecC
Confidence 9998765211223345667788888888888866 67999999999988875
|
|
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=98.40 E-value=1.2e-06 Score=78.23 Aligned_cols=77 Identities=21% Similarity=0.244 Sum_probs=58.4
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh-hHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP-EKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
.+++|+|+|+|+++ +|.++++.|+++|++|++.+++. +..++..+++...++.++.+|..+. ..+++|+||+
T Consensus 2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~~------~~~~~d~vv~ 74 (450)
T PRK14106 2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVLGEYPEE------FLEGVDLVVV 74 (450)
T ss_pred CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcchh------HhhcCCEEEE
Confidence 35689999999877 99999999999999999999975 3343333333333566777888761 2467999999
Q ss_pred ccCCC
Q 028043 158 CTGTT 162 (214)
Q Consensus 158 ~Ag~~ 162 (214)
++|..
T Consensus 75 ~~g~~ 79 (450)
T PRK14106 75 SPGVP 79 (450)
T ss_pred CCCCC
Confidence 99975
|
|
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.34 E-value=5.3e-07 Score=73.08 Aligned_cols=121 Identities=13% Similarity=0.112 Sum_probs=86.3
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHH-CCCe-EEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhh-CCCcEEEe
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLS-RNIK-SRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-EGVTHVIC 157 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~-~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~-~~~d~li~ 157 (214)
+-.+|||||+-|.+|..+|..|.. .|.+ |++.+..... +.+. ..-.++..|+.|...+++.+. .++|.+||
T Consensus 43 ~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp-~~V~-----~~GPyIy~DILD~K~L~eIVVn~RIdWL~H 116 (366)
T KOG2774|consen 43 KAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPP-ANVT-----DVGPYIYLDILDQKSLEEIVVNKRIDWLVH 116 (366)
T ss_pred CCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCc-hhhc-----ccCCchhhhhhccccHHHhhcccccceeee
Confidence 345899999999999999999976 4765 6655543221 1221 112367789999999987554 47999999
Q ss_pred ccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEEccccccccC
Q 028043 158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 158 ~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~vSS~~~~~~~ 209 (214)
..+....- . ..+..-..++|+.|..|+++.+++..-++..-|+++++|+.
T Consensus 117 fSALLSAv-G-E~NVpLA~~VNI~GvHNil~vAa~~kL~iFVPSTIGAFGPt 166 (366)
T KOG2774|consen 117 FSALLSAV-G-ETNVPLALQVNIRGVHNILQVAAKHKLKVFVPSTIGAFGPT 166 (366)
T ss_pred HHHHHHHh-c-ccCCceeeeecchhhhHHHHHHHHcCeeEeecccccccCCC
Confidence 88764311 1 12333456899999999999887666678888999999864
|
|
| >KOG2733 consensus Uncharacterized membrane protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.17 E-value=2.3e-06 Score=73.02 Aligned_cols=80 Identities=21% Similarity=0.342 Sum_probs=66.9
Q ss_pred EEEEEcCchHHHHHHHHHHHH----CCCeEEEEEcChhHHHHHhcccC---C---CCEEEEEecCCChhccchhhhCCCc
Q 028043 84 LVLVAGGSGGVGQLVVASLLS----RNIKSRLLLRDPEKATTLFGKQD---E---ETLQVCKGDTRNPKDLDPAIFEGVT 153 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~----~G~~V~~~~r~~~~~~~~~~~~~---~---~~~~~v~~Di~d~~~v~~~~~~~~d 153 (214)
-++|-||+|+-|..+++++.+ .|..+-+.+|+++++++..+... + ....++.+|.+|++++.+ +..+..
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~e-mak~~~ 85 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDE-MAKQAR 85 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHH-HHhhhE
Confidence 489999999999999999999 78899999999999988755433 1 122378899999999997 467899
Q ss_pred EEEeccCCCCC
Q 028043 154 HVICCTGTTAF 164 (214)
Q Consensus 154 ~li~~Ag~~~~ 164 (214)
+|+||+|....
T Consensus 86 vivN~vGPyR~ 96 (423)
T KOG2733|consen 86 VIVNCVGPYRF 96 (423)
T ss_pred EEEecccccee
Confidence 99999998653
|
|
| >cd00704 MDH Malate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.16 E-value=1.6e-05 Score=68.24 Aligned_cols=102 Identities=17% Similarity=0.161 Sum_probs=68.9
Q ss_pred EEEEEcCchHHHHHHHHHHHHCCC-------eEEEEEcCh--hHHHHHhcccCCCCEEEEEecCCCh-----------hc
Q 028043 84 LVLVAGGSGGVGQLVVASLLSRNI-------KSRLLLRDP--EKATTLFGKQDEETLQVCKGDTRNP-----------KD 143 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~v~~Di~d~-----------~~ 143 (214)
+|.||||+|.||+.++..|+..|. +++++++++ +.++ ....|+.|. ..
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~------------g~~~Dl~d~~~~~~~~~~i~~~ 69 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALE------------GVVMELQDCAFPLLKGVVITTD 69 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccc------------eeeeehhhhcccccCCcEEecC
Confidence 689999999999999999998653 599999976 3222 223344333 12
Q ss_pred cchhhhCCCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccC--C-CeEEEEc
Q 028043 144 LDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSS--L-KRIVLVS 201 (214)
Q Consensus 144 v~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~--~-~~iV~vS 201 (214)
..+ .+.++|+||+.||....+. ++-.+.+..|+.-...+.+.+++. . ..+|.+|
T Consensus 70 ~~~-~~~~aDiVVitAG~~~~~g---~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvs 126 (323)
T cd00704 70 PEE-AFKDVDVAILVGAFPRKPG---MERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVG 126 (323)
T ss_pred hHH-HhCCCCEEEEeCCCCCCcC---CcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 222 3678999999999865322 233456688988888888887432 3 3455554
|
Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] | Back alignment and domain information |
|---|
Probab=98.14 E-value=6.2e-05 Score=56.93 Aligned_cols=110 Identities=14% Similarity=0.138 Sum_probs=71.8
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCC--eEEEEEcChhHHHHHhcccC----CCCEEEEEecCCChhccchhhhCCCcEEE
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAIFEGVTHVI 156 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~----~~~~~~v~~Di~d~~~v~~~~~~~~d~li 156 (214)
++|.|.||+|.+|++++..|...+. ++++++++++.++....++. .......... .+.++ +.+.|++|
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~-~~~~~-----~~~aDivv 74 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS-GDYEA-----LKDADIVV 74 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE-SSGGG-----GTTESEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc-ccccc-----cccccEEE
Confidence 5799999999999999999998864 79999999876554322221 1112221111 33332 45789999
Q ss_pred eccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CC-CeEEEEc
Q 028043 157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL-KRIVLVS 201 (214)
Q Consensus 157 ~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~-~~iV~vS 201 (214)
..||....+. +.-.+.+..|..-...+.+.+.+ .. ..++.+|
T Consensus 75 itag~~~~~g---~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvt 118 (141)
T PF00056_consen 75 ITAGVPRKPG---MSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVT 118 (141)
T ss_dssp ETTSTSSSTT---SSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-S
T ss_pred Eecccccccc---ccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeC
Confidence 9999865322 23345567888888888887743 33 3455554
|
L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C .... |
| >TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=98.13 E-value=1.8e-05 Score=67.99 Aligned_cols=104 Identities=15% Similarity=0.091 Sum_probs=69.1
Q ss_pred EEEEEcCchHHHHHHHHHHHHCCC-------eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChh-----------ccc
Q 028043 84 LVLVAGGSGGVGQLVVASLLSRNI-------KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK-----------DLD 145 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~-----------~v~ 145 (214)
+|.|+||+|.||+.++..|+..|. +++++++++... ..+....|+.|.. +..
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~----------~a~g~~~Dl~d~~~~~~~~~~~~~~~~ 70 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK----------VLEGVVMELMDCAFPLLDGVVPTHDPA 70 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc----------ccceeEeehhcccchhcCceeccCChH
Confidence 489999999999999999988554 599999865421 0112233444333 212
Q ss_pred hhhhCCCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccC--C-CeEEEEc
Q 028043 146 PAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSS--L-KRIVLVS 201 (214)
Q Consensus 146 ~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~--~-~~iV~vS 201 (214)
+ .+.+.|+||+.||....+ .++..+.+..|+.-...+.+.+++. . ..+|.+|
T Consensus 71 ~-~~~~aDiVVitAG~~~~~---~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvs 125 (324)
T TIGR01758 71 V-AFTDVDVAILVGAFPRKE---GMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVG 125 (324)
T ss_pred H-HhCCCCEEEEcCCCCCCC---CCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence 2 367899999999986422 2233556788999999999888442 3 4555555
|
This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography |
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.13 E-value=1.5e-05 Score=60.72 Aligned_cols=76 Identities=24% Similarity=0.211 Sum_probs=55.3
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCC-CeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
.++++++|+|+ |++|+.+++.|++.| ++|.+.+|++++.+++.+.+.... +..+..+.+++ .+++|+||++
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~~----~~~~Dvvi~~ 88 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG---IAIAYLDLEEL----LAEADLIINT 88 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc---cceeecchhhc----cccCCEEEeC
Confidence 35689999997 899999999999996 789999999988777655432111 22334443322 4679999999
Q ss_pred cCCCC
Q 028043 159 TGTTA 163 (214)
Q Consensus 159 Ag~~~ 163 (214)
.....
T Consensus 89 ~~~~~ 93 (155)
T cd01065 89 TPVGM 93 (155)
T ss_pred cCCCC
Confidence 98654
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.08 E-value=1.9e-05 Score=64.44 Aligned_cols=76 Identities=25% Similarity=0.392 Sum_probs=63.6
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccCC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGT 161 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag~ 161 (214)
|+++|.| .|-+|+.+|+.|.+.|++|+++++++++.++.... ......+.+|-+|++.++++-....|+++-.-|.
T Consensus 1 m~iiIiG-~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~--~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~ 76 (225)
T COG0569 1 MKIIIIG-AGRVGRSVARELSEEGHNVVLIDRDEERVEEFLAD--ELDTHVVIGDATDEDVLEEAGIDDADAVVAATGN 76 (225)
T ss_pred CEEEEEC-CcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh--hcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCC
Confidence 5688888 78999999999999999999999999998774321 2357889999999999998656789999977764
|
|
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=98.05 E-value=2.2e-05 Score=56.89 Aligned_cols=71 Identities=30% Similarity=0.439 Sum_probs=58.5
Q ss_pred EEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 85 vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
|+|.|. |.+|+.+++.|.+.+.+|++++++++..+++.+ .++.++.+|.+|++.++++-..+.+.+|-...
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~----~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~ 71 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELRE----EGVEVIYGDATDPEVLERAGIEKADAVVILTD 71 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHH----TTSEEEES-TTSHHHHHHTTGGCESEEEEESS
T ss_pred eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHh----cccccccccchhhhHHhhcCccccCEEEEccC
Confidence 578885 689999999999987799999999998877653 34789999999999999866678998887764
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=98.04 E-value=3e-05 Score=65.16 Aligned_cols=77 Identities=21% Similarity=0.246 Sum_probs=55.8
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCC-CeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
...+|+++|+|+ ||+|+++++.|++.| .+|++++|+.++.+++.+.+.... .+..+. +..+ ...+.|+|||
T Consensus 120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~--~~~~~~----~~~~-~~~~~DivIn 191 (278)
T PRK00258 120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALG--KAELDL----ELQE-ELADFDLIIN 191 (278)
T ss_pred CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc--ceeecc----cchh-ccccCCEEEE
Confidence 356789999996 999999999999999 689999999998888766543211 011111 1122 2467899999
Q ss_pred ccCCCC
Q 028043 158 CTGTTA 163 (214)
Q Consensus 158 ~Ag~~~ 163 (214)
+.....
T Consensus 192 aTp~g~ 197 (278)
T PRK00258 192 ATSAGM 197 (278)
T ss_pred CCcCCC
Confidence 987654
|
|
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=97.97 E-value=1.7e-05 Score=65.91 Aligned_cols=75 Identities=13% Similarity=0.187 Sum_probs=57.0
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhh-CCCcEEEeccCC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-EGVTHVICCTGT 161 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~-~~~d~li~~Ag~ 161 (214)
|+|+|+||||. |+.++++|.+.|++|++..+++...+.+. ..+...+..+..|.+++.+.+- .++|+||+.+..
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~----~~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtHP 75 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYP----IHQALTVHTGALDPQELREFLKRHSIDILVDATHP 75 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcccccc----ccCCceEEECCCCHHHHHHHHHhcCCCEEEEcCCH
Confidence 57999999998 99999999999999999999887554433 1223345566777787766432 369999999876
Q ss_pred C
Q 028043 162 T 162 (214)
Q Consensus 162 ~ 162 (214)
.
T Consensus 76 f 76 (256)
T TIGR00715 76 F 76 (256)
T ss_pred H
Confidence 4
|
This enzyme was found to be a monomer by gel filtration. |
| >PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism | Back alignment and domain information |
|---|
Probab=97.96 E-value=3e-05 Score=61.38 Aligned_cols=76 Identities=17% Similarity=0.309 Sum_probs=47.5
Q ss_pred CCCCEEEEEcC----------------chHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhc
Q 028043 80 SSSKLVLVAGG----------------SGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD 143 (214)
Q Consensus 80 ~~~k~vlITGa----------------sggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~ 143 (214)
++||+||||+| ||..|.++|+++..+|++|+++..... .+. ..++..+. +...++
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~~------p~~~~~i~--v~sa~e 71 (185)
T PF04127_consen 1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LPP------PPGVKVIR--VESAEE 71 (185)
T ss_dssp -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS-----------TTEEEEE---SSHHH
T ss_pred CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-ccc------cccceEEE--ecchhh
Confidence 36788888865 589999999999999999999987642 211 23455444 555555
Q ss_pred cchhh---hCCCcEEEeccCCCCC
Q 028043 144 LDPAI---FEGVTHVICCTGTTAF 164 (214)
Q Consensus 144 v~~~~---~~~~d~li~~Ag~~~~ 164 (214)
+.+++ +...|++|++|++..+
T Consensus 72 m~~~~~~~~~~~Di~I~aAAVsDf 95 (185)
T PF04127_consen 72 MLEAVKELLPSADIIIMAAAVSDF 95 (185)
T ss_dssp HHHHHHHHGGGGSEEEE-SB--SE
T ss_pred hhhhhccccCcceeEEEecchhhe
Confidence 54433 4568999999999874
|
These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A. |
| >PRK00066 ldh L-lactate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.95 E-value=6.3e-05 Score=64.41 Aligned_cols=110 Identities=14% Similarity=0.166 Sum_probs=72.8
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC--eEEEEEcChhHHHHHhcccCC-----CCEEEEEecCCChhccchhhhCCC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDE-----ETLQVCKGDTRNPKDLDPAIFEGV 152 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~-----~~~~~v~~Di~d~~~v~~~~~~~~ 152 (214)
..+++|.|+|+ |.||..++..|+..|. ++.+++++++.++.....+.. .++... . .+ .+ .+.+.
T Consensus 4 ~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~-~--~~---~~--~~~~a 74 (315)
T PRK00066 4 KQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY-A--GD---YS--DCKDA 74 (315)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE-e--CC---HH--HhCCC
Confidence 35679999998 9999999999999887 799999988766543332221 122211 1 12 22 25689
Q ss_pred cEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-C-CCeEEEEc
Q 028043 153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-LKRIVLVS 201 (214)
Q Consensus 153 d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~-~~~iV~vS 201 (214)
|++|..||....+. ++-.+.+..|..-...+++.+++ . ...++.+|
T Consensus 75 divIitag~~~k~g---~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvs 122 (315)
T PRK00066 75 DLVVITAGAPQKPG---ETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVAS 122 (315)
T ss_pred CEEEEecCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 99999999865332 23345567788888887777643 3 34555555
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=97.93 E-value=4.6e-05 Score=68.03 Aligned_cols=74 Identities=22% Similarity=0.291 Sum_probs=61.2
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
|+|+|.|+ |.+|+++++.|.+.|++|++++++++..+++.+ ..++.++.+|.++.+.++++-..++|.+|.+..
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~---~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~~ 74 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQD---RLDVRTVVGNGSSPDVLREAGAEDADLLIAVTD 74 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHh---hcCEEEEEeCCCCHHHHHHcCCCcCCEEEEecC
Confidence 47999997 999999999999999999999999988777643 135788999999988887643567888887664
|
|
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=97.93 E-value=5.8e-05 Score=63.13 Aligned_cols=74 Identities=22% Similarity=0.242 Sum_probs=54.3
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCC-EEEEEecCCChhccchhhhCCCcEEEecc
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEET-LQVCKGDTRNPKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~v~~Di~d~~~v~~~~~~~~d~li~~A 159 (214)
.+|+++|+|+ ||+|++++..|++.|++|++++|++++.+++.+.+.... ... .+..+ ....+.|+|||+.
T Consensus 116 ~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~--~~~~~------~~~~~~DivInat 186 (270)
T TIGR00507 116 PNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQA--FSMDE------LPLHRVDLIINAT 186 (270)
T ss_pred cCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEE--echhh------hcccCccEEEECC
Confidence 5689999997 799999999999999999999999988877765543211 121 11111 1134689999999
Q ss_pred CCCC
Q 028043 160 GTTA 163 (214)
Q Consensus 160 g~~~ 163 (214)
+...
T Consensus 187 p~gm 190 (270)
T TIGR00507 187 SAGM 190 (270)
T ss_pred CCCC
Confidence 8753
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.92 E-value=4.1e-05 Score=70.00 Aligned_cols=76 Identities=20% Similarity=0.171 Sum_probs=54.4
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
.+.+|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+.+.. .. .++.+ ..+......|+|||+
T Consensus 376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~~---~~--~~~~~---~~~~~~~~~diiINt 446 (529)
T PLN02520 376 PLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAVGG---QA--LTLAD---LENFHPEEGMILANT 446 (529)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCC---ce--eeHhH---hhhhccccCeEEEec
Confidence 456899999998 7999999999999999999999999888887655421 11 12222 121111246889988
Q ss_pred cCCCC
Q 028043 159 TGTTA 163 (214)
Q Consensus 159 Ag~~~ 163 (214)
.....
T Consensus 447 T~vGm 451 (529)
T PLN02520 447 TSVGM 451 (529)
T ss_pred ccCCC
Confidence 87654
|
|
| >PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=97.89 E-value=3.8e-05 Score=68.56 Aligned_cols=78 Identities=19% Similarity=0.155 Sum_probs=51.8
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhC-CCcEEEe
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-GVTHVIC 157 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~-~~d~li~ 157 (214)
++.+|+++|||+++ +|.++++.|++.|++|++.+++........+.+...++.+..++. ...+ .. ++|+||+
T Consensus 2 ~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~~--~~~~----~~~~~d~vV~ 74 (447)
T PRK02472 2 EYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVICGSH--PLEL----LDEDFDLMVK 74 (447)
T ss_pred CcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEEeCCC--CHHH----hcCcCCEEEE
Confidence 35689999999876 999999999999999999998653322221222222344433321 1111 22 4899999
Q ss_pred ccCCCC
Q 028043 158 CTGTTA 163 (214)
Q Consensus 158 ~Ag~~~ 163 (214)
++|+..
T Consensus 75 s~gi~~ 80 (447)
T PRK02472 75 NPGIPY 80 (447)
T ss_pred CCCCCC
Confidence 999864
|
|
| >cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00013 Score=62.21 Aligned_cols=107 Identities=15% Similarity=0.156 Sum_probs=71.1
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCC--CeEEEEEcChhHHHHHhcccC------CCCEEEEEecCCChhccchhhhCCCcE
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQD------EETLQVCKGDTRNPKDLDPAIFEGVTH 154 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~------~~~~~~v~~Di~d~~~v~~~~~~~~d~ 154 (214)
++|.|.|+ |++|+.++..|+..| .+|++++|++++.+.....+. ....... . .+.+ .+.+.|+
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~-~--~~~~-----~l~~aDI 71 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK-A--GDYS-----DCKDADI 71 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE-c--CCHH-----HhCCCCE
Confidence 47899995 999999999999999 589999999887765544331 1112221 1 2222 2468999
Q ss_pred EEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-C-CCeEEEEc
Q 028043 155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-LKRIVLVS 201 (214)
Q Consensus 155 li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~-~~~iV~vS 201 (214)
+|+++|....+. ++-.+.+..|..-...+.+.+++ . ...++.+|
T Consensus 72 VIitag~~~~~g---~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvs 117 (306)
T cd05291 72 VVITAGAPQKPG---ETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVAS 117 (306)
T ss_pred EEEccCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEec
Confidence 999999764322 23344567788888888887743 2 34555555
|
L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine |
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=97.83 E-value=9.7e-05 Score=65.93 Aligned_cols=78 Identities=26% Similarity=0.383 Sum_probs=64.2
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEecc
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~A 159 (214)
...++++|.|+ |.+|+.+++.|.+.|++|++++++++..+++.+.. .++.++.+|.++++.++++-..+.|.+|.+.
T Consensus 229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~--~~~~~i~gd~~~~~~L~~~~~~~a~~vi~~~ 305 (453)
T PRK09496 229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEEL--PNTLVLHGDGTDQELLEEEGIDEADAFIALT 305 (453)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHC--CCCeEEECCCCCHHHHHhcCCccCCEEEECC
Confidence 34689999996 99999999999999999999999998877765432 3467899999999988775567888888654
Q ss_pred C
Q 028043 160 G 160 (214)
Q Consensus 160 g 160 (214)
.
T Consensus 306 ~ 306 (453)
T PRK09496 306 N 306 (453)
T ss_pred C
Confidence 4
|
|
| >cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.82 E-value=8.9e-05 Score=59.38 Aligned_cols=71 Identities=18% Similarity=0.093 Sum_probs=51.5
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
.++++|+++|+|. |.+|+.+++.|.+.|++|++.++++++.+++.+.+. ... +|. +++. ..++|+++.
T Consensus 24 ~~l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g---~~~--v~~---~~l~---~~~~Dv~vp 91 (200)
T cd01075 24 DSLEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFG---ATV--VAP---EEIY---SVDADVFAP 91 (200)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcC---CEE--Ecc---hhhc---cccCCEEEe
Confidence 3468899999996 689999999999999999999999988777654331 221 121 1111 126888887
Q ss_pred ccC
Q 028043 158 CTG 160 (214)
Q Consensus 158 ~Ag 160 (214)
+|.
T Consensus 92 ~A~ 94 (200)
T cd01075 92 CAL 94 (200)
T ss_pred ccc
Confidence 775
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc |
| >cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity | Back alignment and domain information |
|---|
Probab=97.81 E-value=8.2e-05 Score=63.54 Aligned_cols=112 Identities=20% Similarity=0.189 Sum_probs=69.3
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCe--EEEEEcCh--hHHHHHhcccCC----CCEEEEEecCCChhccchhhhCCCcE
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIK--SRLLLRDP--EKATTLFGKQDE----ETLQVCKGDTRNPKDLDPAIFEGVTH 154 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~--V~~~~r~~--~~~~~~~~~~~~----~~~~~v~~Di~d~~~v~~~~~~~~d~ 154 (214)
|+|.|+||+|.+|..++..|+..|.. |++++|++ ++++.....+.. .... .....+ .+.+ .+.+.|+
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~-~~i~~~--~d~~--~l~~aDi 75 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGID-AEIKIS--SDLS--DVAGSDI 75 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCC-cEEEEC--CCHH--HhCCCCE
Confidence 57999999999999999999999874 99999954 333221111110 0000 011111 1122 2568999
Q ss_pred EEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc--CCCeEEEEcc
Q 028043 155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS--SLKRIVLVSS 202 (214)
Q Consensus 155 li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~--~~~~iV~vSS 202 (214)
+|.++|....+. ++-.+....|+.-...+++.+.+ ....+|.+++
T Consensus 76 Viitag~p~~~~---~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~n 122 (309)
T cd05294 76 VIITAGVPRKEG---MSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTN 122 (309)
T ss_pred EEEecCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 999999754221 12234557788888888887743 2346777765
|
The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox |
| >PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.0001 Score=64.68 Aligned_cols=103 Identities=22% Similarity=0.287 Sum_probs=68.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHC-CCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEecc
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~A 159 (214)
+.++|.|.||||.+|+++++.|.++ +.+|..+.++.+..+.+... .......|+.+.++++...+.++|+||.+.
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~----~~~l~~~~~~~~~~~~~~~~~~~DvVf~Al 112 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGSV----FPHLITQDLPNLVAVKDADFSDVDAVFCCL 112 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhh----CccccCccccceecCCHHHhcCCCEEEEcC
Confidence 4468999999999999999999988 67899988865543322211 111233455545555543357899999877
Q ss_pred CCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEEccccccc
Q 028043 160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTK 207 (214)
Q Consensus 160 g~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~vSS~~~~~ 207 (214)
+.. ....++++++.+ .+||-+|+..-+.
T Consensus 113 p~~-------------------~s~~i~~~~~~g-~~VIDlSs~fRl~ 140 (381)
T PLN02968 113 PHG-------------------TTQEIIKALPKD-LKIVDLSADFRLR 140 (381)
T ss_pred CHH-------------------HHHHHHHHHhCC-CEEEEcCchhccC
Confidence 521 344555555433 6788888876543
|
|
| >COG3268 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.66 E-value=7.7e-05 Score=63.37 Aligned_cols=77 Identities=19% Similarity=0.240 Sum_probs=62.7
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccCCC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT 162 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag~~ 162 (214)
..++|-||+|+.|.-++++|+.+|.+-.+.+|+..+++.+...+. .++. ..++-+++.+++ +..+.++|+||+|..
T Consensus 7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG-~~~~--~~p~~~p~~~~~-~~~~~~VVlncvGPy 82 (382)
T COG3268 7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLG-PEAA--VFPLGVPAALEA-MASRTQVVLNCVGPY 82 (382)
T ss_pred eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcC-cccc--ccCCCCHHHHHH-HHhcceEEEeccccc
Confidence 579999999999999999999999999999999999998776653 3333 334444777775 568899999999976
Q ss_pred C
Q 028043 163 A 163 (214)
Q Consensus 163 ~ 163 (214)
.
T Consensus 83 t 83 (382)
T COG3268 83 T 83 (382)
T ss_pred c
Confidence 4
|
|
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00043 Score=59.84 Aligned_cols=78 Identities=24% Similarity=0.281 Sum_probs=53.4
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChh---------------------HHHHHhccc----CCCCEE
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPE---------------------KATTLFGKQ----DEETLQ 132 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~---------------------~~~~~~~~~----~~~~~~ 132 (214)
.+++++|+|.| .||+|+++++.|+..|. +++++|++.- +.+.+++.+ ....++
T Consensus 21 ~L~~~~VlIiG-~GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~ 99 (338)
T PRK12475 21 KIREKHVLIVG-AGALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIV 99 (338)
T ss_pred hhcCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEE
Confidence 35678999999 58899999999999998 7888988741 122221211 233456
Q ss_pred EEEecCCChhccchhhhCCCcEEEecc
Q 028043 133 VCKGDTRNPKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 133 ~v~~Di~d~~~v~~~~~~~~d~li~~A 159 (214)
.+..|++ .+.+++ ++.+.|+||.+.
T Consensus 100 ~~~~~~~-~~~~~~-~~~~~DlVid~~ 124 (338)
T PRK12475 100 PVVTDVT-VEELEE-LVKEVDLIIDAT 124 (338)
T ss_pred EEeccCC-HHHHHH-HhcCCCEEEEcC
Confidence 6667775 344554 467899998776
|
|
| >PRK10669 putative cation:proton antiport protein; Provisional | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00014 Score=66.98 Aligned_cols=73 Identities=18% Similarity=0.252 Sum_probs=61.3
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
.+++|.| .|.+|++++++|.++|++|++++.|+++.++..+ .+...+.+|.+|++.++++-.++.|.++-..+
T Consensus 418 ~hiiI~G-~G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~----~g~~~i~GD~~~~~~L~~a~i~~a~~viv~~~ 490 (558)
T PRK10669 418 NHALLVG-YGRVGSLLGEKLLAAGIPLVVIETSRTRVDELRE----RGIRAVLGNAANEEIMQLAHLDCARWLLLTIP 490 (558)
T ss_pred CCEEEEC-CChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----CCCeEEEcCCCCHHHHHhcCccccCEEEEEcC
Confidence 4688888 7999999999999999999999999998887653 35788999999999998765668887775543
|
|
| >COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00022 Score=60.07 Aligned_cols=78 Identities=22% Similarity=0.231 Sum_probs=55.9
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
.++++++|.| +||.+++++..|++.|. +|+++.|+.++.+++.+.+..........+..+.+..+ ..|+|||+
T Consensus 124 ~~~~~vlilG-AGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~~~~-----~~dliINa 197 (283)
T COG0169 124 VTGKRVLILG-AGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALADLEGLE-----EADLLINA 197 (283)
T ss_pred cCCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccccccccccc-----ccCEEEEC
Confidence 3579999999 79999999999999995 79999999999998876665322111112222222221 57999998
Q ss_pred cCCCC
Q 028043 159 TGTTA 163 (214)
Q Consensus 159 Ag~~~ 163 (214)
-....
T Consensus 198 Tp~Gm 202 (283)
T COG0169 198 TPVGM 202 (283)
T ss_pred CCCCC
Confidence 87654
|
|
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00021 Score=63.37 Aligned_cols=76 Identities=21% Similarity=0.236 Sum_probs=57.3
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
++.+|+|+|.|+ |++|+.+++.|++.|. +++++.|+.++.+++.+.+.. ... ...+++.. .+...|+||+
T Consensus 178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~--~~~-----~~~~~l~~-~l~~aDiVI~ 248 (414)
T PRK13940 178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRN--ASA-----HYLSELPQ-LIKKADIIIA 248 (414)
T ss_pred CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcC--CeE-----ecHHHHHH-HhccCCEEEE
Confidence 457899999995 9999999999999996 699999999988887765531 111 12233333 3567999999
Q ss_pred ccCCCC
Q 028043 158 CTGTTA 163 (214)
Q Consensus 158 ~Ag~~~ 163 (214)
+.+..+
T Consensus 249 aT~a~~ 254 (414)
T PRK13940 249 AVNVLE 254 (414)
T ss_pred CcCCCC
Confidence 998755
|
|
| >PRK12549 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00029 Score=59.45 Aligned_cols=73 Identities=22% Similarity=0.363 Sum_probs=52.5
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCC--CCEEEEEecCCChhccchhhhCCCcEEE
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDE--ETLQVCKGDTRNPKDLDPAIFEGVTHVI 156 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~--~~~~~v~~Di~d~~~v~~~~~~~~d~li 156 (214)
..+|+|+|.| +||.|++++..|++.|. +|++++|+.++.+.+.+.+.. ....+.. . +++.+ .+.+.|+||
T Consensus 125 ~~~k~vlIlG-aGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~--~---~~~~~-~~~~aDiVI 197 (284)
T PRK12549 125 ASLERVVQLG-AGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATA--G---SDLAA-ALAAADGLV 197 (284)
T ss_pred ccCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEe--c---cchHh-hhCCCCEEE
Confidence 4568999999 58899999999999998 699999999998887655421 1122211 1 22222 245789999
Q ss_pred ecc
Q 028043 157 CCT 159 (214)
Q Consensus 157 ~~A 159 (214)
|+.
T Consensus 198 naT 200 (284)
T PRK12549 198 HAT 200 (284)
T ss_pred ECC
Confidence 994
|
|
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00054 Score=59.27 Aligned_cols=107 Identities=21% Similarity=0.233 Sum_probs=66.0
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChh---------------------HHHHHhcc---c-CCCCEEE
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPE---------------------KATTLFGK---Q-DEETLQV 133 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~---------------------~~~~~~~~---~-~~~~~~~ 133 (214)
++.++|+|.|+ ||+|+.+++.|+..|. ++.++|++.- +.+.+.+. + +...++.
T Consensus 22 L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~ 100 (339)
T PRK07688 22 LREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEA 100 (339)
T ss_pred hcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEE
Confidence 45678999995 9999999999999999 7999998631 11111111 1 1223555
Q ss_pred EEecCCChhccchhhhCCCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEEccccccc
Q 028043 134 CKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTK 207 (214)
Q Consensus 134 v~~Di~d~~~v~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~vSS~~~~~ 207 (214)
+..|++. +.+.+ ++.+.|+||.+.. |...-..+.+++......+|+.++.+.+|
T Consensus 101 ~~~~~~~-~~~~~-~~~~~DlVid~~D------------------n~~~r~~ln~~~~~~~iP~i~~~~~g~~G 154 (339)
T PRK07688 101 IVQDVTA-EELEE-LVTGVDLIIDATD------------------NFETRFIVNDAAQKYGIPWIYGACVGSYG 154 (339)
T ss_pred EeccCCH-HHHHH-HHcCCCEEEEcCC------------------CHHHHHHHHHHHHHhCCCEEEEeeeeeee
Confidence 6667653 33443 4677898887742 11222345555644445677766655544
|
|
| >PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00031 Score=63.49 Aligned_cols=73 Identities=15% Similarity=0.265 Sum_probs=53.2
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
.+.+|+++|+|+ ||+|++++..|++.|++|++.+|+.++.+++.+.... . ..+..+ +.. +.+.|+|||+
T Consensus 329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~~---~--~~~~~~---~~~--l~~~DiVIna 397 (477)
T PRK09310 329 PLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASRCQG---K--AFPLES---LPE--LHRIDIIINC 397 (477)
T ss_pred CcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc---c--eechhH---hcc--cCCCCEEEEc
Confidence 346789999995 8999999999999999999999998888776543321 1 122222 221 3568999999
Q ss_pred cCCC
Q 028043 159 TGTT 162 (214)
Q Consensus 159 Ag~~ 162 (214)
....
T Consensus 398 tP~g 401 (477)
T PRK09310 398 LPPS 401 (477)
T ss_pred CCCC
Confidence 8654
|
|
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00043 Score=67.50 Aligned_cols=78 Identities=21% Similarity=0.130 Sum_probs=63.2
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHC-CCe-------------EEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccch
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSR-NIK-------------SRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDP 146 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~-G~~-------------V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~ 146 (214)
++|+|+|.|| |.||+..++.|++. +++ |.+.+++.++++++.+.. ++++.++.|++|.+++.+
T Consensus 568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~--~~~~~v~lDv~D~e~L~~ 644 (1042)
T PLN02819 568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGI--ENAEAVQLDVSDSESLLK 644 (1042)
T ss_pred cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhc--CCCceEEeecCCHHHHHH
Confidence 4789999995 99999999999875 333 888899988888776543 256789999999998886
Q ss_pred hhhCCCcEEEeccCCC
Q 028043 147 AIFEGVTHVICCTGTT 162 (214)
Q Consensus 147 ~~~~~~d~li~~Ag~~ 162 (214)
+ +.++|+||++....
T Consensus 645 ~-v~~~DaVIsalP~~ 659 (1042)
T PLN02819 645 Y-VSQVDVVISLLPAS 659 (1042)
T ss_pred h-hcCCCEEEECCCch
Confidence 3 57799999999763
|
|
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00042 Score=60.64 Aligned_cols=76 Identities=14% Similarity=0.085 Sum_probs=57.6
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEecc
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~A 159 (214)
...++|+|.|+ |.+|+..++.+...|++|++++|++++++.+...+.. .+..+..+.+.+.+. +.+.|+||+++
T Consensus 165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~----~v~~~~~~~~~l~~~-l~~aDvVI~a~ 238 (370)
T TIGR00518 165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGG----RIHTRYSNAYEIEDA-VKRADLLIGAV 238 (370)
T ss_pred CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCc----eeEeccCCHHHHHHH-HccCCEEEEcc
Confidence 34577999986 8999999999999999999999999887765443321 133455666666653 57899999988
Q ss_pred CC
Q 028043 160 GT 161 (214)
Q Consensus 160 g~ 161 (214)
+.
T Consensus 239 ~~ 240 (370)
T TIGR00518 239 LI 240 (370)
T ss_pred cc
Confidence 65
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00034 Score=59.00 Aligned_cols=79 Identities=16% Similarity=0.170 Sum_probs=55.4
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
..+|+++|.| +||.|++++..|++.|. +|+++.|+.++.+++.+.+... ..... +...+++.. .....|+|||+
T Consensus 123 ~~~k~vlvlG-aGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~-~~~~~--~~~~~~~~~-~~~~~DiVIna 197 (282)
T TIGR01809 123 LAGFRGLVIG-AGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQV-GVITR--LEGDSGGLA-IEKAAEVLVST 197 (282)
T ss_pred cCCceEEEEc-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhc-Cccee--ccchhhhhh-cccCCCEEEEC
Confidence 4678999998 59999999999999997 6999999999988877654311 11111 111122222 24578999999
Q ss_pred cCCCC
Q 028043 159 TGTTA 163 (214)
Q Consensus 159 Ag~~~ 163 (214)
.....
T Consensus 198 Tp~g~ 202 (282)
T TIGR01809 198 VPADV 202 (282)
T ss_pred CCCCC
Confidence 87653
|
This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway. |
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00068 Score=54.33 Aligned_cols=78 Identities=19% Similarity=0.291 Sum_probs=50.9
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcCh-------------------hHHHHHhcccC----CCCEEEEE
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDP-------------------EKATTLFGKQD----EETLQVCK 135 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~-------------------~~~~~~~~~~~----~~~~~~v~ 135 (214)
+.+++|+|.| .||+|+++++.|+..|. +++++|++. .+.+.+.+.+. ..+++.+.
T Consensus 19 l~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~ 97 (202)
T TIGR02356 19 LLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALK 97 (202)
T ss_pred hcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEeh
Confidence 4567899999 89999999999999998 799998862 12222222221 22334444
Q ss_pred ecCCChhccchhhhCCCcEEEeccC
Q 028043 136 GDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 136 ~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
.++.+ +.+.+ .+.+.|+||.+..
T Consensus 98 ~~i~~-~~~~~-~~~~~D~Vi~~~d 120 (202)
T TIGR02356 98 ERVTA-ENLEL-LINNVDLVLDCTD 120 (202)
T ss_pred hcCCH-HHHHH-HHhCCCEEEECCC
Confidence 44533 34443 4678999987763
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00047 Score=58.31 Aligned_cols=71 Identities=14% Similarity=0.096 Sum_probs=51.6
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
.+.+++++|.|. |+||+.+++.|...|++|++.+|++++.+...+ .+...+ + .+++.+ .+.+.|+||++
T Consensus 148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~----~g~~~~--~---~~~l~~-~l~~aDiVint 216 (287)
T TIGR02853 148 TIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARITE----MGLIPF--P---LNKLEE-KVAEIDIVINT 216 (287)
T ss_pred CCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----CCCeee--c---HHHHHH-HhccCCEEEEC
Confidence 457899999996 889999999999999999999999876654331 112211 1 233343 35689999997
Q ss_pred cC
Q 028043 159 TG 160 (214)
Q Consensus 159 Ag 160 (214)
..
T Consensus 217 ~P 218 (287)
T TIGR02853 217 IP 218 (287)
T ss_pred CC
Confidence 64
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00053 Score=58.59 Aligned_cols=112 Identities=20% Similarity=0.218 Sum_probs=68.1
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCC--eEEEEEcChhHHHHHhcccCCC--CEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDEE--TLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~--~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
++|.|+|++|.+|+.++..|+..|. ++++++++ +++...-.+... ........ ..+++.+ .+.+.|++|..
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~~~~i~~~~--~~~~~y~-~~~daDivvit 75 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINTPAKVTGYL--GPEELKK-ALKGADVVVIP 75 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCCcceEEEec--CCCchHH-hcCCCCEEEEe
Confidence 4799999999999999999998884 79999987 222111111111 11111110 1112222 25689999999
Q ss_pred cCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-C-CCeEEEEcc
Q 028043 159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-LKRIVLVSS 202 (214)
Q Consensus 159 Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~-~~~iV~vSS 202 (214)
||....|. +.-.+.++.|..-...+.+.+++ . ...+|.+|-
T Consensus 76 aG~~~k~g---~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvtN 118 (310)
T cd01337 76 AGVPRKPG---MTRDDLFNINAGIVRDLATAVAKACPKALILIISN 118 (310)
T ss_pred CCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence 99864322 22344567888888888887743 3 335555553
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >COG2130 Putative NADP-dependent oxidoreductases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00049 Score=57.96 Aligned_cols=106 Identities=19% Similarity=0.219 Sum_probs=71.2
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCCh---hccchhhhCCCcEEE
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP---KDLDPAIFEGVTHVI 156 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~---~~v~~~~~~~~d~li 156 (214)
..|++++|+||+|.+|+-+.+...-+|++|+.++-.+++.+-+.+++.-. ...|..++ +.++++.=+++|+.+
T Consensus 149 k~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD----~~idyk~~d~~~~L~~a~P~GIDvyf 224 (340)
T COG2130 149 KAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFD----AGIDYKAEDFAQALKEACPKGIDVYF 224 (340)
T ss_pred CCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCc----eeeecCcccHHHHHHHHCCCCeEEEE
Confidence 35899999999999998877766668999999999999998877655411 12344333 223333234799999
Q ss_pred eccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHh---ccCCCeEEEEccccccccCCCC
Q 028043 157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL---PSSLKRIVLVSSVGVTKFNELP 212 (214)
Q Consensus 157 ~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~---~~~~~~iV~vSS~~~~~~~~~p 212 (214)
-|.|-. +++++ .+...||+..+-++.|+..+.|
T Consensus 225 eNVGg~-----------------------v~DAv~~~ln~~aRi~~CG~IS~YN~~~~~ 260 (340)
T COG2130 225 ENVGGE-----------------------VLDAVLPLLNLFARIPVCGAISQYNAPELP 260 (340)
T ss_pred EcCCch-----------------------HHHHHHHhhccccceeeeeehhhcCCCCCC
Confidence 999842 22222 1233577777777777655433
|
|
| >cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.0016 Score=55.02 Aligned_cols=76 Identities=18% Similarity=0.122 Sum_probs=54.1
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh--h--CCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--F--EGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~--~--~~~d~li 156 (214)
.+++++|+|+++++|.++++.+...|++|+++++++++.+.+.. .. .. ...|..+.+..+... . +++|+++
T Consensus 166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~~-~~---~~~~~~~~~~~~~~~~~~~~~~~d~~i 240 (342)
T cd08266 166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKE-LG-AD---YVIDYRKEDFVREVRELTGKRGVDVVV 240 (342)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cC-CC---eEEecCChHHHHHHHHHhCCCCCcEEE
Confidence 46799999999999999999999999999999999887665532 21 11 123554443332211 1 3689999
Q ss_pred eccCC
Q 028043 157 CCTGT 161 (214)
Q Consensus 157 ~~Ag~ 161 (214)
+++|.
T Consensus 241 ~~~g~ 245 (342)
T cd08266 241 EHVGA 245 (342)
T ss_pred ECCcH
Confidence 99973
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone |
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00039 Score=59.56 Aligned_cols=77 Identities=22% Similarity=0.155 Sum_probs=52.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhc----cchhhhCCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD----LDPAIFEGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~----v~~~~~~~~d~li 156 (214)
.|.+++|+||+|++|..+++.+...|++|+++++++++.+.+.+.+. +.. ..|..+.++ +.+..-+++|+++
T Consensus 151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lG---a~~-vi~~~~~~~~~~~i~~~~~~gvd~v~ 226 (338)
T cd08295 151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLG---FDD-AFNYKEEPDLDAALKRYFPNGIDIYF 226 (338)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcC---Cce-eEEcCCcccHHHHHHHhCCCCcEEEE
Confidence 57899999999999999999888899999999999888776654232 111 122222112 2221113689999
Q ss_pred eccCC
Q 028043 157 CCTGT 161 (214)
Q Consensus 157 ~~Ag~ 161 (214)
.+.|.
T Consensus 227 d~~g~ 231 (338)
T cd08295 227 DNVGG 231 (338)
T ss_pred ECCCH
Confidence 88763
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00024 Score=61.15 Aligned_cols=75 Identities=20% Similarity=0.237 Sum_probs=51.0
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChh---ccchhhhC-CCcEEEe
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK---DLDPAIFE-GVTHVIC 157 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~---~v~~~~~~-~~d~li~ 157 (214)
+++|||+||+||+|...++.+...|+.++++..+.++.+. .+.+... ...|..+.+ .+++..-+ ++|+++.
T Consensus 143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~-~~~lGAd----~vi~y~~~~~~~~v~~~t~g~gvDvv~D 217 (326)
T COG0604 143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLEL-LKELGAD----HVINYREEDFVEQVRELTGGKGVDVVLD 217 (326)
T ss_pred CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHH-HHhcCCC----EEEcCCcccHHHHHHHHcCCCCceEEEE
Confidence 7899999999999999999999999888888777777663 3333211 122333332 22221122 5999998
Q ss_pred ccCC
Q 028043 158 CTGT 161 (214)
Q Consensus 158 ~Ag~ 161 (214)
..|.
T Consensus 218 ~vG~ 221 (326)
T COG0604 218 TVGG 221 (326)
T ss_pred CCCH
Confidence 8874
|
|
| >cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00053 Score=58.91 Aligned_cols=113 Identities=12% Similarity=0.068 Sum_probs=69.1
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCC-------eEEEEEcChhH--HHHHhcccCCCCEEEE-EecCCChhccchhhhCCC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNI-------KSRLLLRDPEK--ATTLFGKQDEETLQVC-KGDTRNPKDLDPAIFEGV 152 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~-------~V~~~~r~~~~--~~~~~~~~~~~~~~~v-~~Di~d~~~v~~~~~~~~ 152 (214)
++|.|+||+|.||..++..|+..|. ++++++++++. ++...-.+........ ...++. ++.+ .+.+.
T Consensus 3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~-~~~~--~~~da 79 (322)
T cd01338 3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVITD-DPNV--AFKDA 79 (322)
T ss_pred eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEec-CcHH--HhCCC
Confidence 5899999999999999999998876 79999985432 2221111111000000 011111 1112 25689
Q ss_pred cEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-C--CCeEEEEc
Q 028043 153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S--LKRIVLVS 201 (214)
Q Consensus 153 d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~--~~~iV~vS 201 (214)
|+||..||....+. ++-.+.+..|+.-...+.+.+++ . ...+|.+|
T Consensus 80 DivvitaG~~~k~g---~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvs 128 (322)
T cd01338 80 DWALLVGAKPRGPG---MERADLLKANGKIFTAQGKALNDVASRDVKVLVVG 128 (322)
T ss_pred CEEEEeCCCCCCCC---CcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEec
Confidence 99999999864322 23344568888888888888743 3 34556555
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00046 Score=64.17 Aligned_cols=74 Identities=20% Similarity=0.255 Sum_probs=62.5
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
..+|+|.| .|.+|+.+++.|.++|+++++++.|+++.++..+ .+..++.+|.+|++.++++-.++.|.+|-+-+
T Consensus 400 ~~~vII~G-~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~----~g~~v~~GDat~~~~L~~agi~~A~~vv~~~~ 473 (601)
T PRK03659 400 KPQVIIVG-FGRFGQVIGRLLMANKMRITVLERDISAVNLMRK----YGYKVYYGDATQLELLRAAGAEKAEAIVITCN 473 (601)
T ss_pred cCCEEEec-CchHHHHHHHHHHhCCCCEEEEECCHHHHHHHHh----CCCeEEEeeCCCHHHHHhcCCccCCEEEEEeC
Confidence 35788888 7999999999999999999999999998887653 35678999999999998765668888886654
|
|
| >cd08293 PTGR2 Prostaglandin reductase | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00072 Score=57.86 Aligned_cols=76 Identities=17% Similarity=0.140 Sum_probs=51.3
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCCh---hccchhhhCCCcEEEe
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP---KDLDPAIFEGVTHVIC 157 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~---~~v~~~~~~~~d~li~ 157 (214)
+.+|+|+||+|++|..+++.+...|+ +|+++++++++.+.+.+++. +.. ..|..+. +.+.+..-+++|+++.
T Consensus 155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lG---a~~-vi~~~~~~~~~~i~~~~~~gvd~vid 230 (345)
T cd08293 155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELG---FDA-AINYKTDNVAERLRELCPEGVDVYFD 230 (345)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcC---CcE-EEECCCCCHHHHHHHHCCCCceEEEE
Confidence 37999999999999999988888999 79999999888776554332 111 1222221 1222211136899998
Q ss_pred ccCC
Q 028043 158 CTGT 161 (214)
Q Consensus 158 ~Ag~ 161 (214)
+.|.
T Consensus 231 ~~g~ 234 (345)
T cd08293 231 NVGG 234 (345)
T ss_pred CCCc
Confidence 8763
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid |
| >TIGR01759 MalateDH-SF1 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.0012 Score=56.85 Aligned_cols=113 Identities=13% Similarity=0.100 Sum_probs=68.6
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCC-------eEEEEEcCh--hHHHHHhcccCCCCEEEEE-ecCCChhccchhhhCCC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNI-------KSRLLLRDP--EKATTLFGKQDEETLQVCK-GDTRNPKDLDPAIFEGV 152 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~v~-~Di~d~~~v~~~~~~~~ 152 (214)
-+|.|+||+|.+|+.++..|+..|. +++++++++ +.++.....+......... ..++ .++.+ .+.+.
T Consensus 4 ~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~-~~~~~--~~~da 80 (323)
T TIGR01759 4 VRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVAT-TDPEE--AFKDV 80 (323)
T ss_pred eEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEe-cChHH--HhCCC
Confidence 4799999999999999999998874 799999864 2232221111111100000 0111 11112 25689
Q ss_pred cEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-C--CCeEEEEc
Q 028043 153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S--LKRIVLVS 201 (214)
Q Consensus 153 d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~--~~~iV~vS 201 (214)
|+||..||...-+ .++-.+.+..|..-...+.+.+++ . ...++.+|
T Consensus 81 DvVVitAG~~~k~---g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs 129 (323)
T TIGR01759 81 DAALLVGAFPRKP---GMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVG 129 (323)
T ss_pred CEEEEeCCCCCCC---CCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence 9999999985422 223345668888888888888743 2 33455554
|
This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms. |
| >PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.00053 Score=63.99 Aligned_cols=74 Identities=30% Similarity=0.326 Sum_probs=62.3
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
.++|+|.| .|.+|+.+++.|.++|.++++++.++++.+.+.+ .+..++.+|.+|++-++++-.++.|.+|.+-.
T Consensus 400 ~~~vII~G-~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~----~g~~v~~GDat~~~~L~~agi~~A~~vvv~~~ 473 (621)
T PRK03562 400 QPRVIIAG-FGRFGQIVGRLLLSSGVKMTVLDHDPDHIETLRK----FGMKVFYGDATRMDLLESAGAAKAEVLINAID 473 (621)
T ss_pred cCcEEEEe-cChHHHHHHHHHHhCCCCEEEEECCHHHHHHHHh----cCCeEEEEeCCCHHHHHhcCCCcCCEEEEEeC
Confidence 36788888 7899999999999999999999999999887753 35678999999999888754567888886654
|
|
| >cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00079 Score=56.89 Aligned_cols=74 Identities=27% Similarity=0.356 Sum_probs=52.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCC-hhccchhhhCCCcEEEecc
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN-PKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d-~~~v~~~~~~~~d~li~~A 159 (214)
.+.+++|+||+|++|.++++.+...|.+|+++++++++.+.+.+ +. .. .++ |..+ .+.+.+ ..++|++++++
T Consensus 162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~-~~-~~~--~~~~~~~~~~~--~~~~d~v~~~~ 234 (332)
T cd08259 162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKE-LG-AD-YVI--DGSKFSEDVKK--LGGADVVIELV 234 (332)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHH-cC-Cc-EEE--ecHHHHHHHHh--ccCCCEEEECC
Confidence 46799999999999999999999999999999998877666532 11 11 111 2221 122222 23799999998
Q ss_pred CC
Q 028043 160 GT 161 (214)
Q Consensus 160 g~ 161 (214)
|.
T Consensus 235 g~ 236 (332)
T cd08259 235 GS 236 (332)
T ss_pred Ch
Confidence 74
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. |
| >PRK06223 malate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.0011 Score=56.37 Aligned_cols=114 Identities=12% Similarity=0.156 Sum_probs=64.7
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCC-CEEEEEecCCChhccchhhhCCCcEEEecc
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEE-TLQVCKGDTRNPKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~-~~~~v~~Di~d~~~v~~~~~~~~d~li~~A 159 (214)
+++|.|.|| |.+|..++..++..|. +|++.+++++.++.....+... ........++...+.+ .+.+.|++|..+
T Consensus 2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~~--~~~~aDiVii~~ 78 (307)
T PRK06223 2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDYE--DIAGSDVVVITA 78 (307)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCHH--HHCCCCEEEECC
Confidence 478999998 9999999999998875 9999999887654422111100 0000001111111122 246899999999
Q ss_pred CCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CC-CeEEEEc
Q 028043 160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL-KRIVLVS 201 (214)
Q Consensus 160 g~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~-~~iV~vS 201 (214)
|....+. ..-.+...-|..-...+++.+.+ .. ..+|++|
T Consensus 79 ~~p~~~~---~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~t 119 (307)
T PRK06223 79 GVPRKPG---MSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVT 119 (307)
T ss_pred CCCCCcC---CCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 9753211 11122334566666666665532 22 3355544
|
|
| >PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.0018 Score=48.33 Aligned_cols=105 Identities=17% Similarity=0.193 Sum_probs=64.8
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHH-------------------HHHhc----ccCCCCEEEEEec
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKA-------------------TTLFG----KQDEETLQVCKGD 137 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~-------------------~~~~~----~~~~~~~~~v~~D 137 (214)
.++|+|.| .|++|+++++.|+..|. +++++|.+.-.. +.+++ ..+..+++.+..+
T Consensus 2 ~~~v~iiG-~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~ 80 (135)
T PF00899_consen 2 NKRVLIIG-AGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK 80 (135)
T ss_dssp T-EEEEES-TSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred CCEEEEEC-cCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence 46899999 79999999999999999 588888752111 11111 1113345666677
Q ss_pred CCChhccchhhhCCCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEEccccccc
Q 028043 138 TRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTK 207 (214)
Q Consensus 138 i~d~~~v~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~vSS~~~~~ 207 (214)
+. .+...+ .+++.|++|.+... ...-..+.+.++.....+|..+..+.++
T Consensus 81 ~~-~~~~~~-~~~~~d~vi~~~d~------------------~~~~~~l~~~~~~~~~p~i~~~~~g~~G 130 (135)
T PF00899_consen 81 ID-EENIEE-LLKDYDIVIDCVDS------------------LAARLLLNEICREYGIPFIDAGVNGFYG 130 (135)
T ss_dssp CS-HHHHHH-HHHTSSEEEEESSS------------------HHHHHHHHHHHHHTT-EEEEEEEETTEE
T ss_pred cc-cccccc-cccCCCEEEEecCC------------------HHHHHHHHHHHHHcCCCEEEEEeecCEE
Confidence 73 344444 35789999987541 1223345556655556788777665443
|
Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A .... |
| >PRK05442 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.00082 Score=57.83 Aligned_cols=114 Identities=13% Similarity=0.084 Sum_probs=68.6
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCC-------eEEEEEcChh--HHHHHhcccCCCCEEEE-EecCCChhccchhhhCC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNI-------KSRLLLRDPE--KATTLFGKQDEETLQVC-KGDTRNPKDLDPAIFEG 151 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~-------~V~~~~r~~~--~~~~~~~~~~~~~~~~v-~~Di~d~~~v~~~~~~~ 151 (214)
.++|.|+||+|.+|+.++..|+..|. +++++|+++. +++.....+........ ...++. +..+ .+.+
T Consensus 4 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~~-~~y~--~~~d 80 (326)
T PRK05442 4 PVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVITD-DPNV--AFKD 80 (326)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEec-ChHH--HhCC
Confidence 36899999999999999999988664 7999998543 22221111110000000 001111 1112 2568
Q ss_pred CcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-C--CCeEEEEc
Q 028043 152 VTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S--LKRIVLVS 201 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~--~~~iV~vS 201 (214)
.|+||..||...-+ .++-.+.+..|..-...+.+.+++ . ...+|.+|
T Consensus 81 aDiVVitaG~~~k~---g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs 130 (326)
T PRK05442 81 ADVALLVGARPRGP---GMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVG 130 (326)
T ss_pred CCEEEEeCCCCCCC---CCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 99999999975422 223345668888888888888744 2 34556555
|
|
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.00085 Score=59.77 Aligned_cols=73 Identities=29% Similarity=0.353 Sum_probs=53.4
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
+.+++|+|.|+ |.+|+.+++.|...|+ +|++++|++++.+.+.+.+.. .. .+.+++.+ .+.+.|+||.+
T Consensus 180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~---~~-----~~~~~~~~-~l~~aDvVI~a 249 (423)
T PRK00045 180 LSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGG---EA-----IPLDELPE-ALAEADIVISS 249 (423)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCC---cE-----eeHHHHHH-HhccCCEEEEC
Confidence 56789999995 9999999999999997 799999999888776655431 11 12233333 24578888888
Q ss_pred cCCC
Q 028043 159 TGTT 162 (214)
Q Consensus 159 Ag~~ 162 (214)
.|..
T Consensus 250 T~s~ 253 (423)
T PRK00045 250 TGAP 253 (423)
T ss_pred CCCC
Confidence 7654
|
|
| >cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.00065 Score=56.56 Aligned_cols=112 Identities=21% Similarity=0.172 Sum_probs=68.3
Q ss_pred EEEEcCchHHHHHHHHHHHHCC----CeEEEEEcChhHHHHHhcccCCC-CEEEEEecCCChhccchhhhCCCcEEEecc
Q 028043 85 VLVAGGSGGVGQLVVASLLSRN----IKSRLLLRDPEKATTLFGKQDEE-TLQVCKGDTRNPKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 85 vlITGasggIG~~la~~L~~~G----~~V~~~~r~~~~~~~~~~~~~~~-~~~~v~~Di~d~~~v~~~~~~~~d~li~~A 159 (214)
|.|.||+|.+|..++..|+..| .+|+++|+++++++.....+... ... ....++-.++..+ .+.+.|+||..+
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~-~~~~i~~~~d~~~-~~~~aDiVv~t~ 78 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPL-ADIKVSITDDPYE-AFKDADVVIITA 78 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhc-cCcEEEECCchHH-HhCCCCEEEECC
Confidence 5789998999999999999999 68999999887665443322210 000 0112221222333 357899999999
Q ss_pred CCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc--CCCeEEEEc
Q 028043 160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS--SLKRIVLVS 201 (214)
Q Consensus 160 g~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~--~~~~iV~vS 201 (214)
|....+. +.-.....-|+.-...+.+.+++ ....++++|
T Consensus 79 ~~~~~~g---~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~t 119 (263)
T cd00650 79 GVGRKPG---MGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVS 119 (263)
T ss_pred CCCCCcC---CCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 9765321 12223445677777777777643 223455554
|
Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains |
| >PTZ00117 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0011 Score=56.90 Aligned_cols=115 Identities=11% Similarity=0.071 Sum_probs=65.9
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCC-CeEEEEEcChhHHHHHhcccCC-CCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQDE-ETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~-~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
+.++|.|.|| |.+|+.++..++..| .+|++++++++.++...-.+.. ....-....+....+.+ .+.+.|+||..
T Consensus 4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~~~d~~--~l~~ADiVVit 80 (319)
T PTZ00117 4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILGTNNYE--DIKDSDVVVIT 80 (319)
T ss_pred CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEeCCCHH--HhCCCCEEEEC
Confidence 3568999996 999999999999988 6899999987654321110110 00000001111111223 24689999999
Q ss_pred cCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CC-CeEEEEc
Q 028043 159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL-KRIVLVS 201 (214)
Q Consensus 159 Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~-~~iV~vS 201 (214)
+|....+.+ .-.+....|..-...+.+.+.+ .. ..+|++|
T Consensus 81 ag~~~~~g~---~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvs 122 (319)
T PTZ00117 81 AGVQRKEEM---TREDLLTINGKIMKSVAESVKKYCPNAFVICVT 122 (319)
T ss_pred CCCCCCCCC---CHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 997543221 2233456666656666666533 22 2355554
|
|
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00098 Score=49.87 Aligned_cols=69 Identities=13% Similarity=0.069 Sum_probs=53.9
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
+++++++.|.+ -|.++++.|.+.|++|+++|.++...+...+ ..+.++.+|+.+++- .++++.|.++..
T Consensus 16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~----~~~~~v~dDlf~p~~---~~y~~a~liysi 84 (134)
T PRK04148 16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKK----LGLNAFVDDLFNPNL---EIYKNAKLIYSI 84 (134)
T ss_pred cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHH----hCCeEEECcCCCCCH---HHHhcCCEEEEe
Confidence 35789999944 8889999999999999999999998776543 346889999997652 235678887743
|
|
| >PRK14874 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00048 Score=59.45 Aligned_cols=70 Identities=26% Similarity=0.283 Sum_probs=45.3
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCe---EEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIK---SRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~---V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
+++|+|.||+|++|+++++.|.++|+. +..+.++.+..+.+. +.+ ......|+.+. .+.++|+||.+
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~--~~g--~~i~v~d~~~~------~~~~vDvVf~A 70 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELS--FKG--KELKVEDLTTF------DFSGVDIALFS 70 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeee--eCC--ceeEEeeCCHH------HHcCCCEEEEC
Confidence 468999999999999999999998874 466776654333321 111 23344455432 12467777777
Q ss_pred cCC
Q 028043 159 TGT 161 (214)
Q Consensus 159 Ag~ 161 (214)
+|.
T Consensus 71 ~g~ 73 (334)
T PRK14874 71 AGG 73 (334)
T ss_pred CCh
Confidence 664
|
|
| >PLN03154 putative allyl alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00078 Score=58.24 Aligned_cols=76 Identities=22% Similarity=0.159 Sum_probs=51.4
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhc----cchhhhCCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD----LDPAIFEGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~----v~~~~~~~~d~li 156 (214)
.+.+|+|+||+|++|..+++.+...|++|+++++++++.+.+.+.+. +.. ..|..+.++ +.+..-+++|+++
T Consensus 158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lG---a~~-vi~~~~~~~~~~~i~~~~~~gvD~v~ 233 (348)
T PLN03154 158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLG---FDE-AFNYKEEPDLDAALKRYFPEGIDIYF 233 (348)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcC---CCE-EEECCCcccHHHHHHHHCCCCcEEEE
Confidence 47899999999999999998888899999999998888766542232 111 123322212 2221113689999
Q ss_pred eccC
Q 028043 157 CCTG 160 (214)
Q Consensus 157 ~~Ag 160 (214)
.+.|
T Consensus 234 d~vG 237 (348)
T PLN03154 234 DNVG 237 (348)
T ss_pred ECCC
Confidence 8876
|
|
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0013 Score=55.83 Aligned_cols=71 Identities=14% Similarity=0.095 Sum_probs=51.2
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
.+.+++++|.|+ |++|+.+++.|...|++|++++|++++.+.... .+..++ + .+++.+ .+.+.|+||++
T Consensus 149 ~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~----~G~~~~--~---~~~l~~-~l~~aDiVI~t 217 (296)
T PRK08306 149 TIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARITE----MGLSPF--H---LSELAE-EVGKIDIIFNT 217 (296)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----cCCeee--c---HHHHHH-HhCCCCEEEEC
Confidence 346899999995 789999999999999999999999876554332 122222 2 233333 35679999997
Q ss_pred cC
Q 028043 159 TG 160 (214)
Q Consensus 159 Ag 160 (214)
+.
T Consensus 218 ~p 219 (296)
T PRK08306 218 IP 219 (296)
T ss_pred CC
Confidence 63
|
|
| >TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0013 Score=55.98 Aligned_cols=75 Identities=20% Similarity=0.173 Sum_probs=51.3
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccch---hhh-CCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDP---AIF-EGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~---~~~-~~~d~li 156 (214)
.+.+|+|+||+|++|..+++.+...|++|+++++++++.+.+.+ +. +.. ..|..+.+.+.+ ... +++|+++
T Consensus 138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~-lG---a~~-vi~~~~~~~~~~~~~~~~~~gvdvv~ 212 (325)
T TIGR02825 138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKK-LG---FDV-AFNYKTVKSLEETLKKASPDGYDCYF 212 (325)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cC---CCE-EEeccccccHHHHHHHhCCCCeEEEE
Confidence 46899999999999999998888899999999999887766543 22 211 123322222221 112 2589999
Q ss_pred eccC
Q 028043 157 CCTG 160 (214)
Q Consensus 157 ~~Ag 160 (214)
.+.|
T Consensus 213 d~~G 216 (325)
T TIGR02825 213 DNVG 216 (325)
T ss_pred ECCC
Confidence 8876
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. |
| >COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0013 Score=55.99 Aligned_cols=113 Identities=20% Similarity=0.189 Sum_probs=69.2
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCC--eEEEEEcChhHHHHHhcccCCC-CEEEEEecCCChhccchhhhCCCcEEEecc
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDEE-TLQVCKGDTRNPKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~-~~~~v~~Di~d~~~v~~~~~~~~d~li~~A 159 (214)
++|.|+|| |+||+.++..|+.++. ++++++++++.++-....+... -.......+....+.+ .+.+.|+++-.|
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~~~y~--~~~~aDiVvitA 77 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGDGDYE--DLKGADIVVITA 77 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecCCChh--hhcCCCEEEEeC
Confidence 47999999 9999999999987754 7999999855543322222111 0111112222211122 256899999999
Q ss_pred CCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CCCeEEEEc
Q 028043 160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVS 201 (214)
Q Consensus 160 g~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~~~iV~vS 201 (214)
|...-|.+ .-.+.++.|..-...+.+++.. ...-++.+-
T Consensus 78 G~prKpGm---tR~DLl~~Na~I~~~i~~~i~~~~~d~ivlVv 117 (313)
T COG0039 78 GVPRKPGM---TRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVV 117 (313)
T ss_pred CCCCCCCC---CHHHHHHhhHHHHHHHHHHHHhhCCCeEEEEe
Confidence 98764432 2234668888888888887743 333444433
|
|
| >PRK14027 quinate/shikimate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.00071 Score=57.09 Aligned_cols=78 Identities=21% Similarity=0.294 Sum_probs=53.5
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCC-CCE-EEEEecCCChhccchhhhCCCcEEE
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDE-ETL-QVCKGDTRNPKDLDPAIFEGVTHVI 156 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~-~~~-~~v~~Di~d~~~v~~~~~~~~d~li 156 (214)
..+|+++|.| +||.|++++..|++.|. +|+++.|+.++.+++.+.+.. .+. .....| ..++.+ .....|+||
T Consensus 125 ~~~k~vlilG-aGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~---~~~~~~-~~~~~divI 199 (283)
T PRK14027 125 AKLDSVVQVG-AGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVD---ARGIED-VIAAADGVV 199 (283)
T ss_pred cCCCeEEEEC-CcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEEecC---HhHHHH-HHhhcCEEE
Confidence 4578999999 49999999999999997 699999999998887655421 111 111122 222222 234689999
Q ss_pred eccCCC
Q 028043 157 CCTGTT 162 (214)
Q Consensus 157 ~~Ag~~ 162 (214)
|+....
T Consensus 200 NaTp~G 205 (283)
T PRK14027 200 NATPMG 205 (283)
T ss_pred EcCCCC
Confidence 987654
|
|
| >cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0012 Score=55.87 Aligned_cols=75 Identities=20% Similarity=0.176 Sum_probs=51.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChh---ccchhhhCCCcEEEe
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK---DLDPAIFEGVTHVIC 157 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~---~v~~~~~~~~d~li~ 157 (214)
.+.+++|+||+|++|..+++.+...|++|+++++++++.+.+.+ +. +.. ..|..+++ .+++..-+++|+++.
T Consensus 143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~-~G---a~~-vi~~~~~~~~~~v~~~~~~gvd~vld 217 (329)
T cd08294 143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE-LG---FDA-VFNYKTVSLEEALKEAAPDGIDCYFD 217 (329)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cC---CCE-EEeCCCccHHHHHHHHCCCCcEEEEE
Confidence 46899999999999999999988899999999999888776643 22 111 12333222 222211135888888
Q ss_pred ccC
Q 028043 158 CTG 160 (214)
Q Consensus 158 ~Ag 160 (214)
+.|
T Consensus 218 ~~g 220 (329)
T cd08294 218 NVG 220 (329)
T ss_pred CCC
Confidence 765
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac |
| >PRK12749 quinate/shikimate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0016 Score=55.17 Aligned_cols=81 Identities=16% Similarity=0.197 Sum_probs=52.3
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcCh---hHHHHHhcccCCC-CEEEEEecCCChhccchhhhCCCcE
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDP---EKATTLFGKQDEE-TLQVCKGDTRNPKDLDPAIFEGVTH 154 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~---~~~~~~~~~~~~~-~~~~v~~Di~d~~~v~~~~~~~~d~ 154 (214)
..+|+++|.|| ||-+++++..|+..|. +|+++.|++ ++.+++.+.+... .......++.+.+.+.+ ...+.|+
T Consensus 122 ~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~-~~~~aDi 199 (288)
T PRK12749 122 IKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAE-ALASADI 199 (288)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhhh-hcccCCE
Confidence 46789999995 7779999999999997 799999984 4666665544211 11111122222222332 2457899
Q ss_pred EEeccCCC
Q 028043 155 VICCTGTT 162 (214)
Q Consensus 155 li~~Ag~~ 162 (214)
|||+-...
T Consensus 200 vINaTp~G 207 (288)
T PRK12749 200 LTNGTKVG 207 (288)
T ss_pred EEECCCCC
Confidence 99977554
|
|
| >PLN02602 lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0014 Score=56.92 Aligned_cols=108 Identities=18% Similarity=0.265 Sum_probs=68.0
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCC--eEEEEEcChhHHHHHhcccCCC-----CEEEEEecCCChhccchhhhCCCcEE
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDEE-----TLQVCKGDTRNPKDLDPAIFEGVTHV 155 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~-----~~~~v~~Di~d~~~v~~~~~~~~d~l 155 (214)
++|.|+|+ |.||+.++..|+..|. ++++++.+++.++.....+... ... +.++ .| .+ .+.+.|+|
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~-i~~~-~d---y~--~~~daDiV 109 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTK-ILAS-TD---YA--VTAGSDLC 109 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCE-EEeC-CC---HH--HhCCCCEE
Confidence 69999996 9999999999998875 6999999876654432222110 111 1111 12 22 25689999
Q ss_pred EeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-C-CCeEEEEc
Q 028043 156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-LKRIVLVS 201 (214)
Q Consensus 156 i~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~-~~~iV~vS 201 (214)
|-.||....+. ++-.+.+..|..-...+.+.+++ . ...+|.+|
T Consensus 110 VitAG~~~k~g---~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvt 154 (350)
T PLN02602 110 IVTAGARQIPG---ESRLNLLQRNVALFRKIIPELAKYSPDTILLIVS 154 (350)
T ss_pred EECCCCCCCcC---CCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 99999864322 22234556777777777777643 2 23555555
|
|
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0011 Score=56.58 Aligned_cols=73 Identities=25% Similarity=0.324 Sum_probs=54.1
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCC-CeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
+.+++|+|.|+ |.||+.+++.|...| .+|++++|++++.+++.+++.. ..+ +.+++.+ ...+.|+||.+
T Consensus 176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~---~~~-----~~~~~~~-~l~~aDvVi~a 245 (311)
T cd05213 176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGG---NAV-----PLDELLE-LLNEADVVISA 245 (311)
T ss_pred ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCC---eEE-----eHHHHHH-HHhcCCEEEEC
Confidence 46899999996 999999999999876 5799999999888777665432 222 2233443 24678999999
Q ss_pred cCCC
Q 028043 159 TGTT 162 (214)
Q Consensus 159 Ag~~ 162 (214)
.+..
T Consensus 246 t~~~ 249 (311)
T cd05213 246 TGAP 249 (311)
T ss_pred CCCC
Confidence 8854
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >PLN00203 glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0014 Score=59.78 Aligned_cols=76 Identities=22% Similarity=0.278 Sum_probs=55.7
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
+.+++|+|.|+ |.+|+.+++.|...|+ +|+++.|+.++.+.+.+.+.+..+. ..++ +++.. .+.+.|+||.+
T Consensus 264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~--~~~~---~dl~~-al~~aDVVIsA 336 (519)
T PLN00203 264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEII--YKPL---DEMLA-CAAEADVVFTS 336 (519)
T ss_pred CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceE--eecH---hhHHH-HHhcCCEEEEc
Confidence 56899999997 9999999999999997 6999999999988877654322221 1222 23333 35678999988
Q ss_pred cCCC
Q 028043 159 TGTT 162 (214)
Q Consensus 159 Ag~~ 162 (214)
.+..
T Consensus 337 T~s~ 340 (519)
T PLN00203 337 TSSE 340 (519)
T ss_pred cCCC
Confidence 7644
|
|
| >cd05293 LDH_1 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0013 Score=56.24 Aligned_cols=108 Identities=16% Similarity=0.142 Sum_probs=67.6
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCC--eEEEEEcChhHHHHHhcccCC-----CCEEEEEecCCChhccchhhhCCCcEE
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDE-----ETLQVCKGDTRNPKDLDPAIFEGVTHV 155 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~-----~~~~~v~~Di~d~~~v~~~~~~~~d~l 155 (214)
++|.|+|+ |.||..++..|+..|. ++++++++++.++.....+.. ....+... .|. +. +.+.|+|
T Consensus 4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~dy---~~--~~~adiv 75 (312)
T cd05293 4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KDY---SV--TANSKVV 75 (312)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CCH---HH--hCCCCEE
Confidence 58999996 9999999999988775 699999987655433222211 01122211 122 22 4679999
Q ss_pred EeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-C-CCeEEEEc
Q 028043 156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-LKRIVLVS 201 (214)
Q Consensus 156 i~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~-~~~iV~vS 201 (214)
|..||....+. ++-.+.+..|..-...+.+.+++ . ...++.+|
T Consensus 76 vitaG~~~k~g---~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvs 120 (312)
T cd05293 76 IVTAGARQNEG---ESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVS 120 (312)
T ss_pred EECCCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEcc
Confidence 99999864322 22234567787777777777743 2 34455555
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0012 Score=58.69 Aligned_cols=74 Identities=27% Similarity=0.342 Sum_probs=53.1
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCC-CeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
.+.+++++|.|+ |.+|..+++.|...| .+|++++|+.++.+++.+.+.. ..+ + .+++.+ .+.+.|+||.
T Consensus 177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~---~~i--~---~~~l~~-~l~~aDvVi~ 246 (417)
T TIGR01035 177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGG---EAV--K---FEDLEE-YLAEADIVIS 246 (417)
T ss_pred CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCC---eEe--e---HHHHHH-HHhhCCEEEE
Confidence 356789999996 999999999999999 6899999999887766554421 112 1 123333 2456888888
Q ss_pred ccCCC
Q 028043 158 CTGTT 162 (214)
Q Consensus 158 ~Ag~~ 162 (214)
+.+..
T Consensus 247 aT~s~ 251 (417)
T TIGR01035 247 STGAP 251 (417)
T ss_pred CCCCC
Confidence 86643
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0041 Score=50.74 Aligned_cols=78 Identities=22% Similarity=0.330 Sum_probs=50.0
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChh-------------------HHHHHhcccC----CCCEEEEE
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPE-------------------KATTLFGKQD----EETLQVCK 135 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~-------------------~~~~~~~~~~----~~~~~~v~ 135 (214)
+.+++|+|.| .||+|+++++.|+..|. +++++|.+.- +.+.+++.+. ..+++.+.
T Consensus 19 L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~ 97 (228)
T cd00757 19 LKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYN 97 (228)
T ss_pred HhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEec
Confidence 4567899999 89999999999999998 5777765421 1111111111 22455555
Q ss_pred ecCCChhccchhhhCCCcEEEeccC
Q 028043 136 GDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 136 ~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
.+++ .+.+.+ ++.++|+||.+..
T Consensus 98 ~~i~-~~~~~~-~~~~~DvVi~~~d 120 (228)
T cd00757 98 ERLD-AENAEE-LIAGYDLVLDCTD 120 (228)
T ss_pred ceeC-HHHHHH-HHhCCCEEEEcCC
Confidence 5553 344443 4678999998764
|
Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). |
| >cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0015 Score=54.58 Aligned_cols=76 Identities=22% Similarity=0.177 Sum_probs=53.6
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchh--hh--CCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPA--IF--EGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~--~~--~~~d~li 156 (214)
.+++++|+|++|++|.++++.+.+.|.+|+++++++++.+.+.+ + + +. ...|..+.+..++. .. +++|.++
T Consensus 144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~-g--~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi 218 (325)
T cd08253 144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVRQ-A-G--AD-AVFNYRAEDLADRILAATAGQGVDVII 218 (325)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c-C--CC-EEEeCCCcCHHHHHHHHcCCCceEEEE
Confidence 57899999999999999999999999999999998887766532 2 1 11 12344443322221 11 3699999
Q ss_pred eccCC
Q 028043 157 CCTGT 161 (214)
Q Consensus 157 ~~Ag~ 161 (214)
+++|.
T Consensus 219 ~~~~~ 223 (325)
T cd08253 219 EVLAN 223 (325)
T ss_pred ECCch
Confidence 98764
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts |
| >TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.002 Score=55.07 Aligned_cols=111 Identities=19% Similarity=0.182 Sum_probs=66.5
Q ss_pred EEEEEcCchHHHHHHHHHHHHCCC--eEEEEEcChhHHHHHhcccCCC-CEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 84 LVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDEE-TLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~-~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
+|.|+||+|.||+.++..|+..|. +++++|+++...+. .+..... ...+.... +.+++.+ .+.+.|++|..||
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~g~a-~DL~~~~~~~~i~~~~--~~~~~~~-~~~daDivvitaG 76 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAAGVA-ADLSHIPTAASVKGFS--GEEGLEN-ALKGADVVVIPAG 76 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCcEEE-chhhcCCcCceEEEec--CCCchHH-HcCCCCEEEEeCC
Confidence 489999999999999999998875 79999987721111 1100011 11111101 1111222 3678999999999
Q ss_pred CCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CC-CeEEEEc
Q 028043 161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL-KRIVLVS 201 (214)
Q Consensus 161 ~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~-~~iV~vS 201 (214)
....+. ++-.+....|+.-...+.+.+.+ .. ..+|.+|
T Consensus 77 ~~~~~g---~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivvs 116 (312)
T TIGR01772 77 VPRKPG---MTRDDLFNVNAGIVKDLVAAVAESCPKAMILVIT 116 (312)
T ss_pred CCCCCC---ccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEec
Confidence 864332 22334567788888888877743 33 3455554
|
Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases. |
| >PLN00112 malate dehydrogenase (NADP); Provisional | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0015 Score=58.26 Aligned_cols=113 Identities=13% Similarity=0.089 Sum_probs=72.4
Q ss_pred CEEEEEcCchHHHHHHHHHHHHC-------CC--eEEEEEcChhHHHHHhcccCCCCEEE-EEecCCChhccchhhhCCC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSR-------NI--KSRLLLRDPEKATTLFGKQDEETLQV-CKGDTRNPKDLDPAIFEGV 152 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~-------G~--~V~~~~r~~~~~~~~~~~~~~~~~~~-v~~Di~d~~~v~~~~~~~~ 152 (214)
-+|.|+|++|.||.+++..|+.. |. ++++++++++.++...-++....... ....++. ++.+ .+.+.
T Consensus 101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~-~~ye--~~kda 177 (444)
T PLN00112 101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGI-DPYE--VFQDA 177 (444)
T ss_pred eEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEec-CCHH--HhCcC
Confidence 48999999999999999999988 65 79999999887655433222111000 0011111 1122 25689
Q ss_pred cEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc--CC-CeEEEEc
Q 028043 153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS--SL-KRIVLVS 201 (214)
Q Consensus 153 d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~--~~-~~iV~vS 201 (214)
|++|..||....+. ++-.+.++.|+.-...+.+.+.+ +. ..||.+|
T Consensus 178 DiVVitAG~prkpG---~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVs 226 (444)
T PLN00112 178 EWALLIGAKPRGPG---MERADLLDINGQIFAEQGKALNEVASRNVKVIVVG 226 (444)
T ss_pred CEEEECCCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcC
Confidence 99999999854322 23344668888888888888744 33 4555555
|
|
| >cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0078 Score=49.41 Aligned_cols=75 Identities=15% Similarity=0.244 Sum_probs=47.6
Q ss_pred EEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHH-------------------Hhcc----cCCCCEEEEEecCC
Q 028043 84 LVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATT-------------------LFGK----QDEETLQVCKGDTR 139 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~-------------------~~~~----~~~~~~~~v~~Di~ 139 (214)
+|+|.| .||+|.++++.|+..|. ++.++|.+.-.... +.+. .+..+++.+..++.
T Consensus 1 kVlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~ 79 (234)
T cd01484 1 KVLLVG-AGGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVG 79 (234)
T ss_pred CEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence 478888 79999999999999998 58888875211111 1111 11234555666775
Q ss_pred ChhccchhhhCCCcEEEecc
Q 028043 140 NPKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 140 d~~~v~~~~~~~~d~li~~A 159 (214)
+.+......+.+.|+||.+.
T Consensus 80 ~~~~~~~~f~~~~DvVi~a~ 99 (234)
T cd01484 80 PEQDFNDTFFEQFHIIVNAL 99 (234)
T ss_pred hhhhchHHHHhCCCEEEECC
Confidence 54433333467888888764
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou |
| >PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.002 Score=54.40 Aligned_cols=43 Identities=19% Similarity=0.216 Sum_probs=37.2
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHH
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATT 121 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~ 121 (214)
++.||+|+|.|++|-+|+.++..|+++|++|+++.|+...+.+
T Consensus 156 ~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~~L~~ 198 (283)
T PRK14192 156 ELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQNLPE 198 (283)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCchhHHH
Confidence 4679999999999999999999999999999999886555444
|
|
| >PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0013 Score=59.26 Aligned_cols=77 Identities=16% Similarity=0.249 Sum_probs=54.5
Q ss_pred CCCCCEEEEEcC----------------chHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChh
Q 028043 79 ASSSKLVLVAGG----------------SGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK 142 (214)
Q Consensus 79 ~~~~k~vlITGa----------------sggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~ 142 (214)
++.||+||||+| ||-.|.+||+++..+|++|+++.-... ++ ...+++++. +...+
T Consensus 253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~-~~------~p~~v~~i~--V~ta~ 323 (475)
T PRK13982 253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD-LA------DPQGVKVIH--VESAR 323 (475)
T ss_pred ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC-CC------CCCCceEEE--ecCHH
Confidence 478999999975 589999999999999999999874321 11 133455544 34444
Q ss_pred ccchhhhC--CCcEEEeccCCCCC
Q 028043 143 DLDPAIFE--GVTHVICCTGTTAF 164 (214)
Q Consensus 143 ~v~~~~~~--~~d~li~~Ag~~~~ 164 (214)
++.+++.. +.|++|++|++..+
T Consensus 324 eM~~av~~~~~~Di~I~aAAVaDy 347 (475)
T PRK13982 324 QMLAAVEAALPADIAIFAAAVADW 347 (475)
T ss_pred HHHHHHHhhCCCCEEEEeccccce
Confidence 44443322 47999999999875
|
|
| >TIGR01915 npdG NADPH-dependent F420 reductase | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0011 Score=53.62 Aligned_cols=41 Identities=29% Similarity=0.266 Sum_probs=36.8
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHh
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF 123 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~ 123 (214)
|+|.|.||+|.+|..+++.|++.|++|++.+|++++.+.+.
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~ 41 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAA 41 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHH
Confidence 46999999999999999999999999999999988776654
|
This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase. |
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0013 Score=51.50 Aligned_cols=42 Identities=21% Similarity=0.242 Sum_probs=36.2
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHH
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKAT 120 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~ 120 (214)
..+.+|+|.|.| .|.||+++++.|...|.+|++.+|.....+
T Consensus 32 ~~l~g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~ 73 (178)
T PF02826_consen 32 RELRGKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSPKPEE 73 (178)
T ss_dssp S-STTSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSCHHHH
T ss_pred cccCCCEEEEEE-EcCCcCeEeeeeecCCceeEEecccCChhh
Confidence 567899999999 799999999999999999999999887554
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0028 Score=54.63 Aligned_cols=73 Identities=19% Similarity=0.202 Sum_probs=53.7
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
.|++|+|+|++ |+|...++.....|++|++++|++++.+...+.- ... ..|-+|++.+++ +.+..|++|..++
T Consensus 166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~lG----Ad~-~i~~~~~~~~~~-~~~~~d~ii~tv~ 238 (339)
T COG1064 166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLG----ADH-VINSSDSDALEA-VKEIADAIIDTVG 238 (339)
T ss_pred CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHhC----CcE-EEEcCCchhhHH-hHhhCcEEEECCC
Confidence 57899999977 9999988888889999999999999887654321 111 223335555554 2334899999888
|
|
| >KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0021 Score=55.76 Aligned_cols=78 Identities=27% Similarity=0.273 Sum_probs=54.2
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh---hCCCcEEE
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI---FEGVTHVI 156 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~---~~~~d~li 156 (214)
..++.|||.||+||+|.+.++.....|..+++++++.+..+-.+ .+.. -...|..+++-++... .+++|+|+
T Consensus 156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k-~lGA----d~vvdy~~~~~~e~~kk~~~~~~DvVl 230 (347)
T KOG1198|consen 156 SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVK-KLGA----DEVVDYKDENVVELIKKYTGKGVDVVL 230 (347)
T ss_pred CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHH-HcCC----cEeecCCCHHHHHHHHhhcCCCccEEE
Confidence 46789999999999999999998889955555666665554433 2221 1346777755554321 23699999
Q ss_pred eccCCC
Q 028043 157 CCTGTT 162 (214)
Q Consensus 157 ~~Ag~~ 162 (214)
.|.|-.
T Consensus 231 D~vg~~ 236 (347)
T KOG1198|consen 231 DCVGGS 236 (347)
T ss_pred ECCCCC
Confidence 999973
|
|
| >cd05292 LDH_2 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0044 Score=52.92 Aligned_cols=107 Identities=16% Similarity=0.160 Sum_probs=66.3
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCC--CeEEEEEcChhHHHHHhcccCC-----CCEEEEEecCCChhccchhhhCCCcEE
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQDE-----ETLQVCKGDTRNPKDLDPAIFEGVTHV 155 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~-----~~~~~v~~Di~d~~~v~~~~~~~~d~l 155 (214)
|+|.|.|+ |.+|..++..|+.+| .+|+++++++++.+.....+.. ...... . .|. + .+.+.|++
T Consensus 1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~-~--~d~---~--~l~~aDiV 71 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIY-A--GDY---A--DCKGADVV 71 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEe-e--CCH---H--HhCCCCEE
Confidence 46999997 999999999999999 5899999998766531111110 111111 1 222 2 25689999
Q ss_pred EeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-C-CCeEEEEc
Q 028043 156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-LKRIVLVS 201 (214)
Q Consensus 156 i~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~-~~~iV~vS 201 (214)
|.++|....+. ++..+....|..-...+++.+++ . .+.++.++
T Consensus 72 iita~~~~~~~---~~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv~t 116 (308)
T cd05292 72 VITAGANQKPG---ETRLDLLKRNVAIFKEIIPQILKYAPDAILLVVT 116 (308)
T ss_pred EEccCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 99999754221 12233456677777777776633 2 23455443
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd00300 LDH_like L-lactate dehydrogenase-like enzymes | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0021 Score=54.61 Aligned_cols=109 Identities=17% Similarity=0.146 Sum_probs=67.4
Q ss_pred EEEEcCchHHHHHHHHHHHHCC--CeEEEEEcChhHHHHHhcccCCCCE--EEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 85 VLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQDEETL--QVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 85 vlITGasggIG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~--~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
|.|.|+ |++|..++..|+..| .+++++++++++++.....+..... .......++ +.+ .+.+.|++|..||
T Consensus 1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~~--~~~--~l~~aDiVIitag 75 (300)
T cd00300 1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRGG--DYA--DAADADIVVITAG 75 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEECC--CHH--HhCCCCEEEEcCC
Confidence 467885 789999999999988 6899999988776554433321100 001111111 122 2568999999999
Q ss_pred CCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-C-CCeEEEEc
Q 028043 161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-LKRIVLVS 201 (214)
Q Consensus 161 ~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~-~~~iV~vS 201 (214)
....+. ++-.+....|+.-...+.+.+++ . ...++.+|
T Consensus 76 ~p~~~~---~~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv~s 115 (300)
T cd00300 76 APRKPG---ETRLDLINRNAPILRSVITNLKKYGPDAIILVVS 115 (300)
T ss_pred CCCCCC---CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 754222 22344556788878888887743 2 34555555
|
Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot |
| >PRK05690 molybdopterin biosynthesis protein MoeB; Provisional | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0088 Score=49.41 Aligned_cols=36 Identities=28% Similarity=0.299 Sum_probs=30.9
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRD 115 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~ 115 (214)
.++.++|+|.|+ ||+|+.+++.|+..|. +++++|.+
T Consensus 29 ~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D 65 (245)
T PRK05690 29 KLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFD 65 (245)
T ss_pred HhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 456789999996 9999999999999997 58888765
|
|
| >PRK08762 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0045 Score=54.32 Aligned_cols=78 Identities=14% Similarity=0.255 Sum_probs=50.7
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcC-------------------hhHHHHHhcccC----CCCEEEEE
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRD-------------------PEKATTLFGKQD----EETLQVCK 135 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~-------------------~~~~~~~~~~~~----~~~~~~v~ 135 (214)
+++++|+|.| .||+|+++++.|+..|. ++++++++ ..+.+.+.+.+. ...++.+.
T Consensus 133 l~~~~VlvvG-~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~ 211 (376)
T PRK08762 133 LLEARVLLIG-AGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQ 211 (376)
T ss_pred HhcCcEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence 4677899997 58999999999999998 68888887 223333222221 22333444
Q ss_pred ecCCChhccchhhhCCCcEEEeccC
Q 028043 136 GDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 136 ~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
..+.+ +.+.+ ++.+.|+||++..
T Consensus 212 ~~~~~-~~~~~-~~~~~D~Vv~~~d 234 (376)
T PRK08762 212 ERVTS-DNVEA-LLQDVDVVVDGAD 234 (376)
T ss_pred ccCCh-HHHHH-HHhCCCEEEECCC
Confidence 44432 33443 4578999998774
|
|
| >cd05295 MDH_like Malate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.002 Score=57.64 Aligned_cols=109 Identities=12% Similarity=0.075 Sum_probs=67.6
Q ss_pred CEEEEEcCchHHHHHHHHHHHHC---CC----eEEEEEc--ChhHHHHHhcccCC------CCEEEEEecCCChhccchh
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSR---NI----KSRLLLR--DPEKATTLFGKQDE------ETLQVCKGDTRNPKDLDPA 147 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~---G~----~V~~~~r--~~~~~~~~~~~~~~------~~~~~v~~Di~d~~~v~~~ 147 (214)
-+|+||||+|.||+++.-.+++- |. .+++++. +.+.++...-++.. .++.+. . +. ..
T Consensus 124 ~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~-~-----~~-~e- 195 (452)
T cd05295 124 LQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVT-T-----DL-DV- 195 (452)
T ss_pred eEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEE-E-----CC-HH-
Confidence 57999999999999999999872 53 3666777 45554432222211 112221 1 11 22
Q ss_pred hhCCCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CC--CeEEEEcc
Q 028043 148 IFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL--KRIVLVSS 202 (214)
Q Consensus 148 ~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~--~~iV~vSS 202 (214)
.+.+.|++|..||....+. ++-.+..+.|..-...+.+++.+ .. .+|+.+.|
T Consensus 196 a~~daDvvIitag~prk~G---~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~t 250 (452)
T cd05295 196 AFKDAHVIVLLDDFLIKEG---EDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGR 250 (452)
T ss_pred HhCCCCEEEECCCCCCCcC---CCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeC
Confidence 3678999999999754322 23344567888888888887733 32 45666654
|
These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PTZ00082 L-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0034 Score=53.91 Aligned_cols=112 Identities=15% Similarity=0.199 Sum_probs=66.3
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHH--H--hcc--cCCCCEEEEEecCCChhccchhhhCCCc
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATT--L--FGK--QDEETLQVCKGDTRNPKDLDPAIFEGVT 153 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~--~--~~~--~~~~~~~~v~~Di~d~~~v~~~~~~~~d 153 (214)
+.++|.|.| +|.+|..++..++..|. +|++++++++.++. + ... ..+....+.. .+|. + .+.+.|
T Consensus 5 ~~~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~--~~d~---~--~l~~aD 76 (321)
T PTZ00082 5 KRRKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG--TNNY---E--DIAGSD 76 (321)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE--CCCH---H--HhCCCC
Confidence 457899999 59999999999999995 89999998875421 1 111 0011122221 1222 2 246899
Q ss_pred EEEeccCCCCCCCCCCC---CCCchhHHHHHHHHHHHHHhcc-CC-CeEEEEc
Q 028043 154 HVICCTGTTAFPSRRWD---GDNTPEKVDWEGVRNLVSALPS-SL-KRIVLVS 201 (214)
Q Consensus 154 ~li~~Ag~~~~~~~~~~---~~~~~~~vNv~g~~~l~~a~~~-~~-~~iV~vS 201 (214)
+||..||....+.. ++ +-.+....|+.-...+++.+.+ .. ..++++|
T Consensus 77 iVI~tag~~~~~~~-~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~s 128 (321)
T PTZ00082 77 VVIVTAGLTKRPGK-SDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVIT 128 (321)
T ss_pred EEEECCCCCCCCCC-CcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 99999998653222 11 1133445566666666666533 22 2455555
|
|
| >PRK08644 thiamine biosynthesis protein ThiF; Provisional | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0045 Score=50.01 Aligned_cols=36 Identities=25% Similarity=0.365 Sum_probs=31.5
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCe-EEEEEcC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRD 115 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~-V~~~~r~ 115 (214)
.+..++|+|.| .||+|+.+++.|+..|.. ++++|.+
T Consensus 25 ~L~~~~V~ViG-~GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 25 KLKKAKVGIAG-AGGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred HHhCCCEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 35678899999 699999999999999985 8888887
|
|
| >TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0021 Score=56.53 Aligned_cols=113 Identities=13% Similarity=0.113 Sum_probs=68.6
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCC-e----EEE----EEcChhHHHHHhcccCCCCEEEE-EecCCChhccchhhhCCC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNI-K----SRL----LLRDPEKATTLFGKQDEETLQVC-KGDTRNPKDLDPAIFEGV 152 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~-~----V~~----~~r~~~~~~~~~~~~~~~~~~~v-~~Di~d~~~v~~~~~~~~ 152 (214)
-+|.|+||+|.+|.+++..|+..|. . |.+ ++++.+.++...-++...-.... ..-++. ++.+ .+.+.
T Consensus 45 ~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~-~~y~--~~kda 121 (387)
T TIGR01757 45 VNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGI-DPYE--VFEDA 121 (387)
T ss_pred eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEec-CCHH--HhCCC
Confidence 4899999999999999999998764 2 344 37777766543322221100000 011111 1122 25789
Q ss_pred cEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-C--CCeEEEEc
Q 028043 153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S--LKRIVLVS 201 (214)
Q Consensus 153 d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~--~~~iV~vS 201 (214)
|++|..||....+. ++-.+.+..|+.-...+.+.+.+ . ..++|.+|
T Consensus 122 DIVVitAG~prkpg---~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVs 170 (387)
T TIGR01757 122 DWALLIGAKPRGPG---MERADLLDINGQIFADQGKALNAVASKNCKVLVVG 170 (387)
T ss_pred CEEEECCCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcC
Confidence 99999999854322 23344567888888888888744 2 34555555
|
This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized. |
| >cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0031 Score=52.50 Aligned_cols=76 Identities=18% Similarity=0.187 Sum_probs=52.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhc---cchhh-hCCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD---LDPAI-FEGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~---v~~~~-~~~~d~li 156 (214)
.+++++|+|++|++|..+++.+...|++|+++++++++.+.+.+ .. +. ...|..+.+. +.+.. -+++|.++
T Consensus 139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g---~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi 213 (323)
T cd05276 139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEACRA-LG---AD-VAINYRTEDFAEEVKEATGGRGVDVIL 213 (323)
T ss_pred CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH-cC---CC-EEEeCCchhHHHHHHHHhCCCCeEEEE
Confidence 46899999999999999999999999999999998877766532 21 11 1233333222 22111 13689999
Q ss_pred eccCC
Q 028043 157 CCTGT 161 (214)
Q Consensus 157 ~~Ag~ 161 (214)
+++|.
T Consensus 214 ~~~g~ 218 (323)
T cd05276 214 DMVGG 218 (323)
T ss_pred ECCch
Confidence 98874
|
PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding |
| >PRK08655 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0022 Score=57.42 Aligned_cols=41 Identities=24% Similarity=0.450 Sum_probs=36.2
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHh
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF 123 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~ 123 (214)
|+|.|.||+|.+|..+++.|.+.|++|++.+|+++...+..
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a 41 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVA 41 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHH
Confidence 47999999999999999999999999999999987755443
|
|
| >cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.017 Score=43.34 Aligned_cols=31 Identities=32% Similarity=0.459 Sum_probs=27.1
Q ss_pred EEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcC
Q 028043 84 LVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRD 115 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~G~-~V~~~~r~ 115 (214)
+|+|.|+ |++|.++++.|+..|. ++.++|.+
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d 32 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFD 32 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 4789995 9999999999999998 58888765
|
This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. |
| >KOG4288 consensus Predicted oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0012 Score=53.71 Aligned_cols=112 Identities=17% Similarity=0.148 Sum_probs=82.0
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccCCC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT 162 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag~~ 162 (214)
...++.|+.++.|+++++.....|+.|.++.|+..+ ...+.. ...+.++.+|.....-.+. ...++..++-++|-.
T Consensus 53 e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k--~~l~sw-~~~vswh~gnsfssn~~k~-~l~g~t~v~e~~ggf 128 (283)
T KOG4288|consen 53 EWTLVLGGNPFSGSEVLKNATNVVHSVGILSENENK--QTLSSW-PTYVSWHRGNSFSSNPNKL-KLSGPTFVYEMMGGF 128 (283)
T ss_pred HHHhhhcCCCcchHHHHHHHHhhceeeeEeecccCc--chhhCC-CcccchhhccccccCcchh-hhcCCcccHHHhcCc
Confidence 468999999999999999999999999999998652 111111 3456778888776554443 345677888888755
Q ss_pred CCCCCCCCCCCchhHHHHHHHHHHHHHh-ccCCCeEEEEccccc
Q 028043 163 AFPSRRWDGDNTPEKVDWEGVRNLVSAL-PSSLKRIVLVSSVGV 205 (214)
Q Consensus 163 ~~~~~~~~~~~~~~~vNv~g~~~l~~a~-~~~~~~iV~vSS~~~ 205 (214)
. +...+..+|-....+..+++ +.++++++|||....
T Consensus 129 g-------n~~~m~~ing~ani~a~kaa~~~gv~~fvyISa~d~ 165 (283)
T KOG4288|consen 129 G-------NIILMDRINGTANINAVKAAAKAGVPRFVYISAHDF 165 (283)
T ss_pred c-------chHHHHHhccHhhHHHHHHHHHcCCceEEEEEhhhc
Confidence 3 33445677777777777766 679999999998654
|
|
| >PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0031 Score=54.63 Aligned_cols=74 Identities=16% Similarity=0.095 Sum_probs=44.9
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHC-CCeEEEEEcChhHHHHHhcccCCCCEEEE-EecCCChhccchhhhCCCcEEEecc
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQDEETLQVC-KGDTRNPKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~v-~~Di~d~~~v~~~~~~~~d~li~~A 159 (214)
+++|.|.||+|.+|+++++.|.+. +++++.+.++.+..+.+.+... .+... ..++.+.+.. ...++|+++.+.
T Consensus 2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~~~~--~~~~~~~~~~~~~~~~---~~~~vD~Vf~al 76 (343)
T PRK00436 2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSDVHP--HLRGLVDLVLEPLDPE---ILAGADVVFLAL 76 (343)
T ss_pred CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccCcchHHhCc--ccccccCceeecCCHH---HhcCCCEEEECC
Confidence 478999999999999999999986 6787776664333222221111 11111 1223333221 235799999877
Q ss_pred C
Q 028043 160 G 160 (214)
Q Consensus 160 g 160 (214)
.
T Consensus 77 P 77 (343)
T PRK00436 77 P 77 (343)
T ss_pred C
Confidence 5
|
|
| >PRK15116 sulfur acceptor protein CsdL; Provisional | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.013 Score=49.11 Aligned_cols=35 Identities=29% Similarity=0.388 Sum_probs=30.4
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRD 115 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~ 115 (214)
+.+.+|+|.| .||+|+++++.|+..|. ++++++.+
T Consensus 28 L~~s~VlVvG-~GGVGs~vae~Lar~GVg~itLiD~D 63 (268)
T PRK15116 28 FADAHICVVG-IGGVGSWAAEALARTGIGAITLIDMD 63 (268)
T ss_pred hcCCCEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 4667899998 78999999999999994 78888865
|
|
| >cd05288 PGDH Prostaglandin dehydrogenases | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0039 Score=52.76 Aligned_cols=76 Identities=18% Similarity=0.180 Sum_probs=51.6
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChh---ccchhhhCCCcEEEe
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK---DLDPAIFEGVTHVIC 157 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~---~v~~~~~~~~d~li~ 157 (214)
.+.+++|.|++|.+|..+++.+.+.|++|+.+++++++.+.+.+.+. .. .+ .|..+.+ .+.+..-+++|++++
T Consensus 145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g-~~-~~--~~~~~~~~~~~v~~~~~~~~d~vi~ 220 (329)
T cd05288 145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELG-FD-AA--INYKTPDLAEALKEAAPDGIDVYFD 220 (329)
T ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcC-Cc-eE--EecCChhHHHHHHHhccCCceEEEE
Confidence 46899999999999999999999999999999998887766543222 11 11 2222222 122211136899998
Q ss_pred ccC
Q 028043 158 CTG 160 (214)
Q Consensus 158 ~Ag 160 (214)
+.|
T Consensus 221 ~~g 223 (329)
T cd05288 221 NVG 223 (329)
T ss_pred cch
Confidence 866
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino |
| >PRK05597 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0097 Score=51.85 Aligned_cols=78 Identities=14% Similarity=0.118 Sum_probs=50.7
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChh-------------------HHHHHhccc----CCCCEEEEE
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPE-------------------KATTLFGKQ----DEETLQVCK 135 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~-------------------~~~~~~~~~----~~~~~~~v~ 135 (214)
+++++|+|.| .||+|+++++.|+..|. +++++|.+.- +.+.+++.+ +..+++.+.
T Consensus 26 L~~~~VlivG-~GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~ 104 (355)
T PRK05597 26 LFDAKVAVIG-AGGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSV 104 (355)
T ss_pred HhCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEE
Confidence 4567999999 59999999999999998 5888887631 112222211 123445555
Q ss_pred ecCCChhccchhhhCCCcEEEeccC
Q 028043 136 GDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 136 ~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
.+++. +...+ ++.+.|+||.+..
T Consensus 105 ~~i~~-~~~~~-~~~~~DvVvd~~d 127 (355)
T PRK05597 105 RRLTW-SNALD-ELRDADVILDGSD 127 (355)
T ss_pred eecCH-HHHHH-HHhCCCEEEECCC
Confidence 56653 33333 3678999997763
|
|
| >TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0056 Score=52.24 Aligned_cols=114 Identities=17% Similarity=0.119 Sum_probs=65.7
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHH-hcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTL-FGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~-~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
++|.|.|+ |.+|..++..++..|. +|++++++++..+.. .+.............++-..+.++ +.+.|++|-.||
T Consensus 2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~t~d~~~--~~~aDiVIitag 78 (305)
T TIGR01763 2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTGTNNYAD--TANSDIVVITAG 78 (305)
T ss_pred CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEecCCHHH--hCCCCEEEEcCC
Confidence 57999996 9999999999999886 899999976543311 111110000000011111111222 357899999999
Q ss_pred CCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-C-CCeEEEEcc
Q 028043 161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-LKRIVLVSS 202 (214)
Q Consensus 161 ~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~-~~~iV~vSS 202 (214)
....+. +.-.+.+..|..-...+++.+.+ . ...||.+|-
T Consensus 79 ~p~~~~---~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~tN 119 (305)
T TIGR01763 79 LPRKPG---MSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVSN 119 (305)
T ss_pred CCCCcC---CCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 753211 12223456788888888777633 2 234555553
|
The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable. |
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0074 Score=47.00 Aligned_cols=46 Identities=26% Similarity=0.237 Sum_probs=38.9
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHh
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF 123 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~ 123 (214)
.++.+|+|+|.|+++-+|..+++.|.++|++|.++.|+.+.+.+..
T Consensus 40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~~l~~~l 85 (168)
T cd01080 40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTKNLKEHT 85 (168)
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCchhHHHHH
Confidence 3568999999998767899999999999999999999876665543
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >TIGR02355 moeB molybdopterin synthase sulfurylase MoeB | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.012 Score=48.41 Aligned_cols=36 Identities=28% Similarity=0.353 Sum_probs=30.4
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcCh
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDP 116 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~ 116 (214)
+++.+|+|.| .||+|+.+++.|+..|. +++++|.+.
T Consensus 22 L~~~~VlvvG-~GglGs~va~~La~~Gvg~i~lvD~D~ 58 (240)
T TIGR02355 22 LKASRVLIVG-LGGLGCAASQYLAAAGVGNLTLLDFDT 58 (240)
T ss_pred HhCCcEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence 4567899998 78999999999999997 588887763
|
This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899). |
| >PRK10537 voltage-gated potassium channel; Provisional | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0052 Score=54.23 Aligned_cols=71 Identities=10% Similarity=0.106 Sum_probs=55.3
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEecc
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~A 159 (214)
..+++|.| .|.+|+.++++|.++|.++++++.+.. ++.. ..+..++.+|.+|++.++++-.++.+.+|-..
T Consensus 240 k~HvII~G-~g~lg~~v~~~L~~~g~~vvVId~d~~--~~~~----~~g~~vI~GD~td~e~L~~AgI~~A~aVI~~t 310 (393)
T PRK10537 240 KDHFIICG-HSPLAINTYLGLRQRGQAVTVIVPLGL--EHRL----PDDADLIPGDSSDSAVLKKAGAARARAILALR 310 (393)
T ss_pred CCeEEEEC-CChHHHHHHHHHHHCCCCEEEEECchh--hhhc----cCCCcEEEeCCCCHHHHHhcCcccCCEEEEcC
Confidence 45799999 578999999999999999988886532 2211 24567899999999999886567888888654
|
|
| >PRK06849 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.004 Score=54.68 Aligned_cols=39 Identities=13% Similarity=0.008 Sum_probs=35.1
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHH
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA 119 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~ 119 (214)
+.|+|||||++..+|..+++.|.+.|++|++++.++...
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~ 41 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPL 41 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHH
Confidence 458999999999999999999999999999999886543
|
|
| >cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2 | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.016 Score=49.61 Aligned_cols=74 Identities=16% Similarity=0.232 Sum_probs=46.4
Q ss_pred EEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHH-------------------Hhccc----CCCCEEEEEecCC
Q 028043 84 LVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATT-------------------LFGKQ----DEETLQVCKGDTR 139 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~-------------------~~~~~----~~~~~~~v~~Di~ 139 (214)
+|+|.| .||+|.++++.|+..|. ++.++|.+.-.... +++.+ ....++.+..++.
T Consensus 1 kVlIVG-aGGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~ 79 (312)
T cd01489 1 KVLVVG-AGGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIK 79 (312)
T ss_pred CEEEEC-CCHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCC
Confidence 488999 59999999999999998 48888765322111 11111 1234555666676
Q ss_pred ChhccchhhhCCCcEEEecc
Q 028043 140 NPKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 140 d~~~v~~~~~~~~d~li~~A 159 (214)
+.+...+ .+.+.|+||.+.
T Consensus 80 ~~~~~~~-f~~~~DvVv~a~ 98 (312)
T cd01489 80 DPDFNVE-FFKQFDLVFNAL 98 (312)
T ss_pred CccchHH-HHhcCCEEEECC
Confidence 5322222 467788888765
|
UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2. |
| >PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0056 Score=55.23 Aligned_cols=76 Identities=18% Similarity=0.146 Sum_probs=51.8
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChh-HHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-KATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
+.+++|+|.|+ |++|.++++.|.++|++|+++++++. ......+.+...++.+..++-.. ....+|.||..
T Consensus 14 ~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~-------~~~~~D~Vv~s 85 (480)
T PRK01438 14 WQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGPGPT-------LPEDTDLVVTS 85 (480)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc-------ccCCCCEEEEC
Confidence 46789999995 88999999999999999999986543 22222222323455555443221 12458999999
Q ss_pred cCCCC
Q 028043 159 TGTTA 163 (214)
Q Consensus 159 Ag~~~ 163 (214)
.|+..
T Consensus 86 ~Gi~~ 90 (480)
T PRK01438 86 PGWRP 90 (480)
T ss_pred CCcCC
Confidence 98753
|
|
| >PRK06718 precorrin-2 dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0037 Score=50.13 Aligned_cols=38 Identities=24% Similarity=0.268 Sum_probs=33.8
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP 116 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~ 116 (214)
.++++|+|+|.|| |.+|...++.|++.|++|+++++..
T Consensus 6 l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~ 43 (202)
T PRK06718 6 IDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL 43 (202)
T ss_pred EEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 3568999999995 9999999999999999999998754
|
|
| >PLN02928 oxidoreductase family protein | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0042 Score=53.94 Aligned_cols=83 Identities=14% Similarity=0.065 Sum_probs=50.6
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
..+.||++.|.| .|.||+++++.|...|.+|++.+|+..........+....+..........+++++ ++.+.|+|+.
T Consensus 155 ~~l~gktvGIiG-~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~e-ll~~aDiVvl 232 (347)
T PLN02928 155 DTLFGKTVFILG-YGAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYE-FAGEADIVVL 232 (347)
T ss_pred cCCCCCEEEEEC-CCHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHH-HHhhCCEEEE
Confidence 457899999999 69999999999999999999999864321110000000000000001112334554 4567888888
Q ss_pred ccCCC
Q 028043 158 CTGTT 162 (214)
Q Consensus 158 ~Ag~~ 162 (214)
+....
T Consensus 233 ~lPlt 237 (347)
T PLN02928 233 CCTLT 237 (347)
T ss_pred CCCCC
Confidence 77644
|
|
| >PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3 | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0074 Score=46.61 Aligned_cols=43 Identities=26% Similarity=0.281 Sum_probs=33.3
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHH
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATT 121 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~ 121 (214)
..+.||+++|.| =|.+|+.+|+.|...|++|+++..+|-++-+
T Consensus 19 ~~l~Gk~vvV~G-YG~vG~g~A~~lr~~Ga~V~V~e~DPi~alq 61 (162)
T PF00670_consen 19 LMLAGKRVVVIG-YGKVGKGIARALRGLGARVTVTEIDPIRALQ 61 (162)
T ss_dssp S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHH
T ss_pred eeeCCCEEEEeC-CCcccHHHHHHHhhCCCEEEEEECChHHHHH
Confidence 456899999999 8999999999999999999999999976533
|
3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C .... |
| >PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0048 Score=54.91 Aligned_cols=42 Identities=29% Similarity=0.264 Sum_probs=36.9
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHH
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATT 121 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~ 121 (214)
.+.|++|+|.|. |.||+.+++.|...|++|+++++++.+..+
T Consensus 209 ~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~ 250 (425)
T PRK05476 209 LIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQ 250 (425)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHH
Confidence 357899999994 899999999999999999999999876544
|
|
| >cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0032 Score=51.33 Aligned_cols=75 Identities=21% Similarity=0.116 Sum_probs=51.1
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchh---hhCCCcEEEe
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPA---IFEGVTHVIC 157 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~---~~~~~d~li~ 157 (214)
.+++++|+|+++ +|+.+++.+...|.+|+++++++++.+.+.+ .. .. ...|..+.+..+.. ..+++|++++
T Consensus 134 ~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g---~~-~~~~~~~~~~~~~~~~~~~~~~d~vi~ 207 (271)
T cd05188 134 PGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAKE-LG---AD-HVIDYKEEDLEEELRLTGGGGADVVID 207 (271)
T ss_pred CCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHHH-hC---Cc-eeccCCcCCHHHHHHHhcCCCCCEEEE
Confidence 567999999998 9999999999999999999998877665432 21 11 11233332222210 1246999999
Q ss_pred ccCC
Q 028043 158 CTGT 161 (214)
Q Consensus 158 ~Ag~ 161 (214)
++|.
T Consensus 208 ~~~~ 211 (271)
T cd05188 208 AVGG 211 (271)
T ss_pred CCCC
Confidence 9874
|
The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro |
| >cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.023 Score=45.38 Aligned_cols=35 Identities=23% Similarity=0.357 Sum_probs=28.9
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCe-EEEEEcC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRD 115 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~-V~~~~r~ 115 (214)
+++.+|+|.|+ ||+|.++++.|+..|.. ++++|.+
T Consensus 17 L~~s~VlviG~-gglGsevak~L~~~GVg~i~lvD~d 52 (198)
T cd01485 17 LRSAKVLIIGA-GALGAEIAKNLVLAGIDSITIVDHR 52 (198)
T ss_pred HhhCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEECC
Confidence 34578999985 55999999999999985 8888765
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol |
| >PRK08328 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.02 Score=46.86 Aligned_cols=36 Identities=25% Similarity=0.330 Sum_probs=30.6
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcCh
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDP 116 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~ 116 (214)
+++++|+|.| .||+|+++++.|+..|. +++++|.+.
T Consensus 25 L~~~~VlIiG-~GGlGs~ia~~La~~Gvg~i~lvD~D~ 61 (231)
T PRK08328 25 LKKAKVAVVG-VGGLGSPVAYYLAAAGVGRILLIDEQT 61 (231)
T ss_pred HhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 4567899999 78999999999999998 588887653
|
|
| >KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0027 Score=52.95 Aligned_cols=105 Identities=18% Similarity=0.152 Sum_probs=64.1
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCe---EEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEE
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIK---SRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVI 156 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~---V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li 156 (214)
..+-+|.|.||+||||+-+...|. .... +.+.|..... -....+...+-.......+-++.++++ +.+.|+||
T Consensus 26 ~~~~KVAvlGAaGGIGQPLSLLlK-~np~Vs~LaLYDi~~~~--GVaaDlSHI~T~s~V~g~~g~~~L~~a-l~~advVv 101 (345)
T KOG1494|consen 26 QRGLKVAVLGAAGGIGQPLSLLLK-LNPLVSELALYDIANTP--GVAADLSHINTNSSVVGFTGADGLENA-LKGADVVV 101 (345)
T ss_pred cCcceEEEEecCCccCccHHHHHh-cCcccceeeeeecccCC--cccccccccCCCCceeccCChhHHHHH-hcCCCEEE
Confidence 356789999999999999987664 4443 3344433211 111111111111122344445567764 78999999
Q ss_pred eccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc
Q 028043 157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP 191 (214)
Q Consensus 157 ~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~ 191 (214)
--||+..-|.+.- ++.+++|.--...+..++.
T Consensus 102 IPAGVPRKPGMTR---DDLFn~NAgIv~~l~~aia 133 (345)
T KOG1494|consen 102 IPAGVPRKPGMTR---DDLFNINAGIVKTLAAAIA 133 (345)
T ss_pred ecCCCCCCCCCcH---HHhhhcchHHHHHHHHHHH
Confidence 9999977554432 3467888887888887763
|
|
| >cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0063 Score=51.39 Aligned_cols=74 Identities=20% Similarity=0.182 Sum_probs=50.7
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCC--hhccchhhhCCCcEEEecc
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN--PKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d--~~~v~~~~~~~~d~li~~A 159 (214)
+.+++|.|++|++|..+++.+...|.+|+++++++++.+.+.+ +. +.. ..|..+ .+.+.+..-+++|+++.+.
T Consensus 147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g---~~~-v~~~~~~~~~~~~~~~~~~~d~vld~~ 221 (326)
T cd08289 147 QGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLKK-LG---AKE-VIPREELQEESIKPLEKQRWAGAVDPV 221 (326)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHHH-cC---CCE-EEcchhHHHHHHHhhccCCcCEEEECC
Confidence 5799999999999999999999999999999999888776542 22 111 122222 2223221113589999876
Q ss_pred C
Q 028043 160 G 160 (214)
Q Consensus 160 g 160 (214)
|
T Consensus 222 g 222 (326)
T cd08289 222 G 222 (326)
T ss_pred c
Confidence 5
|
yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH |
| >cd08230 glucose_DH Glucose dehydrogenase | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0089 Score=51.57 Aligned_cols=73 Identities=21% Similarity=0.241 Sum_probs=48.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEc---ChhHHHHHhcccCCCCEEEEEecCCChhccch-hhhCCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR---DPEKATTLFGKQDEETLQVCKGDTRNPKDLDP-AIFEGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r---~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~-~~~~~~d~li 156 (214)
.+++|+|+|+ |+||...++.+...|++|++++| ++++.+.+. ++ ++.. .|..+. ++.+ ...+++|++|
T Consensus 172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~-~~---Ga~~--v~~~~~-~~~~~~~~~~~d~vi 243 (355)
T cd08230 172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVE-EL---GATY--VNSSKT-PVAEVKLVGEFDLII 243 (355)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHH-Hc---CCEE--ecCCcc-chhhhhhcCCCCEEE
Confidence 5689999985 99999999888889999999998 455555333 22 2232 233322 1111 1124689999
Q ss_pred eccCC
Q 028043 157 CCTGT 161 (214)
Q Consensus 157 ~~Ag~ 161 (214)
.++|.
T Consensus 244 d~~g~ 248 (355)
T cd08230 244 EATGV 248 (355)
T ss_pred ECcCC
Confidence 99984
|
Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai |
| >PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.012 Score=50.47 Aligned_cols=70 Identities=17% Similarity=0.149 Sum_probs=49.8
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
..+.+|+|.|.| .|.||+.+++.|...|++|++.+|.....+ ++... ...+++++ ++.+.|+|+.
T Consensus 132 ~~l~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~~~~---------~~~~~----~~~~~l~e-~l~~aDvvv~ 196 (312)
T PRK15469 132 YHREDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRKSWP---------GVQSF----AGREELSA-FLSQTRVLIN 196 (312)
T ss_pred CCcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCCC---------Cceee----cccccHHH-HHhcCCEEEE
Confidence 456889999999 899999999999999999999988653211 11111 12334554 4677898887
Q ss_pred ccCCC
Q 028043 158 CTGTT 162 (214)
Q Consensus 158 ~Ag~~ 162 (214)
+....
T Consensus 197 ~lPlt 201 (312)
T PRK15469 197 LLPNT 201 (312)
T ss_pred CCCCC
Confidence 77543
|
|
| >PRK09880 L-idonate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0089 Score=51.36 Aligned_cols=74 Identities=20% Similarity=0.147 Sum_probs=50.4
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh--hCCCcEEEe
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--FEGVTHVIC 157 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~--~~~~d~li~ 157 (214)
.+++|+|+|+ |++|...++.+...|+ +|+++++++++.+.+.+ +. +.. ..|..+. ++.+.. .+++|++|.
T Consensus 169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~-lG---a~~-vi~~~~~-~~~~~~~~~g~~D~vid 241 (343)
T PRK09880 169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLARE-MG---ADK-LVNPQND-DLDHYKAEKGYFDVSFE 241 (343)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHH-cC---CcE-EecCCcc-cHHHHhccCCCCCEEEE
Confidence 4789999996 9999999998888998 58889999988775543 32 211 1233332 222211 235899999
Q ss_pred ccCC
Q 028043 158 CTGT 161 (214)
Q Consensus 158 ~Ag~ 161 (214)
++|.
T Consensus 242 ~~G~ 245 (343)
T PRK09880 242 VSGH 245 (343)
T ss_pred CCCC
Confidence 9884
|
|
| >PRK08223 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.019 Score=48.46 Aligned_cols=36 Identities=31% Similarity=0.347 Sum_probs=30.7
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRD 115 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~ 115 (214)
.+++.+|+|.| .||+|+.+++.|+..|. ++.++|.+
T Consensus 24 kL~~s~VlIvG-~GGLGs~va~~LA~aGVG~i~lvD~D 60 (287)
T PRK08223 24 RLRNSRVAIAG-LGGVGGIHLLTLARLGIGKFTIADFD 60 (287)
T ss_pred HHhcCCEEEEC-CCHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 34567899999 78999999999999998 58888775
|
|
| >cd05290 LDH_3 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.028 Score=48.03 Aligned_cols=98 Identities=13% Similarity=0.136 Sum_probs=64.0
Q ss_pred EEEEEcCchHHHHHHHHHHHHCCC--eEEEEEcChhHHHHHhcccC------C-CCEEEEEecCCChhccchhhhCCCcE
Q 028043 84 LVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQD------E-ETLQVCKGDTRNPKDLDPAIFEGVTH 154 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~------~-~~~~~v~~Di~d~~~v~~~~~~~~d~ 154 (214)
+|.|.|+ |.||..+|..|+.+|. ++++++.+++.++.....+. . ..+.+.. .|.+ .+.+.|+
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~---~~y~-----~~~~aDi 71 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRA---GDYD-----DCADADI 71 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEE---CCHH-----HhCCCCE
Confidence 4789997 9999999999998876 69999998765543222111 1 1233322 2222 2567999
Q ss_pred EEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc
Q 028043 155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP 191 (214)
Q Consensus 155 li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~ 191 (214)
||..||....|.+. .+-.+.+..|..-...+.+.+.
T Consensus 72 vvitaG~~~kpg~t-r~R~dll~~N~~I~~~i~~~i~ 107 (307)
T cd05290 72 IVITAGPSIDPGNT-DDRLDLAQTNAKIIREIMGNIT 107 (307)
T ss_pred EEECCCCCCCCCCC-chHHHHHHHHHHHHHHHHHHHH
Confidence 99999986533211 0014456888888888888774
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0069 Score=50.59 Aligned_cols=76 Identities=16% Similarity=0.204 Sum_probs=51.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhc---cchhhh-CCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD---LDPAIF-EGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~---v~~~~~-~~~d~li 156 (214)
.+++++|+|++|++|..+++.+...|++|+++.+++++.+.+ .... +.. ..+..+.+. +.+..- +++|.++
T Consensus 139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g---~~~-~~~~~~~~~~~~~~~~~~~~~~d~~i 213 (325)
T TIGR02824 139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EALG---ADI-AINYREEDFVEVVKAETGGKGVDVIL 213 (325)
T ss_pred CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcC---CcE-EEecCchhHHHHHHHHcCCCCeEEEE
Confidence 468999999999999999999999999999999988776644 2221 111 122222221 222111 2589999
Q ss_pred eccCC
Q 028043 157 CCTGT 161 (214)
Q Consensus 157 ~~Ag~ 161 (214)
+++|.
T Consensus 214 ~~~~~ 218 (325)
T TIGR02824 214 DIVGG 218 (325)
T ss_pred ECCch
Confidence 98763
|
Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized. |
| >cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy) | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0074 Score=53.55 Aligned_cols=44 Identities=27% Similarity=0.267 Sum_probs=38.2
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHh
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF 123 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~ 123 (214)
.+.|++|+|.| .|.||+.+++.+...|++|+++++++.+++...
T Consensus 199 ~l~GktVvViG-~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~ 242 (413)
T cd00401 199 MIAGKVAVVAG-YGDVGKGCAQSLRGQGARVIVTEVDPICALQAA 242 (413)
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECChhhHHHHH
Confidence 35789999999 678999999999999999999999988766543
|
The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+. |
| >cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.031 Score=45.81 Aligned_cols=35 Identities=31% Similarity=0.397 Sum_probs=30.2
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRD 115 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~ 115 (214)
+++++|+|.| .||+|+++++.|+..|. +++++|.+
T Consensus 9 L~~~~VlVvG-~GGvGs~va~~Lar~GVg~i~LvD~D 44 (231)
T cd00755 9 LRNAHVAVVG-LGGVGSWAAEALARSGVGKLTLIDFD 44 (231)
T ss_pred HhCCCEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 3567899999 79999999999999998 68888765
|
coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PRK12550 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.007 Score=50.79 Aligned_cols=67 Identities=21% Similarity=0.240 Sum_probs=49.1
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
+++++|.| +||.+++++..|++.|. +|.++.|++++.+++.+.+. .+.. +.+. ....|+|||+-.
T Consensus 122 ~~~vlilG-aGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~--------~~~~--~~~~---~~~~dlvINaTp 187 (272)
T PRK12550 122 DLVVALRG-SGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYG--------YEWR--PDLG---GIEADILVNVTP 187 (272)
T ss_pred CCeEEEEC-CcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhC--------Ccch--hhcc---cccCCEEEECCc
Confidence 46899999 59999999999999998 59999999998888765431 1111 1111 135799999875
Q ss_pred CC
Q 028043 161 TT 162 (214)
Q Consensus 161 ~~ 162 (214)
..
T Consensus 188 ~G 189 (272)
T PRK12550 188 IG 189 (272)
T ss_pred cc
Confidence 44
|
|
| >PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.012 Score=53.69 Aligned_cols=79 Identities=18% Similarity=0.122 Sum_probs=55.8
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChh------------cc---
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK------------DL--- 144 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~------------~v--- 144 (214)
..+.+|+|+| .|.+|...+..+...|++|+++++++++++...+ + +.+++..|..+.+ +.
T Consensus 163 ~pg~kVlViG-aG~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes-l---GA~~v~i~~~e~~~~~~gya~~~s~~~~~~ 237 (509)
T PRK09424 163 VPPAKVLVIG-AGVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES-M---GAEFLELDFEEEGGSGDGYAKVMSEEFIKA 237 (509)
T ss_pred cCCCEEEEEC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c---CCeEEEeccccccccccchhhhcchhHHHH
Confidence 3578999999 7999999999999999999999999998876553 2 3343434433211 10
Q ss_pred -chhh---hCCCcEEEeccCCCC
Q 028043 145 -DPAI---FEGVTHVICCTGTTA 163 (214)
Q Consensus 145 -~~~~---~~~~d~li~~Ag~~~ 163 (214)
.+.+ .+++|++|.++|...
T Consensus 238 ~~~~~~~~~~gaDVVIetag~pg 260 (509)
T PRK09424 238 EMALFAEQAKEVDIIITTALIPG 260 (509)
T ss_pred HHHHHHhccCCCCEEEECCCCCc
Confidence 0111 246999999999743
|
|
| >cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.011 Score=49.37 Aligned_cols=43 Identities=21% Similarity=0.230 Sum_probs=38.1
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHh
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF 123 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~ 123 (214)
.+++++|+|++|++|..+++.+...|++|+.++++.++.+.+.
T Consensus 144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~ 186 (328)
T cd08268 144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDALL 186 (328)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH
Confidence 4679999999999999999999999999999999887766653
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0098 Score=47.82 Aligned_cols=72 Identities=24% Similarity=0.225 Sum_probs=50.3
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChh-HHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-KATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
++.||+|+|.| +|.+|..-++.|++.|++|++++.+.. .++++.+ ..+++++..+... +. +.+.|.||-
T Consensus 6 ~l~gk~vlVvG-gG~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~---~~~i~~~~~~~~~-~d-----l~~~~lVi~ 75 (205)
T TIGR01470 6 NLEGRAVLVVG-GGDVALRKARLLLKAGAQLRVIAEELESELTLLAE---QGGITWLARCFDA-DI-----LEGAFLVIA 75 (205)
T ss_pred EcCCCeEEEEC-cCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHH---cCCEEEEeCCCCH-HH-----hCCcEEEEE
Confidence 46789999999 689999999999999999999987653 3333332 2357777766652 21 345666664
Q ss_pred ccC
Q 028043 158 CTG 160 (214)
Q Consensus 158 ~Ag 160 (214)
+-+
T Consensus 76 at~ 78 (205)
T TIGR01470 76 ATD 78 (205)
T ss_pred CCC
Confidence 443
|
This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms. |
| >cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.0098 Score=50.37 Aligned_cols=43 Identities=30% Similarity=0.251 Sum_probs=37.7
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHh
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF 123 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~ 123 (214)
.+..++|.|++|.+|..+++.+...|.+|+.+++++++.+.+.
T Consensus 139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~ 181 (329)
T cd08250 139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLK 181 (329)
T ss_pred CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHH
Confidence 4679999999999999999988899999999999887776653
|
Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. |
| >PRK05600 thiamine biosynthesis protein ThiF; Validated | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.018 Score=50.44 Aligned_cols=80 Identities=20% Similarity=0.253 Sum_probs=51.7
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChh-------------------HHHHHhccc----CCCCEEE
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPE-------------------KATTLFGKQ----DEETLQV 133 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~-------------------~~~~~~~~~----~~~~~~~ 133 (214)
..+++.+|+|.| .||+|..+++.|+..|. +++++|.+.- +.+.+++.+ ...+++.
T Consensus 37 ~~l~~~~VliiG-~GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~ 115 (370)
T PRK05600 37 ERLHNARVLVIG-AGGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNA 115 (370)
T ss_pred HHhcCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEE
Confidence 345677899999 68999999999999997 7888887621 111111111 1234555
Q ss_pred EEecCCChhccchhhhCCCcEEEeccC
Q 028043 134 CKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 134 v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
+...++ .+.+.+ ++.+.|+||.+.-
T Consensus 116 ~~~~i~-~~~~~~-~~~~~DlVid~~D 140 (370)
T PRK05600 116 LRERLT-AENAVE-LLNGVDLVLDGSD 140 (370)
T ss_pred eeeecC-HHHHHH-HHhCCCEEEECCC
Confidence 555554 333443 4678899887763
|
|
| >PLN02586 probable cinnamyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.0092 Score=51.81 Aligned_cols=75 Identities=16% Similarity=0.203 Sum_probs=49.8
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
.+++|+|.|+ |+||..+++.+...|++|++++.+.++..+..+++. +.. ..|..+.+.+.+ ..+++|++|.+.|
T Consensus 183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~G---a~~-vi~~~~~~~~~~-~~~~~D~vid~~g 256 (360)
T PLN02586 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLG---ADS-FLVSTDPEKMKA-AIGTMDYIIDTVS 256 (360)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCC---CcE-EEcCCCHHHHHh-hcCCCCEEEECCC
Confidence 4789999775 999999999988899999888877665544433332 221 123333334443 2356899998887
Q ss_pred C
Q 028043 161 T 161 (214)
Q Consensus 161 ~ 161 (214)
.
T Consensus 257 ~ 257 (360)
T PLN02586 257 A 257 (360)
T ss_pred C
Confidence 3
|
|
| >COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.0081 Score=53.12 Aligned_cols=75 Identities=27% Similarity=0.333 Sum_probs=58.4
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
++++++++|.| .|-+|.-+++.|+++|. +|+++.|+.++.+++++++. +++...+.+.. .+...|+||.
T Consensus 175 ~L~~~~vlvIG-AGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~--------~~~~~l~el~~-~l~~~DvVis 244 (414)
T COG0373 175 SLKDKKVLVIG-AGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG--------AEAVALEELLE-ALAEADVVIS 244 (414)
T ss_pred ccccCeEEEEc-ccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC--------CeeecHHHHHH-hhhhCCEEEE
Confidence 46789999999 68899999999999995 69999999999999887664 23334444444 3567888888
Q ss_pred ccCCCC
Q 028043 158 CTGTTA 163 (214)
Q Consensus 158 ~Ag~~~ 163 (214)
+-|..+
T Consensus 245 sTsa~~ 250 (414)
T COG0373 245 STSAPH 250 (414)
T ss_pred ecCCCc
Confidence 877654
|
|
| >PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.02 Score=50.53 Aligned_cols=35 Identities=26% Similarity=0.376 Sum_probs=30.1
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRD 115 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~ 115 (214)
++..+|+|.| .||+|..+++.|+..|. ++.++|.+
T Consensus 40 L~~~~VlviG-~GGlGs~va~~La~~Gvg~i~lvD~D 75 (392)
T PRK07878 40 LKNARVLVIG-AGGLGSPTLLYLAAAGVGTLGIVEFD 75 (392)
T ss_pred HhcCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCC
Confidence 4567899999 78999999999999998 58887765
|
|
| >TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.0067 Score=52.75 Aligned_cols=75 Identities=17% Similarity=0.131 Sum_probs=50.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCC-h----hccchhhhCCCcE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN-P----KDLDPAIFEGVTH 154 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d-~----~~v~~~~~~~~d~ 154 (214)
.+.+|+|+|+ |+||...++.+...|+ +|+++++++++.+.+.+ +. +. ...|..+ . +.+.+..-+++|+
T Consensus 185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~-~G---a~-~~i~~~~~~~~~~~~v~~~~~~g~d~ 258 (368)
T TIGR02818 185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELAKK-LG---AT-DCVNPNDYDKPIQEVIVEITDGGVDY 258 (368)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-hC---CC-eEEcccccchhHHHHHHHHhCCCCCE
Confidence 4689999985 9999999998888998 79999999888766532 22 11 1223332 1 1222211236999
Q ss_pred EEeccCC
Q 028043 155 VICCTGT 161 (214)
Q Consensus 155 li~~Ag~ 161 (214)
+|.++|.
T Consensus 259 vid~~G~ 265 (368)
T TIGR02818 259 SFECIGN 265 (368)
T ss_pred EEECCCC
Confidence 9999874
|
The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols. |
| >KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.0036 Score=53.20 Aligned_cols=72 Identities=18% Similarity=0.293 Sum_probs=51.4
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCC-ChhccchhhhC----CCcEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTR-NPKDLDPAIFE----GVTHV 155 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~-d~~~v~~~~~~----~~d~l 155 (214)
.||.+.|+|+.| +|.--++.-.+.|++|+++++...+.++..+.+. .+.+ .|.+ |++.+++ +.+ .+|.+
T Consensus 181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LG---Ad~f-v~~~~d~d~~~~-~~~~~dg~~~~v 254 (360)
T KOG0023|consen 181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLG---ADVF-VDSTEDPDIMKA-IMKTTDGGIDTV 254 (360)
T ss_pred CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcC---ccee-EEecCCHHHHHH-HHHhhcCcceee
Confidence 689999999887 9988888777899999999999866666665443 3333 3455 7777765 344 34555
Q ss_pred Eec
Q 028043 156 ICC 158 (214)
Q Consensus 156 i~~ 158 (214)
.|.
T Consensus 255 ~~~ 257 (360)
T KOG0023|consen 255 SNL 257 (360)
T ss_pred eec
Confidence 544
|
|
| >COG2085 Predicted dinucleotide-binding enzymes [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.0041 Score=49.87 Aligned_cols=40 Identities=10% Similarity=0.121 Sum_probs=30.4
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChh-HHHHHh
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-KATTLF 123 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~-~~~~~~ 123 (214)
|++.| ||+|.||..++++|++.|++|++..|+.+ +.+...
T Consensus 2 ~~~~i-~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a 42 (211)
T COG2085 2 MIIAI-IGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAA 42 (211)
T ss_pred cEEEE-eccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHH
Confidence 45555 45999999999999999999999866544 444433
|
|
| >TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.0087 Score=47.93 Aligned_cols=35 Identities=31% Similarity=0.338 Sum_probs=31.2
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRD 115 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~ 115 (214)
+..++|+|.|+ ||+|+.+++.|++.|. +++++|++
T Consensus 19 L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 19 LEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred HhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence 45678999994 8999999999999999 69999887
|
Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter. |
| >PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.0033 Score=53.52 Aligned_cols=38 Identities=24% Similarity=0.302 Sum_probs=34.3
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHH
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATT 121 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~ 121 (214)
++|.|.| .|.+|..++..|+++|++|++.+|+++..+.
T Consensus 3 ~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~ 40 (308)
T PRK06129 3 GSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAAAAA 40 (308)
T ss_pred cEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHHHHH
Confidence 5799999 8999999999999999999999999876654
|
|
| >PRK07574 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.013 Score=51.54 Aligned_cols=72 Identities=17% Similarity=0.083 Sum_probs=49.6
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
..+.+|+|.|.| .|.||+.+++.|...|++|+..+|.....+. .. ..++. -..++++ ++...|+|+.
T Consensus 188 ~~L~gktVGIvG-~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~-~~---~~g~~-------~~~~l~e-ll~~aDvV~l 254 (385)
T PRK07574 188 YDLEGMTVGIVG-AGRIGLAVLRRLKPFDVKLHYTDRHRLPEEV-EQ---ELGLT-------YHVSFDS-LVSVCDVVTI 254 (385)
T ss_pred eecCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCCCchhh-Hh---hcCce-------ecCCHHH-HhhcCCEEEE
Confidence 457899999999 6899999999999999999999987532211 11 11111 1123443 3577899888
Q ss_pred ccCCC
Q 028043 158 CTGTT 162 (214)
Q Consensus 158 ~Ag~~ 162 (214)
+....
T Consensus 255 ~lPlt 259 (385)
T PRK07574 255 HCPLH 259 (385)
T ss_pred cCCCC
Confidence 77643
|
|
| >PLN03139 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.014 Score=51.35 Aligned_cols=70 Identities=21% Similarity=0.150 Sum_probs=48.8
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
..+.||+|.|.| .|.||+.+++.|...|++|+..+|.....+... ..++. -.+++++ ++...|+|+.
T Consensus 195 ~~L~gktVGIVG-~G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~----~~g~~-------~~~~l~e-ll~~sDvV~l 261 (386)
T PLN03139 195 YDLEGKTVGTVG-AGRIGRLLLQRLKPFNCNLLYHDRLKMDPELEK----ETGAK-------FEEDLDA-MLPKCDVVVI 261 (386)
T ss_pred cCCCCCEEEEEe-ecHHHHHHHHHHHHCCCEEEEECCCCcchhhHh----hcCce-------ecCCHHH-HHhhCCEEEE
Confidence 467899999999 799999999999999999999988643222111 11111 1123444 3567899888
Q ss_pred ccC
Q 028043 158 CTG 160 (214)
Q Consensus 158 ~Ag 160 (214)
+..
T Consensus 262 ~lP 264 (386)
T PLN03139 262 NTP 264 (386)
T ss_pred eCC
Confidence 764
|
|
| >PLN02494 adenosylhomocysteinase | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.0092 Score=53.61 Aligned_cols=39 Identities=23% Similarity=0.317 Sum_probs=35.3
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHH
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA 119 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~ 119 (214)
+.||+++|.| .|.||+.+++.+...|++|+++++++.+.
T Consensus 252 LaGKtVvViG-yG~IGr~vA~~aka~Ga~VIV~e~dp~r~ 290 (477)
T PLN02494 252 IAGKVAVICG-YGDVGKGCAAAMKAAGARVIVTEIDPICA 290 (477)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCchhh
Confidence 5789999999 67999999999999999999999988654
|
|
| >cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.01 Score=50.65 Aligned_cols=75 Identities=17% Similarity=0.168 Sum_probs=50.7
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCe-EEEEEcChhHHHHHhcccCCCCEEEEEecCCChh--ccchhhhC-CCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK--DLDPAIFE-GVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~--~v~~~~~~-~~d~li 156 (214)
.+.+|+|+|+ |++|..+++.+...|++ |+++++++++.+.+. ++. +. ...|..+.+ .+.+..-+ ++|++|
T Consensus 163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~-~~g---a~-~~i~~~~~~~~~~~~~~~~~~~d~vi 236 (339)
T cd08239 163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELAK-ALG---AD-FVINSGQDDVQEIRELTSGAGADVAI 236 (339)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhC---CC-EEEcCCcchHHHHHHHhCCCCCCEEE
Confidence 4789999985 99999999999899999 999999888776543 222 11 123333322 23221112 689999
Q ss_pred eccCC
Q 028043 157 CCTGT 161 (214)
Q Consensus 157 ~~Ag~ 161 (214)
.+.|.
T Consensus 237 d~~g~ 241 (339)
T cd08239 237 ECSGN 241 (339)
T ss_pred ECCCC
Confidence 88774
|
MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at |
| >cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2 | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.012 Score=49.61 Aligned_cols=76 Identities=18% Similarity=0.217 Sum_probs=51.9
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChh---ccchhhh-CCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK---DLDPAIF-EGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~---~v~~~~~-~~~d~li 156 (214)
.+.+++|.|++|.+|.++++.+...|++|+++.++.++.+.+.+ . + +.. ..+..+.+ .+.+..- .++|+++
T Consensus 139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~-~-g--~~~-~~~~~~~~~~~~i~~~~~~~~~d~v~ 213 (324)
T cd08292 139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRA-L-G--IGP-VVSTEQPGWQDKVREAAGGAPISVAL 213 (324)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHh-c-C--CCE-EEcCCCchHHHHHHHHhCCCCCcEEE
Confidence 46899999999999999999999999999999998887766643 2 2 211 11222221 2222111 2689999
Q ss_pred eccCC
Q 028043 157 CCTGT 161 (214)
Q Consensus 157 ~~Ag~ 161 (214)
.+.|.
T Consensus 214 d~~g~ 218 (324)
T cd08292 214 DSVGG 218 (324)
T ss_pred ECCCC
Confidence 88764
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina |
| >PTZ00075 Adenosylhomocysteinase; Provisional | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.011 Score=53.13 Aligned_cols=41 Identities=27% Similarity=0.250 Sum_probs=36.0
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHH
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA 119 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~ 119 (214)
..+.||+++|.| .|.||+.+++.|...|++|+++.+++.+.
T Consensus 250 ~~LaGKtVgVIG-~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a 290 (476)
T PTZ00075 250 VMIAGKTVVVCG-YGDVGKGCAQALRGFGARVVVTEIDPICA 290 (476)
T ss_pred CCcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCchhH
Confidence 357899999999 56799999999999999999998887655
|
|
| >cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.043 Score=43.77 Aligned_cols=35 Identities=23% Similarity=0.299 Sum_probs=29.1
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCe-EEEEEcC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRD 115 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~-V~~~~r~ 115 (214)
+++++|+|.| .||+|.++++.|+..|.. ++++|.+
T Consensus 19 L~~s~VlIiG-~gglG~evak~La~~GVg~i~lvD~d 54 (197)
T cd01492 19 LRSARILLIG-LKGLGAEIAKNLVLSGIGSLTILDDR 54 (197)
T ss_pred HHhCcEEEEc-CCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 4567899998 566999999999999985 8888765
|
Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain. |
| >cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2 | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.0096 Score=48.58 Aligned_cols=36 Identities=14% Similarity=0.237 Sum_probs=32.1
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCC---eEEEEEcC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI---KSRLLLRD 115 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~---~V~~~~r~ 115 (214)
.+++++++|.|| |+.|+.+++.|.+.|. +|++++|+
T Consensus 22 ~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~ 60 (226)
T cd05311 22 KIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSK 60 (226)
T ss_pred CccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence 356789999995 9999999999999997 49999998
|
Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph |
| >PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.0074 Score=46.51 Aligned_cols=42 Identities=24% Similarity=0.295 Sum_probs=35.7
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhc
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFG 124 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~ 124 (214)
|++|-+.| .|-+|+.+++.|++.|++|.+.+|++++.+++.+
T Consensus 1 m~~Ig~IG-lG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~ 42 (163)
T PF03446_consen 1 MMKIGFIG-LGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAE 42 (163)
T ss_dssp -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHH
T ss_pred CCEEEEEc-hHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHH
Confidence 46899999 6999999999999999999999999998877653
|
1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A .... |
| >PRK12480 D-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.028 Score=48.48 Aligned_cols=40 Identities=15% Similarity=0.154 Sum_probs=35.8
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhH
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK 118 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~ 118 (214)
..+.+|+|.|.| .|.||+.+++.|...|++|++.+|++..
T Consensus 142 ~~l~g~~VgIIG-~G~IG~~vA~~L~~~G~~V~~~d~~~~~ 181 (330)
T PRK12480 142 KPVKNMTVAIIG-TGRIGAATAKIYAGFGATITAYDAYPNK 181 (330)
T ss_pred cccCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEeCChhH
Confidence 457899999998 7999999999999999999999998754
|
|
| >PLN02178 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.016 Score=50.72 Aligned_cols=75 Identities=19% Similarity=0.221 Sum_probs=50.4
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
.+.+++|.|+ |+||...++.+...|++|++++++.++..+..+.+. +.. ..|..+.+.+.+. .+++|+++.+.|
T Consensus 178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lG---a~~-~i~~~~~~~v~~~-~~~~D~vid~~G 251 (375)
T PLN02178 178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLG---ADS-FLVTTDSQKMKEA-VGTMDFIIDTVS 251 (375)
T ss_pred CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCC---CcE-EEcCcCHHHHHHh-hCCCcEEEECCC
Confidence 4689999986 999999999988999999999887655333333332 221 1233333344432 356899999887
Q ss_pred C
Q 028043 161 T 161 (214)
Q Consensus 161 ~ 161 (214)
.
T Consensus 252 ~ 252 (375)
T PLN02178 252 A 252 (375)
T ss_pred c
Confidence 4
|
|
| >PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.0017 Score=47.57 Aligned_cols=71 Identities=15% Similarity=0.147 Sum_probs=40.0
Q ss_pred EEEEEcCchHHHHHHHHHHHHC-CCeEE-EEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhhhCCCcEEEecc
Q 028043 84 LVLVAGGSGGVGQLVVASLLSR-NIKSR-LLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~-G~~V~-~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~A 159 (214)
+|.|.||+|.+|+.+++.|.+. ..+++ +++++.+....+....+ ...-....-| .+ .+ .+.++|++|.+.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~---~~--~~~~~Dvvf~a~ 74 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED-AD---PE--ELSDVDVVFLAL 74 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE-TS---GH--HHTTESEEEE-S
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEee-cc---hh--HhhcCCEEEecC
Confidence 5899999999999999999984 34544 45555523222221111 0111111112 22 22 247899999987
Q ss_pred C
Q 028043 160 G 160 (214)
Q Consensus 160 g 160 (214)
+
T Consensus 75 ~ 75 (121)
T PF01118_consen 75 P 75 (121)
T ss_dssp C
T ss_pred c
Confidence 5
|
This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C .... |
| >PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.019 Score=51.38 Aligned_cols=75 Identities=20% Similarity=0.230 Sum_probs=51.4
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhH--HHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK--ATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
+.+|+|+|+|+ |++|.++++.|+++|++|.+.+.++.. .+++.+ . ..++.+..++..+ ..+.+.|.||.
T Consensus 3 ~~~~~~~v~G~-g~~G~~~a~~l~~~g~~v~~~d~~~~~~~~~~l~~-~-~~gi~~~~g~~~~------~~~~~~d~vv~ 73 (445)
T PRK04308 3 FQNKKILVAGL-GGTGISMIAYLRKNGAEVAAYDAELKPERVAQIGK-M-FDGLVFYTGRLKD------ALDNGFDILAL 73 (445)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCchhHHHHhh-c-cCCcEEEeCCCCH------HHHhCCCEEEE
Confidence 45789999996 589999999999999999999876543 222211 0 1245544433221 12357899999
Q ss_pred ccCCCC
Q 028043 158 CTGTTA 163 (214)
Q Consensus 158 ~Ag~~~ 163 (214)
..|+..
T Consensus 74 spgi~~ 79 (445)
T PRK04308 74 SPGISE 79 (445)
T ss_pred CCCCCC
Confidence 999863
|
|
| >cd01487 E1_ThiF_like E1_ThiF_like | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.012 Score=46.00 Aligned_cols=73 Identities=18% Similarity=0.223 Sum_probs=46.9
Q ss_pred EEEEEcCchHHHHHHHHHHHHCCCe-EEEEEcCh---hH---------------HHHHhccc----CCCCEEEEEecCCC
Q 028043 84 LVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRDP---EK---------------ATTLFGKQ----DEETLQVCKGDTRN 140 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~G~~-V~~~~r~~---~~---------------~~~~~~~~----~~~~~~~v~~Di~d 140 (214)
+|+|.| .||+|..+++.|+..|.. ++++|.+. +. .+.+.+.+ +..+++.+...+.+
T Consensus 1 ~VlViG-~GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~~ 79 (174)
T cd01487 1 KVGIAG-AGGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKIDE 79 (174)
T ss_pred CEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecCh
Confidence 478888 699999999999999994 99998874 11 11111111 12234445555543
Q ss_pred hhccchhhhCCCcEEEecc
Q 028043 141 PKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 141 ~~~v~~~~~~~~d~li~~A 159 (214)
+.+.+ .+++.|+||.+.
T Consensus 80 -~~~~~-~l~~~DlVi~~~ 96 (174)
T cd01487 80 -NNLEG-LFGDCDIVVEAF 96 (174)
T ss_pred -hhHHH-HhcCCCEEEECC
Confidence 34443 467889888774
|
Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.01 Score=50.40 Aligned_cols=106 Identities=14% Similarity=0.169 Sum_probs=60.9
Q ss_pred EEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccC------CCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 85 VLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQD------EETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 85 vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~------~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
|.|.|| |.+|..++..|+..|. +|++++++++.++.....+. ..... +.. -+| .+ .+.+.|+||.
T Consensus 1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~-I~~-t~d---~~--~l~dADiVIi 72 (300)
T cd01339 1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTK-VTG-TND---YE--DIAGSDVVVI 72 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeE-EEE-cCC---HH--HhCCCCEEEE
Confidence 468897 9999999999998876 99999998765432111110 11111 111 012 22 2568999999
Q ss_pred ccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-C-CCeEEEEc
Q 028043 158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-LKRIVLVS 201 (214)
Q Consensus 158 ~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~-~~~iV~vS 201 (214)
++|....+. ..-.+....|+.-...+++.+.+ . ...+|++|
T Consensus 73 t~g~p~~~~---~~r~e~~~~n~~i~~~i~~~i~~~~p~~~iIv~s 115 (300)
T cd01339 73 TAGIPRKPG---MSRDDLLGTNAKIVKEVAENIKKYAPNAIVIVVT 115 (300)
T ss_pred ecCCCCCcC---CCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 999753221 11122334566666666666533 2 23444444
|
Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas |
| >PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.01 Score=41.18 Aligned_cols=66 Identities=23% Similarity=0.314 Sum_probs=45.3
Q ss_pred EEEEEcCchHHHHHHHHHHHHCC---CeEEEE-EcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEecc
Q 028043 84 LVLVAGGSGGVGQLVVASLLSRN---IKSRLL-LRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~G---~~V~~~-~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~A 159 (214)
+|.|. |+|.+|.++++.|++.| ++|.+. .|++++.+++.++.. +..... ++.+ +.+..|+||.+.
T Consensus 1 kI~iI-G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~---~~~~~~--~~~~-----~~~~advvilav 69 (96)
T PF03807_consen 1 KIGII-GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYG---VQATAD--DNEE-----AAQEADVVILAV 69 (96)
T ss_dssp EEEEE-STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCT---TEEESE--EHHH-----HHHHTSEEEE-S
T ss_pred CEEEE-CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhc---cccccC--ChHH-----hhccCCEEEEEE
Confidence 35666 48999999999999999 899955 999999988866543 111111 1111 234689999877
Q ss_pred C
Q 028043 160 G 160 (214)
Q Consensus 160 g 160 (214)
-
T Consensus 70 ~ 70 (96)
T PF03807_consen 70 K 70 (96)
T ss_dssp -
T ss_pred C
Confidence 4
|
It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D .... |
| >cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.021 Score=47.66 Aligned_cols=44 Identities=30% Similarity=0.402 Sum_probs=39.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhc
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFG 124 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~ 124 (214)
.+.+++|+|++|++|..+++.+...|++|+.+++++++.+.+.+
T Consensus 132 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~ 175 (305)
T cd08270 132 LGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGLRE 175 (305)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 47899999999999999999999999999999998887766543
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.0049 Score=53.35 Aligned_cols=68 Identities=24% Similarity=0.351 Sum_probs=41.7
Q ss_pred EEEEEcCchHHHHHHHHHHHHCCCeEE---EEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 84 LVLVAGGSGGVGQLVVASLLSRNIKSR---LLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~G~~V~---~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
+|.|.||+|++|+++++.|.++|+.++ .++++.+..+.+. + .+......|+. .+ .+.++|++|-++|
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~--~--~~~~~~~~~~~-~~-----~~~~~D~v~~a~g 70 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRKVT--F--KGKELEVNEAK-IE-----SFEGIDIALFSAG 70 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCeee--e--CCeeEEEEeCC-hH-----HhcCCCEEEECCC
Confidence 479999999999999999999888643 4445543333221 1 12344445553 11 1245677666665
Q ss_pred C
Q 028043 161 T 161 (214)
Q Consensus 161 ~ 161 (214)
.
T Consensus 71 ~ 71 (339)
T TIGR01296 71 G 71 (339)
T ss_pred H
Confidence 4
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978. |
| >PLN02740 Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.0094 Score=52.09 Aligned_cols=75 Identities=20% Similarity=0.176 Sum_probs=51.2
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCCh-----hccchhhhCCCcE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP-----KDLDPAIFEGVTH 154 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~-----~~v~~~~~~~~d~ 154 (214)
.+.+|+|.|+ |+||...++.+...|+ +|+++++++++.+.+.+ +. +.. ..|..+. +.+.+..-+++|+
T Consensus 198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~-~G---a~~-~i~~~~~~~~~~~~v~~~~~~g~dv 271 (381)
T PLN02740 198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKGKE-MG---ITD-FINPKDSDKPVHERIREMTGGGVDY 271 (381)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHH-cC---CcE-EEecccccchHHHHHHHHhCCCCCE
Confidence 5789999995 9999999999888999 59999999888776543 22 211 1233322 1233211126999
Q ss_pred EEeccCC
Q 028043 155 VICCTGT 161 (214)
Q Consensus 155 li~~Ag~ 161 (214)
+|.++|.
T Consensus 272 vid~~G~ 278 (381)
T PLN02740 272 SFECAGN 278 (381)
T ss_pred EEECCCC
Confidence 9999984
|
|
| >TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.058 Score=49.17 Aligned_cols=107 Identities=17% Similarity=0.130 Sum_probs=67.9
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCC-------------hhccch-
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN-------------PKDLDP- 146 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d-------------~~~v~~- 146 (214)
.+.+++|.| .|.+|...++.+...|++|+++++++++++.... + +.+++..|..+ .+..++
T Consensus 163 p~akVlViG-aG~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~-l---Ga~~v~v~~~e~g~~~~gYa~~~s~~~~~~~ 237 (511)
T TIGR00561 163 PPAKVLVIG-AGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS-M---GAEFLELDFKEEGGSGDGYAKVMSEEFIAAE 237 (511)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c---CCeEEeccccccccccccceeecCHHHHHHH
Confidence 457999999 5999999999999999999999999988766543 2 34455555421 111110
Q ss_pred -----hhhCCCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEEccccc
Q 028043 147 -----AIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGV 205 (214)
Q Consensus 147 -----~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~vSS~~~ 205 (214)
....+.|++|+++-+...+ .+. . -+...++.++++ ..||-+++..+
T Consensus 238 ~~~~~e~~~~~DIVI~TalipG~~-----aP~-L------it~emv~~MKpG-svIVDlA~d~G 288 (511)
T TIGR00561 238 MELFAAQAKEVDIIITTALIPGKP-----APK-L------ITEEMVDSMKAG-SVIVDLAAEQG 288 (511)
T ss_pred HHHHHHHhCCCCEEEECcccCCCC-----CCe-e------ehHHHHhhCCCC-CEEEEeeeCCC
Confidence 0135799999999443211 110 1 133445555665 56777777544
|
In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff. |
| >cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.019 Score=48.06 Aligned_cols=76 Identities=22% Similarity=0.261 Sum_probs=51.4
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCC-hhccchhhhCCCcEEEecc
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN-PKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d-~~~v~~~~~~~~d~li~~A 159 (214)
.+.+++|.|++|.+|..+++.+...|++|+.+++++++.+.+. .+. +..+..+-.+ .+.+.+. -+++|.++++.
T Consensus 142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g---~~~~~~~~~~~~~~i~~~-~~~~d~vl~~~ 216 (320)
T cd08243 142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALLK-ELG---ADEVVIDDGAIAEQLRAA-PGGFDKVLELV 216 (320)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcC---CcEEEecCccHHHHHHHh-CCCceEEEECC
Confidence 4689999999999999999999999999999999887766553 222 2222111111 1223222 13689999887
Q ss_pred CC
Q 028043 160 GT 161 (214)
Q Consensus 160 g~ 161 (214)
|.
T Consensus 217 ~~ 218 (320)
T cd08243 217 GT 218 (320)
T ss_pred Ch
Confidence 63
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.0079 Score=47.29 Aligned_cols=38 Identities=26% Similarity=0.327 Sum_probs=32.2
Q ss_pred EEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHH
Q 028043 84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTL 122 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~ 122 (214)
+|.|.|| |.+|+.++..++..|++|++.+++++.++..
T Consensus 1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~ 38 (180)
T PF02737_consen 1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERA 38 (180)
T ss_dssp EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHH
T ss_pred CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhh
Confidence 5889996 9999999999999999999999998876543
|
1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B .... |
| >PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.015 Score=49.39 Aligned_cols=78 Identities=19% Similarity=0.206 Sum_probs=54.6
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
++.||+|.|.|.++-+|+.++..|+++|++|+++.++...+++..+ +..++..=+.++..++... -+...+|-.
T Consensus 156 ~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~-----~ADIVIsavg~~~~v~~~~-ik~GaiVID 229 (301)
T PRK14194 156 DLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCR-----QADIVVAAVGRPRLIDADW-LKPGAVVID 229 (301)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHHh-----cCCEEEEecCChhcccHhh-ccCCcEEEE
Confidence 4689999999999999999999999999999999777655555432 1234444456666666532 234445545
Q ss_pred cCCC
Q 028043 159 TGTT 162 (214)
Q Consensus 159 Ag~~ 162 (214)
.|+.
T Consensus 230 vgin 233 (301)
T PRK14194 230 VGIN 233 (301)
T ss_pred eccc
Confidence 5544
|
|
| >TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.011 Score=51.39 Aligned_cols=100 Identities=16% Similarity=0.093 Sum_probs=55.5
Q ss_pred CEEEEEcCchHHHHHHHHHHHHC-CCeEEEE-EcChhHHHHHhcccCCCCEEEE-EecCCChhccchhhhCCCcEEEecc
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSR-NIKSRLL-LRDPEKATTLFGKQDEETLQVC-KGDTRNPKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~-G~~V~~~-~r~~~~~~~~~~~~~~~~~~~v-~~Di~d~~~v~~~~~~~~d~li~~A 159 (214)
++|.|.||||.+|+.+++.|.+. +.+++.+ +++.+..+.+.+... .+... ..++.+. +.++ +..++|++|.+.
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~~~~--~l~~~~~~~~~~~-~~~~-~~~~~DvVf~al 76 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPVSEVHP--HLRGLVDLNLEPI-DEEE-IAEDADVVFLAL 76 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCChHHhCc--cccccCCceeecC-CHHH-hhcCCCEEEECC
Confidence 47999999999999999999976 6677743 544422222211111 11111 1112211 1222 224799999888
Q ss_pred CCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEEccccc
Q 028043 160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGV 205 (214)
Q Consensus 160 g~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~vSS~~~ 205 (214)
+.. ....++..+.....+||=.|+..-
T Consensus 77 P~~-------------------~s~~~~~~~~~~G~~VIDlS~~fR 103 (346)
T TIGR01850 77 PHG-------------------VSAELAPELLAAGVKVIDLSADFR 103 (346)
T ss_pred Cch-------------------HHHHHHHHHHhCCCEEEeCChhhh
Confidence 632 233444444333367887777643
|
This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons. |
| >COG4982 3-oxoacyl-[acyl-carrier protein] | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.075 Score=49.11 Aligned_cols=126 Identities=21% Similarity=0.218 Sum_probs=77.0
Q ss_pred CCCCCCEEEEEcCc-hHHHHHHHHHHHHCCCeEEEEEcCh--hHHHH---HhcccC--CCCEEEEEecCCChhccchhh-
Q 028043 78 PASSSKLVLVAGGS-GGVGQLVVASLLSRNIKSRLLLRDP--EKATT---LFGKQD--EETLQVCKGDTRNPKDLDPAI- 148 (214)
Q Consensus 78 ~~~~~k~vlITGas-ggIG~~la~~L~~~G~~V~~~~r~~--~~~~~---~~~~~~--~~~~~~v~~Di~d~~~v~~~~- 148 (214)
....+|.++||||+ |.||.+++..|++-|++|+++.-+- ++.+- +..... +..+.++..+..+..+++..+
T Consensus 392 ~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIe 471 (866)
T COG4982 392 GTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIE 471 (866)
T ss_pred CCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHH
Confidence 44567999999987 7899999999999999999987643 23222 221111 344666778888777776532
Q ss_pred ---------h-------C---CCcEEEeccCCCCCCCCCCCC--CCchhHHHHHHHHHHHHHhcc-----CC---CeEEE
Q 028043 149 ---------F-------E---GVTHVICCTGTTAFPSRRWDG--DNTPEKVDWEGVRNLVSALPS-----SL---KRIVL 199 (214)
Q Consensus 149 ---------~-------~---~~d~li~~Ag~~~~~~~~~~~--~~~~~~vNv~g~~~l~~a~~~-----~~---~~iV~ 199 (214)
+ + .+|.+|-.|++.......... .+..+++-+.....++-.++. ++ -++|.
T Consensus 472 wIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsraE~~~rilLw~V~Rliggl~~~~s~r~v~~R~hVVL 551 (866)
T COG4982 472 WIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRAEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHVVL 551 (866)
T ss_pred HhccccccccCCcceecccccCcceeeecccCCccCccccCCchHHHHHHHHHHHHHHHHHHhhhhccccCcccceEEEe
Confidence 1 1 367888888865432211111 122335555566666655521 22 25777
Q ss_pred Eccc
Q 028043 200 VSSV 203 (214)
Q Consensus 200 vSS~ 203 (214)
-.|-
T Consensus 552 PgSP 555 (866)
T COG4982 552 PGSP 555 (866)
T ss_pred cCCC
Confidence 6664
|
|
| >cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase) | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.015 Score=50.49 Aligned_cols=75 Identities=16% Similarity=0.169 Sum_probs=50.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChh---ccchhhhCCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK---DLDPAIFEGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~---~v~~~~~~~~d~li 156 (214)
.+.+|+|.|+ |+||...++.+...|+ +|+++++++++.+.+.+ +. +. ...|..+.+ .+.+..-+++|++|
T Consensus 191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~-~G---a~-~~i~~~~~~~~~~i~~~~~~g~d~vi 264 (371)
T cd08281 191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALARE-LG---AT-ATVNAGDPNAVEQVRELTGGGVDYAF 264 (371)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHH-cC---Cc-eEeCCCchhHHHHHHHHhCCCCCEEE
Confidence 4689999985 8999999988888999 59999999888765432 21 21 123333322 22221113689999
Q ss_pred eccCC
Q 028043 157 CCTGT 161 (214)
Q Consensus 157 ~~Ag~ 161 (214)
.+.|.
T Consensus 265 d~~G~ 269 (371)
T cd08281 265 EMAGS 269 (371)
T ss_pred ECCCC
Confidence 98874
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd |
| >PRK07411 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.036 Score=48.92 Aligned_cols=78 Identities=15% Similarity=0.151 Sum_probs=49.7
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHH-------------------HHHhccc----CCCCEEEEE
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKA-------------------TTLFGKQ----DEETLQVCK 135 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~-------------------~~~~~~~----~~~~~~~v~ 135 (214)
++..+|+|.| .||+|..+++.|+..|. +++++|.+.-.. +.+++.+ ...+++.+.
T Consensus 36 L~~~~VlivG-~GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~~ 114 (390)
T PRK07411 36 LKAASVLCIG-TGGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLYE 114 (390)
T ss_pred HhcCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEEe
Confidence 4567899999 78999999999999998 588777652111 1111111 123455555
Q ss_pred ecCCChhccchhhhCCCcEEEeccC
Q 028043 136 GDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 136 ~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
..++.. ...+ ++.+.|+||.+..
T Consensus 115 ~~~~~~-~~~~-~~~~~D~Vvd~~d 137 (390)
T PRK07411 115 TRLSSE-NALD-ILAPYDVVVDGTD 137 (390)
T ss_pred cccCHH-hHHH-HHhCCCEEEECCC
Confidence 555543 3333 4678898887764
|
|
| >cd08244 MDR_enoyl_red Possible enoyl reductase | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.02 Score=48.22 Aligned_cols=76 Identities=25% Similarity=0.271 Sum_probs=51.9
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhc---cchhhh-CCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD---LDPAIF-EGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~---v~~~~~-~~~d~li 156 (214)
.+..++|+|++|.+|..+++.+...|++|+.+++++++.+.+. .+. +.. ..|..+.+. +.+..- .++|.++
T Consensus 142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~-~~g---~~~-~~~~~~~~~~~~~~~~~~~~~~d~vl 216 (324)
T cd08244 142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVR-ALG---ADV-AVDYTRPDWPDQVREALGGGGVTVVL 216 (324)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcC---CCE-EEecCCccHHHHHHHHcCCCCceEEE
Confidence 4678999999999999999999999999999999888776653 222 111 123333222 222111 2589999
Q ss_pred eccCC
Q 028043 157 CCTGT 161 (214)
Q Consensus 157 ~~Ag~ 161 (214)
++.|.
T Consensus 217 ~~~g~ 221 (324)
T cd08244 217 DGVGG 221 (324)
T ss_pred ECCCh
Confidence 98764
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr |
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.0028 Score=61.85 Aligned_cols=127 Identities=18% Similarity=0.191 Sum_probs=78.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCe-EEEEEcChhHH--HH-HhcccCCCCE--EEEEecCCChhccchhh-----h
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRDPEKA--TT-LFGKQDEETL--QVCKGDTRNPKDLDPAI-----F 149 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~-V~~~~r~~~~~--~~-~~~~~~~~~~--~~v~~Di~d~~~v~~~~-----~ 149 (214)
..|..+|+||-||.|.++++.|.++|++ ++++.|+--+- +. ....+...++ .+-..|++..+..+..+ +
T Consensus 1767 peksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~kl 1846 (2376)
T KOG1202|consen 1767 PEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESNKL 1846 (2376)
T ss_pred ccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhhhc
Confidence 4689999999999999999999999997 66677764221 11 1222223344 33445676655554422 4
Q ss_pred CCCcEEEeccCCCCCCCCC---CCCCCchhHHHHHHHHHHHHHhc---cCCCeEEEEccccccc
Q 028043 150 EGVTHVICCTGTTAFPSRR---WDGDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~~~---~~~~~~~~~vNv~g~~~l~~a~~---~~~~~iV~vSS~~~~~ 207 (214)
+.+-.++|.|.+.....-+ ..+..+.-+.-+.||.++=+.-+ .-.+.+|..||+....
T Consensus 1847 ~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvscGR 1910 (2376)
T KOG1202|consen 1847 GPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSCGR 1910 (2376)
T ss_pred ccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeecccC
Confidence 5688899999876522211 12222222334667776655433 3456788888876543
|
|
| >TIGR00936 ahcY adenosylhomocysteinase | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.018 Score=50.96 Aligned_cols=42 Identities=24% Similarity=0.223 Sum_probs=37.0
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHH
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATT 121 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~ 121 (214)
.+.|++|+|.| .|.||+.+++.+...|++|+++++++.+..+
T Consensus 192 ~l~Gk~VvViG-~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~ 233 (406)
T TIGR00936 192 LIAGKTVVVAG-YGWCGKGIAMRARGMGARVIVTEVDPIRALE 233 (406)
T ss_pred CCCcCEEEEEC-CCHHHHHHHHHHhhCcCEEEEEeCChhhHHH
Confidence 35789999999 7889999999999999999999998876543
|
This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704). |
| >cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.029 Score=49.54 Aligned_cols=44 Identities=14% Similarity=0.162 Sum_probs=36.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC---eEEEEEcChhHHHHHhc
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI---KSRLLLRDPEKATTLFG 124 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~---~V~~~~r~~~~~~~~~~ 124 (214)
.+.+|+|.||+|+||...++.+...|. +|+++++++++++.+.+
T Consensus 175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~ 221 (410)
T cd08238 175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQR 221 (410)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHH
Confidence 467999999999999998887777654 79999999988776544
|
L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found |
| >cd08241 QOR1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.022 Score=47.37 Aligned_cols=43 Identities=26% Similarity=0.244 Sum_probs=37.9
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHh
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF 123 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~ 123 (214)
.+.+++|+|++|.+|..+++.+...|++|+.++++.++.+.+.
T Consensus 139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~ 181 (323)
T cd08241 139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALAR 181 (323)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHHH
Confidence 4689999999999999999999999999999999887766553
|
QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic |
| >TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.019 Score=47.97 Aligned_cols=75 Identities=15% Similarity=0.146 Sum_probs=48.3
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCe-EEEEEcChhHHHHHhcccCCCCEEEEEecCCCh-hccchhhh-CCCcEEEe
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP-KDLDPAIF-EGVTHVIC 157 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~-~~v~~~~~-~~~d~li~ 157 (214)
.+++|+|.|+ |+||...++.+...|++ |+++++++++.+.+.+ +. +.. ..|..+. +.+.+..- .++|++|.
T Consensus 120 ~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~a~~-~G---a~~-~i~~~~~~~~~~~~~~~~g~d~vid 193 (280)
T TIGR03366 120 KGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRRELALS-FG---ATA-LAEPEVLAERQGGLQNGRGVDVALE 193 (280)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-cC---CcE-ecCchhhHHHHHHHhCCCCCCEEEE
Confidence 5789999986 89999999988889997 8888888877655432 21 111 1122221 22222111 25899999
Q ss_pred ccCC
Q 028043 158 CTGT 161 (214)
Q Consensus 158 ~Ag~ 161 (214)
+.|.
T Consensus 194 ~~G~ 197 (280)
T TIGR03366 194 FSGA 197 (280)
T ss_pred CCCC
Confidence 8874
|
This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. |
| >PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.0086 Score=51.79 Aligned_cols=27 Identities=30% Similarity=0.448 Sum_probs=24.2
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCe
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIK 108 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~ 108 (214)
+++|.|+||||.+|+++++.|.++++.
T Consensus 4 ~~~IaIvGATG~vG~eLlrlL~~~~hP 30 (336)
T PRK05671 4 PLDIAVVGATGTVGEALVQILEERDFP 30 (336)
T ss_pred CCEEEEEccCCHHHHHHHHHHhhCCCC
Confidence 368999999999999999999987764
|
|
| >PRK13256 thiopurine S-methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.17 Score=41.37 Aligned_cols=104 Identities=12% Similarity=0.136 Sum_probs=67.4
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcc---------------cCCCCEEEEEecCCChhccch
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGK---------------QDEETLQVCKGDTRNPKDLDP 146 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~---------------~~~~~~~~v~~Di~d~~~v~~ 146 (214)
+.+|+|-|++.|. =+..|+++|++|++++-++...+...++ ..+.+++++.+|+-+...-..
T Consensus 44 ~~rvLvPgCGkg~---D~~~LA~~G~~V~GvDlS~~Ai~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~gD~f~l~~~~~ 120 (226)
T PRK13256 44 SSVCLIPMCGCSI---DMLFFLSKGVKVIGIELSEKAVLSFFSQNTINYEVIHGNDYKLYKGDDIEIYVADIFNLPKIAN 120 (226)
T ss_pred CCeEEEeCCCChH---HHHHHHhCCCcEEEEecCHHHHHHHHHHcCCCcceecccccceeccCceEEEEccCcCCCcccc
Confidence 4689999966543 3567789999999999999888775432 123468889999988653222
Q ss_pred hhhCCCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEE
Q 028043 147 AIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLV 200 (214)
Q Consensus 147 ~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~v 200 (214)
..++.|.|+=.+.....+. +.--.-...+.+.++++ ++++.+
T Consensus 121 -~~~~fD~VyDra~~~Alpp----------~~R~~Y~~~l~~lL~pg-g~llll 162 (226)
T PRK13256 121 -NLPVFDIWYDRGAYIALPN----------DLRTNYAKMMLEVCSNN-TQILLL 162 (226)
T ss_pred -ccCCcCeeeeehhHhcCCH----------HHHHHHHHHHHHHhCCC-cEEEEE
Confidence 2467899888777655332 11222344556666665 444444
|
|
| >PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ] | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.0089 Score=47.26 Aligned_cols=41 Identities=27% Similarity=0.209 Sum_probs=32.9
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhc
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFG 124 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~ 124 (214)
|+|.|.| .|++|..+|..|++.|++|++++.++++.+.+.+
T Consensus 1 M~I~ViG-lGyvGl~~A~~lA~~G~~V~g~D~~~~~v~~l~~ 41 (185)
T PF03721_consen 1 MKIAVIG-LGYVGLPLAAALAEKGHQVIGVDIDEEKVEALNN 41 (185)
T ss_dssp -EEEEE---STTHHHHHHHHHHTTSEEEEE-S-HHHHHHHHT
T ss_pred CEEEEEC-CCcchHHHHHHHHhCCCEEEEEeCChHHHHHHhh
Confidence 5788887 9999999999999999999999999998887754
|
The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D .... |
| >cd05286 QOR2 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.023 Score=47.18 Aligned_cols=43 Identities=26% Similarity=0.213 Sum_probs=38.1
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHh
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF 123 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~ 123 (214)
.+.+++|.|++|++|..+++.+...|++|+++++++++.+.+.
T Consensus 136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~ 178 (320)
T cd05286 136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELAR 178 (320)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH
Confidence 5689999999999999999999999999999999888776653
|
Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone |
| >cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.026 Score=45.83 Aligned_cols=77 Identities=17% Similarity=0.003 Sum_probs=49.2
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEE-EcCh----------hHHHHHhcccCCCCEEEE-EecCCChhccch
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLL-LRDP----------EKATTLFGKQDEETLQVC-KGDTRNPKDLDP 146 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~-~r~~----------~~~~~~~~~~~~~~~~~v-~~Di~d~~~v~~ 146 (214)
++++++|+|.| -|.+|+++++.|.+.|.+|+.+ +.+. +..+...+.. .+..+ .+|..+.+.+..
T Consensus 20 ~l~g~~vaIqG-fGnVG~~~a~~L~~~G~~vV~vsD~~g~i~~~Gld~~~l~~~~~~~~---~~~~~~~~~~~~~~~l~~ 95 (217)
T cd05211 20 SLEGLTVAVQG-LGNVGWGLAKKLAEEGGKVLAVSDPDGYIYDPGITTEELINYAVALG---GSARVKVQDYFPGEAILG 95 (217)
T ss_pred CcCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEEcCCCcEECCCCCHHHHHHHHHhhC---CccccCcccccCccccee
Confidence 45789999999 7999999999999999976665 5444 3333222211 11111 133334444432
Q ss_pred hhhCCCcEEEeccCCC
Q 028043 147 AIFEGVTHVICCTGTT 162 (214)
Q Consensus 147 ~~~~~~d~li~~Ag~~ 162 (214)
.++|++|-+|...
T Consensus 96 ---~~~DVlipaA~~~ 108 (217)
T cd05211 96 ---LDVDIFAPCALGN 108 (217)
T ss_pred ---ccccEEeeccccC
Confidence 2789999998643
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral |
| >cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.032 Score=38.23 Aligned_cols=36 Identities=31% Similarity=0.319 Sum_probs=30.8
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHC-CCeEEEEEc
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLR 114 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~-G~~V~~~~r 114 (214)
.++.+|+++|.|+ |.+|+.+++.|.+. +.+|.+.+|
T Consensus 19 ~~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r 55 (86)
T cd05191 19 KSLKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR 55 (86)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence 3457799999997 99999999999998 567888777
|
Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al |
| >PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.02 Score=48.55 Aligned_cols=78 Identities=15% Similarity=0.147 Sum_probs=54.2
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEE-cChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLL-RDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
++.||+|+|.|.++-+|+.++..|+++|+.|+++. |..+ +++..+ ...++..=+.+++.++.. +-....+|-
T Consensus 155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~-l~e~~~-----~ADIVIsavg~~~~v~~~-~lk~GavVI 227 (296)
T PRK14188 155 DLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRD-LPAVCR-----RADILVAAVGRPEMVKGD-WIKPGATVI 227 (296)
T ss_pred CCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCC-HHHHHh-----cCCEEEEecCChhhcchh-eecCCCEEE
Confidence 46899999999999999999999999999999994 6543 333322 233455556666666653 223455555
Q ss_pred ccCCCC
Q 028043 158 CTGTTA 163 (214)
Q Consensus 158 ~Ag~~~ 163 (214)
..|...
T Consensus 228 DvGin~ 233 (296)
T PRK14188 228 DVGINR 233 (296)
T ss_pred EcCCcc
Confidence 666654
|
|
| >TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.022 Score=48.30 Aligned_cols=42 Identities=21% Similarity=0.433 Sum_probs=36.1
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHC-CCeEEEEEcChhHHHHHh
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLF 123 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~ 123 (214)
+.+++|.||+|++|..+++.+... |++|+++++++++.+.+.
T Consensus 149 g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l~ 191 (336)
T TIGR02817 149 KRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWVL 191 (336)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHHH
Confidence 689999999999999998777776 999999999887766653
|
Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model. |
| >cd08301 alcohol_DH_plants Plant alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.019 Score=49.85 Aligned_cols=75 Identities=20% Similarity=0.172 Sum_probs=49.6
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCCh-----hccchhhhCCCcE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP-----KDLDPAIFEGVTH 154 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~-----~~v~~~~~~~~d~ 154 (214)
.+.+|+|.|+ |+||...++.+...|. +|+++++++++.+.+.+ +. .. .+ .|..+. +.+++..-+++|+
T Consensus 187 ~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~-~G-a~-~~--i~~~~~~~~~~~~v~~~~~~~~d~ 260 (369)
T cd08301 187 KGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKK-FG-VT-EF--VNPKDHDKPVQEVIAEMTGGGVDY 260 (369)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-cC-Cc-eE--EcccccchhHHHHHHHHhCCCCCE
Confidence 5789999985 9999999998888999 79999999888776532 22 11 11 222221 1122211136899
Q ss_pred EEeccCC
Q 028043 155 VICCTGT 161 (214)
Q Consensus 155 li~~Ag~ 161 (214)
++.+.|.
T Consensus 261 vid~~G~ 267 (369)
T cd08301 261 SFECTGN 267 (369)
T ss_pred EEECCCC
Confidence 9988763
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the |
| >PRK06719 precorrin-2 dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.034 Score=42.78 Aligned_cols=36 Identities=14% Similarity=0.159 Sum_probs=32.0
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEc
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR 114 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r 114 (214)
.+++|++|+|.| +|-+|...++.|++.|++|++++.
T Consensus 9 l~l~~~~vlVvG-GG~va~rka~~Ll~~ga~V~VIsp 44 (157)
T PRK06719 9 FNLHNKVVVIIG-GGKIAYRKASGLKDTGAFVTVVSP 44 (157)
T ss_pred EEcCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcC
Confidence 456899999999 689999999999999999998853
|
|
| >PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.042 Score=46.40 Aligned_cols=44 Identities=27% Similarity=0.273 Sum_probs=38.5
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHH
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTL 122 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~ 122 (214)
++.||+++|.|+++-+|+.++..|.++|++|+++.++...+++.
T Consensus 155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~~l~~~ 198 (286)
T PRK14175 155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSKDMASY 198 (286)
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHHHH
Confidence 56899999999999999999999999999999998876555443
|
|
| >PRK07417 arogenate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.032 Score=46.79 Aligned_cols=40 Identities=15% Similarity=0.055 Sum_probs=35.1
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHh
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF 123 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~ 123 (214)
|+|.|.| .|.||..++..|.+.|++|.+.+|+++..+...
T Consensus 1 m~I~IIG-~G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~ 40 (279)
T PRK07417 1 MKIGIVG-LGLIGGSLGLDLRSLGHTVYGVSRRESTCERAI 40 (279)
T ss_pred CeEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence 3688888 799999999999999999999999988776654
|
|
| >cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.031 Score=47.02 Aligned_cols=42 Identities=36% Similarity=0.411 Sum_probs=36.9
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHh
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF 123 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~ 123 (214)
+.+|+|.|++|.+|..+++.+...|.+|+++++++++.+.+.
T Consensus 147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~ 188 (325)
T cd05280 147 DGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYLK 188 (325)
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 358999999999999999988889999999999988776653
|
Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so |
| >COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.05 Score=44.64 Aligned_cols=108 Identities=21% Similarity=0.246 Sum_probs=63.8
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHH-------------------HHHhcccC--CCCEEEEE-e
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKA-------------------TTLFGKQD--EETLQVCK-G 136 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~-------------------~~~~~~~~--~~~~~~v~-~ 136 (214)
+++.+|+|.| -||+|++.+++|++.|. ++.+++-+.-.. +-+++.+. ++..++.. -
T Consensus 28 l~~~~V~VvG-iGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~ 106 (263)
T COG1179 28 LKQAHVCVVG-IGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIN 106 (263)
T ss_pred HhhCcEEEEe-cCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehH
Confidence 3556899999 79999999999999998 577777642111 11111111 33444332 2
Q ss_pred cCCChhccchhhhCCCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEEcccccccc
Q 028043 137 DTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 137 Di~d~~~v~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~vSS~~~~~~ 208 (214)
|.-.++.+++.+..++|.||-+.= |+..-..|+..|... ++-+|||.++.+.
T Consensus 107 ~f~t~en~~~~~~~~~DyvIDaiD------------------~v~~Kv~Li~~c~~~--ki~vIss~Gag~k 158 (263)
T COG1179 107 DFITEENLEDLLSKGFDYVIDAID------------------SVRAKVALIAYCRRN--KIPVISSMGAGGK 158 (263)
T ss_pred hhhCHhHHHHHhcCCCCEEEEchh------------------hhHHHHHHHHHHHHc--CCCEEeeccccCC
Confidence 445666777654557888875431 233334566666443 2345677776654
|
|
| >cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1 | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.034 Score=47.17 Aligned_cols=74 Identities=22% Similarity=0.248 Sum_probs=48.1
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChh---ccchhhh-CCCcEEEec
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK---DLDPAIF-EGVTHVICC 158 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~---~v~~~~~-~~~d~li~~ 158 (214)
..++++||+|++|..+++.....|.+|+++++++++.+.+.+ +. .. .+ .|..+.+ .+.+..- .++|+++++
T Consensus 145 ~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~-~g-~~-~~--i~~~~~~~~~~v~~~~~~~~~d~vid~ 219 (324)
T cd08291 145 KAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKK-IG-AE-YV--LNSSDPDFLEDLKELIAKLNATIFFDA 219 (324)
T ss_pred cEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cC-Cc-EE--EECCCccHHHHHHHHhCCCCCcEEEEC
Confidence 445555999999999998888899999999999888776543 21 11 12 2222222 2222111 268999998
Q ss_pred cCC
Q 028043 159 TGT 161 (214)
Q Consensus 159 Ag~ 161 (214)
.|.
T Consensus 220 ~g~ 222 (324)
T cd08291 220 VGG 222 (324)
T ss_pred CCc
Confidence 773
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin |
| >PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.038 Score=49.94 Aligned_cols=76 Identities=18% Similarity=0.174 Sum_probs=52.7
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
..+.+|+|+|.| .|+.|+++++.|++.|++|.+.+++.....++.+ ..++.+..++- +.+ .+.++|.||.
T Consensus 11 ~~~~~~~v~v~G-~G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~l~---~~gi~~~~~~~-~~~-----~~~~~d~vV~ 80 (473)
T PRK00141 11 PQELSGRVLVAG-AGVSGRGIAAMLSELGCDVVVADDNETARHKLIE---VTGVADISTAE-ASD-----QLDSFSLVVT 80 (473)
T ss_pred ccccCCeEEEEc-cCHHHHHHHHHHHHCCCEEEEECCChHHHHHHHH---hcCcEEEeCCC-chh-----HhcCCCEEEe
Confidence 345678899999 8899999999999999999999987655433222 22444443211 111 1346799999
Q ss_pred ccCCCC
Q 028043 158 CTGTTA 163 (214)
Q Consensus 158 ~Ag~~~ 163 (214)
..|+..
T Consensus 81 Spgi~~ 86 (473)
T PRK00141 81 SPGWRP 86 (473)
T ss_pred CCCCCC
Confidence 999864
|
|
| >PLN02306 hydroxypyruvate reductase | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.033 Score=49.08 Aligned_cols=39 Identities=13% Similarity=0.083 Sum_probs=34.3
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHH-HCCCeEEEEEcChh
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLL-SRNIKSRLLLRDPE 117 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~-~~G~~V~~~~r~~~ 117 (214)
..+.||++.|.| .|.||+++++.|. ..|.+|+..++...
T Consensus 161 ~~L~gktvGIiG-~G~IG~~vA~~l~~~fGm~V~~~d~~~~ 200 (386)
T PLN02306 161 NLLKGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQS 200 (386)
T ss_pred cCCCCCEEEEEC-CCHHHHHHHHHHHhcCCCEEEEECCCCc
Confidence 357899999999 8999999999986 78999999998653
|
|
| >cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.026 Score=48.91 Aligned_cols=75 Identities=16% Similarity=0.086 Sum_probs=49.4
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCC-----hhccchhhhCCCcE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN-----PKDLDPAIFEGVTH 154 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d-----~~~v~~~~~~~~d~ 154 (214)
.+.+|+|.| +|++|...++.+...|. +|+++++++++.+.+.+ +. +. ...|..+ .+.+.+..-+++|+
T Consensus 184 ~g~~vlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~-~g---a~-~~i~~~~~~~~~~~~~~~~~~~g~d~ 257 (365)
T cd08277 184 PGSTVAVFG-LGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKE-FG---AT-DFINPKDSDKPVSEVIREMTGGGVDY 257 (365)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH-cC---CC-cEeccccccchHHHHHHHHhCCCCCE
Confidence 578999997 59999999998888999 69999998888765532 22 11 1122222 12233211236899
Q ss_pred EEeccCC
Q 028043 155 VICCTGT 161 (214)
Q Consensus 155 li~~Ag~ 161 (214)
+|.+.|.
T Consensus 258 vid~~g~ 264 (365)
T cd08277 258 SFECTGN 264 (365)
T ss_pred EEECCCC
Confidence 9998773
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i |
| >TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.03 Score=48.36 Aligned_cols=75 Identities=19% Similarity=0.104 Sum_probs=50.1
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCe-EEEEEcChhHHHHHhcccCCCCEEEEEecCCChh---ccchhhh-CCCcEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK---DLDPAIF-EGVTHV 155 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~---~v~~~~~-~~~d~l 155 (214)
.+++|+|.|+ |++|...++.+...|++ |+++++++++.+.+.+ +. +. ...|..+.+ .+.+..- .++|++
T Consensus 176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~-~G---a~-~~i~~~~~~~~~~i~~~~~~~g~d~v 249 (358)
T TIGR03451 176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWARE-FG---AT-HTVNSSGTDPVEAIRALTGGFGADVV 249 (358)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-cC---Cc-eEEcCCCcCHHHHHHHHhCCCCCCEE
Confidence 4789999985 99999999988889995 9889998888766542 22 11 112333322 2222111 258999
Q ss_pred EeccCC
Q 028043 156 ICCTGT 161 (214)
Q Consensus 156 i~~Ag~ 161 (214)
|.+.|.
T Consensus 250 id~~g~ 255 (358)
T TIGR03451 250 IDAVGR 255 (358)
T ss_pred EECCCC
Confidence 998884
|
Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione. |
| >PRK00048 dihydrodipicolinate reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.014 Score=48.44 Aligned_cols=36 Identities=22% Similarity=0.305 Sum_probs=28.8
Q ss_pred CEEEEEcCchHHHHHHHHHHHH-CCCeEEE-EEcChhH
Q 028043 83 KLVLVAGGSGGVGQLVVASLLS-RNIKSRL-LLRDPEK 118 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~-~G~~V~~-~~r~~~~ 118 (214)
++|.|+|++|.+|+.+++.+.+ .+.+++. +++++++
T Consensus 2 mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~ 39 (257)
T PRK00048 2 IKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSP 39 (257)
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcc
Confidence 5899999999999999999886 4788666 5565544
|
|
| >TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.27 Score=39.72 Aligned_cols=76 Identities=13% Similarity=0.012 Sum_probs=51.7
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhccc---------------CCCCEEEEEecCCChhccch
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ---------------DEETLQVCKGDTRNPKDLDP 146 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~---------------~~~~~~~v~~Di~d~~~v~~ 146 (214)
+.+||+-|++.| + =+..|+++|++|++++.++..++.+.++. ...+++++.+|+.+.+.-
T Consensus 35 ~~rvLd~GCG~G--~-da~~LA~~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~-- 109 (213)
T TIGR03840 35 GARVFVPLCGKS--L-DLAWLAEQGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTAA-- 109 (213)
T ss_pred CCeEEEeCCCch--h-HHHHHHhCCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCcc--
Confidence 468999995544 3 45667889999999999998877642211 134577888999876431
Q ss_pred hhhCCCcEEEeccCCCC
Q 028043 147 AIFEGVTHVICCTGTTA 163 (214)
Q Consensus 147 ~~~~~~d~li~~Ag~~~ 163 (214)
..+..|.++-.+...+
T Consensus 110 -~~~~fD~i~D~~~~~~ 125 (213)
T TIGR03840 110 -DLGPVDAVYDRAALIA 125 (213)
T ss_pred -cCCCcCEEEechhhcc
Confidence 1245788887765544
|
Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity. |
| >PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF) | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.034 Score=42.94 Aligned_cols=79 Identities=15% Similarity=0.172 Sum_probs=47.4
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
++.||+++|.|.+.-+|+-++..|.++|+.|.++..+...+++..+ . ..++..-+..+..++...+ +.+.+|-.
T Consensus 33 ~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~~~~---~--ADIVVsa~G~~~~i~~~~i-k~gavVID 106 (160)
T PF02882_consen 33 DLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQEITR---R--ADIVVSAVGKPNLIKADWI-KPGAVVID 106 (160)
T ss_dssp STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHHHHT---T--SSEEEE-SSSTT-B-GGGS--TTEEEEE
T ss_pred CCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccceee---e--ccEEeeeeccccccccccc-cCCcEEEe
Confidence 4689999999999999999999999999999998777655555432 2 2233344445555554222 34566666
Q ss_pred cCCCC
Q 028043 159 TGTTA 163 (214)
Q Consensus 159 Ag~~~ 163 (214)
.|...
T Consensus 107 vG~~~ 111 (160)
T PF02882_consen 107 VGINY 111 (160)
T ss_dssp --CEE
T ss_pred cCCcc
Confidence 66543
|
Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A .... |
| >PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.014 Score=39.13 Aligned_cols=32 Identities=28% Similarity=0.325 Sum_probs=22.2
Q ss_pred CEEEEEcCchHHHHH--HHHHHHHCCCeEEEEEcC
Q 028043 83 KLVLVAGGSGGVGQL--VVASLLSRNIKSRLLLRD 115 (214)
Q Consensus 83 k~vlITGasggIG~~--la~~L~~~G~~V~~~~r~ 115 (214)
|+|||+|+|+|.|.+ ++..+ ..|++.+.+...
T Consensus 40 K~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~fE 73 (78)
T PF12242_consen 40 KKVLVIGASTGYGLASRIAAAF-GAGADTIGVSFE 73 (78)
T ss_dssp SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE--
T ss_pred ceEEEEecCCcccHHHHHHHHh-cCCCCEEEEeec
Confidence 899999999999998 55555 678888877653
|
|
| >PLN02514 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.046 Score=47.34 Aligned_cols=75 Identities=12% Similarity=0.085 Sum_probs=50.8
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
.+.+++|.| +|++|...++.+...|++|+++++++++.+...+.+. +.. ..|-.+.+.+.+ ...++|+++.+.|
T Consensus 180 ~g~~vlV~G-~G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~G---a~~-~i~~~~~~~~~~-~~~~~D~vid~~g 253 (357)
T PLN02514 180 SGLRGGILG-LGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLG---ADD-YLVSSDAAEMQE-AADSLDYIIDTVP 253 (357)
T ss_pred CCCeEEEEc-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcC---CcE-EecCCChHHHHH-hcCCCcEEEECCC
Confidence 467899996 5999999999888899999999888877655543332 111 122233333433 2346899999887
Q ss_pred C
Q 028043 161 T 161 (214)
Q Consensus 161 ~ 161 (214)
.
T Consensus 254 ~ 254 (357)
T PLN02514 254 V 254 (357)
T ss_pred c
Confidence 3
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 2e-30
Identities = 29/146 (19%), Positives = 58/146 (39%), Gaps = 13/146 (8%)
Query: 70 PNSDSKVTPASSSKL-VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDE 128
+ S + VLV G +G V + +++ L ++ + ++R+ E+ L +
Sbjct: 8 HHHSSGRENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGAS 67
Query: 129 ETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLV- 187
+ + + +D A F + V+ G S G + +D G +
Sbjct: 68 D---IVVANL--EEDFSHA-FASIDAVVFAAG-----SGPHTGADKTILIDLWGAIKTIQ 116
Query: 188 SALPSSLKRIVLVSSVGVTKFNELPW 213
A +KR ++VSSVG ++ P
Sbjct: 117 EAEKRGIKRFIMVSSVGTVDPDQGPM 142
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253 | Back alignment and structure |
|---|
Score = 109 bits (273), Expect = 2e-29
Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 21/146 (14%)
Query: 79 ASSSKLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQDEETLQVCKG 136
+++ VLV G SG GQ+V L + ++ L+R + + G+ V G
Sbjct: 1 SANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGE-----ADVFIG 55
Query: 137 DTRNPKDLDPAIFEGVTHVICCTGTTA------------FPSRRWDGDNTPEKVDWEGVR 184
D + ++PA F+G+ ++ T P ++ PE+VDW G +
Sbjct: 56 DITDADSINPA-FQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQK 114
Query: 185 NLVSALPSS-LKRIVLVSSVGVTKFN 209
N + A + +K IV+V S+G T +
Sbjct: 115 NQIDAAKVAGVKHIVVVGSMGGTNPD 140
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 7e-29
Identities = 28/123 (22%), Positives = 49/123 (39%), Gaps = 14/123 (11%)
Query: 85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
+ + G +G G +A + + +L+RD + + V GD D+
Sbjct: 6 IAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG----PRPAHVVVGDVLQAADV 61
Query: 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSS-LKRIVLVSSV 203
D G VI GT D +P V EG RN+V+A+ + + ++V +S
Sbjct: 62 DKT-VAGQDAVIVLLGT--------RNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSA 112
Query: 204 GVT 206
+
Sbjct: 113 FLL 115
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219 | Back alignment and structure |
|---|
Score = 98.5 bits (246), Expect = 8e-26
Identities = 23/124 (18%), Positives = 50/124 (40%), Gaps = 18/124 (14%)
Query: 85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGD-TRNPKD 143
+ + G +G VG+ ++ SL + + + R E+ ++ D P++
Sbjct: 3 IFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQYNN------VKAVHFDVDWTPEE 56
Query: 144 LDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSS-LKRIVLVSS 202
+ G+ +I +G+ + KVD G L+ A + +KR +L+S+
Sbjct: 57 MAKQ-LHGMDAIINVSGSGG---------KSLLKVDLYGAVKLMQAAEKAEVKRFILLST 106
Query: 203 VGVT 206
+
Sbjct: 107 IFSL 110
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236 | Back alignment and structure |
|---|
Score = 82.2 bits (203), Expect = 2e-19
Identities = 27/123 (21%), Positives = 44/123 (35%), Gaps = 20/123 (16%)
Query: 85 VLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD 143
VL+ G G + + V+ L + IK L R P K + Q+ GD N
Sbjct: 26 VLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTN----SQIIMGDVLNHAA 81
Query: 144 LDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSV 203
L A +G V E +D + + + +KR++ V S+
Sbjct: 82 LKQA-MQGQDIVYANLT--------------GEDLDIQANSVIAAMKACDVKRLIFVLSL 126
Query: 204 GVT 206
G+
Sbjct: 127 GIY 129
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227 | Back alignment and structure |
|---|
Score = 78.6 bits (194), Expect = 3e-18
Identities = 24/132 (18%), Positives = 48/132 (36%), Gaps = 14/132 (10%)
Query: 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTR 139
K +++ G SG VG ++ L+R + ++R PEK K + E L+V K D
Sbjct: 2 EKVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKI-----KIENEHLKVKKADVS 56
Query: 140 NPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSS-LKRIV 198
+ ++ +G VI + + ++ + + + R +
Sbjct: 57 SLDEVCEVC-KGADAVISAFNPGW-------NNPDIYDETIKVYLTIIDGVKKAGVNRFL 108
Query: 199 LVSSVGVTKFNE 210
+V G
Sbjct: 109 MVGGAGSLFIAP 120
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342 | Back alignment and structure |
|---|
Score = 70.4 bits (173), Expect = 1e-14
Identities = 22/122 (18%), Positives = 39/122 (31%), Gaps = 9/122 (7%)
Query: 85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
V G +G +G ++ + L+ R + L + E + + L
Sbjct: 16 YAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPE----CRVAEMLDHAGL 71
Query: 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLV-SALPSSLKRIVLVSSV 203
+ A G+ VI G RRW + + L + + RI+ V S
Sbjct: 72 ERA-LRGLDGVIFSAGYYPSRPRRWQEE---VASALGQTNPFYAACLQARVPRILYVGSA 127
Query: 204 GV 205
Sbjct: 128 YA 129
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221 | Back alignment and structure |
|---|
Score = 68.1 bits (166), Expect = 2e-14
Identities = 26/132 (19%), Positives = 50/132 (37%), Gaps = 23/132 (17%)
Query: 85 VLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD 143
+ + G +G + Q + A+LL+ ++ L R + D E + V +G +NP
Sbjct: 8 ITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEII-DHERVTVIEGSFQNPGX 66
Query: 144 LDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSS 202
L+ A V + + ++V AL +++R++ VS
Sbjct: 67 LEQA-VTNAEVVFVGAMESG-----------------SDMASIVKALSRXNIRRVIGVSM 108
Query: 203 VGVTKFNELPWR 214
G+ E P
Sbjct: 109 AGL--SGEFPVA 118
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242 | Back alignment and structure |
|---|
Score = 66.0 bits (161), Expect = 2e-13
Identities = 33/136 (24%), Positives = 51/136 (37%), Gaps = 12/136 (8%)
Query: 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLL--RDPEKATTLFGKQDEETLQVCKGDT 138
+K V + G SG G++++ +L + + S++ L R K + D
Sbjct: 17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKN----VNQEVVDF 72
Query: 139 RNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLV-SALPSSLKRI 197
D A F+G CC GTT R G +VD + V A K
Sbjct: 73 EKLDDYASA-FQGHDVGFCCLGTT----RGKAGAEGFVRVDRDYVLKSAELAKAGGCKHF 127
Query: 198 VLVSSVGVTKFNELPW 213
L+SS G K + +
Sbjct: 128 NLLSSKGADKSSNFLY 143
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215 | Back alignment and structure |
|---|
Score = 63.9 bits (156), Expect = 7e-13
Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 13/126 (10%)
Query: 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTR 139
S+ K VL+AG +G G+ ++ +LS +++ ++
Sbjct: 3 STPKRVLLAGATGLTGEHLLDRILSEPTLAKV---------IAPARKALAEHPRLDNPVG 53
Query: 140 NPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVS-ALPSSLKRIV 198
+L P + + CC GTT + + VD++ + AL + +
Sbjct: 54 PLAELLPQLDGSIDTAFCCLGTTI---KEAGSEEAFRAVDFDLPLAVGKRALEMGARHYL 110
Query: 199 LVSSVG 204
+VS++G
Sbjct: 111 VVSALG 116
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221 | Back alignment and structure |
|---|
Score = 61.5 bits (149), Expect = 6e-12
Identities = 16/122 (13%), Positives = 42/122 (34%), Gaps = 19/122 (15%)
Query: 85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
+ + G +G G ++ +R + ++R+ K T + + + + D +
Sbjct: 3 IGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQT-----HKDINILQKDIFDLTLS 57
Query: 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSV 203
D + V+ G + + + +L+S L + R+++V
Sbjct: 58 DLS---DQNVVVDAYGISP----------DEAEKHVTSLDHLISVLNGTVSPRLLVVGGA 104
Query: 204 GV 205
Sbjct: 105 AS 106
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224 | Back alignment and structure |
|---|
Score = 60.8 bits (147), Expect = 1e-11
Identities = 25/122 (20%), Positives = 42/122 (34%), Gaps = 16/122 (13%)
Query: 85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
+ V G +G G +VA R + ++RDP+KA G + P L
Sbjct: 3 IAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLG-------ATVATLVKEPLVL 55
Query: 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-PSSLKRIVLVSSV 203
A + V V+ R + + +LVS L S + ++ S
Sbjct: 56 TEADLDSVDAVVDALSVPWGSGR--------GYLHLDFATHLVSLLRNSDTLAVFILGSA 107
Query: 204 GV 205
+
Sbjct: 108 SL 109
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289 | Back alignment and structure |
|---|
Score = 60.0 bits (146), Expect = 3e-11
Identities = 23/131 (17%), Positives = 47/131 (35%), Gaps = 18/131 (13%)
Query: 85 VLVAGGSGGVGQLVVASLLSRNIKS-RLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD 143
+++ G +G +G + ++ +I + +R+ EK + + V + D N +
Sbjct: 3 IMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRG----KVSVRQLDYFNQES 58
Query: 144 LDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSS-LKRIVLVSS 202
+ A F+G+ V+ +R V NLV A S + I+ +
Sbjct: 59 MVEA-FKGMDTVVFIPSIIHPSFKR-----------IPEVENLVYAAKQSGVAHIIFIGY 106
Query: 203 VGVTKFNELPW 213
N
Sbjct: 107 YADQHNNPFHM 117
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308 | Back alignment and structure |
|---|
Score = 57.6 bits (139), Expect = 3e-10
Identities = 20/92 (21%), Positives = 37/92 (40%), Gaps = 6/92 (6%)
Query: 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQ-----VC 134
S +L+ G +G +G+ V + L + LL+R+ ++ Q E+ + +
Sbjct: 2 GSRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIV 61
Query: 135 KGDTRNPKDLDPAIFEGVTHVICCTGTTAFPS 166
G + L A + V VI G+ S
Sbjct: 62 HGSIDDHASLVEA-VKNVDVVISTVGSLQIES 92
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 5e-10
Identities = 31/139 (22%), Positives = 49/139 (35%), Gaps = 18/139 (12%)
Query: 80 SSSKLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPE--KATTLFGKQDEETLQVCKG 136
KLV+V GG+G G V +LL K R++ R+P A L + E V +G
Sbjct: 3 VDKKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAE----VVQG 58
Query: 137 DTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLV-SALPSSLK 195
D + ++ A G T W+ + ++V + L A L
Sbjct: 59 DQDDQVIMELA-LNGAYATFIVTNY-------WESCSQEQEVKQ--GKLLADLARRLGLH 108
Query: 196 RIVLVSSVGVTKFNELPWR 214
+V + K
Sbjct: 109 YVVYSGLENIKKLTAGRLA 127
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 7e-10
Identities = 34/143 (23%), Positives = 55/143 (38%), Gaps = 12/143 (8%)
Query: 77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKAT---TLFGKQDEETLQV 133
K V GG+G V L+V LL + +RDP+ L Q+ L++
Sbjct: 4 QHPIGKKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKI 63
Query: 134 CKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVD--WEGVRN-LVSAL 190
+ D + + I G V A P D + + +GV N + +
Sbjct: 64 FRADLTDELSFEAPI-AGCDFVFH----VATPVHFASEDPENDMIKPAIQGVVNVMKACT 118
Query: 191 PS-SLKRIVLVSSVGVTKFNELP 212
+ S+KR++L SS N+L
Sbjct: 119 RAKSVKRVILTSSAAAVTINQLD 141
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352 | Back alignment and structure |
|---|
Score = 56.4 bits (136), Expect = 8e-10
Identities = 16/83 (19%), Positives = 27/83 (32%), Gaps = 5/83 (6%)
Query: 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK--ATTLFGKQDEETLQVCKG 136
A K + V G +G G ++ + R + + A L + + +G
Sbjct: 2 AQQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVT---LFQG 58
Query: 137 DTRNPKDLDPAIFEGVTHVICCT 159
N L +FEG T
Sbjct: 59 PLLNNVPLMDTLFEGAHLAFINT 81
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287 | Back alignment and structure |
|---|
Score = 55.7 bits (135), Expect = 1e-09
Identities = 30/124 (24%), Positives = 52/124 (41%), Gaps = 19/124 (15%)
Query: 85 VLVAGGSGGVGQLVVASLLSRNIKS--RLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK 142
+ V G +G +G LV+ LL + S ++R+ EKA+TL ++ ++V GD P+
Sbjct: 3 IAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA----DQGVEVRHGDYNQPE 58
Query: 143 DLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSS-LKRIVLVS 201
L A F GV+ ++ +G + N+V A + +K I
Sbjct: 59 SLQKA-FAGVSKLLFISGPHYDNTLL-----------IVQHANVVKAARDAGVKHIAYTG 106
Query: 202 SVGV 205
Sbjct: 107 YAFA 110
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337 | Back alignment and structure |
|---|
Score = 55.7 bits (135), Expect = 1e-09
Identities = 39/136 (28%), Positives = 54/136 (39%), Gaps = 17/136 (12%)
Query: 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA------TTLFGKQDEETLQ 132
S S+ V V G SG +G +V LL R R +RDP L E L
Sbjct: 2 GSQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPK--AETHLT 59
Query: 133 VCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVD--WEGVRN-LVSA 189
+ K D + D AI +G T V A P D E + EG+ + S
Sbjct: 60 LWKADLADEGSFDEAI-KGCTGVFH----VATPMDFESKDPENEVIKPTIEGMLGIMKSC 114
Query: 190 LPS-SLKRIVLVSSVG 204
+ +++R+V SS G
Sbjct: 115 AAAKTVRRLVFTSSAG 130
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307 | Back alignment and structure |
|---|
Score = 54.5 bits (131), Expect = 4e-09
Identities = 18/92 (19%), Positives = 37/92 (40%), Gaps = 7/92 (7%)
Query: 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD------EETLQVC 134
+ +L+ G +G +G+ +V + + + L+R A K++ + +
Sbjct: 1 TENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILL 60
Query: 135 KGDTRNPKDLDPAIFEGVTHVICCTGTTAFPS 166
+GD + + L A + V VIC G
Sbjct: 61 EGDINDHETLVKA-IKQVDIVICAAGRLLIED 91
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313 | Back alignment and structure |
|---|
Score = 53.8 bits (129), Expect = 5e-09
Identities = 15/92 (16%), Positives = 32/92 (34%), Gaps = 5/92 (5%)
Query: 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETL----QVCK 135
VL+ GG+G +G+ +V + +S + +L R + + ++ +
Sbjct: 2 DKKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIE 61
Query: 136 GDTRNPKDLDPAIFEGVTHVICCTGTTAFPSR 167
+ + L A + V VI
Sbjct: 62 ASLDDHQRLVDA-LKQVDVVISALAGGVLSHH 92
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318 | Back alignment and structure |
|---|
Score = 53.4 bits (128), Expect = 8e-09
Identities = 19/96 (19%), Positives = 32/96 (33%), Gaps = 2/96 (2%)
Query: 71 NSDSKVTPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEET 130
+ SK +L+ GG+G +G +V L + + R TTL +
Sbjct: 1 SGHGMEENGMKSK-ILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLG 59
Query: 131 LQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPS 166
+ KG+ + L + V VI
Sbjct: 60 AIIVKGELDEHEKLVEL-MKKVDVVISALAFPQILD 94
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 1e-08
Identities = 26/124 (20%), Positives = 52/124 (41%), Gaps = 21/124 (16%)
Query: 85 VLVAGGSGGVGQLVVASLLSRNIKS--RLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK 142
+ + G +G +G V+ SL+ S ++R+P KA L + + V + D +
Sbjct: 2 IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA----AQGITVRQADYGDEA 57
Query: 143 DLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSS-LKRIVLVS 201
L A +GV ++ + + G P+ RN+++A ++ +K I S
Sbjct: 58 ALTSA-LQGVEKLLLISSSE-------VGQRAPQ------HRNVINAAKAAGVKFIAYTS 103
Query: 202 SVGV 205
+
Sbjct: 104 LLHA 107
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321 | Back alignment and structure |
|---|
Score = 51.9 bits (124), Expect = 3e-08
Identities = 17/93 (18%), Positives = 37/93 (39%), Gaps = 6/93 (6%)
Query: 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQ-----V 133
S + +++ GG+G +G+ +V + LS + + + R +T Q E + +
Sbjct: 1 GSHMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTI 60
Query: 134 CKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPS 166
+G+ + + + V VI S
Sbjct: 61 IEGEMEEHEKMVSV-LKQVDIVISALPFPMISS 92
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 1e-07
Identities = 34/134 (25%), Positives = 43/134 (32%), Gaps = 17/134 (12%)
Query: 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA---TTLFGKQDEETLQ-VCK 135
LVLV G +G V VV LL K R R K + + +
Sbjct: 9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVV 68
Query: 136 GDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDW---EGVRN-LVSAL- 190
D D I +G V A N ++V G N L +A
Sbjct: 69 EDMLKQGAYDEVI-KGAAGVAH----IASV---VSFSNKYDEVVTPAIGGTLNALRAAAA 120
Query: 191 PSSLKRIVLVSSVG 204
S+KR VL SS
Sbjct: 121 TPSVKRFVLTSSTV 134
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322 | Back alignment and structure |
|---|
Score = 49.5 bits (119), Expect = 2e-07
Identities = 30/131 (22%), Positives = 43/131 (32%), Gaps = 14/131 (10%)
Query: 83 KLVLVAGGSGGVGQLVVASLLSRNIK----SRLLLRDPEKATTLFG-KQDEETLQVCKGD 137
V V GG+G +G ++ SLL R + L E L D
Sbjct: 2 GRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNAD 61
Query: 138 TRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVD--WEGVRN-LVSALPS-S 193
NP AI EG + TA P + +G L + + S +
Sbjct: 62 LSNPDSFAAAI-EGCVGIFH----TASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKT 116
Query: 194 LKRIVLVSSVG 204
+KR + SS
Sbjct: 117 VKRFIYTSSGS 127
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346 | Back alignment and structure |
|---|
Score = 49.3 bits (117), Expect = 2e-07
Identities = 18/96 (18%), Positives = 38/96 (39%), Gaps = 5/96 (5%)
Query: 76 VTPASSSK-LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDE---ETL 131
V+P S K VL+AG +G +GQ V + L + + +L R ++ + +
Sbjct: 3 VSPVPSPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGA 62
Query: 132 QVCKGDTRNPKDLDPAI-FEGVTHVICCTGTTAFPS 166
+ G + ++ + + V+ G +
Sbjct: 63 IIVYGLINEQEAMEKILKEHEIDIVVSTVGGESILD 98
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286 | Back alignment and structure |
|---|
Score = 48.2 bits (115), Expect = 4e-07
Identities = 26/122 (21%), Positives = 47/122 (38%), Gaps = 16/122 (13%)
Query: 85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
+L+AG G +G + L ++ + L R + +Q D P L
Sbjct: 6 ILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM--------PAGVQTLIADVTRPDTL 56
Query: 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSS-LKRIVLVSSV 203
+ ++ C + + ++ EG+RN +SAL + L+ + VSS
Sbjct: 57 ASIVHLRPEILVYC-----VAASEYSDEH-YRLSYVEGLRNTLSALEGAPLQHVFFVSST 110
Query: 204 GV 205
GV
Sbjct: 111 GV 112
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} Length = 516 | Back alignment and structure |
|---|
Score = 45.1 bits (107), Expect = 6e-06
Identities = 20/127 (15%), Positives = 40/127 (31%), Gaps = 27/127 (21%)
Query: 85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
V + G G VG+ + A L + + L+R K F +P +
Sbjct: 150 VAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGKRFW---------------DPLNP 194
Query: 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVD------WEGVRNLVSALPSSLKRIV 198
+ +G ++ G F R+ + + L + S +
Sbjct: 195 ASDLLDGADVLVHLAGEPIF--GRF----NDSHKEAIRESRVLPTKFLAELVAESTQCTT 248
Query: 199 LVSSVGV 205
++S+ V
Sbjct: 249 MISASAV 255
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364 | Back alignment and structure |
|---|
Score = 44.0 bits (103), Expect = 1e-05
Identities = 24/134 (17%), Positives = 44/134 (32%), Gaps = 21/134 (15%)
Query: 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRL-----LLRDPEKATTLFGKQDEETLQVCKG 136
S + L+ G +G +G + L + + R A ++ + +
Sbjct: 1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-----HEDNPINYVQC 55
Query: 137 DTRNPKDLDPAI--FEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL---P 191
D +P D + VTHV T + N+ RN++ A+
Sbjct: 56 DISDPDDSQAKLSPLTDVTHVFYVTWANRSTEQENCEANSK------MFRNVLDAVIPNC 109
Query: 192 SSLKRIVLVSSVGV 205
+LK I L +
Sbjct: 110 PNLKHISLQTGRKH 123
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 1e-04
Identities = 26/128 (20%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD 143
++LV G SG +G +V L + K ++ D ++D ++ D N +
Sbjct: 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASD-------IVQRDTGGIKFITLDVSNRDE 53
Query: 144 LDPAI-FEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWE----GVRN-LVSALPSSLKRI 197
+D A+ + + S + G+ P ++ G N L +A ++++
Sbjct: 54 IDRAVEKYSIDAIFHL---AGILSAK--GEKDPAL-AYKVNMNGTYNILEAAKQHRVEKV 107
Query: 198 VLVSSVGV 205
V+ S++GV
Sbjct: 108 VIPSTIGV 115
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 214 | |||
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 99.92 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 99.9 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.9 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.89 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 99.89 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 99.89 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.88 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 99.88 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 99.88 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 99.88 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 99.88 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 99.88 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 99.88 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 99.88 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 99.88 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 99.88 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.88 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 99.88 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 99.88 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 99.88 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.88 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 99.87 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 99.87 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.87 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.87 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 99.87 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 99.87 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 99.87 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.87 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 99.87 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 99.87 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 99.87 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 99.87 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 99.87 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 99.87 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.87 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.87 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 99.87 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 99.87 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 99.87 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 99.87 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 99.87 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 99.87 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 99.87 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 99.87 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 99.87 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 99.87 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 99.87 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.87 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 99.87 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 99.87 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 99.87 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.87 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 99.87 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.87 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 99.87 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 99.87 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 99.87 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.87 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 99.86 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.86 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.86 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.86 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 99.86 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 99.86 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.86 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 99.86 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 99.86 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 99.86 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 99.86 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 99.86 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 99.86 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 99.86 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 99.86 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 99.86 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.86 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.86 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 99.86 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 99.86 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 99.86 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 99.86 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 99.86 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 99.86 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 99.86 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.86 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 99.86 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.86 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 99.86 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 99.86 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 99.86 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 99.86 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.86 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 99.86 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 99.86 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 99.86 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 99.86 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 99.86 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 99.86 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 99.86 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 99.86 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 99.85 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.85 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.85 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 99.85 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.85 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.85 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.85 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 99.85 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 99.85 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 99.85 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.85 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 99.85 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 99.85 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 99.85 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.85 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.85 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 99.85 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 99.85 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 99.85 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 99.85 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 99.85 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.85 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.85 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 99.85 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.85 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.85 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.85 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.85 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.85 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.85 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.85 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 99.85 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 99.85 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.85 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 99.85 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.85 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 99.85 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.85 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 99.85 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.85 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 99.85 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 99.84 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 99.84 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 99.84 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.84 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 99.84 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 99.84 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 99.84 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 99.84 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.84 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 99.84 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 99.84 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 99.84 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 99.84 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 99.84 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 99.84 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 99.84 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.84 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.84 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 99.84 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 99.84 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.84 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 99.84 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 99.84 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 99.84 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 99.84 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.83 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 99.83 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 99.83 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 99.83 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 99.83 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 99.83 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 99.83 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 99.83 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 99.83 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.83 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.83 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 99.83 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 99.83 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.83 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.83 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 99.83 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 99.83 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 99.83 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.83 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 99.83 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.83 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 99.83 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 99.82 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 99.82 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.82 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.82 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.82 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 99.82 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 99.82 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 99.82 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.82 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.82 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 99.82 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.82 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 99.82 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 99.82 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 99.82 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.82 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 99.82 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 99.82 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 99.82 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 99.82 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.81 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 99.81 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 99.81 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 99.81 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.81 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 99.81 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 99.81 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.81 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 99.81 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.81 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 99.8 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 99.8 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.8 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 99.8 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.8 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.8 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 99.8 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 99.8 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.8 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 99.8 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 99.8 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.8 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 99.8 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 99.8 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 99.8 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.79 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.79 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.79 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 99.79 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.79 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 99.79 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 99.79 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 99.79 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 99.79 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 99.79 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 99.79 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 99.79 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.79 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 99.79 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.79 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.78 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.78 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 99.78 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.78 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.78 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.77 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 99.77 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.76 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.76 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.76 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.76 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.76 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 99.76 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 99.76 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.76 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.76 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 99.75 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 99.75 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 99.75 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.75 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.74 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 99.74 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 99.74 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 99.73 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.73 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 99.73 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 99.73 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 99.73 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.72 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 99.72 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.72 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.72 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 99.72 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 99.72 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.72 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 99.71 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.71 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.71 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.71 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 99.71 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 99.7 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 99.7 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.69 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 99.69 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.68 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.68 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 99.67 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 99.66 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.66 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 99.66 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 99.65 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 99.64 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 99.64 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 99.63 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 99.63 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.61 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.61 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.61 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 99.59 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.59 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 99.58 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.58 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.58 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.56 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 99.53 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 99.51 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 99.43 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 99.37 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 99.36 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 99.09 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 99.07 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 99.01 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 99.0 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 98.99 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 98.97 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 98.96 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 98.94 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 98.93 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 98.88 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 98.88 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 98.8 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 98.77 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 98.75 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 98.74 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 98.7 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 98.67 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 98.63 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 98.57 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 98.56 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 98.55 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 98.55 | |
| 1nvt_A | 287 | Shikimate 5'-dehydrogenase; structural genomics, P | 98.54 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 98.54 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 98.53 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 98.5 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 98.5 | |
| 2o7s_A | 523 | DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat | 98.48 | |
| 5mdh_A | 333 | Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH | 98.45 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 98.45 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 98.44 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 98.43 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 98.42 | |
| 1p77_A | 272 | Shikimate 5-dehydrogenase; NADPH, oxidoreductase; | 98.41 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 98.39 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 98.38 | |
| 1mld_A | 314 | Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D | 98.36 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 98.27 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 98.25 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 98.24 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 98.23 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 98.23 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 98.22 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 98.21 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 98.16 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 98.16 | |
| 3fi9_A | 343 | Malate dehydrogenase; structural genomics, oxidore | 98.14 | |
| 3pwz_A | 272 | Shikimate dehydrogenase 3; alpha-beta, oxidoreduct | 98.13 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 98.12 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 98.1 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 98.1 | |
| 3gxh_A | 157 | Putative phosphatase (DUF442); YP_001181608.1, str | 98.09 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 98.08 | |
| 3o8q_A | 281 | Shikimate 5-dehydrogenase I alpha; structural geno | 98.08 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 98.07 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 98.07 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 98.06 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 98.06 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 98.06 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 98.05 | |
| 3pqe_A | 326 | L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas | 98.04 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 98.03 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 98.03 | |
| 4a0s_A | 447 | Octenoyl-COA reductase/carboxylase; oxidoreductase | 98.03 | |
| 3ond_A | 488 | Adenosylhomocysteinase; plant protein, enzyme-subs | 97.96 | |
| 3vku_A | 326 | L-LDH, L-lactate dehydrogenase; rossmann fold, NAD | 97.92 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 97.91 | |
| 1p9o_A | 313 | Phosphopantothenoylcysteine synthetase; ligase; 2. | 97.9 | |
| 3gaz_A | 343 | Alcohol dehydrogenase superfamily protein; oxidore | 97.87 | |
| 3fbg_A | 346 | Putative arginate lyase; structural genomics, unkn | 97.86 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 97.85 | |
| 4aj2_A | 331 | L-lactate dehydrogenase A chain; oxidoreductase-in | 97.84 | |
| 3tl2_A | 315 | Malate dehydrogenase; center for structural genomi | 97.84 | |
| 1lnq_A | 336 | MTHK channels, potassium channel related protein; | 97.83 | |
| 1gpj_A | 404 | Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro | 97.82 | |
| 2vn8_A | 375 | Reticulon-4-interacting protein 1; mitochondrion, | 97.79 | |
| 3gvi_A | 324 | Malate dehydrogenase; NAD, oxidoreductase, tricarb | 97.79 | |
| 2cf5_A | 357 | Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign | 97.77 | |
| 3phh_A | 269 | Shikimate dehydrogenase; shikimate pathway, helico | 97.77 | |
| 3fbt_A | 282 | Chorismate mutase and shikimate 5-dehydrogenase fu | 97.74 | |
| 1xa0_A | 328 | Putative NADPH dependent oxidoreductases; structur | 97.74 | |
| 3p7m_A | 321 | Malate dehydrogenase; putative dehydrogenase, enzy | 97.73 | |
| 1ur5_A | 309 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 97.73 | |
| 3nx4_A | 324 | Putative oxidoreductase; csgid, structural genomic | 97.72 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 97.72 | |
| 3krt_A | 456 | Crotonyl COA reductase; structural genomics, prote | 97.71 | |
| 3two_A | 348 | Mannitol dehydrogenase; cinnamyl-alcohol dehydroge | 97.69 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 97.68 | |
| 1e3j_A | 352 | NADP(H)-dependent ketose reductase; oxidoreductase | 97.68 | |
| 2hk9_A | 275 | Shikimate dehydrogenase; shikimate pathway, drug d | 97.67 | |
| 3ldh_A | 330 | Lactate dehydrogenase; oxidoreductase, CHOH donor, | 97.66 | |
| 1uuf_A | 369 | YAHK, zinc-type alcohol dehydrogenase-like protein | 97.65 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 97.65 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 97.64 | |
| 1oju_A | 294 | MDH, malate dehydrogenase; hyperthermophilic, oxid | 97.63 | |
| 1tt7_A | 330 | YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st | 97.63 | |
| 1h2b_A | 359 | Alcohol dehydrogenase; oxidoreductase, archaea, hy | 97.62 | |
| 1piw_A | 360 | Hypothetical zinc-type alcohol dehydrogenase- like | 97.62 | |
| 3m6i_A | 363 | L-arabinitol 4-dehydrogenase; medium chain dehydro | 97.61 | |
| 3uog_A | 363 | Alcohol dehydrogenase; structural genomics, protei | 97.6 | |
| 1pzg_A | 331 | LDH, lactate dehydrogenase; apicomplexa, APAD, tet | 97.6 | |
| 3nep_X | 314 | Malate dehydrogenase; halophIle, molecular adpatat | 97.58 | |
| 1y6j_A | 318 | L-lactate dehydrogenase; southeast collaboratory f | 97.56 | |
| 2v6b_A | 304 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ra | 97.55 | |
| 2dq4_A | 343 | L-threonine 3-dehydrogenase; NAD-dependent, oxidor | 97.54 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 97.54 | |
| 3u62_A | 253 | Shikimate dehydrogenase; shikimate pathway, oxidor | 97.52 | |
| 3hhp_A | 312 | Malate dehydrogenase; MDH, citric acid cycle, TCA | 97.51 | |
| 2vns_A | 215 | Metalloreductase steap3; metal-binding, transmembr | 97.51 | |
| 3tqh_A | 321 | Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella | 97.51 | |
| 4gx0_A | 565 | TRKA domain protein; membrane protein, ION channel | 97.5 | |
| 4h7p_A | 345 | Malate dehydrogenase; ssgcid, structural G seattle | 97.5 | |
| 3d0o_A | 317 | L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly | 97.49 | |
| 2h6e_A | 344 | ADH-4, D-arabinose 1-dehydrogenase; rossman fold, | 97.48 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 97.47 | |
| 3s2e_A | 340 | Zinc-containing alcohol dehydrogenase superfamily; | 97.46 | |
| 1leh_A | 364 | Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi | 97.46 | |
| 2b5w_A | 357 | Glucose dehydrogenase; nucleotide binding motif, o | 97.45 | |
| 2dph_A | 398 | Formaldehyde dismutase; dismutation of aldehydes, | 97.45 | |
| 1ez4_A | 318 | Lactate dehydrogenase; rossmann fold, oxidoreducta | 97.44 | |
| 3gqv_A | 371 | Enoyl reductase; medium-chain reductase (MDR super | 97.42 | |
| 1cdo_A | 374 | Alcohol dehydrogenase; oxidoreductase, oxidoreduct | 97.42 | |
| 4dvj_A | 363 | Putative zinc-dependent alcohol dehydrogenase Pro; | 97.42 | |
| 2ew2_A | 316 | 2-dehydropantoate 2-reductase, putative; alpha-str | 97.41 | |
| 2x0j_A | 294 | Malate dehydrogenase; oxidoreductase, hyperthermop | 97.4 | |
| 2zqz_A | 326 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ro | 97.38 | |
| 2d5c_A | 263 | AROE, shikimate 5-dehydrogenase; substrate, dimer, | 97.36 | |
| 2jhf_A | 374 | Alcohol dehydrogenase E chain; oxidoreductase, met | 97.34 | |
| 4ej6_A | 370 | Putative zinc-binding dehydrogenase; structural ge | 97.34 | |
| 2xxj_A | 310 | L-LDH, L-lactate dehydrogenase; oxidoreductase, hy | 97.32 | |
| 1kol_A | 398 | Formaldehyde dehydrogenase; oxidoreductase; HET: N | 97.32 | |
| 1e3i_A | 376 | Alcohol dehydrogenase, class II; HET: NAD; 2.08A { | 97.3 | |
| 1ldn_A | 316 | L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA | 97.29 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 97.28 | |
| 1vj0_A | 380 | Alcohol dehydrogenase, zinc-containing; TM0436, st | 97.27 | |
| 3goh_A | 315 | Alcohol dehydrogenase, zinc-containing; NP_718042. | 97.26 | |
| 2fzw_A | 373 | Alcohol dehydrogenase class III CHI chain; S-nitro | 97.26 | |
| 1l7d_A | 384 | Nicotinamide nucleotide transhydrogenase, subunit | 97.26 | |
| 1pl8_A | 356 | Human sorbitol dehydrogenase; NAD, oxidoreductase; | 97.26 | |
| 1t2d_A | 322 | LDH-P, L-lactate dehydrogenase; ternary complex, o | 97.26 | |
| 1guz_A | 310 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 97.25 | |
| 3ip1_A | 404 | Alcohol dehydrogenase, zinc-containing; structural | 97.24 | |
| 1x13_A | 401 | NAD(P) transhydrogenase subunit alpha; NAD(H)-bind | 97.24 | |
| 3uko_A | 378 | Alcohol dehydrogenase class-3; alcohol dehydrogena | 97.23 | |
| 1f8f_A | 371 | Benzyl alcohol dehydrogenase; rossmann fold, oxido | 97.2 | |
| 3p2y_A | 381 | Alanine dehydrogenase/pyridine nucleotide transhy; | 97.18 | |
| 1p0f_A | 373 | NADP-dependent alcohol dehydrogenase; ADH topology | 97.18 | |
| 3iup_A | 379 | Putative NADPH:quinone oxidoreductase; YP_296108.1 | 97.18 | |
| 1a5z_A | 319 | L-lactate dehydrogenase; oxidoreductase, glycolysi | 97.14 | |
| 3c24_A | 286 | Putative oxidoreductase; YP_511008.1, structural g | 97.11 | |
| 2hjr_A | 328 | Malate dehydrogenase; malaria, structural genomics | 97.1 | |
| 3h8v_A | 292 | Ubiquitin-like modifier-activating enzyme 5; rossm | 97.09 | |
| 1edz_A | 320 | 5,10-methylenetetrahydrofolate dehydrogenase; nucl | 97.07 | |
| 1zsy_A | 357 | Mitochondrial 2-enoyl thioester reductase; medium- | 97.06 | |
| 3jv7_A | 345 | ADH-A; dehydrogenase, nucleotide binding, rossmann | 97.06 | |
| 4gx0_A | 565 | TRKA domain protein; membrane protein, ION channel | 97.04 | |
| 4dio_A | 405 | NAD(P) transhydrogenase subunit alpha PART 1; stru | 97.03 | |
| 2ewd_A | 317 | Lactate dehydrogenase,; protein-substrate_cofactor | 97.02 | |
| 3lk7_A | 451 | UDP-N-acetylmuramoylalanine--D-glutamate ligase; a | 97.0 | |
| 3fpc_A | 352 | NADP-dependent alcohol dehydrogenase; oxydoreducta | 97.0 | |
| 3h5n_A | 353 | MCCB protein; ubiquitin-activating enzyme, microci | 97.0 | |
| 2nqt_A | 352 | N-acetyl-gamma-glutamyl-phosphate reductase; apopr | 96.98 | |
| 1zud_1 | 251 | Adenylyltransferase THIF; thiamin, thiazole, prote | 96.98 | |
| 1hyh_A | 309 | L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2 | 96.98 | |
| 2h78_A | 302 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601 | 96.95 | |
| 3g0o_A | 303 | 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine | 96.95 | |
| 3orq_A | 377 | N5-carboxyaminoimidazole ribonucleotide synthetas; | 96.95 | |
| 1lld_A | 319 | L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N | 96.9 | |
| 3ce6_A | 494 | Adenosylhomocysteinase; protein-substrate complex, | 96.84 | |
| 4dll_A | 320 | 2-hydroxy-3-oxopropionate reductase; structural ge | 96.84 | |
| 4e21_A | 358 | 6-phosphogluconate dehydrogenase (decarboxylating; | 96.83 | |
| 4huj_A | 220 | Uncharacterized protein; PSI-biology, nysgrc, stru | 96.83 | |
| 1gu7_A | 364 | Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s | 96.83 | |
| 3d1l_A | 266 | Putative NADP oxidoreductase BF3122; structural ge | 96.8 | |
| 7mdh_A | 375 | Protein (malate dehydrogenase); chloroplastic mala | 96.78 | |
| 4e12_A | 283 | Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 | 96.77 | |
| 1f0y_A | 302 | HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive | 96.76 | |
| 2ahr_A | 259 | Putative pyrroline carboxylate reductase; pyrrolin | 96.74 | |
| 3pef_A | 287 | 6-phosphogluconate dehydrogenase, NAD-binding; gam | 96.73 | |
| 3tum_A | 269 | Shikimate dehydrogenase family protein; rossmann-f | 96.72 | |
| 2d4a_B | 308 | Malate dehydrogenase; archaea, hyperthermophIle, o | 96.72 | |
| 3gvp_A | 435 | Adenosylhomocysteinase 3; protein CO-factor comple | 96.7 | |
| 3n58_A | 464 | Adenosylhomocysteinase; ssgcid, hydrolase, structu | 96.7 |
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=99.92 E-value=4.8e-25 Score=181.46 Aligned_cols=131 Identities=13% Similarity=0.111 Sum_probs=109.6
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
++++||+++||||++|||+++|++|+++|++|++++|++++++++.+++. +.++.++++|++|++++++.+ +
T Consensus 3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 82 (254)
T 4fn4_A 3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETY 82 (254)
T ss_dssp GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 56889999999999999999999999999999999999999888766654 567889999999999998743 7
Q ss_pred CCCcEEEeccCCCCC--C--CCCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 150 EGVTHVICCTGTTAF--P--SRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~--~--~~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
+++|+||||||+... + ..+.+++++.+++|+.|++++++++ +++.++||++||.++..+
T Consensus 83 G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~ 150 (254)
T 4fn4_A 83 SRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRG 150 (254)
T ss_dssp SCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCS
T ss_pred CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCC
Confidence 899999999997642 1 1233455778899999999999876 245689999999988654
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.3e-24 Score=177.46 Aligned_cols=132 Identities=12% Similarity=0.017 Sum_probs=108.9
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
.+++||+++||||++|||++++++|+++|++|++++|+++++++..+++. +.++..+++|++|++++++.+ +
T Consensus 5 f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (255)
T 4g81_D 5 FDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEG 84 (255)
T ss_dssp TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTT
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence 36789999999999999999999999999999999999998877665543 457888999999999998743 6
Q ss_pred CCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----c-cCCCeEEEEccccccccC
Q 028043 150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----P-SSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~-~~~~~iV~vSS~~~~~~~ 209 (214)
+++|+||||||...... .+.+++++.+++|+.|++++++++ + .+.++||++||.++..+.
T Consensus 85 G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~ 153 (255)
T 4g81_D 85 IHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAAR 153 (255)
T ss_dssp CCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBC
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCC
Confidence 78999999999875322 333456778899999999999865 2 245799999999886543
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=2.1e-23 Score=171.04 Aligned_cols=127 Identities=15% Similarity=0.186 Sum_probs=105.1
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCCcE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVTH 154 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~d~ 154 (214)
++|+|+||||++|||+++|++|+++|++|++++|++++++++.++ ..++..+++|++|++++++.+ ++++|+
T Consensus 1 MnK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDi 78 (247)
T 3ged_A 1 MNRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKE--RPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDV 78 (247)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTT--CTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh--cCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 358999999999999999999999999999999999988887655 346888999999999988743 689999
Q ss_pred EEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh----ccCCCeEEEEccccccccC
Q 028043 155 VICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 155 li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~----~~~~~~iV~vSS~~~~~~~ 209 (214)
||||||...... ...+++++.+++|+.|++++++++ ++..++||++||.++..+.
T Consensus 79 LVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~~ 140 (247)
T 3ged_A 79 LVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQSE 140 (247)
T ss_dssp EEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSCC
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccccCC
Confidence 999999865322 333455778899999999999876 3345899999999886543
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.89 E-value=7e-23 Score=171.07 Aligned_cols=132 Identities=20% Similarity=0.229 Sum_probs=110.9
Q ss_pred CCCCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh--hCCCc
Q 028043 76 VTPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--FEGVT 153 (214)
Q Consensus 76 ~~~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~--~~~~d 153 (214)
..+++++|+++||||+||||++++++|+++|++|++++|++++.++..+++ +.++.++.+|++|++++++++ ++++|
T Consensus 10 ~~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~v~~~~~~~~~iD 88 (291)
T 3rd5_A 10 DLPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM-AGQVEVRELDLQDLSSVRRFADGVSGAD 88 (291)
T ss_dssp GCCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS-SSEEEEEECCTTCHHHHHHHHHTCCCEE
T ss_pred hccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-cCCeeEEEcCCCCHHHHHHHHHhcCCCC
Confidence 346678999999999999999999999999999999999999988877665 457889999999999998743 24789
Q ss_pred EEEeccCCCCCCC-CCCCCCCchhHHHHHHHHHHHHHhcc-CCCeEEEEcccccccc
Q 028043 154 HVICCTGTTAFPS-RRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 154 ~li~~Ag~~~~~~-~~~~~~~~~~~vNv~g~~~l~~a~~~-~~~~iV~vSS~~~~~~ 208 (214)
+||||||+..... ...++.+..+++|+.|++++++++.+ ..++||++||.+++..
T Consensus 89 ~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~ 145 (291)
T 3rd5_A 89 VLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPG 145 (291)
T ss_dssp EEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTC
T ss_pred EEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccC
Confidence 9999999875322 34456678899999999999998854 4569999999988643
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.89 E-value=3.5e-23 Score=171.98 Aligned_cols=129 Identities=12% Similarity=0.116 Sum_probs=107.8
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
.++||+++||||++|||+++|++|+++|++|++++|+++++++..+++ +.++..+++|++|++++++.+ ++++
T Consensus 26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i 104 (273)
T 4fgs_A 26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI-GGGAVGIQADSANLAELDRLYEKVKAEAGRI 104 (273)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-CTTCEEEECCTTCHHHHHHHHHHHHHHHSCE
T ss_pred hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-CCCeEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 378999999999999999999999999999999999999998887776 456788999999999988743 6799
Q ss_pred cEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEcccccccc
Q 028043 153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 153 d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~~ 208 (214)
|+||||||...... .+.+++++.+++|+.|++++++++.+ ..++||++||.++..+
T Consensus 105 DiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~ 166 (273)
T 4fgs_A 105 DVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTG 166 (273)
T ss_dssp EEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSC
T ss_pred CEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccC
Confidence 99999999865322 23344577889999999999998843 2358999999988654
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.2e-23 Score=171.85 Aligned_cols=125 Identities=13% Similarity=0.080 Sum_probs=102.7
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh--hCCCcEEEe
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--FEGVTHVIC 157 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~--~~~~d~li~ 157 (214)
++||+++||||++|||++++++|+++|++|++++|+++.+++.. ..++..+++|++|++++++.+ ++++|+|||
T Consensus 9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVN 84 (242)
T 4b79_A 9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPR----HPRIRREELDITDSQRLQRLFEALPRLDVLVN 84 (242)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCC----CTTEEEEECCTTCHHHHHHHHHHCSCCSEEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhh----cCCeEEEEecCCCHHHHHHHHHhcCCCCEEEE
Confidence 58999999999999999999999999999999999987665422 457889999999999998744 679999999
Q ss_pred ccCCCCCC-CCCCCCCCchhHHHHHHHHHHHHHh----ccCCCeEEEEcccccccc
Q 028043 158 CTGTTAFP-SRRWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 158 ~Ag~~~~~-~~~~~~~~~~~~vNv~g~~~l~~a~----~~~~~~iV~vSS~~~~~~ 208 (214)
|||+.... ..+.+++++.+++|+.|++++++++ +++.++||++||.++..+
T Consensus 85 NAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~ 140 (242)
T 4b79_A 85 NAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTFG 140 (242)
T ss_dssp CCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTSC
T ss_pred CCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccCC
Confidence 99986521 1233445678899999999999876 234479999999988653
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.88 E-value=1.1e-22 Score=167.77 Aligned_cols=129 Identities=19% Similarity=0.181 Sum_probs=104.8
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC---CCCEEEEEecCCChhccchhh------
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
+++++|+++||||+||||++++++|+++|++|++++|+++++++..+++. ..++.++++|++|++++++++
T Consensus 6 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 85 (262)
T 3pk0_A 6 FDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEE 85 (262)
T ss_dssp TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 56789999999999999999999999999999999999988777655442 256889999999999988643
Q ss_pred hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccc
Q 028043 149 FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVT 206 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~ 206 (214)
++++|+||||||...... ...++++..+++|+.|++++++++. .+.++||++||.++.
T Consensus 86 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~ 151 (262)
T 3pk0_A 86 FGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGP 151 (262)
T ss_dssp HSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTT
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhc
Confidence 568999999999865321 1223345667999999999999762 256899999998874
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.88 E-value=8.8e-23 Score=167.70 Aligned_cols=131 Identities=11% Similarity=0.083 Sum_probs=106.7
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
+++++|+++||||+||||++++++|+++|++|++++|+.++++++.+++. +.++.++.+|++|++++++++ +
T Consensus 8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 87 (256)
T 3gaf_A 8 FHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQF 87 (256)
T ss_dssp TCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 56789999999999999999999999999999999999988777655442 457889999999999888643 4
Q ss_pred CCCcEEEeccCCCCCCC--CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 150 EGVTHVICCTGTTAFPS--RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~--~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
+++|+||||||...... ...++++..+++|+.|++++++++ +.+.++||++||.+++.+
T Consensus 88 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~ 153 (256)
T 3gaf_A 88 GKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENT 153 (256)
T ss_dssp SCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCC
T ss_pred CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCC
Confidence 68999999999875322 222334567899999999999976 235679999999988654
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.88 E-value=7.9e-23 Score=169.10 Aligned_cols=129 Identities=17% Similarity=0.197 Sum_probs=105.0
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
+++|+++||||+||||++++++|+++|++|++++|++++++++.+++. +..+.++.+|++|++++++++ +++
T Consensus 2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 81 (264)
T 3tfo_A 2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGR 81 (264)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 468999999999999999999999999999999999988877655543 456788999999999988643 568
Q ss_pred CcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccccc
Q 028043 152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~ 208 (214)
+|+||||||...... ...+++...+++|+.|++++++++. .+.++||++||.+++.+
T Consensus 82 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~ 146 (264)
T 3tfo_A 82 IDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSV 146 (264)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHccc
Confidence 999999999865321 2233446678999999999998762 35679999999988654
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=4.4e-23 Score=170.19 Aligned_cols=131 Identities=14% Similarity=0.106 Sum_probs=103.0
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhccc-CCCCEEEEEecCCChhccchhh------hC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ-DEETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
++++||+++||||++|||++++++|+++|++|++++|+.+..+.+.+.. .+.++.++.+|++|++++++.+ ++
T Consensus 3 ~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G 82 (258)
T 4gkb_A 3 LNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFG 82 (258)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhC
Confidence 5688999999999999999999999999999999999876543322111 1457889999999999988643 78
Q ss_pred CCcEEEeccCCCCCCC--CCCCCCCchhHHHHHHHHHHHHHh----ccCCCeEEEEcccccccc
Q 028043 151 GVTHVICCTGTTAFPS--RRWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~--~~~~~~~~~~~vNv~g~~~l~~a~----~~~~~~iV~vSS~~~~~~ 208 (214)
++|+||||||+..... ...++++..+++|+.|++++++++ +++.++||++||.++..+
T Consensus 83 ~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~ 146 (258)
T 4gkb_A 83 RLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVTG 146 (258)
T ss_dssp CCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHHC
T ss_pred CCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhccC
Confidence 9999999999865322 222334667799999999999876 334589999999987643
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.88 E-value=2e-22 Score=167.60 Aligned_cols=130 Identities=12% Similarity=0.104 Sum_probs=106.1
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
+++++|+++||||+||||++++++|+++|++|++++|+++.++++.+++ +.++.++++|++|++++++++ +++
T Consensus 23 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 101 (277)
T 4dqx_A 23 MDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI-GSKAFGVRVDVSSAKDAESMVEKTTAKWGR 101 (277)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-CTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 5678999999999999999999999999999999999998887776554 456889999999999988643 468
Q ss_pred CcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh----c-cCCCeEEEEcccccccc
Q 028043 152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~----~-~~~~~iV~vSS~~~~~~ 208 (214)
+|+||||||...... ...++++..+++|+.|+.++++++ + .+.++||++||.+++.+
T Consensus 102 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 166 (277)
T 4dqx_A 102 VDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSA 166 (277)
T ss_dssp CCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSC
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcC
Confidence 999999999865322 122334566789999999999876 2 34569999999988654
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.88 E-value=2.4e-22 Score=165.08 Aligned_cols=130 Identities=18% Similarity=0.184 Sum_probs=106.0
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
.+++|+++||||+||||++++++|+++|++|++++|++++++++.+++. +.++.++.+|++|++++++++ ++
T Consensus 3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 82 (257)
T 3imf_A 3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFG 82 (257)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4678999999999999999999999999999999999998887765554 356889999999999988643 46
Q ss_pred CCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----cc-CCCeEEEEcccccccc
Q 028043 151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PS-SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~-~~~~iV~vSS~~~~~~ 208 (214)
++|+||||||...... ...++++..+++|+.|++++++++ ++ +.++||++||..++.+
T Consensus 83 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 149 (257)
T 3imf_A 83 RIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDA 149 (257)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSC
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccC
Confidence 8999999999764321 223344667899999999999976 22 3679999999988654
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.7e-22 Score=165.38 Aligned_cols=129 Identities=12% Similarity=0.064 Sum_probs=102.3
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhH--HHHHhcccCCCCEEEEEecCCChhccchhh-hCCCcE
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK--ATTLFGKQDEETLQVCKGDTRNPKDLDPAI-FEGVTH 154 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~-~~~~d~ 154 (214)
.+++||+++||||++|||++++++|+++|++|++++|+.+. .+++.+. +.++..+.+|++|++++++.+ ++++|+
T Consensus 5 f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~--g~~~~~~~~Dv~d~~~v~~~~~~g~iDi 82 (247)
T 4hp8_A 5 FSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKD--GGNASALLIDFADPLAAKDSFTDAGFDI 82 (247)
T ss_dssp TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHT--TCCEEEEECCTTSTTTTTTSSTTTCCCE
T ss_pred cCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHh--CCcEEEEEccCCCHHHHHHHHHhCCCCE
Confidence 46889999999999999999999999999999999998532 2222221 457889999999999988743 468999
Q ss_pred EEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccC-CCeEEEEcccccccc
Q 028043 155 VICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSS-LKRIVLVSSVGVTKF 208 (214)
Q Consensus 155 li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~-~~~iV~vSS~~~~~~ 208 (214)
||||||+..... .+.+++++.+++|+.|++++++++ +++ .++||++||.++...
T Consensus 83 LVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g 145 (247)
T 4hp8_A 83 LVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQG 145 (247)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC
T ss_pred EEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCC
Confidence 999999875322 233455778899999999999865 233 479999999988653
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.88 E-value=1.2e-22 Score=164.95 Aligned_cols=127 Identities=15% Similarity=0.090 Sum_probs=101.4
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCCcE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVTH 154 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~d~ 154 (214)
++|+++||||+||||++++++|+++|++|++++|++++++++.+++. .++.++.+|++|++++++++ ++++|+
T Consensus 2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 80 (235)
T 3l6e_A 2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG-NAVIGIVADLAHHEDVDVAFAAAVEWGGLPEL 80 (235)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG-GGEEEEECCTTSHHHHHHHHHHHHHHHCSCSE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc-CCceEEECCCCCHHHHHHHHHHHHHhcCCCcE
Confidence 57899999999999999999999999999999999998887766553 36889999999999988643 468999
Q ss_pred EEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh----ccCCCeEEEEcccccccc
Q 028043 155 VICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 155 li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~----~~~~~~iV~vSS~~~~~~ 208 (214)
||||||...... ...+++.+.+++|+.|+.++++++ ++..++||++||.+++.+
T Consensus 81 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~ 141 (235)
T 3l6e_A 81 VLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVG 141 (235)
T ss_dssp EEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSS
T ss_pred EEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCC
Confidence 999999864321 222344667899999999999977 233349999999887654
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=99.88 E-value=9.6e-23 Score=166.73 Aligned_cols=130 Identities=20% Similarity=0.175 Sum_probs=106.0
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
+++++|+++||||+||||++++++|+++|++|++++|+++.++++.+.+. .....+++|++|++++++++ +++
T Consensus 5 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 83 (248)
T 3op4_A 5 MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLG-DNGKGMALNVTNPESIEAVLKAITDEFGG 83 (248)
T ss_dssp TCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG-GGEEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-ccceEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence 55789999999999999999999999999999999999988877665543 35778999999999988743 468
Q ss_pred CcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccccc
Q 028043 152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~ 208 (214)
+|+||||||...... ...+++++.+++|+.|++++++++. ++.++||++||.+++.+
T Consensus 84 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~ 148 (248)
T 3op4_A 84 VDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMG 148 (248)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCC
Confidence 999999999875321 2233446678999999999999762 35679999999887643
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.88 E-value=2.4e-22 Score=167.63 Aligned_cols=130 Identities=17% Similarity=0.193 Sum_probs=104.3
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
+++++|+++||||+||||++++++|+++|++|++++|+.++++++.+++. +.++.++++|++|++++++++ +
T Consensus 24 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 103 (283)
T 3v8b_A 24 MNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKF 103 (283)
T ss_dssp ---CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 45678999999999999999999999999999999999988887766554 456889999999999888643 5
Q ss_pred CCCcEEEeccCCCCC--C--CCCCCCCCchhHHHHHHHHHHHHHh----c-cCCCeEEEEccccccc
Q 028043 150 EGVTHVICCTGTTAF--P--SRRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~--~--~~~~~~~~~~~~vNv~g~~~l~~a~----~-~~~~~iV~vSS~~~~~ 207 (214)
+++|+||||||+... + ....+++++.+++|+.|++++++++ + .+.++||++||.+++.
T Consensus 104 g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~ 170 (283)
T 3v8b_A 104 GHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTR 170 (283)
T ss_dssp SCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTT
T ss_pred CCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhcc
Confidence 689999999998642 1 1222334567899999999999976 2 3568999999998765
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.88 E-value=2.6e-22 Score=164.99 Aligned_cols=130 Identities=13% Similarity=0.131 Sum_probs=105.7
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
.+++|+++||||+||||++++++|+++|++|++++|+.+++++..+++ +..+.++.+|++|++++++++ ++++
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 83 (259)
T 4e6p_A 5 RLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI-GPAAYAVQMDVTRQDSIDAAIAATVEHAGGL 83 (259)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-CTTEEEEECCTTCHHHHHHHHHHHHHHSSSC
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCCceEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence 467899999999999999999999999999999999999888776655 356889999999999888643 4589
Q ss_pred cEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cC-CCeEEEEccccccccC
Q 028043 153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SS-LKRIVLVSSVGVTKFN 209 (214)
Q Consensus 153 d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~-~~~iV~vSS~~~~~~~ 209 (214)
|+||||||...... ...+++.+.+++|+.|+.++++++. .+ .++||++||.+++.+.
T Consensus 84 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 149 (259)
T 4e6p_A 84 DILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGE 149 (259)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCC
Confidence 99999999865322 2233446677899999999999762 22 5699999999886543
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=4e-22 Score=164.45 Aligned_cols=131 Identities=18% Similarity=0.145 Sum_probs=105.4
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhccc----CCCCEEEEEecCCChhccchhh-----
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ----DEETLQVCKGDTRNPKDLDPAI----- 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~v~~Di~d~~~v~~~~----- 148 (214)
.++++|+++||||+||||++++++|+++|++|++++|++++++++.+++ ...++.++.+|++|++++++++
T Consensus 4 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 83 (265)
T 3lf2_A 4 YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACER 83 (265)
T ss_dssp CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 4578999999999999999999999999999999999998877655443 2335889999999999988643
Q ss_pred -hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccccc
Q 028043 149 -FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 -~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||...... ...+++...+++|+.|++++++++. .+.++||++||.+++.+
T Consensus 84 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 152 (265)
T 3lf2_A 84 TLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQP 152 (265)
T ss_dssp HHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSC
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCC
Confidence 568999999999865322 2223446678999999999999762 34578999999988654
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.9e-22 Score=167.75 Aligned_cols=130 Identities=18% Similarity=0.211 Sum_probs=106.0
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
.++++|+++||||+||||++++++|+++|++|++++|++++++++.+++ +.++.++.+|++|++++++++ +++
T Consensus 25 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 103 (277)
T 3gvc_A 25 PDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI-GCGAAACRVDVSDEQQIIAMVDACVAAFGG 103 (277)
T ss_dssp --CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-CSSCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-CCcceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 4568899999999999999999999999999999999998888776655 456889999999999887643 568
Q ss_pred CcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccccc
Q 028043 152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~ 208 (214)
+|+||||||...... ...++.++.+++|+.|++++++++. .+.++||++||.+++.+
T Consensus 104 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~ 168 (277)
T 3gvc_A 104 VDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVA 168 (277)
T ss_dssp CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSC
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccC
Confidence 999999999875322 2233446678999999999999762 35679999999988654
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.8e-22 Score=167.84 Aligned_cols=131 Identities=18% Similarity=0.177 Sum_probs=102.3
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
.++++|+++||||+||||++++++|+++|++|++++|+++++++..+++. +.++.++.+|++|++++++++ +
T Consensus 20 ~m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 99 (279)
T 3sju_A 20 HMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERF 99 (279)
T ss_dssp -----CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 45578999999999999999999999999999999999988777655443 457889999999999988643 5
Q ss_pred CCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-------cCCCeEEEEcccccccc
Q 028043 150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-------SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-------~~~~~iV~vSS~~~~~~ 208 (214)
+++|+||||||...... ...++.++.+++|+.|++++++++. .+.++||++||.+++.+
T Consensus 100 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~ 168 (279)
T 3sju_A 100 GPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQG 168 (279)
T ss_dssp CSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSC
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccC
Confidence 68999999999865321 2223345667899999999999762 24579999999988654
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=2.5e-22 Score=165.22 Aligned_cols=131 Identities=15% Similarity=0.144 Sum_probs=104.4
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC---CCCEEEEEecCCChhccchhh------
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
+++++|+++||||+||||++++++|+++|++|++++|++++++++.+++. +.++.++.+|++|++++++++
T Consensus 3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (263)
T 3ai3_A 3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSS 82 (263)
T ss_dssp CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 34678999999999999999999999999999999999887766544432 346888999999999888643
Q ss_pred hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccccc
Q 028043 149 FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||...... ...++++..+++|+.|+.++++++. .+.++||++||.+++.+
T Consensus 83 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 150 (263)
T 3ai3_A 83 FGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQP 150 (263)
T ss_dssp HSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCC
Confidence 458999999999864221 1222345677999999999998762 35689999999988764
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.8e-22 Score=168.17 Aligned_cols=129 Identities=20% Similarity=0.230 Sum_probs=105.3
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCC---CCEEEEEecCCChhccchhh------
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDE---ETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~v~~Di~d~~~v~~~~------ 148 (214)
.++++|+++||||+||||++++++|+++|++|++++|+.++++++.+++.. .++.++++|++|++++++++
T Consensus 37 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 116 (293)
T 3rih_A 37 FDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDA 116 (293)
T ss_dssp TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHH
Confidence 457899999999999999999999999999999999999887776555432 46889999999999887643
Q ss_pred hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccc
Q 028043 149 FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVT 206 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~ 206 (214)
++++|+||||||...... ...+++++.+++|+.|++++++++ +.+.++||++||.++.
T Consensus 117 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~ 182 (293)
T 3rih_A 117 FGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGP 182 (293)
T ss_dssp HSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTT
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhc
Confidence 568999999999875322 122334567899999999999987 3467899999998874
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.87 E-value=2.5e-22 Score=166.83 Aligned_cols=131 Identities=18% Similarity=0.190 Sum_probs=103.2
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcC------------hhHHHHHhcccC--CCCEEEEEecCCChhc
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD------------PEKATTLFGKQD--EETLQVCKGDTRNPKD 143 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~------------~~~~~~~~~~~~--~~~~~~v~~Di~d~~~ 143 (214)
.++++|+++||||+||||++++++|+++|++|++++|+ .+.+++..+.+. +.++.++.+|++|+++
T Consensus 6 ~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 85 (281)
T 3s55_A 6 ADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAA 85 (281)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHH
Confidence 45788999999999999999999999999999999997 444444333221 4578899999999999
Q ss_pred cchhh------hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 144 LDPAI------FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 144 v~~~~------~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
+++++ ++++|+||||||+..... ...+++++.+++|+.|++++++++ +.+.++||++||.+++.+
T Consensus 86 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 164 (281)
T 3s55_A 86 LESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSA 164 (281)
T ss_dssp HHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSC
T ss_pred HHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCC
Confidence 88743 468999999999875321 222334667799999999999976 235679999999988654
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.87 E-value=1.5e-22 Score=167.45 Aligned_cols=130 Identities=15% Similarity=0.172 Sum_probs=101.4
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
..+++|+++||||+||||++++++|+++|++|++++|+.++++++.+++ +.++.++.+|++|++++++++ +++
T Consensus 23 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 101 (266)
T 3grp_A 23 FKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL-GKDVFVFSANLSDRKSIKQLAEVAEREMEG 101 (266)
T ss_dssp TCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-CSSEEEEECCTTSHHHHHHHHHHHHHHHTS
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCceEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence 4578999999999999999999999999999999999999888776555 457889999999999988743 468
Q ss_pred CcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
+|+||||||...... ...+++.+.+++|+.|++++++++ +.+.++||++||.+++.+
T Consensus 102 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~ 166 (266)
T 3grp_A 102 IDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVG 166 (266)
T ss_dssp CCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-----
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCC
Confidence 999999999865321 122334567789999998888866 235679999999887653
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=3.6e-22 Score=164.13 Aligned_cols=131 Identities=16% Similarity=0.161 Sum_probs=104.5
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
+.+++|+++||||+||||++++++|+++|++|++++|++++++++.+++. +.++.++.+|++|++++++++ +
T Consensus 5 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (260)
T 2ae2_A 5 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF 84 (260)
T ss_dssp TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 45678999999999999999999999999999999999887766544332 346888999999999888643 3
Q ss_pred -CCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 150 -EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 150 -~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
+++|+||||||...... ...+++...+++|+.|+.++++++ +.+.++||++||.+++.+
T Consensus 85 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 152 (260)
T 2ae2_A 85 HGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALA 152 (260)
T ss_dssp TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSC
T ss_pred CCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccC
Confidence 78999999999864211 222334567799999999999977 235679999999987653
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=4.6e-22 Score=164.43 Aligned_cols=130 Identities=18% Similarity=0.161 Sum_probs=102.7
Q ss_pred CCCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhccc---CCCCEEEEEecCCChhccchhh-----
Q 028043 77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ---DEETLQVCKGDTRNPKDLDPAI----- 148 (214)
Q Consensus 77 ~~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~v~~Di~d~~~v~~~~----- 148 (214)
...+++|+++||||+||||++++++|+++|++|++++|++++++++.+++ .+.++.++.+|++|++++++++
T Consensus 16 ~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 95 (267)
T 1vl8_A 16 VFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKE 95 (267)
T ss_dssp -CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999999988776654433 1456888999999999887643
Q ss_pred -hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh----c-cCCCeEEEEcccc-cc
Q 028043 149 -FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVG-VT 206 (214)
Q Consensus 149 -~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~----~-~~~~~iV~vSS~~-~~ 206 (214)
++++|+||||||...... ...++....+++|+.|++++++++ + .+.++||++||.+ +.
T Consensus 96 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~ 163 (267)
T 1vl8_A 96 KFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEE 163 (267)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTC
T ss_pred HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhc
Confidence 468999999999865221 122234567789999999998876 2 3568999999987 54
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.7e-22 Score=165.84 Aligned_cols=126 Identities=21% Similarity=0.236 Sum_probs=101.5
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
.+++|+++||||+||||++++++|+++|++|++++|+.++++++. ..++.++.+|++|++++++++ ++++
T Consensus 13 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 88 (266)
T 3p19_A 13 GSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALN----LPNTLCAQVDVTDKYTFDTAITRAEKIYGPA 88 (266)
T ss_dssp --CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTC----CTTEEEEECCTTCHHHHHHHHHHHHHHHCSE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhh----cCCceEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence 356899999999999999999999999999999999998876643 346888999999999888643 4689
Q ss_pred cEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 153 d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
|+||||||...... ...+++++.+++|+.|++++++++ +.+.++||++||.+++.+
T Consensus 89 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~ 152 (266)
T 3p19_A 89 DAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKT 152 (266)
T ss_dssp EEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCC
Confidence 99999999875322 122233566899999999988866 246789999999988754
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=4e-22 Score=162.85 Aligned_cols=129 Identities=19% Similarity=0.218 Sum_probs=103.2
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
.+++|+++||||+||||++++++|+++|++|++++|++++++++.+++. +.++.++.+|++|++++++++ ++
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g 83 (247)
T 2jah_A 4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALG 83 (247)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 3578999999999999999999999999999999999988776654432 356888999999999888643 46
Q ss_pred CCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccccc
Q 028043 151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~ 208 (214)
++|+||||||...... ...++....+++|+.|+.++++++. .+ ++||++||.+++.+
T Consensus 84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~ 148 (247)
T 2jah_A 84 GLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVN 148 (247)
T ss_dssp CCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCC
T ss_pred CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCC
Confidence 8999999999864221 1222345677999999999998762 34 89999999987654
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.1e-22 Score=167.41 Aligned_cols=131 Identities=17% Similarity=0.242 Sum_probs=103.7
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--C---CCEEEEEecCCChhccchhh----
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--E---ETLQVCKGDTRNPKDLDPAI---- 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~---~~~~~v~~Di~d~~~v~~~~---- 148 (214)
+++++|+++||||+||||++++++|+++|++|++++|+++++++..+++. + ..+.++.+|++|++++++++
T Consensus 7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 86 (281)
T 3svt_A 7 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVT 86 (281)
T ss_dssp -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred cCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999999988776654432 1 26888999999999888643
Q ss_pred --hCCCcEEEeccCCCCCC----CCCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccccc
Q 028043 149 --FEGVTHVICCTGTTAFP----SRRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 --~~~~d~li~~Ag~~~~~----~~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||..... ....+++...+++|+.|++++++++. .+.++||++||.+++.+
T Consensus 87 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 157 (281)
T 3svt_A 87 AWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNT 157 (281)
T ss_dssp HHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSC
T ss_pred HHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCC
Confidence 56899999999974311 12223345678999999999999762 34569999999988654
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.7e-22 Score=165.10 Aligned_cols=131 Identities=17% Similarity=0.136 Sum_probs=105.5
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
..+++|+++||||+||||++++++|+++|++|++++|+.++++++.+++. +.++.++.+|++|++++++++ +
T Consensus 25 ~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 104 (262)
T 3rkr_A 25 SSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAH 104 (262)
T ss_dssp CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred hccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhc
Confidence 45678999999999999999999999999999999999988877655442 456889999999999988643 4
Q ss_pred CCCcEEEeccCCCCCCC----CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 150 EGVTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~----~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
+++|+||||||...... ...++....+++|+.|+.++++++ +.+.++||++||.+++.+
T Consensus 105 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~ 172 (262)
T 3rkr_A 105 GRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNP 172 (262)
T ss_dssp SCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCC
T ss_pred CCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCC
Confidence 68999999999843111 222334567899999999999976 235689999999988654
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=3.8e-22 Score=164.56 Aligned_cols=131 Identities=15% Similarity=0.157 Sum_probs=103.2
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC----CCCEEEEEecCCChhccchhh-----
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAI----- 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~v~~Di~d~~~v~~~~----- 148 (214)
..+++|+++||||+||||++++++|+++|++|++++|++++++++.+++. +.++.++.+|++|++++++++
T Consensus 9 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 88 (267)
T 1iy8_A 9 TRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTE 88 (267)
T ss_dssp -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 44678999999999999999999999999999999999887766544331 456888999999999888643
Q ss_pred -hCCCcEEEeccCCCCC-CC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 149 -FEGVTHVICCTGTTAF-PS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 -~~~~d~li~~Ag~~~~-~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||.... .. ...+++++.+++|+.|++++++++ +.+.++||++||.+++.+
T Consensus 89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 158 (267)
T 1iy8_A 89 RFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRG 158 (267)
T ss_dssp HHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSB
T ss_pred HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccC
Confidence 4689999999998642 11 122334567799999999888765 235689999999987653
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.8e-22 Score=163.79 Aligned_cols=130 Identities=17% Similarity=0.104 Sum_probs=100.6
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
+.+++|+++||||+||||++++++|+++|++|++++|++++++++.+++. +.++.++.+|++|++++++++ +
T Consensus 5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (253)
T 3qiv_A 5 MRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEF 84 (253)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 56789999999999999999999999999999999999988877655442 456888999999999988743 4
Q ss_pred CCCcEEEeccCCCCC-C-----CCCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEccccccc
Q 028043 150 EGVTHVICCTGTTAF-P-----SRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTK 207 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~-~-----~~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~ 207 (214)
+++|+||||||.... . ....++..+.+++|+.|+.++++++ +.+.++||++||.+++.
T Consensus 85 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~ 153 (253)
T 3qiv_A 85 GGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWL 153 (253)
T ss_dssp SCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC-----
T ss_pred CCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccC
Confidence 589999999998421 1 1122334567899999998888866 23567999999998863
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.8e-22 Score=165.49 Aligned_cols=131 Identities=11% Similarity=0.006 Sum_probs=104.5
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhhh-----C
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAIF-----E 150 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~~-----~ 150 (214)
+++++|+++||||+||||++++++|+++|++|++++|++++++++.+++. +.++.++.+|++|++++++++- +
T Consensus 3 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g 82 (252)
T 3h7a_A 3 LTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHA 82 (252)
T ss_dssp --CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhC
Confidence 34678999999999999999999999999999999999988777655442 4578899999999999887431 4
Q ss_pred CCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
++|+||||||...... ...++....+++|+.|++++++++ +.+.++||++||.+++.+
T Consensus 83 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 148 (252)
T 3h7a_A 83 PLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRG 148 (252)
T ss_dssp CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCC
T ss_pred CceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCC
Confidence 8999999999875321 222344667899999999999876 235579999999988654
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=99.87 E-value=6e-22 Score=162.25 Aligned_cols=131 Identities=18% Similarity=0.138 Sum_probs=104.1
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC---CCCEEEEEecC--CChhccchhh----
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDT--RNPKDLDPAI---- 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~v~~Di--~d~~~v~~~~---- 148 (214)
..+++|+++||||+||||++++++|+++|++|++++|++++++++.+++. ...+.++.+|+ +|++++++.+
T Consensus 8 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (252)
T 3f1l_A 8 DLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIA 87 (252)
T ss_dssp TTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999999988777654432 33678899999 8988877633
Q ss_pred --hCCCcEEEeccCCCCC--CC--CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 149 --FEGVTHVICCTGTTAF--PS--RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 --~~~~d~li~~Ag~~~~--~~--~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||.... +. ...+++++.+++|+.|++++++++ +.+.++||++||.+++.+
T Consensus 88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~ 158 (252)
T 3f1l_A 88 VNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQG 158 (252)
T ss_dssp HHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSC
T ss_pred HhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccC
Confidence 4689999999998532 11 222233567899999999999976 235689999999987654
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.2e-22 Score=168.43 Aligned_cols=131 Identities=12% Similarity=0.063 Sum_probs=106.3
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
+++++|+++||||+||||++++++|+++|++|++++|+++++++..+++. +.++.++.+|++|++++++++ +
T Consensus 22 ~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 101 (271)
T 4ibo_A 22 FDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQG 101 (271)
T ss_dssp GCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHT
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence 45789999999999999999999999999999999999988877655443 457889999999999988743 4
Q ss_pred CCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccccc
Q 028043 150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~ 208 (214)
+++|+||||||+..... ...+++++.+++|+.|++++++++. .+.++||++||.++..+
T Consensus 102 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~ 168 (271)
T 4ibo_A 102 IDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELA 168 (271)
T ss_dssp CCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSB
T ss_pred CCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCC
Confidence 58999999999865322 2333456678999999999988762 35679999999887654
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=4.5e-22 Score=163.18 Aligned_cols=128 Identities=16% Similarity=0.112 Sum_probs=103.0
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCCc
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVT 153 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~d 153 (214)
+++|+++||||+||||++++++|+++|++|++++|++++++++.+++ +.++.++.+|++|++++++++ ++++|
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD 81 (254)
T 1hdc_A 3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-GDAARYQHLDVTIEEDWQRVVAYAREEFGSVD 81 (254)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-GGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCceeEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 56899999999999999999999999999999999998887766554 346888999999999888643 45899
Q ss_pred EEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh----c-cCCCeEEEEcccccccc
Q 028043 154 HVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 154 ~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~----~-~~~~~iV~vSS~~~~~~ 208 (214)
+||||||...... ...+++...+++|+.|+.++++++ + .+.++||++||.+++.+
T Consensus 82 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 144 (254)
T 1hdc_A 82 GLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMG 144 (254)
T ss_dssp EEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccC
Confidence 9999999864221 222344567899999999777755 2 35689999999987654
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.87 E-value=4e-22 Score=165.06 Aligned_cols=130 Identities=15% Similarity=0.046 Sum_probs=106.3
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
..+++|+++||||+||||++++++|+++|++|++++|+++++++..+++ +.++.++.+|++|++++++++ +++
T Consensus 7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 85 (271)
T 3tzq_B 7 AELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV-GRGAVHHVVDLTNEVSVRALIDFTIDTFGR 85 (271)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH-CTTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-CCCeEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 3567899999999999999999999999999999999998887766555 456888999999999988743 468
Q ss_pred CcEEEeccCCCCCCC-----CCCCCCCchhHHHHHHHHHHHHHh----c-cCCCeEEEEcccccccc
Q 028043 152 VTHVICCTGTTAFPS-----RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~-----~~~~~~~~~~~vNv~g~~~l~~a~----~-~~~~~iV~vSS~~~~~~ 208 (214)
+|+||||||...... ...+++++.+++|+.|++++++++ + .+.++||++||.+++.+
T Consensus 86 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~ 152 (271)
T 3tzq_B 86 LDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAA 152 (271)
T ss_dssp CCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSB
T ss_pred CCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCC
Confidence 999999999874211 122334567899999999999977 2 35679999999988654
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=2.3e-22 Score=164.43 Aligned_cols=130 Identities=15% Similarity=0.157 Sum_probs=106.4
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
..+++|+++||||+||||++++++|+++|++|++++|+++++++..+++ +.++.++.+|++|++++++++ +++
T Consensus 2 ~~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 80 (247)
T 3rwb_A 2 ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI-GKKARAIAADISDPGSVKALFAEIQALTGG 80 (247)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-CTTEEECCCCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence 3467899999999999999999999999999999999999888776655 457889999999999988743 468
Q ss_pred CcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh----c-cC-CCeEEEEcccccccc
Q 028043 152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SS-LKRIVLVSSVGVTKF 208 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~----~-~~-~~~iV~vSS~~~~~~ 208 (214)
+|+||||||...... ...+++++.+++|+.|++++++++ + .+ .++||++||.+++.+
T Consensus 81 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 146 (247)
T 3rwb_A 81 IDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAG 146 (247)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHT
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccC
Confidence 999999999875321 223344667899999999999975 2 23 579999999887653
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=2.9e-22 Score=164.83 Aligned_cols=128 Identities=16% Similarity=0.180 Sum_probs=102.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEE-EcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLL-LRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~-~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
++|+++||||+||||++++++|+++|++|+++ +|+.+.++++.+++. +.++.++.+|++|++++++++ +++
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 82 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR 82 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 57999999999999999999999999999997 888887776655432 457889999999999988643 568
Q ss_pred CcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
+|+||||||...... ...++++..+++|+.|++++++++ +.+.++||++||.+++.+
T Consensus 83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~ 147 (258)
T 3oid_A 83 LDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRY 147 (258)
T ss_dssp CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSB
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCC
Confidence 999999999764321 222334567899999999999976 234579999999988654
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.9e-22 Score=165.46 Aligned_cols=131 Identities=15% Similarity=0.119 Sum_probs=105.4
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC---CCCEEEEEecCCChhccchhh------
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
+.+++|+++||||+||||++++++|+++|++|++++|+++++++..+++. +.++.++++|++|++++++++
T Consensus 16 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 95 (266)
T 4egf_A 16 LRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEA 95 (266)
T ss_dssp GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 45788999999999999999999999999999999999988776554432 457899999999999887643
Q ss_pred hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cC-CCeEEEEcccccccc
Q 028043 149 FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SS-LKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~-~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||...... ...++++..+++|+.|++++++++. .+ .++||++||.+++.+
T Consensus 96 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~ 164 (266)
T 4egf_A 96 FGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAP 164 (266)
T ss_dssp HTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC
T ss_pred cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccC
Confidence 568999999999875322 2223345677999999999999762 22 469999999988654
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.87 E-value=5.2e-22 Score=164.54 Aligned_cols=130 Identities=18% Similarity=0.200 Sum_probs=103.8
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcC------------hhHHHHHhcccC--CCCEEEEEecCCChhc
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD------------PEKATTLFGKQD--EETLQVCKGDTRNPKD 143 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~------------~~~~~~~~~~~~--~~~~~~v~~Di~d~~~ 143 (214)
..+++|+++||||+||||++++++|+++|++|++++|+ .+.+++..+.+. +.++.++++|++|+++
T Consensus 9 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 88 (278)
T 3sx2_A 9 GPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRES 88 (278)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHH
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHH
Confidence 45789999999999999999999999999999999987 555554433322 4578999999999999
Q ss_pred cchhh------hCCCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-----cC-CCeEEEEcccccccc
Q 028043 144 LDPAI------FEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-----SS-LKRIVLVSSVGVTKF 208 (214)
Q Consensus 144 v~~~~------~~~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-----~~-~~~iV~vSS~~~~~~ 208 (214)
+++++ ++++|+||||||+..... ..+++.+.+++|+.|++++++++. ++ .++||++||.+++..
T Consensus 89 v~~~~~~~~~~~g~id~lv~nAg~~~~~~-~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~ 164 (278)
T 3sx2_A 89 LSAALQAGLDELGRLDIVVANAGIAPMSA-GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAG 164 (278)
T ss_dssp HHHHHHHHHHHHCCCCEEEECCCCCCCSS-THHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCC
Confidence 88743 468999999999875322 334456788999999999999762 22 579999999987654
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=99.87 E-value=3e-22 Score=164.49 Aligned_cols=130 Identities=16% Similarity=0.145 Sum_probs=106.9
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
.+++|+++||||+||||++++++|+++|++|++++|++++++++.+++ +.++.++.+|++|++++++.+ ++++
T Consensus 5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 83 (255)
T 4eso_A 5 NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF-GPRVHALRSDIADLNEIAVLGAAAGQTLGAI 83 (255)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-GGGEEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCcceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 467899999999999999999999999999999999999888776655 357889999999999887633 5689
Q ss_pred cEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEccccccccC
Q 028043 153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 153 d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~~~ 209 (214)
|+||||||...... ...+++++.+++|+.|++++++++.+ ..++||++||.+++.+.
T Consensus 84 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 146 (255)
T 4eso_A 84 DLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGH 146 (255)
T ss_dssp EEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBC
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCC
Confidence 99999999875322 23334566789999999999998843 23689999999887543
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.2e-22 Score=166.75 Aligned_cols=131 Identities=16% Similarity=0.104 Sum_probs=105.2
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
..+++|+++||||+||||++++++|+++|++|++++|+++.++++.+++. +.++..+.+|++|++++++++ +
T Consensus 24 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 103 (270)
T 3ftp_A 24 KTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEF 103 (270)
T ss_dssp CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence 34678999999999999999999999999999999999988776654432 446788999999999888643 4
Q ss_pred CCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccccc
Q 028043 150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~ 208 (214)
+++|+||||||+..... ...++++..+++|+.|++++++++. .+.++||++||.+++.+
T Consensus 104 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~ 170 (270)
T 3ftp_A 104 GALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAG 170 (270)
T ss_dssp SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCC
Confidence 68999999999865322 2223446678999999999999762 35679999999887643
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.87 E-value=4.8e-22 Score=163.88 Aligned_cols=130 Identities=14% Similarity=0.122 Sum_probs=105.1
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
.+++|+++||||+||||++++++|+++|++|++++|+.++++++.+++. +.++.++++|++|++++++++ ++
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 87 (264)
T 3ucx_A 8 LLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYG 87 (264)
T ss_dssp TTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4678999999999999999999999999999999999988877655442 457889999999999988643 56
Q ss_pred CCcEEEeccCCCCCC----CCCCCCCCchhHHHHHHHHHHHHHhc----cCCCeEEEEcccccccc
Q 028043 151 GVTHVICCTGTTAFP----SRRWDGDNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~----~~~~~~~~~~~~vNv~g~~~l~~a~~----~~~~~iV~vSS~~~~~~ 208 (214)
++|+||||||..... ....+++.+.+++|+.|++++++++. +..++||++||.+++.+
T Consensus 88 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 153 (264)
T 3ucx_A 88 RVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRHS 153 (264)
T ss_dssp CCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGCC
T ss_pred CCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhccC
Confidence 899999999985321 12233446678999999999999762 22379999999988654
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=5.9e-22 Score=164.11 Aligned_cols=131 Identities=15% Similarity=0.140 Sum_probs=104.9
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
+.+++|+++||||+||||++++++|+++|++|++++|++++++++.+++. +.++.++.+|++|++++++++ +
T Consensus 17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 96 (273)
T 1ae1_A 17 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVF 96 (273)
T ss_dssp CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 45678999999999999999999999999999999999887766544332 456888999999999988643 3
Q ss_pred -CCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 150 -EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 150 -~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
+++|+||||||...... ...++....+++|+.|++++++++ +.+.++||++||.+++.+
T Consensus 97 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~ 164 (273)
T 1ae1_A 97 DGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSA 164 (273)
T ss_dssp TSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSC
T ss_pred CCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCC
Confidence 78999999999864221 122234556789999999999976 235689999999988754
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=3e-22 Score=165.76 Aligned_cols=131 Identities=16% Similarity=0.159 Sum_probs=103.9
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEc-ChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-DPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r-~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
+++++|+++||||+||||++++++|+++|++|++++| +.+..+++.+++. +.++.++.+|++|++++++++
T Consensus 24 ~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~ 103 (269)
T 4dmm_A 24 LPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIER 103 (269)
T ss_dssp CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 5678999999999999999999999999999999998 5555555444332 457889999999999988643
Q ss_pred hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 149 FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||...... ...++++..+++|+.|++++++++ +.+.++||++||.+++.+
T Consensus 104 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~ 171 (269)
T 4dmm_A 104 WGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMG 171 (269)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHC
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCC
Confidence 468999999999875321 223345667899999999999976 235689999999887643
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.87 E-value=7.5e-22 Score=160.88 Aligned_cols=133 Identities=17% Similarity=0.137 Sum_probs=102.8
Q ss_pred CCCCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh--hCCCc
Q 028043 76 VTPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--FEGVT 153 (214)
Q Consensus 76 ~~~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~--~~~~d 153 (214)
.....++|+|+||||+||||++++++|+++|++|++++|+.++++++.+.+. ..+.++.+|++|.+++++.+ ++++|
T Consensus 8 ~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~id 86 (249)
T 3f9i_A 8 HMIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK-DNYTIEVCNLANKEECSNLISKTSNLD 86 (249)
T ss_dssp -CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC-SSEEEEECCTTSHHHHHHHHHTCSCCS
T ss_pred ccccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc-cCccEEEcCCCCHHHHHHHHHhcCCCC
Confidence 3466789999999999999999999999999999999999998887766553 46888999999999988743 34799
Q ss_pred EEEeccCCCCCC---CCCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEccccccccC
Q 028043 154 HVICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 154 ~li~~Ag~~~~~---~~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~~ 209 (214)
+||||||..... ....++....+++|+.|+.++++++ +.+.++||++||.+++.+.
T Consensus 87 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~ 150 (249)
T 3f9i_A 87 ILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGN 150 (249)
T ss_dssp EEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CC
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCC
Confidence 999999987532 1233455778899999999999876 2356799999999886543
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.87 E-value=3.6e-22 Score=166.33 Aligned_cols=131 Identities=14% Similarity=0.166 Sum_probs=103.6
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEc-ChhHHHHHhcccC---CCCEEEEEecCCChhccchhh-----
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-DPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAI----- 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r-~~~~~~~~~~~~~---~~~~~~v~~Di~d~~~v~~~~----- 148 (214)
+++++|+++||||+||||++++++|+++|++|++++| +.+.++++.+++. +..+.++.+|++|++++++++
T Consensus 21 ~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 100 (281)
T 3v2h_A 21 QSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVAD 100 (281)
T ss_dssp -CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHH
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHH
Confidence 4567899999999999999999999999999999999 5566655544332 457889999999999988643
Q ss_pred -hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 149 -FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 -~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||...... ...+++...+++|+.|++++++++ +.+.++||++||.+++.+
T Consensus 101 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~ 169 (281)
T 3v2h_A 101 RFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVA 169 (281)
T ss_dssp HTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC
T ss_pred HCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccC
Confidence 468999999999865322 122344567899999999999976 235679999999988654
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.87 E-value=6.4e-22 Score=164.38 Aligned_cols=131 Identities=17% Similarity=0.130 Sum_probs=104.1
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEc-------------ChhHHHHHhcccC--CCCEEEEEecCCChh
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-------------DPEKATTLFGKQD--EETLQVCKGDTRNPK 142 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r-------------~~~~~~~~~~~~~--~~~~~~v~~Di~d~~ 142 (214)
..+++|+++||||+||||++++++|+++|++|++++| ++++++++.+.+. +.++.++.+|++|++
T Consensus 11 ~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~ 90 (280)
T 3pgx_A 11 GSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDA 90 (280)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHH
Confidence 4578899999999999999999999999999999998 5666666544332 457889999999999
Q ss_pred ccchhh------hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cC-CCeEEEEccccccc
Q 028043 143 DLDPAI------FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SS-LKRIVLVSSVGVTK 207 (214)
Q Consensus 143 ~v~~~~------~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~-~~~iV~vSS~~~~~ 207 (214)
++++++ ++++|+||||||...... ...+++++.+++|+.|++++++++. .+ .++||++||.+++.
T Consensus 91 ~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~ 170 (280)
T 3pgx_A 91 ALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLK 170 (280)
T ss_dssp HHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTS
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhcc
Confidence 988743 468999999999875322 2223445677899999999999762 23 57899999998865
Q ss_pred c
Q 028043 208 F 208 (214)
Q Consensus 208 ~ 208 (214)
+
T Consensus 171 ~ 171 (280)
T 3pgx_A 171 A 171 (280)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=3.8e-22 Score=162.47 Aligned_cols=130 Identities=14% Similarity=0.052 Sum_probs=104.7
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
++++|+++||||+||||++++++|+++|++|++++|++++.+++.+++. +.++.++.+|++|++++++++ ++
T Consensus 2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (247)
T 3lyl_A 2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENL 81 (247)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4678999999999999999999999999999999999988776654432 457889999999999988743 45
Q ss_pred CCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccccc
Q 028043 151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~ 208 (214)
++|+||||||+..... ...++..+.+++|+.|+.++++++. .+.++||++||.+++.+
T Consensus 82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~ 147 (247)
T 3lyl_A 82 AIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAG 147 (247)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC
T ss_pred CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccC
Confidence 7999999999875321 2223446678999999999998762 35579999999887643
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.87 E-value=4.2e-22 Score=165.96 Aligned_cols=128 Identities=14% Similarity=0.115 Sum_probs=105.0
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
.+++|+++||||+||||++++++|+++|++|++++|++++++++.+++. +.++.++.+|++|++++++++ ++
T Consensus 5 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 84 (280)
T 3tox_A 5 RLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFG 84 (280)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4678999999999999999999999999999999999988887766554 456888999999999988643 46
Q ss_pred CCcEEEeccCCCCCC----CCCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccc
Q 028043 151 GVTHVICCTGTTAFP----SRRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVT 206 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~----~~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~ 206 (214)
++|+||||||..... ....++....+++|+.|++++++++. .+.++||++||..++
T Consensus 85 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~ 149 (280)
T 3tox_A 85 GLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGH 149 (280)
T ss_dssp CCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTT
T ss_pred CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhC
Confidence 899999999976321 12233456678999999999999762 355799999999886
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.1e-21 Score=158.48 Aligned_cols=119 Identities=20% Similarity=0.337 Sum_probs=98.7
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCE-EEEEecCCChhccchhhhCCCcEEE
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETL-QVCKGDTRNPKDLDPAIFEGVTHVI 156 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~v~~Di~d~~~v~~~~~~~~d~li 156 (214)
..+++|+|+||||+|+||++++++|+++|++|++++|++++.+++.. .++ +++.+|++ +++.+ .++++|+||
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~----~~~~~~~~~Dl~--~~~~~-~~~~~D~vi 89 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE----RGASDIVVANLE--EDFSH-AFASIDAVV 89 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----TTCSEEEECCTT--SCCGG-GGTTCSEEE
T ss_pred cCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh----CCCceEEEcccH--HHHHH-HHcCCCEEE
Confidence 56789999999999999999999999999999999999988776542 367 89999999 77776 478999999
Q ss_pred eccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEcccccccc
Q 028043 157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 157 ~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~ 208 (214)
||||.... ++....+++|+.|+.+++++++ .+.++||++||.++..+
T Consensus 90 ~~ag~~~~-----~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~ 137 (236)
T 3e8x_A 90 FAAGSGPH-----TGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDP 137 (236)
T ss_dssp ECCCCCTT-----SCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCG
T ss_pred ECCCCCCC-----CCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCC
Confidence 99997641 3456678999999999999985 57899999999776543
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=8.7e-22 Score=163.52 Aligned_cols=130 Identities=16% Similarity=0.164 Sum_probs=103.5
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
.+++|+++||||+||||++++++|+++|++|++++|++++++++.+++. +.++.++.+|++|++++++++ ++
T Consensus 19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 98 (277)
T 2rhc_B 19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYG 98 (277)
T ss_dssp CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 4678999999999999999999999999999999999987766544432 346888999999999887643 45
Q ss_pred CCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhcc-------CCCeEEEEcccccccc
Q 028043 151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS-------SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~-------~~~~iV~vSS~~~~~~ 208 (214)
++|+||||||...... ...+++...+++|+.|+.++++++.+ +.++||++||.+++.+
T Consensus 99 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~ 166 (277)
T 2rhc_B 99 PVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQG 166 (277)
T ss_dssp SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSC
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccC
Confidence 8999999999864221 12223456779999999999998743 3479999999987643
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.87 E-value=3.5e-22 Score=165.74 Aligned_cols=128 Identities=19% Similarity=0.165 Sum_probs=102.4
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCCc
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVT 153 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~d 153 (214)
+++|+++||||+||||++++++|+++|++|++++|+.++++++.+.. +.++.++.+|++|.+++++++ ++++|
T Consensus 3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id 81 (281)
T 3m1a_A 3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY-PDRAEAISLDVTDGERIDVVAADVLARYGRVD 81 (281)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC-TTTEEEEECCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-cCCceEEEeeCCCHHHHHHHHHHHHHhCCCCC
Confidence 46799999999999999999999999999999999998877765544 357899999999999988643 45899
Q ss_pred EEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh----c-cCCCeEEEEcccccccc
Q 028043 154 HVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 154 ~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~----~-~~~~~iV~vSS~~~~~~ 208 (214)
+||||||...... ...++....+++|+.|+.++++++ + .+.++||++||.+++.+
T Consensus 82 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~ 144 (281)
T 3m1a_A 82 VLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLS 144 (281)
T ss_dssp EEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCC
Confidence 9999999865321 222334567799999977777755 2 36689999999988654
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.2e-21 Score=159.76 Aligned_cols=123 Identities=15% Similarity=0.113 Sum_probs=99.7
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
.+++|+++||||+||||++++++|+++|++|++++|++++++++.+++ ++.++.+|++|++++++++ ++++
T Consensus 2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 78 (245)
T 1uls_A 2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV---GAHPVVMDVADPASVERGFAEALAHLGRL 78 (245)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---TCEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 357899999999999999999999999999999999998887765544 3778999999999887643 4689
Q ss_pred cEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccc
Q 028043 153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVG 204 (214)
Q Consensus 153 d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~ 204 (214)
|+||||||...... ...++.++.+++|+.|+.++++++. ++.++||++||.+
T Consensus 79 d~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~ 138 (245)
T 1uls_A 79 DGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV 138 (245)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch
Confidence 99999999864221 1223345677999999999988762 2467999999988
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.87 E-value=8.1e-22 Score=163.78 Aligned_cols=131 Identities=18% Similarity=0.204 Sum_probs=103.9
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCC-CCEEEEEecCCChhccchhh------hC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDE-ETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
+++++|+++||||+||||++++++|+++|++|++++|++++++++.+++.. .++.++.+|++|++++++++ ++
T Consensus 25 ~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 104 (276)
T 2b4q_A 25 FSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSA 104 (276)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCS
T ss_pred cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence 457889999999999999999999999999999999999887766554432 26788899999999887643 45
Q ss_pred CCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCC----CeEEEEcccccccc
Q 028043 151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSL----KRIVLVSSVGVTKF 208 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~----~~iV~vSS~~~~~~ 208 (214)
++|+||||||...... ...++++..+++|+.|++++++++. .+. ++||++||.+++.+
T Consensus 105 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~ 174 (276)
T 2b4q_A 105 RLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISA 174 (276)
T ss_dssp CCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCC
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCC
Confidence 8999999999865321 1223345678999999999888762 233 79999999988654
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.9e-22 Score=164.37 Aligned_cols=130 Identities=20% Similarity=0.219 Sum_probs=96.8
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
+.+++|+++||||+||||++++++|+++|++|++++|+++..++..+++ +.++.++.+|++|++++++++ +++
T Consensus 3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 81 (257)
T 3tpc_A 3 MQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL-GAAVRFRNADVTNEADATAALAFAKQEFGH 81 (257)
T ss_dssp -CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC-------------CEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-CCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4567899999999999999999999999999999999988877765554 356788999999999988643 468
Q ss_pred CcEEEeccCCCCCCC-------CCCCCCCchhHHHHHHHHHHHHHhc----c-------CCCeEEEEcccccccc
Q 028043 152 VTHVICCTGTTAFPS-------RRWDGDNTPEKVDWEGVRNLVSALP----S-------SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~-------~~~~~~~~~~~vNv~g~~~l~~a~~----~-------~~~~iV~vSS~~~~~~ 208 (214)
+|+||||||...... ...+++.+.+++|+.|++++++++. + +.++||++||.+++.+
T Consensus 82 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~ 156 (257)
T 3tpc_A 82 VHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDG 156 (257)
T ss_dssp CCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC
T ss_pred CCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccC
Confidence 999999999875211 1223445677999999999999772 1 3468999999987654
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=7.2e-22 Score=162.59 Aligned_cols=129 Identities=18% Similarity=0.197 Sum_probs=102.8
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
.+++|+++||||+||||++++++|+++|++|++++|++++.+++.+++. ..+.++.+|++|++++++++ ++++
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 82 (260)
T 1nff_A 4 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA-DAARYVHLDVTQPAQWKAAVDTAVTAFGGL 82 (260)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG-GGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh-cCceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 3578999999999999999999999999999999999988776654442 34788999999999988643 4589
Q ss_pred cEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 153 d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
|+||||||...... ...++..+.+++|+.|+.++++++ +.+.++||++||.+++.+
T Consensus 83 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 146 (260)
T 1nff_A 83 HVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAG 146 (260)
T ss_dssp CEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCC
Confidence 99999999865321 122334567899999998887765 235689999999988654
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.86 E-value=3.9e-22 Score=162.65 Aligned_cols=128 Identities=20% Similarity=0.234 Sum_probs=101.4
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEc-ChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-DPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r-~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
+++|+++||||+||||++++++|+++|++|++++| ++++++++.+++. +.++.++.+|++|++++++++ ++
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 81 (246)
T 2uvd_A 2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFG 81 (246)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 46899999999999999999999999999999999 7777666544332 456888999999999888643 45
Q ss_pred CCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEccccccc
Q 028043 151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTK 207 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~ 207 (214)
++|+||||||...... ...++++..+++|+.|+.++++++ +.+.++||++||.+++.
T Consensus 82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~ 146 (246)
T 2uvd_A 82 QVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVT 146 (246)
T ss_dssp CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcC
Confidence 8999999999864221 222334567899999998888866 23568999999987754
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=3.6e-22 Score=162.96 Aligned_cols=129 Identities=17% Similarity=0.161 Sum_probs=101.3
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEc-ChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-DPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r-~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
+++|+++||||+||||++++++|+++|++|++++| +.++.+++.+++. +.++.++++|++|++++++++ ++
T Consensus 2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 81 (246)
T 3osu_A 2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFG 81 (246)
T ss_dssp CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 46799999999999999999999999999999887 4455555544332 456889999999999988643 46
Q ss_pred CCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
++|+||||||...... ...+++++.+++|+.|+.++++++ +++.++||++||.+++.+
T Consensus 82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 147 (246)
T 3osu_A 82 SLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVG 147 (246)
T ss_dssp CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCC
Confidence 8999999999875321 122334567899999999999977 235679999999887654
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.86 E-value=5.6e-22 Score=164.80 Aligned_cols=131 Identities=15% Similarity=0.191 Sum_probs=104.8
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
+++++|+++||||+||||++++++|+++|++|++++|+++.++++.+++. +.++.++++|++|++++++++ +
T Consensus 28 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 107 (276)
T 3r1i_A 28 FDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGEL 107 (276)
T ss_dssp GCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 45788999999999999999999999999999999999888776655443 456888999999999988743 4
Q ss_pred CCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cC-CCeEEEEcccccccc
Q 028043 150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SS-LKRIVLVSSVGVTKF 208 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~-~~~iV~vSS~~~~~~ 208 (214)
+++|+||||||...... ...++.++.+++|+.|++++++++. .+ .++||++||.+++..
T Consensus 108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~ 175 (276)
T 3r1i_A 108 GGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHII 175 (276)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhccc
Confidence 68999999999875322 2223345667899999999999762 23 378999999987653
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.6e-21 Score=160.37 Aligned_cols=130 Identities=17% Similarity=0.110 Sum_probs=104.0
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
+.+++|+++||||+||||++++++|+++|++|++++|++++.+++.+++.. ++.++.+|++|++++++++ +++
T Consensus 8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~D~~d~~~v~~~~~~~~~~~g~ 86 (263)
T 3ak4_A 8 FDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLEN-GGFAVEVDVTKRASVDAAMQKAIDALGG 86 (263)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTT-CCEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-CCeEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence 446789999999999999999999999999999999999888776655432 6788999999999988643 458
Q ss_pred CcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cC-CCeEEEEcccccccc
Q 028043 152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SS-LKRIVLVSSVGVTKF 208 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~-~~~iV~vSS~~~~~~ 208 (214)
+|+||||||...... ...+++...+++|+.|+.++++++. .+ .++||++||.+++.+
T Consensus 87 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 152 (263)
T 3ak4_A 87 FDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVG 152 (263)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC
T ss_pred CCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccC
Confidence 999999999864221 1222345677999999999998762 23 589999999987653
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.86 E-value=6e-22 Score=165.20 Aligned_cols=131 Identities=15% Similarity=0.168 Sum_probs=101.5
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhH-------HHHHhcccC--CCCEEEEEecCCChhccchhh
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-------ATTLFGKQD--EETLQVCKGDTRNPKDLDPAI 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~-------~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~ 148 (214)
+++++|+++||||+||||++++++|+++|++|++++|+.++ +++..+++. +.++.++++|++|++++++++
T Consensus 5 m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~ 84 (285)
T 3sc4_A 5 MSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAV 84 (285)
T ss_dssp -CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence 56789999999999999999999999999999999998763 333222221 457889999999999988743
Q ss_pred ------hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhcc-----CCCeEEEEcccccccc
Q 028043 149 ------FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS-----SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 ------~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~-----~~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||...... ...++.++.+++|+.|++++++++.+ +.++||++||.+++.+
T Consensus 85 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~ 158 (285)
T 3sc4_A 85 AKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEP 158 (285)
T ss_dssp HHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSG
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccC
Confidence 468999999999875322 12233456678999999999998732 4579999999887654
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=9.2e-22 Score=162.35 Aligned_cols=127 Identities=16% Similarity=0.173 Sum_probs=103.2
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
.+++|+++||||+||||++++++|+++|++|++++|++++++++.+++. .++.++.+|++|++++++++ ++++
T Consensus 3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 81 (263)
T 2a4k_A 3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE-AEAIAVVADVSDPKAVEAVFAEALEEFGRL 81 (263)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCC-SSEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-CceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 3578999999999999999999999999999999999988887766553 56888999999999887643 4689
Q ss_pred cEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEcccccc
Q 028043 153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVT 206 (214)
Q Consensus 153 d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~ 206 (214)
|+||||||...... ...++.++.+++|+.|+.++++++.+ ..++||++||.+++
T Consensus 82 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~ 141 (263)
T 2a4k_A 82 HGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL 141 (263)
T ss_dssp CEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC
T ss_pred cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc
Confidence 99999999865321 11223356778999999999998733 24799999999876
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=2.6e-22 Score=165.54 Aligned_cols=114 Identities=19% Similarity=0.206 Sum_probs=98.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
++|+|+||||+||||++++++|+++|++|++++|++.+.. ..+++++.+|++|++++++ ++.++|+||||||
T Consensus 2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~-------~~~~~~~~~Dl~d~~~~~~-~~~~~D~vi~~Ag 73 (267)
T 3rft_A 2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA-------GPNEECVQCDLADANAVNA-MVAGCDGIVHLGG 73 (267)
T ss_dssp CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC-------CTTEEEEECCTTCHHHHHH-HHTTCSEEEECCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc-------CCCCEEEEcCCCCHHHHHH-HHcCCCEEEECCC
Confidence 4689999999999999999999999999999999875432 4578999999999999997 4789999999999
Q ss_pred CCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccccccc
Q 028043 161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 161 ~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~ 207 (214)
... .+.....+++|+.|+.+++++++ .+.++||++||.++++
T Consensus 74 ~~~-----~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g 116 (267)
T 3rft_A 74 ISV-----EKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIG 116 (267)
T ss_dssp CCS-----CCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGT
T ss_pred CcC-----cCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhC
Confidence 842 23446678999999999999984 5778999999999885
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=6.9e-22 Score=161.90 Aligned_cols=129 Identities=19% Similarity=0.137 Sum_probs=103.0
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
.+++|+++||||+||||++++++|+++|++|++++|++++++++.+++ +.++.++++|++|++++++++ ++++
T Consensus 3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 81 (253)
T 1hxh_A 3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-GERSMFVRHDVSSEADWTLVMAAVQRRLGTL 81 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-CTTEEEECCCTTCHHHHHHHHHHHHHHHCSC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-CCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 357899999999999999999999999999999999998887766555 456888999999999887643 4689
Q ss_pred cEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh----ccCCCeEEEEcccccccc
Q 028043 153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 153 d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~----~~~~~~iV~vSS~~~~~~ 208 (214)
|+||||||...... ...+++...+++|+.|++++++++ ++..++||++||.+++.+
T Consensus 82 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 144 (253)
T 1hxh_A 82 NVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLP 144 (253)
T ss_dssp CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSC
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcCCEEEEEcchhhcCC
Confidence 99999999864321 122334567799999998888765 322289999999988654
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.86 E-value=3.9e-22 Score=164.38 Aligned_cols=128 Identities=17% Similarity=0.062 Sum_probs=98.7
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
+++++|+++||||+||||++++++|+++|++|++++|++++..+.... .++.++.+|++|++++++++ +++
T Consensus 23 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 99 (260)
T 3gem_A 23 MTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQ---AGAVALYGDFSCETGIMAFIDLLKTQTSS 99 (260)
T ss_dssp ----CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHH---HTCEEEECCTTSHHHHHHHHHHHHHHCSC
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHh---cCCeEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 567889999999999999999999999999999999998765443322 23788999999999888643 468
Q ss_pred CcEEEeccCCCCCCC--CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 152 VTHVICCTGTTAFPS--RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~--~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
+|+||||||...... ...+++...+++|+.|+.++++++ +.+.++||++||.+++.+
T Consensus 100 iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~ 163 (260)
T 3gem_A 100 LRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKG 163 (260)
T ss_dssp CSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTC
T ss_pred CCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCC
Confidence 999999999865322 111223457799999999999976 235589999999988654
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=4.6e-22 Score=165.21 Aligned_cols=131 Identities=17% Similarity=0.196 Sum_probs=105.2
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC---CCCEEEEEecCCChhccchhh------
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
..+++|+++||||+||||++++++|+++|++|++++|+.++.++..+++. +.++.++++|++|++++++++
T Consensus 23 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 102 (277)
T 4fc7_A 23 DLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKE 102 (277)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 44688999999999999999999999999999999999887766544431 457889999999999888643
Q ss_pred hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccccc
Q 028043 149 FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||...... ...+++...+++|+.|++++++++. .+.++||++||.+++.+
T Consensus 103 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~ 170 (277)
T 4fc7_A 103 FGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRG 170 (277)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHT
T ss_pred cCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCC
Confidence 468999999999764221 2333456678999999999999762 24579999999987643
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.86 E-value=5.4e-22 Score=164.65 Aligned_cols=129 Identities=17% Similarity=0.158 Sum_probs=103.3
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
.+.+|+++||||+||||++++++|+++|++|++++|+.++++++.+++. .++.++.+|++|++++++++ ++++
T Consensus 25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 103 (272)
T 4dyv_A 25 KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIG-DDALCVPTDVTDPDSVRALFTATVEKFGRV 103 (272)
T ss_dssp ---CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHT-SCCEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC-CCeEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 4578999999999999999999999999999999999998888766653 56889999999999988743 4689
Q ss_pred cEEEeccCCCCCCC----CCCCCCCchhHHHHHHHHHHHHHhc-----cC--CCeEEEEcccccccc
Q 028043 153 THVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSALP-----SS--LKRIVLVSSVGVTKF 208 (214)
Q Consensus 153 d~li~~Ag~~~~~~----~~~~~~~~~~~vNv~g~~~l~~a~~-----~~--~~~iV~vSS~~~~~~ 208 (214)
|+||||||...... ...+++++.+++|+.|++++++++. .+ .++||++||.+++.+
T Consensus 104 D~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~ 170 (272)
T 4dyv_A 104 DVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSP 170 (272)
T ss_dssp CEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSC
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCC
Confidence 99999999864211 2233446678999999999998762 22 469999999988654
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.86 E-value=9.8e-22 Score=161.52 Aligned_cols=130 Identities=18% Similarity=0.199 Sum_probs=103.0
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC----CCCEEEEEecCCChhccchhh-----
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAI----- 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~v~~Di~d~~~v~~~~----- 148 (214)
+.+++|+++||||+||||++++++|+++|++|++++|++++++++.+++. +.++.++.+|++|++++++++
T Consensus 3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (260)
T 2z1n_A 3 LGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARD 82 (260)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 34678999999999999999999999999999999999987776554432 226889999999999988743
Q ss_pred -hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 149 -FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 -~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
++ +|+||||||...... ...+++...+++|+.|+.++++++ +.+.++||++||.+++.+
T Consensus 83 ~~g-id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 150 (260)
T 2z1n_A 83 LGG-ADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRP 150 (260)
T ss_dssp TTC-CSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC
T ss_pred hcC-CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCC
Confidence 24 999999999764221 222344667899999998888866 235689999999988654
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=7.1e-22 Score=162.25 Aligned_cols=131 Identities=15% Similarity=0.160 Sum_probs=103.5
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
..+++|+++||||+||||++++++|+++|++|++++|+++++++..+++. +.++.++.+|++|++++++++ +
T Consensus 10 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 89 (260)
T 2zat_A 10 KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLH 89 (260)
T ss_dssp CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 44678999999999999999999999999999999999887766544332 346888999999999887633 4
Q ss_pred CCCcEEEeccCCCCC--C--CCCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 150 EGVTHVICCTGTTAF--P--SRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~--~--~~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
+++|+||||||.... + ....+++...+++|+.|+.++++++ +.+.++||++||.+++.+
T Consensus 90 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 157 (260)
T 2zat_A 90 GGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHP 157 (260)
T ss_dssp SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSC
T ss_pred CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCC
Confidence 689999999997531 1 1222234567899999999999876 235679999999988754
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.86 E-value=9.4e-22 Score=165.30 Aligned_cols=130 Identities=16% Similarity=0.111 Sum_probs=105.7
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
.+++|+++||||+||||++++++|+++|++|++++|+.++++++.+++. +.++.++.+|++|.+++++++ ++
T Consensus 28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 107 (301)
T 3tjr_A 28 GFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLG 107 (301)
T ss_dssp CSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCC
Confidence 3678999999999999999999999999999999999988877655443 457889999999999988643 46
Q ss_pred CCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cC-CCeEEEEcccccccc
Q 028043 151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SS-LKRIVLVSSVGVTKF 208 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~-~~~iV~vSS~~~~~~ 208 (214)
++|+||||||+..... ...++..+.+++|+.|+.++++++. .+ .++||++||.+++.+
T Consensus 108 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~ 174 (301)
T 3tjr_A 108 GVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVP 174 (301)
T ss_dssp SCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSC
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCC
Confidence 8999999999875321 2233446678999999999999762 23 579999999988654
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.2e-21 Score=160.13 Aligned_cols=129 Identities=14% Similarity=0.185 Sum_probs=101.9
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh-hHHHHHhcccCCCCEEEEEecCCChhccchhh------hCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP-EKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
.+++|+++||||+||||++++++|+++|++|++++|++ +++++..+.. +.++.++++|++|++++++++ +++
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 82 (249)
T 2ew8_A 4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNL-GRRVLTVKCDVSQPGDVEAFGKQVISTFGR 82 (249)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHT-TCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhc-CCcEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence 35789999999999999999999999999999999998 6665422222 356888999999999988643 578
Q ss_pred CcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh----c-cCCCeEEEEcccccccc
Q 028043 152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~----~-~~~~~iV~vSS~~~~~~ 208 (214)
+|+||||||...... ...++....+++|+.|+.++++++ + .+.++||++||.+++.+
T Consensus 83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 147 (249)
T 2ew8_A 83 CDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLK 147 (249)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSC
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccC
Confidence 999999999864321 222334567899999999998875 2 35689999999988654
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=99.86 E-value=8.9e-22 Score=166.82 Aligned_cols=132 Identities=18% Similarity=0.194 Sum_probs=105.3
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--C--CCEEEEEecCCChhccchhh-----
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--E--ETLQVCKGDTRNPKDLDPAI----- 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~--~~~~~v~~Di~d~~~v~~~~----- 148 (214)
+++++|+|+||||+||||++++++|+++|++|++++|+.++++++.+.+. + ..+.++.+|++|++++++++
T Consensus 4 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 83 (319)
T 3ioy_A 4 KDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEA 83 (319)
T ss_dssp CCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 34678999999999999999999999999999999999988777654432 2 26889999999999888743
Q ss_pred -hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhcc-----------CCCeEEEEccccccccC
Q 028043 149 -FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS-----------SLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 149 -~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~-----------~~~~iV~vSS~~~~~~~ 209 (214)
++++|+||||||+..... ...++....+++|+.|+.++++++.+ +.++||++||.+++.+.
T Consensus 84 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~ 159 (319)
T 3ioy_A 84 RFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAA 159 (319)
T ss_dssp HTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCC
T ss_pred hCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCC
Confidence 468999999999865322 22234456789999999999987621 35689999999887643
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.86 E-value=6e-22 Score=163.59 Aligned_cols=131 Identities=16% Similarity=0.128 Sum_probs=104.0
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC----CCCEEEEEecCCChhccchhh--hCC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAI--FEG 151 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~v~~Di~d~~~v~~~~--~~~ 151 (214)
+.+++|+++||||+||||++++++|+++|++|++++|+++.+++..+++. +..+..+.+|++|++++++.+ +++
T Consensus 6 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~ 85 (267)
T 3t4x_A 6 MQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPK 85 (267)
T ss_dssp CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCC
T ss_pred cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCC
Confidence 45678999999999999999999999999999999999988766544432 345778999999999887643 568
Q ss_pred CcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccccc
Q 028043 152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~ 208 (214)
+|+||||||...... ...+++++.+++|+.|++++++++. .+.++||++||.+++.+
T Consensus 86 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 150 (267)
T 3t4x_A 86 VDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMP 150 (267)
T ss_dssp CSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSC
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccC
Confidence 999999999875322 1223345567999999999888762 35579999999988654
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.86 E-value=1.3e-21 Score=162.48 Aligned_cols=130 Identities=20% Similarity=0.167 Sum_probs=103.2
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcC------------hhHHHHHhcccC--CCCEEEEEecCCChhc
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD------------PEKATTLFGKQD--EETLQVCKGDTRNPKD 143 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~------------~~~~~~~~~~~~--~~~~~~v~~Di~d~~~ 143 (214)
..+++|+++||||+||||++++++|+++|++|++++|+ .+.+++...++. +.++.++.+|++|+++
T Consensus 6 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 85 (287)
T 3pxx_A 6 GRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAA 85 (287)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHH
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHH
Confidence 45789999999999999999999999999999999997 555544433221 4578899999999999
Q ss_pred cchhh------hCCCcEEEeccCCCCCCC-CCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEccccccc
Q 028043 144 LDPAI------FEGVTHVICCTGTTAFPS-RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTK 207 (214)
Q Consensus 144 v~~~~------~~~~d~li~~Ag~~~~~~-~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~ 207 (214)
+++++ ++++|+||||||...... ...+++...+++|+.|++++++++.+ ..++||++||.+++.
T Consensus 86 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~ 159 (287)
T 3pxx_A 86 VSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLI 159 (287)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHH
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcc
Confidence 87643 468999999999875321 22334567789999999999998843 346999999988764
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=4.5e-22 Score=163.53 Aligned_cols=129 Identities=11% Similarity=0.049 Sum_probs=102.5
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhH-HHHHhcccC---CCCEEEEEecCCChhccchhh------h
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-ATTLFGKQD---EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~-~~~~~~~~~---~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
+++|+++||||+||||++++++|+++|++|++++|++++ ++++.+++. +.++.++.+|++|++++++++ +
T Consensus 2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 81 (260)
T 1x1t_A 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM 81 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 468999999999999999999999999999999999877 665544332 346888999999999887643 4
Q ss_pred CCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccccc
Q 028043 150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~ 208 (214)
+++|+||||||...... ...++++..+++|+.|++++++++. .+.++||++||.+++.+
T Consensus 82 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 148 (260)
T 1x1t_A 82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVA 148 (260)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcC
Confidence 68999999999864221 2223346678999999999998762 35689999999988654
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=1.1e-21 Score=160.88 Aligned_cols=126 Identities=18% Similarity=0.108 Sum_probs=100.1
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
.+++|+++||||+||||++++++|+++|++|++++|++++ ++..+.+. . .++++|++|++++++++ ++++
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~--~-~~~~~D~~~~~~~~~~~~~~~~~~g~i 78 (256)
T 2d1y_A 3 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG--G-AFFQVDLEDERERVRFVEEAAYALGRV 78 (256)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT--C-EEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh--C-CEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence 4578999999999999999999999999999999999877 55544443 3 78899999999887643 4689
Q ss_pred cEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccccc
Q 028043 153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 153 d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~ 208 (214)
|+||||||...... ...++..+.+++|+.|+.++++++. .+.++||++||.+++.+
T Consensus 79 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~ 142 (256)
T 2d1y_A 79 DVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFA 142 (256)
T ss_dssp CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSB
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCC
Confidence 99999999865321 1122335678999999999998762 35679999999987643
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=1.4e-21 Score=159.43 Aligned_cols=127 Identities=15% Similarity=0.123 Sum_probs=102.6
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh--hCCCcEEE
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--FEGVTHVI 156 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~--~~~~d~li 156 (214)
.+++|+++||||+||||++++++|+++|++|++++|++++++++. ++ .++.++.+|++|++++++.. ++++|+||
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~--~~~~~~~~D~~~~~~~~~~~~~~~~id~lv 79 (246)
T 2ag5_A 3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KY--PGIQTRVLDVTKKKQIDQFANEVERLDVLF 79 (246)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GS--TTEEEEECCTTCHHHHHHHHHHCSCCSEEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hc--cCceEEEeeCCCHHHHHHHHHHhCCCCEEE
Confidence 357899999999999999999999999999999999998877665 33 26888999999999887532 57899999
Q ss_pred eccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccccc
Q 028043 157 CCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 157 ~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~ 208 (214)
||||...... ...++++..+++|+.|+.++++++. .+.++||++||.+++.+
T Consensus 80 ~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 139 (246)
T 2ag5_A 80 NVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVK 139 (246)
T ss_dssp ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTB
T ss_pred ECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcC
Confidence 9999865321 1223345667899999999999762 35689999999987654
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.86 E-value=1.3e-21 Score=162.36 Aligned_cols=131 Identities=15% Similarity=0.169 Sum_probs=103.5
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEc-------------ChhHHHHHhcccC--CCCEEEEEecCCChh
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-------------DPEKATTLFGKQD--EETLQVCKGDTRNPK 142 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r-------------~~~~~~~~~~~~~--~~~~~~v~~Di~d~~ 142 (214)
..+++|+++||||+||||++++++|+++|++|++++| +.+.+++..+.+. +.++.++.+|++|++
T Consensus 7 ~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 86 (277)
T 3tsc_A 7 GKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFD 86 (277)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred cccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHH
Confidence 3467899999999999999999999999999999998 5666655444332 457889999999999
Q ss_pred ccchhh------hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cC-CCeEEEEccccccc
Q 028043 143 DLDPAI------FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SS-LKRIVLVSSVGVTK 207 (214)
Q Consensus 143 ~v~~~~------~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~-~~~iV~vSS~~~~~ 207 (214)
++++++ ++++|+||||||...... ...+++++.+++|+.|++++++++. .+ .++||++||.+++.
T Consensus 87 ~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~ 166 (277)
T 3tsc_A 87 RLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMK 166 (277)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCC
Confidence 988743 468999999999875322 2233456678999999999999762 22 46999999998865
Q ss_pred c
Q 028043 208 F 208 (214)
Q Consensus 208 ~ 208 (214)
+
T Consensus 167 ~ 167 (277)
T 3tsc_A 167 M 167 (277)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.86 E-value=5.9e-22 Score=162.29 Aligned_cols=129 Identities=15% Similarity=0.146 Sum_probs=99.6
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC-----CCCEEEEEecCCChhccchhh-----
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-----EETLQVCKGDTRNPKDLDPAI----- 148 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~v~~Di~d~~~v~~~~----- 148 (214)
.+++|+++||||+||||++++++|+++|++|++++|++++++++.+++. ..++.++.+|++|++++++++
T Consensus 4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 83 (250)
T 3nyw_A 4 EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQ 83 (250)
T ss_dssp -CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHH
Confidence 4578999999999999999999999999999999999988777654431 256889999999999888643
Q ss_pred -hCCCcEEEeccCCCCCCCC--CCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEccccccc
Q 028043 149 -FEGVTHVICCTGTTAFPSR--RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTK 207 (214)
Q Consensus 149 -~~~~d~li~~Ag~~~~~~~--~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~ 207 (214)
++++|+||||||....... ..+++...+++|+.|++++++++ +.+.++||++||.+++.
T Consensus 84 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~ 150 (250)
T 3nyw_A 84 KYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKY 150 (250)
T ss_dssp HHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-----
T ss_pred hcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcC
Confidence 4689999999998653211 12234567799999999999976 23567999999998765
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=7e-22 Score=162.64 Aligned_cols=130 Identities=18% Similarity=0.171 Sum_probs=103.2
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
.+++|+++||||+||||++++++|+++|++|++++|++++++++.+++. +.++.++.+|++|++++++++ ++
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 83 (262)
T 1zem_A 4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG 83 (262)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 3578999999999999999999999999999999999888776554432 346888999999999887633 46
Q ss_pred CCcEEEeccCCC-CCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccccc
Q 028043 151 GVTHVICCTGTT-AFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 151 ~~d~li~~Ag~~-~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~ 208 (214)
++|+||||||.. .... ...+++...+++|+.|++++++++. ++.++||++||.+++.+
T Consensus 84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 150 (262)
T 1zem_A 84 KIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKG 150 (262)
T ss_dssp CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSC
T ss_pred CCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccC
Confidence 899999999976 2111 2223346678999999999998762 35679999999887653
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=2.7e-21 Score=159.68 Aligned_cols=132 Identities=11% Similarity=0.161 Sum_probs=104.6
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCC-CCEEEEEecCCChhccchhh------hC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDE-ETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
+.+++|+++||||+||||++++++|+++|++|++++|+.+..+++.+++.. .++.++.+|++|++++++++ ++
T Consensus 12 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 91 (278)
T 2bgk_A 12 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHG 91 (278)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 456789999999999999999999999999999999998777665544432 26889999999999988643 35
Q ss_pred CCcEEEeccCCCCCCC-----CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEccccccccC
Q 028043 151 GVTHVICCTGTTAFPS-----RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~-----~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~~ 209 (214)
++|+||||||...... ...++..+.+++|+.|+.++++++. .+.++||++||.+++.+.
T Consensus 92 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~ 160 (278)
T 2bgk_A 92 KLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAG 160 (278)
T ss_dssp CCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCC
T ss_pred CCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCC
Confidence 8999999999864211 1112335577999999999998762 356799999999887653
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=99.86 E-value=1.3e-21 Score=160.96 Aligned_cols=131 Identities=10% Similarity=0.033 Sum_probs=102.5
Q ss_pred CCCCCCEEEEEcCch--HHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcc---cCCCCEEEEEecCCChhccchhh----
Q 028043 78 PASSSKLVLVAGGSG--GVGQLVVASLLSRNIKSRLLLRDPEKATTLFGK---QDEETLQVCKGDTRNPKDLDPAI---- 148 (214)
Q Consensus 78 ~~~~~k~vlITGasg--gIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~v~~Di~d~~~v~~~~---- 148 (214)
++++||+++||||+| |||+++|++|+++|++|++++|+++.++++.+. ..+.++.++++|++|++++++.+
T Consensus 2 ~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 81 (256)
T 4fs3_A 2 LNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIG 81 (256)
T ss_dssp CCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 568899999999876 999999999999999999999998777665443 33457889999999999987643
Q ss_pred --hCCCcEEEeccCCCCCCC-------CCCCCCCchhHHHHHHHHHHHHHhc---cCCCeEEEEcccccccc
Q 028043 149 --FEGVTHVICCTGTTAFPS-------RRWDGDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 --~~~~d~li~~Ag~~~~~~-------~~~~~~~~~~~vNv~g~~~l~~a~~---~~~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||...... ..++++...+++|+.++..+++++. +..++||++||.++..+
T Consensus 82 ~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~ 153 (256)
T 4fs3_A 82 KDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFA 153 (256)
T ss_dssp HHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSC
T ss_pred HHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccC
Confidence 679999999999864211 1112233456889999998888763 23479999999987654
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.9e-21 Score=158.52 Aligned_cols=130 Identities=13% Similarity=0.111 Sum_probs=103.1
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCE-EEEEecCCChhccchhh-----hCC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETL-QVCKGDTRNPKDLDPAI-----FEG 151 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~v~~Di~d~~~v~~~~-----~~~ 151 (214)
+++++|+++||||+||||++++++|+++|++|++++|++++++++.+++ +.++ .++.+|++|++++++++ +++
T Consensus 7 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 85 (254)
T 2wsb_A 7 FRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL-GAAVAARIVADVTDAEAMTAAAAEAEAVAP 85 (254)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-GGGEEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-cccceeEEEEecCCHHHHHHHHHHHHhhCC
Confidence 4567899999999999999999999999999999999998877665544 2356 78999999999988643 368
Q ss_pred CcEEEeccCCCCCCCC---CCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 152 VTHVICCTGTTAFPSR---RWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~~---~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
+|+||||||....... ..++..+.+++|+.|+.++++++ +.+.++||++||.+++..
T Consensus 86 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~ 150 (254)
T 2wsb_A 86 VSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIV 150 (254)
T ss_dssp CCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC
T ss_pred CcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccC
Confidence 9999999998653221 11223556789999998888865 235789999999987654
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.1e-21 Score=162.75 Aligned_cols=131 Identities=12% Similarity=0.112 Sum_probs=101.7
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhH-------HHHHhcccC--CCCEEEEEecCCChhccchhh
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-------ATTLFGKQD--EETLQVCKGDTRNPKDLDPAI 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~-------~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~ 148 (214)
+++++|+++||||+||||++++++|+++|++|++++|+.++ +++..+.+. +.++.++.+|++|++++++++
T Consensus 2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~ 81 (274)
T 3e03_A 2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAV 81 (274)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHH
T ss_pred CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence 45789999999999999999999999999999999998653 222222211 456889999999999988643
Q ss_pred ------hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh----c-cCCCeEEEEcccccccc
Q 028043 149 ------FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 ------~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~----~-~~~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||...... ...++.++.+++|+.|++++++++ + .+.++||++||.+++.+
T Consensus 82 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~ 155 (274)
T 3e03_A 82 AATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNP 155 (274)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCH
T ss_pred HHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCC
Confidence 468999999999875322 222334567799999999999976 2 35579999999887643
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.6e-21 Score=162.33 Aligned_cols=131 Identities=18% Similarity=0.157 Sum_probs=103.4
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcC----------------hhHHHHHhcccC--CCCEEEEEecCC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD----------------PEKATTLFGKQD--EETLQVCKGDTR 139 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~----------------~~~~~~~~~~~~--~~~~~~v~~Di~ 139 (214)
..+++|+++||||+||||++++++|+++|++|++++|+ .++++++.+.+. +.++.++.+|++
T Consensus 7 ~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~ 86 (286)
T 3uve_A 7 GRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVR 86 (286)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCC
Confidence 34678999999999999999999999999999999987 556655544332 457889999999
Q ss_pred Chhccchhh------hCCCcEEEeccCCCCCCC----CCCCCCCchhHHHHHHHHHHHHHhc-----cC-CCeEEEEccc
Q 028043 140 NPKDLDPAI------FEGVTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSALP-----SS-LKRIVLVSSV 203 (214)
Q Consensus 140 d~~~v~~~~------~~~~d~li~~Ag~~~~~~----~~~~~~~~~~~vNv~g~~~l~~a~~-----~~-~~~iV~vSS~ 203 (214)
|++++++++ ++++|+||||||+..... ...+++...+++|+.|++++++++. .+ .++||++||.
T Consensus 87 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~ 166 (286)
T 3uve_A 87 DYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSV 166 (286)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCG
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECch
Confidence 999988743 568999999999865321 1223446678999999999999762 12 4699999999
Q ss_pred ccccc
Q 028043 204 GVTKF 208 (214)
Q Consensus 204 ~~~~~ 208 (214)
+++.+
T Consensus 167 ~~~~~ 171 (286)
T 3uve_A 167 GGLKA 171 (286)
T ss_dssp GGTSC
T ss_pred hhccC
Confidence 88654
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.86 E-value=9.1e-22 Score=164.51 Aligned_cols=131 Identities=24% Similarity=0.332 Sum_probs=100.0
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC---CCCEEEEEecCCCh-hccchhh-----
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNP-KDLDPAI----- 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~v~~Di~d~-~~v~~~~----- 148 (214)
.++++|+++||||+||||++++++|+++|++|++++|+.++.++..+++. +.++.++.+|++|+ +++++++
T Consensus 8 ~~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~ 87 (311)
T 3o26_A 8 TVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKT 87 (311)
T ss_dssp ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred ccCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHH
Confidence 34578999999999999999999999999999999999988766544432 34689999999998 7766532
Q ss_pred -hCCCcEEEeccCCCCCC---------------------------------CCCCCCCCchhHHHHHHHHHHHHHh----
Q 028043 149 -FEGVTHVICCTGTTAFP---------------------------------SRRWDGDNTPEKVDWEGVRNLVSAL---- 190 (214)
Q Consensus 149 -~~~~d~li~~Ag~~~~~---------------------------------~~~~~~~~~~~~vNv~g~~~l~~a~---- 190 (214)
++++|+||||||+.... ....+..++.+++|+.|++++++++
T Consensus 88 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l 167 (311)
T 3o26_A 88 HFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLL 167 (311)
T ss_dssp HHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred hCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhh
Confidence 46899999999987421 0111223456899999999999876
Q ss_pred c-cCCCeEEEEcccccccc
Q 028043 191 P-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 191 ~-~~~~~iV~vSS~~~~~~ 208 (214)
+ .+.++||++||.+++..
T Consensus 168 ~~~~~~~IV~isS~~~~~~ 186 (311)
T 3o26_A 168 QLSDSPRIVNVSSSTGSLK 186 (311)
T ss_dssp TTSSSCEEEEECCGGGSGG
T ss_pred ccCCCCeEEEEecCCcccc
Confidence 2 35579999999987643
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=4.5e-21 Score=159.60 Aligned_cols=129 Identities=20% Similarity=0.220 Sum_probs=103.7
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
.+++|+++||||+||||++++++|+++|++|++++|+.++++++.+.. +.++.++.+|++|++++++++ ++++
T Consensus 2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 80 (281)
T 3zv4_A 2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH-GGNAVGVVGDVRSLQDQKRAAERCLAAFGKI 80 (281)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-BTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc-CCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 467899999999999999999999999999999999999888776554 457889999999999887643 5689
Q ss_pred cEEEeccCCCCCCC----CCCC----CCCchhHHHHHHHHHHHHHhc----cCCCeEEEEcccccccc
Q 028043 153 THVICCTGTTAFPS----RRWD----GDNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 153 d~li~~Ag~~~~~~----~~~~----~~~~~~~vNv~g~~~l~~a~~----~~~~~iV~vSS~~~~~~ 208 (214)
|+||||||+..... ...+ .++..+++|+.|++++++++. +..++||++||.+++.+
T Consensus 81 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 148 (281)
T 3zv4_A 81 DTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYP 148 (281)
T ss_dssp CEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSS
T ss_pred CEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccC
Confidence 99999999864211 1111 134567899999999999772 23479999999988654
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.9e-21 Score=157.03 Aligned_cols=126 Identities=18% Similarity=0.209 Sum_probs=100.6
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCCcE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVTH 154 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~d~ 154 (214)
++|+++||||+||||++++++|+++|++|++++|++++++++.+++. ++.++.+|++|++++++++ ++++|+
T Consensus 4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 81 (234)
T 2ehd_A 4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE--GALPLPGDVREEGDWARAVAAMEEAFGELSA 81 (234)
T ss_dssp CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST--TCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh--hceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 46899999999999999999999999999999999988777655443 5788999999999887643 468999
Q ss_pred EEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 155 VICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 155 li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
||||||...... ...++....+++|+.|+.++++++ +.+.++||++||.+++.+
T Consensus 82 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~ 143 (234)
T 2ehd_A 82 LVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNP 143 (234)
T ss_dssp EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSC
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCC
Confidence 999999764211 122334567799999998777754 235689999999988654
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.86 E-value=2.3e-21 Score=162.69 Aligned_cols=131 Identities=13% Similarity=0.111 Sum_probs=103.2
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcC------------hhHHHHHhcccC--CCCEEEEEecCCChhc
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD------------PEKATTLFGKQD--EETLQVCKGDTRNPKD 143 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~------------~~~~~~~~~~~~--~~~~~~v~~Di~d~~~ 143 (214)
..+++|+++||||+||||++++++|+++|++|++++|+ .+.+++..+++. +.++.++.+|++|+++
T Consensus 24 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 103 (299)
T 3t7c_A 24 GKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDA 103 (299)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred cccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHH
Confidence 34678999999999999999999999999999999987 555555443332 4578899999999999
Q ss_pred cchhh------hCCCcEEEeccCCCCCCC----CCCCCCCchhHHHHHHHHHHHHHhc-----c-CCCeEEEEccccccc
Q 028043 144 LDPAI------FEGVTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSALP-----S-SLKRIVLVSSVGVTK 207 (214)
Q Consensus 144 v~~~~------~~~~d~li~~Ag~~~~~~----~~~~~~~~~~~vNv~g~~~l~~a~~-----~-~~~~iV~vSS~~~~~ 207 (214)
+++++ ++++|+||||||...... ...+++...+++|+.|++++++++. . ..++||++||.+++.
T Consensus 104 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~ 183 (299)
T 3t7c_A 104 MQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLR 183 (299)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTS
T ss_pred HHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhcc
Confidence 88743 468999999999865321 1223346678999999999999762 2 357999999998865
Q ss_pred c
Q 028043 208 F 208 (214)
Q Consensus 208 ~ 208 (214)
+
T Consensus 184 ~ 184 (299)
T 3t7c_A 184 G 184 (299)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=1.4e-21 Score=161.66 Aligned_cols=131 Identities=15% Similarity=0.104 Sum_probs=102.9
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
+.+++|+++||||+||||++++++|+++|++|++++|+++..+++.+++. +.++.++.+|++|++++++++ +
T Consensus 27 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 106 (272)
T 1yb1_A 27 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI 106 (272)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence 55788999999999999999999999999999999999887766544332 346889999999999887643 4
Q ss_pred CCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
+++|+||||||...... ...++....+++|+.|+.++++++ +.+.++||++||.+++.+
T Consensus 107 g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~ 173 (272)
T 1yb1_A 107 GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVS 173 (272)
T ss_dssp CCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCC
T ss_pred CCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCC
Confidence 58999999999865221 111233567799999999988866 235679999999987643
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=1.2e-21 Score=164.48 Aligned_cols=131 Identities=15% Similarity=0.177 Sum_probs=103.0
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CC---CEEEEEecCCChhccchhh----
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EE---TLQVCKGDTRNPKDLDPAI---- 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~---~~~~v~~Di~d~~~v~~~~---- 148 (214)
+.+++|+++||||+||||++++++|+++|++|++++|++++++++.+++. +. ++.++.+|++|++++++++
T Consensus 22 ~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 101 (297)
T 1xhl_A 22 ARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTL 101 (297)
T ss_dssp -CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHH
Confidence 34678999999999999999999999999999999999988776544432 22 6889999999999888643
Q ss_pred --hCCCcEEEeccCCCCCCC-----CCCCCCCchhHHHHHHHHHHHHHhc----cCCCeEEEEcccccccc
Q 028043 149 --FEGVTHVICCTGTTAFPS-----RRWDGDNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 --~~~~d~li~~Ag~~~~~~-----~~~~~~~~~~~vNv~g~~~l~~a~~----~~~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||...... ...+++...+++|+.|+.++++++. +..++||++||.+++.+
T Consensus 102 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~IV~isS~~~~~~ 172 (297)
T 1xhl_A 102 AKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQ 172 (297)
T ss_dssp HHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSS
T ss_pred HhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCEEEEEcCchhccC
Confidence 468999999999764221 1223345678999999999998762 22289999999987654
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=1.2e-21 Score=162.75 Aligned_cols=130 Identities=18% Similarity=0.173 Sum_probs=102.6
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CC---CEEEEEecCCChhccchhh-----
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EE---TLQVCKGDTRNPKDLDPAI----- 148 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~---~~~~v~~Di~d~~~v~~~~----- 148 (214)
.+++|+++||||+||||++++++|+++|++|++++|++++++++.+++. +. ++.++.+|++|++++++++
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (280)
T 1xkq_A 3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK 82 (280)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHH
Confidence 3578999999999999999999999999999999999988776554432 22 6889999999999887643
Q ss_pred -hCCCcEEEeccCCCCCCC-------CCCCCCCchhHHHHHHHHHHHHHhcc----CCCeEEEEcccccccc
Q 028043 149 -FEGVTHVICCTGTTAFPS-------RRWDGDNTPEKVDWEGVRNLVSALPS----SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 -~~~~d~li~~Ag~~~~~~-------~~~~~~~~~~~vNv~g~~~l~~a~~~----~~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||...... ...+++...+++|+.|+.++++++.+ ..++||++||.+++..
T Consensus 83 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 154 (280)
T 1xkq_A 83 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQ 154 (280)
T ss_dssp HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSS
T ss_pred hcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCCCcEEEecCccccCC
Confidence 468999999999864211 12223456779999999999997732 1289999999987654
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.86 E-value=9.9e-22 Score=164.29 Aligned_cols=129 Identities=20% Similarity=0.234 Sum_probs=104.4
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC---eEEEEEcChhHHHHHhcccC----CCCEEEEEecCCChhccchhh----
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI---KSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAI---- 148 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~---~V~~~~r~~~~~~~~~~~~~----~~~~~~v~~Di~d~~~v~~~~---- 148 (214)
+++|+++||||+||||++++++|+++|+ +|++++|+.++++++.+++. +.++.++.+|++|++++++++
T Consensus 31 l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 110 (287)
T 3rku_A 31 LAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLP 110 (287)
T ss_dssp HTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSC
T ss_pred cCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 4689999999999999999999999998 99999999988877655432 456889999999999988743
Q ss_pred --hCCCcEEEeccCCCCCCC----CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 149 --FEGVTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 --~~~~d~li~~Ag~~~~~~----~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||...... ...+++++.+++|+.|++++++++ +.+.++||++||.+++.+
T Consensus 111 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~ 181 (287)
T 3rku_A 111 QEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDA 181 (287)
T ss_dssp GGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC
T ss_pred HhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCC
Confidence 468999999999764211 222344667899999999999976 236689999999988654
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.3e-21 Score=161.82 Aligned_cols=130 Identities=14% Similarity=0.114 Sum_probs=99.6
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEc-ChhHHHHHhcccC---CCCEEEEEecCCCh----hccchhh--
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-DPEKATTLFGKQD---EETLQVCKGDTRNP----KDLDPAI-- 148 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r-~~~~~~~~~~~~~---~~~~~~v~~Di~d~----~~v~~~~-- 148 (214)
.+++|+++||||+||||++++++|+++|++|++++| ++++++++.+++. +.++.++.+|++|+ +++++++
T Consensus 8 ~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 87 (276)
T 1mxh_A 8 ASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDC 87 (276)
T ss_dssp ---CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHH
Confidence 356899999999999999999999999999999999 8887776654432 35688999999999 7776532
Q ss_pred ----hCCCcEEEeccCCCCCCC---CCC-----------CCCCchhHHHHHHHHHHHHHhcc----CC------CeEEEE
Q 028043 149 ----FEGVTHVICCTGTTAFPS---RRW-----------DGDNTPEKVDWEGVRNLVSALPS----SL------KRIVLV 200 (214)
Q Consensus 149 ----~~~~d~li~~Ag~~~~~~---~~~-----------~~~~~~~~vNv~g~~~l~~a~~~----~~------~~iV~v 200 (214)
++++|+||||||...... ... ++....+++|+.|++++++++.+ +. ++||++
T Consensus 88 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~i 167 (276)
T 1mxh_A 88 SFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNL 167 (276)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEE
T ss_pred HHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEE
Confidence 468999999999865321 111 22345789999999999998733 23 799999
Q ss_pred cccccccc
Q 028043 201 SSVGVTKF 208 (214)
Q Consensus 201 SS~~~~~~ 208 (214)
||.+++.+
T Consensus 168 sS~~~~~~ 175 (276)
T 1mxh_A 168 CDAMTDLP 175 (276)
T ss_dssp CCGGGGSC
T ss_pred CchhhcCC
Confidence 99988654
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=1.7e-21 Score=159.71 Aligned_cols=127 Identities=14% Similarity=0.134 Sum_probs=100.6
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCCCc
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGVT 153 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~~d 153 (214)
+|+++||||+||||++++++|+++|++|++++|++++++++.+++. +.++.++.+|++|++++++++ ++++|
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 81 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD 81 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence 5899999999999999999999999999999999887766544432 346888999999999888643 45899
Q ss_pred EEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cC-CCeEEEEcccccccc
Q 028043 154 HVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SS-LKRIVLVSSVGVTKF 208 (214)
Q Consensus 154 ~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~-~~~iV~vSS~~~~~~ 208 (214)
+||||||...... ...++++..+++|+.|+.++++++. .+ .++||++||.+++.+
T Consensus 82 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 145 (256)
T 1geg_A 82 VIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVG 145 (256)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCC
Confidence 9999999864221 1223345678999999999988762 24 579999999887643
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.7e-21 Score=157.52 Aligned_cols=128 Identities=15% Similarity=0.152 Sum_probs=101.9
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC---CCCEEEEEecCCChhccchhh------hCC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
+||+++||||+||||++++++|+++|++|++++|+.++++++.+++. +.++.++.+|++|++++++++ +++
T Consensus 1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 80 (235)
T 3l77_A 1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGD 80 (235)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence 36899999999999999999999999999999999988776554332 467889999999999988643 458
Q ss_pred CcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc----cCCCeEEEEcccccccc
Q 028043 152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~----~~~~~iV~vSS~~~~~~ 208 (214)
+|+||||||...... ...++....+++|+.|+.++++++. +..+++|++||..+...
T Consensus 81 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~ 144 (235)
T 3l77_A 81 VDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARL 144 (235)
T ss_dssp CSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSC
T ss_pred CCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhccc
Confidence 999999999875322 1223446678999999999999873 34578888888776543
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.85 E-value=2e-21 Score=159.43 Aligned_cols=130 Identities=21% Similarity=0.237 Sum_probs=105.3
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
+++++|+++||||+||||++++++|+++|++|++++|++++++++.+++ +..+.++.+|++|.+++++++ +++
T Consensus 5 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 83 (261)
T 3n74_A 5 MSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI-GDAALAVAADISKEADVDAAVEAALSKFGK 83 (261)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-CTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-CCceEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 5678899999999999999999999999999999999999888876655 457889999999999888643 458
Q ss_pred CcEEEeccCCCCCCC----CCCCCCCchhHHHHHHHHHHHHHhcc-----C----CCeEEEEcccccccc
Q 028043 152 VTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSALPS-----S----LKRIVLVSSVGVTKF 208 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~----~~~~~~~~~~~vNv~g~~~l~~a~~~-----~----~~~iV~vSS~~~~~~ 208 (214)
+|+||||||....+. ...++..+.+++|+.|+.++++++.+ + .++||++||.+++.+
T Consensus 84 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~ 153 (261)
T 3n74_A 84 VDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRP 153 (261)
T ss_dssp CCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSC
T ss_pred CCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCC
Confidence 999999999865221 12233456779999999999987621 1 457999999988654
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.4e-21 Score=166.03 Aligned_cols=129 Identities=18% Similarity=0.216 Sum_probs=99.2
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcC-----hhHHHHHhcccC--CCCEEEEEecCCChhccchhh---
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD-----PEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI--- 148 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~-----~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~--- 148 (214)
++++|+++||||+||||++++++|+++|++|++++|+ .++++++.+... +.++.++.+|++|++++++++
T Consensus 2 ~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~ 81 (324)
T 3u9l_A 2 VMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQI 81 (324)
T ss_dssp ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Confidence 3567999999999999999999999999999998886 344444333221 457889999999999988743
Q ss_pred ---hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh----c-cCCCeEEEEccccccc
Q 028043 149 ---FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 149 ---~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~----~-~~~~~iV~vSS~~~~~ 207 (214)
++++|+||||||+..... ...++..+.+++|+.|+.++++++ + .+.++||++||.++..
T Consensus 82 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~ 151 (324)
T 3u9l_A 82 IGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAG 151 (324)
T ss_dssp HHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS
T ss_pred HHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhcc
Confidence 468999999999865322 222334567799999999999987 2 3668999999998864
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.3e-21 Score=162.91 Aligned_cols=131 Identities=16% Similarity=0.225 Sum_probs=100.5
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC---CCCEEEEEecCCChhccchhh------
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
..+++|+++||||+||||++++++|+++|++|++++|++++++++.+++. ...+.++++|++|++++++++
T Consensus 29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 108 (281)
T 4dry_A 29 GSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAE 108 (281)
T ss_dssp -----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999999988777654432 233588999999999988643
Q ss_pred hCCCcEEEeccCCCCCCC----CCCCCCCchhHHHHHHHHHHHHHhc-----cC--CCeEEEEcccccccc
Q 028043 149 FEGVTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSALP-----SS--LKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~~----~~~~~~~~~~~vNv~g~~~l~~a~~-----~~--~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||...... ...++.++.+++|+.|++++++++. .+ .++||++||.+++.+
T Consensus 109 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~ 179 (281)
T 4dry_A 109 FARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTP 179 (281)
T ss_dssp HSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCC
T ss_pred cCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCC
Confidence 568999999999864211 2233445678999999999988762 22 469999999988654
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.85 E-value=8e-22 Score=163.80 Aligned_cols=132 Identities=14% Similarity=0.120 Sum_probs=105.3
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh-----hC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI-----FE 150 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~-----~~ 150 (214)
.++++|+++||||+||||++++++|+++|++|++++|++++.+++.+++. +.++.++.+|++|++++++++ .+
T Consensus 29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g 108 (275)
T 4imr_A 29 FGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIA 108 (275)
T ss_dssp HCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhC
Confidence 34678999999999999999999999999999999999877666544432 457889999999999887643 25
Q ss_pred CCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEccccccccC
Q 028043 151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~~ 209 (214)
++|+||||||...... ...++....+++|+.|++++++++ +.+.++||++||.+++.+.
T Consensus 109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~ 175 (275)
T 4imr_A 109 PVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPK 175 (275)
T ss_dssp CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCC
Confidence 8999999999865322 223344567899999999999976 2356799999999887643
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.4e-21 Score=159.38 Aligned_cols=131 Identities=10% Similarity=0.130 Sum_probs=104.0
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
+++++|+++||||+||||++++++|+++|++|++++|++++.+++.+++. +.++.++.+|++|++++++++ +
T Consensus 7 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 86 (255)
T 1fmc_A 7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL 86 (255)
T ss_dssp GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 45678999999999999999999999999999999999887766544332 456888999999999888643 3
Q ss_pred CCCcEEEeccCCCCCCC--CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccccc
Q 028043 150 EGVTHVICCTGTTAFPS--RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~--~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~ 208 (214)
+++|+||||||...... ...++....+++|+.|+.++++++. .+.++||++||.+++.+
T Consensus 87 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~ 152 (255)
T 1fmc_A 87 GKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENK 152 (255)
T ss_dssp SSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC
T ss_pred CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCC
Confidence 58999999999865321 1122335667899999999998762 35689999999988654
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=1.4e-21 Score=161.83 Aligned_cols=129 Identities=16% Similarity=0.208 Sum_probs=99.7
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhccc---C--CCCEEEEEecCCChhccchhh------
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ---D--EETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
+++|+++||||+||||++++++|+++|++|++++|++++++++.+++ . +.++.++.+|++|++++++++
T Consensus 4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (278)
T 1spx_A 4 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK 83 (278)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHH
Confidence 56899999999999999999999999999999999998877665443 2 346888999999999888643
Q ss_pred hCCCcEEEeccCCCCCCC---C----CCCCCCchhHHHHHHHHHHHHHhcc----CCCeEEEEccccc-ccc
Q 028043 149 FEGVTHVICCTGTTAFPS---R----RWDGDNTPEKVDWEGVRNLVSALPS----SLKRIVLVSSVGV-TKF 208 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~~---~----~~~~~~~~~~vNv~g~~~l~~a~~~----~~~~iV~vSS~~~-~~~ 208 (214)
++++|+||||||...... . ..++.+..+++|+.|+.++++++.+ ..++||++||.++ +.+
T Consensus 84 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~ 155 (278)
T 1spx_A 84 FGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHA 155 (278)
T ss_dssp HSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSC
T ss_pred cCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEecccccccC
Confidence 458999999999864221 1 2233456789999999999997732 1389999999987 543
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=3e-21 Score=156.49 Aligned_cols=129 Identities=16% Similarity=0.099 Sum_probs=102.3
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh--hCCCcEEE
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--FEGVTHVI 156 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~--~~~~d~li 156 (214)
++++|+++||||+||||++++++|+++|++|++++|++++.+++.++. .+++++.+|++|++++++++ ++++|+||
T Consensus 4 ~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~id~vi 81 (244)
T 1cyd_A 4 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC--PGIEPVCVDLGDWDATEKALGGIGPVDLLV 81 (244)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS--TTCEEEECCTTCHHHHHHHHTTCCCCSEEE
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc--cCCCcEEecCCCHHHHHHHHHHcCCCCEEE
Confidence 467899999999999999999999999999999999998877665443 24677899999999988753 34799999
Q ss_pred eccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cC-CCeEEEEccccccccC
Q 028043 157 CCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SS-LKRIVLVSSVGVTKFN 209 (214)
Q Consensus 157 ~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~-~~~iV~vSS~~~~~~~ 209 (214)
||||...... ...++....+++|+.|+.++++++. .+ .++||++||..++.+.
T Consensus 82 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~ 143 (244)
T 1cyd_A 82 NNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTF 143 (244)
T ss_dssp ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC
T ss_pred ECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCC
Confidence 9999765221 1222345677999999999998762 24 5799999999887543
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.4e-21 Score=159.81 Aligned_cols=125 Identities=17% Similarity=0.240 Sum_probs=101.6
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCCcEEE
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVTHVI 156 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~d~li 156 (214)
|+++||||+||||++++++|+++|++|++++|++++++++.+++. .++.++.+|++|++++++++ ++++|+||
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv 79 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG-DNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILV 79 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC-TTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-CceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEE
Confidence 689999999999999999999999999999999988877665553 46889999999999888643 45899999
Q ss_pred eccCCCC-C-C--CCCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccccc
Q 028043 157 CCTGTTA-F-P--SRRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 157 ~~Ag~~~-~-~--~~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~ 208 (214)
||||... . + ....++....+++|+.|+.++++++. .+.++||++||.+++.+
T Consensus 80 nnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~ 140 (248)
T 3asu_A 80 NNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWP 140 (248)
T ss_dssp ECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC
T ss_pred ECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccC
Confidence 9999763 1 1 12223446678999999999998762 35689999999987654
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.85 E-value=3.1e-21 Score=160.04 Aligned_cols=130 Identities=12% Similarity=0.079 Sum_probs=101.7
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh-----hC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI-----FE 150 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~-----~~ 150 (214)
+++++|+++||||+||||++++++|+++|++|++++|++. .++..+++. +.++.++.+|++|+++++++. ++
T Consensus 27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g 105 (273)
T 3uf0_A 27 FSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDG-VKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATR 105 (273)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTH-HHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHH-HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcC
Confidence 5678999999999999999999999999999999997643 333332221 456888999999999887632 36
Q ss_pred CCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
++|+||||||...... ...+++...+++|+.|++++++++ +.+.++||++||.+++.+
T Consensus 106 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~ 171 (273)
T 3uf0_A 106 RVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQG 171 (273)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC
T ss_pred CCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCC
Confidence 8999999999875322 223344667899999999999976 235689999999988654
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.8e-21 Score=159.77 Aligned_cols=127 Identities=16% Similarity=0.183 Sum_probs=101.0
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhH--HHHHhcccC--CCCEEEEEecCCChhccchhh------hCC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK--ATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~--~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
+|+++||||+||||++++++|+++|++|++++|++++ ++++.+++. +.++.++.+|++|++++++++ +++
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 81 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG 81 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 6899999999999999999999999999999998876 655544332 356888999999999887643 468
Q ss_pred CcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCC-CeEEEEcccccccc
Q 028043 152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSL-KRIVLVSSVGVTKF 208 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~-~~iV~vSS~~~~~~ 208 (214)
+|+||||||...... ...+++...+++|+.|++++++++. .+. ++||++||.+++.+
T Consensus 82 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 147 (258)
T 3a28_C 82 FDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQG 147 (258)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSC
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccC
Confidence 999999999865321 2223445678999999999998772 255 89999999987653
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.85 E-value=3.6e-21 Score=156.67 Aligned_cols=130 Identities=15% Similarity=0.155 Sum_probs=102.2
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC-CCCEEEEEecCCChhccchhh------hCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
++++|+++||||+||||++++++|+++|++|++++|+++..+++.+.+. ..++.++.+|++|++++++++ +++
T Consensus 3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (251)
T 1zk4_A 3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGP 82 (251)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 4678999999999999999999999999999999999887776554443 246889999999999887643 457
Q ss_pred CcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh----c-cCC-CeEEEEcccccccc
Q 028043 152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSL-KRIVLVSSVGVTKF 208 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~----~-~~~-~~iV~vSS~~~~~~ 208 (214)
+|+||||||...... ...++..+.+++|+.|+.++++++ + .+. ++||++||.+++.+
T Consensus 83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~ 148 (251)
T 1zk4_A 83 VSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVG 148 (251)
T ss_dssp CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSC
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccC
Confidence 999999999864221 112233567899999998887765 2 344 79999999987654
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.1e-21 Score=162.16 Aligned_cols=124 Identities=15% Similarity=0.084 Sum_probs=98.3
Q ss_pred CCCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hC
Q 028043 77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 77 ~~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
.++++||+++||||++|||++++++|+++|++|++++|+.++. ......+++|++|++++++.+ ++
T Consensus 6 l~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~--------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 77 (261)
T 4h15_A 6 FLNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG--------LPEELFVEADLTTKEGCAIVAEATRQRLG 77 (261)
T ss_dssp CCCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT--------SCTTTEEECCTTSHHHHHHHHHHHHHHTS
T ss_pred ccCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC--------CCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 3578999999999999999999999999999999999975421 112236889999999988633 67
Q ss_pred CCcEEEeccCCCCCCC-----CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 151 GVTHVICCTGTTAFPS-----RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~-----~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
++|+||||||...... ...+++++.+++|+.|++++++++ +++.++||++||.++..+
T Consensus 78 ~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~ 145 (261)
T 4h15_A 78 GVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLP 145 (261)
T ss_dssp SCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC
T ss_pred CCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccC
Confidence 9999999999754211 223345677899999999999876 245689999999987654
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.1e-21 Score=161.59 Aligned_cols=130 Identities=15% Similarity=0.221 Sum_probs=96.3
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEc-ChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-DPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r-~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
.+++|+++||||+||||++++++|+++|++|++++| +++.++++.+++. +.++.++++|++|++++++++ +
T Consensus 26 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 105 (280)
T 4da9_A 26 QKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEF 105 (280)
T ss_dssp CCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHH
T ss_pred ccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 457899999999999999999999999999999996 6666665544432 457889999999999988743 4
Q ss_pred CCCcEEEeccCCCCCCC-----CCCCCCCchhHHHHHHHHHHHHHhc-----cC---CCeEEEEcccccccc
Q 028043 150 EGVTHVICCTGTTAFPS-----RRWDGDNTPEKVDWEGVRNLVSALP-----SS---LKRIVLVSSVGVTKF 208 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~-----~~~~~~~~~~~vNv~g~~~l~~a~~-----~~---~~~iV~vSS~~~~~~ 208 (214)
+++|+||||||...... ...+++.+.+++|+.|++++++++. .+ .++||++||.+++.+
T Consensus 106 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~ 177 (280)
T 4da9_A 106 GRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMT 177 (280)
T ss_dssp SCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-----
T ss_pred CCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccC
Confidence 68999999999842111 2233446677999999999998762 12 468999999987653
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=5.4e-21 Score=156.33 Aligned_cols=125 Identities=18% Similarity=0.169 Sum_probs=99.1
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCe-EEEEEcCh--hHHHHHhcccCCCCEEEEEecCCCh-hccchhh------
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRDP--EKATTLFGKQDEETLQVCKGDTRNP-KDLDPAI------ 148 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~-V~~~~r~~--~~~~~~~~~~~~~~~~~v~~Di~d~-~~v~~~~------ 148 (214)
++++|+++||||+||||++++++|+++|++ |++++|++ +..+++.+...+.++.++.+|++|+ +++++++
T Consensus 2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (254)
T 1sby_A 2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQ 81 (254)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHh
Confidence 467899999999999999999999999997 99999986 3445544433345688899999998 7776532
Q ss_pred hCCCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc----c-C---CCeEEEEcccccccc
Q 028043 149 FEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP----S-S---LKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~----~-~---~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||... .++.++.+++|+.|+.++++++. + + .++||++||.+++.+
T Consensus 82 ~g~id~lv~~Ag~~~-----~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 144 (254)
T 1sby_A 82 LKTVDILINGAGILD-----DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNA 144 (254)
T ss_dssp HSCCCEEEECCCCCC-----TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC
T ss_pred cCCCCEEEECCccCC-----HHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccC
Confidence 468999999999752 24556788999999999999762 2 1 468999999988654
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.9e-21 Score=166.29 Aligned_cols=129 Identities=20% Similarity=0.287 Sum_probs=107.2
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHC-CC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEE
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSR-NI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHV 155 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~-G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~l 155 (214)
..+++|+|+||||+|+||++++++|+++ |+ +|++++|++.+.+++.+.+...++.++.+|++|.+++++ ++.++|+|
T Consensus 17 ~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~-~~~~~D~V 95 (344)
T 2gn4_A 17 NMLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNY-ALEGVDIC 95 (344)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHH-HTTTCSEE
T ss_pred HhhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHH-HHhcCCEE
Confidence 4467899999999999999999999999 98 999999999887766555545679999999999999987 47899999
Q ss_pred EeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEcccccccc
Q 028043 156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 156 i~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~ 208 (214)
||+||....+.. ..++.+.+++|+.|+.++++++. .+.++||++||..++.+
T Consensus 96 ih~Aa~~~~~~~-~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~~p 148 (344)
T 2gn4_A 96 IHAAALKHVPIA-EYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAANP 148 (344)
T ss_dssp EECCCCCCHHHH-HHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSSC
T ss_pred EECCCCCCCCch-hcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccCCC
Confidence 999998653211 12345678999999999999884 57899999999887543
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=2.8e-21 Score=158.49 Aligned_cols=130 Identities=17% Similarity=0.233 Sum_probs=104.0
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
+++++|+++||||+||||++++++|+++|++|++++|+.++.+++.+++ +.++.++.+|++|++++++++ +++
T Consensus 8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 86 (265)
T 2o23_A 8 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL-GNNCVFAPADVTSEKDVQTALALAKGKFGR 86 (265)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH-CTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh-CCceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence 4567899999999999999999999999999999999988777665554 356889999999999888643 358
Q ss_pred CcEEEeccCCCCCCC---------CCCCCCCchhHHHHHHHHHHHHHhc-----c------CCCeEEEEcccccccc
Q 028043 152 VTHVICCTGTTAFPS---------RRWDGDNTPEKVDWEGVRNLVSALP-----S------SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~---------~~~~~~~~~~~vNv~g~~~l~~a~~-----~------~~~~iV~vSS~~~~~~ 208 (214)
+|+||||||...... ...++....+++|+.|+.++++++. . +.++||++||.+++.+
T Consensus 87 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~ 163 (265)
T 2o23_A 87 VDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEG 163 (265)
T ss_dssp CCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC
T ss_pred CCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCC
Confidence 999999999865321 1222345677899999999998762 1 4578999999987654
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.8e-21 Score=165.69 Aligned_cols=131 Identities=14% Similarity=0.151 Sum_probs=102.4
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhH-------HHHHhcccC--CCCEEEEEecCCChhccchhh
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-------ATTLFGKQD--EETLQVCKGDTRNPKDLDPAI 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~-------~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~ 148 (214)
..+++|+++||||+||||++++++|+++|++|++++|+.++ +++..+++. +.++.++.+|++|++++++++
T Consensus 41 ~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~ 120 (346)
T 3kvo_A 41 GRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAV 120 (346)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHH
T ss_pred CCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHH
Confidence 55789999999999999999999999999999999998764 222222221 456888999999999988743
Q ss_pred ------hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh----c-cCCCeEEEEcccccccc
Q 028043 149 ------FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 ------~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~----~-~~~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||...... ...++.+..+++|+.|++++++++ + .+.++||++||..++.+
T Consensus 121 ~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~ 194 (346)
T 3kvo_A 121 EKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNP 194 (346)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCG
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCC
Confidence 468999999999865322 122334567899999999999987 2 34579999999987654
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.7e-21 Score=157.03 Aligned_cols=129 Identities=16% Similarity=0.179 Sum_probs=92.1
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEE-EcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLL-LRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~-~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
++++|+++||||+||||++++++|+++|++|+++ .|+++..+++.+.+. +.++.++.+|++|++++++++ +
T Consensus 2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (247)
T 2hq1_A 2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAF 81 (247)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 3578999999999999999999999999999999 566665555433322 456889999999999887643 3
Q ss_pred CCCcEEEeccCCCCCC---CCCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEccccccc
Q 028043 150 EGVTHVICCTGTTAFP---SRRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~---~~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~ 207 (214)
+++|+||||||..... ....++..+.+++|+.|+.++++++. .+.++||++||.++..
T Consensus 82 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~ 147 (247)
T 2hq1_A 82 GRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGII 147 (247)
T ss_dssp SCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC-----
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcc
Confidence 5899999999986421 12334556788999999999988762 3568999999986543
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=99.85 E-value=5.4e-21 Score=158.07 Aligned_cols=128 Identities=18% Similarity=0.162 Sum_probs=100.8
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcC-hhHHHHHhcccC--CCCEEEEEecCCChhccchhh------
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD-PEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~-~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
..+++|+++||||+||||++++++|+++|++|++++++ .+..+++.+++. +.++.++.+|++|++++++++
T Consensus 14 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 93 (270)
T 3is3_A 14 GRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAH 93 (270)
T ss_dssp TCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999998765 455555444332 457889999999999988643
Q ss_pred hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEccccc
Q 028043 149 FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGV 205 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~ 205 (214)
++++|+||||||...... ...+++++.+++|+.|++++++++.+ ..++||++||..+
T Consensus 94 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~ 156 (270)
T 3is3_A 94 FGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTS 156 (270)
T ss_dssp HSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTT
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchh
Confidence 568999999999875322 23334566789999999999998732 2469999999874
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=99.85 E-value=1.8e-21 Score=160.90 Aligned_cols=131 Identities=20% Similarity=0.131 Sum_probs=102.7
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcC-hhHHHHHhcccC--CCCEEEEEecCCChhccchhh------
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD-PEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~-~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
+++++|+++||||+||||++++++|+++|++|++++|+ ++..+++.+.+. +.++.++.+|++|++++++++
T Consensus 25 m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 104 (271)
T 4iin_A 25 MQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQS 104 (271)
T ss_dssp CCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence 66789999999999999999999999999999999994 444444433322 457889999999999888743
Q ss_pred hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccccc
Q 028043 149 FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||...... ...++..+.+++|+.|+.++++++. .+.++||++||.+++.+
T Consensus 105 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~ 172 (271)
T 4iin_A 105 DGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERG 172 (271)
T ss_dssp HSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC
T ss_pred cCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCC
Confidence 458999999999875322 2223446678999999999988762 35679999999887643
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.85 E-value=4.2e-21 Score=157.99 Aligned_cols=131 Identities=15% Similarity=0.043 Sum_probs=104.9
Q ss_pred CCCCCCEEEEEcCch-HHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC---CCCEEEEEecCCChhccchhh-----
Q 028043 78 PASSSKLVLVAGGSG-GVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAI----- 148 (214)
Q Consensus 78 ~~~~~k~vlITGasg-gIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~v~~Di~d~~~v~~~~----- 148 (214)
..+++|+++||||+| |||++++++|+++|++|++++|+.+++++..+++. ..++.++.+|++|++++++++
T Consensus 18 ~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 97 (266)
T 3o38_A 18 GLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVE 97 (266)
T ss_dssp STTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHH
Confidence 457899999999986 89999999999999999999999988776655442 357899999999999988743
Q ss_pred -hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----c-CCCeEEEEcccccccc
Q 028043 149 -FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----S-SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 -~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~-~~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||+..... ...++.+..+++|+.|+.++++++. . ..++||++||.+++.+
T Consensus 98 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~ 167 (266)
T 3o38_A 98 KAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRA 167 (266)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCC
T ss_pred HhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCC
Confidence 468999999999865322 2223345678999999999999762 1 4568999999987654
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.85 E-value=4e-21 Score=156.24 Aligned_cols=131 Identities=14% Similarity=0.078 Sum_probs=103.1
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC---CCCEEEEEecC--CChhccchhh----
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDT--RNPKDLDPAI---- 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~v~~Di--~d~~~v~~~~---- 148 (214)
..+++|+++||||+||||++++++|+++|++|++++|++++++++.+++. ..+..++.+|+ +|.+++++.+
T Consensus 10 ~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~ 89 (247)
T 3i1j_A 10 ELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVE 89 (247)
T ss_dssp TTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHH
Confidence 55789999999999999999999999999999999999988877654432 24567778877 8888877633
Q ss_pred --hCCCcEEEeccCCCCCCC----CCCCCCCchhHHHHHHHHHHHHHh----c-cCCCeEEEEcccccccc
Q 028043 149 --FEGVTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 --~~~~d~li~~Ag~~~~~~----~~~~~~~~~~~vNv~g~~~l~~a~----~-~~~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||...... ...++..+.+++|+.|+.++++++ + .+.++||++||..++.+
T Consensus 90 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~ 160 (247)
T 3i1j_A 90 HEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKG 160 (247)
T ss_dssp HHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSC
T ss_pred HhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCC
Confidence 468999999999854211 122344667899999999999977 2 34579999999887654
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=2e-21 Score=157.78 Aligned_cols=129 Identities=18% Similarity=0.139 Sum_probs=101.9
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC---CCCEEEEEecCCChhccchhh------h
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
++++|+++||||+||||++++++|+++|++|++++|++++.+++.+++. +.++.++.+|++|++++++++ +
T Consensus 4 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (248)
T 2pnf_A 4 KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLV 83 (248)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence 4678999999999999999999999999999999999887766544321 356888999999999988643 3
Q ss_pred CCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEccccccc
Q 028043 150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~ 207 (214)
+++|+||||||...... ...++..+.+++|+.|+.++++++. .+.++||++||.+++.
T Consensus 84 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~ 149 (248)
T 2pnf_A 84 DGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFT 149 (248)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHH
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcC
Confidence 58999999999865221 1222345678999999998888662 3568999999987654
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.85 E-value=3.5e-21 Score=158.05 Aligned_cols=121 Identities=21% Similarity=0.234 Sum_probs=96.7
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
..+++|+++||||+||||++++++|+++|++|++++|++++++ .+.++++|++|++++++++ +++
T Consensus 17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---------~~~~~~~Dl~d~~~v~~~~~~~~~~~g~ 87 (253)
T 2nm0_A 17 RSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE---------GFLAVKCDITDTEQVEQAYKEIEETHGP 87 (253)
T ss_dssp ---CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT---------TSEEEECCTTSHHHHHHHHHHHHHHTCS
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc---------cceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 5567899999999999999999999999999999999875432 2678999999999887643 467
Q ss_pred CcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEccccccc
Q 028043 152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~ 207 (214)
+|+||||||...... ...++....+++|+.|+.++++++. .+.++||++||.+++.
T Consensus 88 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~ 151 (253)
T 2nm0_A 88 VEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLL 151 (253)
T ss_dssp CSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCC
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCC
Confidence 999999999865321 2345567788999999999998762 3567999999987754
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.85 E-value=3.4e-21 Score=157.53 Aligned_cols=131 Identities=15% Similarity=0.145 Sum_probs=103.0
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
+++++|+++||||+||||++++++|+++|++|++++|++++.+++.+.+. +.++.++.+|++|++++++++ +
T Consensus 9 ~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (260)
T 3awd_A 9 LRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQE 88 (260)
T ss_dssp GCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 45678999999999999999999999999999999999887665544332 356889999999999888643 3
Q ss_pred CCCcEEEeccCCCC-CCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccccc
Q 028043 150 EGVTHVICCTGTTA-FPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 150 ~~~d~li~~Ag~~~-~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~ 208 (214)
+++|+||||||... ... ...++..+.+++|+.|+.++++++. .+.++||++||.+++.+
T Consensus 89 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~ 156 (260)
T 3awd_A 89 GRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIV 156 (260)
T ss_dssp SCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC
T ss_pred CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhccc
Confidence 58999999999764 111 1112235667999999999998763 35689999999987653
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.85 E-value=1.7e-20 Score=158.44 Aligned_cols=125 Identities=25% Similarity=0.255 Sum_probs=102.8
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhccc---CCCCEEEE-EecCCChhccchhhhCCCc
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ---DEETLQVC-KGDTRNPKDLDPAIFEGVT 153 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~v-~~Di~d~~~v~~~~~~~~d 153 (214)
..+++|+|+||||+|+||++++++|+++|++|++++|+.++.+.+.+.+ .+.+++++ .+|++|.+++++ ++.++|
T Consensus 7 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~d 85 (342)
T 1y1p_A 7 VLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDE-VIKGAA 85 (342)
T ss_dssp SSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTT-TTTTCS
T ss_pred cCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHH-HHcCCC
Confidence 3457899999999999999999999999999999999987765543322 12468888 799999999987 467899
Q ss_pred EEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc--cCCCeEEEEccccccc
Q 028043 154 HVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP--SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 154 ~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~--~~~~~iV~vSS~~~~~ 207 (214)
+|||+||..... .++...+++|+.|+.++++++. .+.++||++||.++++
T Consensus 86 ~vih~A~~~~~~----~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~ 137 (342)
T 1y1p_A 86 GVAHIASVVSFS----NKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSAL 137 (342)
T ss_dssp EEEECCCCCSCC----SCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTC
T ss_pred EEEEeCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhc
Confidence 999999976531 2445678999999999999885 3678999999998875
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=8.3e-21 Score=158.74 Aligned_cols=131 Identities=11% Similarity=0.114 Sum_probs=103.5
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC---CCCEEEEEecCCChhccchhh------
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
..+++|+++||||+||||++++++|+++|++|++++|++++.++..+++. +.++.++.+|++|.+++++++
T Consensus 22 ~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 101 (302)
T 1w6u_A 22 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV 101 (302)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence 55788999999999999999999999999999999999887766544332 356889999999999887643
Q ss_pred hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc------cCCCeEEEEcccccccc
Q 028043 149 FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP------SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~------~~~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||...... ...++....+++|+.|+.++++++. .+.++||++||.+++.+
T Consensus 102 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~ 170 (302)
T 1w6u_A 102 AGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETG 170 (302)
T ss_dssp TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHC
T ss_pred cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccC
Confidence 457899999999764211 2223345678999999999988762 24579999999877643
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.85 E-value=2.9e-21 Score=158.74 Aligned_cols=131 Identities=16% Similarity=0.131 Sum_probs=97.5
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
+.+++|+++||||+||||++++++|+++|++|++++|++++++++.+++. +.++.++.+|++|++++++++ +
T Consensus 10 ~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 89 (266)
T 1xq1_A 10 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMF 89 (266)
T ss_dssp TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHh
Confidence 45678999999999999999999999999999999999887766544332 346888999999999888643 3
Q ss_pred -CCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 150 -EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 150 -~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
+++|+||||||...... ...++..+.+++|+.|+.++++++ +.+.++||++||.+++.+
T Consensus 90 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~ 157 (266)
T 1xq1_A 90 GGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVS 157 (266)
T ss_dssp TTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC-------
T ss_pred CCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccC
Confidence 78999999999864221 122234556799999999999977 246789999999987653
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=5.3e-21 Score=155.16 Aligned_cols=129 Identities=16% Similarity=0.131 Sum_probs=102.6
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh--hCCCcEE
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--FEGVTHV 155 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~--~~~~d~l 155 (214)
+.+++|+++||||+||||++++++|+++|++|++++|++++++++.+++. +.+++.+|++|++++++++ ++++|+|
T Consensus 3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~id~v 80 (244)
T 3d3w_A 3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP--GIEPVCVDLGDWEATERALGSVGPVDLL 80 (244)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST--TCEEEECCTTCHHHHHHHHTTCCCCCEE
T ss_pred cccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC--CCCEEEEeCCCHHHHHHHHHHcCCCCEE
Confidence 34678999999999999999999999999999999999988777655442 4567899999999988743 3479999
Q ss_pred EeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cC-CCeEEEEcccccccc
Q 028043 156 ICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SS-LKRIVLVSSVGVTKF 208 (214)
Q Consensus 156 i~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~-~~~iV~vSS~~~~~~ 208 (214)
|||||...... ...+.....+++|+.|+.++++++. .+ .++||++||.+++.+
T Consensus 81 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~ 142 (244)
T 3d3w_A 81 VNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRA 142 (244)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC
T ss_pred EECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccC
Confidence 99999865221 1222345678999999999998762 24 679999999988654
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=2.7e-21 Score=163.75 Aligned_cols=127 Identities=18% Similarity=0.250 Sum_probs=101.5
Q ss_pred CCCCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhC--CCc
Q 028043 76 VTPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVT 153 (214)
Q Consensus 76 ~~~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~--~~d 153 (214)
....+++|+|+||||+|+||++++++|+++|++|++++|+.....+..+.+ .+++++.+|++|.++++++ +. ++|
T Consensus 14 ~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l--~~v~~~~~Dl~d~~~~~~~-~~~~~~D 90 (330)
T 2pzm_A 14 LVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPV--AGLSVIEGSVTDAGLLERA-FDSFKPT 90 (330)
T ss_dssp CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSC--TTEEEEECCTTCHHHHHHH-HHHHCCS
T ss_pred CcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhcc--CCceEEEeeCCCHHHHHHH-HhhcCCC
Confidence 346678899999999999999999999999999999999764433222222 4688999999999999874 56 899
Q ss_pred EEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccccccccC
Q 028043 154 HVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 154 ~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~~ 209 (214)
+||||||..... ..+++. +++|+.|+.++++++. .+.++||++||.++|+..
T Consensus 91 ~vih~A~~~~~~--~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~ 143 (330)
T 2pzm_A 91 HVVHSAAAYKDP--DDWAED--AATNVQGSINVAKAASKAGVKRLLNFQTALCYGRP 143 (330)
T ss_dssp EEEECCCCCSCT--TCHHHH--HHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSC
T ss_pred EEEECCccCCCc--cccChh--HHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCC
Confidence 999999986532 111222 7899999999999884 577899999999998754
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.85 E-value=6.9e-21 Score=157.82 Aligned_cols=129 Identities=16% Similarity=0.225 Sum_probs=101.1
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcC-hhHHHHHhcccC--CCCEEEEEecCCChhccchhh------
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD-PEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~-~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
..+++|+++||||+||||++++++|+++|++|++++++ .+..+++.+++. +.++.++.+|++|++++++++
T Consensus 27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 106 (271)
T 3v2g_A 27 ISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEA 106 (271)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 45688999999999999999999999999999998665 455555444332 457889999999999988643
Q ss_pred hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEcccccc
Q 028043 149 FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVT 206 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~ 206 (214)
++++|+||||||...... ...+++++.+++|+.|++++++++.+ ..++||++||..+.
T Consensus 107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~ 170 (271)
T 3v2g_A 107 LGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAE 170 (271)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGT
T ss_pred cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhc
Confidence 568999999999865321 23334566789999999999998732 35799999997654
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.8e-21 Score=160.28 Aligned_cols=128 Identities=20% Similarity=0.196 Sum_probs=101.7
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCC-CCEEEEEecCCChhccchhh------hCCC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDE-ETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
++ |+++||||+||||++++++|+++|++|++++|++++++++.+++.. .++.++.+|++|++++++++ ++++
T Consensus 20 ~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 98 (272)
T 2nwq_A 20 MS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATL 98 (272)
T ss_dssp -C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSC
T ss_pred cC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 44 8999999999999999999999999999999999888776555432 36888999999999887643 4678
Q ss_pred cEEEeccCCCCC--C--CCCCCCCCchhHHHHHHHHHHHHHh-----ccCCC-eEEEEcccccccc
Q 028043 153 THVICCTGTTAF--P--SRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLK-RIVLVSSVGVTKF 208 (214)
Q Consensus 153 d~li~~Ag~~~~--~--~~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~-~iV~vSS~~~~~~ 208 (214)
|+||||||.... + ....++.+..+++|+.|++++++++ +.+.+ +||++||.+++.+
T Consensus 99 D~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~ 164 (272)
T 2nwq_A 99 RGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWP 164 (272)
T ss_dssp CEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSC
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccC
Confidence 999999998642 1 1222344667899999999988866 23567 9999999988654
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.85 E-value=4.3e-21 Score=162.44 Aligned_cols=131 Identities=13% Similarity=0.114 Sum_probs=102.3
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcC------------hhHHHHHhcccC--CCCEEEEEecCCChhc
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD------------PEKATTLFGKQD--EETLQVCKGDTRNPKD 143 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~------------~~~~~~~~~~~~--~~~~~~v~~Di~d~~~ 143 (214)
..+++|+++||||+||||++++++|+++|++|++++|+ .+.+++..+.+. +.++.++.+|++|+++
T Consensus 42 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~ 121 (317)
T 3oec_A 42 NRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLAS 121 (317)
T ss_dssp CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence 35678999999999999999999999999999999886 555554433322 4578899999999999
Q ss_pred cchhh------hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cC-CCeEEEEcccccccc
Q 028043 144 LDPAI------FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SS-LKRIVLVSSVGVTKF 208 (214)
Q Consensus 144 v~~~~------~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~-~~~iV~vSS~~~~~~ 208 (214)
+++++ ++++|+||||||+..... ...+++...+++|+.|++++++++. .+ .++||++||.+++.+
T Consensus 122 v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~ 201 (317)
T 3oec_A 122 LQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRG 201 (317)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCC
Confidence 88743 468999999999875322 2223445677999999999999762 22 468999999988654
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.85 E-value=4.3e-21 Score=156.08 Aligned_cols=127 Identities=19% Similarity=0.218 Sum_probs=100.8
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhccc-C--CCCEEEEEecCCChhccchhh------hCCC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ-D--EETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~-~--~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
+|+++||||+||||++++++|+++|++|++++|++++++++.+++ . +.++.++.+|++|++++++++ ++++
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI 81 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 689999999999999999999999999999999988877655443 1 346889999999999988643 3589
Q ss_pred cEEEeccCCCCCCC------CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 153 THVICCTGTTAFPS------RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 153 d~li~~Ag~~~~~~------~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
|+||||||...... ...++....+++|+.|+.++++++ +.+.++||++||.+++.+
T Consensus 82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~ 148 (250)
T 2cfc_A 82 DVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVA 148 (250)
T ss_dssp CEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC
T ss_pred CEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccC
Confidence 99999999864221 112234567789999999888865 235689999999987654
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=3.6e-21 Score=159.28 Aligned_cols=127 Identities=17% Similarity=0.212 Sum_probs=102.1
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
.+++|+++||||+||||++++++|+++|++|++++|++++.+++.+++. ++.++++|++|++++++++ ++++
T Consensus 6 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 83 (270)
T 1yde_A 6 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP--GAVFILCDVTQEDDVKTLVSETIRRFGRL 83 (270)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT--TEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--CCeEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999999999999999999999999999999999988877655543 4788999999999988643 4689
Q ss_pred cEEEeccCCCCCCC----CCCCCCCchhHHHHHHHHHHHHHhc----cCCCeEEEEccccccc
Q 028043 153 THVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 153 d~li~~Ag~~~~~~----~~~~~~~~~~~vNv~g~~~l~~a~~----~~~~~iV~vSS~~~~~ 207 (214)
|+||||||...... ...++.++.+++|+.|+.++++++. +..++||++||.++..
T Consensus 84 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~ 146 (270)
T 1yde_A 84 DCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAI 146 (270)
T ss_dssp CEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHH
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccC
Confidence 99999999864211 1222345678999999999999773 2358999999987643
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.1e-21 Score=159.93 Aligned_cols=123 Identities=17% Similarity=0.256 Sum_probs=99.3
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
.+++|+++||||+||||++++++|+++|++|++++|+.+..+ ...+.++.+|++|++++++++ ++++
T Consensus 25 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 97 (260)
T 3un1_A 25 RNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA-------DPDIHTVAGDISKPETADRIVREGIERFGRI 97 (260)
T ss_dssp HTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS-------STTEEEEESCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc-------cCceEEEEccCCCHHHHHHHHHHHHHHCCCC
Confidence 457899999999999999999999999999999999875432 346889999999999988643 4689
Q ss_pred cEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 153 d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
|+||||||+..... ...+++.+.+++|+.|+.++++++ +.+.++||++||..++.+
T Consensus 98 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~ 161 (260)
T 3un1_A 98 DSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQP 161 (260)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSC
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccC
Confidence 99999999875322 222344667789999999999976 345689999999887643
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=3.3e-21 Score=161.17 Aligned_cols=131 Identities=11% Similarity=0.082 Sum_probs=101.1
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEE-cChhHHHHHhcccC---CCCEEEEEecCCChh-----------
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLL-RDPEKATTLFGKQD---EETLQVCKGDTRNPK----------- 142 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~-r~~~~~~~~~~~~~---~~~~~~v~~Di~d~~----------- 142 (214)
..+++|+++||||+||||++++++|+++|++|++++ |++++++++.+++. +.++.++++|++|++
T Consensus 5 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 84 (291)
T 1e7w_A 5 TAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSA 84 (291)
T ss_dssp ---CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CC
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCccccccccccccc
Confidence 346789999999999999999999999999999999 99887776554432 457889999999998
Q ss_pred ------ccchhh------hCCCcEEEeccCCCCCCC---CC--------------CCCCCchhHHHHHHHHHHHHHhc--
Q 028043 143 ------DLDPAI------FEGVTHVICCTGTTAFPS---RR--------------WDGDNTPEKVDWEGVRNLVSALP-- 191 (214)
Q Consensus 143 ------~v~~~~------~~~~d~li~~Ag~~~~~~---~~--------------~~~~~~~~~vNv~g~~~l~~a~~-- 191 (214)
++++++ ++++|+||||||...... .. .+.....+++|+.|++++++++.
T Consensus 85 ~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 164 (291)
T 1e7w_A 85 PVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHR 164 (291)
T ss_dssp CBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 776532 468999999999865221 11 22234667999999999998762
Q ss_pred ---cC------CCeEEEEcccccccc
Q 028043 192 ---SS------LKRIVLVSSVGVTKF 208 (214)
Q Consensus 192 ---~~------~~~iV~vSS~~~~~~ 208 (214)
.+ .++||++||.+++.+
T Consensus 165 m~~~~~~~~~~~g~Iv~isS~~~~~~ 190 (291)
T 1e7w_A 165 VAGTPAKHRGTNYSIINMVDAMTNQP 190 (291)
T ss_dssp HHTSCGGGSCSCEEEEEECCTTTTSC
T ss_pred HHhcCCCCCCCCcEEEEEechhhcCC
Confidence 23 579999999988654
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.85 E-value=3.7e-21 Score=154.20 Aligned_cols=114 Identities=20% Similarity=0.304 Sum_probs=95.1
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccCC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGT 161 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag~ 161 (214)
+|+|+||||+|+||++++++|+++|++|++++|++++.+.+ ..+++++.+|++|.+++++ ++.++|+|||+||.
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----~~~~~~~~~Dl~d~~~~~~-~~~~~d~vi~~a~~ 77 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE-----NEHLKVKKADVSSLDEVCE-VCKGADAVISAFNP 77 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC-----CTTEEEECCCTTCHHHHHH-HHTTCSEEEECCCC
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc-----cCceEEEEecCCCHHHHHH-HhcCCCEEEEeCcC
Confidence 57999999999999999999999999999999998765432 2578999999999999987 47889999999986
Q ss_pred CCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEcccccccc
Q 028043 162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 162 ~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~ 208 (214)
.. .. ...+++|+.++.+++++++ .+.+++|++||.++++.
T Consensus 78 ~~------~~-~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~ 118 (227)
T 3dhn_A 78 GW------NN-PDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFI 118 (227)
T ss_dssp -------------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEE
T ss_pred CC------CC-hhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccC
Confidence 53 11 2267899999999999985 57789999999987653
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.4e-21 Score=159.75 Aligned_cols=131 Identities=12% Similarity=0.198 Sum_probs=102.5
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh---hHHHHHhcccC--CCCEEEEEecCCChhccchhh----
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP---EKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI---- 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~---~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~---- 148 (214)
+++++|+++||||+||||++++++|+++|++|++++|.. +.++++.+++. +.++.++.+|++|++++++++
T Consensus 7 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 86 (262)
T 3ksu_A 7 HDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAE 86 (262)
T ss_dssp SCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 567899999999999999999999999999999987753 44554444332 456888999999999988743
Q ss_pred --hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEcccccccc
Q 028043 149 --FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 --~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||...... ...++....+++|+.|++++++++.+ ..++||++||.+++.+
T Consensus 87 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~ 154 (262)
T 3ksu_A 87 KEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAY 154 (262)
T ss_dssp HHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccC
Confidence 468999999999875322 22233456778999999999998844 3468999999877653
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=5.1e-21 Score=160.07 Aligned_cols=131 Identities=12% Similarity=0.088 Sum_probs=102.5
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHH-HHHhccc--CCCCEEEEEecCCChhccchhh------
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA-TTLFGKQ--DEETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~-~~~~~~~--~~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
..+++|+++||||+||||++++++|+++|++|++++|+.+.. +...+.. .+.++.++.+|++|++++++++
T Consensus 43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 122 (291)
T 3ijr_A 43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQ 122 (291)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 457899999999999999999999999999999999987543 3222221 1457889999999999888643
Q ss_pred hCCCcEEEeccCCCCCCC----CCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEcccccccc
Q 028043 149 FEGVTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~~----~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||...... ...+++.+.+++|+.|++++++++.+ ..++||++||.+++.+
T Consensus 123 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~ 189 (291)
T 3ijr_A 123 LGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEG 189 (291)
T ss_dssp HSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHC
T ss_pred cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCC
Confidence 568999999999864211 13334567789999999999998843 3468999999987654
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.4e-21 Score=160.35 Aligned_cols=125 Identities=18% Similarity=0.194 Sum_probs=98.6
Q ss_pred CCCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hC
Q 028043 77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 77 ~~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
...+++|+||||||+||||++++++|+++|++|++++|+++... ..+..+++|++|++++++++ ++
T Consensus 9 ~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~--------~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 80 (269)
T 3vtz_A 9 MEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV--------NVSDHFKIDVTNEEEVKEAVEKTTKKYG 80 (269)
T ss_dssp -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT--------TSSEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc--------CceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 35678999999999999999999999999999999999876432 24567899999999988743 46
Q ss_pred CCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEccccccccC
Q 028043 151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~~ 209 (214)
++|+||||||...... ...+...+.+++|+.|++++++++. .+.++||++||.+++.+.
T Consensus 81 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~ 147 (269)
T 3vtz_A 81 RIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAAT 147 (269)
T ss_dssp CCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBC
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCC
Confidence 8999999999865322 1223345667899999999999762 356799999999887643
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=9.7e-21 Score=156.02 Aligned_cols=125 Identities=15% Similarity=0.134 Sum_probs=99.5
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC----CCCEEEEEecCCChhccchhh------
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
++++|+++||||+||||++++++|+++|++|++++|++++.++..+++. +.++.++.+|++|++++++++
T Consensus 4 m~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 83 (267)
T 2gdz_A 4 MVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDH 83 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHH
Confidence 3568999999999999999999999999999999999887665443332 345888999999999888643
Q ss_pred hCCCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHh----cc-C---CCeEEEEcccccccc
Q 028043 149 FEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL----PS-S---LKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~----~~-~---~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||... .+++.+.+++|+.|+.++++++ ++ + .++||++||.+++.+
T Consensus 84 ~g~id~lv~~Ag~~~-----~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 146 (267)
T 2gdz_A 84 FGRLDILVNNAGVNN-----EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMP 146 (267)
T ss_dssp HSCCCEEEECCCCCC-----SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC
T ss_pred cCCCCEEEECCCCCC-----hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCC
Confidence 468999999999753 2345667899999887776654 32 2 579999999988654
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.84 E-value=7.6e-21 Score=156.18 Aligned_cols=129 Identities=12% Similarity=0.096 Sum_probs=99.7
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh-------hC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI-------FE 150 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~-------~~ 150 (214)
+++|+++||||+||||++++++|+++|++|++++|++++++++.+++. +.++.++.+|++|++++++++ ++
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g 82 (260)
T 2qq5_A 3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQG 82 (260)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 568999999999999999999999999999999999888766554432 346788999999999887632 56
Q ss_pred CCcEEEeccCC--C------CCC--CCCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 151 GVTHVICCTGT--T------AFP--SRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 151 ~~d~li~~Ag~--~------~~~--~~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
++|+||||||. . ..+ ....+.+...+++|+.|++++++++ +.+.++||++||.+++.+
T Consensus 83 ~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 155 (260)
T 2qq5_A 83 RLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQY 155 (260)
T ss_dssp CCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSC
T ss_pred CceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCC
Confidence 89999999953 2 111 1222334566788999998887765 235689999999987653
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.84 E-value=5e-21 Score=160.33 Aligned_cols=132 Identities=13% Similarity=0.120 Sum_probs=102.3
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh--hHHHHHhcccC--CCCEEEEEecCCChhccchhh-----
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP--EKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI----- 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~--~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~----- 148 (214)
..+++|+++||||+||||++++++|+++|++|++++|+. +..+++.+.+. +.++.++.+|++|++++++++
T Consensus 45 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 124 (294)
T 3r3s_A 45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKARE 124 (294)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 457899999999999999999999999999999999873 33333332221 457888999999999887643
Q ss_pred -hCCCcEEEeccCCCCC-C---CCCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEccccccccC
Q 028043 149 -FEGVTHVICCTGTTAF-P---SRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 149 -~~~~d~li~~Ag~~~~-~---~~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~~~ 209 (214)
++++|+||||||.... . ....+++.+.+++|+.|++++++++.+ ..++||++||.+++.+.
T Consensus 125 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~ 193 (294)
T 3r3s_A 125 ALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPS 193 (294)
T ss_dssp HHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCC
T ss_pred HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCC
Confidence 5689999999998542 1 122334467789999999999998843 23599999999887643
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.84 E-value=4.5e-21 Score=157.14 Aligned_cols=129 Identities=19% Similarity=0.160 Sum_probs=101.3
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCC---------CCEEEEEecCCChhccchhh-
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDE---------ETLQVCKGDTRNPKDLDPAI- 148 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~---------~~~~~v~~Di~d~~~v~~~~- 148 (214)
.+++|+++||||+||||++++++|+++|++|++++|++++.+++.+++.. .++.++.+|++|++++++++
T Consensus 4 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 83 (264)
T 2pd6_A 4 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLE 83 (264)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHH
Confidence 35789999999999999999999999999999999999887776554431 45788999999999887643
Q ss_pred -----hCCC-cEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhcc-----C-CCeEEEEccccccc
Q 028043 149 -----FEGV-THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS-----S-LKRIVLVSSVGVTK 207 (214)
Q Consensus 149 -----~~~~-d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~-----~-~~~iV~vSS~~~~~ 207 (214)
++++ |+||||||...... ...++....+++|+.|+.++++++.+ + .++||++||.+++.
T Consensus 84 ~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~ 157 (264)
T 2pd6_A 84 QVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKV 157 (264)
T ss_dssp HHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHH
T ss_pred HHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhcc
Confidence 4567 99999999865321 22234456789999999999997732 3 57999999987654
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.84 E-value=5.6e-21 Score=163.59 Aligned_cols=130 Identities=18% Similarity=0.174 Sum_probs=101.9
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHH--CCCeEEEEEcChhHHH-------HH--hcccCCCCEEEEEecCCChhccch
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLS--RNIKSRLLLRDPEKAT-------TL--FGKQDEETLQVCKGDTRNPKDLDP 146 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~--~G~~V~~~~r~~~~~~-------~~--~~~~~~~~~~~v~~Di~d~~~v~~ 146 (214)
+.+++|+|+||||+|+||++++++|++ .|++|++++|+..... .+ .......++.++.+|++|++++++
T Consensus 6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~ 85 (362)
T 3sxp_A 6 DELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRR 85 (362)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHH
T ss_pred hhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHH
Confidence 456789999999999999999999999 9999999999764110 00 111224467899999999999987
Q ss_pred hhhCCCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEEccccccccCC
Q 028043 147 AIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNE 210 (214)
Q Consensus 147 ~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~vSS~~~~~~~~ 210 (214)
+...++|+|||+||.... ..++....+++|+.|+.++++++++...+||++||.++|+...
T Consensus 86 ~~~~~~D~vih~A~~~~~---~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~V~~SS~~vyg~~~ 146 (362)
T 3sxp_A 86 LEKLHFDYLFHQAAVSDT---TMLNQELVMKTNYQAFLNLLEIARSKKAKVIYASSAGVYGNTK 146 (362)
T ss_dssp HTTSCCSEEEECCCCCGG---GCCCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEGGGGCSCC
T ss_pred hhccCCCEEEECCccCCc---cccCHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCcHHHhCCCC
Confidence 436789999999997642 2345567889999999999999965334599999999987644
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=99.84 E-value=2.5e-21 Score=158.60 Aligned_cols=127 Identities=14% Similarity=0.100 Sum_probs=97.9
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
+++|+++||||+||||++++++|+++|++|++++|+++ ++..+++. +.++.++.+|++|++++++++ +++
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 79 (255)
T 2q2v_A 2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGG 79 (255)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 46799999999999999999999999999999999865 22211111 346788999999999988643 358
Q ss_pred CcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
+|+||||||...... ...++....+++|+.|++++++++ +.+.++||++||.+++.+
T Consensus 80 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 144 (255)
T 2q2v_A 80 VDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVG 144 (255)
T ss_dssp CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSC
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccC
Confidence 999999999864221 122334567899999998888865 235689999999988654
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=5.7e-21 Score=158.85 Aligned_cols=131 Identities=15% Similarity=0.152 Sum_probs=101.9
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhH-HHHHhcccC--CCCEEEEEecCCChhccchhh------
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-ATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~-~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
+.+++|+++||||+||||++++++|+++|++|++++|+.+. .+++.+++. +.++.++.+|++|.+++++++
T Consensus 25 ~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 104 (283)
T 1g0o_A 25 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKI 104 (283)
T ss_dssp GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999998654 333322221 456888999999999887633
Q ss_pred hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEcccccccc
Q 028043 149 FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||...... ...++.+..+++|+.|++++++++.+ +.++||++||.+++..
T Consensus 105 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~ 170 (283)
T 1g0o_A 105 FGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAK 170 (283)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCS
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccC
Confidence 468999999999865321 12234466789999999999998732 4579999999887643
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.4e-21 Score=159.33 Aligned_cols=129 Identities=16% Similarity=0.116 Sum_probs=100.0
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEE-EcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLL-LRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~-~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
+.+++|+++||||+||||++++++|+++|++|+++ .|+.+..++..+++. +.++.++.+|++|++++++++
T Consensus 4 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (259)
T 3edm_A 4 QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADK 83 (259)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 45678999999999999999999999999999998 555555554433332 456888999999999988743
Q ss_pred hCCCcEEEeccCCCCCCC----CCCCCCCchhHHHHHHHHHHHHHhccC---CCeEEEEcccccc
Q 028043 149 FEGVTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSALPSS---LKRIVLVSSVGVT 206 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~~----~~~~~~~~~~~vNv~g~~~l~~a~~~~---~~~iV~vSS~~~~ 206 (214)
++++|+||||||...... ...+++.+.+++|+.|++++++++.+. .++||++||.+++
T Consensus 84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~ 148 (259)
T 3edm_A 84 FGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGR 148 (259)
T ss_dssp HCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHH
T ss_pred hCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhc
Confidence 468999999999763211 122233567899999999999988442 3589999999876
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.9e-21 Score=160.93 Aligned_cols=131 Identities=19% Similarity=0.245 Sum_probs=98.2
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEE-cChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLL-RDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~-r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
+++++|+++||||+||||++++++|+++|++|++++ |+.+..+++.+++. +.++.++.+|++|++++++++
T Consensus 23 m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 102 (267)
T 3u5t_A 23 MMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEA 102 (267)
T ss_dssp ----CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 456789999999999999999999999999999884 45555555443332 456889999999999988743
Q ss_pred hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEcccccccc
Q 028043 149 FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||+..... ...+++++.+++|+.|++++++++.+ ..++||++||.++..+
T Consensus 103 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 168 (267)
T 3u5t_A 103 FGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLL 168 (267)
T ss_dssp HSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHC
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccC
Confidence 468999999999875322 12223456678999999999997732 2369999999877543
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=99.84 E-value=4.8e-21 Score=158.04 Aligned_cols=121 Identities=19% Similarity=0.207 Sum_probs=97.5
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
++++|+++||||+||||++++++|+++|++|++++|++++ +.++.++.+|++|++++++++ ++++
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~---------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 75 (264)
T 2dtx_A 5 DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG---------EAKYDHIECDVTNPDQVKASIDHIFKEYGSI 75 (264)
T ss_dssp GGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC---------SCSSEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc---------CCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 3578999999999999999999999999999999998754 245788999999999888643 4589
Q ss_pred cEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccccc
Q 028043 153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 153 d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~ 208 (214)
|+||||||...... ...+++...+++|+.|+.++++++. .+.++||++||.+++.+
T Consensus 76 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~ 139 (264)
T 2dtx_A 76 SVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASII 139 (264)
T ss_dssp CEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSC
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccC
Confidence 99999999865321 1223345677999999999998762 35689999999988654
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=4.5e-21 Score=159.66 Aligned_cols=131 Identities=15% Similarity=0.166 Sum_probs=103.5
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
+.+++|+++||||+||||++++++|+++|++|++++|++++++++.+++. +.++.++.+|++|++++++++ +
T Consensus 40 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 119 (285)
T 2c07_A 40 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH 119 (285)
T ss_dssp CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred ccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhc
Confidence 55678999999999999999999999999999999999887766544432 346888999999999988743 3
Q ss_pred CCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccccc
Q 028043 150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~ 208 (214)
+++|+||||||...... ...++....+++|+.|+.++++++. .+.++||++||.+++.+
T Consensus 120 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~ 186 (285)
T 2c07_A 120 KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTG 186 (285)
T ss_dssp SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccC
Confidence 68999999999864221 1222345677999999999888762 35689999999977543
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.84 E-value=9.8e-21 Score=152.74 Aligned_cols=126 Identities=14% Similarity=0.148 Sum_probs=99.9
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhh---CCCcEEEec
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF---EGVTHVICC 158 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~---~~~d~li~~ 158 (214)
||+++||||+||||++++++|+++|++|++++|++++++++.+++ +.++.++.+|++|.+++++++- ...|+||||
T Consensus 1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~~ 79 (230)
T 3guy_A 1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL-SNNVGYRARDLASHQEVEQLFEQLDSIPSTVVHS 79 (230)
T ss_dssp --CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC-SSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEEC
T ss_pred CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH-hhccCeEeecCCCHHHHHHHHHHHhhcCCEEEEe
Confidence 478999999999999999999999999999999999988877665 4567889999999999987431 234999999
Q ss_pred cCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc----cCCCeEEEEcccccccc
Q 028043 159 TGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 159 Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~----~~~~~iV~vSS~~~~~~ 208 (214)
||...... ...++..+.+++|+.|+.++++++. +..++||++||.+++.+
T Consensus 80 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~ 136 (230)
T 3guy_A 80 AGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQP 136 (230)
T ss_dssp CCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSC
T ss_pred CCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCC
Confidence 99865322 2223345677999999999999762 23349999999988654
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=6.6e-21 Score=156.07 Aligned_cols=129 Identities=17% Similarity=0.156 Sum_probs=101.0
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEc-ChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-DPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r-~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
+++|+++||||+||||++++++|+++|++|++++| +++..+++.+++. +.++.++.+|++|++++++++ ++
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 84 (261)
T 1gee_A 5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFG 84 (261)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 56899999999999999999999999999999999 7776665544332 346788999999999887643 35
Q ss_pred CCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cC-CCeEEEEcccccccc
Q 028043 151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SS-LKRIVLVSSVGVTKF 208 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~-~~~iV~vSS~~~~~~ 208 (214)
++|+||||||...... ...++..+.+++|+.|+.++++++. .+ .++||++||.+++.+
T Consensus 85 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~ 151 (261)
T 1gee_A 85 KLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIP 151 (261)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCC
Confidence 8999999999865221 1223345677999999999888762 23 579999999887643
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.84 E-value=2e-21 Score=158.93 Aligned_cols=131 Identities=15% Similarity=0.160 Sum_probs=98.2
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEE-cChhHHHHHhccc--CCCCEEEEEecCCChhccchhh------
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLL-RDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~-r~~~~~~~~~~~~--~~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
....+|+++||||+||||++++++|+++|++|++++ |+.++.++..+.+ .+.++.++.+|++|.+++++++
T Consensus 9 ~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 88 (256)
T 3ezl_A 9 MVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAE 88 (256)
T ss_dssp ----CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHh
Confidence 556789999999999999999999999999999988 5554444332222 1456889999999999888643
Q ss_pred hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 149 FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||...... ...++..+.+++|+.|+.++++++ +.+.++||++||.+++.+
T Consensus 89 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~ 156 (256)
T 3ezl_A 89 VGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKG 156 (256)
T ss_dssp TCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGS
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccC
Confidence 468999999999875321 222334567899999999998876 235679999999987654
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.84 E-value=1e-20 Score=160.11 Aligned_cols=120 Identities=15% Similarity=0.098 Sum_probs=94.1
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccCC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGT 161 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag~ 161 (214)
+|+|+||||+|+||++++++|+++|++|++++|++++.+.+. ..+++++.+|++|.+++++ ++.++|+|||+||.
T Consensus 13 ~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~----~~~~~~~~~Dl~d~~~~~~-~~~~~d~vih~a~~ 87 (342)
T 2x4g_A 13 HVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLA----YLEPECRVAEMLDHAGLER-ALRGLDGVIFSAGY 87 (342)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGG----GGCCEEEECCTTCHHHHHH-HTTTCSEEEEC---
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhc----cCCeEEEEecCCCHHHHHH-HHcCCCEEEECCcc
Confidence 468999999999999999999999999999999876654432 2367889999999999987 46789999999997
Q ss_pred CCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccccccccC
Q 028043 162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 162 ~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~~ 209 (214)
... ..++....+++|+.|+.+++++++ .+.++||++||.++|+..
T Consensus 88 ~~~---~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~ 133 (342)
T 2x4g_A 88 YPS---RPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRH 133 (342)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCC
T ss_pred CcC---CCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcC
Confidence 541 223556788999999999999985 478899999999998753
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.84 E-value=4e-21 Score=157.52 Aligned_cols=127 Identities=18% Similarity=0.209 Sum_probs=101.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCC--CeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
++|+++||||+||||++++++|+++| +.|++++|++++++++.+++ +.++.++.+|++|++++++++ ++++
T Consensus 1 Mgk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 79 (254)
T 3kzv_A 1 MGKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY-GDRFFYVVGDITEDSVLKQLVNAAVKGHGKI 79 (254)
T ss_dssp -CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH-GGGEEEEESCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh-CCceEEEECCCCCHHHHHHHHHHHHHhcCCc
Confidence 36899999999999999999999985 78999999998888776555 356889999999999988743 4689
Q ss_pred cEEEeccCCCCCCC----CCCCCCCchhHHHHHHHHHHHHHh----ccCCCeEEEEcccccccc
Q 028043 153 THVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 153 d~li~~Ag~~~~~~----~~~~~~~~~~~vNv~g~~~l~~a~----~~~~~~iV~vSS~~~~~~ 208 (214)
|+||||||...... ...++++..+++|+.|++++++++ ++..++||++||.+++.+
T Consensus 80 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~g~iv~isS~~~~~~ 143 (254)
T 3kzv_A 80 DSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTNGNVVFVSSDACNMY 143 (254)
T ss_dssp CEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCSCCCCS
T ss_pred cEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEcCchhccC
Confidence 99999999854211 222334567899999999999977 332389999999988654
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.7e-21 Score=158.60 Aligned_cols=126 Identities=16% Similarity=0.192 Sum_probs=95.3
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh-----hCCC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-----FEGV 152 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~-----~~~~ 152 (214)
+++++|+++||||+||||++++++|+++|++|++++|+.+...+.. +.++.++++|++|++++++++ ++++
T Consensus 5 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~~g~i 80 (257)
T 3tl3_A 5 MEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADL----GDRARFAAADVTDEAAVASALDLAETMGTL 80 (257)
T ss_dssp -----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHT----CTTEEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred ceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHHHhc----CCceEEEECCCCCHHHHHHHHHHHHHhCCC
Confidence 5578899999999999999999999999999999999765543322 457889999999999988643 4689
Q ss_pred cEEEeccCCCCCC-------CCCCCCCCchhHHHHHHHHHHHHHhc-------------cCCCeEEEEccccccc
Q 028043 153 THVICCTGTTAFP-------SRRWDGDNTPEKVDWEGVRNLVSALP-------------SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 153 d~li~~Ag~~~~~-------~~~~~~~~~~~~vNv~g~~~l~~a~~-------------~~~~~iV~vSS~~~~~ 207 (214)
|+||||||..... ....+++++.+++|+.|++++++++. .+.++||++||.+++.
T Consensus 81 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~ 155 (257)
T 3tl3_A 81 RIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFD 155 (257)
T ss_dssp EEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--C
T ss_pred CEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcC
Confidence 9999999976421 12233456778999999999999762 2345899999998764
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.5e-20 Score=152.17 Aligned_cols=122 Identities=29% Similarity=0.500 Sum_probs=99.6
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHC--CCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSR--NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
+++|+|+||||+|+||++++++|+++ |++|++++|++++.+++ ..+++++.+|++|.+++++ ++.++|+|||
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-----~~~~~~~~~D~~d~~~~~~-~~~~~d~vi~ 75 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-----GGEADVFIGDITDADSINP-AFQGIDALVI 75 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-----TCCTTEEECCTTSHHHHHH-HHTTCSEEEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-----CCCeeEEEecCCCHHHHHH-HHcCCCEEEE
Confidence 35789999999999999999999999 89999999998776654 2456789999999999987 4788999999
Q ss_pred ccCCCCC------------CCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccccccc
Q 028043 158 CTGTTAF------------PSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 158 ~Ag~~~~------------~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~ 207 (214)
|||.... +...++.....+++|+.++.+++++++ .+.++||++||.+++.
T Consensus 76 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~ 138 (253)
T 1xq6_A 76 LTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTN 138 (253)
T ss_dssp CCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTC
T ss_pred eccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCC
Confidence 9997642 111223334567999999999999885 4778999999998754
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.4e-21 Score=166.31 Aligned_cols=128 Identities=19% Similarity=0.180 Sum_probs=101.5
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhH----HHHHhcccC---CCCEEEEEecCCChhccchhhhCCC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK----ATTLFGKQD---EETLQVCKGDTRNPKDLDPAIFEGV 152 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~----~~~~~~~~~---~~~~~~v~~Di~d~~~v~~~~~~~~ 152 (214)
+++|+||||||+|+||++++++|+++|++|++++|+... .+.+..... ..+++++.+|++|.+++++ ++.++
T Consensus 23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~-~~~~~ 101 (351)
T 3ruf_A 23 FSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQ-VMKGV 101 (351)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHH-HTTTC
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHH-HhcCC
Confidence 467899999999999999999999999999999996532 232222111 1578999999999999987 47799
Q ss_pred cEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccccccccC
Q 028043 153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 153 d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~~ 209 (214)
|+|||+||..... ..+.+....+++|+.|+.+++++++ .+.++||++||.++|+..
T Consensus 102 d~Vih~A~~~~~~-~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~ 158 (351)
T 3ruf_A 102 DHVLHQAALGSVP-RSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDH 158 (351)
T ss_dssp SEEEECCCCCCHH-HHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTC
T ss_pred CEEEECCccCCcc-hhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCC
Confidence 9999999975421 1223445677999999999999984 578899999999998753
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.84 E-value=1.5e-21 Score=165.31 Aligned_cols=126 Identities=18% Similarity=0.225 Sum_probs=99.8
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhccc---CCCCEEEEEecCCChhccchhhhC--CCcEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ---DEETLQVCKGDTRNPKDLDPAIFE--GVTHV 155 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~v~~Di~d~~~v~~~~~~--~~d~l 155 (214)
++|+|+||||+||||++++++|+++|++|++++|+.+..++..+.+ .+.+++++.+|++|+++++++ +. ++|+|
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~~~d~v 82 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARI-FDAHPITAA 82 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHH-HHHSCCCEE
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHH-HhccCCcEE
Confidence 5689999999999999999999999999999999765433322111 135688999999999999875 44 89999
Q ss_pred EeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEcccccccc
Q 028043 156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 156 i~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~ 208 (214)
|||||..... ..++...+.+++|+.|+.+++++++ .+.++||++||.++|+.
T Consensus 83 ih~A~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~ 135 (341)
T 3enk_A 83 IHFAALKAVG-ESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGV 135 (341)
T ss_dssp EECCCCCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCS
T ss_pred EECccccccC-ccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecC
Confidence 9999986421 1122344678999999999999885 46789999999999864
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.84 E-value=1.1e-21 Score=158.73 Aligned_cols=125 Identities=23% Similarity=0.290 Sum_probs=100.6
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC--eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
+++|+|+||||+||||++++++|+++|+ +|++++|++++.++.. ..++.++.+|++|++++++ ++.++|+|||
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~----~~~~~~~~~D~~d~~~~~~-~~~~~d~vi~ 90 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA----YKNVNQEVVDFEKLDDYAS-AFQGHDVGFC 90 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG----GGGCEEEECCGGGGGGGGG-GGSSCSEEEE
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc----cCCceEEecCcCCHHHHHH-HhcCCCEEEE
Confidence 3568999999999999999999999999 9999999876543322 2357889999999999987 4789999999
Q ss_pred ccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccccccccCCCCC
Q 028043 158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNELPW 213 (214)
Q Consensus 158 ~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~~~~p~ 213 (214)
|||..... ......+++|+.++.+++++++ .+.++||++||.++++....+|
T Consensus 91 ~ag~~~~~----~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~Y 143 (242)
T 2bka_A 91 CLGTTRGK----AGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSSNFLY 143 (242)
T ss_dssp CCCCCHHH----HHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCSSHH
T ss_pred CCCccccc----CCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCCCcchH
Confidence 99975321 1234567899999999999884 4678999999999876543333
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=4.5e-21 Score=162.91 Aligned_cols=117 Identities=25% Similarity=0.309 Sum_probs=95.6
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
...++|+||||||+|+||++++++|+++|++|++++|+++. .+++++.+|++|.+++.+ ++.++|+|||
T Consensus 15 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~----------~~~~~~~~Dl~d~~~~~~-~~~~~d~vih 83 (347)
T 4id9_A 15 VPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG----------TGGEEVVGSLEDGQALSD-AIMGVSAVLH 83 (347)
T ss_dssp ------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS----------SCCSEEESCTTCHHHHHH-HHTTCSEEEE
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC----------CCccEEecCcCCHHHHHH-HHhCCCEEEE
Confidence 55678999999999999999999999999999999998754 346789999999999987 4679999999
Q ss_pred ccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEcccccccc
Q 028043 158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 158 ~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~ 208 (214)
+||....... .....+++|+.|+.+++++++ .+.++||++||.++|+.
T Consensus 84 ~A~~~~~~~~---~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~ 132 (347)
T 4id9_A 84 LGAFMSWAPA---DRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPE 132 (347)
T ss_dssp CCCCCCSSGG---GHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTT
T ss_pred CCcccCcchh---hHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCC
Confidence 9997653222 225678999999999999984 57889999999999875
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=6.4e-21 Score=154.65 Aligned_cols=127 Identities=15% Similarity=0.180 Sum_probs=101.8
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCC-------eEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh----
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNI-------KSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI---- 148 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~-------~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~---- 148 (214)
+|+++||||+||||++++++|+++|+ +|++++|++++.+++.+++. +.++.++.+|++|++++++++
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 81 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV 81 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence 58999999999999999999999999 99999999887776654432 346888999999999888643
Q ss_pred --hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccccc
Q 028043 149 --FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 --~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||...... ...++....+++|+.|+.++++++. .+.++||++||.+++.+
T Consensus 82 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~ 151 (244)
T 2bd0_A 82 ERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKA 151 (244)
T ss_dssp HHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC
T ss_pred HhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCC
Confidence 358999999999864221 1223345677999999999998762 35689999999988754
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=99.84 E-value=4.2e-21 Score=160.02 Aligned_cols=131 Identities=15% Similarity=0.133 Sum_probs=99.2
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh-hHHHHHhcccC---CCCEEEEEecCCC----hhccchhh-
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP-EKATTLFGKQD---EETLQVCKGDTRN----PKDLDPAI- 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~-~~~~~~~~~~~---~~~~~~v~~Di~d----~~~v~~~~- 148 (214)
.++++|+++||||+||||++++++|+++|++|++++|++ ++++++.+++. +.++.++.+|++| ++++++++
T Consensus 19 ~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~ 98 (288)
T 2x9g_A 19 SHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIIN 98 (288)
T ss_dssp ---CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHH
Confidence 456789999999999999999999999999999999998 76665544332 4568899999999 88777533
Q ss_pred -----hCCCcEEEeccCCCCCCCC-------------CCCCCCchhHHHHHHHHHHHHHhc-----cC------CCeEEE
Q 028043 149 -----FEGVTHVICCTGTTAFPSR-------------RWDGDNTPEKVDWEGVRNLVSALP-----SS------LKRIVL 199 (214)
Q Consensus 149 -----~~~~d~li~~Ag~~~~~~~-------------~~~~~~~~~~vNv~g~~~l~~a~~-----~~------~~~iV~ 199 (214)
++++|+||||||....... ..++....+++|+.|++++++++. .+ .++||+
T Consensus 99 ~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~ 178 (288)
T 2x9g_A 99 SCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVN 178 (288)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEE
T ss_pred HHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEE
Confidence 4689999999998642211 011224567899999999998762 12 469999
Q ss_pred Ecccccccc
Q 028043 200 VSSVGVTKF 208 (214)
Q Consensus 200 vSS~~~~~~ 208 (214)
+||.+++.+
T Consensus 179 isS~~~~~~ 187 (288)
T 2x9g_A 179 LCDAMVDQP 187 (288)
T ss_dssp ECCTTTTSC
T ss_pred EecccccCC
Confidence 999988654
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=99.84 E-value=4.2e-21 Score=158.55 Aligned_cols=131 Identities=16% Similarity=0.222 Sum_probs=99.9
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEE-cChhHHHHHhccc--CCCCEEEEEecCCChhccchhh------
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLL-RDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~-r~~~~~~~~~~~~--~~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
.++++|+++||||+||||++++++|+++|++|++++ |+.+..++..... .+.++.++.+|++|++++++++
T Consensus 21 ~~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 100 (269)
T 3gk3_A 21 SMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLAD 100 (269)
T ss_dssp ---CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred hhhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 346789999999999999999999999999999998 5555554433322 1456889999999999988643
Q ss_pred hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEcccccccc
Q 028043 149 FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||...... ...++....+++|+.|+.++++++. .+.++||++||.+++.+
T Consensus 101 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~ 168 (269)
T 3gk3_A 101 FGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRG 168 (269)
T ss_dssp HSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC
T ss_pred cCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccC
Confidence 468999999999875322 1223345678999999999998762 35679999999877643
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.9e-20 Score=158.59 Aligned_cols=124 Identities=27% Similarity=0.391 Sum_probs=94.3
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhc--ccCC--CCEEEEEecCCChhccchhhhCCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFG--KQDE--ETLQVCKGDTRNPKDLDPAIFEGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~--~~~~--~~~~~v~~Di~d~~~v~~~~~~~~d~li 156 (214)
++|+||||||+|+||++++++|+++|++|++++|+.+..+.... .+.. .+++++.+|++|.+++++ ++.++|+||
T Consensus 4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~-~~~~~d~Vi 82 (337)
T 2c29_D 4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDE-AIKGCTGVF 82 (337)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHH-HHTTCSEEE
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHH-HHcCCCEEE
Confidence 57899999999999999999999999999999998763322111 1111 257889999999999987 468899999
Q ss_pred eccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cC-CCeEEEEccccccc
Q 028043 157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SS-LKRIVLVSSVGVTK 207 (214)
Q Consensus 157 ~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~-~~~iV~vSS~~~~~ 207 (214)
|+||.... ...+.....+++|+.|+.+++++++ .+ .++||++||.++++
T Consensus 83 h~A~~~~~--~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~ 133 (337)
T 2c29_D 83 HVATPMDF--ESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVN 133 (337)
T ss_dssp ECCCCCCS--SCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTS
T ss_pred EeccccCC--CCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcc
Confidence 99986521 1111112467999999999999885 35 78999999998543
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.4e-20 Score=153.81 Aligned_cols=123 Identities=15% Similarity=0.087 Sum_probs=98.2
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
+++++|+++||||+||||++++++|+++|++|++++|+++. + ..++.++.+|++|++++++++ +++
T Consensus 3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~-----~---~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~ 74 (250)
T 2fwm_X 3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ-----E---QYPFATEVMDVADAAQVAQVCQRLLAETER 74 (250)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS-----S---CCSSEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh-----h---cCCceEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 45678999999999999999999999999999999998652 1 123778999999999988643 458
Q ss_pred CcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
+|+||||||...... ...+++...+++|+.|+.++++++ +.+.++||++||.+++.+
T Consensus 75 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~ 139 (250)
T 2fwm_X 75 LDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTP 139 (250)
T ss_dssp CCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCC
Confidence 999999999865221 122334567899999999999877 235789999999988654
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.83 E-value=2e-20 Score=156.63 Aligned_cols=127 Identities=16% Similarity=0.216 Sum_probs=100.8
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhccc-------CCCCEEEEEecCCChhccchhh--
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ-------DEETLQVCKGDTRNPKDLDPAI-- 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~-------~~~~~~~v~~Di~d~~~v~~~~-- 148 (214)
..+++|+|+||||+||||++++++|+++|++|++++|+.++++++.+++ .+.++.++.+|++|++++++++
T Consensus 14 ~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 93 (303)
T 1yxm_A 14 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS 93 (303)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHH
Confidence 4567899999999999999999999999999999999988776654432 2457889999999999988643
Q ss_pred ----hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhcc-----CCCeEEEEcccc
Q 028043 149 ----FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS-----SLKRIVLVSSVG 204 (214)
Q Consensus 149 ----~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~-----~~~~iV~vSS~~ 204 (214)
++++|+||||||...... ...++....+++|+.|+.++++++.+ +.++||++||.+
T Consensus 94 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~ 161 (303)
T 1yxm_A 94 TLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT 161 (303)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC
T ss_pred HHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec
Confidence 457999999999754211 12223355679999999999998632 357899999987
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.83 E-value=2.5e-21 Score=164.13 Aligned_cols=131 Identities=13% Similarity=0.098 Sum_probs=101.9
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcC----------hhHHHHHhcccC--CCCEEEEEecCCChhccc
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD----------PEKATTLFGKQD--EETLQVCKGDTRNPKDLD 145 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~----------~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~ 145 (214)
..+++|+++||||+||||++++++|+++|++|++++|+ .+..+++.+++. +.++.++.+|++|+++++
T Consensus 23 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~ 102 (322)
T 3qlj_A 23 GVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAA 102 (322)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHH
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHH
Confidence 45678999999999999999999999999999999987 555555444332 456788999999999988
Q ss_pred hhh------hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhcc-------C----CCeEEEEccccc
Q 028043 146 PAI------FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS-------S----LKRIVLVSSVGV 205 (214)
Q Consensus 146 ~~~------~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~-------~----~~~iV~vSS~~~ 205 (214)
+++ ++++|+||||||...... ...+++...+++|+.|++++++++.+ . .++||++||.++
T Consensus 103 ~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~ 182 (322)
T 3qlj_A 103 GLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAG 182 (322)
T ss_dssp HHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHH
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHH
Confidence 643 468999999999875321 22334466789999999999987621 0 259999999887
Q ss_pred ccc
Q 028043 206 TKF 208 (214)
Q Consensus 206 ~~~ 208 (214)
+.+
T Consensus 183 ~~~ 185 (322)
T 3qlj_A 183 LQG 185 (322)
T ss_dssp HHC
T ss_pred ccC
Confidence 643
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=7.9e-21 Score=155.88 Aligned_cols=130 Identities=15% Similarity=0.098 Sum_probs=101.9
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHH---CCCeEEEEEcChhHHHHHhcccC----CCCEEEEEecCCChhccchhh---
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLS---RNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAI--- 148 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~---~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~v~~Di~d~~~v~~~~--- 148 (214)
.+++|+++||||+||||++++++|++ +|++|++++|++++++++.+++. +.++.++.+|++|++++++++
T Consensus 3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 82 (259)
T 1oaa_A 3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV 82 (259)
T ss_dssp CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHH
Confidence 35689999999999999999999999 89999999999988776654432 346888999999999887633
Q ss_pred -----hCCCc--EEEeccCCCCCC---C---CCCCCCCchhHHHHHHHHHHHHHhcc-------CCCeEEEEcccccccc
Q 028043 149 -----FEGVT--HVICCTGTTAFP---S---RRWDGDNTPEKVDWEGVRNLVSALPS-------SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 -----~~~~d--~li~~Ag~~~~~---~---~~~~~~~~~~~vNv~g~~~l~~a~~~-------~~~~iV~vSS~~~~~~ 208 (214)
++++| +||||||..... . ...+++...+++|+.|++++++++.+ +.++||++||.+++.+
T Consensus 83 ~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 162 (259)
T 1oaa_A 83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP 162 (259)
T ss_dssp HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC
T ss_pred HhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCC
Confidence 23678 999999985421 1 12234466789999999999998722 2357999999988654
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.83 E-value=8e-21 Score=161.32 Aligned_cols=130 Identities=18% Similarity=0.150 Sum_probs=96.7
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCC--CeEEEEEcChh--HHHHHhcccCCCCEEEEEecCCChhccchhhhC--C
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPE--KATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--G 151 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G--~~V~~~~r~~~--~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~--~ 151 (214)
+.+++|+|+||||+|+||++++++|+++| ++|++++|... ..+.+.......+++++.+|++|.++++++ +. +
T Consensus 20 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~~ 98 (346)
T 4egb_A 20 FQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHV-IKERD 98 (346)
T ss_dssp ----CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHH-HHHHT
T ss_pred cccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHH-HhhcC
Confidence 44567899999999999999999999999 67888887642 222222222245799999999999999875 44 4
Q ss_pred CcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccccccccC
Q 028043 152 VTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~~ 209 (214)
+|+|||+||.... ...+++....+++|+.|+.+++++++ .+.++||++||.++|+..
T Consensus 99 ~d~Vih~A~~~~~-~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~ 156 (346)
T 4egb_A 99 VQVIVNFAAESHV-DRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSL 156 (346)
T ss_dssp CCEEEECCCCC----------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCC
T ss_pred CCEEEECCcccch-hhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCC
Confidence 9999999998753 22345667788999999999999984 578899999999998764
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.83 E-value=1.5e-20 Score=155.78 Aligned_cols=129 Identities=20% Similarity=0.219 Sum_probs=99.2
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC----CCCEEEEEecCCChhccchhh------
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
.+++|+++||||+||||++++++|+++|++|++++|++++++++.+++. ...+.++.+|++|++++++++
T Consensus 29 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 108 (279)
T 1xg5_A 29 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ 108 (279)
T ss_dssp GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence 3678999999999999999999999999999999999887766544332 235788999999999887643
Q ss_pred hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHH----hc-cCC--CeEEEEccccccc
Q 028043 149 FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSA----LP-SSL--KRIVLVSSVGVTK 207 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a----~~-~~~--~~iV~vSS~~~~~ 207 (214)
++++|+||||||...... ...++....+++|+.|+.+++++ ++ .+. ++||++||.+++.
T Consensus 109 ~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~ 177 (279)
T 1xg5_A 109 HSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHR 177 (279)
T ss_dssp HCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTS
T ss_pred CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcc
Confidence 358999999999865221 12223456779999996665554 33 343 7999999998863
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.83 E-value=9.8e-21 Score=156.49 Aligned_cols=129 Identities=20% Similarity=0.217 Sum_probs=100.7
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEE-EcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLL-LRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~-~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
.++|+++||||+||||++++++|+++|++|+++ .|+.+..+++.+.+. +.++.++.+|++|++++++++ ++
T Consensus 24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 103 (272)
T 4e3z_A 24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFG 103 (272)
T ss_dssp CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 357899999999999999999999999999887 677777666544332 456889999999999988643 46
Q ss_pred CCcEEEeccCCCCCCC----CCCCCCCchhHHHHHHHHHHHHHhc----c----CCCeEEEEcccccccc
Q 028043 151 GVTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSALP----S----SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~----~~~~~~~~~~~vNv~g~~~l~~a~~----~----~~~~iV~vSS~~~~~~ 208 (214)
++|+||||||....+. ...++..+.+++|+.|+.++++++. + ..++||++||.+++..
T Consensus 104 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 173 (272)
T 4e3z_A 104 RLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILG 173 (272)
T ss_dssp CCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHC
T ss_pred CCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccC
Confidence 8999999999865311 1233446678999999999988762 1 3468999999887654
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.1e-20 Score=156.74 Aligned_cols=131 Identities=15% Similarity=0.186 Sum_probs=103.6
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh-----hCCC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-----FEGV 152 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~-----~~~~ 152 (214)
+++++|+++||||+||||++++++|+++|++|++++|+.++++++.+++ +.++.++++|++|.+++++++ ++++
T Consensus 26 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~i 104 (281)
T 3ppi_A 26 KQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL-GNRAEFVSTNVTSEDSVLAAIEAANQLGRL 104 (281)
T ss_dssp GGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-CTTEEEEECCTTCHHHHHHHHHHHTTSSEE
T ss_pred hccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-CCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 4567899999999999999999999999999999999999888876666 457899999999999988743 3579
Q ss_pred cEEEec-cCCCCCCC--------CCCCCCCchhHHHHHHHHHHHHHhc-----------cCCCeEEEEccccccccC
Q 028043 153 THVICC-TGTTAFPS--------RRWDGDNTPEKVDWEGVRNLVSALP-----------SSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 153 d~li~~-Ag~~~~~~--------~~~~~~~~~~~vNv~g~~~l~~a~~-----------~~~~~iV~vSS~~~~~~~ 209 (214)
|++||| ||...... ...+...+.+++|+.|+.++++++. .+.++||++||.+++.+.
T Consensus 105 d~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 181 (281)
T 3ppi_A 105 RYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQ 181 (281)
T ss_dssp EEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCC
T ss_pred CeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCC
Confidence 999999 55543211 1112235677999999999998762 234589999999887543
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.83 E-value=1e-20 Score=151.19 Aligned_cols=111 Identities=21% Similarity=0.334 Sum_probs=95.3
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCC-hhccchhhhCCCcEEEeccCC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN-PKDLDPAIFEGVTHVICCTGT 161 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d-~~~v~~~~~~~~d~li~~Ag~ 161 (214)
|+|+||||+|+||++++++|+++|++|++++|++++.+.. .+++++.+|++| ++++++ +++++|+||||||.
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~~~~~D~~d~~~~~~~-~~~~~d~vi~~ag~ 73 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY------NNVKAVHFDVDWTPEEMAK-QLHGMDAIINVSGS 73 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC------TTEEEEECCTTSCHHHHHT-TTTTCSEEEECCCC
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc------CCceEEEecccCCHHHHHH-HHcCCCEEEECCcC
Confidence 4799999999999999999999999999999998765432 568999999999 999987 47899999999997
Q ss_pred CCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccccccccC
Q 028043 162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 162 ~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~~ 209 (214)
.. ...+++|+.++.+++++++ .+.++||++||.+++...
T Consensus 74 ~~---------~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~ 113 (219)
T 3dqp_A 74 GG---------KSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPE 113 (219)
T ss_dssp TT---------SSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCGG
T ss_pred CC---------CCcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCCC
Confidence 64 1256889999999999985 577899999998876543
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.83 E-value=8.3e-21 Score=156.26 Aligned_cols=129 Identities=16% Similarity=0.186 Sum_probs=101.4
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEc-ChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-DPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r-~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
+.+++|+++||||+||||++++++|+++|++|++++| +++..+++.+++. +.++.++.+|++|++++++++
T Consensus 17 ~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 96 (274)
T 1ja9_A 17 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH 96 (274)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 4567899999999999999999999999999999999 7776665544332 456888999999999887643
Q ss_pred hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEcccccc
Q 028043 149 FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVT 206 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~ 206 (214)
++++|+||||||...... ...++....+++|+.|+.++++++.+ ..++||++||.+++
T Consensus 97 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~ 160 (274)
T 1ja9_A 97 FGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAV 160 (274)
T ss_dssp HSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGT
T ss_pred cCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhc
Confidence 358999999999864211 12223356779999999999987732 12799999999886
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=99.83 E-value=7e-21 Score=154.30 Aligned_cols=126 Identities=20% Similarity=0.192 Sum_probs=98.8
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEE-EcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCCC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLL-LRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~-~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
+|+++||||+||||++++++|+++|++|+++ +|+++..+++.+++. +.++.++.+|++|++++++++ ++++
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 80 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI 80 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 5899999999999999999999999999995 788877665544332 346888999999999888643 3589
Q ss_pred cEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEccccccc
Q 028043 153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 153 d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~ 207 (214)
|+||||||...... ...++..+.+++|+.|+.++++++. .+.++||++||.+++.
T Consensus 81 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~ 143 (244)
T 1edo_A 81 DVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLI 143 (244)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH
T ss_pred CEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcC
Confidence 99999999865321 1222345677999999999998772 3568999999987654
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=99.83 E-value=1.2e-20 Score=157.03 Aligned_cols=130 Identities=18% Similarity=0.143 Sum_probs=101.3
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC---CCCEEEEEecCCChhccchhh------h
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
.+++|+++||||+||||++++++|+++|++|++++|++++++++.+++. ..++.++.+|++|.+++++++ +
T Consensus 25 ~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 104 (286)
T 1xu9_A 25 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM 104 (286)
T ss_dssp GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred hcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 4678999999999999999999999999999999999988776544331 236888999999999887643 4
Q ss_pred CCCcEEEec-cCCCCCCC--CCCCCCCchhHHHHHHHHHHHHHhc----cCCCeEEEEcccccccc
Q 028043 150 EGVTHVICC-TGTTAFPS--RRWDGDNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 150 ~~~d~li~~-Ag~~~~~~--~~~~~~~~~~~vNv~g~~~l~~a~~----~~~~~iV~vSS~~~~~~ 208 (214)
+++|+|||| ||....+. ...++....+++|+.|+.++++++. .+.++||++||.+++.+
T Consensus 105 g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~ 170 (286)
T 1xu9_A 105 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVA 170 (286)
T ss_dssp TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSC
T ss_pred CCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccC
Confidence 689999999 57654221 1122335567999999999998762 24579999999987654
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=8.3e-21 Score=156.53 Aligned_cols=131 Identities=18% Similarity=0.157 Sum_probs=100.4
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEE-EcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLL-LRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~-~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
.++++|+++||||+||||++++++|+++|++|+++ .|+.+..++..+.+. +.++.++.+|++|++++++++
T Consensus 22 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 101 (267)
T 4iiu_A 22 SNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQ 101 (267)
T ss_dssp ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 34578999999999999999999999999999775 466666655444332 457889999999999988643
Q ss_pred hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh------ccCCCeEEEEcccccccc
Q 028043 149 FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL------PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~------~~~~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||...... ...++....+++|+.|+.++++++ +.+.++||++||.+++.+
T Consensus 102 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~ 170 (267)
T 4iiu_A 102 HGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMG 170 (267)
T ss_dssp HCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHC
T ss_pred hCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccC
Confidence 458999999999875321 223344667899999999999876 345679999999887644
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.83 E-value=1.5e-20 Score=154.49 Aligned_cols=128 Identities=20% Similarity=0.282 Sum_probs=96.7
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhH-HHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-ATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~-~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
..++|+++||||+||||++++++|+++|++|++++|+.+. .+.+.+... +.++.++++|++|++++++++ +
T Consensus 4 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 83 (264)
T 3i4f_A 4 GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHF 83 (264)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred ccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence 3467999999999999999999999999999999776543 333332222 356889999999999988743 4
Q ss_pred CCCcEEEeccCCCCCCC-----CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccc
Q 028043 150 EGVTHVICCTGTTAFPS-----RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVT 206 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~-----~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~ 206 (214)
+++|+||||||...... ...++....+++|+.|+.++++++ +.+.++||++||.+++
T Consensus 84 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~ 150 (264)
T 3i4f_A 84 GKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGAD 150 (264)
T ss_dssp SCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGG
T ss_pred CCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhc
Confidence 58999999999532111 122334567899999999999976 2356899999998554
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.83 E-value=1.4e-20 Score=160.18 Aligned_cols=129 Identities=11% Similarity=0.070 Sum_probs=101.0
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEE-cChhHHHHHhcccC---CCCEEEEEecCCChh-------------
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLL-RDPEKATTLFGKQD---EETLQVCKGDTRNPK------------- 142 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~-r~~~~~~~~~~~~~---~~~~~~v~~Di~d~~------------- 142 (214)
+++|+++||||+||||++++++|+++|++|++++ |++++++++.+++. +.++.++.+|++|++
T Consensus 44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 123 (328)
T 2qhx_A 44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV 123 (328)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCB
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccccccc
Confidence 6789999999999999999999999999999999 99888776654432 456889999999998
Q ss_pred ----ccchhh------hCCCcEEEeccCCCCCCC-C--C--------------CCCCCchhHHHHHHHHHHHHHhc----
Q 028043 143 ----DLDPAI------FEGVTHVICCTGTTAFPS-R--R--------------WDGDNTPEKVDWEGVRNLVSALP---- 191 (214)
Q Consensus 143 ----~v~~~~------~~~~d~li~~Ag~~~~~~-~--~--------------~~~~~~~~~vNv~g~~~l~~a~~---- 191 (214)
++++++ ++++|+||||||...... . . .++....+++|+.|++++++++.
T Consensus 124 ~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~ 203 (328)
T 2qhx_A 124 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVA 203 (328)
T ss_dssp CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 776532 468999999999865321 1 1 12234567999999999998762
Q ss_pred -cC------CCeEEEEcccccccc
Q 028043 192 -SS------LKRIVLVSSVGVTKF 208 (214)
Q Consensus 192 -~~------~~~iV~vSS~~~~~~ 208 (214)
.+ .++||++||.+++.+
T Consensus 204 ~~~~~~~~~~g~IV~isS~~~~~~ 227 (328)
T 2qhx_A 204 GTPAKHRGTNYSIINMVDAMTNQP 227 (328)
T ss_dssp HSCGGGSCSCEEEEEECCTTTTSC
T ss_pred hcCCcCCCCCcEEEEECchhhccC
Confidence 23 579999999987654
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.83 E-value=1e-20 Score=155.01 Aligned_cols=131 Identities=18% Similarity=0.214 Sum_probs=99.7
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC---CCCEEEEEecCCChhccchhh------
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
+.+++|+++||||+||||++++++|+++|++|++++|+.++.++..+++. +.++.++.+|++|++++++++
T Consensus 10 ~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 89 (265)
T 1h5q_A 10 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDAD 89 (265)
T ss_dssp ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHh
Confidence 45678999999999999999999999999999999997554433222211 356889999999999887643
Q ss_pred hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cC-CCeEEEEcccccccc
Q 028043 149 FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SS-LKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~-~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||...... ...++....+++|+.|+.++++++. .+ .++||++||.+++..
T Consensus 90 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~ 158 (265)
T 1h5q_A 90 LGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQII 158 (265)
T ss_dssp SCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC
T ss_pred cCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhcc
Confidence 457999999999865321 1223345567999999999999762 22 478999999887543
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.5e-20 Score=157.58 Aligned_cols=131 Identities=9% Similarity=0.038 Sum_probs=101.5
Q ss_pred CCCCCCEEEEEcCch--HHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC-CCCEEEEEecCCChhccchhh------
Q 028043 78 PASSSKLVLVAGGSG--GVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 78 ~~~~~k~vlITGasg--gIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
+.+++|+++||||+| |||++++++|+++|++|++++|+++..+.+.+... ...+.++++|++|++++++++
T Consensus 26 ~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 105 (296)
T 3k31_A 26 MLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEE 105 (296)
T ss_dssp CTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred hccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 457789999999997 99999999999999999999999754433322111 124678999999999988743
Q ss_pred hCCCcEEEeccCCCCC-----C--CCCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEcccccccc
Q 028043 149 FEGVTHVICCTGTTAF-----P--SRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~-----~--~~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||+... + ....+++...+++|+.|++++++++.+ ..++||++||.+++.+
T Consensus 106 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~ 175 (296)
T 3k31_A 106 WGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKV 175 (296)
T ss_dssp HSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSC
T ss_pred cCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccC
Confidence 4689999999998642 1 123344567789999999999998843 2458999999988654
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=5.6e-21 Score=161.56 Aligned_cols=127 Identities=17% Similarity=0.107 Sum_probs=98.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHH--HHhcccCCCCEEEEEecCCChhccchhhhC-CCcEEEe
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKAT--TLFGKQDEETLQVCKGDTRNPKDLDPAIFE-GVTHVIC 157 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~-~~d~li~ 157 (214)
++|+|+||||+|+||++++++|+++|++|++++|+++..+ .+.......+++++.+|++|.+++++++-+ ++|+|||
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 81 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVYN 81 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence 4689999999999999999999999999999999875432 121111134688999999999998875322 5899999
Q ss_pred ccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CC-CeEEEEcccccccc
Q 028043 158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL-KRIVLVSSVGVTKF 208 (214)
Q Consensus 158 ~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~-~~iV~vSS~~~~~~ 208 (214)
|||.... ....++....+++|+.|+.++++++.+ +. ++||++||.++|+.
T Consensus 82 ~A~~~~~-~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~ 133 (345)
T 2z1m_A 82 LAAQSFV-GVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGK 133 (345)
T ss_dssp CCCCCCH-HHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCS
T ss_pred CCCCcch-hhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCC
Confidence 9997642 112245566789999999999998853 55 89999999998864
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=7.7e-21 Score=155.98 Aligned_cols=127 Identities=18% Similarity=0.227 Sum_probs=100.6
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHH-CCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLS-RNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~-~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
++|+|+||||+||||++++++|++ +|++|++++|+.++.++..+.+. +.++.++.+|++|.+++++++ +++
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 82 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG 82 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 578999999999999999999999 99999999999887766544332 346788999999999887643 358
Q ss_pred CcEEEeccCCCCCCCCC---CCCCCchhHHHHHHHHHHHHHhccC---CCeEEEEccccccc
Q 028043 152 VTHVICCTGTTAFPSRR---WDGDNTPEKVDWEGVRNLVSALPSS---LKRIVLVSSVGVTK 207 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~~~---~~~~~~~~~vNv~g~~~l~~a~~~~---~~~iV~vSS~~~~~ 207 (214)
+|+||||||........ .++....+++|+.|+.++++++.+. .++||++||.+++.
T Consensus 83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~ 144 (276)
T 1wma_A 83 LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVR 144 (276)
T ss_dssp EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHH
T ss_pred CCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhc
Confidence 99999999986532211 1233556799999999999988542 35999999988763
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.83 E-value=7.6e-20 Score=146.08 Aligned_cols=110 Identities=18% Similarity=0.203 Sum_probs=93.3
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccCCC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT 162 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag~~ 162 (214)
|+|+||||+|+||++++++|+++|++|++++|++++.+++. ..+++++.+|++|+++ + .++++|+||||||..
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~----~~~~~~~~~D~~d~~~--~-~~~~~d~vi~~ag~~ 73 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL----GATVATLVKEPLVLTE--A-DLDSVDAVVDALSVP 73 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT----CTTSEEEECCGGGCCH--H-HHTTCSEEEECCCCC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc----CCCceEEecccccccH--h-hcccCCEEEECCccC
Confidence 47999999999999999999999999999999998877654 3578999999999887 3 478999999999986
Q ss_pred CCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CCCeEEEEcccccccc
Q 028043 163 AFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 163 ~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~~~iV~vSS~~~~~~ 208 (214)
. .. ....+|+.++.++++++++ + +++|++||.++++.
T Consensus 74 ~------~~--~~~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~~~~~ 111 (224)
T 3h2s_A 74 W------GS--GRGYLHLDFATHLVSLLRNSD-TLAVFILGSASLAM 111 (224)
T ss_dssp T------TS--SCTHHHHHHHHHHHHTCTTCC-CEEEEECCGGGSBC
T ss_pred C------Cc--chhhHHHHHHHHHHHHHHHcC-CcEEEEecceeecc
Confidence 2 11 1257899999999999964 6 99999999876653
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.83 E-value=2.4e-20 Score=151.12 Aligned_cols=127 Identities=22% Similarity=0.185 Sum_probs=101.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCC--CeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hC--
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FE-- 150 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~-- 150 (214)
++|+++||||+||||++++++|+++| ++|++++|++++.+++.+. .+.++.++.+|++|++++++++ ++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 80 (250)
T 1yo6_A 2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI-KDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD 80 (250)
T ss_dssp CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTC-CCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhc-cCCceEEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence 57899999999999999999999999 9999999998877666443 3457899999999999887643 23
Q ss_pred CCcEEEeccCCCC-CCC---CCCCCCCchhHHHHHHHHHHHHHhc-----c------C-----CCeEEEEcccccccc
Q 028043 151 GVTHVICCTGTTA-FPS---RRWDGDNTPEKVDWEGVRNLVSALP-----S------S-----LKRIVLVSSVGVTKF 208 (214)
Q Consensus 151 ~~d~li~~Ag~~~-~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~------~-----~~~iV~vSS~~~~~~ 208 (214)
++|+||||||... ... ...++....+++|+.|+.++++++. . + .++||++||..++..
T Consensus 81 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~ 158 (250)
T 1yo6_A 81 GLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSIT 158 (250)
T ss_dssp CCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCST
T ss_pred CCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccC
Confidence 8999999999865 211 1122345677899999999998762 1 3 689999999987654
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.7e-20 Score=154.24 Aligned_cols=128 Identities=16% Similarity=0.127 Sum_probs=99.5
Q ss_pred CCCCCEEEEEcCc--hHHHHHHHHHHHHCCCeEEEEEcChh---HHHHHhcccCCCCEEEEEecCCChhccchhh-----
Q 028043 79 ASSSKLVLVAGGS--GGVGQLVVASLLSRNIKSRLLLRDPE---KATTLFGKQDEETLQVCKGDTRNPKDLDPAI----- 148 (214)
Q Consensus 79 ~~~~k~vlITGas--ggIG~~la~~L~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~----- 148 (214)
.+++|+++||||+ ||||++++++|+++|++|++++|+++ ..+++.+.. ..+.++.+|++|++++++++
T Consensus 5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (261)
T 2wyu_A 5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEAL--GGALLFRADVTQDEELDALFAGVKE 82 (261)
T ss_dssp CCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHT--TCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCcEEEECCCCCHHHHHHHHHHHHH
Confidence 4578999999999 99999999999999999999999875 333333222 23678999999999887643
Q ss_pred -hCCCcEEEeccCCCCC-----C--CCCCCCCCchhHHHHHHHHHHHHHhccC---CCeEEEEcccccccc
Q 028043 149 -FEGVTHVICCTGTTAF-----P--SRRWDGDNTPEKVDWEGVRNLVSALPSS---LKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 -~~~~d~li~~Ag~~~~-----~--~~~~~~~~~~~~vNv~g~~~l~~a~~~~---~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||.... + ....++++..+++|+.|+.++++++.+. .++||++||.+++.+
T Consensus 83 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~ 153 (261)
T 2wyu_A 83 AFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKV 153 (261)
T ss_dssp HHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSB
T ss_pred HcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCC
Confidence 4589999999998642 1 1223344667899999999999988543 368999999887654
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=99.82 E-value=7.7e-21 Score=157.34 Aligned_cols=131 Identities=18% Similarity=0.219 Sum_probs=98.9
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
+++++|+++||||+||||++++++|+++|++|++++|+.+..+++.+.+. +.++.++.+|++|++++++++ +
T Consensus 30 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 109 (279)
T 3ctm_A 30 FSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDF 109 (279)
T ss_dssp GCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHh
Confidence 34678999999999999999999999999999999998766554433221 346889999999999887643 4
Q ss_pred CCCcEEEeccCCCCC-CC----CCCCCCCchhHHHHHHHHHHHHHh----c-cCCCeEEEEcccccccc
Q 028043 150 EGVTHVICCTGTTAF-PS----RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~-~~----~~~~~~~~~~~vNv~g~~~l~~a~----~-~~~~~iV~vSS~~~~~~ 208 (214)
+++|+||||||.... .. ...++..+.+++|+.|+.++++++ + .+.++||++||.+++..
T Consensus 110 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~ 178 (279)
T 3ctm_A 110 GTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIV 178 (279)
T ss_dssp SCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC
T ss_pred CCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccC
Confidence 579999999998642 11 111223456789999976665543 3 46789999999987644
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=6e-20 Score=144.41 Aligned_cols=115 Identities=24% Similarity=0.320 Sum_probs=95.7
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccCC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGT 161 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag~ 161 (214)
+|+|+||||+|+||++++++|+++|++|++++|++++.+.. ...+++++.+|++|++++++ ++.++|+|||+||.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~D~~~~~~~~~-~~~~~d~vi~~a~~ 77 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE----GPRPAHVVVGDVLQAADVDK-TVAGQDAVIVLLGT 77 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS----SCCCSEEEESCTTSHHHHHH-HHTTCSEEEECCCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc----cCCceEEEEecCCCHHHHHH-HHcCCCEEEECccC
Confidence 47999999999999999999999999999999998764322 13568899999999999987 47889999999997
Q ss_pred CCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccccccccC
Q 028043 162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 162 ~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~~ 209 (214)
... .+ ..++|+.++.+++++++ .+.++||++||.++++..
T Consensus 78 ~~~-----~~---~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~ 118 (206)
T 1hdo_A 78 RND-----LS---PTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDP 118 (206)
T ss_dssp TTC-----CS---CCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCT
T ss_pred CCC-----CC---ccchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCc
Confidence 642 11 13589999999999885 478899999999887653
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.8e-20 Score=158.84 Aligned_cols=123 Identities=16% Similarity=0.133 Sum_probs=95.5
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCC--CcEE
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEG--VTHV 155 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~--~d~l 155 (214)
..++||+|+||||+|+||++++++|+++|++|++++|+.....+....+ .+++++.+|++|+++++++ +.+ +|+|
T Consensus 17 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~--~~~~~~~~Dl~d~~~~~~~-~~~~~~D~v 93 (333)
T 2q1w_A 17 RGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDH--PNLTFVEGSIADHALVNQL-IGDLQPDAV 93 (333)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCC--TTEEEEECCTTCHHHHHHH-HHHHCCSEE
T ss_pred ecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhc--CCceEEEEeCCCHHHHHHH-HhccCCcEE
Confidence 3456899999999999999999999999999999999864322211111 4688999999999998874 554 9999
Q ss_pred EeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccccccc
Q 028043 156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 156 i~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~ 207 (214)
|||||..... ...+.. +++|+.|+.++++++. .+.++||++||.++|+
T Consensus 94 ih~A~~~~~~--~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g 142 (333)
T 2q1w_A 94 VHTAASYKDP--DDWYND--TLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYG 142 (333)
T ss_dssp EECCCCCSCT--TCHHHH--HHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGC
T ss_pred EECceecCCC--ccCChH--HHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhC
Confidence 9999986532 111222 7899999999999985 4778999999999987
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.2e-20 Score=152.83 Aligned_cols=126 Identities=15% Similarity=0.160 Sum_probs=97.4
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEE-EcChhHHHHHhcccC--CCCEEE-EEecCCChhccchhh------hCC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLL-LRDPEKATTLFGKQD--EETLQV-CKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~-~r~~~~~~~~~~~~~--~~~~~~-v~~Di~d~~~v~~~~------~~~ 151 (214)
||+++||||+||||++++++|+++|++|+++ +|++++.+++.+++. +.++.. +.+|++|.+++++++ +++
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG 80 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence 4799999999999999999999999999998 898887766544332 335566 899999999888643 468
Q ss_pred CcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEccccccc
Q 028043 152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTK 207 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~ 207 (214)
+|+||||||...... ...++....+++|+.|+.++++++ +.+.++||++||.+++.
T Consensus 81 ~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~ 144 (245)
T 2ph3_A 81 LDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGIL 144 (245)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhcc
Confidence 999999999864211 222334567899999988877755 23568999999987654
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.82 E-value=3.6e-21 Score=165.13 Aligned_cols=125 Identities=15% Similarity=0.148 Sum_probs=101.6
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHC-CCeEEEEEcChhHHHHHhcccCCCCEEEEEecCC-ChhccchhhhCCCcEE
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTR-NPKDLDPAIFEGVTHV 155 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~-d~~~v~~~~~~~~d~l 155 (214)
..+++|+|+||||+|+||++++++|+++ |++|++++|++++.+.+.. ..+++++.+|++ |.+.+++ ++.++|+|
T Consensus 20 ~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~---~~~v~~~~~Dl~~d~~~~~~-~~~~~d~V 95 (372)
T 3slg_A 20 GSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK---HERMHFFEGDITINKEWVEY-HVKKCDVI 95 (372)
T ss_dssp ---CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG---STTEEEEECCTTTCHHHHHH-HHHHCSEE
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc---CCCeEEEeCccCCCHHHHHH-HhccCCEE
Confidence 3456799999999999999999999998 9999999999876555432 357999999999 9998887 46789999
Q ss_pred EeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEcccccccc
Q 028043 156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 156 i~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~ 208 (214)
||+||..... ..++++...+++|+.|+.+++++++ .+ +++|++||.++|+.
T Consensus 96 ih~A~~~~~~-~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS~~vyg~ 147 (372)
T 3slg_A 96 LPLVAIATPA-TYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGM 147 (372)
T ss_dssp EECBCCCCHH-HHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECCGGGGBS
T ss_pred EEcCccccHH-HHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCcHHHhCC
Confidence 9999986521 1123445677999999999999985 46 99999999999875
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=99.82 E-value=8.8e-21 Score=154.87 Aligned_cols=121 Identities=19% Similarity=0.215 Sum_probs=94.4
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
..+++|+++||||+||||++++++|+++|++|++++|++++.+++ ..+.+|++|++++++++ +++
T Consensus 11 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---------~~~~~D~~~~~~~~~~~~~~~~~~g~ 81 (247)
T 1uzm_A 11 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGL---------FGVEVDVTDSDAVDRAFTAVEEHQGP 81 (247)
T ss_dssp CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTS---------EEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHh---------cCeeccCCCHHHHHHHHHHHHHHcCC
Confidence 456789999999999999999999999999999999987654322 23789999999887643 468
Q ss_pred CcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEccccccc
Q 028043 152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~ 207 (214)
+|+||||||...... ...++.+..+++|+.|+.++++++. .+.++||++||.+++.
T Consensus 82 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~ 145 (247)
T 1uzm_A 82 VEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLW 145 (247)
T ss_dssp CSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC--
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhcc
Confidence 999999999865211 2223446678999999999999762 3568999999997754
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=4.4e-20 Score=153.33 Aligned_cols=129 Identities=9% Similarity=0.126 Sum_probs=102.2
Q ss_pred CCCCCCEEEEEcCc--hHHHHHHHHHHHHCCCeEEEEEcCh--hHHHHHhcccCCCCEEEEEecCCChhccchhh-----
Q 028043 78 PASSSKLVLVAGGS--GGVGQLVVASLLSRNIKSRLLLRDP--EKATTLFGKQDEETLQVCKGDTRNPKDLDPAI----- 148 (214)
Q Consensus 78 ~~~~~k~vlITGas--ggIG~~la~~L~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~----- 148 (214)
..+++|+++||||+ +|||++++++|+++|++|++++|+. +.++++.+.. .++.++.+|++|++++++++
T Consensus 22 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~ 99 (280)
T 3nrc_A 22 GFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEF--NPAAVLPCDVISDQEIKDLFVELGK 99 (280)
T ss_dssp CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGG--CCSEEEECCTTCHHHHHHHHHHHHH
T ss_pred cccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhc--CCceEEEeecCCHHHHHHHHHHHHH
Confidence 45678999999998 6699999999999999999999987 5556555443 34788999999999988743
Q ss_pred -hCCCcEEEeccCCCCCC---C-----CCCCCCCchhHHHHHHHHHHHHHhc----cCCCeEEEEcccccccc
Q 028043 149 -FEGVTHVICCTGTTAFP---S-----RRWDGDNTPEKVDWEGVRNLVSALP----SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 -~~~~d~li~~Ag~~~~~---~-----~~~~~~~~~~~vNv~g~~~l~~a~~----~~~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||..... . ...++....+++|+.|+.++++++. +..++||++||.+++.+
T Consensus 100 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~ 172 (280)
T 3nrc_A 100 VWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKA 172 (280)
T ss_dssp HCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSC
T ss_pred HcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccC
Confidence 46899999999987521 0 2223445678999999999999762 34679999999988654
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.8e-20 Score=161.71 Aligned_cols=125 Identities=14% Similarity=-0.017 Sum_probs=100.8
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
..++|+|+||||+|+||++++++|+++|++|++++|++....... ..+++++.+|++|.++++++ +.++|+|||+
T Consensus 26 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~v~~~~~Dl~d~~~~~~~-~~~~d~Vih~ 100 (379)
T 2c5a_A 26 PSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTED----MFCDEFHLVDLRVMENCLKV-TEGVDHVFNL 100 (379)
T ss_dssp TTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGG----GTCSEEEECCTTSHHHHHHH-HTTCSEEEEC
T ss_pred cccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhc----cCCceEEECCCCCHHHHHHH-hCCCCEEEEC
Confidence 346789999999999999999999999999999999875432211 24678899999999999874 6899999999
Q ss_pred cCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEcccccccc
Q 028043 159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 159 Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~ 208 (214)
||.........++....+++|+.|+.+++++++ .+.++||++||.++|+.
T Consensus 101 A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~ 151 (379)
T 2c5a_A 101 AADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPE 151 (379)
T ss_dssp CCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCG
T ss_pred ceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCC
Confidence 997642111124556678999999999999985 57789999999988864
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.82 E-value=3.9e-20 Score=156.56 Aligned_cols=120 Identities=26% Similarity=0.389 Sum_probs=91.3
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHH---HhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATT---LFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~---~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
+|+||||||+|+||++++++|+++|++|+++.|+.+..+. +.......+++++++|++|++++++ ++.++|+|||+
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~-~~~~~D~Vih~ 87 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEA-PIAGCDFVFHV 87 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHH-HHTTCSEEEEE
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHH-HHcCCCEEEEe
Confidence 6899999999999999999999999999999998653211 1110012468889999999999987 46889999999
Q ss_pred cCCCCCCCCCCCCC-CchhHHHHHHHHHHHHHhc-cC-CCeEEEEccccc
Q 028043 159 TGTTAFPSRRWDGD-NTPEKVDWEGVRNLVSALP-SS-LKRIVLVSSVGV 205 (214)
Q Consensus 159 Ag~~~~~~~~~~~~-~~~~~vNv~g~~~l~~a~~-~~-~~~iV~vSS~~~ 205 (214)
||..... ..++ .+.+++|+.|+.+++++++ .+ .++||++||.++
T Consensus 88 A~~~~~~---~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~ 134 (338)
T 2rh8_A 88 ATPVHFA---SEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAA 134 (338)
T ss_dssp SSCCCC------------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHH
T ss_pred CCccCCC---CCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHH
Confidence 9965321 1122 3478999999999999885 44 789999999874
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.82 E-value=3.4e-20 Score=154.32 Aligned_cols=127 Identities=13% Similarity=0.120 Sum_probs=98.6
Q ss_pred CCCCEEEEEcCc--hHHHHHHHHHHHHCCCeEEEEEcChh---HHHHHhcccCCCCEEEEEecCCChhccchhh------
Q 028043 80 SSSKLVLVAGGS--GGVGQLVVASLLSRNIKSRLLLRDPE---KATTLFGKQDEETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 80 ~~~k~vlITGas--ggIG~~la~~L~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
+++|+++||||+ ||||++++++|+++|++|++++|+++ ..+++.+.. ..+.++.+|++|++++++++
T Consensus 19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~ 96 (285)
T 2p91_A 19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGF--GSDLVVKCDVSLDEDIKNLKKFLEEN 96 (285)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHT--TCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 678999999999 99999999999999999999999875 233333222 23678999999999888643
Q ss_pred hCCCcEEEeccCCCCC-----C--CCCCCCCCchhHHHHHHHHHHHHHhcc----CCCeEEEEcccccccc
Q 028043 149 FEGVTHVICCTGTTAF-----P--SRRWDGDNTPEKVDWEGVRNLVSALPS----SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~-----~--~~~~~~~~~~~~vNv~g~~~l~~a~~~----~~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||.... + ....++....+++|+.|+.++++++.+ ..++||++||.+++.+
T Consensus 97 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~ 167 (285)
T 2p91_A 97 WGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKV 167 (285)
T ss_dssp TSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSB
T ss_pred cCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccC
Confidence 4689999999998642 1 122233456789999999999998743 2379999999887654
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.82 E-value=4.8e-20 Score=154.71 Aligned_cols=121 Identities=23% Similarity=0.349 Sum_probs=90.4
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEc-ChhHH---HHHhcccC--CCCEEEEEecCCChhccchhhhCCCcEE
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-DPEKA---TTLFGKQD--EETLQVCKGDTRNPKDLDPAIFEGVTHV 155 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r-~~~~~---~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~~~~~d~l 155 (214)
+|+||||||+|+||++++++|+++|++|++++| +++.. ..+. .+. ..+++++.+|++|++++++ ++.++|+|
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~-~~~~~d~v 78 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLT-NLPGASEKLHFFNADLSNPDSFAA-AIEGCVGI 78 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHH-TSTTHHHHEEECCCCTTCGGGGHH-HHTTCSEE
T ss_pred CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHH-hhhccCCceEEEecCCCCHHHHHH-HHcCCCEE
Confidence 579999999999999999999999999999998 65321 1111 111 1247788999999999987 46889999
Q ss_pred EeccCCCCCCCCCCCC-CCchhHHHHHHHHHHHHHhcc--CCCeEEEEccccccc
Q 028043 156 ICCTGTTAFPSRRWDG-DNTPEKVDWEGVRNLVSALPS--SLKRIVLVSSVGVTK 207 (214)
Q Consensus 156 i~~Ag~~~~~~~~~~~-~~~~~~vNv~g~~~l~~a~~~--~~~~iV~vSS~~~~~ 207 (214)
||+|+... ....+ ....+++|+.|+.++++++++ +.++||++||.++++
T Consensus 79 ih~A~~~~---~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~ 130 (322)
T 2p4h_X 79 FHTASPID---FAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVS 130 (322)
T ss_dssp EECCCCC-----------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTS
T ss_pred EEcCCccc---CCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcc
Confidence 99997532 11112 234789999999999999853 578999999988543
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=99.82 E-value=8.7e-20 Score=152.98 Aligned_cols=114 Identities=22% Similarity=0.209 Sum_probs=95.6
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccCC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGT 161 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag~ 161 (214)
+|+|+||||+|+||++++++|+++|++|++++|++...+ + .+++++.+|++ .+++.+ ++.++|+|||+||.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~------~~~~~~~~Dl~-~~~~~~-~~~~~d~Vih~a~~ 72 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-I------NDYEYRVSDYT-LEDLIN-QLNDVDAVVHLAAT 72 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC------------CCEEEECCCC-HHHHHH-HTTTCSEEEECCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-C------CceEEEEcccc-HHHHHH-hhcCCCEEEEcccc
Confidence 579999999999999999999999999999999844333 2 16789999999 999987 47899999999998
Q ss_pred CCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccccccccC
Q 028043 162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 162 ~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~~ 209 (214)
.... +....+++|+.++.+++++++ .+.++||++||.++|+..
T Consensus 73 ~~~~-----~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~ 116 (311)
T 3m2p_A 73 RGSQ-----GKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDE 116 (311)
T ss_dssp CCSS-----SCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCG
T ss_pred CCCC-----ChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCC
Confidence 7532 455678999999999999985 578899999999998753
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=2.9e-20 Score=155.61 Aligned_cols=119 Identities=13% Similarity=0.120 Sum_probs=97.3
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccCCC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT 162 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag~~ 162 (214)
|+|+||||+|+||++++++|+++|++|++++|+.+...+.. ..+++++.+|++|.+ +.++ +.+ |+|||+||..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~Dl~d~~-~~~~-~~~-d~vih~A~~~ 73 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV----NPSAELHVRDLKDYS-WGAG-IKG-DVVFHFAANP 73 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS----CTTSEEECCCTTSTT-TTTT-CCC-SEEEECCSSC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc----CCCceEEECccccHH-HHhh-cCC-CEEEECCCCC
Confidence 58999999999999999999999999999999876543322 456889999999998 7764 556 9999999965
Q ss_pred CCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccccccccC
Q 028043 163 AFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 163 ~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~~ 209 (214)
.. ....+++...+++|+.|+.+++++++ .+.++||++||.++|+..
T Consensus 74 ~~-~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~ 120 (312)
T 3ko8_A 74 EV-RLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDA 120 (312)
T ss_dssp SS-SGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSC
T ss_pred Cc-hhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCC
Confidence 42 22334556678999999999999984 578899999999998753
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=99.82 E-value=5.5e-20 Score=149.25 Aligned_cols=121 Identities=17% Similarity=0.258 Sum_probs=95.5
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCCcEE
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVTHV 155 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~d~l 155 (214)
+|+++||||+||||++++++|+++|++|++++|++++..+ ++ ++..+.+|++| +++++.+ ++++|+|
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~---~~---~~~~~~~D~~~-~~~~~~~~~~~~~~g~id~l 74 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQ---SL---GAVPLPTDLEK-DDPKGLVKRALEALGGLHVL 74 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHH---HH---TCEEEECCTTT-SCHHHHHHHHHHHHTSCCEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH---hh---CcEEEecCCch-HHHHHHHHHHHHHcCCCCEE
Confidence 5899999999999999999999999999999999876332 22 26788999999 8776532 5689999
Q ss_pred EeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEccccccccC
Q 028043 156 ICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 156 i~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~~ 209 (214)
|||||...... ...+++++.+++|+.|+.++++++ +.+.++||++||.+++...
T Consensus 75 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 136 (239)
T 2ekp_A 75 VHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAG 136 (239)
T ss_dssp EECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCC
Confidence 99999864221 122334567799999999999876 2356899999999887643
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=3.2e-20 Score=155.44 Aligned_cols=131 Identities=7% Similarity=0.026 Sum_probs=100.3
Q ss_pred CCCCCCEEEEEcCchH--HHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC-CCCEEEEEecCCChhccchhh------
Q 028043 78 PASSSKLVLVAGGSGG--VGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 78 ~~~~~k~vlITGasgg--IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
..+++|+++||||+|+ ||++++++|+++|++|++++|+++..+.+.+... ..++.++.+|++|++++++++
T Consensus 27 ~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 106 (293)
T 3grk_A 27 GLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKK 106 (293)
T ss_dssp CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHh
Confidence 3578899999999955 9999999999999999999999654333221111 235788999999999988743
Q ss_pred hCCCcEEEeccCCCCC-----C--CCCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEcccccccc
Q 028043 149 FEGVTHVICCTGTTAF-----P--SRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~-----~--~~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||.... + ....+++...+++|+.|++++++++.+ ..++||++||.+++.+
T Consensus 107 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~ 176 (293)
T 3grk_A 107 WGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKV 176 (293)
T ss_dssp TSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSB
T ss_pred cCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccC
Confidence 4689999999998641 1 123334566789999999999998733 3469999999988754
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=5.9e-20 Score=151.12 Aligned_cols=131 Identities=13% Similarity=0.130 Sum_probs=100.9
Q ss_pred CCCCCCEEEEEcCch--HHHHHHHHHHHHCCCeEEEEEcChhHHHH---HhcccCCCCEEEEEecCCChhccchhh----
Q 028043 78 PASSSKLVLVAGGSG--GVGQLVVASLLSRNIKSRLLLRDPEKATT---LFGKQDEETLQVCKGDTRNPKDLDPAI---- 148 (214)
Q Consensus 78 ~~~~~k~vlITGasg--gIG~~la~~L~~~G~~V~~~~r~~~~~~~---~~~~~~~~~~~~v~~Di~d~~~v~~~~---- 148 (214)
+++++|+++||||+| |||++++++|+++|++|++++|+....+. +.+.....++.++.+|++|++++++++
T Consensus 3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 82 (266)
T 3oig_A 3 FSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIK 82 (266)
T ss_dssp SCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHH
T ss_pred cccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHH
Confidence 356789999999995 59999999999999999999998654333 333333347889999999999988743
Q ss_pred --hCCCcEEEeccCCCCC----C---CCCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEcccccccc
Q 028043 149 --FEGVTHVICCTGTTAF----P---SRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 --~~~~d~li~~Ag~~~~----~---~~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||.... . ....+.....+++|+.|+.++++++.+ ..++||++||.+++.+
T Consensus 83 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~ 154 (266)
T 3oig_A 83 EQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELV 154 (266)
T ss_dssp HHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSC
T ss_pred HHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEeccccccc
Confidence 4689999999998641 1 122233456779999999999998844 2358999999988654
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=2.1e-20 Score=154.86 Aligned_cols=127 Identities=11% Similarity=0.122 Sum_probs=98.9
Q ss_pred CCCCEEEEEcCc--hHHHHHHHHHHHHCCCeEEEEEcChh---HHHHHhcccCCCCEEEEEecCCChhccchhh------
Q 028043 80 SSSKLVLVAGGS--GGVGQLVVASLLSRNIKSRLLLRDPE---KATTLFGKQDEETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 80 ~~~k~vlITGas--ggIG~~la~~L~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
+++|+++||||+ ||||++++++|+++|++|++++|+++ ..+++.+.. ..+.++.+|++|++++++++
T Consensus 4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~ 81 (275)
T 2pd4_A 4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQEL--NSPYVYELDVSKEEHFKSLYNSVKKD 81 (275)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHT--TCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEcCCCCHHHHHHHHHHHHHH
Confidence 568999999999 99999999999999999999999875 333333222 23678999999999887643
Q ss_pred hCCCcEEEeccCCCCC-----C--CCCCCCCCchhHHHHHHHHHHHHHhccC---CCeEEEEcccccccc
Q 028043 149 FEGVTHVICCTGTTAF-----P--SRRWDGDNTPEKVDWEGVRNLVSALPSS---LKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~-----~--~~~~~~~~~~~~vNv~g~~~l~~a~~~~---~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||.... + ....++....+++|+.|++++++++.+. .++||++||.++..+
T Consensus 82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~ 151 (275)
T 2pd4_A 82 LGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKY 151 (275)
T ss_dssp TSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB
T ss_pred cCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCC
Confidence 4689999999998642 1 1222344667899999999999988442 369999999877643
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.8e-20 Score=159.78 Aligned_cols=128 Identities=19% Similarity=0.217 Sum_probs=101.6
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChh----HHHHHhcccC---CCCEEEEEecCCChhccchhhhCCC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE----KATTLFGKQD---EETLQVCKGDTRNPKDLDPAIFEGV 152 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~----~~~~~~~~~~---~~~~~~v~~Di~d~~~v~~~~~~~~ 152 (214)
+++|+|+||||+|+||++++++|+++|++|++++|++. .++.+.+.+. ..+++++.+|++|.+++++ ++.++
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~-~~~~~ 103 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNN-ACAGV 103 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHH-HHTTC
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHH-HhcCC
Confidence 45689999999999999999999999999999999653 3333332221 2468899999999999987 46799
Q ss_pred cEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccccccccC
Q 028043 153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 153 d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~~ 209 (214)
|+|||+||..... ..+++....+++|+.|+.+++++++ .+.++||++||.++|+..
T Consensus 104 d~vih~A~~~~~~-~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~ 160 (352)
T 1sb8_A 104 DYVLHQAALGSVP-RSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDH 160 (352)
T ss_dssp SEEEECCSCCCHH-HHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTC
T ss_pred CEEEECCcccCch-hhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCC
Confidence 9999999975421 1123445677999999999999985 577899999999998754
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.82 E-value=1.9e-20 Score=153.77 Aligned_cols=132 Identities=18% Similarity=0.115 Sum_probs=98.7
Q ss_pred CCCCCCCEEEEEcCchHHHHHHHHHHHHCC---CeEEEEEcChhHHHHHhcccC-CCCEEEEEecCCChhccchhh----
Q 028043 77 TPASSSKLVLVAGGSGGVGQLVVASLLSRN---IKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAI---- 148 (214)
Q Consensus 77 ~~~~~~k~vlITGasggIG~~la~~L~~~G---~~V~~~~r~~~~~~~~~~~~~-~~~~~~v~~Di~d~~~v~~~~---- 148 (214)
...+++|+++||||+||||++++++|+++| ++|++++|+.++.+.+.+... ..++.++.+|++|++++++++
T Consensus 16 ~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 95 (267)
T 1sny_A 16 PRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIE 95 (267)
T ss_dssp ----CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHH
T ss_pred ccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHH
Confidence 355788999999999999999999999999 999999998765433221111 357889999999999988743
Q ss_pred --hC--CCcEEEeccCCCC-CCC---CCCCCCCchhHHHHHHHHHHHHHhcc-----------C-----CCeEEEEcccc
Q 028043 149 --FE--GVTHVICCTGTTA-FPS---RRWDGDNTPEKVDWEGVRNLVSALPS-----------S-----LKRIVLVSSVG 204 (214)
Q Consensus 149 --~~--~~d~li~~Ag~~~-~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~-----------~-----~~~iV~vSS~~ 204 (214)
++ ++|+||||||... ... ...++....+++|+.|+.++++++.+ + .++||++||.+
T Consensus 96 ~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~ 175 (267)
T 1sny_A 96 GVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSIL 175 (267)
T ss_dssp HHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGG
T ss_pred HhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEeccc
Confidence 23 7999999999865 111 12233455779999999999987721 1 57899999998
Q ss_pred cccc
Q 028043 205 VTKF 208 (214)
Q Consensus 205 ~~~~ 208 (214)
++..
T Consensus 176 ~~~~ 179 (267)
T 1sny_A 176 GSIQ 179 (267)
T ss_dssp GCST
T ss_pred cccc
Confidence 8654
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=2.1e-20 Score=153.76 Aligned_cols=130 Identities=8% Similarity=0.050 Sum_probs=100.7
Q ss_pred CCCCCCCEEEEEcCc--hHHHHHHHHHHHHCCCeEEEEEcChhHHH---HHhcccCCCCEEEEEecCCChhccchhh---
Q 028043 77 TPASSSKLVLVAGGS--GGVGQLVVASLLSRNIKSRLLLRDPEKAT---TLFGKQDEETLQVCKGDTRNPKDLDPAI--- 148 (214)
Q Consensus 77 ~~~~~~k~vlITGas--ggIG~~la~~L~~~G~~V~~~~r~~~~~~---~~~~~~~~~~~~~v~~Di~d~~~v~~~~--- 148 (214)
....++|+|+||||+ ||||++++++|+++|++|++++|+....+ ++.+. ...+.++.+|++|++++++++
T Consensus 9 ~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~ 86 (271)
T 3ek2_A 9 MGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAE--FGSELVFPCDVADDAQIDALFASL 86 (271)
T ss_dssp CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHH--TTCCCEEECCTTCHHHHHHHHHHH
T ss_pred ccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHH--cCCcEEEECCCCCHHHHHHHHHHH
Confidence 356789999999999 99999999999999999999999854333 23222 234778999999999988743
Q ss_pred ---hCCCcEEEeccCCCCCC---C-----CCCCCCCchhHHHHHHHHHHHHHhccC---CCeEEEEcccccccc
Q 028043 149 ---FEGVTHVICCTGTTAFP---S-----RRWDGDNTPEKVDWEGVRNLVSALPSS---LKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 ---~~~~d~li~~Ag~~~~~---~-----~~~~~~~~~~~vNv~g~~~l~~a~~~~---~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||+.... . ...++....+++|+.|+.++++++.+. .++||++||.+++.+
T Consensus 87 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~ 160 (271)
T 3ek2_A 87 KTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERA 160 (271)
T ss_dssp HHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSB
T ss_pred HHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccC
Confidence 46899999999986521 1 222334567799999999999988442 458999999988654
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.8e-20 Score=154.85 Aligned_cols=122 Identities=20% Similarity=0.125 Sum_probs=95.9
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
+.+++|+++||||+||||++++++|+++|++|++++|+.+..++ ...+.+|++|.+++++.+ +++
T Consensus 24 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~---------~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 94 (266)
T 3uxy_A 24 QGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAA---------DLHLPGDLREAAYADGLPGAVAAGLGR 94 (266)
T ss_dssp --CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCC---------SEECCCCTTSHHHHHHHHHHHHHHHSC
T ss_pred hCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHh---------hhccCcCCCCHHHHHHHHHHHHHhcCC
Confidence 45788999999999999999999999999999999998765432 133579999998887632 568
Q ss_pred CcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
+|+||||||...... ...++.++.+++|+.|++++++++ +.+.++||++||.+++.+
T Consensus 95 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~ 159 (266)
T 3uxy_A 95 LDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRP 159 (266)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBC
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCC
Confidence 999999999875322 223344567789999999999976 235689999999988654
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.3e-20 Score=153.56 Aligned_cols=128 Identities=14% Similarity=0.119 Sum_probs=98.6
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcC-hhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD-PEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~-~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
+++|+++||||+||||++++++|+++|++|++++|+ +++++++.+++. +.++.++.+|++|++++++++ ++
T Consensus 5 l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 84 (258)
T 3afn_B 5 LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFG 84 (258)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 568999999999999999999999999999999998 766665543332 346889999999999888643 34
Q ss_pred CCcEEEeccCC-CCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cC--C---CeEEEEccccccc
Q 028043 151 GVTHVICCTGT-TAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SS--L---KRIVLVSSVGVTK 207 (214)
Q Consensus 151 ~~d~li~~Ag~-~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~--~---~~iV~vSS~~~~~ 207 (214)
++|+||||||. ..... ...+.....+++|+.|+.++++++. .+ . ++||++||..++.
T Consensus 85 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~ 155 (258)
T 3afn_B 85 GIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHT 155 (258)
T ss_dssp SCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHH
T ss_pred CCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhcc
Confidence 89999999997 32111 1112235567999999999988662 12 2 7899999988764
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=99.81 E-value=2.2e-20 Score=153.68 Aligned_cols=131 Identities=15% Similarity=0.150 Sum_probs=101.1
Q ss_pred CCCCCCEEEEEcCc--hHHHHHHHHHHHHCCCeEEEEEcChhHH-HHHhcccC---CCCEEEEEecCCChhccchhh---
Q 028043 78 PASSSKLVLVAGGS--GGVGQLVVASLLSRNIKSRLLLRDPEKA-TTLFGKQD---EETLQVCKGDTRNPKDLDPAI--- 148 (214)
Q Consensus 78 ~~~~~k~vlITGas--ggIG~~la~~L~~~G~~V~~~~r~~~~~-~~~~~~~~---~~~~~~v~~Di~d~~~v~~~~--- 148 (214)
+++++|+++||||+ +|||++++++|+++|++|++++|+.+.. ++..+++. +.++.++++|++|++++++++
T Consensus 16 ~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 95 (267)
T 3gdg_A 16 LSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDV 95 (267)
T ss_dssp HCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHH
T ss_pred cCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHH
Confidence 45678999999999 9999999999999999999998875433 22222211 457889999999999988643
Q ss_pred ---hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 149 ---FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 ---~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||+..... ...++....+++|+.|+.++++++ +.+.++||++||.+++..
T Consensus 96 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~ 166 (267)
T 3gdg_A 96 VADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIA 166 (267)
T ss_dssp HHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC
T ss_pred HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEcccccccc
Confidence 568999999999875322 122334567899999999999977 235689999999887654
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=2.5e-19 Score=143.27 Aligned_cols=109 Identities=21% Similarity=0.320 Sum_probs=91.6
Q ss_pred CCCEEEEEcCchHHHHHHHHHHH-HCCCeEEEEEcChh-HHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLL-SRNIKSRLLLRDPE-KATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~-~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
++|+|+||||+|+||++++++|+ ++|++|++++|+++ +++++.. ...+++++.+|++|++++++ ++.++|+||||
T Consensus 4 mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~D~~d~~~~~~-~~~~~d~vv~~ 80 (221)
T 3r6d_A 4 MYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEII--DHERVTVIEGSFQNPGXLEQ-AVTNAEVVFVG 80 (221)
T ss_dssp SCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHH--TSTTEEEEECCTTCHHHHHH-HHTTCSEEEES
T ss_pred eEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhcc--CCCceEEEECCCCCHHHHHH-HHcCCCEEEEc
Confidence 35789999999999999999999 89999999999988 6665431 24678999999999999987 47899999999
Q ss_pred cCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccccccccC
Q 028043 159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 159 Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~~ 209 (214)
||.. |+. +.+++++++ .+.++||++||.+++...
T Consensus 81 ag~~----------------n~~-~~~~~~~~~~~~~~~iv~iSs~~~~~~~ 115 (221)
T 3r6d_A 81 AMES----------------GSD-MASIVKALSRXNIRRVIGVSMAGLSGEF 115 (221)
T ss_dssp CCCC----------------HHH-HHHHHHHHHHTTCCEEEEEEETTTTSCS
T ss_pred CCCC----------------Chh-HHHHHHHHHhcCCCeEEEEeeceecCCC
Confidence 9843 444 888999885 577899999999987643
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.7e-20 Score=157.30 Aligned_cols=126 Identities=18% Similarity=0.169 Sum_probs=97.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCC--CeEEEEEcChh--HHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPE--KATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G--~~V~~~~r~~~--~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li 156 (214)
++|+|+||||+|+||++++++|+++| ++|++++|+.. ..+.+.+.....+++++.+|++|.++++++ ++++|+||
T Consensus 2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~vi 80 (336)
T 2hun_A 2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKEL-VRKVDGVV 80 (336)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHH-HHTCSEEE
T ss_pred CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHH-hhCCCEEE
Confidence 35789999999999999999999986 89999998642 222222111135788999999999999874 58899999
Q ss_pred eccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CC-CeEEEEcccccccc
Q 028043 157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL-KRIVLVSSVGVTKF 208 (214)
Q Consensus 157 ~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~-~~iV~vSS~~~~~~ 208 (214)
|+||..... ...++....+++|+.|+.++++++.+ +. ++||++||.++|+.
T Consensus 81 h~A~~~~~~-~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~ 133 (336)
T 2hun_A 81 HLAAESHVD-RSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGD 133 (336)
T ss_dssp ECCCCCCHH-HHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCC
T ss_pred ECCCCcChh-hhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCC
Confidence 999976421 11124456789999999999998853 43 79999999998864
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.5e-19 Score=147.78 Aligned_cols=123 Identities=20% Similarity=0.155 Sum_probs=93.0
Q ss_pred CCCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh--hCCCcE
Q 028043 77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--FEGVTH 154 (214)
Q Consensus 77 ~~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~--~~~~d~ 154 (214)
...+++|+++||||+||||++++++|+++|++|++++|+++..+++ ..+.++ +|+ .+++++.+ +.++|+
T Consensus 14 ~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~------~~~~~~-~D~--~~~~~~~~~~~~~iD~ 84 (249)
T 1o5i_A 14 ELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS------GHRYVV-CDL--RKDLDLLFEKVKEVDI 84 (249)
T ss_dssp --CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT------CSEEEE-CCT--TTCHHHHHHHSCCCSE
T ss_pred HhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHhh------CCeEEE-eeH--HHHHHHHHHHhcCCCE
Confidence 4667899999999999999999999999999999999998655443 246667 999 44555422 348999
Q ss_pred EEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 155 VICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 155 li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
||||||...... ...++....+++|+.|+.++++++ +.+.++||++||.+++.+
T Consensus 85 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 146 (249)
T 1o5i_A 85 LVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISP 146 (249)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCC
Confidence 999999764321 122334567799999998887765 235689999999988754
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.6e-20 Score=160.24 Aligned_cols=128 Identities=16% Similarity=0.144 Sum_probs=99.9
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC-CCCEEEEEecCCChhccchhhhC--CCcEEE
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAIFE--GVTHVI 156 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~v~~Di~d~~~v~~~~~~--~~d~li 156 (214)
+++|+|+||||+|+||++++++|+++|++|++++|++++.+.+.+.+. ..+++++.+|++|++++.++ +. ++|+||
T Consensus 7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~~~d~vi 85 (357)
T 1rkx_A 7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLES-IREFQPEIVF 85 (357)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHH-HHHHCCSEEE
T ss_pred hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHH-HHhcCCCEEE
Confidence 357899999999999999999999999999999998755433322211 34688999999999998874 44 499999
Q ss_pred eccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-C-CCeEEEEccccccccC
Q 028043 157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-LKRIVLVSSVGVTKFN 209 (214)
Q Consensus 157 ~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~-~~~iV~vSS~~~~~~~ 209 (214)
|+||.... ....++....+++|+.|+.++++++++ + .++||++||.++|+..
T Consensus 86 h~A~~~~~-~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~ 139 (357)
T 1rkx_A 86 HMAAQPLV-RLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNK 139 (357)
T ss_dssp ECCSCCCH-HHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCC
T ss_pred ECCCCccc-ccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCC
Confidence 99996431 111234456789999999999998854 4 7899999999988743
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=99.81 E-value=3.1e-20 Score=156.02 Aligned_cols=120 Identities=15% Similarity=0.176 Sum_probs=96.8
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhC-CCcEEEec
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-GVTHVICC 158 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~-~~d~li~~ 158 (214)
.+.|+|+||||+|+||++++++|+++|++|++++|++.. +. + +++++.+|++|++++++++-+ ++|+|||+
T Consensus 10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l---~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 81 (321)
T 2pk3_A 10 HGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P---NVEMISLDIMDSQRVKKVISDIKPDYIFHL 81 (321)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T---TEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred cCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c---eeeEEECCCCCHHHHHHHHHhcCCCEEEEc
Confidence 456899999999999999999999999999999998764 21 1 588899999999999875322 49999999
Q ss_pred cCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc--CCCeEEEEcccccccc
Q 028043 159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS--SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 159 Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~--~~~~iV~vSS~~~~~~ 208 (214)
||.... ...+++....+++|+.|+.+++++++. +.++||++||.++|+.
T Consensus 82 A~~~~~-~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~ 132 (321)
T 2pk3_A 82 AAKSSV-KDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGM 132 (321)
T ss_dssp CSCCCH-HHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBS
T ss_pred Ccccch-hhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCC
Confidence 997642 122335566789999999999999853 4789999999998875
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.3e-19 Score=142.66 Aligned_cols=108 Identities=14% Similarity=0.203 Sum_probs=90.1
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccCCC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT 162 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag~~ 162 (214)
|+|+||||+|+||++++++|+++|++|++++|++++.+++. .+++++.+|++|+++ + .++++|+||||||..
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-----~~~~~~~~D~~d~~~--~-~~~~~d~vi~~ag~~ 72 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-----KDINILQKDIFDLTL--S-DLSDQNVVVDAYGIS 72 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-----SSSEEEECCGGGCCH--H-HHTTCSEEEECCCSS
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-----CCCeEEeccccChhh--h-hhcCCCEEEECCcCC
Confidence 57999999999999999999999999999999998876653 468899999999887 3 478999999999974
Q ss_pred CCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CCCeEEEEcccccccc
Q 028043 163 AFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 163 ~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~~~iV~vSS~~~~~~ 208 (214)
.. ...+|+.++.++++++++ +.+++|++||.++++.
T Consensus 73 ~~----------~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~ 109 (221)
T 3ew7_A 73 PD----------EAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQI 109 (221)
T ss_dssp TT----------TTTSHHHHHHHHHHHHCSCCSSEEEEECCCC----
T ss_pred cc----------ccchHHHHHHHHHHHHHhcCCceEEEEecceEEEc
Confidence 31 246799999999999965 6899999999987643
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=6.8e-20 Score=150.86 Aligned_cols=127 Identities=11% Similarity=0.108 Sum_probs=97.8
Q ss_pred CCCCEEEEEcCc--hHHHHHHHHHHHHCCCeEEEEEcCh---hHHHHHhcccCCCCEEEEEecCCChhccchhh------
Q 028043 80 SSSKLVLVAGGS--GGVGQLVVASLLSRNIKSRLLLRDP---EKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 80 ~~~k~vlITGas--ggIG~~la~~L~~~G~~V~~~~r~~---~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
+++|+++||||+ ||||++++++|+++|++|++++|++ +..+++.+.. ....++++|++|++++++++
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQL--GSDIVLQCDVAEDASIDTMFAELGKV 84 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHT--TCCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhc--CCcEEEEccCCCHHHHHHHHHHHHHH
Confidence 568999999999 9999999999999999999999987 3333333222 22467899999999887643
Q ss_pred hCCCcEEEeccCCCCC----CC----CCCCCCCchhHHHHHHHHHHHHHhccC---CCeEEEEcccccccc
Q 028043 149 FEGVTHVICCTGTTAF----PS----RRWDGDNTPEKVDWEGVRNLVSALPSS---LKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~----~~----~~~~~~~~~~~vNv~g~~~l~~a~~~~---~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||.... .. ...+++...+++|+.|+.++++++.+. .++||++||.+++.+
T Consensus 85 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~ 155 (265)
T 1qsg_A 85 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERA 155 (265)
T ss_dssp CSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB
T ss_pred cCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccC
Confidence 3589999999998642 10 222344667899999999999988442 369999999887654
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.80 E-value=9.5e-20 Score=152.77 Aligned_cols=119 Identities=19% Similarity=0.219 Sum_probs=92.3
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccCC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGT 161 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag~ 161 (214)
||+||||||+|+||++++++|+++|+.|.+..|+....+.. ...++++.+|++| +++.+ ++.++|+|||+||.
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~~-----~~~~~~~~~Dl~~-~~~~~-~~~~~d~vih~a~~ 73 (313)
T 3ehe_A 1 MSLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEFV-----NEAARLVKADLAA-DDIKD-YLKGAEEVWHIAAN 73 (313)
T ss_dssp --CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGGS-----CTTEEEECCCTTT-SCCHH-HHTTCSEEEECCCC
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhhc-----CCCcEEEECcCCh-HHHHH-HhcCCCEEEECCCC
Confidence 46899999999999999999999995454444443332221 3568899999999 88887 46899999999996
Q ss_pred CCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEcccccccc
Q 028043 162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 162 ~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~ 208 (214)
.. .....+++...+++|+.|+.+++++++ .+.++||++||.++|+.
T Consensus 74 ~~-~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~ 120 (313)
T 3ehe_A 74 PD-VRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGE 120 (313)
T ss_dssp CC-CC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCS
T ss_pred CC-hhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCc
Confidence 54 223335566788999999999999984 57889999999999874
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=4e-20 Score=156.59 Aligned_cols=125 Identities=20% Similarity=0.210 Sum_probs=94.5
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh-hHHHHHhccc-CCCCEEEEEecCCChhccchhhhCC--CcEEEe
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP-EKATTLFGKQ-DEETLQVCKGDTRNPKDLDPAIFEG--VTHVIC 157 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~-~~~~~~~~~~-~~~~~~~v~~Di~d~~~v~~~~~~~--~d~li~ 157 (214)
||+||||||+|+||++++++|+++|++|++++|+. ...+...+.+ ...+++++.+|++|+++++++ +.+ +|+|||
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~-~~~~~~d~vih 79 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRL-ITKYMPDSCFH 79 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHH-HHHHCCSEEEE
T ss_pred CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHH-HhccCCCEEEE
Confidence 47899999999999999999999999999999842 1111111111 123588899999999998874 554 999999
Q ss_pred ccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CCC-eEEEEcccccccc
Q 028043 158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLK-RIVLVSSVGVTKF 208 (214)
Q Consensus 158 ~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~~-~iV~vSS~~~~~~ 208 (214)
+||..... ..+++....+++|+.|+.++++++++ +.+ +||++||.++|+.
T Consensus 80 ~A~~~~~~-~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~ 131 (347)
T 1orr_A 80 LAGQVAMT-TSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGD 131 (347)
T ss_dssp CCCCCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTT
T ss_pred CCcccChh-hhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCC
Confidence 99975421 11234456789999999999999854 554 9999999998874
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=4.2e-20 Score=156.06 Aligned_cols=130 Identities=21% Similarity=0.214 Sum_probs=97.7
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHH--HHHhcccCCCCEEEEEecCCChhccchhhhC-CCcEE
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA--TTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-GVTHV 155 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~--~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~-~~d~l 155 (214)
...+|+||||||+|+||++++++|+++|++|++++|+.+.. ..+.......+++++.+|++|.+++++++-+ ++|+|
T Consensus 11 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 90 (335)
T 1rpn_A 11 GSMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEV 90 (335)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred cccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCCCEE
Confidence 34678999999999999999999999999999999986531 1111110134688999999999998875322 58999
Q ss_pred EeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CC-CeEEEEccccccccC
Q 028043 156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL-KRIVLVSSVGVTKFN 209 (214)
Q Consensus 156 i~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~-~~iV~vSS~~~~~~~ 209 (214)
||+||..... ..+++....+++|+.|+.++++++++ +. ++||++||.++|+..
T Consensus 91 ih~A~~~~~~-~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~ 145 (335)
T 1rpn_A 91 YNLAAQSFVG-ASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLI 145 (335)
T ss_dssp EECCSCCCHH-HHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSC
T ss_pred EECccccchh-hhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCC
Confidence 9999975421 11344566789999999999999854 64 899999999988753
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.1e-19 Score=147.14 Aligned_cols=112 Identities=23% Similarity=0.323 Sum_probs=88.2
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCC-CeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEE
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVI 156 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li 156 (214)
+.+++|+|+||||+|+||++++++|+++| ++|++++|++++++++. ..+++++++|++|++++++ ++.++|+||
T Consensus 19 ~~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~----~~~~~~~~~Dl~d~~~~~~-~~~~~D~vv 93 (236)
T 3qvo_A 19 FQGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPY----PTNSQIIMGDVLNHAALKQ-AMQGQDIVY 93 (236)
T ss_dssp ---CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSC----CTTEEEEECCTTCHHHHHH-HHTTCSEEE
T ss_pred ecCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccc----cCCcEEEEecCCCHHHHHH-HhcCCCEEE
Confidence 44567899999999999999999999999 89999999987654432 4578999999999999997 478999999
Q ss_pred eccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccccccccC
Q 028043 157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 157 ~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~~ 209 (214)
||||... ....+.+++++++ .+.++||++||.++++..
T Consensus 94 ~~a~~~~---------------~~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~ 132 (236)
T 3qvo_A 94 ANLTGED---------------LDIQANSVIAAMKACDVKRLIFVLSLGIYDEV 132 (236)
T ss_dssp EECCSTT---------------HHHHHHHHHHHHHHTTCCEEEEECCCCC----
T ss_pred EcCCCCc---------------hhHHHHHHHHHHHHcCCCEEEEEecceecCCC
Confidence 9998521 1134668888884 578899999999988654
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=1.4e-19 Score=155.00 Aligned_cols=126 Identities=17% Similarity=0.241 Sum_probs=93.8
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHH-----HHHhccc--CCCCEEEEEecCCChhccchhhhC-CCc
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA-----TTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFE-GVT 153 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~-----~~~~~~~--~~~~~~~v~~Di~d~~~v~~~~~~-~~d 153 (214)
||+|+||||+|+||++++++|+++|++|++++|+.+.. +.+.+.. ...+++++.+|++|.+++++++-+ ++|
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD 80 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCCC
Confidence 57899999999999999999999999999999986542 1111110 124688899999999998874322 589
Q ss_pred EEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CC---CeEEEEcccccccc
Q 028043 154 HVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL---KRIVLVSSVGVTKF 208 (214)
Q Consensus 154 ~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~---~~iV~vSS~~~~~~ 208 (214)
+||||||.... ...+++....+++|+.|+.++++++++ +. ++||++||.++|+.
T Consensus 81 ~vih~A~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~ 138 (372)
T 1db3_A 81 EVYNLGAMSHV-AVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGL 138 (372)
T ss_dssp EEEECCCCCTT-TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTT
T ss_pred EEEECCcccCc-cccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCC
Confidence 99999997652 223344556779999999999998854 55 79999999998874
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=2.2e-20 Score=158.52 Aligned_cols=124 Identities=20% Similarity=0.214 Sum_probs=97.3
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChh----------HHHHHhcccCCCCEEEEEecCCChhccchhhhC-
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE----------KATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE- 150 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~----------~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~- 150 (214)
+|+|+||||+|+||++++++|+++|++|++++|+.. ..+++.+. .+.+++++.+|++|.++++++ +.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~D~~~~~~~~~~-~~~ 79 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQEL-TGRSVEFEEMDILDQGALQRL-FKK 79 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHH-HTCCCEEEECCTTCHHHHHHH-HHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhc-cCCceEEEECCCCCHHHHHHH-HHh
Confidence 589999999999999999999999999999988532 22222211 134678999999999998874 44
Q ss_pred -CCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEcccccccc
Q 028043 151 -GVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 151 -~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~ 208 (214)
++|+|||+||..... ...++....+++|+.|+.+++++++ .+.++||++||.++|+.
T Consensus 80 ~~~d~vih~A~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~ 138 (348)
T 1ek6_A 80 YSFMAVIHFAGLKAVG-ESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGN 138 (348)
T ss_dssp CCEEEEEECCSCCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCS
T ss_pred cCCCEEEECCCCcCcc-chhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCC
Confidence 799999999976421 1122445678999999999999885 47789999999998864
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=99.80 E-value=9.8e-20 Score=150.33 Aligned_cols=127 Identities=13% Similarity=0.061 Sum_probs=99.9
Q ss_pred CCCCCEEEEEcC--chHHHHHHHHHHHHCCCeEEEEEcChhH-HHHHhcccCCCCEEEEEecCCChhccchhh------h
Q 028043 79 ASSSKLVLVAGG--SGGVGQLVVASLLSRNIKSRLLLRDPEK-ATTLFGKQDEETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 79 ~~~~k~vlITGa--sggIG~~la~~L~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
.+++|+++|||| +||||++++++|+++|++|++++|++++ .+++.+++ +.++.++.+|++|++++++++ +
T Consensus 4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 82 (269)
T 2h7i_A 4 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL-PAKAPLLELDVQNEEHLASLAGRVTEAI 82 (269)
T ss_dssp TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTS-SSCCCEEECCTTCHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhc-CCCceEEEccCCCHHHHHHHHHHHHHHh
Confidence 357899999999 9999999999999999999999998766 45555544 345778999999999888643 4
Q ss_pred C---CCcEEEeccCCCCC------C--CCCCCCCCchhHHHHHHHHHHHHHhccC---CCeEEEEcccccc
Q 028043 150 E---GVTHVICCTGTTAF------P--SRRWDGDNTPEKVDWEGVRNLVSALPSS---LKRIVLVSSVGVT 206 (214)
Q Consensus 150 ~---~~d~li~~Ag~~~~------~--~~~~~~~~~~~~vNv~g~~~l~~a~~~~---~~~iV~vSS~~~~ 206 (214)
+ ++|+||||||.... + ....++..+.+++|+.|++++++++.+. .++||++||.+.+
T Consensus 83 g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~ 153 (269)
T 2h7i_A 83 GAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSR 153 (269)
T ss_dssp CTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSS
T ss_pred CCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCcccc
Confidence 5 89999999997641 1 1222334567789999999999988432 2699999998763
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.80 E-value=7.9e-20 Score=153.24 Aligned_cols=114 Identities=13% Similarity=0.112 Sum_probs=68.0
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhC-CCcEEEeccC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-GVTHVICCTG 160 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~-~~d~li~~Ag 160 (214)
+|+|+||||+|+||++++++|+++|++|++++|+.+. .+ ++.+|++|++++++++-+ ++|+|||+||
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~----------~~--~~~~Dl~d~~~~~~~~~~~~~d~vih~A~ 69 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR----------PK--FEQVNLLDSNAVHHIIHDFQPHVIVHCAA 69 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC------------------------------CHHHHHHHCCSEEEECC-
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC----------CC--eEEecCCCHHHHHHHHHhhCCCEEEECCc
Confidence 5899999999999999999999999999999987543 11 678999999999875322 5999999999
Q ss_pred CCCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEEcccccccc
Q 028043 161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 161 ~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~vSS~~~~~~ 208 (214)
.... ....++....+++|+.|+.++++++.+...+||++||.++|+.
T Consensus 70 ~~~~-~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~~~ 116 (315)
T 2ydy_A 70 ERRP-DVVENQPDAASQLNVDASGNLAKEAAAVGAFLIYISSDYVFDG 116 (315)
T ss_dssp -------------------CHHHHHHHHHHHHHTCEEEEEEEGGGSCS
T ss_pred ccCh-hhhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEchHHHcCC
Confidence 7642 2223455677899999999999998542249999999999875
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.80 E-value=4.3e-20 Score=155.69 Aligned_cols=121 Identities=14% Similarity=0.182 Sum_probs=96.6
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhC--CCcEEEecc
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVICCT 159 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~--~~d~li~~A 159 (214)
||+|+||||+|+||++++++|+++|++|++++|+.....+ .+ ..+++++.+|++|.++++++ +. ++|+|||+|
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~-~~~~~~~~~D~~~~~~~~~~-~~~~~~d~vih~a 75 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHED---AI-TEGAKFYNGDLRDKAFLRDV-FTQENIEAVMHFA 75 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG---GS-CTTSEEEECCTTCHHHHHHH-HHHSCEEEEEECC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchh---hc-CCCcEEEECCCCCHHHHHHH-HhhcCCCEEEECC
Confidence 4789999999999999999999999999999997643221 12 13678899999999998874 45 899999999
Q ss_pred CCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEcccccccc
Q 028043 160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 160 g~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~ 208 (214)
|..... ...++....+++|+.|+.+++++++ .+.++||++||.++|+.
T Consensus 76 ~~~~~~-~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~ 124 (330)
T 2c20_A 76 ADSLVG-VSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGE 124 (330)
T ss_dssp CCCCHH-HHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCS
T ss_pred cccCcc-ccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCC
Confidence 976421 1112445677999999999999985 47789999999999874
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.80 E-value=7.1e-20 Score=149.39 Aligned_cols=130 Identities=14% Similarity=0.067 Sum_probs=99.8
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEE-EcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLL-LRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~-~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
++++|+++||||+||||++++++|+++|++|+++ .|+.+..++..+++. +..+.++.+|++|.+++++.+ +
T Consensus 4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (255)
T 3icc_A 4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNEL 83 (255)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHh
Confidence 4678999999999999999999999999999886 566666655444332 456788999999999887632 1
Q ss_pred ------CCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEcccccccc
Q 028043 150 ------EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 150 ------~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~~ 208 (214)
+++|+||||||...... ...+..++.+++|+.|+.++++++.+ ..++||++||.+++.+
T Consensus 84 ~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~ 154 (255)
T 3icc_A 84 QNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRIS 154 (255)
T ss_dssp HHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSC
T ss_pred cccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccC
Confidence 24999999999864322 12223356678999999999998854 2468999999988654
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.80 E-value=2.4e-20 Score=158.10 Aligned_cols=126 Identities=15% Similarity=0.127 Sum_probs=100.0
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCC-------CeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRN-------IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE 150 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~ 150 (214)
..+++|+|+||||+|+||++++++|+++| ++|++++|+.+.... ....+++++.+|++|++++++++-+
T Consensus 10 ~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~----~~~~~~~~~~~Dl~d~~~~~~~~~~ 85 (342)
T 2hrz_A 10 LYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA----GFSGAVDARAADLSAPGEAEKLVEA 85 (342)
T ss_dssp SCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT----TCCSEEEEEECCTTSTTHHHHHHHT
T ss_pred CCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc----ccCCceeEEEcCCCCHHHHHHHHhc
Confidence 34678899999999999999999999999 899999998643221 1135688899999999998874325
Q ss_pred CCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-C-----CCeEEEEccccccccC
Q 028043 151 GVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-----LKRIVLVSSVGVTKFN 209 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~-----~~~iV~vSS~~~~~~~ 209 (214)
++|+|||+||.... ...+++...+++|+.|+.++++++++ + .++||++||.++|+..
T Consensus 86 ~~d~vih~A~~~~~--~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~ 148 (342)
T 2hrz_A 86 RPDVIFHLAAIVSG--EAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAP 148 (342)
T ss_dssp CCSEEEECCCCCHH--HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSS
T ss_pred CCCEEEECCccCcc--cccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCC
Confidence 89999999997641 11124456789999999999998843 3 6899999999998753
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=3.6e-20 Score=159.57 Aligned_cols=125 Identities=14% Similarity=0.078 Sum_probs=96.7
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCC-CeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
+++|+|+||||+|+||++++++|+++| ++|++++|+.....+... ...+++++.+|++|++++++ ++.++|+|||+
T Consensus 30 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~--~~~~v~~~~~Dl~d~~~l~~-~~~~~d~Vih~ 106 (377)
T 2q1s_A 30 LANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVP--DHPAVRFSETSITDDALLAS-LQDEYDYVFHL 106 (377)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSC--CCTTEEEECSCTTCHHHHHH-CCSCCSEEEEC
T ss_pred hCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhcc--CCCceEEEECCCCCHHHHHH-HhhCCCEEEEC
Confidence 567899999999999999999999999 999999998654322111 13578899999999999886 46799999999
Q ss_pred cCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-c-CCCeEEEEcccccccc
Q 028043 159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-S-SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 159 Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~-~~~~iV~vSS~~~~~~ 208 (214)
||..... ..+++....+++|+.|+.+++++++ . +.++||++||.++|+.
T Consensus 107 A~~~~~~-~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~ 157 (377)
T 2q1s_A 107 ATYHGNQ-SSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAE 157 (377)
T ss_dssp CCCSCHH-HHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC-----
T ss_pred CCccCch-hhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCC
Confidence 9976421 1112445678999999999999985 4 6789999999998863
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.80 E-value=6.3e-20 Score=149.34 Aligned_cols=126 Identities=15% Similarity=0.143 Sum_probs=86.0
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccc---hhh--hCCCc
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLD---PAI--FEGVT 153 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~---~~~--~~~~d 153 (214)
++++|+++||||+||||++++++|++ |++|++++|++++.+++.+ ..++.++.+|++|.+..+ +.+ ++++|
T Consensus 2 ~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id 77 (245)
T 3e9n_A 2 SLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE---IEGVEPIESDIVKEVLEEGGVDKLKNLDHVD 77 (245)
T ss_dssp ----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT---STTEEEEECCHHHHHHTSSSCGGGTTCSCCS
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh---hcCCcceecccchHHHHHHHHHHHHhcCCCC
Confidence 45789999999999999999999987 9999999999988877654 246888999999875422 211 45899
Q ss_pred EEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh----ccCCCeEEEEcccccccc
Q 028043 154 HVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 154 ~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~----~~~~~~iV~vSS~~~~~~ 208 (214)
+||||||...... ...++....+++|+.|+.++++++ ++..++||++||.+++.+
T Consensus 78 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~ 139 (245)
T 3e9n_A 78 TLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAGNGP 139 (245)
T ss_dssp EEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC-------
T ss_pred EEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCcccccC
Confidence 9999999875321 112234566799999999998876 233489999999988764
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.1e-19 Score=153.80 Aligned_cols=124 Identities=22% Similarity=0.288 Sum_probs=96.9
Q ss_pred CEEEEEcCchHHHHHHHHHHHHC---C---CeEEEEEcChh--HHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcE
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSR---N---IKSRLLLRDPE--KATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTH 154 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~---G---~~V~~~~r~~~--~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~ 154 (214)
|+|+||||+|+||++++++|+++ | ++|++++|+.. ..+.+.......+++++.+|++|+++++++ ++++|+
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~ 79 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARE-LRGVDA 79 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHH-TTTCCE
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHH-hcCCCE
Confidence 47999999999999999999997 8 99999998642 112221111135788999999999999874 689999
Q ss_pred EEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEcccccccc
Q 028043 155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 155 li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~ 208 (214)
|||+||..... ...++....+++|+.|+.+++++++ .+.++||++||.++|+.
T Consensus 80 Vih~A~~~~~~-~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~ 133 (337)
T 1r6d_A 80 IVHFAAESHVD-RSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGS 133 (337)
T ss_dssp EEECCSCCCHH-HHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCC
T ss_pred EEECCCccCch-hhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCC
Confidence 99999976421 1112445678999999999999985 47789999999998864
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.79 E-value=6.1e-20 Score=145.07 Aligned_cols=121 Identities=13% Similarity=0.072 Sum_probs=97.3
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhh--CCCcEEEeccC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF--EGVTHVICCTG 160 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~--~~~d~li~~Ag 160 (214)
|+++||||+||||++++++|+++ +|++++|++++.+++.+.+.. +++.+|++|++++++++- +++|+||||||
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~---~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag 75 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA---RALPADLADELEAKALLEEAGPLDLLVHAVG 75 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC---EECCCCTTSHHHHHHHHHHHCSEEEEEECCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC---cEEEeeCCCHHHHHHHHHhcCCCCEEEECCC
Confidence 68999999999999999999998 999999999888776554432 788899999999987432 48999999999
Q ss_pred CCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEcccccccc
Q 028043 161 TTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 161 ~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~ 208 (214)
...... ...++....+++|+.|+.+++++++ .+.++||++||.+++.+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~~ 127 (207)
T 2yut_A 76 KAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYVQ 127 (207)
T ss_dssp CCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHS
T ss_pred cCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhccC
Confidence 864321 2334446678999999999999984 35679999999987654
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.79 E-value=3.2e-20 Score=152.53 Aligned_cols=114 Identities=22% Similarity=0.200 Sum_probs=96.0
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccCC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGT 161 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag~ 161 (214)
+|+|+||||+|+||++++++|+++|++|++++|++.+.. ..+++++.+|++|++++++ ++.++|+||||||.
T Consensus 2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------~~~~~~~~~Dl~d~~~~~~-~~~~~d~vi~~a~~ 73 (267)
T 3ay3_A 2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA-------EAHEEIVACDLADAQAVHD-LVKDCDGIIHLGGV 73 (267)
T ss_dssp EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC-------CTTEEECCCCTTCHHHHHH-HHTTCSEEEECCSC
T ss_pred CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc-------CCCccEEEccCCCHHHHHH-HHcCCCEEEECCcC
Confidence 478999999999999999999999999999999875311 2357889999999999987 46889999999997
Q ss_pred CCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEcccccccc
Q 028043 162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 162 ~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~ 208 (214)
.. .+.....+++|+.++.+++++++ .+.++||++||.++++.
T Consensus 74 ~~-----~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~ 116 (267)
T 3ay3_A 74 SV-----ERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGY 116 (267)
T ss_dssp CS-----CCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTT
T ss_pred CC-----CCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCC
Confidence 52 12345678999999999999885 57789999999998864
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.2e-19 Score=148.40 Aligned_cols=121 Identities=15% Similarity=0.082 Sum_probs=93.3
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
...++|+++||||+||||++++++|+++|++|++++|++++.+ ...+.+|++|.+++++++ +++
T Consensus 18 ~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~----------~~~~~~d~~d~~~v~~~~~~~~~~~g~ 87 (251)
T 3orf_A 18 GSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA----------DHSFTIKDSGEEEIKSVIEKINSKSIK 87 (251)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS----------SEEEECSCSSHHHHHHHHHHHHTTTCC
T ss_pred ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc----------ccceEEEeCCHHHHHHHHHHHHHHcCC
Confidence 4456899999999999999999999999999999999876432 135789999999888643 457
Q ss_pred CcEEEeccCCCCCCC----CCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEcccccccc
Q 028043 152 VTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~----~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~~ 208 (214)
+|+||||||...... ..+++..+.+++|+.|+.++++++.+ ..++||++||.+++.+
T Consensus 88 iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~ 151 (251)
T 3orf_A 88 VDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNR 151 (251)
T ss_dssp EEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC
T ss_pred CCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccC
Confidence 999999999864221 12233456778999999999998733 2358999999988654
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=2.2e-19 Score=155.07 Aligned_cols=127 Identities=20% Similarity=0.183 Sum_probs=97.6
Q ss_pred CCEEEEEcCchHHHHHHHHHHH-HCCCeEEEEEcChhH---------HHHH---hcccCC----CC---EEEEEecCCCh
Q 028043 82 SKLVLVAGGSGGVGQLVVASLL-SRNIKSRLLLRDPEK---------ATTL---FGKQDE----ET---LQVCKGDTRNP 141 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~-~~G~~V~~~~r~~~~---------~~~~---~~~~~~----~~---~~~v~~Di~d~ 141 (214)
+|+||||||+|+||++++++|+ ++|++|++++|+... .+.+ .+.+.+ .+ ++++.+|++|+
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~ 81 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE 81 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence 4689999999999999999999 999999999997543 2222 111211 24 88999999999
Q ss_pred hccchhhh--CCCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccccccccC
Q 028043 142 KDLDPAIF--EGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 142 ~~v~~~~~--~~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~~ 209 (214)
+++++++- +++|+||||||..... ...++....+++|+.|+.+++++++ .+.++||++||.++|+..
T Consensus 82 ~~~~~~~~~~~~~d~vih~A~~~~~~-~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~ 151 (397)
T 1gy8_A 82 DFLNGVFTRHGPIDAVVHMCAFLAVG-ESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNP 151 (397)
T ss_dssp HHHHHHHHHSCCCCEEEECCCCCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSC
T ss_pred HHHHHHHHhcCCCCEEEECCCccCcC-cchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCC
Confidence 99887532 3499999999976421 1122445678999999999999984 577899999999888643
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.79 E-value=3.8e-20 Score=149.83 Aligned_cols=120 Identities=14% Similarity=0.100 Sum_probs=94.2
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------h--CCC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------F--EGV 152 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~--~~~ 152 (214)
++|+++||||+||||++++++|+++|++|++++|++++.+ ....++.+|++|++++++++ + +++
T Consensus 2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~--------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~i 73 (236)
T 1ooe_A 2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA--------DSNILVDGNKNWTEQEQSILEQTASSLQGSQV 73 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS--------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc--------cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCC
Confidence 5789999999999999999999999999999999876532 13567789999999887643 3 589
Q ss_pred cEEEeccCCCCCCCC----CCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEcccccccc
Q 028043 153 THVICCTGTTAFPSR----RWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 153 d~li~~Ag~~~~~~~----~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~~ 208 (214)
|+||||||....... ..++....+++|+.|+.++++++.+ ..++||++||.+++.+
T Consensus 74 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~ 136 (236)
T 1ooe_A 74 DGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGP 136 (236)
T ss_dssp EEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC
T ss_pred CEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccC
Confidence 999999997642111 1123356778999999999998733 2369999999988654
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=7.3e-20 Score=155.33 Aligned_cols=124 Identities=15% Similarity=0.181 Sum_probs=97.3
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHC--CCeEEEEEcChhH-HHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSR--NIKSRLLLRDPEK-ATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~--G~~V~~~~r~~~~-~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
+|+|+||||+|+||++++++|+++ |++|++++|+... ..+....+...+++++.+|++|++++++ ++.++|+|||+
T Consensus 4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~-~~~~~d~vih~ 82 (348)
T 1oc2_A 4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDK-LAAKADAIVHY 82 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHH-HHTTCSEEEEC
T ss_pred CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHH-HhhcCCEEEEC
Confidence 579999999999999999999998 8999999996521 1111122224578999999999999987 47889999999
Q ss_pred cCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CCCeEEEEcccccccc
Q 028043 159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 159 Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~~~iV~vSS~~~~~~ 208 (214)
||.... ...+++....+++|+.|+.++++++.+ +. +||++||.++|+.
T Consensus 83 A~~~~~-~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~v~~SS~~vyg~ 131 (348)
T 1oc2_A 83 AAESHN-DNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGD 131 (348)
T ss_dssp CSCCCH-HHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCC
T ss_pred CcccCc-cchhhCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEecccceeCC
Confidence 997642 111234556789999999999999854 55 9999999998864
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.3e-19 Score=150.31 Aligned_cols=114 Identities=25% Similarity=0.330 Sum_probs=92.6
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
++|+|+||| +|+||++++++|+++|++|++++|+++.. ..+++++.+|++|.+++++++-+++|+|||+||
T Consensus 2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~--------~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~ 72 (286)
T 3gpi_A 2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM--------PAGVQTLIADVTRPDTLASIVHLRPEILVYCVA 72 (286)
T ss_dssp CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC--------CTTCCEEECCTTCGGGCTTGGGGCCSEEEECHH
T ss_pred CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc--------ccCCceEEccCCChHHHHHhhcCCCCEEEEeCC
Confidence 467899999 59999999999999999999999987642 356788999999999999753334999999999
Q ss_pred CCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccccccccC
Q 028043 161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 161 ~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~~ 209 (214)
... .+....+++|+.++.+++++++ .+.++||++||.++|+..
T Consensus 73 ~~~------~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~ 116 (286)
T 3gpi_A 73 ASE------YSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQE 116 (286)
T ss_dssp HHH------HC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCC
T ss_pred CCC------CCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCC
Confidence 643 2334567889999999999995 577899999999998754
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1.4e-19 Score=153.46 Aligned_cols=128 Identities=15% Similarity=0.158 Sum_probs=95.7
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEE---------cChhHHHHHhcccCCCCEEEEEecCCChhccchhh
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLL---------RDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~---------r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~ 148 (214)
+.+++|+++||||+||||++++++|+++|++|++++ |+.++.+++.+++..... ...+|++|.+++++.+
T Consensus 5 ~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~-~~~~D~~~~~~~~~~~ 83 (319)
T 1gz6_A 5 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG-KAVANYDSVEAGEKLV 83 (319)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTC-EEEEECCCGGGHHHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCC-eEEEeCCCHHHHHHHH
Confidence 457889999999999999999999999999999974 456666554443321111 2358999998776532
Q ss_pred ------hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccc
Q 028043 149 ------FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVT 206 (214)
Q Consensus 149 ------~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~ 206 (214)
++++|+||||||+..... ...+..+..+++|+.|++++++++ +.+.++||++||.++.
T Consensus 84 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~ 155 (319)
T 1gz6_A 84 KTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGI 155 (319)
T ss_dssp HHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHH
T ss_pred HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhc
Confidence 568999999999875321 222344567899999999999876 2356899999998664
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.79 E-value=7.3e-20 Score=147.03 Aligned_cols=113 Identities=18% Similarity=0.147 Sum_probs=90.5
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh--hCCCcEEE
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--FEGVTHVI 156 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~--~~~~d~li 156 (214)
.+++|+++||||+||||++++++|+++|++|++++|+.+ +|++|++++++++ ++++|+||
T Consensus 3 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~------------------~D~~~~~~v~~~~~~~g~id~lv 64 (223)
T 3uce_A 3 GSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG------------------LDISDEKSVYHYFETIGAFDHLI 64 (223)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT------------------CCTTCHHHHHHHHHHHCSEEEEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc------------------cCCCCHHHHHHHHHHhCCCCEEE
Confidence 457899999999999999999999999999999999764 8999999988743 46899999
Q ss_pred eccCCCCCCC----CCCCCCCchhHHHHHHHHHHHHHhccC---CCeEEEEccccccccC
Q 028043 157 CCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSALPSS---LKRIVLVSSVGVTKFN 209 (214)
Q Consensus 157 ~~Ag~~~~~~----~~~~~~~~~~~vNv~g~~~l~~a~~~~---~~~iV~vSS~~~~~~~ 209 (214)
||||...... ...++..+.+++|+.|+.++++++.+. .++||++||.+++.+.
T Consensus 65 ~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~ 124 (223)
T 3uce_A 65 VTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVV 124 (223)
T ss_dssp ECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCC
T ss_pred ECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCC
Confidence 9999863211 222334566799999999999988432 3589999999886543
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=99.79 E-value=5.9e-20 Score=156.16 Aligned_cols=127 Identities=20% Similarity=0.227 Sum_probs=96.1
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHH---hccc-----CCCCEEEEEecCCChhccchhh----h
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTL---FGKQ-----DEETLQVCKGDTRNPKDLDPAI----F 149 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~---~~~~-----~~~~~~~v~~Di~d~~~v~~~~----~ 149 (214)
+|+|+||||+||||++++++|+++|++|++++|+....++. .+.. .+.++.++.+|++|++++++++ .
T Consensus 2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 81 (327)
T 1jtv_A 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE 81 (327)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhc
Confidence 68999999999999999999999999998887764433221 1111 1356889999999999988743 2
Q ss_pred CCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
+++|+||||||...... ...++..+.+++|+.|+.++++++ +.+.++||++||.+++..
T Consensus 82 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~ 148 (327)
T 1jtv_A 82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMG 148 (327)
T ss_dssp SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSC
T ss_pred CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccC
Confidence 46999999999764221 122334567899999999999975 236689999999987653
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=2.3e-19 Score=155.22 Aligned_cols=129 Identities=15% Similarity=0.140 Sum_probs=95.1
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHH-----------------HHhc--ccCCCCEEEEEecCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKAT-----------------TLFG--KQDEETLQVCKGDTR 139 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~-----------------~~~~--~~~~~~~~~v~~Di~ 139 (214)
...+++||||||+|+||++++++|+++|++|++++|...... .+.+ .....+++++.+|++
T Consensus 8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~ 87 (404)
T 1i24_A 8 HHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDIC 87 (404)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTT
T ss_pred ccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCC
Confidence 356889999999999999999999999999999998753321 1110 011356889999999
Q ss_pred ChhccchhhhCC--CcEEEeccCCCCCCCCCCCCC---CchhHHHHHHHHHHHHHhcc-CC-CeEEEEccccccccC
Q 028043 140 NPKDLDPAIFEG--VTHVICCTGTTAFPSRRWDGD---NTPEKVDWEGVRNLVSALPS-SL-KRIVLVSSVGVTKFN 209 (214)
Q Consensus 140 d~~~v~~~~~~~--~d~li~~Ag~~~~~~~~~~~~---~~~~~vNv~g~~~l~~a~~~-~~-~~iV~vSS~~~~~~~ 209 (214)
|+++++++ +.+ +|+|||+||...... .+.++ ...+++|+.|+.++++++++ +. ++||++||.++|+..
T Consensus 88 d~~~~~~~-~~~~~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vyg~~ 162 (404)
T 1i24_A 88 DFEFLAES-FKSFEPDSVVHFGEQRSAPY-SMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTP 162 (404)
T ss_dssp SHHHHHHH-HHHHCCSEEEECCSCCCHHH-HTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCC
T ss_pred CHHHHHHH-HhccCCCEEEECCCCCCccc-hhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHhCCC
Confidence 99998874 454 999999999764211 11122 23678999999999999854 55 599999999988743
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1e-19 Score=155.23 Aligned_cols=124 Identities=16% Similarity=0.185 Sum_probs=96.1
Q ss_pred CEEEEEcCchHHHHHHHHHHHHC-CCeEEEEEcCh--hHHHHHhcccCCCCEEEEEecCCChhccchhhhC--CCcEEEe
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDP--EKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVIC 157 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~-G~~V~~~~r~~--~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~--~~d~li~ 157 (214)
|+|+||||+|+||++++++|++. |++|++++|+. ...+.+.+.....+++++.+|++|.++++++ +. ++|+|||
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~~~d~vih 79 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRI-FEQYQPDAVMH 79 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHH-HHHHCCSEEEE
T ss_pred CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHH-HhhcCCCEEEE
Confidence 46999999999999999999998 79999999865 2222222111235788999999999999874 54 8999999
Q ss_pred ccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-c--CCC-------eEEEEcccccccc
Q 028043 158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-S--SLK-------RIVLVSSVGVTKF 208 (214)
Q Consensus 158 ~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~--~~~-------~iV~vSS~~~~~~ 208 (214)
|||.... ....++....+++|+.|+.++++++. . +++ +||++||.++|+.
T Consensus 80 ~A~~~~~-~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~ 139 (361)
T 1kew_A 80 LAAESHV-DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGD 139 (361)
T ss_dssp CCSCCCH-HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCC
T ss_pred CCCCcCh-hhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCC
Confidence 9997641 11123455678999999999999884 3 555 9999999988864
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=7.8e-20 Score=148.53 Aligned_cols=121 Identities=15% Similarity=0.095 Sum_probs=94.4
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------h--CC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------F--EG 151 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~--~~ 151 (214)
.++|+++||||+||||++++++|+++|++|++++|++++.+ ....++.+|++|++++++++ + ++
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~--------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~ 76 (241)
T 1dhr_A 5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA--------SASVIVKMTDSFTEQADQVTAEVGKLLGDQK 76 (241)
T ss_dssp -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS--------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc--------CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence 46799999999999999999999999999999999876532 13567789999999887643 3 58
Q ss_pred CcEEEeccCCCCCCCC----CCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEcccccccc
Q 028043 152 VTHVICCTGTTAFPSR----RWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~~----~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~~ 208 (214)
+|+||||||....... ..++....+++|+.|+.++++++.+ ..++||++||.+++.+
T Consensus 77 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 140 (241)
T 1dhr_A 77 VDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDG 140 (241)
T ss_dssp EEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC
T ss_pred CCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccC
Confidence 9999999998642111 1122355678999999999998733 2369999999988654
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.79 E-value=3.4e-20 Score=147.08 Aligned_cols=116 Identities=20% Similarity=0.227 Sum_probs=96.7
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC--eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
++|+|+||||+|+||++++++|+++|+ +|++++|++++ ...+++++.+|++|+++++++ + +|+||||
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~--------~~~~~~~~~~D~~~~~~~~~~-~--~d~vi~~ 72 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA--------EHPRLDNPVGPLAELLPQLDG-S--IDTAFCC 72 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC--------CCTTEECCBSCHHHHGGGCCS-C--CSEEEEC
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc--------cCCCceEEeccccCHHHHHHh-h--hcEEEEC
Confidence 468999999999999999999999998 99999998765 135688889999999999875 4 9999999
Q ss_pred cCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccccccccCC
Q 028043 159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNE 210 (214)
Q Consensus 159 Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~~~ 210 (214)
||..... ..+....+++|+.++.+++++++ .+.+++|++||.++++...
T Consensus 73 a~~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~ 122 (215)
T 2a35_A 73 LGTTIKE---AGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKSS 122 (215)
T ss_dssp CCCCHHH---HSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCS
T ss_pred eeecccc---CCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCCCCc
Confidence 9976421 23445677999999999999885 4778999999999876543
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=1.2e-19 Score=155.89 Aligned_cols=125 Identities=18% Similarity=0.218 Sum_probs=95.3
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhH-----HHHHhccc---CCCCEEEEEecCCChhccchhhhC-CCc
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-----ATTLFGKQ---DEETLQVCKGDTRNPKDLDPAIFE-GVT 153 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~-----~~~~~~~~---~~~~~~~v~~Di~d~~~v~~~~~~-~~d 153 (214)
|+|+||||+|+||++++++|+++|++|++++|+++. ++.+.+.. ...+++++.+|++|++++.+++-+ ++|
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 104 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPT 104 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCCC
Confidence 789999999999999999999999999999998643 22221110 134688999999999998875322 589
Q ss_pred EEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CC---CeEEEEcccccccc
Q 028043 154 HVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL---KRIVLVSSVGVTKF 208 (214)
Q Consensus 154 ~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~---~~iV~vSS~~~~~~ 208 (214)
+||||||..... ..+++....+++|+.|+.++++++++ +. ++||++||.++|+.
T Consensus 105 ~vih~A~~~~~~-~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~ 162 (375)
T 1t2a_A 105 EIYNLGAQSHVK-ISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGK 162 (375)
T ss_dssp EEEECCSCCCHH-HHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCS
T ss_pred EEEECCCccccc-ccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCC
Confidence 999999975421 11234456789999999999998854 55 79999999999874
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.7e-18 Score=153.99 Aligned_cols=125 Identities=22% Similarity=0.247 Sum_probs=99.9
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHC---CCeEEEEEcChhHHH---HHhcccC--------------CCCEEEEEec
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSR---NIKSRLLLRDPEKAT---TLFGKQD--------------EETLQVCKGD 137 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~---G~~V~~~~r~~~~~~---~~~~~~~--------------~~~~~~v~~D 137 (214)
....+|+|+||||+|+||++++++|+++ |++|++++|+++..+ .+.+.+. ..+++++.+|
T Consensus 69 ~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~D 148 (478)
T 4dqv_A 69 PSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGD 148 (478)
T ss_dssp CCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECC
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeE
Confidence 4457899999999999999999999998 999999999865432 2222222 2579999999
Q ss_pred CCC------hhccchhhhCCCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEcccccccc
Q 028043 138 TRN------PKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 138 i~d------~~~v~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~ 208 (214)
+++ .+.+++ ++.++|+||||||.... ......+++|+.|+.+++++++ .+.++||++||.++|+.
T Consensus 149 l~~~~~gld~~~~~~-~~~~~D~Vih~Aa~~~~-----~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~ 220 (478)
T 4dqv_A 149 KSEPDLGLDQPMWRR-LAETVDLIVDSAAMVNA-----FPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAA 220 (478)
T ss_dssp TTSGGGGCCHHHHHH-HHHHCCEEEECCSSCSB-----SSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTT
T ss_pred CCCcccCCCHHHHHH-HHcCCCEEEECccccCC-----cCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCc
Confidence 984 445655 36789999999998753 3455778999999999999985 47789999999988764
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.78 E-value=2e-19 Score=146.40 Aligned_cols=120 Identities=19% Similarity=0.151 Sum_probs=95.4
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHH-CCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh----hCCCcEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLS-RNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI----FEGVTHV 155 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~----~~~~d~l 155 (214)
++|+++||||+||||++++++|++ .|++|++++|+++.. ...+.++.+|++|++++++++ ++++|+|
T Consensus 3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~--------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~id~l 74 (244)
T 4e4y_A 3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS--------AENLKFIKADLTKQQDITNVLDIIKNVSFDGI 74 (244)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC--------CTTEEEEECCTTCHHHHHHHHHHTTTCCEEEE
T ss_pred CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc--------cccceEEecCcCCHHHHHHHHHHHHhCCCCEE
Confidence 578999999999999999999999 799999999876421 235788999999999988743 2389999
Q ss_pred EeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhccC---CCeEEEEcccccccc
Q 028043 156 ICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPSS---LKRIVLVSSVGVTKF 208 (214)
Q Consensus 156 i~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~~---~~~iV~vSS~~~~~~ 208 (214)
|||||...... ...+++++.+++|+.|++++++++.+. .++||++||.+++.+
T Consensus 75 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~ 133 (244)
T 4e4y_A 75 FLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIA 133 (244)
T ss_dssp EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCC
T ss_pred EECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccC
Confidence 99999865321 222344667899999999999988442 258999999988654
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=1.1e-19 Score=153.78 Aligned_cols=124 Identities=22% Similarity=0.217 Sum_probs=94.3
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh----hHHHHHhcccCCCCEEEEEecCCChhccchhhhC-CCcEEEe
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP----EKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-GVTHVIC 157 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~----~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~-~~d~li~ 157 (214)
|+|+||||+|+||++++++|+++|++|++++|.. +..+.+.+ ..+.++.++.+|++|++++++++-+ ++|+|||
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih 79 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIER-LGGKHPTFVEGDIRNEALMTEILHDHAIDTVIH 79 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHH-HHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHh-hcCCcceEEEccCCCHHHHHHHhhccCCCEEEE
Confidence 4799999999999999999999999999998642 22222211 1134578899999999998875322 6999999
Q ss_pred ccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEcccccccc
Q 028043 158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 158 ~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~ 208 (214)
|||...... ..++....+++|+.|+.+++++++ .+.++||++||.++|+.
T Consensus 80 ~A~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~ 130 (338)
T 1udb_A 80 FAGLKAVGE-SVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGD 130 (338)
T ss_dssp CCSCCCHHH-HHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCS
T ss_pred CCccCcccc-chhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCC
Confidence 999754211 112344578999999999999884 47789999999998863
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.78 E-value=1.9e-19 Score=152.31 Aligned_cols=121 Identities=15% Similarity=0.122 Sum_probs=95.6
Q ss_pred CEEEEEcCchHHHHHHHHHHHHC-CCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCCh-hccchhhhCCCcEEEeccC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP-KDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~-~~v~~~~~~~~d~li~~Ag 160 (214)
|+|+||||+|+||++++++|+++ |++|++++|++++.+.+. ...+++++.+|++|. +.+++ ++.++|+|||+||
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~-~~~~~d~vih~A~ 76 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL---NHPHFHFVEGDISIHSEWIEY-HVKKCDVVLPLVA 76 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT---TCTTEEEEECCTTTCSHHHHH-HHHHCSEEEECBC
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh---cCCCeEEEeccccCcHHHHHh-hccCCCEEEEccc
Confidence 57999999999999999999998 899999999887654432 235789999999984 45665 4568999999999
Q ss_pred CCCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEEcccccccc
Q 028043 161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 161 ~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~vSS~~~~~~ 208 (214)
..... ....+....+++|+.|+.++++++++..++||++||.++|+.
T Consensus 77 ~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~SS~~v~g~ 123 (345)
T 2bll_A 77 IATPI-EYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGM 123 (345)
T ss_dssp CCCHH-HHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBT
T ss_pred ccCcc-chhcCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEecHHHcCC
Confidence 76421 111234557789999999999998542289999999998864
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.2e-18 Score=152.52 Aligned_cols=121 Identities=19% Similarity=0.279 Sum_probs=93.4
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhH---HHHHhccc-----------CCCCEEEEEecCCChhcc
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK---ATTLFGKQ-----------DEETLQVCKGDTRNPKDL 144 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~---~~~~~~~~-----------~~~~~~~v~~Di~d~~~v 144 (214)
...+|+|+||||+|+||++++++|++.|++|++++|+++. .+.+.+.+ ...++.++.+|++|++++
T Consensus 66 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l 145 (427)
T 4f6c_A 66 HRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV 145 (427)
T ss_dssp CCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCC
T ss_pred CCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccC
Confidence 3467899999999999999999999999999999998762 22211110 135789999999999999
Q ss_pred chhhhCCCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEEccccc
Q 028043 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGV 205 (214)
Q Consensus 145 ~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~vSS~~~ 205 (214)
. .++++|+||||||.... ..+....+++|+.|+.+++++++.+.++||++||.++
T Consensus 146 ~--~~~~~d~Vih~A~~~~~----~~~~~~~~~~Nv~g~~~l~~aa~~~~~~~v~~SS~~~ 200 (427)
T 4f6c_A 146 V--LPENMDTIIHAGARTDH----FGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV 200 (427)
T ss_dssp C--CSSCCSEEEECCCCC-----------CHHHHHHHHHHHHHHHHHHTTCEEEEEEEGGG
T ss_pred C--CcCCCCEEEECCcccCC----CCCHHHHHHHHHHHHHHHHHHHHhcCCcEEEECchHh
Confidence 8 46899999999998742 2345678899999999999999667889999999988
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=99.77 E-value=5.1e-19 Score=144.03 Aligned_cols=120 Identities=8% Similarity=-0.071 Sum_probs=90.6
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEE-E--cChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLL-L--RDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~-~--r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
||+++||||+||||++++++|+++|++|+++ + |++++++++.+++ .+. |+.|++++++++ ++++
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~--~~~-----~~~~~~~v~~~~~~~~~~~g~i 73 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN--PGT-----IALAEQKPERLVDATLQHGEAI 73 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS--TTE-----EECCCCCGGGHHHHHGGGSSCE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh--CCC-----cccCHHHHHHHHHHHHHHcCCC
Confidence 5899999999999999999999999999999 6 9998887765544 122 233555555422 4689
Q ss_pred cEEEeccCCCCC---CC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 153 THVICCTGTTAF---PS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 153 d~li~~Ag~~~~---~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
|+||||||.... .. ...++.+..+++|+.|+.++++++ +.+.++||++||.+++.+
T Consensus 74 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~ 140 (244)
T 1zmo_A 74 DTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKP 140 (244)
T ss_dssp EEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSC
T ss_pred CEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCC
Confidence 999999998653 11 122334567899999999999876 235679999999988654
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.76 E-value=8.1e-20 Score=152.71 Aligned_cols=118 Identities=10% Similarity=0.068 Sum_probs=95.7
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHC--CCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhC--CCcEEEe
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSR--NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVIC 157 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~--~~d~li~ 157 (214)
+|+|+||||+|+||++++++|+++ |++|++++|++...+ +. .+++++.+|++|.++++++ +. ++|+|||
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~-----~~~~~~~~D~~d~~~~~~~-~~~~~~d~vih 74 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-VV-----NSGPFEVVNALDFNQIEHL-VEVHKITDIYL 74 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-HH-----HSSCEEECCTTCHHHHHHH-HHHTTCCEEEE
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-cc-----CCCceEEecCCCHHHHHHH-HhhcCCCEEEE
Confidence 578999999999999999999998 899999999865422 11 2356889999999999874 45 8999999
Q ss_pred ccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEcccccccc
Q 028043 158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 158 ~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~ 208 (214)
+||..... ...+....+++|+.|+.+++++++ .+.+++|++||.++|+.
T Consensus 75 ~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~ 124 (312)
T 2yy7_A 75 MAALLSAT--AEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGP 124 (312)
T ss_dssp CCCCCHHH--HHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCT
T ss_pred CCccCCCc--hhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCC
Confidence 99975421 112445678999999999999985 47789999999999875
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=1.9e-19 Score=147.03 Aligned_cols=110 Identities=14% Similarity=0.219 Sum_probs=89.8
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh--h-CCCcEEEec
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--F-EGVTHVICC 158 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~--~-~~~d~li~~ 158 (214)
+|+++||||+||||++++++|+++|++|++++|++++.+. . +.+|++|++++++++ + +++|+||||
T Consensus 1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~----------~-~~~Dl~~~~~v~~~~~~~~~~id~lv~~ 69 (257)
T 1fjh_A 1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA----------D-LSTAEGRKQAIADVLAKCSKGMDGLVLC 69 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC----------C-TTSHHHHHHHHHHHHTTCTTCCSEEEEC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc----------c-cccCCCCHHHHHHHHHHhCCCCCEEEEC
Confidence 4789999999999999999999999999999998754321 1 568999999888643 3 678999999
Q ss_pred cCCCCCCCCCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccc
Q 028043 159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVT 206 (214)
Q Consensus 159 Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~ 206 (214)
||.... . ...+..+++|+.|+.++++++ +.+.++||++||.+++
T Consensus 70 Ag~~~~-~---~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~ 118 (257)
T 1fjh_A 70 AGLGPQ-T---KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASA 118 (257)
T ss_dssp CCCCTT-C---SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGG
T ss_pred CCCCCC-c---ccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhh
Confidence 997641 1 235678899999999999977 2355899999999887
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.76 E-value=1.1e-18 Score=144.24 Aligned_cols=108 Identities=28% Similarity=0.416 Sum_probs=91.6
Q ss_pred CEEEEEcCchHHHHHHHHHHHHC--CCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSR--NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
|+|+||||+|+||++++++|+++ |++|++++|++++.+++. ..+++++.+|++|+++++++ +.++|+|||+||
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~----~~~~~~~~~D~~d~~~l~~~-~~~~d~vi~~a~ 75 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA----DQGVEVRHGDYNQPESLQKA-FAGVSKLLFISG 75 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH----HTTCEEEECCTTCHHHHHHH-TTTCSEEEECCC
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh----hcCCeEEEeccCCHHHHHHH-HhcCCEEEEcCC
Confidence 57999999999999999999998 999999999887655443 24578899999999999874 788999999999
Q ss_pred CCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEcccccc
Q 028043 161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVT 206 (214)
Q Consensus 161 ~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~ 206 (214)
... . .++|+.++.+++++++ .+.++||++||.+++
T Consensus 76 ~~~------~-----~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~ 111 (287)
T 2jl1_A 76 PHY------D-----NTLLIVQHANVVKAARDAGVKHIAYTGYAFAE 111 (287)
T ss_dssp CCS------C-----HHHHHHHHHHHHHHHHHTTCSEEEEEEETTGG
T ss_pred CCc------C-----chHHHHHHHHHHHHHHHcCCCEEEEECCCCCC
Confidence 531 1 1689999999999985 578899999998875
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.76 E-value=4.3e-18 Score=141.13 Aligned_cols=108 Identities=18% Similarity=0.218 Sum_probs=91.8
Q ss_pred CEEEEEcCchHHHHHHHHHHHHC-CCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccCC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGT 161 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag~ 161 (214)
|+|+||||+|+||++++++|++. |++|++++|++++.+.+. ..+++++.+|++|++++++ ++.++|+|||+||.
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~----~~~v~~~~~D~~d~~~l~~-~~~~~d~vi~~a~~ 75 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDW----RGKVSVRQLDYFNQESMVE-AFKGMDTVVFIPSI 75 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGG----BTTBEEEECCTTCHHHHHH-HTTTCSEEEECCCC
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhh----hCCCEEEEcCCCCHHHHHH-HHhCCCEEEEeCCC
Confidence 46999999999999999999998 999999999988755433 4578999999999999987 47899999999986
Q ss_pred CCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEcccccc
Q 028043 162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVT 206 (214)
Q Consensus 162 ~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~ 206 (214)
... ...|+.++.+++++++ .++++||++||.+..
T Consensus 76 ~~~-----------~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~~ 110 (289)
T 3e48_A 76 IHP-----------SFKRIPEVENLVYAAKQSGVAHIIFIGYYADQ 110 (289)
T ss_dssp CCS-----------HHHHHHHHHHHHHHHHHTTCCEEEEEEESCCS
T ss_pred Ccc-----------chhhHHHHHHHHHHHHHcCCCEEEEEcccCCC
Confidence 531 2568999999999985 578999999997653
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.76 E-value=5e-19 Score=139.55 Aligned_cols=110 Identities=18% Similarity=0.170 Sum_probs=87.2
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh--hCCCcEEEeccC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--FEGVTHVICCTG 160 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~--~~~~d~li~~Ag 160 (214)
|+++||||+||||++++++|+ +|++|++++|+++ .+.+|++|++++++++ ++++|+||||||
T Consensus 4 M~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~---------------~~~~D~~~~~~~~~~~~~~~~~d~vi~~ag 67 (202)
T 3d7l_A 4 MKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG---------------DVTVDITNIDSIKKMYEQVGKVDAIVSATG 67 (202)
T ss_dssp CEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS---------------SEECCTTCHHHHHHHHHHHCCEEEEEECCC
T ss_pred cEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc---------------ceeeecCCHHHHHHHHHHhCCCCEEEECCC
Confidence 379999999999999999999 9999999999764 3679999999988743 346999999999
Q ss_pred CCCCCC---CCCCCCCchhHHHHHHHHHHHHHhccC---CCeEEEEcccccccc
Q 028043 161 TTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPSS---LKRIVLVSSVGVTKF 208 (214)
Q Consensus 161 ~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~~---~~~iV~vSS~~~~~~ 208 (214)
...... ...++..+.+++|+.|+.++++++.+. .++||++||.+++.+
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~ 121 (202)
T 3d7l_A 68 SATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMEDP 121 (202)
T ss_dssp CCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTSC
T ss_pred CCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcCC
Confidence 764221 111223456689999999999988442 379999999887653
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=1.5e-19 Score=151.42 Aligned_cols=120 Identities=22% Similarity=0.263 Sum_probs=93.4
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhC--CCcEEEeccC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVICCTG 160 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~--~~d~li~~Ag 160 (214)
|+|+||||+|+||++++++|+++|++|++++|......+ .+ ..+++++.+|++|+++++++ +. ++|+|||+||
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~---~~-~~~~~~~~~Dl~~~~~~~~~-~~~~~~d~vi~~a~ 75 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE---NV-PKGVPFFRVDLRDKEGVERA-FREFRPTHVSHQAA 75 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG---GS-CTTCCEECCCTTCHHHHHHH-HHHHCCSEEEECCS
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh---hc-ccCeEEEECCCCCHHHHHHH-HHhcCCCEEEECcc
Confidence 479999999999999999999999999999985432111 11 13567889999999998874 44 7999999999
Q ss_pred CCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccc-ccccc
Q 028043 161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSV-GVTKF 208 (214)
Q Consensus 161 ~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~-~~~~~ 208 (214)
..... ..++++...+++|+.|+.+++++++ .+.++||++||. ++|+.
T Consensus 76 ~~~~~-~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~ 124 (311)
T 2p5y_A 76 QASVK-VSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGE 124 (311)
T ss_dssp CCCHH-HHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCC
T ss_pred ccCch-hhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCC
Confidence 75421 1123445678999999999999885 467899999998 66653
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=5.2e-19 Score=144.82 Aligned_cols=121 Identities=11% Similarity=-0.040 Sum_probs=88.5
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCCCc
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGVT 153 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~~d 153 (214)
+|+++||||+||||++++++|+++|++|++++|++++.+++.+ +. +.++..+ |++++++++ ++++|
T Consensus 1 Mk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~~~~~~~~-----d~~~v~~~~~~~~~~~g~iD 74 (254)
T 1zmt_A 1 MSTAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAETYPQLKPM-----SEQEPAELIEAVTSAYGQVD 74 (254)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHHCTTSEEC-----CCCSHHHHHHHHHHHHSCCC
T ss_pred CeEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhcCCcEEEE-----CHHHHHHHHHHHHHHhCCCC
Confidence 4789999999999999999999999999999999877665433 21 2233333 444444321 56899
Q ss_pred EEEeccCCC-CCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 154 HVICCTGTT-AFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 154 ~li~~Ag~~-~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
+||||||.. .... ...++.+..+++|+.|+.++++++ +.+.++||++||.+++.+
T Consensus 75 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 138 (254)
T 1zmt_A 75 VLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGP 138 (254)
T ss_dssp EEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSC
T ss_pred EEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccC
Confidence 999999986 3211 122334667899999999999876 235689999999988654
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.76 E-value=2.9e-19 Score=145.09 Aligned_cols=113 Identities=15% Similarity=0.224 Sum_probs=90.7
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhh---CCCcEEEec
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF---EGVTHVICC 158 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~---~~~d~li~~ 158 (214)
||+|+||||+||||++++++|+++|++|++++|++++.+. .+.+|++|.+++++++- +++|+||||
T Consensus 1 Mk~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----------~~~~D~~~~~~~~~~~~~~~~~~d~vi~~ 69 (255)
T 2dkn_A 1 MSVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA-----------DLSTPGGRETAVAAVLDRCGGVLDGLVCC 69 (255)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-----------CTTSHHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred CcEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc-----------cccCCcccHHHHHHHHHHcCCCccEEEEC
Confidence 4789999999999999999999999999999998754321 15689999988886432 589999999
Q ss_pred cCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEccccccccC
Q 028043 159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 159 Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~~~~~ 209 (214)
||.... .......+++|+.|+.++++++. .+.++||++||.++++..
T Consensus 70 Ag~~~~----~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~ 121 (255)
T 2dkn_A 70 AGVGVT----AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPG 121 (255)
T ss_dssp CCCCTT----SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTT
T ss_pred CCCCCc----chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEecccccccc
Confidence 997641 13456678999999999999762 245899999999987643
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=2.2e-19 Score=154.55 Aligned_cols=125 Identities=15% Similarity=0.180 Sum_probs=94.7
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhH-----HHHHhcccC--CC-CEEEEEecCCChhccchhhhC-CCc
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-----ATTLFGKQD--EE-TLQVCKGDTRNPKDLDPAIFE-GVT 153 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~-----~~~~~~~~~--~~-~~~~v~~Di~d~~~v~~~~~~-~~d 153 (214)
|+|+||||+|+||++++++|+++|++|++++|+.+. ++.+..... +. +++++.+|++|.+++.+++-+ ++|
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 108 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD 108 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCCC
Confidence 799999999999999999999999999999998654 222211110 12 688999999999998874322 589
Q ss_pred EEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CC-----CeEEEEcccccccc
Q 028043 154 HVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL-----KRIVLVSSVGVTKF 208 (214)
Q Consensus 154 ~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~-----~~iV~vSS~~~~~~ 208 (214)
+|||+||..... ..+++....+++|+.|+.++++++++ +. ++||++||.++|+.
T Consensus 109 ~Vih~A~~~~~~-~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~ 168 (381)
T 1n7h_A 109 EVYNLAAQSHVA-VSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGS 168 (381)
T ss_dssp EEEECCSCCCHH-HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTT
T ss_pred EEEECCcccCcc-ccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCC
Confidence 999999976421 11234456789999999999998843 33 39999999998874
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=2.1e-18 Score=146.36 Aligned_cols=123 Identities=16% Similarity=0.163 Sum_probs=91.6
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHH-HhcccCCCCEEEEEecCCChhccchhhhCCCcEEE
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATT-LFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVI 156 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li 156 (214)
..+++|+|+||||+|+||++++++|+++|++|++++|+...... +.......+++++.+|+.|.. +.++|+||
T Consensus 23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------~~~~d~vi 96 (343)
T 2b69_A 23 MEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL------YIEVDQIY 96 (343)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCC------CCCCSEEE
T ss_pred cccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCChh------hcCCCEEE
Confidence 44578999999999999999999999999999999997532211 111112356889999998752 45799999
Q ss_pred eccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CCCeEEEEcccccccc
Q 028043 157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 157 ~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~~~iV~vSS~~~~~~ 208 (214)
|+||...... ...++...+++|+.|+.+++++++. + .++|++||.++|+.
T Consensus 97 h~A~~~~~~~-~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~v~g~ 147 (343)
T 2b69_A 97 HLASPASPPN-YMYNPIKTLKTNTIGTLNMLGLAKRVG-ARLLLASTSEVYGD 147 (343)
T ss_dssp ECCSCCSHHH-HTTCHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEEEGGGGBS
T ss_pred ECccccCchh-hhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEECcHHHhCC
Confidence 9999764211 1234456789999999999999854 5 49999999998864
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=99.75 E-value=6.1e-19 Score=161.49 Aligned_cols=131 Identities=17% Similarity=0.097 Sum_probs=90.9
Q ss_pred CCCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEc---------ChhHHHHHhcccCCCCEEEEEecCCChhccchh
Q 028043 77 TPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR---------DPEKATTLFGKQDEETLQVCKGDTRNPKDLDPA 147 (214)
Q Consensus 77 ~~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~ 147 (214)
...+++|+++||||+||||+++|++|+++|++|++++| +.+.++++.+++..... ...+|++|.+++++.
T Consensus 14 ~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~D~~d~~~~~~~ 92 (613)
T 3oml_A 14 KLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGG-EAVADYNSVIDGAKV 92 (613)
T ss_dssp -CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTC-CEEECCCCGGGHHHH
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCC-eEEEEeCCHHHHHHH
Confidence 36678999999999999999999999999999999988 55555554443321111 134899999877653
Q ss_pred h------hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 148 I------FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 148 ~------~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
+ ++++|+||||||+..... ...+++...+++|+.|++++++++ +.+.++||++||.++...
T Consensus 93 ~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~ 167 (613)
T 3oml_A 93 IETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYG 167 (613)
T ss_dssp HC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHC
T ss_pred HHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCC
Confidence 3 458999999999875321 222344667899999999999977 235579999999877543
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=99.75 E-value=1.4e-18 Score=153.90 Aligned_cols=128 Identities=15% Similarity=0.086 Sum_probs=98.8
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChh--HHHHHhcccCCCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE--KATTLFGKQDEETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~--~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
..+.+|+++||||+||||++++++|+++|++|++++|+.. .+++..+.. ++.++.+|++|.+++++.+ +
T Consensus 209 ~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~---~~~~~~~Dvtd~~~v~~~~~~~~~~~ 285 (454)
T 3u0b_A 209 KPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKV---GGTALTLDVTADDAVDKITAHVTEHH 285 (454)
T ss_dssp STTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHH---TCEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred cCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc---CCeEEEEecCCHHHHHHHHHHHHHHc
Confidence 3457899999999999999999999999999999999643 333333322 3578999999999988743 3
Q ss_pred CC-CcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhcc-----CCCeEEEEcccccccc
Q 028043 150 EG-VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS-----SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 150 ~~-~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~-----~~~~iV~vSS~~~~~~ 208 (214)
++ +|+||||||+..... .+.++....+++|+.|+.++.+++.+ ..++||++||.++...
T Consensus 286 g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g 353 (454)
T 3u0b_A 286 GGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAG 353 (454)
T ss_dssp TTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHC
T ss_pred CCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCC
Confidence 44 999999999875321 23334456789999999999998732 4579999999887643
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.75 E-value=1.6e-18 Score=139.98 Aligned_cols=117 Identities=21% Similarity=0.220 Sum_probs=91.9
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh-----hCCCcEEE
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-----FEGVTHVI 156 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~-----~~~~d~li 156 (214)
+|+++||||+||||++++++|+++|++|++++|+++ . ..+.++.+|++|++++++++ ++++|+||
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~---------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~li 71 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G---------EDLIYVEGDVTREEDVRRAVARAQEEAPLFAVV 71 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S---------SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEEE
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c---------cceEEEeCCCCCHHHHHHHHHHHHhhCCceEEE
Confidence 689999999999999999999999999999999875 1 23478999999999988743 24899999
Q ss_pred eccCCCCCCCC---CCC----CCCchhHHHHHHHHHHHHHhc----c-C---C---CeEEEEcccccccc
Q 028043 157 CCTGTTAFPSR---RWD----GDNTPEKVDWEGVRNLVSALP----S-S---L---KRIVLVSSVGVTKF 208 (214)
Q Consensus 157 ~~Ag~~~~~~~---~~~----~~~~~~~vNv~g~~~l~~a~~----~-~---~---~~iV~vSS~~~~~~ 208 (214)
||||....... ..+ +..+.+++|+.|+.++++++. + + . ++||++||.+++.+
T Consensus 72 ~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~ 141 (242)
T 1uay_A 72 SAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEG 141 (242)
T ss_dssp ECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHC
T ss_pred EcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccC
Confidence 99998653211 111 335667899999999999762 1 1 1 29999999987654
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.6e-18 Score=158.47 Aligned_cols=129 Identities=19% Similarity=0.124 Sum_probs=93.5
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh---------hHHHHHhcccCCCCEEEEEecCCChhccchhh
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP---------EKATTLFGKQDEETLQVCKGDTRNPKDLDPAI 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~---------~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~ 148 (214)
+.+++|+++||||++|||++++++|+++|++|++.+|+. +.++++.+++...+.. ..+|++|.+++++.+
T Consensus 4 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~-~~~d~~d~~~~~~~v 82 (604)
T 2et6_A 4 VDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGV-AVADYNNVLDGDKIV 82 (604)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCE-EEEECCCTTCHHHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCe-EEEEcCCHHHHHHHH
Confidence 456789999999999999999999999999999998764 4455444433211112 236887776655422
Q ss_pred ------hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEccccccc
Q 028043 149 ------FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTK 207 (214)
Q Consensus 149 ------~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~ 207 (214)
++++|+||||||+..... .+.++++..+++|+.|++++++++ +++.++||++||.++..
T Consensus 83 ~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~ 155 (604)
T 2et6_A 83 ETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLY 155 (604)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH
T ss_pred HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcC
Confidence 689999999999864221 223345677899999999999876 23457999999987754
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=99.74 E-value=6.3e-19 Score=147.51 Aligned_cols=117 Identities=15% Similarity=0.166 Sum_probs=84.6
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhH----HHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEE
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK----ATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHV 155 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~----~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~l 155 (214)
+++|+|+||||+|+||++++++|+++|++|++++|+... .+.+.......+++++.+|++ ++|+|
T Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----------~~d~v 73 (321)
T 3vps_A 5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS-----------DVRLV 73 (321)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT-----------TEEEE
T ss_pred cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc-----------cCCEE
Confidence 457899999999999999999999999999999998752 221111111122333333333 79999
Q ss_pred EeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccccccccC
Q 028043 156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 156 i~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~~ 209 (214)
||+||..... ..+.+....++ |+.|+.+++++++ .+.++||++||.++|+..
T Consensus 74 i~~a~~~~~~-~~~~~~~~~~~-n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~ 126 (321)
T 3vps_A 74 YHLASHKSVP-RSFKQPLDYLD-NVDSGRHLLALCTSVGVPKVVVGSTCEVYGQA 126 (321)
T ss_dssp EECCCCCCHH-HHTTSTTTTHH-HHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSC
T ss_pred EECCccCChH-HHHhCHHHHHH-HHHHHHHHHHHHHHcCCCeEEEecCHHHhCCC
Confidence 9999987521 12234455667 9999999999985 478999999999998753
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=1.9e-18 Score=147.40 Aligned_cols=121 Identities=11% Similarity=0.070 Sum_probs=91.5
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCC-CeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhC----CCcE
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE----GVTH 154 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~----~~d~ 154 (214)
+++|+|+||||+|+||++++++|+++| ++|++++|++.... . ..+. ++. +.+|++|.+.+++++-+ ++|+
T Consensus 44 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~-~~~~--~~~-~~~d~~~~~~~~~~~~~~~~~~~d~ 118 (357)
T 2x6t_A 44 IEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-F-VNLV--DLN-IADYMDKEDFLIQIMAGEEFGDVEA 118 (357)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG-G-GGTT--TSC-CSEEEEHHHHHHHHHTTCCCSSCCE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch-h-hccc--Cce-EeeecCcHHHHHHHHhhcccCCCCE
Confidence 456899999999999999999999999 99999999765421 1 1111 222 67899998888764322 6999
Q ss_pred EEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccccccccC
Q 028043 155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 155 li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~~ 209 (214)
|||+||.... ...+....+++|+.|+.+++++++ .+. +||++||.++|+..
T Consensus 119 Vih~A~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS~~v~g~~ 170 (357)
T 2x6t_A 119 IFHEGACSST---TEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGR 170 (357)
T ss_dssp EEECCSCCCT---TCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGCSC
T ss_pred EEECCcccCC---ccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcchHHhCCC
Confidence 9999997653 223456678999999999999985 466 99999999998754
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=1.5e-18 Score=145.67 Aligned_cols=109 Identities=13% Similarity=0.095 Sum_probs=89.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhC--CCcEEEec
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVICC 158 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~--~~d~li~~ 158 (214)
++|+|+||||+|+||++++++|+++|++|++++|+. .+|++|.++++++ +. ++|+|||+
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~------------------~~D~~d~~~~~~~-~~~~~~d~vih~ 62 (321)
T 1e6u_A 2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD------------------ELNLLDSRAVHDF-FASERIDQVYLA 62 (321)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT------------------TCCTTCHHHHHHH-HHHHCCSEEEEC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc------------------cCCccCHHHHHHH-HHhcCCCEEEEc
Confidence 457999999999999999999999999999988763 2799999998874 55 89999999
Q ss_pred cCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEcccccccc
Q 028043 159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 159 Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~ 208 (214)
||..........+....+++|+.++.+++++++ .+.+++|++||.++|+.
T Consensus 63 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~ 113 (321)
T 1e6u_A 63 AAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPK 113 (321)
T ss_dssp CCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCT
T ss_pred CeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCC
Confidence 997631111112345677999999999999984 57789999999999864
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.73 E-value=1.1e-18 Score=161.61 Aligned_cols=128 Identities=21% Similarity=0.216 Sum_probs=97.0
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhH----HHHHhcccCCCCEEEEEecCCChhccchhhhC--C
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK----ATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--G 151 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~----~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~--~ 151 (214)
+.+++|+|+||||+|+||++++++|+++|++|++++|+... .+.+. .+...+++++.+|++|+++++++ +. +
T Consensus 7 ~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~-~~~~~~v~~v~~Dl~d~~~l~~~-~~~~~ 84 (699)
T 1z45_A 7 SESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLE-VLTKHHIPFYEVDLCDRKGLEKV-FKEYK 84 (699)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHH-HHHTSCCCEEECCTTCHHHHHHH-HHHSC
T ss_pred cccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHh-hccCCceEEEEcCCCCHHHHHHH-HHhCC
Confidence 44567999999999999999999999999999999987532 11111 11134678899999999998874 44 7
Q ss_pred CcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEcccccccc
Q 028043 152 VTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~ 208 (214)
+|+|||+||...... ..+...+.+++|+.|+.+++++++ .+.++||++||.++|+.
T Consensus 85 ~D~Vih~A~~~~~~~-~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~ 141 (699)
T 1z45_A 85 IDSVIHFAGLKAVGE-STQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGD 141 (699)
T ss_dssp CCEEEECCSCCCHHH-HHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCC
T ss_pred CCEEEECCcccCcCc-cccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCC
Confidence 999999999764211 112234568999999999999885 47889999999998863
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=2.7e-18 Score=146.30 Aligned_cols=115 Identities=20% Similarity=0.251 Sum_probs=95.7
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCC-----CeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCC---Cc
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRN-----IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEG---VT 153 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G-----~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~---~d 153 (214)
+|+|+||||+|+||++++++|+++| ++|++++|++.... ....+++++.+|++|.++++++ +.+ +|
T Consensus 1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-----~~~~~~~~~~~Dl~d~~~~~~~-~~~~~~~d 74 (364)
T 2v6g_A 1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-----HEDNPINYVQCDISDPDDSQAK-LSPLTDVT 74 (364)
T ss_dssp CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-----CCSSCCEEEECCTTSHHHHHHH-HTTCTTCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-----cccCceEEEEeecCCHHHHHHH-HhcCCCCC
Confidence 4789999999999999999999999 99999999875432 1235688999999999998874 555 99
Q ss_pred EEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEE-------EEcccccccc
Q 028043 154 HVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIV-------LVSSVGVTKF 208 (214)
Q Consensus 154 ~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV-------~vSS~~~~~~ 208 (214)
+|||+||... .+....+++|+.|+.++++++++ +++++| ++||.++|+.
T Consensus 75 ~vih~a~~~~------~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~ 133 (364)
T 2v6g_A 75 HVFYVTWANR------STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGK 133 (364)
T ss_dssp EEEECCCCCC------SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTT
T ss_pred EEEECCCCCc------chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccc
Confidence 9999999753 24456789999999999999954 578887 7999988875
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.73 E-value=6.7e-19 Score=146.56 Aligned_cols=115 Identities=18% Similarity=0.077 Sum_probs=88.4
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhC--CCcEEE
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVI 156 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~--~~d~li 156 (214)
.+++|+|+||||+|+||++++++|+++|+ +.... ...++.+.+|++|++++.++ +. ++|+||
T Consensus 3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~~---------~~~~~~~~~D~~d~~~~~~~-~~~~~~d~Vi 66 (319)
T 4b8w_A 3 YFQSMRILVTGGSGLVGKAIQKVVADGAG------LPGED---------WVFVSSKDADLTDTAQTRAL-FEKVQPTHVI 66 (319)
T ss_dssp CCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTCE---------EEECCTTTCCTTSHHHHHHH-HHHSCCSEEE
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHhcCC------ccccc---------ccccCceecccCCHHHHHHH-HhhcCCCEEE
Confidence 35689999999999999999999999998 11100 11233456899999999875 44 499999
Q ss_pred eccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccccccccC
Q 028043 157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 157 ~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~~ 209 (214)
|+||........++++...+++|+.|+.+++++++ .+.+++|++||.++|+..
T Consensus 67 h~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~ 120 (319)
T 4b8w_A 67 HLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDK 120 (319)
T ss_dssp ECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSS
T ss_pred ECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCC
Confidence 99998542112234556678999999999999984 578899999999998753
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=99.73 E-value=5e-18 Score=152.81 Aligned_cols=129 Identities=16% Similarity=0.042 Sum_probs=97.5
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCe-EEEE-EcCh-------------hHHHHHhcccC--CCCEEEEEecCCChh
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIK-SRLL-LRDP-------------EKATTLFGKQD--EETLQVCKGDTRNPK 142 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~-V~~~-~r~~-------------~~~~~~~~~~~--~~~~~~v~~Di~d~~ 142 (214)
..+++++||||+||||.++++.|+++|++ |+++ +|+. +..+++.+++. +.++.++.+|++|.+
T Consensus 249 ~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~ 328 (525)
T 3qp9_A 249 QADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAE 328 (525)
T ss_dssp CTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHH
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHH
Confidence 35799999999999999999999999998 6666 7873 22333333222 457889999999999
Q ss_pred ccchhh-----hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhcc-C-----CCeEEEEcccccccc
Q 028043 143 DLDPAI-----FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS-S-----LKRIVLVSSVGVTKF 208 (214)
Q Consensus 143 ~v~~~~-----~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~-~-----~~~iV~vSS~~~~~~ 208 (214)
++++++ ++++|+||||||+..... .+.++....+++|+.|+.++.+++.+ . .++||++||.++...
T Consensus 329 ~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g 408 (525)
T 3qp9_A 329 AAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWG 408 (525)
T ss_dssp HHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTC
T ss_pred HHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCC
Confidence 988743 357999999999875321 22233456779999999999998732 2 679999999987643
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.72 E-value=2.8e-18 Score=158.16 Aligned_cols=124 Identities=15% Similarity=0.140 Sum_probs=97.9
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHC-CCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhc-cchhhhCCCcEEEe
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD-LDPAIFEGVTHVIC 157 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~-v~~~~~~~~d~li~ 157 (214)
+++|+|+||||+|+||++++++|+++ |++|++++|+++..+.+. ...+++++.+|++|.++ +++ ++.++|+|||
T Consensus 313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~---~~~~v~~v~~Dl~d~~~~~~~-~~~~~D~Vih 388 (660)
T 1z7e_A 313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL---NHPHFHFVEGDISIHSEWIEY-HVKKCDVVLP 388 (660)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGT---TCTTEEEEECCTTTCHHHHHH-HHHHCSEEEE
T ss_pred ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhc---cCCceEEEECCCCCcHHHHHH-hhcCCCEEEE
Confidence 46789999999999999999999998 899999999876554332 24578899999999765 554 4668999999
Q ss_pred ccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEEcccccccc
Q 028043 158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 158 ~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~vSS~~~~~~ 208 (214)
+||..... ....+....+++|+.|+.++++++++..+++|++||.++|+.
T Consensus 389 ~Aa~~~~~-~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~r~V~~SS~~vyg~ 438 (660)
T 1z7e_A 389 LVAIATPI-EYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGM 438 (660)
T ss_dssp CCCCCCTH-HHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBT
T ss_pred CceecCcc-ccccCHHHHHHhhhHHHHHHHHHHHHhCCEEEEEecHHHcCC
Confidence 99976421 111234567789999999999998542299999999998864
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.72 E-value=1.1e-18 Score=144.40 Aligned_cols=104 Identities=16% Similarity=0.188 Sum_probs=87.5
Q ss_pred EEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhC--CCcEEEeccCC
Q 028043 84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVICCTGT 161 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~--~~d~li~~Ag~ 161 (214)
+|+||||+|+||++++++|+++|++|++++|. ++|++|.++++++ +. ++|+|||+||.
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~-------------------~~D~~d~~~~~~~-~~~~~~d~vi~~a~~ 66 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK-------------------LLDITNISQVQQV-VQEIRPHIIIHCAAY 66 (287)
T ss_dssp EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT-------------------TSCTTCHHHHHHH-HHHHCCSEEEECCCC
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc-------------------ccCCCCHHHHHHH-HHhcCCCEEEECCcc
Confidence 89999999999999999999999999999992 2799999999875 44 79999999998
Q ss_pred CCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CCCeEEEEccccccccC
Q 028043 162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 162 ~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~~~iV~vSS~~~~~~~ 209 (214)
.... ..++++...+++|+.|+.++++++++ +. ++|++||.++|+..
T Consensus 67 ~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS~~vy~~~ 113 (287)
T 3sc6_A 67 TKVD-QAEKERDLAYVINAIGARNVAVASQLVGA-KLVYISTDYVFQGD 113 (287)
T ss_dssp CCHH-HHTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCCC
T ss_pred cChH-HHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchhhhcCCC
Confidence 7521 22245567789999999999999854 54 89999999998653
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=8.2e-18 Score=138.80 Aligned_cols=105 Identities=21% Similarity=0.365 Sum_probs=84.9
Q ss_pred EEEEEcCchHHHHHHHHHHHHC--CCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccCC
Q 028043 84 LVLVAGGSGGVGQLVVASLLSR--NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGT 161 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag~ 161 (214)
+|+||||+|+||++++++|+++ |++|++++|++++.+.+. ..+++++.+|++|++++++ ++.++|+|||+||.
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~D~~d~~~~~~-~~~~~d~vi~~a~~ 75 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA----AQGITVRQADYGDEAALTS-ALQGVEKLLLISSS 75 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHH----HTTCEEEECCTTCHHHHHH-HTTTCSEEEECC--
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhh----cCCCeEEEcCCCCHHHHHH-HHhCCCEEEEeCCC
Confidence 4899999999999999999998 999999999887655443 2357889999999999987 47889999999995
Q ss_pred CCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEcccccc
Q 028043 162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVT 206 (214)
Q Consensus 162 ~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~ 206 (214)
.. ..|+.++.+++++++ .+.++||++||.+++
T Consensus 76 ~~-------------~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~ 108 (286)
T 2zcu_A 76 EV-------------GQRAPQHRNVINAAKAAGVKFIAYTSLLHAD 108 (286)
T ss_dssp -------------------CHHHHHHHHHHHHTCCEEEEEEETTTT
T ss_pred Cc-------------hHHHHHHHHHHHHHHHcCCCEEEEECCCCCC
Confidence 31 147889999999885 578999999999886
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.72 E-value=1.4e-18 Score=144.20 Aligned_cols=107 Identities=22% Similarity=0.225 Sum_probs=88.1
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhC--CCcEEEec
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVICC 158 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~--~~d~li~~ 158 (214)
.-|+|+||||+|+||++++++|+++|++|++++|+ .+|++|.++++++ +. ++|+|||+
T Consensus 11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~-------------------~~Dl~d~~~~~~~-~~~~~~d~vih~ 70 (292)
T 1vl0_A 11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ-------------------DLDITNVLAVNKF-FNEKKPNVVINC 70 (292)
T ss_dssp -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT-------------------TCCTTCHHHHHHH-HHHHCCSEEEEC
T ss_pred ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc-------------------cCCCCCHHHHHHH-HHhcCCCEEEEC
Confidence 35899999999999999999999999999999986 2799999998874 44 79999999
Q ss_pred cCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CCCeEEEEccccccccC
Q 028043 159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 159 Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~~~iV~vSS~~~~~~~ 209 (214)
||..... ...++....+++|+.|+.++++++++ +. +||++||.++|+..
T Consensus 71 A~~~~~~-~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS~~v~~~~ 120 (292)
T 1vl0_A 71 AAHTAVD-KCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGE 120 (292)
T ss_dssp CCCCCHH-HHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSC
T ss_pred CccCCHH-HHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEechHHeECCC
Confidence 9975421 11134456789999999999999854 55 99999999988753
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=9.2e-18 Score=149.79 Aligned_cols=127 Identities=22% Similarity=0.224 Sum_probs=97.7
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCe-EEEEEcChh---HHHHHhcccC--CCCEEEEEecCCChhccchhh-----h
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRDPE---KATTLFGKQD--EETLQVCKGDTRNPKDLDPAI-----F 149 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~-V~~~~r~~~---~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~-----~ 149 (214)
.+++++||||+||||++++++|+++|++ |++++|+.. ..+++.+++. +.++.++.+|++|++++++.+ +
T Consensus 225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~~ 304 (486)
T 2fr1_A 225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD 304 (486)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHhc
Confidence 5789999999999999999999999995 999999874 2333322221 456889999999999988643 2
Q ss_pred CCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhcc-CCCeEEEEccccccc
Q 028043 150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTK 207 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~-~~~~iV~vSS~~~~~ 207 (214)
+++|+||||||+..... ...+.....+++|+.|+.++.++++. +.++||++||.+++.
T Consensus 305 g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~ 366 (486)
T 2fr1_A 305 VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAF 366 (486)
T ss_dssp SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHT
T ss_pred CCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcC
Confidence 35799999999865321 22233455678899999999998854 678999999987643
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=1.1e-17 Score=149.58 Aligned_cols=127 Identities=20% Similarity=0.222 Sum_probs=97.7
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChh---HHHHHhcccC--CCCEEEEEecCCChhccchhhh-----
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPE---KATTLFGKQD--EETLQVCKGDTRNPKDLDPAIF----- 149 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~---~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~~----- 149 (214)
++++++||||+||||+++++.|+++|+ +|++++|+.. ..+++.+++. +.++.++.+|++|++++++.+-
T Consensus 238 ~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~ 317 (496)
T 3mje_A 238 VHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPED 317 (496)
T ss_dssp CCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTT
T ss_pred CCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence 358999999999999999999999999 7888899742 2333333222 4578899999999999887431
Q ss_pred CCCcEEEeccCCC-CCCC---CCCCCCCchhHHHHHHHHHHHHHhcc-CCCeEEEEccccccc
Q 028043 150 EGVTHVICCTGTT-AFPS---RRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTK 207 (214)
Q Consensus 150 ~~~d~li~~Ag~~-~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~-~~~~iV~vSS~~~~~ 207 (214)
+++|+||||||+. .... ...+.....+++|+.|+.++.+++.+ ..++||++||.++..
T Consensus 318 g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~ 380 (496)
T 3mje_A 318 APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVW 380 (496)
T ss_dssp SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHT
T ss_pred CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcC
Confidence 3699999999987 3211 22233456779999999999998854 678999999987754
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=1.3e-18 Score=145.82 Aligned_cols=113 Identities=20% Similarity=0.276 Sum_probs=92.4
Q ss_pred EEEEEcCchHHHHHHHHHHHHC--CCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhC--CCcEEEecc
Q 028043 84 LVLVAGGSGGVGQLVVASLLSR--NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVICCT 159 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~--~~d~li~~A 159 (214)
+|+||||+|+||++++++|+++ |++|++++|+....+ +++++.+|++|+++++++ +. ++|+|||+|
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~---------~~~~~~~D~~d~~~~~~~-~~~~~~d~vih~a 70 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG---------GIKFITLDVSNRDEIDRA-VEKYSIDAIFHLA 70 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT---------TCCEEECCTTCHHHHHHH-HHHTTCCEEEECC
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc---------CceEEEecCCCHHHHHHH-HhhcCCcEEEECC
Confidence 4899999999999999999998 899999998754321 356789999999999874 44 799999999
Q ss_pred CCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEcccccccc
Q 028043 160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 160 g~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~ 208 (214)
|..... ..++....+++|+.|+.+++++++ .+.++||++||.++|+.
T Consensus 71 ~~~~~~--~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~ 118 (317)
T 3ajr_A 71 GILSAK--GEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGP 118 (317)
T ss_dssp CCCHHH--HHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCT
T ss_pred cccCCc--cccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCC
Confidence 975421 112445678999999999999985 57789999999999875
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=2.8e-18 Score=142.66 Aligned_cols=109 Identities=18% Similarity=0.101 Sum_probs=88.6
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhC--CCcEEEeccC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVICCTG 160 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~--~~d~li~~Ag 160 (214)
|+|+||||+|+||++++++|+ +|++|++++|++. .+.+|++|.++++++ +. ++|+|||+||
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~---------------~~~~D~~d~~~~~~~-~~~~~~d~vih~a~ 63 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK---------------EFCGDFSNPKGVAET-VRKLRPDVIVNAAA 63 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS---------------SSCCCTTCHHHHHHH-HHHHCCSEEEECCC
T ss_pred CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc---------------cccccCCCHHHHHHH-HHhcCCCEEEECcc
Confidence 479999999999999999999 8999999999761 246899999998874 44 4999999999
Q ss_pred CCCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEEccccccccC
Q 028043 161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 161 ~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~vSS~~~~~~~ 209 (214)
..... ..+.+....+++|+.|+.+++++++....++|++||.++|+..
T Consensus 64 ~~~~~-~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~vy~~~ 111 (299)
T 1n2s_A 64 HTAVD-KAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGT 111 (299)
T ss_dssp CCCHH-HHTTCHHHHHHHHTHHHHHHHHHHTTTTCEEEEEEEGGGSCCC
T ss_pred cCCHh-hhhcCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEecccEEeCC
Confidence 76421 1223556678999999999999996533489999999998753
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.71 E-value=3.6e-18 Score=140.04 Aligned_cols=112 Identities=20% Similarity=0.092 Sum_probs=89.0
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhC--CCcEEEeccC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVTHVICCTG 160 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~--~~d~li~~Ag 160 (214)
|+|+||||+|+||++++++|+ +|++|++++|+++. + .+ +.+|++|+++++++ +. ++|+||||||
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~-~--------~~---~~~Dl~~~~~~~~~-~~~~~~d~vi~~a~ 66 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEI-Q--------GG---YKLDLTDFPRLEDF-IIKKRPDVIINAAA 66 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCC-T--------TC---EECCTTSHHHHHHH-HHHHCCSEEEECCC
T ss_pred CEEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcC-C--------CC---ceeccCCHHHHHHH-HHhcCCCEEEECCc
Confidence 469999999999999999999 49999999998742 1 12 78999999998874 44 5999999999
Q ss_pred CCCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEEccccccccC
Q 028043 161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 161 ~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~vSS~~~~~~~ 209 (214)
..... ...++....+++|+.|+.++++++++...+||++||.++|+..
T Consensus 67 ~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~iv~~SS~~~~~~~ 114 (273)
T 2ggs_A 67 MTDVD-KCEIEKEKAYKINAEAVRHIVRAGKVIDSYIVHISTDYVFDGE 114 (273)
T ss_dssp CCCHH-HHHHCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEGGGSCSS
T ss_pred ccChh-hhhhCHHHHHHHhHHHHHHHHHHHHHhCCeEEEEecceeEcCC
Confidence 76421 1113445678999999999999985433499999999988654
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.71 E-value=2.4e-17 Score=147.41 Aligned_cols=119 Identities=19% Similarity=0.300 Sum_probs=93.9
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHH---HHHhc-----------ccCCCCEEEEEecCCChhccch
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA---TTLFG-----------KQDEETLQVCKGDTRNPKDLDP 146 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~---~~~~~-----------~~~~~~~~~v~~Di~d~~~v~~ 146 (214)
.+|+|+||||+|+||++++++|.+.|++|++++|++... +.+.+ .....+++++.+|++|++.+.
T Consensus 149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~- 227 (508)
T 4f6l_B 149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV- 227 (508)
T ss_dssp CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-
T ss_pred CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-
Confidence 458999999999999999999999999999999987632 11111 011457999999999988888
Q ss_pred hhhCCCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEEccccc
Q 028043 147 AIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGV 205 (214)
Q Consensus 147 ~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~vSS~~~ 205 (214)
...++|+||||||.... ..+....+++|+.|+.+++++++...+++|++||.++
T Consensus 228 -~~~~~D~Vih~Aa~~~~----~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~v~iSS~~v 281 (508)
T 4f6l_B 228 -LPENMDTIIHAGARTDH----FGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV 281 (508)
T ss_dssp -CSSCCSEEEECCCC------------CCHHHHHHHHHHHHHHHHTTTCEEEEEEESCT
T ss_pred -CccCCCEEEECCceecC----CCCHHHHhhhHHHHHHHHHHHHHhCCCcEEEeCChhh
Confidence 46789999999997642 2344567899999999999999767889999999988
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.71 E-value=7.8e-18 Score=153.84 Aligned_cols=128 Identities=14% Similarity=0.123 Sum_probs=93.3
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh-hHH-HHHhcccCCCCEEEEEecC-CChhccchhh---hCC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP-EKA-TTLFGKQDEETLQVCKGDT-RNPKDLDPAI---FEG 151 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~-~~~-~~~~~~~~~~~~~~v~~Di-~d~~~v~~~~---~~~ 151 (214)
..+++|+++||||++|||++++++|+++|++|++.+|+. +.. +++.+ . +..+..+.+|+ ++.+.+-+.+ +++
T Consensus 318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~-~-g~~~~~~~~Dv~~~~~~~~~~~~~~~G~ 395 (604)
T 2et6_A 318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKA-A-GGEAWPDQHDVAKDSEAIIKNVIDKYGT 395 (604)
T ss_dssp CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHH-T-TCEEEEECCCHHHHHHHHHHHHHHHHSC
T ss_pred cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHh-c-CCeEEEEEcChHHHHHHHHHHHHHhcCC
Confidence 357899999999999999999999999999999998642 222 22221 1 34566677888 5544332212 689
Q ss_pred CcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEccccccc
Q 028043 152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTK 207 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~ 207 (214)
+|+||||||+..... .+.++++..+++|+.|++++++++ +++.++||++||.++..
T Consensus 396 iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~ 459 (604)
T 2et6_A 396 IDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIY 459 (604)
T ss_dssp CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHS
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcc
Confidence 999999999865321 233345677899999999999876 23457999999987754
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.71 E-value=3.7e-17 Score=146.67 Aligned_cols=127 Identities=20% Similarity=0.136 Sum_probs=97.8
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChh---HHHHHhcccC--CCCEEEEEecCCChhccchhhh-CCCc
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPE---KATTLFGKQD--EETLQVCKGDTRNPKDLDPAIF-EGVT 153 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~---~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~~-~~~d 153 (214)
.+++++||||+||||++++++|+++|+ +|++++|+.. ..+++.+++. +.++.++.+|++|.+++++.+- +++|
T Consensus 258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~ld 337 (511)
T 2z5l_A 258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYPPN 337 (511)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCCc
Confidence 578999999999999999999999999 5999999863 2333333222 4568889999999999987432 4699
Q ss_pred EEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhcc--CCCeEEEEccccccc
Q 028043 154 HVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS--SLKRIVLVSSVGVTK 207 (214)
Q Consensus 154 ~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~--~~~~iV~vSS~~~~~ 207 (214)
+||||||+..... ...+.....+++|+.|+.++.+++.. +.++||++||.++..
T Consensus 338 ~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~ 396 (511)
T 2z5l_A 338 AVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTW 396 (511)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTT
T ss_pred EEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcC
Confidence 9999999875321 12223455678999999999998854 568999999987643
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=99.70 E-value=5.8e-18 Score=143.81 Aligned_cols=127 Identities=12% Similarity=0.087 Sum_probs=92.5
Q ss_pred CCEEEEEcCch--HHHHHHHHHHHHCCCeEEEEEcCh---------hHHHHHhcccC-----CCCEEEEEecCCCh--h-
Q 028043 82 SKLVLVAGGSG--GVGQLVVASLLSRNIKSRLLLRDP---------EKATTLFGKQD-----EETLQVCKGDTRNP--K- 142 (214)
Q Consensus 82 ~k~vlITGasg--gIG~~la~~L~~~G~~V~~~~r~~---------~~~~~~~~~~~-----~~~~~~v~~Di~d~--~- 142 (214)
+|+++||||++ |||+++|++|+++|++|++++|++ ++++....... ...+.++.+|+++. +
T Consensus 2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~ 81 (329)
T 3lt0_A 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND 81 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGG
T ss_pred CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhh
Confidence 68999999875 999999999999999999877665 22222221111 12367889999987 6
Q ss_pred -----------------ccchhh------hCCCcEEEeccCCCCC---C--CCCCCCCCchhHHHHHHHHHHHHHhccC-
Q 028043 143 -----------------DLDPAI------FEGVTHVICCTGTTAF---P--SRRWDGDNTPEKVDWEGVRNLVSALPSS- 193 (214)
Q Consensus 143 -----------------~v~~~~------~~~~d~li~~Ag~~~~---~--~~~~~~~~~~~~vNv~g~~~l~~a~~~~- 193 (214)
++++++ ++++|+||||||+... + ....+.+...+++|+.|++++++++.+.
T Consensus 82 ~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m 161 (329)
T 3lt0_A 82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM 161 (329)
T ss_dssp CCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred hhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 666532 5789999999997421 1 1223345667899999999999987432
Q ss_pred --CCeEEEEcccccccc
Q 028043 194 --LKRIVLVSSVGVTKF 208 (214)
Q Consensus 194 --~~~iV~vSS~~~~~~ 208 (214)
.++||++||.++..+
T Consensus 162 ~~~g~Iv~isS~~~~~~ 178 (329)
T 3lt0_A 162 KPQSSIISLTYHASQKV 178 (329)
T ss_dssp EEEEEEEEEECGGGTSC
T ss_pred hhCCeEEEEeCccccCC
Confidence 268999999987654
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=2.2e-17 Score=139.33 Aligned_cols=130 Identities=14% Similarity=0.098 Sum_probs=89.4
Q ss_pred CCCCCCEEEEEcC--chHHHHHHHHHHHHCCCeEEEEEcChh-----------HHHHHhcccCCCC----EEEEEecC--
Q 028043 78 PASSSKLVLVAGG--SGGVGQLVVASLLSRNIKSRLLLRDPE-----------KATTLFGKQDEET----LQVCKGDT-- 138 (214)
Q Consensus 78 ~~~~~k~vlITGa--sggIG~~la~~L~~~G~~V~~~~r~~~-----------~~~~~~~~~~~~~----~~~v~~Di-- 138 (214)
+++++|+++|||| +||||++++++|+++|++|++++|++. +++++. ++.... ..++.+|+
T Consensus 5 ~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~ 83 (315)
T 2o2s_A 5 IDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDR-KLPDGSLIEFAGVYPLDAAF 83 (315)
T ss_dssp CCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHH-BCTTSCBCCCSCEEECCTTC
T ss_pred ccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhh-hhhccccccccccccccccc
Confidence 4467899999999 899999999999999999999998641 122221 121111 23444443
Q ss_pred ----------CC--------hhccchhh------hCCCcEEEeccCCCC--C-C--CCCCCCCCchhHHHHHHHHHHHHH
Q 028043 139 ----------RN--------PKDLDPAI------FEGVTHVICCTGTTA--F-P--SRRWDGDNTPEKVDWEGVRNLVSA 189 (214)
Q Consensus 139 ----------~d--------~~~v~~~~------~~~~d~li~~Ag~~~--~-~--~~~~~~~~~~~~vNv~g~~~l~~a 189 (214)
+| ++++++++ ++++|+||||||... . + ....+++...+++|+.|+++++++
T Consensus 84 ~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~ 163 (315)
T 2o2s_A 84 DKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQH 163 (315)
T ss_dssp SSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred cccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHH
Confidence 32 44555422 568999999999753 1 1 122233456789999999999998
Q ss_pred hccC---CCeEEEEcccccccc
Q 028043 190 LPSS---LKRIVLVSSVGVTKF 208 (214)
Q Consensus 190 ~~~~---~~~iV~vSS~~~~~~ 208 (214)
+.+. .++||++||.+++.+
T Consensus 164 ~~~~m~~~g~Iv~isS~~~~~~ 185 (315)
T 2o2s_A 164 FGPIMNEGGSAVTLSYLAAERV 185 (315)
T ss_dssp HSTTEEEEEEEEEEEEGGGTSC
T ss_pred HHHHHhcCCEEEEEeccccccc
Confidence 8542 269999999987653
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.69 E-value=2.3e-17 Score=137.49 Aligned_cols=114 Identities=12% Similarity=0.112 Sum_probs=90.5
Q ss_pred EEEEEcCchHHHHHHHHHHHHCC-CeEEEEEcChhHH--HHHhcccCCCCEEEEEecCCChhccchhhhC-----CCcEE
Q 028043 84 LVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKA--TTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-----GVTHV 155 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~G-~~V~~~~r~~~~~--~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~-----~~d~l 155 (214)
+|+||||+|+||++++++|+++| ++|++++|++... ..+. . +. +.+|++|.+.++++ +. ++|+|
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~----~--~~-~~~d~~~~~~~~~~-~~~~~~~~~d~v 72 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLV----D--LN-IADYMDKEDFLIQI-MAGEEFGDVEAI 72 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHH----T--SC-CSEEEEHHHHHHHH-HTTCCCSSCCEE
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhhhcC----c--ce-eccccccHHHHHHH-HhccccCCCcEE
Confidence 48999999999999999999999 9999999976542 2221 1 22 67899998888864 44 59999
Q ss_pred EeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccccccccC
Q 028043 156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 156 i~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~~ 209 (214)
||+||.... ...+....+++|+.|+.+++++++ .+. ++|++||.++|+..
T Consensus 73 i~~a~~~~~---~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~ 123 (310)
T 1eq2_A 73 FHEGACSST---TEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGR 123 (310)
T ss_dssp EECCSCCCT---TCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGTTC
T ss_pred EECcccccC---cccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeHHHhCCC
Confidence 999997652 223456678999999999999985 467 99999999988753
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=2.9e-17 Score=137.24 Aligned_cols=130 Identities=14% Similarity=0.078 Sum_probs=89.2
Q ss_pred CCCCCCEEEEEcCc--hHHHHHHHHHHHHCCCeEEEEEcChh-----------HHHHHhcccCCCC----EEEEEec---
Q 028043 78 PASSSKLVLVAGGS--GGVGQLVVASLLSRNIKSRLLLRDPE-----------KATTLFGKQDEET----LQVCKGD--- 137 (214)
Q Consensus 78 ~~~~~k~vlITGas--ggIG~~la~~L~~~G~~V~~~~r~~~-----------~~~~~~~~~~~~~----~~~v~~D--- 137 (214)
+++++|+++||||+ ||||++++++|+++|++|++++|++. +++++ +++.... ...+.+|
T Consensus 4 ~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 82 (297)
T 1d7o_A 4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQS-RVLPDGSLMEIKKVYPLDAVF 82 (297)
T ss_dssp CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGG-GBCTTSSBCCEEEEEEECTTC
T ss_pred cccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhh-hhhccccccccccccccceec
Confidence 45678999999999 99999999999999999999987642 11222 1121111 2344444
Q ss_pred -----CC----C--------hhccchhh------hCCCcEEEeccCCCCC---C--CCCCCCCCchhHHHHHHHHHHHHH
Q 028043 138 -----TR----N--------PKDLDPAI------FEGVTHVICCTGTTAF---P--SRRWDGDNTPEKVDWEGVRNLVSA 189 (214)
Q Consensus 138 -----i~----d--------~~~v~~~~------~~~~d~li~~Ag~~~~---~--~~~~~~~~~~~~vNv~g~~~l~~a 189 (214)
++ | ++++++.+ ++++|+||||||+... + ....+++++.+++|+.|+++++++
T Consensus 83 ~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ 162 (297)
T 1d7o_A 83 DNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSH 162 (297)
T ss_dssp CSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred cchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHH
Confidence 22 1 44555422 5689999999996431 1 122334466789999999999998
Q ss_pred hccC---CCeEEEEcccccccc
Q 028043 190 LPSS---LKRIVLVSSVGVTKF 208 (214)
Q Consensus 190 ~~~~---~~~iV~vSS~~~~~~ 208 (214)
+.+. .++||++||.+++.+
T Consensus 163 ~~~~m~~~g~iv~isS~~~~~~ 184 (297)
T 1d7o_A 163 FLPIMNPGGASISLTYIASERI 184 (297)
T ss_dssp HGGGEEEEEEEEEEECGGGTSC
T ss_pred HHHHhccCceEEEEeccccccC
Confidence 8432 368999999887653
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.68 E-value=7.9e-17 Score=134.19 Aligned_cols=112 Identities=24% Similarity=0.310 Sum_probs=91.4
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCC-CeEEEEEcChhHHH--HHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKAT--TLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G-~~V~~~~r~~~~~~--~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
+|+|+||||+|+||++++++|+++| ++|++++|++++.. .+. ..+++++.+|++|+++++++ +.++|+|||+
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~----~~~~~~~~~D~~d~~~l~~~-~~~~d~vi~~ 79 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELR----LQGAEVVQGDQDDQVIMELA-LNGAYATFIV 79 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHH----HTTCEEEECCTTCHHHHHHH-HTTCSEEEEC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHH----HCCCEEEEecCCCHHHHHHH-HhcCCEEEEe
Confidence 5799999999999999999999998 99999999876542 222 24688999999999999874 7889999999
Q ss_pred cCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccccccc
Q 028043 159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 159 Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~ 207 (214)
||..... ..+.|+.++.+++++++ .+.++||++|+.++++
T Consensus 80 a~~~~~~---------~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~ 120 (299)
T 2wm3_A 80 TNYWESC---------SQEQEVKQGKLLADLARRLGLHYVVYSGLENIKK 120 (299)
T ss_dssp CCHHHHT---------CHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHH
T ss_pred CCCCccc---------cchHHHHHHHHHHHHHHHcCCCEEEEEcCccccc
Confidence 9854210 14678899999999884 5889999988876654
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.68 E-value=9.8e-17 Score=143.94 Aligned_cols=111 Identities=18% Similarity=0.189 Sum_probs=85.9
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccCC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGT 161 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag~ 161 (214)
+|+||||||+|+||++++++|+++|++|++++|++.+.+ .+.+|+.+. +.+ .+.++|+|||+||.
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~------------~v~~d~~~~--~~~-~l~~~D~Vih~A~~ 211 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPG------------KRFWDPLNP--ASD-LLDGADVLVHLAGE 211 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTT------------CEECCTTSC--CTT-TTTTCSEEEECCCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCcc------------ceeecccch--hHH-hcCCCCEEEECCCC
Confidence 689999999999999999999999999999999876421 256788743 343 46789999999998
Q ss_pred CCCCCCCCCCCCchhHHHHHHHHHHHHH-hc-cCCCeEEEEccccccc
Q 028043 162 TAFPSRRWDGDNTPEKVDWEGVRNLVSA-LP-SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 162 ~~~~~~~~~~~~~~~~vNv~g~~~l~~a-~~-~~~~~iV~vSS~~~~~ 207 (214)
........+.....+++|+.|+.+++++ ++ .+.++||++||.++|+
T Consensus 212 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg 259 (516)
T 3oh8_A 212 PIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYG 259 (516)
T ss_dssp -----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGC
T ss_pred ccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEec
Confidence 6432111123345678999999999998 43 4778999999999987
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=99.67 E-value=3.7e-16 Score=129.08 Aligned_cols=104 Identities=14% Similarity=0.186 Sum_probs=83.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
++|+|+|||| |+||++++++|+++|++|++++|++++.+.+. ..+++++.+|++|.+ +.++|+|||+||
T Consensus 4 m~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~D~~d~~------~~~~d~vi~~a~ 72 (286)
T 3ius_A 4 MTGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIR----ASGAEPLLWPGEEPS------LDGVTHLLISTA 72 (286)
T ss_dssp -CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHH----HTTEEEEESSSSCCC------CTTCCEEEECCC
T ss_pred CcCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHh----hCCCeEEEecccccc------cCCCCEEEECCC
Confidence 3589999998 99999999999999999999999998776654 356899999999844 468999999999
Q ss_pred CCCCCCCCCCCCCchhHHHHHHHHHHHHHhc---cCCCeEEEEccccccccC
Q 028043 161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 161 ~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~---~~~~~iV~vSS~~~~~~~ 209 (214)
..... . ..+.+++++++ .+.+++|++||.++|+..
T Consensus 73 ~~~~~-------~-------~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~ 110 (286)
T 3ius_A 73 PDSGG-------D-------PVLAALGDQIAARAAQFRWVGYLSTTAVYGDH 110 (286)
T ss_dssp CBTTB-------C-------HHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCC
T ss_pred ccccc-------c-------HHHHHHHHHHHhhcCCceEEEEeecceecCCC
Confidence 75411 1 12467777773 467899999999998754
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=99.66 E-value=7.7e-17 Score=136.08 Aligned_cols=131 Identities=12% Similarity=0.077 Sum_probs=83.9
Q ss_pred CCCCCCEEEEEcC--chHHHHHHHHHHHHCCCeEEEEEcCh-----------hHHHH-----------HhcccCCC----
Q 028043 78 PASSSKLVLVAGG--SGGVGQLVVASLLSRNIKSRLLLRDP-----------EKATT-----------LFGKQDEE---- 129 (214)
Q Consensus 78 ~~~~~k~vlITGa--sggIG~~la~~L~~~G~~V~~~~r~~-----------~~~~~-----------~~~~~~~~---- 129 (214)
+.+++|+++|||| ++|||++++++|+++|++|++++|++ +++++ +.+++...
T Consensus 5 ~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (319)
T 2ptg_A 5 VDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDL 84 (319)
T ss_dssp CCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------
T ss_pred cccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccc
Confidence 4467899999999 89999999999999999999998753 11211 11111111
Q ss_pred -CEEEEEecC------------CC--------hhccchhh------hCCCcEEEeccCCCC--C-C--CCCCCCCCchhH
Q 028043 130 -TLQVCKGDT------------RN--------PKDLDPAI------FEGVTHVICCTGTTA--F-P--SRRWDGDNTPEK 177 (214)
Q Consensus 130 -~~~~v~~Di------------~d--------~~~v~~~~------~~~~d~li~~Ag~~~--~-~--~~~~~~~~~~~~ 177 (214)
...++.+|+ +| ++++++++ ++++|+||||||... . + ....+++...++
T Consensus 85 ~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~ 164 (319)
T 2ptg_A 85 VFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVS 164 (319)
T ss_dssp CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHH
T ss_pred cccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHh
Confidence 024444442 22 33555422 568999999999752 1 1 122233456789
Q ss_pred HHHHHHHHHHHHhccC---CCeEEEEcccccccc
Q 028043 178 VDWEGVRNLVSALPSS---LKRIVLVSSVGVTKF 208 (214)
Q Consensus 178 vNv~g~~~l~~a~~~~---~~~iV~vSS~~~~~~ 208 (214)
+|+.|++++++++.+. .++||++||.+++.+
T Consensus 165 vN~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~ 198 (319)
T 2ptg_A 165 SSSYSFVSLLQHFLPLMKEGGSALALSYIASEKV 198 (319)
T ss_dssp HHTHHHHHHHHHHGGGEEEEEEEEEEEECC----
T ss_pred HhhHHHHHHHHHHHHHHhcCceEEEEeccccccc
Confidence 9999999999988432 279999999987643
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=7.9e-16 Score=131.80 Aligned_cols=107 Identities=18% Similarity=0.219 Sum_probs=87.6
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHH--HHHhcccCCCCEEEEEec-CCChhccchhhhCCCcEEEe
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA--TTLFGKQDEETLQVCKGD-TRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~--~~~~~~~~~~~~~~v~~D-i~d~~~v~~~~~~~~d~li~ 157 (214)
.+|+|+||||+|+||++++++|+++|++|++++|++++. +.+.. ..+++++.+| ++|++++++ ++.++|+|||
T Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~---~~~v~~v~~D~l~d~~~l~~-~~~~~d~Vi~ 79 (352)
T 1xgk_A 4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQA---IPNVTLFQGPLLNNVPLMDT-LFEGAHLAFI 79 (352)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHT---STTEEEEESCCTTCHHHHHH-HHTTCSEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhh---cCCcEEEECCccCCHHHHHH-HHhcCCEEEE
Confidence 367899999999999999999999999999999987654 33321 2368899999 999999987 4788999999
Q ss_pred ccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cC-CCeEEEEcccc
Q 028043 158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SS-LKRIVLVSSVG 204 (214)
Q Consensus 158 ~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~-~~~iV~vSS~~ 204 (214)
|++... .+.|..+ .+++++++ .+ .++||++||.+
T Consensus 80 ~a~~~~------------~~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~ 115 (352)
T 1xgk_A 80 NTTSQA------------GDEIAIG-KDLADAAKRAGTIQHYIYSSMPD 115 (352)
T ss_dssp CCCSTT------------SCHHHHH-HHHHHHHHHHSCCSEEEEEECCC
T ss_pred cCCCCC------------cHHHHHH-HHHHHHHHHcCCccEEEEeCCcc
Confidence 997431 1347777 89999885 46 89999999986
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=1.8e-16 Score=157.23 Aligned_cols=131 Identities=18% Similarity=0.124 Sum_probs=99.6
Q ss_pred CCCCCCEEEEEcCchH-HHHHHHHHHHHCCCeEEEE-EcChhHHHHHhc----ccC--CCCEEEEEecCCChhccchhh-
Q 028043 78 PASSSKLVLVAGGSGG-VGQLVVASLLSRNIKSRLL-LRDPEKATTLFG----KQD--EETLQVCKGDTRNPKDLDPAI- 148 (214)
Q Consensus 78 ~~~~~k~vlITGasgg-IG~~la~~L~~~G~~V~~~-~r~~~~~~~~~~----~~~--~~~~~~v~~Di~d~~~v~~~~- 148 (214)
+.+++|+++||||++| ||++++++|+++|++|+++ .|+.+++++..+ .+. +.++.++.+|++|.+++++++
T Consensus 671 m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~ 750 (1887)
T 2uv8_A 671 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIE 750 (1887)
T ss_dssp BCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHH
Confidence 4578899999999998 9999999999999999998 577666544332 222 346888999999999988643
Q ss_pred ----------hC-CCcEEEeccCCCCCC-C---CC--CCCCCchhHHHHHHHHHHHHHh--ccC-----CCeEEEEcccc
Q 028043 149 ----------FE-GVTHVICCTGTTAFP-S---RR--WDGDNTPEKVDWEGVRNLVSAL--PSS-----LKRIVLVSSVG 204 (214)
Q Consensus 149 ----------~~-~~d~li~~Ag~~~~~-~---~~--~~~~~~~~~vNv~g~~~l~~a~--~~~-----~~~iV~vSS~~ 204 (214)
++ ++|+||||||+.... . .. .+.....+++|+.|+.++++++ .+. .++||++||.+
T Consensus 751 ~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~a 830 (1887)
T 2uv8_A 751 FIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNH 830 (1887)
T ss_dssp HHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCT
T ss_pred HHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChH
Confidence 23 699999999986532 1 11 2234667899999999999876 222 25899999988
Q ss_pred cccc
Q 028043 205 VTKF 208 (214)
Q Consensus 205 ~~~~ 208 (214)
+..+
T Consensus 831 g~~g 834 (1887)
T 2uv8_A 831 GTFG 834 (1887)
T ss_dssp TCSS
T ss_pred hccC
Confidence 7654
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=1.1e-16 Score=138.48 Aligned_cols=126 Identities=15% Similarity=0.068 Sum_probs=90.6
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHH-CCCeEEEEEcChhHH---------------HHHhcccCCCCEEEEEecCCChhcc
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLS-RNIKSRLLLRDPEKA---------------TTLFGKQDEETLQVCKGDTRNPKDL 144 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~-~G~~V~~~~r~~~~~---------------~~~~~~~~~~~~~~v~~Di~d~~~v 144 (214)
.+|+++||||++|||+++++.|++ .|++|++++|+.+.. ++..+. .+..+..+.+|++|++++
T Consensus 46 ~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~-~G~~a~~i~~Dvtd~~~v 124 (405)
T 3zu3_A 46 GPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQ-KGLYAKSINGDAFSDEIK 124 (405)
T ss_dssp CCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHH-TTCCEEEEESCTTSHHHH
T ss_pred CCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHh-cCCceEEEECCCCCHHHH
Confidence 579999999999999999999999 999999998865431 111111 145678899999999988
Q ss_pred chhh------hCCCcEEEeccCCCC--------------CCC-----------------------CCCCCCCchhHHHHH
Q 028043 145 DPAI------FEGVTHVICCTGTTA--------------FPS-----------------------RRWDGDNTPEKVDWE 181 (214)
Q Consensus 145 ~~~~------~~~~d~li~~Ag~~~--------------~~~-----------------------~~~~~~~~~~~vNv~ 181 (214)
++++ ++++|+||||||... .+. ...++++..+++|..
T Consensus 125 ~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~ 204 (405)
T 3zu3_A 125 QLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGG 204 (405)
T ss_dssp HHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhch
Confidence 8643 679999999999741 010 111223455677877
Q ss_pred HHH-HHHHHh-cc----CCCeEEEEccccccc
Q 028043 182 GVR-NLVSAL-PS----SLKRIVLVSSVGVTK 207 (214)
Q Consensus 182 g~~-~l~~a~-~~----~~~~iV~vSS~~~~~ 207 (214)
+.+ .+++++ .+ ..++||++||+++..
T Consensus 205 ~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~ 236 (405)
T 3zu3_A 205 EDWQMWIDALLDAGVLAEGAQTTAFTYLGEKI 236 (405)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEEEEEECCCCGG
T ss_pred hHHHHHHHHHHHHhhhhCCcEEEEEeCchhhC
Confidence 776 566654 22 236899999998754
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.64 E-value=7.4e-17 Score=156.28 Aligned_cols=131 Identities=17% Similarity=0.125 Sum_probs=98.0
Q ss_pred CCCCCCEEEEEcCchH-HHHHHHHHHHHCCCeEEEE-EcChhHHHHHhccc----C--CCCEEEEEecCCChhccchhh-
Q 028043 78 PASSSKLVLVAGGSGG-VGQLVVASLLSRNIKSRLL-LRDPEKATTLFGKQ----D--EETLQVCKGDTRNPKDLDPAI- 148 (214)
Q Consensus 78 ~~~~~k~vlITGasgg-IG~~la~~L~~~G~~V~~~-~r~~~~~~~~~~~~----~--~~~~~~v~~Di~d~~~v~~~~- 148 (214)
+.+++|+++||||++| ||+++|++|+++|++|+++ .|+.+++++..+++ . +.++.++.+|++|.+++++++
T Consensus 472 msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe 551 (1688)
T 2pff_A 472 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIE 551 (1688)
T ss_dssp CCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHH
T ss_pred cccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHH
Confidence 4578899999999998 9999999999999999998 56655544332222 2 346788999999999988743
Q ss_pred ----------hC-CCcEEEeccCCCCCC-C-CC----CCCCCchhHHHHHHHHHHHHHh--ccC-----CCeEEEEcccc
Q 028043 149 ----------FE-GVTHVICCTGTTAFP-S-RR----WDGDNTPEKVDWEGVRNLVSAL--PSS-----LKRIVLVSSVG 204 (214)
Q Consensus 149 ----------~~-~~d~li~~Ag~~~~~-~-~~----~~~~~~~~~vNv~g~~~l~~a~--~~~-----~~~iV~vSS~~ 204 (214)
++ ++|+||||||+.... . .+ .+.....+++|+.|+.++++++ .+. .++||++||.+
T Consensus 552 ~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiA 631 (1688)
T 2pff_A 552 FIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNH 631 (1688)
T ss_dssp HHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCT
T ss_pred HHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChH
Confidence 23 699999999986432 1 11 1233567799999999998876 222 25899999987
Q ss_pred cccc
Q 028043 205 VTKF 208 (214)
Q Consensus 205 ~~~~ 208 (214)
+..+
T Consensus 632 G~~G 635 (1688)
T 2pff_A 632 GTFG 635 (1688)
T ss_dssp TTSS
T ss_pred hccC
Confidence 7644
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=7.4e-16 Score=152.72 Aligned_cols=136 Identities=15% Similarity=0.124 Sum_probs=99.8
Q ss_pred CCCCCCEEEEEcCchH-HHHHHHHHHHHCCCeEEEEE-cChhHHHH----HhcccC--CCCEEEEEecCCChhccchhh-
Q 028043 78 PASSSKLVLVAGGSGG-VGQLVVASLLSRNIKSRLLL-RDPEKATT----LFGKQD--EETLQVCKGDTRNPKDLDPAI- 148 (214)
Q Consensus 78 ~~~~~k~vlITGasgg-IG~~la~~L~~~G~~V~~~~-r~~~~~~~----~~~~~~--~~~~~~v~~Di~d~~~v~~~~- 148 (214)
+.+++|++|||||+|| ||+++++.|+++|++|++++ |+.+.+++ +.+++. +.++.++.+|++|.+++++.+
T Consensus 648 m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~ 727 (1878)
T 2uv9_A 648 LTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVN 727 (1878)
T ss_dssp BCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHH
Confidence 4567899999999999 99999999999999999985 65555433 222332 346888999999999988743
Q ss_pred --------hC-CCcEEEeccCCCCCC-C-CC----CCCCCchhHHHHHHHHHHHHHh---cc----CCCeEEEEcccccc
Q 028043 149 --------FE-GVTHVICCTGTTAFP-S-RR----WDGDNTPEKVDWEGVRNLVSAL---PS----SLKRIVLVSSVGVT 206 (214)
Q Consensus 149 --------~~-~~d~li~~Ag~~~~~-~-~~----~~~~~~~~~vNv~g~~~l~~a~---~~----~~~~iV~vSS~~~~ 206 (214)
++ ++|+||||||+.... . .+ .+.....+++|+.|+.++++++ .. +.++||++||.++.
T Consensus 728 ~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~ 807 (1878)
T 2uv9_A 728 YIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGT 807 (1878)
T ss_dssp HHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSS
T ss_pred HHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhc
Confidence 34 699999999986532 1 11 1234567899999999888763 11 23689999999876
Q ss_pred ccCCCCC
Q 028043 207 KFNELPW 213 (214)
Q Consensus 207 ~~~~~p~ 213 (214)
.+....|
T Consensus 808 ~gg~~aY 814 (1878)
T 2uv9_A 808 FGNDGLY 814 (1878)
T ss_dssp SSCCSSH
T ss_pred cCCchHH
Confidence 5433333
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=99.63 E-value=1.2e-16 Score=139.29 Aligned_cols=80 Identities=16% Similarity=0.094 Sum_probs=65.2
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHH-CCCeEEEEEcChhHHH---------------HHhcccCCCCEEEEEecCCChhcc
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLS-RNIKSRLLLRDPEKAT---------------TLFGKQDEETLQVCKGDTRNPKDL 144 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~-~G~~V~~~~r~~~~~~---------------~~~~~~~~~~~~~v~~Di~d~~~v 144 (214)
.+|++|||||++|||++++++|++ .|++|++++|+.+..+ +..+. .+..+..+.+|++|++++
T Consensus 60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~-~G~~a~~i~~Dvtd~~~v 138 (422)
T 3s8m_A 60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKA-AGLYSKSINGDAFSDAAR 138 (422)
T ss_dssp SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHH-TTCCEEEEESCTTSHHHH
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHh-cCCcEEEEEecCCCHHHH
Confidence 479999999999999999999999 9999999998754322 11111 145678899999999988
Q ss_pred chhh------h-CCCcEEEeccCC
Q 028043 145 DPAI------F-EGVTHVICCTGT 161 (214)
Q Consensus 145 ~~~~------~-~~~d~li~~Ag~ 161 (214)
++++ + +++|+||||||.
T Consensus 139 ~~~v~~i~~~~~G~IDiLVNNAG~ 162 (422)
T 3s8m_A 139 AQVIELIKTEMGGQVDLVVYSLAS 162 (422)
T ss_dssp HHHHHHHHHHSCSCEEEEEECCCC
T ss_pred HHHHHHHHHHcCCCCCEEEEcCcc
Confidence 7643 7 899999999997
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=99.63 E-value=1.4e-16 Score=149.64 Aligned_cols=126 Identities=22% Similarity=0.295 Sum_probs=98.7
Q ss_pred CCCEEEEEcCchHHHHHHHHHHH-HCCCe-EEEEEcCh---hHHHHHhcccC--CCCEEEEEecCCChhccchhhh----
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLL-SRNIK-SRLLLRDP---EKATTLFGKQD--EETLQVCKGDTRNPKDLDPAIF---- 149 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~-~~G~~-V~~~~r~~---~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~~---- 149 (214)
.+|+++||||+||||+++++.|+ ++|++ |++++|+. +..+++.+++. +.++.++.+|++|++++++++-
T Consensus 529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~ 608 (795)
T 3slk_A 529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPD 608 (795)
T ss_dssp TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence 57999999999999999999999 79995 99999983 33444433332 4568899999999999987441
Q ss_pred -CCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEEccccccc
Q 028043 150 -EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTK 207 (214)
Q Consensus 150 -~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~vSS~~~~~ 207 (214)
.++|+||||||+..... .+.++++..+++|+.|+.++.+++.+.+ +||++||.++..
T Consensus 609 ~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l-~iV~~SS~ag~~ 669 (795)
T 3slk_A 609 EHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV-ALVLFSSVSGVL 669 (795)
T ss_dssp TSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS-EEEEEEETHHHH
T ss_pred hCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC-EEEEEccHHhcC
Confidence 26999999999875321 3334456677899999999999986555 999999998754
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=1.2e-15 Score=129.65 Aligned_cols=105 Identities=22% Similarity=0.297 Sum_probs=83.2
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh----hHHHHHhcccCCCCEEEEEecCCChhccchhhhC--CCc
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP----EKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE--GVT 153 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~----~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~--~~d 153 (214)
+.+|+|+||||+|+||++++++|++.|++|++++|++ ++.+.+. .+...+++++.+|++|.+++.++ +. ++|
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~-~l~~~~v~~~~~Dl~d~~~l~~~-~~~~~~d 85 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFK-ALEDKGAIIVYGLINEQEAMEKI-LKEHEID 85 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHH-HHHHTTCEEEECCTTCHHHHHHH-HHHTTCC
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHH-HHHhCCcEEEEeecCCHHHHHHH-HhhCCCC
Confidence 3457899999999999999999999999999999976 3333221 12245789999999999999874 66 899
Q ss_pred EEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cC-CCeEEEEccc
Q 028043 154 HVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SS-LKRIVLVSSV 203 (214)
Q Consensus 154 ~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~-~~~iV~vSS~ 203 (214)
+|||+||. .|+.++.+++++++ .+ ++++|+ |+.
T Consensus 86 ~Vi~~a~~----------------~n~~~~~~l~~aa~~~g~v~~~v~-S~~ 120 (346)
T 3i6i_A 86 IVVSTVGG----------------ESILDQIALVKAMKAVGTIKRFLP-SEF 120 (346)
T ss_dssp EEEECCCG----------------GGGGGHHHHHHHHHHHCCCSEEEC-SCC
T ss_pred EEEECCch----------------hhHHHHHHHHHHHHHcCCceEEee-ccc
Confidence 99999985 27788999999985 46 888886 543
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.61 E-value=1.3e-15 Score=127.22 Aligned_cols=106 Identities=22% Similarity=0.282 Sum_probs=84.2
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcC-----hhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEE
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD-----PEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVI 156 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li 156 (214)
+|+|+||||+|+||++++++|+++|++|++++|+ +++.+.+. .+...+++++.+|++|++++.++ +.++|+||
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~d~~~l~~~-~~~~d~vi 81 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLL-YFKQLGAKLIEASLDDHQRLVDA-LKQVDVVI 81 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHH-HHHTTTCEEECCCSSCHHHHHHH-HTTCSEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHH-HHHhCCeEEEeCCCCCHHHHHHH-HhCCCEEE
Confidence 5789999999999999999999999999999998 33433321 12245688999999999999874 78899999
Q ss_pred eccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cC-CCeEEEEcc
Q 028043 157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SS-LKRIVLVSS 202 (214)
Q Consensus 157 ~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~-~~~iV~vSS 202 (214)
|+||.... ..|+.++.+++++++ .+ +++||+ |+
T Consensus 82 ~~a~~~~~------------~~~~~~~~~l~~aa~~~g~v~~~v~-S~ 116 (313)
T 1qyd_A 82 SALAGGVL------------SHHILEQLKLVEAIKEAGNIKRFLP-SE 116 (313)
T ss_dssp ECCCCSSS------------STTTTTHHHHHHHHHHSCCCSEEEC-SC
T ss_pred ECCccccc------------hhhHHHHHHHHHHHHhcCCCceEEe-cC
Confidence 99997531 126677899999885 56 889985 44
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.61 E-value=7.8e-16 Score=128.23 Aligned_cols=100 Identities=19% Similarity=0.323 Sum_probs=80.2
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh-------hHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcE
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP-------EKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTH 154 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~-------~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~ 154 (214)
+|+|+||||+|+||++++++|+++|++|++++|++ ++.+.+. .+...+++++.+|++|++++.+ ++.++|+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~-~l~~~~v~~v~~D~~d~~~l~~-~~~~~d~ 79 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELID-NYQSLGVILLEGDINDHETLVK-AIKQVDI 79 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHH-HHHHTTCEEEECCTTCHHHHHH-HHTTCSE
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHH-HHHhCCCEEEEeCCCCHHHHHH-HHhCCCE
Confidence 57899999999999999999999999999999986 4443321 1113468899999999999987 4788999
Q ss_pred EEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cC-CCeEEE
Q 028043 155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SS-LKRIVL 199 (214)
Q Consensus 155 li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~-~~~iV~ 199 (214)
|||+||... +.++.+++++++ .+ ++++|+
T Consensus 80 vi~~a~~~~----------------~~~~~~l~~aa~~~g~v~~~v~ 110 (307)
T 2gas_A 80 VICAAGRLL----------------IEDQVKIIKAIKEAGNVKKFFP 110 (307)
T ss_dssp EEECSSSSC----------------GGGHHHHHHHHHHHCCCSEEEC
T ss_pred EEECCcccc----------------cccHHHHHHHHHhcCCceEEee
Confidence 999999642 345678899884 46 889883
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.59 E-value=2.2e-15 Score=125.40 Aligned_cols=109 Identities=23% Similarity=0.288 Sum_probs=79.1
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccCCC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGTT 162 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag~~ 162 (214)
|+||||||||+||++++++|+++||+|++++|++... . +..|-.+. ..+.++|+|||+||..
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~----------~---~~~~~~~~-----~~l~~~d~vihla~~~ 62 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG----------R---ITWDELAA-----SGLPSCDAAVNLAGEN 62 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT----------E---EEHHHHHH-----HCCCSCSEEEECCCCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC----------e---eecchhhH-----hhccCCCEEEEeccCc
Confidence 5799999999999999999999999999999976421 1 22332221 2356899999999865
Q ss_pred CCC-CCCCCC--CCchhHHHHHHHHHHHHHhcc---CCCeEEEEccccccccC
Q 028043 163 AFP-SRRWDG--DNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 163 ~~~-~~~~~~--~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~~~ 209 (214)
... ...|.. ....++.|+.+|.+++++++. ...++|+.||.++|+..
T Consensus 63 i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~ 115 (298)
T 4b4o_A 63 ILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPS 115 (298)
T ss_dssp SSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCC
T ss_pred ccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCC
Confidence 322 122322 234568899999999998742 34568899999998754
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=9e-16 Score=128.82 Aligned_cols=102 Identities=21% Similarity=0.251 Sum_probs=80.1
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChh-HHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-KATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
+|+|+||||+|+||++++++|+++|++|++++|+++ ..+.+. .+...+++++.+|++|++++.++ +.++|+|||+||
T Consensus 11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-~l~~~~v~~v~~Dl~d~~~l~~a-~~~~d~vi~~a~ 88 (318)
T 2r6j_A 11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLD-EFQSLGAIIVKGELDEHEKLVEL-MKKVDVVISALA 88 (318)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHH-HHHHTTCEEEECCTTCHHHHHHH-HTTCSEEEECCC
T ss_pred CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHH-HhhcCCCEEEEecCCCHHHHHHH-HcCCCEEEECCc
Confidence 468999999999999999999999999999999874 322211 11134688999999999999874 788999999998
Q ss_pred CCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cC-CCeEEEEcc
Q 028043 161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SS-LKRIVLVSS 202 (214)
Q Consensus 161 ~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~-~~~iV~vSS 202 (214)
... +.++.+++++++ .+ +++||+ |+
T Consensus 89 ~~~----------------~~~~~~l~~aa~~~g~v~~~v~-S~ 115 (318)
T 2r6j_A 89 FPQ----------------ILDQFKILEAIKVAGNIKRFLP-SD 115 (318)
T ss_dssp GGG----------------STTHHHHHHHHHHHCCCCEEEC-SC
T ss_pred hhh----------------hHHHHHHHHHHHhcCCCCEEEe-ec
Confidence 532 335678899884 46 889885 44
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=1.1e-15 Score=133.71 Aligned_cols=82 Identities=15% Similarity=0.156 Sum_probs=65.7
Q ss_pred CCCCEEEEEcCchHHHHH--HHHHHHHCCCeEEEEEcChhH---------------HHHHhcccCCCCEEEEEecCCChh
Q 028043 80 SSSKLVLVAGGSGGVGQL--VVASLLSRNIKSRLLLRDPEK---------------ATTLFGKQDEETLQVCKGDTRNPK 142 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~--la~~L~~~G~~V~~~~r~~~~---------------~~~~~~~~~~~~~~~v~~Di~d~~ 142 (214)
..+|+++||||++|||++ ++++|++.|++|++++|+... .++..+.. +..+..+.+|++|++
T Consensus 58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~Dvtd~~ 136 (418)
T 4eue_A 58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKK-GLVAKNFIEDAFSNE 136 (418)
T ss_dssp CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHT-TCCEEEEESCTTCHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHc-CCcEEEEEeeCCCHH
Confidence 478999999999999999 999999999999999986432 22222221 456888999999999
Q ss_pred ccchhh------hCCCcEEEeccCCC
Q 028043 143 DLDPAI------FEGVTHVICCTGTT 162 (214)
Q Consensus 143 ~v~~~~------~~~~d~li~~Ag~~ 162 (214)
++++++ ++++|+||||||..
T Consensus 137 ~v~~~v~~i~~~~G~IDiLVnNAG~~ 162 (418)
T 4eue_A 137 TKDKVIKYIKDEFGKIDLFVYSLAAP 162 (418)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCCCS
T ss_pred HHHHHHHHHHHHcCCCCEEEECCccc
Confidence 888643 56899999999974
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.58 E-value=2e-15 Score=126.72 Aligned_cols=99 Identities=15% Similarity=0.260 Sum_probs=79.1
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh------hHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEE
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP------EKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHV 155 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~------~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~l 155 (214)
+|+|+||||+|+||++++++|+++|++|++++|++ ++.+.+. .+...+++++.+|++|++++.+ ++.++|+|
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~-~~~~~~v~~v~~D~~d~~~l~~-a~~~~d~v 81 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLRE-EFRSMGVTIIEGEMEEHEKMVS-VLKQVDIV 81 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHH-HHHHTTCEEEECCTTCHHHHHH-HHTTCSEE
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHH-HhhcCCcEEEEecCCCHHHHHH-HHcCCCEE
Confidence 57899999999999999999999999999999986 2322221 1113468899999999999987 47889999
Q ss_pred EeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cC-CCeEE
Q 028043 156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SS-LKRIV 198 (214)
Q Consensus 156 i~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~-~~~iV 198 (214)
||+||... +.++.+++++++ .+ +++||
T Consensus 82 i~~a~~~~----------------~~~~~~l~~aa~~~g~v~~~v 110 (321)
T 3c1o_A 82 ISALPFPM----------------ISSQIHIINAIKAAGNIKRFL 110 (321)
T ss_dssp EECCCGGG----------------SGGGHHHHHHHHHHCCCCEEE
T ss_pred EECCCccc----------------hhhHHHHHHHHHHhCCccEEe
Confidence 99998542 345688999884 46 88998
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.58 E-value=1.5e-15 Score=130.15 Aligned_cols=96 Identities=19% Similarity=0.224 Sum_probs=79.2
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccCC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGT 161 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag~ 161 (214)
|+|+||||+|+||++++++|+++|+ +|+.++|+ +|++++++ ++.++|+|||+||.
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~-----------------------~d~~~l~~-~~~~~d~Vih~a~~ 56 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ-----------------------TKEEELES-ALLKADFIVHLAGV 56 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT-----------------------CCHHHHHH-HHHHCSEEEECCCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC-----------------------CCHHHHHH-HhccCCEEEECCcC
Confidence 5799999999999999999999999 77776664 56777776 35679999999997
Q ss_pred CCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CCC-eEEEEccccccc
Q 028043 162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLK-RIVLVSSVGVTK 207 (214)
Q Consensus 162 ~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~~-~iV~vSS~~~~~ 207 (214)
... ++....+++|+.++.++++++++ +.+ ++|++||.++++
T Consensus 57 ~~~-----~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~ 99 (369)
T 3st7_A 57 NRP-----EHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ 99 (369)
T ss_dssp BCT-----TCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS
T ss_pred CCC-----CCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC
Confidence 652 24455678999999999999954 555 899999998875
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.56 E-value=2.7e-15 Score=125.02 Aligned_cols=103 Identities=25% Similarity=0.335 Sum_probs=80.3
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh------hHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEE
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP------EKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHV 155 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~------~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~l 155 (214)
+|+|+||||+|+||++++++|+++|++|++++|+. ++.+.+. .+...+++++.+|++|++++.++ +.++|+|
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~-~l~~~~v~~v~~D~~d~~~l~~~-~~~~d~v 81 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLE-SFKASGANIVHGSIDDHASLVEA-VKNVDVV 81 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHH-HHHTTTCEEECCCTTCHHHHHHH-HHTCSEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHH-HHHhCCCEEEEeccCCHHHHHHH-HcCCCEE
Confidence 57899999999999999999999999999999974 2322221 12245788999999999999874 6789999
Q ss_pred EeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cC-CCeEEEEccc
Q 028043 156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SS-LKRIVLVSSV 203 (214)
Q Consensus 156 i~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~-~~~iV~vSS~ 203 (214)
||+||... +.++.+++++++ .+ +++||+ |+.
T Consensus 82 i~~a~~~~----------------~~~~~~l~~aa~~~g~v~~~v~-S~~ 114 (308)
T 1qyc_A 82 ISTVGSLQ----------------IESQVNIIKAIKEVGTVKRFFP-SEF 114 (308)
T ss_dssp EECCCGGG----------------SGGGHHHHHHHHHHCCCSEEEC-SCC
T ss_pred EECCcchh----------------hhhHHHHHHHHHhcCCCceEee-ccc
Confidence 99998532 235678889884 46 889884 543
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=9.9e-15 Score=150.17 Aligned_cols=127 Identities=18% Similarity=0.151 Sum_probs=91.6
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCe-EEEEEcChhHH---HHHhccc--CCCCEEEEEecCCChhccchhh-----h
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRDPEKA---TTLFGKQ--DEETLQVCKGDTRNPKDLDPAI-----F 149 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~-V~~~~r~~~~~---~~~~~~~--~~~~~~~v~~Di~d~~~v~~~~-----~ 149 (214)
.+|+++||||+||||+++++.|+++|++ |++++|+..+. ++..+++ .+.++.++.+|++|.+++++++ +
T Consensus 1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 1962 (2512)
T 2vz8_A 1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQL 1962 (2512)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhc
Confidence 5799999999999999999999999997 78888875332 2222222 1456788899999999988643 5
Q ss_pred CCCcEEEeccCCCCC---CCCCCCCCCchhHHHHHHHHHHHHHhc---cCCCeEEEEccccccc
Q 028043 150 EGVTHVICCTGTTAF---PSRRWDGDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~---~~~~~~~~~~~~~vNv~g~~~l~~a~~---~~~~~iV~vSS~~~~~ 207 (214)
+++|+||||||+... ...+.++....+++|+.|+.++.+++. ...++||++||.++..
T Consensus 1963 g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~ 2026 (2512)
T 2vz8_A 1963 GPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGR 2026 (2512)
T ss_dssp SCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHT
T ss_pred CCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcC
Confidence 689999999998642 224456677788999999999988763 2458999999988754
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=7.6e-14 Score=144.22 Aligned_cols=112 Identities=20% Similarity=0.211 Sum_probs=86.4
Q ss_pred CCCCCEEEEEcCchH-HHHHHHHHHHHCCCeEEEEEcChhH-----HHHHhcccC--CCCEEEEEecCCChhccchh---
Q 028043 79 ASSSKLVLVAGGSGG-VGQLVVASLLSRNIKSRLLLRDPEK-----ATTLFGKQD--EETLQVCKGDTRNPKDLDPA--- 147 (214)
Q Consensus 79 ~~~~k~vlITGasgg-IG~~la~~L~~~G~~V~~~~r~~~~-----~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~--- 147 (214)
.+++|+++||||++| ||+++|++|++.|++|++++|+.+. ++++.+++. +..+..+.+|++|+++++++
T Consensus 2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~ 2212 (3089)
T 3zen_D 2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEW 2212 (3089)
T ss_dssp CCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred cCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHH
Confidence 378999999999999 9999999999999999999998765 555555443 34577899999999988764
Q ss_pred -------hhCCCcEEEeccCCC----CC----CCCCCCCCCch----hHHHHHHHHHHHHHh
Q 028043 148 -------IFEGVTHVICCTGTT----AF----PSRRWDGDNTP----EKVDWEGVRNLVSAL 190 (214)
Q Consensus 148 -------~~~~~d~li~~Ag~~----~~----~~~~~~~~~~~----~~vNv~g~~~l~~a~ 190 (214)
.++++|+||||||.. .. .....++.... +++|+.+++.+++++
T Consensus 2213 i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~ 2274 (3089)
T 3zen_D 2213 VGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGL 2274 (3089)
T ss_dssp HTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHH
T ss_pred HHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 246899999999981 11 11123334444 788999998888866
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=1.4e-13 Score=116.75 Aligned_cols=118 Identities=11% Similarity=0.102 Sum_probs=83.3
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCC-------eEEEEEcCh--hHHHHHhcccCCCCEEEEEecCCChhccchhhhCCC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNI-------KSRLLLRDP--EKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGV 152 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~ 152 (214)
.++|+||||+|+||++++..|+++|+ +|+++++++ ++.+.....+....+.++ .|+.+.+++.+ .+.++
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~-~di~~~~~~~~-a~~~~ 81 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLL-AGLEATDDPKV-AFKDA 81 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTE-EEEEEESCHHH-HTTTC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhccccccc-CCeEeccChHH-HhCCC
Confidence 36899999999999999999999996 899999874 222221111111112223 67777666665 36789
Q ss_pred cEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-C-CC-eEEEEcccc
Q 028043 153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-LK-RIVLVSSVG 204 (214)
Q Consensus 153 d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~-~~-~iV~vSS~~ 204 (214)
|+|||+||....+ .++..+.+++|+.++.++++++++ + .+ +++++|+..
T Consensus 82 D~Vih~Ag~~~~~---~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~ 133 (327)
T 1y7t_A 82 DYALLVGAAPRKA---GMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPA 133 (327)
T ss_dssp SEEEECCCCCCCT---TCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred CEEEECCCcCCCC---CCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCch
Confidence 9999999986532 234456789999999999999854 3 43 788877743
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=6.5e-13 Score=110.60 Aligned_cols=105 Identities=15% Similarity=0.089 Sum_probs=78.7
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCC-CCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDE-ETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
.+++|+++||||+||||+++++.|++.|++|++++|+.++.+++.+.+.. .++.++.+|++|++++++ .+..+|+|||
T Consensus 116 ~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~-~~~~~DvlVn 194 (287)
T 1lu9_A 116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAE-AVKGAHFVFT 194 (287)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHH-HTTTCSEEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHH-HHHhCCEEEE
Confidence 35789999999999999999999999999999999998887766544321 235678899999998876 4678999999
Q ss_pred ccCCCCCC--C--CC-CCCCCchhHHHHHHHH
Q 028043 158 CTGTTAFP--S--RR-WDGDNTPEKVDWEGVR 184 (214)
Q Consensus 158 ~Ag~~~~~--~--~~-~~~~~~~~~vNv~g~~ 184 (214)
|||....+ . .. .+.....+++|+.++.
T Consensus 195 ~ag~g~~~~~~~~~~~~~~~~~~~dvn~~~~~ 226 (287)
T 1lu9_A 195 AGAIGLELLPQAAWQNESSIEIVADYNAQPPL 226 (287)
T ss_dssp CCCTTCCSBCHHHHTTCTTCCEEEECCCSSSC
T ss_pred CCCccccCCChhHcCchHHHHHHHHhhhhhhH
Confidence 99864311 1 11 1333445666766655
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=99.36 E-value=5.9e-12 Score=90.05 Aligned_cols=75 Identities=19% Similarity=0.215 Sum_probs=65.4
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCC-CeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEecc
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~A 159 (214)
++|+|+|+|+ |+||+++++.|.+.| ++|++++|++++.+.+. ..++..+.+|+++.+++++ .+.++|+|||++
T Consensus 4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~~~~~~~~~d~~~~~~~~~-~~~~~d~vi~~~ 77 (118)
T 3ic5_A 4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----RMGVATKQVDAKDEAGLAK-ALGGFDAVISAA 77 (118)
T ss_dssp TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----TTTCEEEECCTTCHHHHHH-HTTTCSEEEECS
T ss_pred CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----hCCCcEEEecCCCHHHHHH-HHcCCCEEEECC
Confidence 4579999999 999999999999999 89999999998887765 3457788999999998887 468899999999
Q ss_pred CC
Q 028043 160 GT 161 (214)
Q Consensus 160 g~ 161 (214)
+.
T Consensus 78 ~~ 79 (118)
T 3ic5_A 78 PF 79 (118)
T ss_dssp CG
T ss_pred Cc
Confidence 63
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=99.09 E-value=2.2e-10 Score=98.60 Aligned_cols=84 Identities=13% Similarity=0.019 Sum_probs=65.3
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHH-HCCCeEEEEEcChhHH------------HHHhcccC--CCCEEEEEecCCChhcc
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLL-SRNIKSRLLLRDPEKA------------TTLFGKQD--EETLQVCKGDTRNPKDL 144 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~-~~G~~V~~~~r~~~~~------------~~~~~~~~--~~~~~~v~~Di~d~~~v 144 (214)
..+|++|||||++|||++.+..|+ +.|+.|+++.+..+.. ....+... +.....+.||++|++.+
T Consensus 48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i 127 (401)
T 4ggo_A 48 KAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIK 127 (401)
T ss_dssp CCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHH
Confidence 457999999999999999999998 6899999988754321 11111111 56788999999999988
Q ss_pred chhh------hCCCcEEEeccCCCC
Q 028043 145 DPAI------FEGVTHVICCTGTTA 163 (214)
Q Consensus 145 ~~~~------~~~~d~li~~Ag~~~ 163 (214)
++.+ ++++|+|||++|...
T Consensus 128 ~~vi~~i~~~~G~IDiLVhS~A~~~ 152 (401)
T 4ggo_A 128 AQVIEEAKKKGIKFDLIVYSLASPV 152 (401)
T ss_dssp HHHHHHHHHTTCCEEEEEECCCCSE
T ss_pred HHHHHHHHHhcCCCCEEEEeccccc
Confidence 8743 679999999999763
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=99.07 E-value=2.1e-10 Score=92.26 Aligned_cols=76 Identities=14% Similarity=0.230 Sum_probs=59.1
Q ss_pred CCCCCEEEEEcC----------------chHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChh
Q 028043 79 ASSSKLVLVAGG----------------SGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK 142 (214)
Q Consensus 79 ~~~~k~vlITGa----------------sggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~ 142 (214)
++.||+|+|||| +|+||+++|++|+++|++|++++++.. ++ . ..++ ..+|+++.+
T Consensus 5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~-----~-~~g~--~~~dv~~~~ 75 (226)
T 1u7z_A 5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP-----T-PPFV--KRVDVMTAL 75 (226)
T ss_dssp TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC-----C-CTTE--EEEECCSHH
T ss_pred CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc-----c-CCCC--eEEccCcHH
Confidence 468999999999 699999999999999999999988652 11 0 1233 357888876
Q ss_pred ccchhh---hCCCcEEEeccCCCC
Q 028043 143 DLDPAI---FEGVTHVICCTGTTA 163 (214)
Q Consensus 143 ~v~~~~---~~~~d~li~~Ag~~~ 163 (214)
++.+++ ++++|++|||||+..
T Consensus 76 ~~~~~v~~~~~~~Dili~~Aav~d 99 (226)
T 1u7z_A 76 EMEAAVNASVQQQNIFIGCAAVAD 99 (226)
T ss_dssp HHHHHHHHHGGGCSEEEECCBCCS
T ss_pred HHHHHHHHhcCCCCEEEECCcccC
Confidence 655433 678999999999875
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=99.01 E-value=4.3e-10 Score=95.40 Aligned_cols=116 Identities=10% Similarity=0.085 Sum_probs=79.7
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCC-------eEEEEEcC----hhHHHHHhcccCCCCEEEEEecCCChhccchhhhC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNI-------KSRLLLRD----PEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE 150 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~ 150 (214)
.++|+||||+|+||++++..|+..|. +|++++++ +++++.....+......+ ..|+...++..+ .+.
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~-~~~i~~~~~~~~-al~ 82 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPL-LAGMTAHADPMT-AFK 82 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTT-EEEEEEESSHHH-HTT
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccc-cCcEEEecCcHH-HhC
Confidence 36899999999999999999999885 79999998 554433211111110111 235554455554 368
Q ss_pred CCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-C-C-CeEEEEcc
Q 028043 151 GVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-L-KRIVLVSS 202 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~-~-~~iV~vSS 202 (214)
+.|+|||.||....+. ....+....|+.++..+++++++ . . .+||++|.
T Consensus 83 ~aD~Vi~~ag~~~~~g---~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SN 134 (329)
T 1b8p_A 83 DADVALLVGARPRGPG---MERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGN 134 (329)
T ss_dssp TCSEEEECCCCCCCTT---CCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred CCCEEEEeCCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccC
Confidence 8999999999754221 22345678999999999998843 2 3 48888886
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=99.00 E-value=1.1e-09 Score=81.19 Aligned_cols=75 Identities=20% Similarity=0.173 Sum_probs=63.3
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
.+++++|+|+ |.+|+++++.|.+.|++|+++++++++.+.+.+ .++.++.+|.+|++.++++...++|++|.+.+
T Consensus 5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~----~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~ 79 (141)
T 3llv_A 5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED----EGFDAVIADPTDESFYRSLDLEGVSAVLITGS 79 (141)
T ss_dssp -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----TTCEEEECCTTCHHHHHHSCCTTCSEEEECCS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----CCCcEEECCCCCHHHHHhCCcccCCEEEEecC
Confidence 4578999997 889999999999999999999999998877653 34678899999999888643568999998776
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=98.99 E-value=1.1e-09 Score=96.80 Aligned_cols=78 Identities=26% Similarity=0.185 Sum_probs=65.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
++|+|+|+| +|+||+++++.|++.|++|++++|++++.+++.+.+. ++..+.+|++|.+++++ ++.++|+|||+++
T Consensus 2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~--~~~~~~~Dv~d~~~l~~-~l~~~DvVIn~a~ 77 (450)
T 1ff9_A 2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQ--HSTPISLDVNDDAALDA-EVAKHDLVISLIP 77 (450)
T ss_dssp CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCT--TEEEEECCTTCHHHHHH-HHTTSSEEEECCC
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcC--CceEEEeecCCHHHHHH-HHcCCcEEEECCc
Confidence 468999998 7999999999999999999999999988877654432 46788899999988876 4678999999998
Q ss_pred CC
Q 028043 161 TT 162 (214)
Q Consensus 161 ~~ 162 (214)
..
T Consensus 78 ~~ 79 (450)
T 1ff9_A 78 YT 79 (450)
T ss_dssp --
T ss_pred cc
Confidence 74
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=98.97 E-value=1.1e-09 Score=80.74 Aligned_cols=77 Identities=17% Similarity=0.132 Sum_probs=61.5
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEecc
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~A 159 (214)
+++++|+|+|+ |++|+.+++.|.+.|++|++++|++++.+.+.+ .+...+.+|.+|.+.++++..+++|++|+++
T Consensus 4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~----~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~ 78 (144)
T 2hmt_A 4 IKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS----YATHAVIANATEENELLSLGIRNFEYVIVAI 78 (144)
T ss_dssp --CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTT----TCSEEEECCTTCHHHHHTTTGGGCSEEEECC
T ss_pred CcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----hCCEEEEeCCCCHHHHHhcCCCCCCEEEECC
Confidence 35678999998 999999999999999999999999887765432 2346678999998877653256899999998
Q ss_pred CC
Q 028043 160 GT 161 (214)
Q Consensus 160 g~ 161 (214)
+.
T Consensus 79 ~~ 80 (144)
T 2hmt_A 79 GA 80 (144)
T ss_dssp CS
T ss_pred CC
Confidence 73
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=98.96 E-value=3.1e-09 Score=90.07 Aligned_cols=114 Identities=17% Similarity=0.185 Sum_probs=78.2
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCC--CeEEEEEcChhHHH--HHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKAT--TLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G--~~V~~~~r~~~~~~--~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
.++|+||||+|++|..++..|+..| .+|++++++++... ++.+......+. + +.+.+++++ .+.+.|+|||
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~v~---~-~~~t~d~~~-al~gaDvVi~ 82 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVR---G-FLGQQQLEA-ALTGMDLIIV 82 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCSSCEEE---E-EESHHHHHH-HHTTCSEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcccccceEE---E-EeCCCCHHH-HcCCCCEEEE
Confidence 4689999999999999999999998 78999998776221 122211111121 1 223344544 3688999999
Q ss_pred ccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CCCeEEEEccc
Q 028043 158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSV 203 (214)
Q Consensus 158 ~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~~~iV~vSS~ 203 (214)
+||....+. ....+....|+.++..+++++.+ +.+.+|+++|.
T Consensus 83 ~ag~~~~~g---~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SN 126 (326)
T 1smk_A 83 PAGVPRKPG---MTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISN 126 (326)
T ss_dssp CCCCCCCSS---CCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred cCCcCCCCC---CCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC
Confidence 999754222 23345679999999999998843 56667777764
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=98.94 E-value=7.3e-10 Score=93.39 Aligned_cols=111 Identities=15% Similarity=0.123 Sum_probs=75.6
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCC--eEEEEEc--ChhHHHH----Hhcc--cCCCCEEEEEecCCCh-hccchhhhCC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLR--DPEKATT----LFGK--QDEETLQVCKGDTRNP-KDLDPAIFEG 151 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~--~V~~~~r--~~~~~~~----~~~~--~~~~~~~~v~~Di~d~-~~v~~~~~~~ 151 (214)
++|+||||+|+||++++..|+..|. ++.++++ ++++++. +.+. ..+..+ ++++. +++.+ .+.+
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~-----~i~~~~d~l~~-al~g 74 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDA-----NIYVESDENLR-IIDE 74 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCC-----EEEEEETTCGG-GGTT
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCe-----EEEeCCcchHH-HhCC
Confidence 4799999999999999999998885 6888888 6654432 1111 111122 22222 23444 3688
Q ss_pred CcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccc
Q 028043 152 VTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSV 203 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~ 203 (214)
+|+|||.||....+. ......+..|+.++..++++++ .. +.+|+++|-
T Consensus 75 aD~Vi~~Ag~~~~~g---~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SN 123 (313)
T 1hye_A 75 SDVVIITSGVPRKEG---MSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITN 123 (313)
T ss_dssp CSEEEECCSCCCCTT---CCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSS
T ss_pred CCEEEECCCCCCCCC---CcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecC
Confidence 999999999754221 2234567899999999999984 46 777777764
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=98.93 E-value=1.1e-09 Score=95.45 Aligned_cols=79 Identities=18% Similarity=0.179 Sum_probs=65.8
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCC---CeEEEEEcChhHHHHHhcccCC---CCEEEEEecCCChhccchhhhC--CCc
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRN---IKSRLLLRDPEKATTLFGKQDE---ETLQVCKGDTRNPKDLDPAIFE--GVT 153 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G---~~V~~~~r~~~~~~~~~~~~~~---~~~~~v~~Di~d~~~v~~~~~~--~~d 153 (214)
||+|+|+|| |+||+++++.|++.| .+|++.+|+.++++++.+.+.. .++..+.+|++|.++++++ +. ++|
T Consensus 1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~-l~~~~~D 78 (405)
T 4ina_A 1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVAL-INEVKPQ 78 (405)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHH-HHHHCCS
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHH-HHhhCCC
Confidence 368999998 899999999999998 4899999999998877655432 3578899999999999874 44 499
Q ss_pred EEEeccCCC
Q 028043 154 HVICCTGTT 162 (214)
Q Consensus 154 ~li~~Ag~~ 162 (214)
+||||+|..
T Consensus 79 vVin~ag~~ 87 (405)
T 4ina_A 79 IVLNIALPY 87 (405)
T ss_dssp EEEECSCGG
T ss_pred EEEECCCcc
Confidence 999999864
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=98.88 E-value=1.8e-09 Score=86.97 Aligned_cols=77 Identities=19% Similarity=0.353 Sum_probs=55.8
Q ss_pred CCCEEEEEcC----------------chHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhcc
Q 028043 81 SSKLVLVAGG----------------SGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144 (214)
Q Consensus 81 ~~k~vlITGa----------------sggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v 144 (214)
.||+|+|||| +|++|.++|++|+++|++|+++.|+.+... .. ..++.. .|+...+++
T Consensus 2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~----~~-~~~~~~--~~v~s~~em 74 (232)
T 2gk4_A 2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP----EP-HPNLSI--REITNTKDL 74 (232)
T ss_dssp -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC----CC-CTTEEE--EECCSHHHH
T ss_pred CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc----cC-CCCeEE--EEHhHHHHH
Confidence 4799999999 899999999999999999999999753210 00 123433 455555444
Q ss_pred chhh---hCCCcEEEeccCCCCC
Q 028043 145 DPAI---FEGVTHVICCTGTTAF 164 (214)
Q Consensus 145 ~~~~---~~~~d~li~~Ag~~~~ 164 (214)
.+++ ++++|++|||||+..+
T Consensus 75 ~~~v~~~~~~~Dili~aAAvsD~ 97 (232)
T 2gk4_A 75 LIEMQERVQDYQVLIHSMAVSDY 97 (232)
T ss_dssp HHHHHHHGGGCSEEEECSBCCSE
T ss_pred HHHHHHhcCCCCEEEEcCccccc
Confidence 3322 5789999999998753
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=98.88 E-value=8.4e-09 Score=86.48 Aligned_cols=110 Identities=16% Similarity=0.143 Sum_probs=74.9
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCC--eEEEEEc--ChhHHHHHhcccC-----CCCEEEEEecCCChhccchhhhCCCc
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLR--DPEKATTLFGKQD-----EETLQVCKGDTRNPKDLDPAIFEGVT 153 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~--~V~~~~r--~~~~~~~~~~~~~-----~~~~~~v~~Di~d~~~v~~~~~~~~d 153 (214)
++|+||||+|++|..++..|+..|. ++.++++ ++++++.....+. ...+.+.. | + .+ .+.+.|
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~----~~-a~~~aD 72 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--G----YE-DTAGSD 72 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--C----GG-GGTTCS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--C----HH-HhCCCC
Confidence 4799999999999999999998886 6888898 7655433211111 12233222 2 2 22 367899
Q ss_pred EEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CCCeEEEEccc
Q 028043 154 HVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSV 203 (214)
Q Consensus 154 ~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~~~iV~vSS~ 203 (214)
+|||.||....+. ....+.+..|+.++..+++++++ ....+|+++|-
T Consensus 73 vVi~~ag~~~~~g---~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SN 120 (303)
T 1o6z_A 73 VVVITAGIPRQPG---QTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSN 120 (303)
T ss_dssp EEEECCCCCCCTT---CCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCS
T ss_pred EEEEcCCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence 9999999754221 12234678999999999999854 55667777664
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.80 E-value=5.9e-09 Score=92.41 Aligned_cols=80 Identities=24% Similarity=0.223 Sum_probs=65.1
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHC-CCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEE
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVI 156 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li 156 (214)
..+++|+|+|+|| |++|+++++.|++. |++|++++|+.++++++.+. .++..+.+|+.|.+++.+ ++.++|+||
T Consensus 19 ~~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~---~~~~~~~~D~~d~~~l~~-~l~~~DvVI 93 (467)
T 2axq_A 19 GRHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP---SGSKAISLDVTDDSALDK-VLADNDVVI 93 (467)
T ss_dssp ----CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG---GTCEEEECCTTCHHHHHH-HHHTSSEEE
T ss_pred cCCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh---cCCcEEEEecCCHHHHHH-HHcCCCEEE
Confidence 3456789999997 99999999999998 78999999999988877644 235677899999888876 357899999
Q ss_pred eccCCC
Q 028043 157 CCTGTT 162 (214)
Q Consensus 157 ~~Ag~~ 162 (214)
|+++..
T Consensus 94 n~tp~~ 99 (467)
T 2axq_A 94 SLIPYT 99 (467)
T ss_dssp ECSCGG
T ss_pred ECCchh
Confidence 999875
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.77 E-value=3.2e-08 Score=72.42 Aligned_cols=75 Identities=25% Similarity=0.279 Sum_probs=60.6
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
+|+|+|+|+ |.+|+.+++.|.+.|++|++++|+++..+.+.+.. ++.++.+|.++.+.+.++...+.|+||++.+
T Consensus 4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~---~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~ 78 (140)
T 1lss_A 4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI---DALVINGDCTKIKTLEDAGIEDADMYIAVTG 78 (140)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC---SSEEEESCTTSHHHHHHTTTTTCSEEEECCS
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhc---CcEEEEcCCCCHHHHHHcCcccCCEEEEeeC
Confidence 468999986 99999999999999999999999998877654322 3567789999887776543568999999975
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.75 E-value=3.9e-08 Score=73.87 Aligned_cols=77 Identities=13% Similarity=0.166 Sum_probs=61.9
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcC-hhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD-PEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
.++++|+|+ |.+|+.+++.|.+.|++|++++++ +++.+.+.+.. ..++.++.+|.+|++.++++-+.+.|+||.+.+
T Consensus 3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~-~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~ 80 (153)
T 1id1_A 3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL-GDNADVIPGDSNDSSVLKKAGIDRCRAILALSD 80 (153)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH-CTTCEEEESCTTSHHHHHHHTTTTCSEEEECSS
T ss_pred CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh-cCCCeEEEcCCCCHHHHHHcChhhCCEEEEecC
Confidence 467999995 999999999999999999999997 45554443322 245788999999999888754678999998875
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=98.74 E-value=1.7e-08 Score=78.81 Aligned_cols=75 Identities=21% Similarity=0.189 Sum_probs=56.2
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchh--hh--CCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPA--IF--EGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~--~~--~~~d~li 156 (214)
.+++|+||||+||||..+++.+...|++|++++|++++.+.+.+ + +.. ...|.++.+..+.. .. +++|++|
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~-~-g~~---~~~d~~~~~~~~~~~~~~~~~~~D~vi 112 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR-L-GVE---YVGDSRSVDFADEILELTDGYGVDVVL 112 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT-T-CCS---EEEETTCSTHHHHHHHHTTTCCEEEEE
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c-CCC---EEeeCCcHHHHHHHHHHhCCCCCeEEE
Confidence 57899999999999999999999999999999999887766543 2 111 23577765433321 12 2699999
Q ss_pred eccC
Q 028043 157 CCTG 160 (214)
Q Consensus 157 ~~Ag 160 (214)
+|+|
T Consensus 113 ~~~g 116 (198)
T 1pqw_A 113 NSLA 116 (198)
T ss_dssp ECCC
T ss_pred ECCc
Confidence 9997
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=98.70 E-value=3e-08 Score=81.70 Aligned_cols=75 Identities=19% Similarity=0.238 Sum_probs=56.9
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCC-CEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEE-TLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
+.+|+++|+|+ ||+|+++++.|++.|++|++++|+.++++++.+.+... .+ |..+.+++.+ +++|+|||+
T Consensus 117 l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~-----~~~~~~~~~~---~~~DivVn~ 187 (271)
T 1nyt_A 117 RPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSI-----QALSMDELEG---HEFDLIINA 187 (271)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSE-----EECCSGGGTT---CCCSEEEEC
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCe-----eEecHHHhcc---CCCCEEEEC
Confidence 46799999998 79999999999999999999999998887776544311 22 2233333321 579999999
Q ss_pred cCCCC
Q 028043 159 TGTTA 163 (214)
Q Consensus 159 Ag~~~ 163 (214)
++...
T Consensus 188 t~~~~ 192 (271)
T 1nyt_A 188 TSSGI 192 (271)
T ss_dssp CSCGG
T ss_pred CCCCC
Confidence 99764
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=98.67 E-value=6.2e-08 Score=81.70 Aligned_cols=76 Identities=20% Similarity=0.168 Sum_probs=58.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh---h-CCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI---F-EGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~---~-~~~d~li 156 (214)
.+++|+||||+|+||..+++.+...|++|++++|++++.+.+ +++. .. ...|.++.+++.+.+ . +++|++|
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~g-~~---~~~d~~~~~~~~~~~~~~~~~~~d~vi 219 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQIG-FD---AAFNYKTVNSLEEALKKASPDGYDCYF 219 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTT-CS---EEEETTSCSCHHHHHHHHCTTCEEEEE
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HhcC-Cc---EEEecCCHHHHHHHHHHHhCCCCeEEE
Confidence 578999999999999999999999999999999998887766 3332 21 235877644443322 1 4699999
Q ss_pred eccCC
Q 028043 157 CCTGT 161 (214)
Q Consensus 157 ~~Ag~ 161 (214)
+|+|.
T Consensus 220 ~~~g~ 224 (333)
T 1v3u_A 220 DNVGG 224 (333)
T ss_dssp ESSCH
T ss_pred ECCCh
Confidence 99984
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=98.63 E-value=1.3e-07 Score=70.04 Aligned_cols=74 Identities=20% Similarity=0.256 Sum_probs=62.7
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
.++|+|.|+ |.+|+.+++.|.+.|++|+++++++++.+.+.+ .++.++.+|.++++.++++-..+.|++|.+.+
T Consensus 7 ~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~----~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~ 80 (140)
T 3fwz_A 7 CNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE----RGVRAVLGNAANEEIMQLAHLECAKWLILTIP 80 (140)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----TTCEEEESCTTSHHHHHHTTGGGCSEEEECCS
T ss_pred CCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----cCCCEEECCCCCHHHHHhcCcccCCEEEEECC
Confidence 357999995 999999999999999999999999998887653 35778999999999887654567999998775
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.57 E-value=1.6e-07 Score=80.50 Aligned_cols=76 Identities=18% Similarity=0.150 Sum_probs=61.9
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
..+.|+|+|.|| |++|+.+++.|.+ .++|.+.+|+.++++.+. ..+..+.+|+.|.+++.+ ++.+.|+|||+
T Consensus 13 ~g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~-----~~~~~~~~d~~d~~~l~~-~~~~~DvVi~~ 84 (365)
T 3abi_A 13 EGRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVK-----EFATPLKVDASNFDKLVE-VMKEFELVIGA 84 (365)
T ss_dssp ---CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHT-----TTSEEEECCTTCHHHHHH-HHTTCSEEEEC
T ss_pred cCCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHh-----ccCCcEEEecCCHHHHHH-HHhCCCEEEEe
Confidence 334578999998 9999999998854 689999999998888764 345678899999999987 47889999999
Q ss_pred cCCC
Q 028043 159 TGTT 162 (214)
Q Consensus 159 Ag~~ 162 (214)
++..
T Consensus 85 ~p~~ 88 (365)
T 3abi_A 85 LPGF 88 (365)
T ss_dssp CCGG
T ss_pred cCCc
Confidence 9864
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=98.56 E-value=2e-07 Score=70.11 Aligned_cols=77 Identities=19% Similarity=0.177 Sum_probs=61.0
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEecc
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~A 159 (214)
..+++|+|.|+ |.+|+.+++.|.+.|++|++++|++++.+.+.. ..+...+.+|..+.+.+.++...++|+||.+.
T Consensus 17 ~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~---~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~ 92 (155)
T 2g1u_A 17 QKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS---EFSGFTVVGDAAEFETLKECGMEKADMVFAFT 92 (155)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT---TCCSEEEESCTTSHHHHHTTTGGGCSEEEECS
T ss_pred cCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh---cCCCcEEEecCCCHHHHHHcCcccCCEEEEEe
Confidence 45789999995 999999999999999999999999887665431 22456677899887766653246799999987
Q ss_pred C
Q 028043 160 G 160 (214)
Q Consensus 160 g 160 (214)
+
T Consensus 93 ~ 93 (155)
T 2g1u_A 93 N 93 (155)
T ss_dssp S
T ss_pred C
Confidence 6
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=98.55 E-value=1.8e-07 Score=74.21 Aligned_cols=74 Identities=22% Similarity=0.228 Sum_probs=62.8
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
|+|+|+|+ |.+|+.+++.|.+.|++|+++++++++.+++.+. .++.++.+|.+|++.++++-..+.|++|.+.+
T Consensus 1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~---~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~ 74 (218)
T 3l4b_C 1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK---LKATIIHGDGSHKEILRDAEVSKNDVVVILTP 74 (218)
T ss_dssp CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH---SSSEEEESCTTSHHHHHHHTCCTTCEEEECCS
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH---cCCeEEEcCCCCHHHHHhcCcccCCEEEEecC
Confidence 46999995 9999999999999999999999999988776532 24678999999999888755678999997765
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.55 E-value=1.3e-07 Score=81.23 Aligned_cols=78 Identities=14% Similarity=0.116 Sum_probs=62.0
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
.+.+++|+|+|+ |+||+.+++.+...|++|++++|++++++.+.+... .. +.+|..+.+++++. +.++|+||++
T Consensus 163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g-~~---~~~~~~~~~~l~~~-~~~~DvVi~~ 236 (369)
T 2eez_A 163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFG-GR---VITLTATEANIKKS-VQHADLLIGA 236 (369)
T ss_dssp BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTT-TS---EEEEECCHHHHHHH-HHHCSEEEEC
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcC-ce---EEEecCCHHHHHHH-HhCCCEEEEC
Confidence 356799999998 999999999999999999999999988776554332 22 45677777777763 5789999999
Q ss_pred cCCC
Q 028043 159 TGTT 162 (214)
Q Consensus 159 Ag~~ 162 (214)
+|..
T Consensus 237 ~g~~ 240 (369)
T 2eez_A 237 VLVP 240 (369)
T ss_dssp CC--
T ss_pred CCCC
Confidence 9864
|
| >1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=98.54 E-value=3.2e-08 Score=82.16 Aligned_cols=78 Identities=22% Similarity=0.222 Sum_probs=56.8
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCC---CEEEEEecCCChhccchhhhCCCcEEE
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEE---TLQVCKGDTRNPKDLDPAIFEGVTHVI 156 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~v~~Di~d~~~v~~~~~~~~d~li 156 (214)
+.+|+++|||++ |+|+++++.|++.| +|++++|+.++.+++.+.+... .. .+.+|+.+. .+ .++++|+||
T Consensus 126 l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~-~~~~d~~~~---~~-~~~~~DilV 198 (287)
T 1nvt_A 126 VKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKF-GEEVKFSGL---DV-DLDGVDIII 198 (287)
T ss_dssp CCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCH-HHHEEEECT---TC-CCTTCCEEE
T ss_pred cCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhccccc-ceeEEEeeH---HH-hhCCCCEEE
Confidence 567999999986 99999999999999 9999999998877765443210 00 112344432 22 357899999
Q ss_pred eccCCCCC
Q 028043 157 CCTGTTAF 164 (214)
Q Consensus 157 ~~Ag~~~~ 164 (214)
||+|....
T Consensus 199 n~ag~~~~ 206 (287)
T 1nvt_A 199 NATPIGMY 206 (287)
T ss_dssp ECSCTTCT
T ss_pred ECCCCCCC
Confidence 99997653
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=98.54 E-value=2.7e-07 Score=78.07 Aligned_cols=77 Identities=25% Similarity=0.171 Sum_probs=58.6
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh---h-CCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI---F-EGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~---~-~~~d~li 156 (214)
.+++|+|+||+|+||..+++.+...|++|++++|++++.+.+.+.+. .. ...|.++.+++.+.+ . +++|++|
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g-~~---~~~d~~~~~~~~~~~~~~~~~~~d~vi 230 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFG-FD---DAFNYKEESDLTAALKRCFPNGIDIYF 230 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSC-CS---EEEETTSCSCSHHHHHHHCTTCEEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC-Cc---eEEecCCHHHHHHHHHHHhCCCCcEEE
Confidence 57899999999999999999999999999999999988877653332 11 234777654444322 1 3699999
Q ss_pred eccCC
Q 028043 157 CCTGT 161 (214)
Q Consensus 157 ~~Ag~ 161 (214)
+|+|.
T Consensus 231 ~~~g~ 235 (345)
T 2j3h_A 231 ENVGG 235 (345)
T ss_dssp ESSCH
T ss_pred ECCCH
Confidence 99984
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=98.53 E-value=2.5e-07 Score=77.92 Aligned_cols=82 Identities=13% Similarity=0.132 Sum_probs=62.5
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcC---hhHHHHHhcccCC-CCEEEEEecCCChhccchhhhCCCc
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRD---PEKATTLFGKQDE-ETLQVCKGDTRNPKDLDPAIFEGVT 153 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~---~~~~~~~~~~~~~-~~~~~v~~Di~d~~~v~~~~~~~~d 153 (214)
.+.+|+++|+|+ ||+|++++..|++.|+ +|+++.|+ .++.+++.+++.. .+..+...++.+.+++.+ ...+.|
T Consensus 151 ~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~-~l~~aD 228 (315)
T 3tnl_A 151 DIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRK-EIAESV 228 (315)
T ss_dssp CCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHH-HHHTCS
T ss_pred CccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHh-hhcCCC
Confidence 457899999997 8999999999999999 89999999 8887776654421 123344567777666654 356799
Q ss_pred EEEeccCCC
Q 028043 154 HVICCTGTT 162 (214)
Q Consensus 154 ~li~~Ag~~ 162 (214)
+|||+....
T Consensus 229 iIINaTp~G 237 (315)
T 3tnl_A 229 IFTNATGVG 237 (315)
T ss_dssp EEEECSSTT
T ss_pred EEEECccCC
Confidence 999988654
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.50 E-value=2.9e-07 Score=78.11 Aligned_cols=76 Identities=20% Similarity=0.190 Sum_probs=57.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh---h-CCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI---F-EGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~---~-~~~d~li 156 (214)
.+++|+|+||+|+||..+++.+...|++|++++|++++.+.+.+ +. .. ...|+++.+++.+.+ . +++|++|
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~-~g-~~---~~~d~~~~~~~~~~~~~~~~~~~D~vi 243 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRS-IG-GE---VFIDFTKEKDIVGAVLKATDGGAHGVI 243 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHH-TT-CC---EEEETTTCSCHHHHHHHHHTSCEEEEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHH-cC-Cc---eEEecCccHhHHHHHHHHhCCCCCEEE
Confidence 57899999999999999999999999999999999887765432 22 11 235877555544322 1 2699999
Q ss_pred eccCC
Q 028043 157 CCTGT 161 (214)
Q Consensus 157 ~~Ag~ 161 (214)
+++|.
T Consensus 244 ~~~g~ 248 (347)
T 2hcy_A 244 NVSVS 248 (347)
T ss_dssp ECSSC
T ss_pred ECCCc
Confidence 99984
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.50 E-value=2.6e-07 Score=71.19 Aligned_cols=77 Identities=22% Similarity=0.163 Sum_probs=62.3
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHC-CCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchh-hhCCCcEEE
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPA-IFEGVTHVI 156 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~-~~~~~d~li 156 (214)
.+.+++|+|.| .|.+|+.+++.|.+. |++|+++++++++.+.+.+ .++..+.+|.++++.++++ -..+.|+||
T Consensus 36 ~~~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~----~g~~~~~gd~~~~~~l~~~~~~~~ad~vi 110 (183)
T 3c85_A 36 NPGHAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQHRS----EGRNVISGDATDPDFWERILDTGHVKLVL 110 (183)
T ss_dssp CCTTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH----TTCCEEECCTTCHHHHHTBCSCCCCCEEE
T ss_pred CCCCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH----CCCCEEEcCCCCHHHHHhccCCCCCCEEE
Confidence 34567899998 599999999999999 9999999999988877543 2456788999998877653 256799999
Q ss_pred eccC
Q 028043 157 CCTG 160 (214)
Q Consensus 157 ~~Ag 160 (214)
.+.+
T Consensus 111 ~~~~ 114 (183)
T 3c85_A 111 LAMP 114 (183)
T ss_dssp ECCS
T ss_pred EeCC
Confidence 8775
|
| >2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A* | Back alignment and structure |
|---|
Probab=98.48 E-value=1.4e-07 Score=84.68 Aligned_cols=76 Identities=22% Similarity=0.171 Sum_probs=52.0
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
.+++|+++|||| ||+|+++++.|++.|++|++++|+.++++++.+.+.. .+ + ++.| +++.....+|+||||
T Consensus 361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~~-~~--~--~~~d---l~~~~~~~~DilVN~ 431 (523)
T 2o7s_A 361 PLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGG-KA--L--SLTD---LDNYHPEDGMVLANT 431 (523)
T ss_dssp -----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTTC--C--E--ETTT---TTTC--CCSEEEEEC
T ss_pred ccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCC-ce--e--eHHH---hhhccccCceEEEEC
Confidence 356789999999 6999999999999999999999999988887665531 11 1 2322 332112458999999
Q ss_pred cCCCC
Q 028043 159 TGTTA 163 (214)
Q Consensus 159 Ag~~~ 163 (214)
+|...
T Consensus 432 agvg~ 436 (523)
T 2o7s_A 432 TSMGM 436 (523)
T ss_dssp SSTTC
T ss_pred CCCCC
Confidence 99753
|
| >5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* | Back alignment and structure |
|---|
Probab=98.45 E-value=1.7e-07 Score=79.52 Aligned_cols=112 Identities=17% Similarity=0.151 Sum_probs=72.6
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCC--e-----EEEEEcCh--hHHHHHhcccC---CCCEEEEEecCCChhccchhhhC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNI--K-----SRLLLRDP--EKATTLFGKQD---EETLQVCKGDTRNPKDLDPAIFE 150 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~--~-----V~~~~r~~--~~~~~~~~~~~---~~~~~~v~~Di~d~~~v~~~~~~ 150 (214)
++|+||||+|+||++++..|+..|. + ++++++++ +.++.....+. .+-.. ++...+...+ .+.
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~----~~~~~~~~~~-~~~ 78 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLK----DVIATDKEEI-AFK 78 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEE----EEEEESCHHH-HTT
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccC----CEEEcCCcHH-HhC
Confidence 5899999999999999999998876 5 89999864 23322211111 11111 2211122232 367
Q ss_pred CCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CCC--eEEEEcc
Q 028043 151 GVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLK--RIVLVSS 202 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~~--~iV~vSS 202 (214)
+.|+||+.||....+.+ .-.+.++.|+..+..+++++++ +.+ +++.+|-
T Consensus 79 daDvVvitAg~prkpG~---tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsN 130 (333)
T 5mdh_A 79 DLDVAILVGSMPRRDGM---ERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGN 130 (333)
T ss_dssp TCSEEEECCSCCCCTTC---CTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred CCCEEEEeCCCCCCCCC---CHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence 89999999997643322 3345679999999999998843 433 4666653
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=98.45 E-value=5e-07 Score=76.88 Aligned_cols=75 Identities=15% Similarity=0.077 Sum_probs=56.2
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchh--hh-CCCcEEEec
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPA--IF-EGVTHVICC 158 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~--~~-~~~d~li~~ 158 (214)
++|+||||+|+||..+++.+...|+ +|+++++++++.+.+.+.+. .. ...|..+.+..+.. .. +++|++|+|
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g-~~---~~~d~~~~~~~~~~~~~~~~~~d~vi~~ 237 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELG-FD---AAINYKKDNVAEQLRESCPAGVDVYFDN 237 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSC-CS---EEEETTTSCHHHHHHHHCTTCEEEEEES
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcC-Cc---eEEecCchHHHHHHHHhcCCCCCEEEEC
Confidence 8999999999999999999999999 99999999988777654332 11 23577664322221 11 269999999
Q ss_pred cCC
Q 028043 159 TGT 161 (214)
Q Consensus 159 Ag~ 161 (214)
+|.
T Consensus 238 ~G~ 240 (357)
T 2zb4_A 238 VGG 240 (357)
T ss_dssp CCH
T ss_pred CCH
Confidence 983
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=98.44 E-value=3.8e-07 Score=76.64 Aligned_cols=75 Identities=17% Similarity=0.119 Sum_probs=56.7
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchh--hh--CCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPA--IF--EGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~--~~--~~~d~li 156 (214)
.+++|+||||+|+||..+++.+...|++|++++|++++.+.+.+ +. .. ...|.++.+..++. .. +++|++|
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~g-~~---~~~~~~~~~~~~~~~~~~~~~~~D~vi 214 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-AG-AW---QVINYREEDLVERLKEITGGKKVRVVY 214 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-HT-CS---EEEETTTSCHHHHHHHHTTTCCEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cC-CC---EEEECCCccHHHHHHHHhCCCCceEEE
Confidence 57899999999999999999999999999999999888776543 22 22 23577665433321 12 2699999
Q ss_pred eccC
Q 028043 157 CCTG 160 (214)
Q Consensus 157 ~~Ag 160 (214)
+|+|
T Consensus 215 ~~~g 218 (327)
T 1qor_A 215 DSVG 218 (327)
T ss_dssp ECSC
T ss_pred ECCc
Confidence 9999
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=98.43 E-value=3.7e-07 Score=77.01 Aligned_cols=77 Identities=16% Similarity=0.134 Sum_probs=57.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccch---hhhCCCcEEEe
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDP---AIFEGVTHVIC 157 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~---~~~~~~d~li~ 157 (214)
.+++|+|+||+|+||..+++.+...|++|++++|++++.+.+.+++.. . ...|..+.+..+. ..-+++|++|+
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~-~---~~~~~~~~~~~~~~~~~~~~~~d~vi~ 224 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGF-D---GAIDYKNEDLAAGLKRECPKGIDVFFD 224 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCC-S---EEEETTTSCHHHHHHHHCTTCEEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCC-C---EEEECCCHHHHHHHHHhcCCCceEEEE
Confidence 578999999999999999999999999999999999988876343321 1 2246665443322 11236999999
Q ss_pred ccCC
Q 028043 158 CTGT 161 (214)
Q Consensus 158 ~Ag~ 161 (214)
|+|.
T Consensus 225 ~~g~ 228 (336)
T 4b7c_A 225 NVGG 228 (336)
T ss_dssp SSCH
T ss_pred CCCc
Confidence 9983
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=98.42 E-value=4.3e-07 Score=76.55 Aligned_cols=76 Identities=20% Similarity=0.155 Sum_probs=57.1
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchh--hh--CCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPA--IF--EGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~--~~--~~~d~li 156 (214)
.+++|+||||+|+||..+++.+...|++|++++|++++.+.+.+ +. .. ...|.++.+..++. .. .++|++|
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~-~g-~~---~~~d~~~~~~~~~i~~~~~~~~~d~vi 219 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK-LG-CH---HTINYSTQDFAEVVREITGGKGVDVVY 219 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-HT-CS---EEEETTTSCHHHHHHHHHTTCCEEEEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cC-CC---EEEECCCHHHHHHHHHHhCCCCCeEEE
Confidence 57899999999999999999999999999999999887766543 22 22 23477664433321 12 3699999
Q ss_pred eccCC
Q 028043 157 CCTGT 161 (214)
Q Consensus 157 ~~Ag~ 161 (214)
+|+|.
T Consensus 220 ~~~g~ 224 (333)
T 1wly_A 220 DSIGK 224 (333)
T ss_dssp ECSCT
T ss_pred ECCcH
Confidence 99985
|
| >1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A* | Back alignment and structure |
|---|
Probab=98.41 E-value=3.3e-07 Score=75.49 Aligned_cols=76 Identities=21% Similarity=0.196 Sum_probs=55.5
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCC-CEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEE-TLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
.+.+|+++|+|+ ||+|++++..|++.|++|++.+|+.++.+++.+.+... .+. ..|+ +++.+ ++.|+|||
T Consensus 116 ~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~--~~~~---~~~~~---~~~DivIn 186 (272)
T 1p77_A 116 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQ--AVSM---DSIPL---QTYDLVIN 186 (272)
T ss_dssp CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEE--EEEG---GGCCC---SCCSEEEE
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeE--EeeH---HHhcc---CCCCEEEE
Confidence 346799999997 89999999999999999999999998888776544211 222 2232 22211 47999999
Q ss_pred ccCCCC
Q 028043 158 CTGTTA 163 (214)
Q Consensus 158 ~Ag~~~ 163 (214)
+++...
T Consensus 187 ~t~~~~ 192 (272)
T 1p77_A 187 ATSAGL 192 (272)
T ss_dssp CCCC--
T ss_pred CCCCCC
Confidence 999764
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=98.39 E-value=9e-07 Score=75.34 Aligned_cols=76 Identities=20% Similarity=0.187 Sum_probs=56.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchh--hhC--CCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPA--IFE--GVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~--~~~--~~d~li 156 (214)
.+++|+|+||+|+||..+++.+...|++|++++|++++.+.+.+ +. .. ...|..+.+..++. ..+ ++|++|
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~g-a~---~~~d~~~~~~~~~~~~~~~~~~~D~vi 244 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQ-NG-AH---EVFNHREVNYIDKIKKYVGEKGIDIII 244 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TT-CS---EEEETTSTTHHHHHHHHHCTTCEEEEE
T ss_pred CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH-cC-CC---EEEeCCCchHHHHHHHHcCCCCcEEEE
Confidence 57899999999999999999999999999999999988775432 22 11 23566664433321 122 699999
Q ss_pred eccCC
Q 028043 157 CCTGT 161 (214)
Q Consensus 157 ~~Ag~ 161 (214)
+|+|.
T Consensus 245 ~~~G~ 249 (351)
T 1yb5_A 245 EMLAN 249 (351)
T ss_dssp ESCHH
T ss_pred ECCCh
Confidence 99983
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=98.38 E-value=8.1e-07 Score=75.60 Aligned_cols=76 Identities=16% Similarity=0.193 Sum_probs=57.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchh--hh--CCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPA--IF--EGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~--~~--~~~d~li 156 (214)
.+++|+|+||+|+||..+++.+...|++|++++|++++.+.+. .+. .. ...|..+.+..++. .. +++|++|
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~g-~~---~~~~~~~~~~~~~~~~~~~~~~~d~vi 236 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAE-KLG-AA---AGFNYKKEDFSEATLKFTKGAGVNLIL 236 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHT-CS---EEEETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcC-Cc---EEEecCChHHHHHHHHHhcCCCceEEE
Confidence 5789999999999999999999999999999999998877653 232 22 23566654433321 12 2699999
Q ss_pred eccCC
Q 028043 157 CCTGT 161 (214)
Q Consensus 157 ~~Ag~ 161 (214)
+|+|.
T Consensus 237 ~~~G~ 241 (354)
T 2j8z_A 237 DCIGG 241 (354)
T ss_dssp ESSCG
T ss_pred ECCCc
Confidence 99985
|
| >1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* | Back alignment and structure |
|---|
Probab=98.36 E-value=1.4e-06 Score=73.31 Aligned_cols=111 Identities=21% Similarity=0.193 Sum_probs=72.1
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCC--CeEEEEEcChhHHH--HHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKAT--TLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G--~~V~~~~r~~~~~~--~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
|+|.|+||+|++|..++..|+..| .+|+++++++.... ++.+......+.... ..++.++ .+.+.|+||+.
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~~~~~~l~~~~----~t~d~~~-a~~~aDvVvi~ 75 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYL----GPEQLPD-CLKGCDVVVIP 75 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEE----SGGGHHH-HHTTCSEEEEC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhccCcCceEEEec----CCCCHHH-HhCCCCEEEEC
Confidence 479999999999999999999988 68999999872221 121111011121110 0123443 36789999999
Q ss_pred cCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc--CCCeEEEEc
Q 028043 159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS--SLKRIVLVS 201 (214)
Q Consensus 159 Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~--~~~~iV~vS 201 (214)
||....+. +.-.+....|+.....+++.+.+ ...++|++|
T Consensus 76 ag~~~~~g---~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~s 117 (314)
T 1mld_A 76 AGVPRKPG---MTRDDLFNTNATIVATLTAACAQHCPDAMICIIS 117 (314)
T ss_dssp CSCCCCTT---CCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred CCcCCCCC---CcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence 99764222 22234578899999999998743 334677654
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=98.27 E-value=1.4e-06 Score=73.82 Aligned_cols=77 Identities=17% Similarity=0.139 Sum_probs=56.9
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHC-CCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhc---cchhhh-CCCcEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD---LDPAIF-EGVTHV 155 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~---v~~~~~-~~~d~l 155 (214)
.+++|+|+||+|+||..+++.+... |++|+++++++++.+.+.+ +. .. ...|..+.+. +.+..- +++|++
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~-~g-~~---~~~~~~~~~~~~~~~~~~~~~~~d~v 244 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR-AG-AD---YVINASMQDPLAEIRRITESKGVDAV 244 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH-HT-CS---EEEETTTSCHHHHHHHHTTTSCEEEE
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-hC-CC---EEecCCCccHHHHHHHHhcCCCceEE
Confidence 5789999999999999999999998 9999999999988776543 22 22 2246665443 332211 579999
Q ss_pred EeccCCC
Q 028043 156 ICCTGTT 162 (214)
Q Consensus 156 i~~Ag~~ 162 (214)
|+++|..
T Consensus 245 i~~~g~~ 251 (347)
T 1jvb_A 245 IDLNNSE 251 (347)
T ss_dssp EESCCCH
T ss_pred EECCCCH
Confidence 9999853
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=98.25 E-value=2e-06 Score=71.81 Aligned_cols=77 Identities=25% Similarity=0.237 Sum_probs=57.5
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
+.+|+++|+|+ |++|++++..|++.|+ +|++.+|+.++.+++.+.+... .. ++.+.+++.+ .+.+.|+|||+
T Consensus 139 l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~-~~----~~~~~~~~~~-~~~~aDivIn~ 211 (297)
T 2egg_A 139 LDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDER-RS----AYFSLAEAET-RLAEYDIIINT 211 (297)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSS-SC----CEECHHHHHH-TGGGCSEEEEC
T ss_pred CCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhc-cC----ceeeHHHHHh-hhccCCEEEEC
Confidence 46789999997 8899999999999998 8999999999988876655321 00 1112233443 35679999999
Q ss_pred cCCCC
Q 028043 159 TGTTA 163 (214)
Q Consensus 159 Ag~~~ 163 (214)
.+...
T Consensus 212 t~~~~ 216 (297)
T 2egg_A 212 TSVGM 216 (297)
T ss_dssp SCTTC
T ss_pred CCCCC
Confidence 98764
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=98.23 E-value=2.3e-06 Score=70.97 Aligned_cols=79 Identities=22% Similarity=0.302 Sum_probs=57.7
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCC--CCEEEEEecCCChhccchhhhCCCcEE
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDE--ETLQVCKGDTRNPKDLDPAIFEGVTHV 155 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~--~~~~~v~~Di~d~~~v~~~~~~~~d~l 155 (214)
.+.+|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++.+.+.. ..+.+...+.. ++.+ ...+.|+|
T Consensus 124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~---~l~~-~l~~~DiV 198 (283)
T 3jyo_A 124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDAR---GIED-VIAAADGV 198 (283)
T ss_dssp TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECST---THHH-HHHHSSEE
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHH---HHHH-HHhcCCEE
Confidence 356899999997 8999999999999999 699999999988877554431 12233334433 3333 24568999
Q ss_pred EeccCCC
Q 028043 156 ICCTGTT 162 (214)
Q Consensus 156 i~~Ag~~ 162 (214)
||+....
T Consensus 199 InaTp~G 205 (283)
T 3jyo_A 199 VNATPMG 205 (283)
T ss_dssp EECSSTT
T ss_pred EECCCCC
Confidence 9988654
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=98.23 E-value=2.1e-06 Score=73.04 Aligned_cols=76 Identities=14% Similarity=0.129 Sum_probs=56.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccc---hhhhCCCcEEEe
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLD---PAIFEGVTHVIC 157 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~---~~~~~~~d~li~ 157 (214)
.+++|+|+||+|+||..+++.+...|++|+++++++++.+.+.+ +. .. ...|..+.+..+ +..-+++|++|+
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-lG-a~---~~~~~~~~~~~~~~~~~~~~g~Dvvid 241 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER-LG-AK---RGINYRSEDFAAVIKAETGQGVDIILD 241 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-HT-CS---EEEETTTSCHHHHHHHHHSSCEEEEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cC-CC---EEEeCCchHHHHHHHHHhCCCceEEEE
Confidence 57899999999999999999999999999999999988876543 22 11 124555543222 221237999999
Q ss_pred ccCC
Q 028043 158 CTGT 161 (214)
Q Consensus 158 ~Ag~ 161 (214)
++|.
T Consensus 242 ~~g~ 245 (353)
T 4dup_A 242 MIGA 245 (353)
T ss_dssp SCCG
T ss_pred CCCH
Confidence 9984
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=98.22 E-value=2.6e-06 Score=71.59 Aligned_cols=82 Identities=18% Similarity=0.204 Sum_probs=58.8
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcC---hhHHHHHhcccCC-CCEEEEEecCCChhccchhhhCCCc
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRD---PEKATTLFGKQDE-ETLQVCKGDTRNPKDLDPAIFEGVT 153 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~---~~~~~~~~~~~~~-~~~~~v~~Di~d~~~v~~~~~~~~d 153 (214)
.+.+|+++|+|+ ||+|++++..|++.|+ +|+++.|+ .++.+++.+++.. .+..+...+..+.+.+.+ ...+.|
T Consensus 145 ~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~-~l~~~D 222 (312)
T 3t4e_A 145 DMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTE-ALASAD 222 (312)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHH-HHHHCS
T ss_pred CcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHh-hccCce
Confidence 457899999996 9999999999999998 79999999 7777776554421 123333455555422232 245689
Q ss_pred EEEeccCCC
Q 028043 154 HVICCTGTT 162 (214)
Q Consensus 154 ~li~~Ag~~ 162 (214)
+|||+-...
T Consensus 223 iIINaTp~G 231 (312)
T 3t4e_A 223 ILTNGTKVG 231 (312)
T ss_dssp EEEECSSTT
T ss_pred EEEECCcCC
Confidence 999987654
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=98.21 E-value=1.7e-06 Score=69.18 Aligned_cols=72 Identities=19% Similarity=0.190 Sum_probs=60.5
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
.++++|.|+ |.+|+.+++.|.+.|+ |++++++++..+.+. .++.++.+|.+|++.++++-+.+.|.+|.+.+
T Consensus 9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-----~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~ 80 (234)
T 2aef_A 9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR-----SGANFVHGDPTRVSDLEKANVRGARAVIVDLE 80 (234)
T ss_dssp -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-----TTCEEEESCTTCHHHHHHTTCTTCSEEEECCS
T ss_pred CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-----cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCC
Confidence 468999996 9999999999999999 999999998877654 24788999999999887654678999998764
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=98.16 E-value=3.6e-06 Score=70.90 Aligned_cols=76 Identities=17% Similarity=0.176 Sum_probs=55.8
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchh--hh--CCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPA--IF--EGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~--~~--~~~d~li 156 (214)
.+++|+|+||+|+||...++.+...|++|+++++++++++.+.+ +. .. ...|..+.+..+.. .. .++|++|
T Consensus 148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~g-a~---~~~~~~~~~~~~~~~~~~~~~g~D~vi 222 (334)
T 3qwb_A 148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKE-YG-AE---YLINASKEDILRQVLKFTNGKGVDASF 222 (334)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TT-CS---EEEETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cC-Cc---EEEeCCCchHHHHHHHHhCCCCceEEE
Confidence 57899999999999999999999999999999999988775543 32 11 22455543322221 12 2699999
Q ss_pred eccCC
Q 028043 157 CCTGT 161 (214)
Q Consensus 157 ~~Ag~ 161 (214)
+++|.
T Consensus 223 d~~g~ 227 (334)
T 3qwb_A 223 DSVGK 227 (334)
T ss_dssp ECCGG
T ss_pred ECCCh
Confidence 99985
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.16 E-value=4.3e-06 Score=70.68 Aligned_cols=75 Identities=15% Similarity=0.081 Sum_probs=56.1
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccch--hhh--CCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDP--AIF--EGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~--~~~--~~~d~li 156 (214)
.+++|+|+||+|+||..+++.+...|++|+++++++++.+.+.+ +. .. ...|.++.+..++ ... +++|++|
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~-~g-a~---~~~d~~~~~~~~~~~~~~~~~~~d~vi 240 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKA-LG-AD---ETVNYTHPDWPKEVRRLTGGKGADKVV 240 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-HT-CS---EEEETTSTTHHHHHHHHTTTTCEEEEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-cC-CC---EEEcCCcccHHHHHHHHhCCCCceEEE
Confidence 57899999999999999999999999999999999988776543 22 22 1257766432221 112 2699999
Q ss_pred eccC
Q 028043 157 CCTG 160 (214)
Q Consensus 157 ~~Ag 160 (214)
+++|
T Consensus 241 ~~~g 244 (343)
T 2eih_A 241 DHTG 244 (343)
T ss_dssp ESSC
T ss_pred ECCC
Confidence 9998
|
| >3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=98.14 E-value=2.5e-06 Score=72.65 Aligned_cols=116 Identities=9% Similarity=0.022 Sum_probs=70.8
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC--eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
+++++|.|+|++|+||+.++..++..|. +|+++|+++++++.....+....+ ...++.-..+..+ .+.+.|+||.
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~--~~~~i~~t~d~~~-al~dADvVvi 82 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGF--EGLNLTFTSDIKE-ALTDAKYIVS 82 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCC--TTCCCEEESCHHH-HHTTEEEEEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcC--CCCceEEcCCHHH-HhCCCCEEEE
Confidence 3568999999999999999999999984 899999998765542211110000 0011111122333 3678999999
Q ss_pred ccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CC-C-eEEEEc
Q 028043 158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL-K-RIVLVS 201 (214)
Q Consensus 158 ~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~-~-~iV~vS 201 (214)
.||....+. +.-.+.+..|+.....+.+++.+ .. . .++.+|
T Consensus 83 taG~p~kpG---~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvs 126 (343)
T 3fi9_A 83 SGGAPRKEG---MTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIF 126 (343)
T ss_dssp CCC----------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECS
T ss_pred ccCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEec
Confidence 999754222 12234567898888888888743 32 3 255554
|
| >3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=98.13 E-value=7e-06 Score=67.65 Aligned_cols=75 Identities=21% Similarity=0.275 Sum_probs=56.0
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
.+.+|+++|+|+ ||+|++++..|++.|+ +|++..|+.++.+++.+.+....+..+ ++. ++.. .+.|+|||
T Consensus 117 ~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~--~~~---~l~~---~~~DivIn 187 (272)
T 3pwz_A 117 PLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRIS--RYE---ALEG---QSFDIVVN 187 (272)
T ss_dssp CCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEE--CSG---GGTT---CCCSEEEE
T ss_pred CccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEe--eHH---Hhcc---cCCCEEEE
Confidence 457899999996 7999999999999996 899999999998887766543223322 222 2221 46899999
Q ss_pred ccCCC
Q 028043 158 CTGTT 162 (214)
Q Consensus 158 ~Ag~~ 162 (214)
+....
T Consensus 188 aTp~g 192 (272)
T 3pwz_A 188 ATSAS 192 (272)
T ss_dssp CSSGG
T ss_pred CCCCC
Confidence 87653
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=98.12 E-value=3.6e-06 Score=70.63 Aligned_cols=76 Identities=18% Similarity=0.136 Sum_probs=56.1
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchh--hh--CCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPA--IF--EGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~--~~--~~~d~li 156 (214)
.+++|+|+||+|+||...++.+...|++|+++++++++.+.+.+ +. .. ...|..+.+..++. .. .++|++|
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~G-a~---~~~~~~~~~~~~~~~~~~~~~g~Dvvi 214 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKA-LG-AW---ETIDYSHEDVAKRVLELTDGKKCPVVY 214 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-HT-CS---EEEETTTSCHHHHHHHHTTTCCEEEEE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cC-CC---EEEeCCCccHHHHHHHHhCCCCceEEE
Confidence 57899999999999999999999999999999999988776543 22 11 22455554332221 12 2699999
Q ss_pred eccCC
Q 028043 157 CCTGT 161 (214)
Q Consensus 157 ~~Ag~ 161 (214)
+++|.
T Consensus 215 d~~g~ 219 (325)
T 3jyn_A 215 DGVGQ 219 (325)
T ss_dssp ESSCG
T ss_pred ECCCh
Confidence 99985
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=98.10 E-value=6.4e-06 Score=70.31 Aligned_cols=74 Identities=18% Similarity=0.223 Sum_probs=54.2
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh---hHHHHHhcccCCCCEEEEEecCCChhccchh--hhCCCc
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP---EKATTLFGKQDEETLQVCKGDTRNPKDLDPA--IFEGVT 153 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~---~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~--~~~~~d 153 (214)
.+++++|+|+|| |+||..+++.+...|++|+++++++ ++.+.+. .+ ++..+ | .+ +..++. .-+++|
T Consensus 178 ~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~-~~---ga~~v--~-~~-~~~~~~~~~~~~~d 248 (366)
T 2cdc_A 178 TLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIE-ET---KTNYY--N-SS-NGYDKLKDSVGKFD 248 (366)
T ss_dssp SSTTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHH-HH---TCEEE--E-CT-TCSHHHHHHHCCEE
T ss_pred cCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHH-Hh---CCcee--c-hH-HHHHHHHHhCCCCC
Confidence 345899999999 9999999999999999999999988 7765443 22 23333 6 55 322221 125799
Q ss_pred EEEeccCC
Q 028043 154 HVICCTGT 161 (214)
Q Consensus 154 ~li~~Ag~ 161 (214)
++|+++|.
T Consensus 249 ~vid~~g~ 256 (366)
T 2cdc_A 249 VIIDATGA 256 (366)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99999985
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=98.10 E-value=2e-06 Score=63.77 Aligned_cols=71 Identities=14% Similarity=0.228 Sum_probs=53.6
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccCC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGT 161 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag~ 161 (214)
+++|+|.|+ |++|+.+++.|.+.|++|++.+|++++.+++.+.+. .... +. +++.+ .+.+.|+||++.+.
T Consensus 21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~---~~~~--~~---~~~~~-~~~~~Divi~at~~ 90 (144)
T 3oj0_A 21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYE---YEYV--LI---NDIDS-LIKNNDVIITATSS 90 (144)
T ss_dssp CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHT---CEEE--EC---SCHHH-HHHTCSEEEECSCC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhC---CceE--ee---cCHHH-HhcCCCEEEEeCCC
Confidence 689999995 999999999999999999999999998887665543 1211 22 22333 24678999998876
Q ss_pred C
Q 028043 162 T 162 (214)
Q Consensus 162 ~ 162 (214)
.
T Consensus 91 ~ 91 (144)
T 3oj0_A 91 K 91 (144)
T ss_dssp S
T ss_pred C
Confidence 4
|
| >3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A* | Back alignment and structure |
|---|
Probab=98.09 E-value=1.4e-06 Score=65.86 Aligned_cols=69 Identities=13% Similarity=0.122 Sum_probs=50.7
Q ss_pred hHHHHHHHHHHHHCCCeEEEEEcChhHHH------HHhcccCCCCEEEEEecCCCh--hccchhh------hCCCcEEEe
Q 028043 92 GGVGQLVVASLLSRNIKSRLLLRDPEKAT------TLFGKQDEETLQVCKGDTRNP--KDLDPAI------FEGVTHVIC 157 (214)
Q Consensus 92 ggIG~~la~~L~~~G~~V~~~~r~~~~~~------~~~~~~~~~~~~~v~~Di~d~--~~v~~~~------~~~~d~li~ 157 (214)
|.++.+.++.|++.|++|++..|++...+ +..+.. +..+..+.+|++++ +++++++ +++ |+|||
T Consensus 26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~-G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLVn 103 (157)
T 3gxh_A 26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQA-GMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLVH 103 (157)
T ss_dssp BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHT-TCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEEE
T ss_pred CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHc-CCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEEE
Confidence 56889999999999999999988654321 111111 44566788999998 8877633 467 99999
Q ss_pred ccCCC
Q 028043 158 CTGTT 162 (214)
Q Consensus 158 ~Ag~~ 162 (214)
|||..
T Consensus 104 nAgg~ 108 (157)
T 3gxh_A 104 CLANY 108 (157)
T ss_dssp CSBSH
T ss_pred CCCCC
Confidence 99964
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=98.08 E-value=4.7e-06 Score=71.29 Aligned_cols=77 Identities=13% Similarity=0.140 Sum_probs=57.0
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEecc
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~A 159 (214)
..+++|+|+|+ |++|+.+++.+...|++|++++|++++++.+.+... ..+.. +..+.+++.+ .+.+.|+||+++
T Consensus 165 l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~-~~~~~---~~~~~~~~~~-~~~~~DvVI~~~ 238 (361)
T 1pjc_A 165 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFG-SRVEL---LYSNSAEIET-AVAEADLLIGAV 238 (361)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG-GGSEE---EECCHHHHHH-HHHTCSEEEECC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhC-ceeEe---eeCCHHHHHH-HHcCCCEEEECC
Confidence 45689999998 999999999999999999999999988877654321 11211 2223444544 246799999999
Q ss_pred CCC
Q 028043 160 GTT 162 (214)
Q Consensus 160 g~~ 162 (214)
+..
T Consensus 239 ~~~ 241 (361)
T 1pjc_A 239 LVP 241 (361)
T ss_dssp CCT
T ss_pred CcC
Confidence 864
|
| >3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* | Back alignment and structure |
|---|
Probab=98.08 E-value=7.7e-06 Score=67.70 Aligned_cols=74 Identities=19% Similarity=0.216 Sum_probs=54.9
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCC-CCEEEEEecCCChhccchhhhCCCcEEE
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDE-ETLQVCKGDTRNPKDLDPAIFEGVTHVI 156 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~-~~~~~v~~Di~d~~~v~~~~~~~~d~li 156 (214)
.+.+|+++|+|+ ||+|++++..|++.|+ +|++..|+.++.+++.+.+.. ..+... ++ +++. .+.|+||
T Consensus 123 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~--~~---~~l~----~~aDiII 192 (281)
T 3o8q_A 123 LLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQ--AF---EQLK----QSYDVII 192 (281)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEE--EG---GGCC----SCEEEEE
T ss_pred CccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEe--eH---HHhc----CCCCEEE
Confidence 357899999997 7999999999999996 899999999988887665432 123322 22 2222 4689999
Q ss_pred eccCCC
Q 028043 157 CCTGTT 162 (214)
Q Consensus 157 ~~Ag~~ 162 (214)
|+....
T Consensus 193 naTp~g 198 (281)
T 3o8q_A 193 NSTSAS 198 (281)
T ss_dssp ECSCCC
T ss_pred EcCcCC
Confidence 987654
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=98.07 E-value=6.3e-06 Score=71.84 Aligned_cols=74 Identities=28% Similarity=0.289 Sum_probs=62.8
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
+++|+|.|. |.+|+.+++.|.+.|++|++++++++..+.+.+ .++.++.+|.++++.++++-..+.|+||.+.+
T Consensus 4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~----~g~~vi~GDat~~~~L~~agi~~A~~viv~~~ 77 (413)
T 3l9w_A 4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK----FGMKVFYGDATRMDLLESAGAAKAEVLINAID 77 (413)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH----TTCCCEESCTTCHHHHHHTTTTTCSEEEECCS
T ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh----CCCeEEEcCCCCHHHHHhcCCCccCEEEECCC
Confidence 357999995 899999999999999999999999998887653 34668999999999988754678999987775
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=98.07 E-value=8.4e-06 Score=68.97 Aligned_cols=75 Identities=19% Similarity=0.178 Sum_probs=53.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCC-Ch-hccchhhhC--CCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTR-NP-KDLDPAIFE--GVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~-d~-~~v~~~~~~--~~d~li 156 (214)
.+++|+|+||+|+||..+++.+...|++|+++++++++.+.+.+ +. .. .+ .|.. +. +.+.+ ..+ ++|++|
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~g-a~-~v--~~~~~~~~~~v~~-~~~~~g~Dvvi 232 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS-VG-AD-IV--LPLEEGWAKAVRE-ATGGAGVDMVV 232 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-HT-CS-EE--EESSTTHHHHHHH-HTTTSCEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cC-Cc-EE--ecCchhHHHHHHH-HhCCCCceEEE
Confidence 57899999999999999999999999999999999988766543 22 11 12 2333 11 11222 122 699999
Q ss_pred eccCC
Q 028043 157 CCTGT 161 (214)
Q Consensus 157 ~~Ag~ 161 (214)
+++|.
T Consensus 233 d~~g~ 237 (342)
T 4eye_A 233 DPIGG 237 (342)
T ss_dssp ESCC-
T ss_pred ECCch
Confidence 99985
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=98.06 E-value=4.3e-06 Score=70.59 Aligned_cols=76 Identities=16% Similarity=0.180 Sum_probs=55.4
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchh--hh--CCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPA--IF--EGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~--~~--~~~d~li 156 (214)
.+++|+|+||+|+||..+++.+...|++|+++++++++.+.+.+ +. .. ...|..+.+..+.. .. .++|++|
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-lg-a~---~~~~~~~~~~~~~~~~~~~~~g~Dvvi 218 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR-LG-AA---YVIDTSTAPLYETVMELTNGIGADAAI 218 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-HT-CS---EEEETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-CC-Cc---EEEeCCcccHHHHHHHHhCCCCCcEEE
Confidence 57899999999999999999998899999999999888776543 22 22 12455543322221 12 2699999
Q ss_pred eccCC
Q 028043 157 CCTGT 161 (214)
Q Consensus 157 ~~Ag~ 161 (214)
+++|.
T Consensus 219 d~~g~ 223 (340)
T 3gms_A 219 DSIGG 223 (340)
T ss_dssp ESSCH
T ss_pred ECCCC
Confidence 99984
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=98.06 E-value=6.2e-06 Score=72.87 Aligned_cols=75 Identities=21% Similarity=0.359 Sum_probs=64.2
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
.|+|+|.| .|.+|+.+|+.|.+.|++|++++++++.++.+.+.+ ++.++.+|-++++.++++-....|++|-.-+
T Consensus 3 ~M~iiI~G-~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~---~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t~ 77 (461)
T 4g65_A 3 AMKIIILG-AGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY---DLRVVNGHASHPDVLHEAGAQDADMLVAVTN 77 (461)
T ss_dssp CEEEEEEC-CSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS---SCEEEESCTTCHHHHHHHTTTTCSEEEECCS
T ss_pred cCEEEEEC-CCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc---CcEEEEEcCCCHHHHHhcCCCcCCEEEEEcC
Confidence 47899999 589999999999999999999999999988876544 4678999999999999865678999886543
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=98.06 E-value=6.8e-06 Score=70.72 Aligned_cols=78 Identities=14% Similarity=0.058 Sum_probs=58.9
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
.+.+++|+|+|+ |+||+.+++.+...|++|++.+|++++++.+.+.+. ..+ ..+..+.+++.+ .+.+.|+||++
T Consensus 165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g-~~~---~~~~~~~~~l~~-~l~~aDvVi~~ 238 (377)
T 2vhw_A 165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFC-GRI---HTRYSSAYELEG-AVKRADLVIGA 238 (377)
T ss_dssp TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTT-TSS---EEEECCHHHHHH-HHHHCSEEEEC
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcC-Cee---EeccCCHHHHHH-HHcCCCEEEEC
Confidence 467899999998 999999999999999999999999988776544332 222 123344555554 35679999999
Q ss_pred cCCC
Q 028043 159 TGTT 162 (214)
Q Consensus 159 Ag~~ 162 (214)
++..
T Consensus 239 ~~~p 242 (377)
T 2vhw_A 239 VLVP 242 (377)
T ss_dssp CCCT
T ss_pred CCcC
Confidence 8754
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=98.05 E-value=1.5e-05 Score=68.12 Aligned_cols=76 Identities=14% Similarity=0.182 Sum_probs=58.7
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
.+++|+|+|+ |+||..+++.+...|++|+++++++++.+.+.+.+. .. ...|..+.+.+++ ..+++|++|+++|
T Consensus 187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lG-a~---~v~~~~~~~~~~~-~~~~~D~vid~~g 260 (366)
T 1yqd_A 187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFG-AD---SFLVSRDQEQMQA-AAGTLDGIIDTVS 260 (366)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSC-CS---EEEETTCHHHHHH-TTTCEEEEEECCS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcC-Cc---eEEeccCHHHHHH-hhCCCCEEEECCC
Confidence 5789999996 999999999999999999999999988776553332 11 2246777666654 3468999999998
Q ss_pred CC
Q 028043 161 TT 162 (214)
Q Consensus 161 ~~ 162 (214)
..
T Consensus 261 ~~ 262 (366)
T 1yqd_A 261 AV 262 (366)
T ss_dssp SC
T ss_pred cH
Confidence 53
|
| >3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* | Back alignment and structure |
|---|
Probab=98.04 E-value=8.6e-05 Score=62.66 Aligned_cols=109 Identities=17% Similarity=0.200 Sum_probs=71.8
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC--eEEEEEcChhHHHH----HhcccC--CCCEEEEEecCCChhccchhhhCCC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATT----LFGKQD--EETLQVCKGDTRNPKDLDPAIFEGV 152 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~----~~~~~~--~~~~~~v~~Di~d~~~v~~~~~~~~ 152 (214)
..++|.|+|+ |.+|..++..|+..|. +|+++++++++++. +.+... ..++.....| . + .+.+.
T Consensus 4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~---~--a~~~a 74 (326)
T 3pqe_A 4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---Y---E--DCKDA 74 (326)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---G---G--GGTTC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---H---H--HhCCC
Confidence 4578999996 9999999999999987 89999999887654 222111 1233332222 1 2 25689
Q ss_pred cEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-C-CCeEEEEc
Q 028043 153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-LKRIVLVS 201 (214)
Q Consensus 153 d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~-~~~iV~vS 201 (214)
|++|..||....+. +.-.+.+..|..-...+++++.+ . ...++.+|
T Consensus 75 DvVvi~ag~p~kpG---~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvt 122 (326)
T 3pqe_A 75 DIVCICAGANQKPG---ETRLELVEKNLKIFKGIVSEVMASGFDGIFLVAT 122 (326)
T ss_dssp SEEEECCSCCCCTT---CCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred CEEEEecccCCCCC---ccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcC
Confidence 99999999754222 12233567788888888887743 2 23555554
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=98.03 E-value=4.5e-06 Score=69.29 Aligned_cols=73 Identities=18% Similarity=0.235 Sum_probs=54.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCC-hhccchhhhCCCcEEEecc
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN-PKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d-~~~v~~~~~~~~d~li~~A 159 (214)
.+++|+|+||+|+||..+++.+...|++|+++++++++.+.+.+ +. .. ...|..+ .+..+ . .+++|++|+ +
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~g-a~---~~~~~~~~~~~~~-~-~~~~d~vid-~ 196 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA-LG-AE---EAATYAEVPERAK-A-WGGLDLVLE-V 196 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH-TT-CS---EEEEGGGHHHHHH-H-TTSEEEEEE-C
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-cC-CC---EEEECCcchhHHH-H-hcCceEEEE-C
Confidence 46899999999999999999999999999999999887765543 22 11 1245554 33223 2 367999999 8
Q ss_pred CC
Q 028043 160 GT 161 (214)
Q Consensus 160 g~ 161 (214)
|.
T Consensus 197 g~ 198 (302)
T 1iz0_A 197 RG 198 (302)
T ss_dssp SC
T ss_pred CH
Confidence 74
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=98.03 E-value=6.5e-06 Score=70.22 Aligned_cols=75 Identities=21% Similarity=0.218 Sum_probs=54.6
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh---h-CCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI---F-EGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~---~-~~~d~li 156 (214)
.+++|+|+||+|+||..+++.+...|++|+++++++++.+.+.+ +. .. ...|..+.+ +.+.+ . +++|++|
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~-~G-a~---~~~~~~~~~-~~~~~~~~~~~g~D~vi 236 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS-LG-CD---RPINYKTEP-VGTVLKQEYPEGVDVVY 236 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TT-CS---EEEETTTSC-HHHHHHHHCTTCEEEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-cC-Cc---EEEecCChh-HHHHHHHhcCCCCCEEE
Confidence 47899999999999999999999999999999999888776543 22 11 123554432 22211 2 3699999
Q ss_pred eccCC
Q 028043 157 CCTGT 161 (214)
Q Consensus 157 ~~Ag~ 161 (214)
+++|.
T Consensus 237 d~~g~ 241 (362)
T 2c0c_A 237 ESVGG 241 (362)
T ss_dssp ECSCT
T ss_pred ECCCH
Confidence 99984
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A | Back alignment and structure |
|---|
Probab=98.03 E-value=6.1e-06 Score=72.28 Aligned_cols=44 Identities=18% Similarity=0.317 Sum_probs=39.6
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHh
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF 123 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~ 123 (214)
..|++|+|+||+|+||...++.+...|++|+++++++++.+.+.
T Consensus 219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~ 262 (447)
T 4a0s_A 219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVR 262 (447)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 35789999999999999999999999999999999998887664
|
| >3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A* | Back alignment and structure |
|---|
Probab=97.96 E-value=2.7e-05 Score=68.94 Aligned_cols=44 Identities=25% Similarity=0.200 Sum_probs=38.6
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHH
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTL 122 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~ 122 (214)
..+.||+++|||++ +||+.+++.|++.|++|+++++++.+..+.
T Consensus 261 ~~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~A 304 (488)
T 3ond_A 261 VMIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQA 304 (488)
T ss_dssp CCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred CcccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence 34689999999976 999999999999999999999998776543
|
| >3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=97.92 E-value=7.3e-05 Score=63.09 Aligned_cols=110 Identities=10% Similarity=0.127 Sum_probs=64.0
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC--eEEEEEcChhHHHHHhcccCC-----CCEEEEEecCCChhccchhhhCCC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDE-----ETLQVCKGDTRNPKDLDPAIFEGV 152 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~-----~~~~~v~~Di~d~~~v~~~~~~~~ 152 (214)
..+++|.|+|+ |+||+.++..|+..|. +|+++++++++++.....+.. ..+.+... +. + .+.+.
T Consensus 7 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~---~~---~--a~~~a 77 (326)
T 3vku_A 7 KDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSA---EY---S--DAKDA 77 (326)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEEC---CG---G--GGTTC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEEC---cH---H--HhcCC
Confidence 35689999996 9999999999999887 899999998876533221111 12222211 11 2 25689
Q ss_pred cEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-C-CCeEEEEc
Q 028043 153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-LKRIVLVS 201 (214)
Q Consensus 153 d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~-~~~iV~vS 201 (214)
|+||+.||....|.+ .-.+.++.|..-...+.+++.+ . ...++.+|
T Consensus 78 DiVvi~ag~~~kpG~---tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvt 125 (326)
T 3vku_A 78 DLVVITAGAPQKPGE---TRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA 125 (326)
T ss_dssp SEEEECCCCC-------------------CHHHHHHHHHTTTCCSEEEECS
T ss_pred CEEEECCCCCCCCCc---hHHHHHHHHHHHHHHHHHHHHhcCCceEEEEcc
Confidence 999999997543322 2233467788777888887743 2 23455554
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=97.91 E-value=1.7e-05 Score=66.95 Aligned_cols=74 Identities=14% Similarity=0.123 Sum_probs=55.2
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhc---cchhhhCCCcEEEe
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD---LDPAIFEGVTHVIC 157 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~---v~~~~~~~~d~li~ 157 (214)
.+++|+|+|| |+||..+++.+...|++|++++|++++.+.+.+ +. .. ...|..+.+. +.+. .+++|++|+
T Consensus 164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-lG-a~---~~~d~~~~~~~~~~~~~-~~~~d~vid 236 (339)
T 1rjw_A 164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE-LG-AD---LVVNPLKEDAAKFMKEK-VGGVHAAVV 236 (339)
T ss_dssp TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-TT-CS---EEECTTTSCHHHHHHHH-HSSEEEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-CC-CC---EEecCCCccHHHHHHHH-hCCCCEEEE
Confidence 4689999999 889999999999999999999999988776543 22 11 2257665332 2222 268999999
Q ss_pred ccCC
Q 028043 158 CTGT 161 (214)
Q Consensus 158 ~Ag~ 161 (214)
++|.
T Consensus 237 ~~g~ 240 (339)
T 1rjw_A 237 TAVS 240 (339)
T ss_dssp SSCC
T ss_pred CCCC
Confidence 9984
|
| >1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1 | Back alignment and structure |
|---|
Probab=97.90 E-value=2.4e-05 Score=65.61 Aligned_cols=85 Identities=15% Similarity=0.225 Sum_probs=57.9
Q ss_pred CCCCE-EEEE-cCc-----------------hHHHHHHHHHHHHCCCeEEEEEcChhHHH------H--Hhc---cc--C
Q 028043 80 SSSKL-VLVA-GGS-----------------GGVGQLVVASLLSRNIKSRLLLRDPEKAT------T--LFG---KQ--D 127 (214)
Q Consensus 80 ~~~k~-vlIT-Gas-----------------ggIG~~la~~L~~~G~~V~~~~r~~~~~~------~--~~~---~~--~ 127 (214)
+.||+ |||| |+| |-.|.++|++++++|++|+++.+..+-.. . ..+ .. .
T Consensus 34 l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~sl~p~~r~~~~~~~~~~~~~~~~~ 113 (313)
T 1p9o_A 34 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARSAFPYAHRFPPQTWLSALRPSGPA 113 (313)
T ss_dssp HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTSCCTTGGGSCHHHHHHHCEECCC-
T ss_pred hcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCCcCcchhccCccchhhhhcccccc
Confidence 35666 9999 555 77999999999999999999988543110 0 000 00 1
Q ss_pred CCCEEEEEecCCChhccchhh------------------------------------hCCCcEEEeccCCCCC
Q 028043 128 EETLQVCKGDTRNPKDLDPAI------------------------------------FEGVTHVICCTGTTAF 164 (214)
Q Consensus 128 ~~~~~~v~~Di~d~~~v~~~~------------------------------------~~~~d~li~~Ag~~~~ 164 (214)
..++..+..|+...+++.+++ +++.|++|++|++..+
T Consensus 114 ~~~~~~i~v~v~sa~~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~~~~di~i~aAAVsDf 186 (313)
T 1p9o_A 114 LSGLLSLEAEENALPGFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVSDF 186 (313)
T ss_dssp CCSEEEEEEETTTSTTHHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGGGGGEEEEECSBCCSE
T ss_pred ccccceeeeccccHHHHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhccCCCCEEEECCchhhc
Confidence 234556777887766655433 2579999999999864
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=97.87 E-value=2.7e-05 Score=65.87 Aligned_cols=72 Identities=19% Similarity=0.244 Sum_probs=52.1
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh---h--CCCcEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI---F--EGVTHV 155 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~---~--~~~d~l 155 (214)
.+++|+|+||+|+||...++.+...|++|+++ +++++.+.+.+ +. +.. .| .+. ++.+.+ . .++|++
T Consensus 150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~-lG---a~~--i~-~~~-~~~~~~~~~~~~~g~D~v 220 (343)
T 3gaz_A 150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRD-LG---ATP--ID-ASR-EPEDYAAEHTAGQGFDLV 220 (343)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHH-HT---SEE--EE-TTS-CHHHHHHHHHTTSCEEEE
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHH-cC---CCE--ec-cCC-CHHHHHHHHhcCCCceEE
Confidence 57899999999999999999999999999998 88877665433 22 232 44 322 222211 2 369999
Q ss_pred EeccCC
Q 028043 156 ICCTGT 161 (214)
Q Consensus 156 i~~Ag~ 161 (214)
|+++|.
T Consensus 221 id~~g~ 226 (343)
T 3gaz_A 221 YDTLGG 226 (343)
T ss_dssp EESSCT
T ss_pred EECCCc
Confidence 999984
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} | Back alignment and structure |
|---|
Probab=97.86 E-value=2.4e-05 Score=66.22 Aligned_cols=76 Identities=17% Similarity=0.187 Sum_probs=53.9
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCC--hhccchhhhCCCcEEEec
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN--PKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d--~~~v~~~~~~~~d~li~~ 158 (214)
.+++|+|+||+|+||...++.+...|++|+++++++++.+.+.+ +. .. ...|..+ .+.+++..-+++|++|++
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-lG-a~---~vi~~~~~~~~~~~~~~~~g~Dvv~d~ 224 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK-MG-AD---IVLNHKESLLNQFKTQGIELVDYVFCT 224 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH-HT-CS---EEECTTSCHHHHHHHHTCCCEEEEEES
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cC-Cc---EEEECCccHHHHHHHhCCCCccEEEEC
Confidence 57899999999999999999999999999999999988776554 22 11 1133332 112222111369999999
Q ss_pred cCC
Q 028043 159 TGT 161 (214)
Q Consensus 159 Ag~ 161 (214)
+|.
T Consensus 225 ~g~ 227 (346)
T 3fbg_A 225 FNT 227 (346)
T ss_dssp SCH
T ss_pred CCc
Confidence 874
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=97.85 E-value=2e-05 Score=66.70 Aligned_cols=75 Identities=11% Similarity=0.135 Sum_probs=54.3
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchh--hh--CCCcEEEe
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPA--IF--EGVTHVIC 157 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~--~~--~~~d~li~ 157 (214)
+++++|+||+|+||...++.+...|++|+++++++++.+.+.+ +. .. ...|..+.+..+.. .. .++|++|+
T Consensus 165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-~G-a~---~~~~~~~~~~~~~v~~~~~~~g~D~vid 239 (349)
T 3pi7_A 165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKD-IG-AA---HVLNEKAPDFEATLREVMKAEQPRIFLD 239 (349)
T ss_dssp CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHH-HT-CS---EEEETTSTTHHHHHHHHHHHHCCCEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cC-CC---EEEECCcHHHHHHHHHHhcCCCCcEEEE
Confidence 3799999999999999999999999999999999988776543 22 11 12455543322211 12 37999999
Q ss_pred ccCC
Q 028043 158 CTGT 161 (214)
Q Consensus 158 ~Ag~ 161 (214)
++|.
T Consensus 240 ~~g~ 243 (349)
T 3pi7_A 240 AVTG 243 (349)
T ss_dssp SSCH
T ss_pred CCCC
Confidence 9983
|
| >4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ... | Back alignment and structure |
|---|
Probab=97.84 E-value=4.9e-05 Score=64.29 Aligned_cols=111 Identities=14% Similarity=0.168 Sum_probs=73.6
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC--eEEEEEcChhHHHHHhcccC-----CCCEEEEEecCCChhccchhhhCCC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQD-----EETLQVCKGDTRNPKDLDPAIFEGV 152 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~~~v~~Di~d~~~v~~~~~~~~ 152 (214)
...++|.|+|| |.+|..++..|+.+|. +|+++++++++++.....+. ......+.. .|. + .+.+.
T Consensus 17 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~--~d~---~--~~~~a 88 (331)
T 4aj2_A 17 VPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSS--KDY---S--VTANS 88 (331)
T ss_dssp CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEEC--SSG---G--GGTTE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEc--CCH---H--HhCCC
Confidence 45689999997 9999999999999987 89999999876654322211 011122221 222 2 25679
Q ss_pred cEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-C-CCeEEEEc
Q 028043 153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-LKRIVLVS 201 (214)
Q Consensus 153 d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~-~~~iV~vS 201 (214)
|++|..||....|. +.-.+.++.|..-...+.+++.+ . ...++.+|
T Consensus 89 DiVvi~aG~~~kpG---~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvt 136 (331)
T 4aj2_A 89 KLVIITAGARQQEG---ESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVS 136 (331)
T ss_dssp EEEEECCSCCCCTT---CCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred CEEEEccCCCCCCC---ccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 99999999765332 22345678898888888887743 2 34555555
|
| >3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=97.84 E-value=0.00011 Score=61.70 Aligned_cols=113 Identities=12% Similarity=0.044 Sum_probs=71.5
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcC--hhHHHHHhcccC------CCCEEEEEecCCChhccchhh
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRD--PEKATTLFGKQD------EETLQVCKGDTRNPKDLDPAI 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~--~~~~~~~~~~~~------~~~~~~v~~Di~d~~~v~~~~ 148 (214)
|.++.++|.|.|+ |.+|..++..|+..|. +|++.+++ +++.+.....+. .....+... .|. + .
T Consensus 4 m~~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t--~d~---~--a 75 (315)
T 3tl2_A 4 MTIKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGT--SDY---A--D 75 (315)
T ss_dssp CCCCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEE--SCG---G--G
T ss_pred cccCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEc--CCH---H--H
Confidence 4445689999996 9999999999999999 99999998 444332211110 111111111 122 2 2
Q ss_pred hCCCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-C-CCeEEEEc
Q 028043 149 FEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-LKRIVLVS 201 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~-~~~iV~vS 201 (214)
+.+.|+||..||....|.+ .-.+.+..|..-...+.+++.+ . ...++.+|
T Consensus 76 ~~~aDvVIiaag~p~kpg~---~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvs 127 (315)
T 3tl2_A 76 TADSDVVVITAGIARKPGM---SRDDLVATNSKIMKSITRDIAKHSPNAIIVVLT 127 (315)
T ss_dssp GTTCSEEEECCSCCCCTTC---CHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred hCCCCEEEEeCCCCCCCCC---CHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECC
Confidence 5789999999997643321 2234567788888888887732 2 34555555
|
| >1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A | Back alignment and structure |
|---|
Probab=97.83 E-value=1.4e-05 Score=67.45 Aligned_cols=72 Identities=18% Similarity=0.200 Sum_probs=60.8
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
.++++|.|+ |.+|+.++++|.+.|+ |+++++++++.+ +.+ .++.++.+|.+|++.++++-..+.|.++.+.+
T Consensus 115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~----~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~ 186 (336)
T 1lnq_A 115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VLR----SGANFVHGDPTRVSDLEKANVRGARAVIVDLE 186 (336)
T ss_dssp -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH----TTCEEEESCTTSHHHHHHTCSTTEEEEEECCS
T ss_pred cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh----CCcEEEEeCCCCHHHHHhcChhhccEEEEcCC
Confidence 468999995 9999999999999999 999999998887 542 45789999999999998754678899987764
|
| >1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 | Back alignment and structure |
|---|
Probab=97.82 E-value=3.6e-05 Score=66.80 Aligned_cols=73 Identities=25% Similarity=0.258 Sum_probs=54.8
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
+.+++|+|.|+ |+||+.+++.|...|+ +|++++|++++.+++.+.+. ... .+ .+++.+ .+.+.|+||++
T Consensus 165 l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g---~~~--~~---~~~l~~-~l~~aDvVi~a 234 (404)
T 1gpj_A 165 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG---GEA--VR---FDELVD-HLARSDVVVSA 234 (404)
T ss_dssp CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT---CEE--CC---GGGHHH-HHHTCSEEEEC
T ss_pred ccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcC---Cce--ec---HHhHHH-HhcCCCEEEEc
Confidence 46899999997 9999999999999999 89999999988766554442 221 12 233443 34679999999
Q ss_pred cCCC
Q 028043 159 TGTT 162 (214)
Q Consensus 159 Ag~~ 162 (214)
.|..
T Consensus 235 t~~~ 238 (404)
T 1gpj_A 235 TAAP 238 (404)
T ss_dssp CSSS
T ss_pred cCCC
Confidence 8643
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.79 E-value=7.8e-05 Score=63.68 Aligned_cols=76 Identities=16% Similarity=0.221 Sum_probs=53.1
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh-hCCCcEEEecc
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-FEGVTHVICCT 159 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~-~~~~d~li~~A 159 (214)
.+++|+|+||+|+||...++.+...|++|++++ ++++.+.+. ++. .. ...|..+.+..++.. .+++|++|+++
T Consensus 183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~-~lG-a~---~v~~~~~~~~~~~~~~~~g~D~vid~~ 256 (375)
T 2vn8_A 183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVR-KLG-AD---DVIDYKSGSVEEQLKSLKPFDFILDNV 256 (375)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHH-HTT-CS---EEEETTSSCHHHHHHTSCCBSEEEESS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHH-HcC-CC---EEEECCchHHHHHHhhcCCCCEEEECC
Confidence 578999999999999999999989999999888 455655443 332 11 123555433222211 24799999999
Q ss_pred CCC
Q 028043 160 GTT 162 (214)
Q Consensus 160 g~~ 162 (214)
|..
T Consensus 257 g~~ 259 (375)
T 2vn8_A 257 GGS 259 (375)
T ss_dssp CTT
T ss_pred CCh
Confidence 865
|
| >3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A* | Back alignment and structure |
|---|
Probab=97.79 E-value=0.00022 Score=60.14 Aligned_cols=111 Identities=9% Similarity=0.075 Sum_probs=69.8
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccC------CCCEEEEEecCCChhccchhhhCCC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQD------EETLQVCKGDTRNPKDLDPAIFEGV 152 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~------~~~~~~v~~Di~d~~~v~~~~~~~~ 152 (214)
+++++|.|+|| |.+|..++..|+..|. +|+++++++++++.....+. .....+... .|. + .+.+.
T Consensus 5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t--~d~---~--a~~~a 76 (324)
T 3gvi_A 5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGA--NDY---A--AIEGA 76 (324)
T ss_dssp -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE--SSG---G--GGTTC
T ss_pred CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEe--CCH---H--HHCCC
Confidence 45679999998 9999999999999998 99999999876542211110 111122111 122 2 25789
Q ss_pred cEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-C-CCeEEEEc
Q 028043 153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-LKRIVLVS 201 (214)
Q Consensus 153 d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~-~~~iV~vS 201 (214)
|+||..||....+.+ .-.+.+..|..-...+++.+.+ . ...++.+|
T Consensus 77 DiVIiaag~p~k~G~---~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvt 124 (324)
T 3gvi_A 77 DVVIVTAGVPRKPGM---SRDDLLGINLKVMEQVGAGIKKYAPEAFVICIT 124 (324)
T ss_dssp SEEEECCSCCCC--------CHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred CEEEEccCcCCCCCC---CHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecC
Confidence 999999997542222 2234567788888888887732 2 24555555
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* | Back alignment and structure |
|---|
Probab=97.77 E-value=6.2e-05 Score=63.95 Aligned_cols=76 Identities=12% Similarity=0.082 Sum_probs=56.7
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
.+.+|+|+|+ |+||...++.+...|++|+++++++++.+.+.+.+.... ..|..+.+.+++ ..+++|++|.++|
T Consensus 180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~----vi~~~~~~~~~~-~~~g~D~vid~~g 253 (357)
T 2cf5_A 180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADD----YVIGSDQAKMSE-LADSLDYVIDTVP 253 (357)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSC----EEETTCHHHHHH-STTTEEEEEECCC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCce----eeccccHHHHHH-hcCCCCEEEECCC
Confidence 4689999995 999999999888899999999999888776653443211 235556555554 2467999999998
Q ss_pred CC
Q 028043 161 TT 162 (214)
Q Consensus 161 ~~ 162 (214)
..
T Consensus 254 ~~ 255 (357)
T 2cf5_A 254 VH 255 (357)
T ss_dssp SC
T ss_pred Ch
Confidence 53
|
| >3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A* | Back alignment and structure |
|---|
Probab=97.77 E-value=4.8e-05 Score=62.51 Aligned_cols=67 Identities=13% Similarity=0.189 Sum_probs=51.8
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccCC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGT 161 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag~ 161 (214)
+|+++|.|+ ||.|++++..|++.|.+|++..|+.++.+++. ++. +... ++. ++ .+.|+|||+...
T Consensus 118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~---~~~~--~~~---~l-----~~~DiVInaTp~ 182 (269)
T 3phh_A 118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLG---CDCF--MEP---PK-----SAFDLIINATSA 182 (269)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHT---CEEE--SSC---CS-----SCCSEEEECCTT
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCC---CeEe--cHH---Hh-----ccCCEEEEcccC
Confidence 789999995 99999999999999999999999999988876 442 2221 222 22 268999998765
Q ss_pred CC
Q 028043 162 TA 163 (214)
Q Consensus 162 ~~ 163 (214)
..
T Consensus 183 Gm 184 (269)
T 3phh_A 183 SL 184 (269)
T ss_dssp CC
T ss_pred CC
Confidence 43
|
| >3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=97.74 E-value=5.2e-05 Score=62.71 Aligned_cols=69 Identities=23% Similarity=0.421 Sum_probs=52.9
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
..+|+++|.|+ ||.|++++..|.+.|+ +|+++.|+.++.+++.+.+ ..+ ++ +++.+ . +.|+|||+
T Consensus 120 ~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~-----~~~--~~---~~l~~--l-~~DivIna 185 (282)
T 3fbt_A 120 IKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEF-----KVI--SY---DELSN--L-KGDVIINC 185 (282)
T ss_dssp CTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTS-----EEE--EH---HHHTT--C-CCSEEEEC
T ss_pred ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhc-----Ccc--cH---HHHHh--c-cCCEEEEC
Confidence 56899999996 7999999999999998 8999999999988876433 221 12 22332 2 68999998
Q ss_pred cCCC
Q 028043 159 TGTT 162 (214)
Q Consensus 159 Ag~~ 162 (214)
....
T Consensus 186 Tp~G 189 (282)
T 3fbt_A 186 TPKG 189 (282)
T ss_dssp SSTT
T ss_pred CccC
Confidence 8653
|
| >1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.74 E-value=4e-05 Score=64.15 Aligned_cols=73 Identities=21% Similarity=0.181 Sum_probs=50.0
Q ss_pred EEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCCh--hccchhhhCCCcEEEeccCC
Q 028043 84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP--KDLDPAIFEGVTHVICCTGT 161 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~--~~v~~~~~~~~d~li~~Ag~ 161 (214)
+|+|+||+|+||...++.+...|++|+++++++++.+.+.+ +. ... ..|..+. +.+++..-+++|++|+++|.
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~-lG-a~~---~i~~~~~~~~~~~~~~~~~~d~vid~~g~ 226 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV-LG-AKE---VLAREDVMAERIRPLDKQRWAAAVDPVGG 226 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH-TT-CSE---EEECC---------CCSCCEEEEEECSTT
T ss_pred eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-cC-CcE---EEecCCcHHHHHHHhcCCcccEEEECCcH
Confidence 79999999999999999998999999999999887766543 22 111 1344443 22222111369999999984
|
| >3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=97.73 E-value=0.00027 Score=59.43 Aligned_cols=110 Identities=11% Similarity=0.108 Sum_probs=70.1
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccC------CCCEEEEEecCCChhccchhhhCCCc
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQD------EETLQVCKGDTRNPKDLDPAIFEGVT 153 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~------~~~~~~v~~Di~d~~~v~~~~~~~~d 153 (214)
++++|.|+| +|.+|..++..|+..|. +|+++++++++++.....+. .....+... .|. + .+.+.|
T Consensus 4 ~~~kI~iiG-aG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t--~d~---~--a~~~aD 75 (321)
T 3p7m_A 4 ARKKITLVG-AGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGT--NDY---K--DLENSD 75 (321)
T ss_dssp CCCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCG---G--GGTTCS
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEc--CCH---H--HHCCCC
Confidence 457899999 59999999999999988 99999999876543221111 112222211 122 2 356899
Q ss_pred EEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-C-CCeEEEEc
Q 028043 154 HVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-LKRIVLVS 201 (214)
Q Consensus 154 ~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~-~~~iV~vS 201 (214)
+||..||....+.+ .-.+.+..|..-...+++.+.+ . ...++.+|
T Consensus 76 vVIi~ag~p~k~G~---~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt 122 (321)
T 3p7m_A 76 VVIVTAGVPRKPGM---SRDDLLGINIKVMQTVGEGIKHNCPNAFVICIT 122 (321)
T ss_dssp EEEECCSCCCCTTC---CHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred EEEEcCCcCCCCCC---CHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEec
Confidence 99999997542221 2233456788888888887732 2 24555554
|
| >1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A* | Back alignment and structure |
|---|
Probab=97.73 E-value=0.00036 Score=58.30 Aligned_cols=109 Identities=17% Similarity=0.125 Sum_probs=67.2
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCC------CCEEEEEecCCChhccchhhhCCCcEE
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDE------ETLQVCKGDTRNPKDLDPAIFEGVTHV 155 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~------~~~~~v~~Di~d~~~v~~~~~~~~d~l 155 (214)
++|.|+|| |.+|..++..|+..|+ +|+++++++++++.....+.. ....+... +| .+ .+.+.|+|
T Consensus 3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d---~~--a~~~aD~V 74 (309)
T 1ur5_A 3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NN---YA--DTANSDVI 74 (309)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SC---GG--GGTTCSEE
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEEC--CC---HH--HHCCCCEE
Confidence 68999998 9999999999999997 899999988766543221111 11111110 22 22 25689999
Q ss_pred EeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CCCeEEEEcc
Q 028043 156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSS 202 (214)
Q Consensus 156 i~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~~~iV~vSS 202 (214)
|..+|....+.. .-.+....|......+.+.+.+ ....+|.+.|
T Consensus 75 i~a~g~p~~~g~---~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t 119 (309)
T 1ur5_A 75 VVTSGAPRKPGM---SREDLIKVNADITRACISQAAPLSPNAVIIMVN 119 (309)
T ss_dssp EECCCC-----------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECC
T ss_pred EEcCCCCCCCCC---CHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcC
Confidence 999997542221 1123456777777888887743 3444554444
|
| >3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* | Back alignment and structure |
|---|
Probab=97.72 E-value=5.9e-05 Score=62.96 Aligned_cols=73 Identities=21% Similarity=0.156 Sum_probs=52.2
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
++ |+|+||+|++|...++.+...|++|+++++++++.+.+.+ +. ... + .|..+.+.+++..-+++|++|.++|
T Consensus 148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~-lG-a~~-v--i~~~~~~~~~~~~~~~~d~v~d~~g 220 (324)
T 3nx4_A 148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKS-LG-ANR-I--LSRDEFAESRPLEKQLWAGAIDTVG 220 (324)
T ss_dssp CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH-HT-CSE-E--EEGGGSSCCCSSCCCCEEEEEESSC
T ss_pred Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cC-CCE-E--EecCCHHHHHhhcCCCccEEEECCC
Confidence 45 9999999999999999999999999999999988776543 22 221 1 2443333333321246899998886
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=97.72 E-value=3e-05 Score=62.91 Aligned_cols=78 Identities=21% Similarity=0.241 Sum_probs=54.9
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcCh-------------------hHHHHHhcccC----CCCEEEEE
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDP-------------------EKATTLFGKQD----EETLQVCK 135 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~-------------------~~~~~~~~~~~----~~~~~~v~ 135 (214)
+++++|+|.| .||+|+++++.|+..|. +|++++++. .+.+.+.+.+. ...++.+.
T Consensus 29 l~~~~VlVvG-~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~ 107 (249)
T 1jw9_B 29 LKDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVN 107 (249)
T ss_dssp HHHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred HhCCeEEEEe-eCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEe
Confidence 3467999999 58999999999999997 799999986 55554433332 22344555
Q ss_pred ecCCChhccchhhhCCCcEEEeccC
Q 028043 136 GDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 136 ~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
.++++ +.+.+ .+.+.|+||.+..
T Consensus 108 ~~~~~-~~~~~-~~~~~DvVi~~~d 130 (249)
T 1jw9_B 108 ALLDD-AELAA-LIAEHDLVLDCTD 130 (249)
T ss_dssp SCCCH-HHHHH-HHHTSSEEEECCS
T ss_pred ccCCH-hHHHH-HHhCCCEEEEeCC
Confidence 55653 34443 3678999998764
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A | Back alignment and structure |
|---|
Probab=97.71 E-value=8.9e-05 Score=65.12 Aligned_cols=43 Identities=26% Similarity=0.361 Sum_probs=38.9
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHh
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF 123 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~ 123 (214)
.|++|+|+||+|+||...++.+...|++|+++++++++++.+.
T Consensus 228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~ 270 (456)
T 3krt_A 228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICR 270 (456)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHH
Confidence 5789999999999999999999999999999999998877654
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=97.69 E-value=7.8e-05 Score=62.99 Aligned_cols=70 Identities=20% Similarity=0.279 Sum_probs=53.2
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
.+++|+|+|+ |+||...++.+...|++|+++++++++.+.+.+ +. ... ++ .+.+.+++ ++|++|.++|
T Consensus 176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-lG-a~~-v~----~~~~~~~~----~~D~vid~~g 243 (348)
T 3two_A 176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDALS-MG-VKH-FY----TDPKQCKE----ELDFIISTIP 243 (348)
T ss_dssp TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHH-TT-CSE-EE----SSGGGCCS----CEEEEEECCC
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHh-cC-CCe-ec----CCHHHHhc----CCCEEEECCC
Confidence 5789999997 999999999998999999999999988776543 32 221 22 45555543 7999999988
Q ss_pred CC
Q 028043 161 TT 162 (214)
Q Consensus 161 ~~ 162 (214)
..
T Consensus 244 ~~ 245 (348)
T 3two_A 244 TH 245 (348)
T ss_dssp SC
T ss_pred cH
Confidence 64
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=97.68 E-value=3.3e-05 Score=63.74 Aligned_cols=71 Identities=13% Similarity=0.128 Sum_probs=51.5
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
+.+|+++|+|+ ||+|++++..|++.|+ +|++..|+.++.+++.. .+... ..+++.+ ...+.|+|||+
T Consensus 115 l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~-----~~~~~-----~~~~~~~-~~~~aDiVIna 182 (277)
T 3don_A 115 IEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWSL-----NINKI-----NLSHAES-HLDEFDIIINT 182 (277)
T ss_dssp GGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCS-----CCEEE-----CHHHHHH-TGGGCSEEEEC
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH-----hcccc-----cHhhHHH-HhcCCCEEEEC
Confidence 46789999996 8999999999999999 89999999988766542 12211 1233333 24578999998
Q ss_pred cCCC
Q 028043 159 TGTT 162 (214)
Q Consensus 159 Ag~~ 162 (214)
....
T Consensus 183 Tp~G 186 (277)
T 3don_A 183 TPAG 186 (277)
T ss_dssp CC--
T ss_pred ccCC
Confidence 7653
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.68 E-value=0.00021 Score=60.48 Aligned_cols=75 Identities=17% Similarity=0.145 Sum_probs=53.2
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCC-hh---ccchhhh----CCC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN-PK---DLDPAIF----EGV 152 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d-~~---~v~~~~~----~~~ 152 (214)
.+++|+|+|+ |+||...++.+...|++|+++++++++.+.+.+ +. .. ...|..+ .+ .+.+..- +++
T Consensus 168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-lG-a~---~~~~~~~~~~~~~~i~~~~~~~~g~g~ 241 (352)
T 1e3j_A 168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN-CG-AD---VTLVVDPAKEEESSIIERIRSAIGDLP 241 (352)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-TT-CS---EEEECCTTTSCHHHHHHHHHHHSSSCC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH-hC-CC---EEEcCcccccHHHHHHHHhccccCCCC
Confidence 4689999997 999999999888899999999999988776543 22 22 2235553 22 2222111 369
Q ss_pred cEEEeccCC
Q 028043 153 THVICCTGT 161 (214)
Q Consensus 153 d~li~~Ag~ 161 (214)
|++|+++|.
T Consensus 242 D~vid~~g~ 250 (352)
T 1e3j_A 242 NVTIDCSGN 250 (352)
T ss_dssp SEEEECSCC
T ss_pred CEEEECCCC
Confidence 999999984
|
| >2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A | Back alignment and structure |
|---|
Probab=97.67 E-value=8.9e-05 Score=60.88 Aligned_cols=72 Identities=28% Similarity=0.349 Sum_probs=54.4
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEecc
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~A 159 (214)
+.+|+++|.|+ |++|+++++.|.+.|++|++.+|++++.+++.+.+ ++. +.+ ++.+ ...+.|+||++.
T Consensus 127 ~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~---g~~-----~~~--~~~~-~~~~aDiVi~at 194 (275)
T 2hk9_A 127 VKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKF---PLE-----VVN--SPEE-VIDKVQVIVNTT 194 (275)
T ss_dssp GGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTS---CEE-----ECS--CGGG-TGGGCSEEEECS
T ss_pred cCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHc---CCe-----eeh--hHHh-hhcCCCEEEEeC
Confidence 46789999995 89999999999999999999999998888775443 222 111 2332 245789999998
Q ss_pred CCCC
Q 028043 160 GTTA 163 (214)
Q Consensus 160 g~~~ 163 (214)
....
T Consensus 195 p~~~ 198 (275)
T 2hk9_A 195 SVGL 198 (275)
T ss_dssp STTS
T ss_pred CCCC
Confidence 7654
|
| >3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1 | Back alignment and structure |
|---|
Probab=97.66 E-value=0.00015 Score=61.28 Aligned_cols=110 Identities=15% Similarity=0.113 Sum_probs=71.4
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC--eEEEEEcChhHHHHHhcccC-----CCCEEEEEecCCChhccchhhhCCCc
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQD-----EETLQVCKGDTRNPKDLDPAIFEGVT 153 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~~~v~~Di~d~~~v~~~~~~~~d 153 (214)
..++|.|+|+ |.+|..++..|+..|. +|+++++++++++.....+. ......... +| .+. +.+.|
T Consensus 20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t--~d---~~~--~~daD 91 (330)
T 3ldh_A 20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSG--KD---YSV--SAGSK 91 (330)
T ss_dssp CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEE--SS---SCS--CSSCS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEc--CC---HHH--hCCCC
Confidence 4578999998 9999999999999987 89999999876554221111 111122211 12 222 46799
Q ss_pred EEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-C-CCeEEEEc
Q 028043 154 HVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-LKRIVLVS 201 (214)
Q Consensus 154 ~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~-~~~iV~vS 201 (214)
++|-.||....|.+ .-.+.+..|..-...+.+.+.+ . ...++.+|
T Consensus 92 iVIitaG~p~kpG~---tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvt 138 (330)
T 3ldh_A 92 LVVITAGARQQEGE---SRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHP 138 (330)
T ss_dssp EEEECCSCCCCSSC---CTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred EEEEeCCCCCCCCC---CHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCC
Confidence 99999998653322 2234567888888888877632 2 34455555
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00016 Score=61.83 Aligned_cols=75 Identities=13% Similarity=0.164 Sum_probs=56.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
.+.+|+|+|+ |+||...++.+...|++|+++++++++.+.+.+ +. .. ...|..+.+.+++ +.+++|++|.++|
T Consensus 194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~-lG-a~---~vi~~~~~~~~~~-~~~g~Dvvid~~g 266 (369)
T 1uuf_A 194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA-LG-AD---EVVNSRNADEMAA-HLKSFDFILNTVA 266 (369)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-HT-CS---EEEETTCHHHHHT-TTTCEEEEEECCS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cC-Cc---EEeccccHHHHHH-hhcCCCEEEECCC
Confidence 4689999997 889999999888899999999999988776543 32 11 1246666554443 2367999999998
Q ss_pred CC
Q 028043 161 TT 162 (214)
Q Consensus 161 ~~ 162 (214)
..
T Consensus 267 ~~ 268 (369)
T 1uuf_A 267 AP 268 (369)
T ss_dssp SC
T ss_pred CH
Confidence 53
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=97.65 E-value=7.9e-05 Score=58.29 Aligned_cols=73 Identities=15% Similarity=0.100 Sum_probs=50.1
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
|+|+|+||+|.+|+++++.|++.|++|++++|++++.+.+.+.... .+. ..|+. .+++.+ .+.++|+||++..
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~--~~~~~-~~~~~~-~~~~~D~Vi~~~~ 73 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRR-IAG--DASIT-GMKNED-AAEACDIAVLTIP 73 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHH-HHS--SCCEE-EEEHHH-HHHHCSEEEECSC
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc-ccc--cCCCC-hhhHHH-HHhcCCEEEEeCC
Confidence 4799999999999999999999999999999998877665432110 000 01121 122333 2456899998875
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=97.64 E-value=9.5e-05 Score=62.46 Aligned_cols=75 Identities=17% Similarity=0.127 Sum_probs=53.4
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccch--hhh--CCCcEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDP--AIF--EGVTHV 155 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~--~~~--~~~d~l 155 (214)
.+++|+|+|| |+||..+++.+...|+ +|+++++++++.+.+.+ +. .. ...|..+.+..++ ... .++|++
T Consensus 167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~-~G-a~---~~~~~~~~~~~~~v~~~~~g~g~D~v 240 (348)
T 2d8a_A 167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKK-VG-AD---YVINPFEEDVVKEVMDITDGNGVDVF 240 (348)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHH-HT-CS---EEECTTTSCHHHHHHHHTTTSCEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-hC-CC---EEECCCCcCHHHHHHHHcCCCCCCEE
Confidence 5789999999 9999999999999999 89999999888766542 22 11 1245554322221 112 269999
Q ss_pred EeccCC
Q 028043 156 ICCTGT 161 (214)
Q Consensus 156 i~~Ag~ 161 (214)
|+++|.
T Consensus 241 id~~g~ 246 (348)
T 2d8a_A 241 LEFSGA 246 (348)
T ss_dssp EECSCC
T ss_pred EECCCC
Confidence 999984
|
| >1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A* | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00055 Score=56.87 Aligned_cols=108 Identities=12% Similarity=0.126 Sum_probs=69.8
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCC--eEEEEEcChhHHHHH----hccc--CCCCEEEEEecCCChhccchhhhCCCcE
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTL----FGKQ--DEETLQVCKGDTRNPKDLDPAIFEGVTH 154 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~----~~~~--~~~~~~~v~~Di~d~~~v~~~~~~~~d~ 154 (214)
|+|.|+|| |.+|..++..|+..|. +|++.++++++++.. .+.. -.....+... +| .+ .+.+.|+
T Consensus 1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d----~~-a~~~aDi 72 (294)
T 1oju_A 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--AD----YS-LLKGSEI 72 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SC----GG-GGTTCSE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CC----HH-HhCCCCE
Confidence 57999998 9999999999999998 899999999876421 1111 0112222211 12 22 3567999
Q ss_pred EEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-C-CCeEEEEc
Q 028043 155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-LKRIVLVS 201 (214)
Q Consensus 155 li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~-~~~iV~vS 201 (214)
+|..||....+.+ .-.+.+..|..-...+.+.+.+ . ...++.+|
T Consensus 73 VViaag~~~kpG~---~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvs 118 (294)
T 1oju_A 73 IVVTAGLARKPGM---TRLDLAHKNAGIIKDIAKKIVENAPESKILVVT 118 (294)
T ss_dssp EEECCCCCCCSSC---CHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred EEECCCCCCCCCC---cHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC
Confidence 9999997542221 2234567788778888887743 2 34555555
|
| >1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* | Back alignment and structure |
|---|
Probab=97.63 E-value=4.1e-05 Score=64.19 Aligned_cols=73 Identities=23% Similarity=0.214 Sum_probs=50.6
Q ss_pred EEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCCh--hccchhhhCCCcEEEeccCC
Q 028043 84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP--KDLDPAIFEGVTHVICCTGT 161 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~--~~v~~~~~~~~d~li~~Ag~ 161 (214)
+|+|+||+|+||...++.+...|++|+++++++++.+.+.+ +. .. .+ .|..+. +.+++..-+++|++|+++|.
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~-lG-a~-~v--~~~~~~~~~~~~~~~~~~~d~vid~~g~ 227 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQ-LG-AS-EV--ISREDVYDGTLKALSKQQWQGAVDPVGG 227 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHH-HT-CS-EE--EEHHHHCSSCCCSSCCCCEEEEEESCCT
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cC-Cc-EE--EECCCchHHHHHHhhcCCccEEEECCcH
Confidence 79999999999999999998899999999998877665543 32 11 11 233222 22222111368999999984
|
| >1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.62 E-value=0.00015 Score=61.51 Aligned_cols=76 Identities=21% Similarity=0.172 Sum_probs=54.2
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHC-CCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCCh--hccchhhhC-CCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP--KDLDPAIFE-GVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~--~~v~~~~~~-~~d~li 156 (214)
.+++|+|+|| |+||...++.+... |++|+++++++++.+.+.+ +. .. ...|..+. +.+++..-+ ++|++|
T Consensus 186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~-lG-a~---~vi~~~~~~~~~v~~~~~g~g~Dvvi 259 (359)
T 1h2b_A 186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER-LG-AD---HVVDARRDPVKQVMELTRGRGVNVAM 259 (359)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH-TT-CS---EEEETTSCHHHHHHHHTTTCCEEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH-hC-CC---EEEeccchHHHHHHHHhCCCCCcEEE
Confidence 4689999999 89999999988888 9999999999988776543 32 11 12455543 333332113 699999
Q ss_pred eccCCC
Q 028043 157 CCTGTT 162 (214)
Q Consensus 157 ~~Ag~~ 162 (214)
.++|..
T Consensus 260 d~~G~~ 265 (359)
T 1h2b_A 260 DFVGSQ 265 (359)
T ss_dssp ESSCCH
T ss_pred ECCCCc
Confidence 999854
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A | Back alignment and structure |
|---|
Probab=97.62 E-value=9e-05 Score=62.95 Aligned_cols=74 Identities=15% Similarity=0.206 Sum_probs=53.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCCh-hccchhhhCCCcEEEecc
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP-KDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~-~~v~~~~~~~~d~li~~A 159 (214)
.+++|+|+|| |+||...++.+...|++|+++++++++.+.+.+ +. .. . ..|..+. +..++ +.+++|++|.++
T Consensus 179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~-lG-a~-~--v~~~~~~~~~~~~-~~~~~D~vid~~ 251 (360)
T 1piw_A 179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK-MG-AD-H--YIATLEEGDWGEK-YFDTFDLIVVCA 251 (360)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-HT-CS-E--EEEGGGTSCHHHH-SCSCEEEEEECC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-cC-CC-E--EEcCcCchHHHHH-hhcCCCEEEECC
Confidence 4789999999 999999999888899999999998887766543 22 11 1 2344443 22222 235799999999
Q ss_pred CC
Q 028043 160 GT 161 (214)
Q Consensus 160 g~ 161 (214)
|.
T Consensus 252 g~ 253 (360)
T 1piw_A 252 SS 253 (360)
T ss_dssp SC
T ss_pred CC
Confidence 86
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=97.61 E-value=0.00023 Score=60.40 Aligned_cols=78 Identities=15% Similarity=0.145 Sum_probs=55.4
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCe-EEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh---h--CCCcE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI---F--EGVTH 154 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~---~--~~~d~ 154 (214)
.|++|+|+|| |++|...++.+...|++ |+++++++++.+.+.+. ...+.....|-.+.+++.+.+ . .++|+
T Consensus 179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l--~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dv 255 (363)
T 3m6i_A 179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI--CPEVVTHKVERLSAEESAKKIVESFGGIEPAV 255 (363)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH--CTTCEEEECCSCCHHHHHHHHHHHTSSCCCSE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh--chhcccccccccchHHHHHHHHHHhCCCCCCE
Confidence 4688999998 99999999988889997 99999999888765543 223333334433334333322 2 26999
Q ss_pred EEeccCC
Q 028043 155 VICCTGT 161 (214)
Q Consensus 155 li~~Ag~ 161 (214)
+|.++|.
T Consensus 256 vid~~g~ 262 (363)
T 3m6i_A 256 ALECTGV 262 (363)
T ss_dssp EEECSCC
T ss_pred EEECCCC
Confidence 9999984
|
| >3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00017 Score=61.34 Aligned_cols=73 Identities=19% Similarity=0.243 Sum_probs=52.9
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh---hC--CCcEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI---FE--GVTHV 155 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~---~~--~~d~l 155 (214)
.+++|+|+| +|+||...++.+...|++|+++++++++.+.+.+ +. .. ...| .+.+++.+.+ .+ ++|++
T Consensus 189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-lG-a~---~vi~-~~~~~~~~~v~~~~~g~g~D~v 261 (363)
T 3uog_A 189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRAFA-LG-AD---HGIN-RLEEDWVERVYALTGDRGADHI 261 (363)
T ss_dssp TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-HT-CS---EEEE-TTTSCHHHHHHHHHTTCCEEEE
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHH-cC-CC---EEEc-CCcccHHHHHHHHhCCCCceEE
Confidence 578999999 8999999999999999999999999988776543 32 11 1234 3333332211 22 79999
Q ss_pred EeccC
Q 028043 156 ICCTG 160 (214)
Q Consensus 156 i~~Ag 160 (214)
|.++|
T Consensus 262 id~~g 266 (363)
T 3uog_A 262 LEIAG 266 (363)
T ss_dssp EEETT
T ss_pred EECCC
Confidence 99998
|
| >1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* | Back alignment and structure |
|---|
Probab=97.60 E-value=0.0012 Score=55.66 Aligned_cols=103 Identities=16% Similarity=0.134 Sum_probs=65.1
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhccc-------C-CCCEEEEEecCCChhccchhhhC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQ-------D-EETLQVCKGDTRNPKDLDPAIFE 150 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~-------~-~~~~~~v~~Di~d~~~v~~~~~~ 150 (214)
.+.++|.|.|| |.+|..++..|+..|+ +|++.++++++++.....+ . ..++.. . +| +++ .+.
T Consensus 7 ~~~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t---~d---~~e-a~~ 77 (331)
T 1pzg_A 7 QRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-E---YS---YEA-ALT 77 (331)
T ss_dssp SCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-E---CS---HHH-HHT
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE-e---CC---HHH-HhC
Confidence 34578999997 9999999999999998 9999999987665521111 1 111211 0 22 332 257
Q ss_pred CCcEEEeccCCCCCCCCCCC--CCCchhHHHHHHHHHHHHHhc
Q 028043 151 GVTHVICCTGTTAFPSRRWD--GDNTPEKVDWEGVRNLVSALP 191 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~~~~~--~~~~~~~vNv~g~~~l~~a~~ 191 (214)
+.|+||..+|....+..+.. .-......|..-...+.+.+.
T Consensus 78 ~aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~ 120 (331)
T 1pzg_A 78 GADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIK 120 (331)
T ss_dssp TCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 89999999987542221000 122334567777777777663
|
| >3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber} | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00049 Score=57.68 Aligned_cols=108 Identities=16% Similarity=0.102 Sum_probs=67.8
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCC--eEEEEEcChhHHHHHhcccC------CCCEEEEEecCCChhccchhhhCCCcE
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQD------EETLQVCKGDTRNPKDLDPAIFEGVTH 154 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~------~~~~~~v~~Di~d~~~v~~~~~~~~d~ 154 (214)
|+|.|+|+ |.+|..++..|+..|. +|+++++++++++....++. .....+...| +. + .+.+.|+
T Consensus 1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~~---~--a~~~aDv 72 (314)
T 3nep_X 1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--DY---G--PTEDSDV 72 (314)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--SS---G--GGTTCSE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--CH---H--HhCCCCE
Confidence 57999996 9999999999999887 89999999876543211111 1122222121 11 2 2568999
Q ss_pred EEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-C-CCeEEEEc
Q 028043 155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-LKRIVLVS 201 (214)
Q Consensus 155 li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~-~~~iV~vS 201 (214)
+|..||....|.+ .-.+.+..|..-...+.+++.+ . ...++.+|
T Consensus 73 Vii~ag~~~kpG~---~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt 118 (314)
T 3nep_X 73 CIITAGLPRSPGM---SRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVA 118 (314)
T ss_dssp EEECCCC----------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECC
T ss_pred EEECCCCCCCCCC---CHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecC
Confidence 9999997643321 2234567788888888888743 2 23555554
|
| >1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00014 Score=61.11 Aligned_cols=98 Identities=13% Similarity=0.090 Sum_probs=60.4
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCC--eEEEEEcChhHHHHHhcccCC-----CCEEEEEecCCChhccchhhhCCCcE
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDE-----ETLQVCKGDTRNPKDLDPAIFEGVTH 154 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~-----~~~~~v~~Di~d~~~v~~~~~~~~d~ 154 (214)
.++|.|+|| |.+|..++..|+..|. +|+++|+++++++.....+.. ..+.+. . .+ .+ .+.+.|+
T Consensus 7 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~--~~----~~-a~~~aDv 77 (318)
T 1y6j_A 7 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY-A--GD----YS-DVKDCDV 77 (318)
T ss_dssp CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----C----GG-GGTTCSE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEE-E--CC----HH-HhCCCCE
Confidence 468999998 9999999999999987 899999987664432222211 122222 1 12 22 2678999
Q ss_pred EEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc
Q 028043 155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP 191 (214)
Q Consensus 155 li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~ 191 (214)
+|..+|....+.. .-.+....|+.....+++.+.
T Consensus 78 Vii~~g~p~k~g~---~r~dl~~~n~~i~~~i~~~i~ 111 (318)
T 1y6j_A 78 IVVTAGANRKPGE---TRLDLAKKNVMIAKEVTQNIM 111 (318)
T ss_dssp EEECCCC---------CHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEcCCCCCCCCc---CHHHHHHhhHHHHHHHHHHHH
Confidence 9999997542211 112345677777788888774
|
| >2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00023 Score=59.32 Aligned_cols=97 Identities=21% Similarity=0.173 Sum_probs=60.4
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCC--eEEEEEcChhHHHHHhcccCC-----CCEEEEEecCCChhccchhhhCCCcEE
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDE-----ETLQVCKGDTRNPKDLDPAIFEGVTHV 155 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~-----~~~~~v~~Di~d~~~v~~~~~~~~d~l 155 (214)
|+|.|.|| |.+|..++..|+..|+ +|+++++++++++.....+.. ....+. . .+. + .+.+.|+|
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~-~--~~~---~--a~~~aDvV 71 (304)
T 2v6b_A 1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVW-H--GGH---S--ELADAQVV 71 (304)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEE-E--ECG---G--GGTTCSEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEE-E--CCH---H--HhCCCCEE
Confidence 47999998 9999999999999999 999999998766543222211 112222 1 122 2 25689999
Q ss_pred EeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc
Q 028043 156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP 191 (214)
Q Consensus 156 i~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~ 191 (214)
|.++|....+.+ .-.+....|..-...+++.+.
T Consensus 72 Ii~~~~~~~~g~---~r~dl~~~n~~i~~~i~~~i~ 104 (304)
T 2v6b_A 72 ILTAGANQKPGE---SRLDLLEKNADIFRELVPQIT 104 (304)
T ss_dssp EECC---------------CHHHHHHHHHHHHHHHH
T ss_pred EEcCCCCCCCCC---cHHHHHHhHHHHHHHHHHHHH
Confidence 999986542221 122345778877777777664
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00018 Score=60.57 Aligned_cols=74 Identities=15% Similarity=0.142 Sum_probs=53.2
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChh---ccchhhhCCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK---DLDPAIFEGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~---~v~~~~~~~~d~li 156 (214)
.+++|+|+|| |+||...++.+...|+ +|+++++++++.+.+.+. .. ...|..+.+ .+.+..-+++|++|
T Consensus 164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l--a~----~v~~~~~~~~~~~~~~~~~~g~D~vi 236 (343)
T 2dq4_A 164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY--AD----RLVNPLEEDLLEVVRRVTGSGVEVLL 236 (343)
T ss_dssp TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT--CS----EEECTTTSCHHHHHHHHHSSCEEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh--HH----hccCcCccCHHHHHHHhcCCCCCEEE
Confidence 5789999999 9999999999888999 899999999887655432 11 124555432 12221113699999
Q ss_pred eccCC
Q 028043 157 CCTGT 161 (214)
Q Consensus 157 ~~Ag~ 161 (214)
.++|.
T Consensus 237 d~~g~ 241 (343)
T 2dq4_A 237 EFSGN 241 (343)
T ss_dssp ECSCC
T ss_pred ECCCC
Confidence 99984
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.54 E-value=0.0003 Score=58.34 Aligned_cols=73 Identities=12% Similarity=0.115 Sum_probs=53.9
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
..+.+|+++|.|+ |.||+++++.|...|++|++.+|++++.+.+.+ . ++..+ + .+++++ ++.+.|+|++
T Consensus 153 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~-~---g~~~~--~---~~~l~~-~l~~aDvVi~ 221 (300)
T 2rir_A 153 YTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARITE-M---GLVPF--H---TDELKE-HVKDIDICIN 221 (300)
T ss_dssp SCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-T---TCEEE--E---GGGHHH-HSTTCSEEEE
T ss_pred CCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-C---CCeEE--c---hhhHHH-HhhCCCEEEE
Confidence 3567899999995 999999999999999999999999877655432 1 22222 1 233443 3567899998
Q ss_pred ccCC
Q 028043 158 CTGT 161 (214)
Q Consensus 158 ~Ag~ 161 (214)
+...
T Consensus 222 ~~p~ 225 (300)
T 2rir_A 222 TIPS 225 (300)
T ss_dssp CCSS
T ss_pred CCCh
Confidence 8864
|
| >3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00012 Score=59.49 Aligned_cols=70 Identities=21% Similarity=0.292 Sum_probs=52.1
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
..+ +++|.|+ ||.|++++..|++.|+ +|++.+|++++.+++.+.+ ... + .+++.+ ...+.|+|||+
T Consensus 107 ~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~-----~~~--~---~~~~~~-~~~~aDiVIna 173 (253)
T 3u62_A 107 VKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPV-----KIF--S---LDQLDE-VVKKAKSLFNT 173 (253)
T ss_dssp CCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSC-----EEE--E---GGGHHH-HHHTCSEEEEC
T ss_pred CCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc-----ccC--C---HHHHHh-hhcCCCEEEEC
Confidence 356 8999995 9999999999999998 8999999999888765432 111 1 223333 24679999998
Q ss_pred cCCC
Q 028043 159 TGTT 162 (214)
Q Consensus 159 Ag~~ 162 (214)
....
T Consensus 174 tp~g 177 (253)
T 3u62_A 174 TSVG 177 (253)
T ss_dssp SSTT
T ss_pred CCCC
Confidence 7543
|
| >3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A* | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00035 Score=58.59 Aligned_cols=110 Identities=23% Similarity=0.257 Sum_probs=68.0
Q ss_pred CEEEEEcCchHHHHHHHHHHHHC-C--CeEEEEEcChh-H--HHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEE
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSR-N--IKSRLLLRDPE-K--ATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVI 156 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~-G--~~V~~~~r~~~-~--~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li 156 (214)
|+|.|+||+|.||+.++..|+.. + .+++++++++. . ..++.+. .....+... .+ +...+ .+.+.|++|
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~~~~G~a~Dl~~~--~~~~~v~~~-~~--~~~~~-~~~~aDivi 74 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHI--PTAVKIKGF-SG--EDATP-ALEGADVVL 74 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTTHHHHHHHHHTS--CSSEEEEEE-CS--SCCHH-HHTTCSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCCCchhHHHHhhCC--CCCceEEEe-cC--CCcHH-HhCCCCEEE
Confidence 57999999999999999999875 4 47999999861 1 1122211 112222211 11 11122 367899999
Q ss_pred eccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-C-CCeEEEEc
Q 028043 157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-LKRIVLVS 201 (214)
Q Consensus 157 ~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~-~~~iV~vS 201 (214)
..||....|. +.-.+.++.|..-...+.+++.+ . ...++.+|
T Consensus 75 i~ag~~rkpG---~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvt 118 (312)
T 3hhp_A 75 ISAGVARKPG---MDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT 118 (312)
T ss_dssp ECCSCSCCTT---CCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred EeCCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEec
Confidence 9999754322 12244567788888888887732 2 34566554
|
| >2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00026 Score=55.85 Aligned_cols=65 Identities=18% Similarity=0.235 Sum_probs=47.5
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
+++|.|.| +|.+|+.+++.|++.|++|++.+|++++.+.+.+. ++... +..+ .+.++|+||.+..
T Consensus 28 ~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~----g~~~~--------~~~~-~~~~~DvVi~av~ 92 (215)
T 2vns_A 28 APKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPS----AAQVT--------FQEE-AVSSPEVIFVAVF 92 (215)
T ss_dssp -CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBT----TSEEE--------EHHH-HTTSCSEEEECSC
T ss_pred CCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----CCcee--------cHHH-HHhCCCEEEECCC
Confidence 46799999 89999999999999999999999999887765432 23221 1222 2456788887765
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00014 Score=60.69 Aligned_cols=74 Identities=18% Similarity=0.154 Sum_probs=52.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
.+++|+|+||+|+||...++.+...|++|++++++ ++.+. .+++.. . ...|..+.+.+.+. ..++|++|.++|
T Consensus 152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~-~~~~~-~~~lGa-~---~~i~~~~~~~~~~~-~~g~D~v~d~~g 224 (321)
T 3tqh_A 152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASK-RNHAF-LKALGA-E---QCINYHEEDFLLAI-STPVDAVIDLVG 224 (321)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECH-HHHHH-HHHHTC-S---EEEETTTSCHHHHC-CSCEEEEEESSC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEecc-chHHH-HHHcCC-C---EEEeCCCcchhhhh-ccCCCEEEECCC
Confidence 57899999999999999999999999999988854 34433 333321 1 12455554423332 468999999988
Q ss_pred C
Q 028043 161 T 161 (214)
Q Consensus 161 ~ 161 (214)
.
T Consensus 225 ~ 225 (321)
T 3tqh_A 225 G 225 (321)
T ss_dssp H
T ss_pred c
Confidence 4
|
| >4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A* | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00023 Score=64.04 Aligned_cols=73 Identities=18% Similarity=0.215 Sum_probs=61.8
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
..++++|.| .|-+|+.++++|.+.|++|++++.+++..+++.+. .++.++.+|.++++.++++-..+.|.+|-
T Consensus 126 ~~~hviI~G-~g~~g~~la~~L~~~~~~vvvid~~~~~~~~~~~~---~~~~~i~Gd~~~~~~L~~a~i~~a~~vi~ 198 (565)
T 4gx0_A 126 TRGHILIFG-IDPITRTLIRKLESRNHLFVVVTDNYDQALHLEEQ---EGFKVVYGSPTDAHVLAGLRVAAARSIIA 198 (565)
T ss_dssp CCSCEEEES-CCHHHHHHHHHTTTTTCCEEEEESCHHHHHHHHHS---CSSEEEESCTTCHHHHHHTTGGGCSEEEE
T ss_pred cCCeEEEEC-CChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHh---cCCeEEEeCCCCHHHHHhcCcccCCEEEE
Confidence 346799999 57899999999999999999999999988776532 15789999999999999865678898885
|
| >4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major} | Back alignment and structure |
|---|
Probab=97.50 E-value=0.0014 Score=55.72 Aligned_cols=113 Identities=19% Similarity=0.198 Sum_probs=70.7
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC-------eEEEEEcChh--HHHHHhcc---cCCCC-EEEEEecCCChhccch
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-------KSRLLLRDPE--KATTLFGK---QDEET-LQVCKGDTRNPKDLDP 146 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~-------~V~~~~r~~~--~~~~~~~~---~~~~~-~~~v~~Di~d~~~v~~ 146 (214)
+..-+|.|+||+|+||+.++..|+.... ++.+++.++. .++-..-+ ..-+. ...+..+ | ...
T Consensus 22 ~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~--~---~~~ 96 (345)
T 4h7p_A 22 MSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTA--D---PRV 96 (345)
T ss_dssp CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEES--C---HHH
T ss_pred CCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcC--C---hHH
Confidence 4456999999999999999999987643 6888888653 22221111 11111 1222221 1 122
Q ss_pred hhhCCCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc--CC-CeEEEEc
Q 028043 147 AIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS--SL-KRIVLVS 201 (214)
Q Consensus 147 ~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~--~~-~~iV~vS 201 (214)
.+.+.|++|-.||...-|.+ .-.+.++.|..-...+.+++.+ .. .+|+.+|
T Consensus 97 -a~~~advVvi~aG~prkpGm---tR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvs 150 (345)
T 4h7p_A 97 -AFDGVAIAIMCGAFPRKAGM---ERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVG 150 (345)
T ss_dssp -HTTTCSEEEECCCCCCCTTC---CHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred -HhCCCCEEEECCCCCCCCCC---CHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeC
Confidence 36789999999998653332 2345678898888888888743 22 3455555
|
| >3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A* | Back alignment and structure |
|---|
Probab=97.49 E-value=0.0011 Score=55.56 Aligned_cols=108 Identities=17% Similarity=0.224 Sum_probs=67.4
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC--eEEEEEcChhHHHHHhccc------CCCCEEEEEecCCChhccchhhhCCC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQ------DEETLQVCKGDTRNPKDLDPAIFEGV 152 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~------~~~~~~~v~~Di~d~~~v~~~~~~~~ 152 (214)
+.++|.|+|| |.+|..++..|+..|. +|+++++++++++.....+ .+..+.+. .| + .+ .+.+.
T Consensus 5 ~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~-~~--~----~~-a~~~a 75 (317)
T 3d0o_A 5 KGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVK-AG--E----YS-DCHDA 75 (317)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEE-EC--C----GG-GGTTC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEE-eC--C----HH-HhCCC
Confidence 4478999998 9999999999998884 8999999987654321111 01223322 21 2 22 25789
Q ss_pred cEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CC-CeEEEE
Q 028043 153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL-KRIVLV 200 (214)
Q Consensus 153 d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~-~~iV~v 200 (214)
|+||..+|....+. +.-......|..-...+++.+.+ .. ..++++
T Consensus 76 DvVvi~ag~~~~~g---~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~ 122 (317)
T 3d0o_A 76 DLVVICAGAAQKPG---ETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVA 122 (317)
T ss_dssp SEEEECCCCCCCTT---CCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred CEEEECCCCCCCCC---CcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEe
Confidence 99999999754221 11123446677777777776633 22 344443
|
| >2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00014 Score=61.41 Aligned_cols=74 Identities=18% Similarity=0.230 Sum_probs=52.8
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHC--CCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCC-hhccchhhh-C-CCcEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSR--NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN-PKDLDPAIF-E-GVTHV 155 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d-~~~v~~~~~-~-~~d~l 155 (214)
.+++|+|+|| |+||...++.+... |++|+++++++++.+.+.+ +. .. . ..|..+ .+.+++ +. + ++|++
T Consensus 170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~-lG-a~-~--vi~~~~~~~~~~~-~~~g~g~D~v 242 (344)
T 2h6e_A 170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFALE-LG-AD-Y--VSEMKDAESLINK-LTDGLGASIA 242 (344)
T ss_dssp SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHH-HT-CS-E--EECHHHHHHHHHH-HHTTCCEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHH-hC-CC-E--EeccccchHHHHH-hhcCCCccEE
Confidence 4689999999 99999999988888 9999999999988766543 22 11 1 134433 333332 22 3 69999
Q ss_pred EeccCC
Q 028043 156 ICCTGT 161 (214)
Q Consensus 156 i~~Ag~ 161 (214)
|.++|.
T Consensus 243 id~~g~ 248 (344)
T 2h6e_A 243 IDLVGT 248 (344)
T ss_dssp EESSCC
T ss_pred EECCCC
Confidence 999985
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00043 Score=57.24 Aligned_cols=71 Identities=15% Similarity=0.119 Sum_probs=52.7
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
.+.+|+++|.| .|.||+.+++.|...|++|++.+|++++.+...+ . ++..+ + .+++++ ++.+.|+|+++
T Consensus 152 ~l~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~-~---g~~~~--~---~~~l~~-~l~~aDvVi~~ 220 (293)
T 3d4o_A 152 TIHGANVAVLG-LGRVGMSVARKFAALGAKVKVGARESDLLARIAE-M---GMEPF--H---ISKAAQ-ELRDVDVCINT 220 (293)
T ss_dssp CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-T---TSEEE--E---GGGHHH-HTTTCSEEEEC
T ss_pred CCCCCEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-C---CCeec--C---hhhHHH-HhcCCCEEEEC
Confidence 56789999999 6999999999999999999999999877654432 1 22222 1 233443 35789999988
Q ss_pred cC
Q 028043 159 TG 160 (214)
Q Consensus 159 Ag 160 (214)
..
T Consensus 221 ~p 222 (293)
T 3d4o_A 221 IP 222 (293)
T ss_dssp CS
T ss_pred CC
Confidence 75
|
| >3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00024 Score=59.75 Aligned_cols=75 Identities=15% Similarity=0.166 Sum_probs=53.6
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchh--hhCCCcEEEec
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPA--IFEGVTHVICC 158 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~--~~~~~d~li~~ 158 (214)
.+++|+|+|+ |+||...++.+...|++|+++++++++.+.+.+ +. .. ...|..+.+..+.. ..+++|++|.+
T Consensus 166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-lG-a~---~~i~~~~~~~~~~~~~~~g~~d~vid~ 239 (340)
T 3s2e_A 166 PGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLARR-LG-AE---VAVNARDTDPAAWLQKEIGGAHGVLVT 239 (340)
T ss_dssp TTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-TT-CS---EEEETTTSCHHHHHHHHHSSEEEEEES
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-cC-CC---EEEeCCCcCHHHHHHHhCCCCCEEEEe
Confidence 5789999997 899999999998999999999999988876543 22 11 12455543322211 23579999999
Q ss_pred cCC
Q 028043 159 TGT 161 (214)
Q Consensus 159 Ag~ 161 (214)
+|.
T Consensus 240 ~g~ 242 (340)
T 3s2e_A 240 AVS 242 (340)
T ss_dssp SCC
T ss_pred CCC
Confidence 873
|
| >1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1 | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00044 Score=59.17 Aligned_cols=47 Identities=15% Similarity=0.126 Sum_probs=41.0
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhccc
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ 126 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~ 126 (214)
++.+|+|+|.|+ |.+|+.+++.|.+.|++|++.++++++++++.+++
T Consensus 170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ 216 (364)
T 1leh_A 170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE 216 (364)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence 468999999995 89999999999999999999999998887765543
|
| >2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00026 Score=60.02 Aligned_cols=73 Identities=16% Similarity=0.181 Sum_probs=52.1
Q ss_pred CCCEEEEEcCchHHHHHH-HHHH-HHCCCe-EEEEEcChh---HHHHHhcccCCCCEEEEEecCCChhc--cchhhhCCC
Q 028043 81 SSKLVLVAGGSGGVGQLV-VASL-LSRNIK-SRLLLRDPE---KATTLFGKQDEETLQVCKGDTRNPKD--LDPAIFEGV 152 (214)
Q Consensus 81 ~~k~vlITGasggIG~~l-a~~L-~~~G~~-V~~~~r~~~---~~~~~~~~~~~~~~~~v~~Di~d~~~--v~~~~~~~~ 152 (214)
.+++|+|+|| |+||... ++.+ ...|++ |++++++++ +.+.+.+ + ++..+ |..+.+. +.+. -+++
T Consensus 172 ~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~-l---Ga~~v--~~~~~~~~~i~~~-~gg~ 243 (357)
T 2b5w_A 172 DPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEE-L---DATYV--DSRQTPVEDVPDV-YEQM 243 (357)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHH-T---TCEEE--ETTTSCGGGHHHH-SCCE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHH-c---CCccc--CCCccCHHHHHHh-CCCC
Confidence 3489999999 9999999 8877 678997 999999887 7665542 2 23434 6654321 2222 2479
Q ss_pred cEEEeccCC
Q 028043 153 THVICCTGT 161 (214)
Q Consensus 153 d~li~~Ag~ 161 (214)
|++|.++|.
T Consensus 244 Dvvid~~g~ 252 (357)
T 2b5w_A 244 DFIYEATGF 252 (357)
T ss_dssp EEEEECSCC
T ss_pred CEEEECCCC
Confidence 999999984
|
| >2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00041 Score=59.68 Aligned_cols=75 Identities=21% Similarity=0.205 Sum_probs=54.1
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhc----cchhhhC-CCcE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD----LDPAIFE-GVTH 154 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~----v~~~~~~-~~d~ 154 (214)
.+++|+|.|+ |+||...++.+...|+ +|+++++++++++.+.+ + ++. ..|..+.+. +.+..-+ ++|+
T Consensus 185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-l---Ga~--~i~~~~~~~~~~~~~~~~~g~g~Dv 257 (398)
T 2dph_A 185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLLSD-A---GFE--TIDLRNSAPLRDQIDQILGKPEVDC 257 (398)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHT-T---TCE--EEETTSSSCHHHHHHHHHSSSCEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH-c---CCc--EEcCCCcchHHHHHHHHhCCCCCCE
Confidence 5789999996 9999999988888899 89999999988776542 2 233 246554332 2221112 6999
Q ss_pred EEeccCCC
Q 028043 155 VICCTGTT 162 (214)
Q Consensus 155 li~~Ag~~ 162 (214)
+|.++|..
T Consensus 258 vid~~g~~ 265 (398)
T 2dph_A 258 GVDAVGFE 265 (398)
T ss_dssp EEECSCTT
T ss_pred EEECCCCc
Confidence 99999853
|
| >1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=97.44 E-value=0.0013 Score=55.07 Aligned_cols=108 Identities=9% Similarity=0.094 Sum_probs=67.4
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCC--eEEEEEcChhHHHHHhcccC-----CCCEEEEEecCCChhccchhhhCCCcE
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQD-----EETLQVCKGDTRNPKDLDPAIFEGVTH 154 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~~~v~~Di~d~~~v~~~~~~~~d~ 154 (214)
.++|.|+|| |++|..++..|+..+. +|+++++++++++.....+. ...+.+. .| + .+ .+.+.|+
T Consensus 5 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~-~~--~----~~-a~~~aDv 75 (318)
T 1ez4_A 5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIY-SG--E----YS-DCKDADL 75 (318)
T ss_dssp BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEE-EC--C----GG-GGTTCSE
T ss_pred CCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEE-EC--C----HH-HhCCCCE
Confidence 368999998 9999999999998876 89999999877664222111 1223322 21 1 22 2678999
Q ss_pred EEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc--CCCeEEEEc
Q 028043 155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS--SLKRIVLVS 201 (214)
Q Consensus 155 li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~--~~~~iV~vS 201 (214)
||..+|....+.+ .-.+....|..-...+++.+.+ ....++.+|
T Consensus 76 Vii~ag~~~~~g~---~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t 121 (318)
T 1ez4_A 76 VVITAGAPQKPGE---SRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA 121 (318)
T ss_dssp EEECCCC-------------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred EEECCCCCCCCCC---CHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeC
Confidence 9999997653322 1223467788888888887743 234555543
|
| >3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00041 Score=59.16 Aligned_cols=76 Identities=17% Similarity=0.134 Sum_probs=52.6
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhc---cchhhhCCCcEEE
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD---LDPAIFEGVTHVI 156 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~---v~~~~~~~~d~li 156 (214)
..+++|+|.||+|++|...++.+...|++|+++. ++++.+.+. ++. +. ...|..+.+. +++..-+++|++|
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~-~lG---a~-~vi~~~~~~~~~~v~~~t~g~~d~v~ 236 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAK-SRG---AE-EVFDYRAPNLAQTIRTYTKNNLRYAL 236 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHH-HTT---CS-EEEETTSTTHHHHHHHHTTTCCCEEE
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHH-HcC---Cc-EEEECCCchHHHHHHHHccCCccEEE
Confidence 4678999999999999999999999999999886 666666443 332 11 1235554332 2221124699999
Q ss_pred eccCC
Q 028043 157 CCTGT 161 (214)
Q Consensus 157 ~~Ag~ 161 (214)
.++|.
T Consensus 237 d~~g~ 241 (371)
T 3gqv_A 237 DCITN 241 (371)
T ss_dssp ESSCS
T ss_pred ECCCc
Confidence 99884
|
| >1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00029 Score=60.01 Aligned_cols=75 Identities=17% Similarity=0.160 Sum_probs=52.6
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCCh-hccchhh----hCCCcE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP-KDLDPAI----FEGVTH 154 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~-~~v~~~~----~~~~d~ 154 (214)
.+++|+|+|+ |+||...++.+...|+ +|+++++++++.+.+.+ +. +. ...|..+. +++.+.+ -+++|+
T Consensus 192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~-lG---a~-~vi~~~~~~~~~~~~~~~~~~~g~D~ 265 (374)
T 1cdo_A 192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV-FG---AT-DFVNPNDHSEPISQVLSKMTNGGVDF 265 (374)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-TT---CC-EEECGGGCSSCHHHHHHHHHTSCBSE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH-hC---Cc-eEEeccccchhHHHHHHHHhCCCCCE
Confidence 5789999995 9999999999888999 79999999988776542 22 21 12354431 2222211 247999
Q ss_pred EEeccCC
Q 028043 155 VICCTGT 161 (214)
Q Consensus 155 li~~Ag~ 161 (214)
+|+++|.
T Consensus 266 vid~~g~ 272 (374)
T 1cdo_A 266 SLECVGN 272 (374)
T ss_dssp EEECSCC
T ss_pred EEECCCC
Confidence 9999984
|
| >4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00016 Score=61.55 Aligned_cols=76 Identities=18% Similarity=0.243 Sum_probs=51.8
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHH-CCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCC--hhccchhhhCCCcEEEe
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLS-RNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN--PKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d--~~~v~~~~~~~~d~li~ 157 (214)
.+++|+|+||+|+||...++.+.. .|++|+++++++++.+.+.+ +. .. . ..|..+ .+.+.+..-+++|++|.
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~-lG-ad--~-vi~~~~~~~~~v~~~~~~g~Dvvid 245 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKS-LG-AH--H-VIDHSKPLAAEVAALGLGAPAFVFS 245 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH-TT-CS--E-EECTTSCHHHHHHTTCSCCEEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH-cC-CC--E-EEeCCCCHHHHHHHhcCCCceEEEE
Confidence 578999999999999998887766 69999999999988776543 22 11 1 234432 11222210136999999
Q ss_pred ccCC
Q 028043 158 CTGT 161 (214)
Q Consensus 158 ~Ag~ 161 (214)
++|.
T Consensus 246 ~~g~ 249 (363)
T 4dvj_A 246 TTHT 249 (363)
T ss_dssp CSCH
T ss_pred CCCc
Confidence 8874
|
| >2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00044 Score=56.95 Aligned_cols=42 Identities=17% Similarity=0.204 Sum_probs=36.7
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhc
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFG 124 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~ 124 (214)
+|+|.|.|+ |.+|..++..|++.|++|++.+|++++.+.+.+
T Consensus 3 ~m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~ 44 (316)
T 2ew2_A 3 AMKIAIAGA-GAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRK 44 (316)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred CCeEEEECc-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHh
Confidence 368999995 999999999999999999999999988777653
|
| >2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A* | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00075 Score=56.05 Aligned_cols=108 Identities=12% Similarity=0.132 Sum_probs=69.4
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCC--eEEEEEcChhHHHHHhcccC------CCCEEEEEecCCChhccchhhhCCCcE
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQD------EETLQVCKGDTRNPKDLDPAIFEGVTH 154 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~------~~~~~~v~~Di~d~~~v~~~~~~~~d~ 154 (214)
|+|.|+|| |+||+.++..|+.++. +++++|.++++.+-....+. ......... .|.+ .+.+.|+
T Consensus 1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~--~d~~-----~~~~aDv 72 (294)
T 2x0j_A 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYS-----LLKGSEI 72 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEE--SCGG-----GGTTCSE
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecC--CCHH-----HhCCCCE
Confidence 57999995 9999999999988774 79999998865433211111 112222221 1222 2567999
Q ss_pred EEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CCC-eEEEEc
Q 028043 155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLK-RIVLVS 201 (214)
Q Consensus 155 li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~~-~iV~vS 201 (214)
||..||....|.+ .-.+.++.|..-...+.+++.+ ... .++.+|
T Consensus 73 VvitAG~prkpGm---tR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvs 118 (294)
T 2x0j_A 73 IVVTAGLARKPGM---TRLDLAHKNAGIIKDIAKKIVENAPESKILVVT 118 (294)
T ss_dssp EEECCCCCCCSSS---CHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred EEEecCCCCCCCC---chHHHHHHHHHHHHHHHHHHHhcCCceEEEEec
Confidence 9999998764432 2345678899888889888743 333 444444
|
| >2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=97.38 E-value=0.0016 Score=54.82 Aligned_cols=109 Identities=10% Similarity=0.105 Sum_probs=68.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC--eEEEEEcChhHHHHHhcccCC-----CCEEEEEecCCChhccchhhhCCCc
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDE-----ETLQVCKGDTRNPKDLDPAIFEGVT 153 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~-----~~~~~v~~Di~d~~~v~~~~~~~~d 153 (214)
+.++|.|+|| |.+|..++..|+..+. +|+++|+++++++.....+.. ..+.+. .| + .+ .+.+.|
T Consensus 8 ~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~~--~----~~-a~~~aD 78 (326)
T 2zqz_A 8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIY-SA--E----YS-DAKDAD 78 (326)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEE-EC--C----GG-GGGGCS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEE-EC--C----HH-HhCCCC
Confidence 3478999998 9999999999988776 899999998776553222211 223222 21 2 22 256799
Q ss_pred EEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc--CCCeEEEEc
Q 028043 154 HVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS--SLKRIVLVS 201 (214)
Q Consensus 154 ~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~--~~~~iV~vS 201 (214)
+||..+|....+.+ .-......|..-...+.+.+.+ ....++.+|
T Consensus 79 vVii~ag~~~k~g~---~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t 125 (326)
T 2zqz_A 79 LVVITAGAPQKPGE---TRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA 125 (326)
T ss_dssp EEEECCCCC--------CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred EEEEcCCCCCCCCC---CHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeC
Confidence 99999997542221 1123456677777777776632 234555553
|
| >2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A* | Back alignment and structure |
|---|
Probab=97.36 E-value=0.00044 Score=56.16 Aligned_cols=70 Identities=20% Similarity=0.257 Sum_probs=52.7
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
.+.+ +++|.|+ |++|+++++.|.+.|++|++.+|++++.+++.+.+.. . ..+ +++ . .+.|+||++
T Consensus 114 ~l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~~---~-----~~~---~~~-~-~~~Divi~~ 178 (263)
T 2d5c_A 114 PLKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFGL---R-----AVP---LEK-A-REARLLVNA 178 (263)
T ss_dssp CCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHTC---E-----ECC---GGG-G-GGCSEEEEC
T ss_pred CCCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcc---c-----hhh---Hhh-c-cCCCEEEEc
Confidence 3567 8999995 7899999999999999999999999887776654431 1 122 232 2 568999999
Q ss_pred cCCCC
Q 028043 159 TGTTA 163 (214)
Q Consensus 159 Ag~~~ 163 (214)
.....
T Consensus 179 tp~~~ 183 (263)
T 2d5c_A 179 TRVGL 183 (263)
T ss_dssp SSTTT
T ss_pred cCCCC
Confidence 88653
|
| >2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00058 Score=58.14 Aligned_cols=75 Identities=17% Similarity=0.118 Sum_probs=52.3
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCCh-hccchhh----hCCCcE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP-KDLDPAI----FEGVTH 154 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~-~~v~~~~----~~~~d~ 154 (214)
.+++|+|+|+ |+||...++.+...|+ +|+++++++++.+.+.+ +. .. ...|..+. +++.+.+ -+++|+
T Consensus 191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~-lG-a~---~vi~~~~~~~~~~~~~~~~~~~g~D~ 264 (374)
T 2jhf_A 191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE-VG-AT---ECVNPQDYKKPIQEVLTEMSNGGVDF 264 (374)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-TT-CS---EEECGGGCSSCHHHHHHHHTTSCBSE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-hC-Cc---eEecccccchhHHHHHHHHhCCCCcE
Confidence 5789999995 9999999999888999 79999999988776542 22 11 12344431 2222211 237999
Q ss_pred EEeccCC
Q 028043 155 VICCTGT 161 (214)
Q Consensus 155 li~~Ag~ 161 (214)
+|.++|.
T Consensus 265 vid~~g~ 271 (374)
T 2jhf_A 265 SFEVIGR 271 (374)
T ss_dssp EEECSCC
T ss_pred EEECCCC
Confidence 9999984
|
| >4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00065 Score=57.92 Aligned_cols=75 Identities=24% Similarity=0.259 Sum_probs=52.2
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccch------hhhCCCc
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDP------AIFEGVT 153 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~------~~~~~~d 153 (214)
.+++|+|+|+ |++|...++.+...|+ +|+++++++++.+.+.+ +. .. ...|..+.+..+. ..-+++|
T Consensus 182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-lG-a~---~vi~~~~~~~~~~i~~~~~~~~gg~D 255 (370)
T 4ej6_A 182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLAEE-VG-AT---ATVDPSAGDVVEAIAGPVGLVPGGVD 255 (370)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHH-HT-CS---EEECTTSSCHHHHHHSTTSSSTTCEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-cC-CC---EEECCCCcCHHHHHHhhhhccCCCCC
Confidence 4789999998 9999999999888999 89999999888765432 32 11 1245544332221 1113799
Q ss_pred EEEeccCC
Q 028043 154 HVICCTGT 161 (214)
Q Consensus 154 ~li~~Ag~ 161 (214)
++|.++|.
T Consensus 256 vvid~~G~ 263 (370)
T 4ej6_A 256 VVIECAGV 263 (370)
T ss_dssp EEEECSCC
T ss_pred EEEECCCC
Confidence 99999884
|
| >2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A | Back alignment and structure |
|---|
Probab=97.32 E-value=0.0022 Score=53.51 Aligned_cols=107 Identities=15% Similarity=0.082 Sum_probs=68.4
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCC--CeEEEEEcChhHHHHHhcccCC-----CCEEEEEecCCChhccchhhhCCCcEE
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQDE-----ETLQVCKGDTRNPKDLDPAIFEGVTHV 155 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~-----~~~~~v~~Di~d~~~v~~~~~~~~d~l 155 (214)
++|.|+|| |.+|..++..|+..+ .+|+++++++++++.....+.. ..+.+. .| +. + .+.+.|+|
T Consensus 1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~-~~--~~----~-a~~~aD~V 71 (310)
T 2xxj_A 1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVW-AG--SY----G-DLEGARAV 71 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEE-EC--CG----G-GGTTEEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEE-EC--CH----H-HhCCCCEE
Confidence 57999998 999999999999887 5899999998776643222211 122322 22 22 2 25789999
Q ss_pred EeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc--CCCeEEEEc
Q 028043 156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS--SLKRIVLVS 201 (214)
Q Consensus 156 i~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~--~~~~iV~vS 201 (214)
|..+|....+.+ .-......|..-...+.+.+.+ ....++.+|
T Consensus 72 ii~ag~~~~~g~---~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t 116 (310)
T 2xxj_A 72 VLAAGVAQRPGE---TRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVAT 116 (310)
T ss_dssp EECCCCCCCTTC---CHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred EECCCCCCCCCc---CHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEec
Confidence 999997643221 1123446677777777776632 234555553
|
| >1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00058 Score=58.65 Aligned_cols=74 Identities=19% Similarity=0.155 Sum_probs=53.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhc----cchhhhC--CCc
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD----LDPAIFE--GVT 153 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~----v~~~~~~--~~d 153 (214)
.+++|+|.|+ |+||...++.+...|+ +|+++++++++++.+.+ + ++. ..|..+.+. +++ ..+ ++|
T Consensus 185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~-l---Ga~--~i~~~~~~~~~~~v~~-~t~g~g~D 256 (398)
T 1kol_A 185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA-Q---GFE--IADLSLDTPLHEQIAA-LLGEPEVD 256 (398)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH-T---TCE--EEETTSSSCHHHHHHH-HHSSSCEE
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHH-c---CCc--EEccCCcchHHHHHHH-HhCCCCCC
Confidence 5789999995 9999999998888999 69999999988776543 2 233 245554332 322 122 699
Q ss_pred EEEeccCCC
Q 028043 154 HVICCTGTT 162 (214)
Q Consensus 154 ~li~~Ag~~ 162 (214)
++|.++|..
T Consensus 257 vvid~~G~~ 265 (398)
T 1kol_A 257 CAVDAVGFE 265 (398)
T ss_dssp EEEECCCTT
T ss_pred EEEECCCCc
Confidence 999999854
|
| >1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00071 Score=57.64 Aligned_cols=75 Identities=19% Similarity=0.104 Sum_probs=52.3
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCCh-hcc----chhhhCCCcE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP-KDL----DPAIFEGVTH 154 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~-~~v----~~~~~~~~d~ 154 (214)
.+++|+|+|+ |+||...++.+...|+ +|+++++++++.+.+.+ +. +. ...|..+. +++ .+..-+++|+
T Consensus 195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-lG---a~-~vi~~~~~~~~~~~~v~~~~~~g~Dv 268 (376)
T 1e3i_A 195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA-LG---AT-DCLNPRELDKPVQDVITELTAGGVDY 268 (376)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-TT---CS-EEECGGGCSSCHHHHHHHHHTSCBSE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-hC---Cc-EEEccccccchHHHHHHHHhCCCccE
Confidence 5789999995 9999999998888999 79999999988776542 22 11 12344431 222 2211247999
Q ss_pred EEeccCC
Q 028043 155 VICCTGT 161 (214)
Q Consensus 155 li~~Ag~ 161 (214)
+|.++|.
T Consensus 269 vid~~G~ 275 (376)
T 1e3i_A 269 SLDCAGT 275 (376)
T ss_dssp EEESSCC
T ss_pred EEECCCC
Confidence 9999984
|
| >1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A* | Back alignment and structure |
|---|
Probab=97.29 E-value=0.0024 Score=53.36 Aligned_cols=99 Identities=18% Similarity=0.181 Sum_probs=63.9
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC--eEEEEEcChhHHHHHhccc----C--CCCEEEEEecCCChhccchhhhCCC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQ----D--EETLQVCKGDTRNPKDLDPAIFEGV 152 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~----~--~~~~~~v~~Di~d~~~v~~~~~~~~ 152 (214)
+.++|.|+|+ |.+|..++..|+..|. +|+++++++++++.....+ . .....+. .| +. + .+.+.
T Consensus 5 ~~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~-~~--~~----~-al~~a 75 (316)
T 1ldn_A 5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIW-HG--DY----D-DCRDA 75 (316)
T ss_dssp TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEE-EC--CG----G-GTTTC
T ss_pred CCCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEE-cC--cH----H-HhCCC
Confidence 3478999998 9999999999988775 8999999987554321111 1 1123322 11 21 2 25689
Q ss_pred cEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc
Q 028043 153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP 191 (214)
Q Consensus 153 d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~ 191 (214)
|+||.++|....+.. .-.+....|..-...+++.+.
T Consensus 76 DvViia~~~~~~~g~---~r~dl~~~n~~i~~~i~~~i~ 111 (316)
T 1ldn_A 76 DLVVICAGANQKPGE---TRLDLVDKNIAIFRSIVESVM 111 (316)
T ss_dssp SEEEECCSCCCCTTT---CSGGGHHHHHHHHHHHHHHHH
T ss_pred CEEEEcCCCCCCCCC---CHHHHHHcChHHHHHHHHHHH
Confidence 999999998653322 223345667666666776663
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=97.28 E-value=0.0015 Score=57.55 Aligned_cols=75 Identities=20% Similarity=0.331 Sum_probs=63.6
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
-|+|+|.| +|.||..+|+.| +.+++|.++.+++++++.+.++++ +..++.+|-+|++-++++-....|++|..-+
T Consensus 235 ~~~v~I~G-gG~ig~~lA~~L-~~~~~v~iIE~d~~r~~~la~~l~--~~~Vi~GD~td~~~L~ee~i~~~D~~ia~T~ 309 (461)
T 4g65_A 235 YRRIMIVG-GGNIGASLAKRL-EQTYSVKLIERNLQRAEKLSEELE--NTIVFCGDAADQELLTEENIDQVDVFIALTN 309 (461)
T ss_dssp CCEEEEEC-CSHHHHHHHHHH-TTTSEEEEEESCHHHHHHHHHHCT--TSEEEESCTTCHHHHHHTTGGGCSEEEECCS
T ss_pred ccEEEEEc-chHHHHHHHHHh-hhcCceEEEecCHHHHHHHHHHCC--CceEEeccccchhhHhhcCchhhcEEEEccc
Confidence 37899998 688999999997 567999999999999999887764 4678999999999888765678999987665
|
| >1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.27 E-value=0.0008 Score=57.54 Aligned_cols=75 Identities=16% Similarity=0.189 Sum_probs=52.7
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCC-CeEEEEEcChhHHHHHhcccCCCCEEEEEecCC---Chh---ccchhhhC-CC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQDEETLQVCKGDTR---NPK---DLDPAIFE-GV 152 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~---d~~---~v~~~~~~-~~ 152 (214)
.+++|+|+| +|++|...++.+...| ++|+++++++++.+.+.+ +. .. . ..|.. +.+ .+.+..-+ ++
T Consensus 195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~-lG-a~-~--vi~~~~~~~~~~~~~v~~~~~g~g~ 268 (380)
T 1vj0_A 195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE-IG-AD-L--TLNRRETSVEERRKAIMDITHGRGA 268 (380)
T ss_dssp BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHH-TT-CS-E--EEETTTSCHHHHHHHHHHHTTTSCE
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHH-cC-Cc-E--EEeccccCcchHHHHHHHHhCCCCC
Confidence 578999999 8999999999988899 599999999988776543 22 11 1 23444 222 22221112 69
Q ss_pred cEEEeccCC
Q 028043 153 THVICCTGT 161 (214)
Q Consensus 153 d~li~~Ag~ 161 (214)
|++|.++|.
T Consensus 269 Dvvid~~g~ 277 (380)
T 1vj0_A 269 DFILEATGD 277 (380)
T ss_dssp EEEEECSSC
T ss_pred cEEEECCCC
Confidence 999999984
|
| >3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=97.26 E-value=0.0004 Score=57.69 Aligned_cols=68 Identities=12% Similarity=0.095 Sum_probs=47.2
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
.+++|+|+|| |++|...++.+...|++|++++ ++++.+.+.+ + ++..+. | | .++ +-+++|++|.++|
T Consensus 142 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~-l---Ga~~v~-~--d---~~~-v~~g~Dvv~d~~g 208 (315)
T 3goh_A 142 KQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAK-R---GVRHLY-R--E---PSQ-VTQKYFAIFDAVN 208 (315)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHH-H---TEEEEE-S--S---GGG-CCSCEEEEECC--
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHH-c---CCCEEE-c--C---HHH-hCCCccEEEECCC
Confidence 5789999999 9999999998888999999999 7777665543 2 233322 3 2 222 2346888888887
Q ss_pred C
Q 028043 161 T 161 (214)
Q Consensus 161 ~ 161 (214)
.
T Consensus 209 ~ 209 (315)
T 3goh_A 209 S 209 (315)
T ss_dssp -
T ss_pred c
Confidence 4
|
| >2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00059 Score=58.05 Aligned_cols=75 Identities=19% Similarity=0.151 Sum_probs=51.9
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCCh-hccchhh----hCCCcE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP-KDLDPAI----FEGVTH 154 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~-~~v~~~~----~~~~d~ 154 (214)
.+++|+|+|+ |+||...++.+...|+ +|+++++++++.+.+.+ +. .. ...|..+. +++.+.+ -+++|+
T Consensus 190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~-lG-a~---~vi~~~~~~~~~~~~v~~~~~~g~D~ 263 (373)
T 2fzw_A 190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAKE-FG-AT---ECINPQDFSKPIQEVLIEMTDGGVDY 263 (373)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH-HT-CS---EEECGGGCSSCHHHHHHHHTTSCBSE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-cC-Cc---eEeccccccccHHHHHHHHhCCCCCE
Confidence 5789999996 9999999998888999 79999999888766542 22 11 12344431 2222211 237999
Q ss_pred EEeccCC
Q 028043 155 VICCTGT 161 (214)
Q Consensus 155 li~~Ag~ 161 (214)
+|.++|.
T Consensus 264 vid~~g~ 270 (373)
T 2fzw_A 264 SFECIGN 270 (373)
T ss_dssp EEECSCC
T ss_pred EEECCCc
Confidence 9999984
|
| >1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00044 Score=59.44 Aligned_cols=44 Identities=16% Similarity=0.018 Sum_probs=38.2
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHh
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF 123 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~ 123 (214)
.+.+++|+|+|+ |.||..+++.+...|++|++.+|++++.+...
T Consensus 169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~ 212 (384)
T 1l7d_A 169 TVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVE 212 (384)
T ss_dssp EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHH
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 346899999995 99999999999999999999999987766554
|
| >1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00066 Score=57.44 Aligned_cols=75 Identities=13% Similarity=0.084 Sum_probs=52.1
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCC--C-hhccchh--hh-CCCc
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTR--N-PKDLDPA--IF-EGVT 153 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~--d-~~~v~~~--~~-~~~d 153 (214)
.+++|+|+|+ |+||...++.+...|+ +|+++++++++.+.+.+ +. .. . ..|.. | .+..++. .. +++|
T Consensus 171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-lG-a~-~--vi~~~~~~~~~~~~~i~~~~~~g~D 244 (356)
T 1pl8_A 171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE-IG-AD-L--VLQISKESPQEIARKVEGQLGCKPE 244 (356)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH-TT-CS-E--EEECSSCCHHHHHHHHHHHHTSCCS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-hC-CC-E--EEcCcccccchHHHHHHHHhCCCCC
Confidence 4789999996 9999999998888999 89999999988766542 22 21 1 23444 2 2222211 12 4799
Q ss_pred EEEeccCC
Q 028043 154 HVICCTGT 161 (214)
Q Consensus 154 ~li~~Ag~ 161 (214)
++|.++|.
T Consensus 245 ~vid~~g~ 252 (356)
T 1pl8_A 245 VTIECTGA 252 (356)
T ss_dssp EEEECSCC
T ss_pred EEEECCCC
Confidence 99999984
|
| >1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A* | Back alignment and structure |
|---|
Probab=97.26 E-value=0.0032 Score=52.85 Aligned_cols=101 Identities=13% Similarity=0.154 Sum_probs=62.3
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccC------CCCEEEEEecCCChhccchhhhCCCcE
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQD------EETLQVCKGDTRNPKDLDPAIFEGVTH 154 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~------~~~~~~v~~Di~d~~~v~~~~~~~~d~ 154 (214)
.++|.|.|| |.+|..++..|+..|. +|++.++++++++.....+. .....+... +| .+ .+.+.|+
T Consensus 4 ~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t--~d---~~--al~~aD~ 75 (322)
T 1t2d_A 4 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS--NT---YD--DLAGADV 75 (322)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE--CC---GG--GGTTCSE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEEC--CC---HH--HhCCCCE
Confidence 468999998 9999999999999998 89999999876654222111 111111110 22 22 2568999
Q ss_pred EEeccCCCCCCCCCCC--CCCchhHHHHHHHHHHHHHh
Q 028043 155 VICCTGTTAFPSRRWD--GDNTPEKVDWEGVRNLVSAL 190 (214)
Q Consensus 155 li~~Ag~~~~~~~~~~--~~~~~~~vNv~g~~~l~~a~ 190 (214)
||..+|....+....+ .-.+....|..-...+.+.+
T Consensus 76 Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i 113 (322)
T 1t2d_A 76 VIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHI 113 (322)
T ss_dssp EEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHH
Confidence 9999986542221100 01233455666666666665
|
| >1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A* | Back alignment and structure |
|---|
Probab=97.25 E-value=0.0028 Score=52.82 Aligned_cols=108 Identities=18% Similarity=0.055 Sum_probs=66.1
Q ss_pred CEEEEEcCchHHHHHHHHHHHHC--CCeEEEEEcChhHHHHHhcccCC------CCEEEEEecCCChhccchhhhCCCcE
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSR--NIKSRLLLRDPEKATTLFGKQDE------ETLQVCKGDTRNPKDLDPAIFEGVTH 154 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~------~~~~~v~~Di~d~~~v~~~~~~~~d~ 154 (214)
|+|.|.|+ |.+|..++..|++. |++|++.++++++++.....+.. ....+... +|. +. +.+.|+
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t--~d~---~~--l~~aDv 72 (310)
T 1guz_A 1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDY---AD--TANSDI 72 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCG---GG--GTTCSE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEEC--CCH---HH--HCCCCE
Confidence 47999998 99999999999985 78999999998776654211111 11111110 222 22 467999
Q ss_pred EEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-C-CCeEEEEc
Q 028043 155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-LKRIVLVS 201 (214)
Q Consensus 155 li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~-~~~iV~vS 201 (214)
+|.+++....+. ....+....|..-...+++.+.+ . ...+|.+|
T Consensus 73 Viiav~~p~~~g---~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~t 118 (310)
T 1guz_A 73 VIITAGLPRKPG---MTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVS 118 (310)
T ss_dssp EEECCSCCCCTT---CCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECC
T ss_pred EEEeCCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEc
Confidence 999998543111 11123445677777777776632 2 33455543
|
| >3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00062 Score=58.72 Aligned_cols=75 Identities=19% Similarity=0.164 Sum_probs=52.8
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccch--hhhC--CCcEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDP--AIFE--GVTHV 155 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~--~~~~--~~d~l 155 (214)
.+.+|+|+|| |+||...++.+...|+ +|+++++++++.+.+.+ +. .. ...|..+.+..++ ...+ ++|++
T Consensus 213 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~-lG-a~---~vi~~~~~~~~~~i~~~t~g~g~D~v 286 (404)
T 3ip1_A 213 PGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLAKE-LG-AD---HVIDPTKENFVEAVLDYTNGLGAKLF 286 (404)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHH-HT-CS---EEECTTTSCHHHHHHHHTTTCCCSEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-cC-CC---EEEcCCCCCHHHHHHHHhCCCCCCEE
Confidence 5789999998 9999999999888999 89999999988765543 22 11 1235544332221 1122 69999
Q ss_pred EeccCC
Q 028043 156 ICCTGT 161 (214)
Q Consensus 156 i~~Ag~ 161 (214)
|.++|.
T Consensus 287 id~~g~ 292 (404)
T 3ip1_A 287 LEATGV 292 (404)
T ss_dssp EECSSC
T ss_pred EECCCC
Confidence 999984
|
| >1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A* | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00033 Score=60.65 Aligned_cols=43 Identities=21% Similarity=0.209 Sum_probs=38.2
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHh
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF 123 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~ 123 (214)
+.+++|+|+|+ |.||..+++.+...|++|+++++++++++.+.
T Consensus 170 l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~ 212 (401)
T 1x13_A 170 VPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ 212 (401)
T ss_dssp ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHHH
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence 46789999995 99999999999999999999999998876653
|
| >3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00042 Score=59.14 Aligned_cols=75 Identities=19% Similarity=0.122 Sum_probs=52.6
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCC-hhc----cchhhhCCCcE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN-PKD----LDPAIFEGVTH 154 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d-~~~----v~~~~~~~~d~ 154 (214)
.+.+|+|+|+ |+||...++.+...|+ +|+++++++++++.+.+ +. +.. ..|..+ .++ +++..-+++|+
T Consensus 193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~-lG---a~~-vi~~~~~~~~~~~~i~~~~~gg~D~ 266 (378)
T 3uko_A 193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKK-FG---VNE-FVNPKDHDKPIQEVIVDLTDGGVDY 266 (378)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHT-TT---CCE-EECGGGCSSCHHHHHHHHTTSCBSE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-cC---CcE-EEccccCchhHHHHHHHhcCCCCCE
Confidence 5688999998 9999999999888999 79999999988875543 22 211 234432 122 22211247999
Q ss_pred EEeccCC
Q 028043 155 VICCTGT 161 (214)
Q Consensus 155 li~~Ag~ 161 (214)
+|.++|.
T Consensus 267 vid~~g~ 273 (378)
T 3uko_A 267 SFECIGN 273 (378)
T ss_dssp EEECSCC
T ss_pred EEECCCC
Confidence 9999985
|
| >1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00071 Score=57.55 Aligned_cols=75 Identities=12% Similarity=0.058 Sum_probs=51.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChh---ccchhhhCCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK---DLDPAIFEGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~---~v~~~~~~~~d~li 156 (214)
.+++|+|+|+ |+||...++.+...|+ +|+++++++++.+.+.+ +. .. . ..|..+.+ .+.+..-+++|++|
T Consensus 190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~-lG-a~-~--vi~~~~~~~~~~~~~~~~gg~D~vi 263 (371)
T 1f8f_A 190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQ-LG-AT-H--VINSKTQDPVAAIKEITDGGVNFAL 263 (371)
T ss_dssp TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHH-HT-CS-E--EEETTTSCHHHHHHHHTTSCEEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH-cC-CC-E--EecCCccCHHHHHHHhcCCCCcEEE
Confidence 4689999995 9999999998888899 69999999988766542 22 11 1 23444322 22221123699999
Q ss_pred eccCC
Q 028043 157 CCTGT 161 (214)
Q Consensus 157 ~~Ag~ 161 (214)
.++|.
T Consensus 264 d~~g~ 268 (371)
T 1f8f_A 264 ESTGS 268 (371)
T ss_dssp ECSCC
T ss_pred ECCCC
Confidence 99984
|
| >3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00041 Score=59.64 Aligned_cols=76 Identities=18% Similarity=0.081 Sum_probs=54.3
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecC------------------CChh
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDT------------------RNPK 142 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di------------------~d~~ 142 (214)
.+++|+|.|+ |.+|..+++.+...|++|++++|++++++.+.+ + +..++..|+ .+.+
T Consensus 183 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~-l---Ga~~~~l~~~~~~~~gya~~~~~~~~~~~~~ 257 (381)
T 3p2y_A 183 KPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS-V---GAQWLDLGIDAAGEGGYARELSEAERAQQQQ 257 (381)
T ss_dssp CCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH-T---TCEECCCC-------------CHHHHHHHHH
T ss_pred CCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c---CCeEEeccccccccccchhhhhHHHHhhhHH
Confidence 5689999996 899999999999999999999999988777653 1 223332221 0122
Q ss_pred ccchhhhCCCcEEEeccCCC
Q 028043 143 DLDPAIFEGVTHVICCTGTT 162 (214)
Q Consensus 143 ~v~~~~~~~~d~li~~Ag~~ 162 (214)
.+++ .+.+.|+||.++...
T Consensus 258 ~l~e-~l~~aDIVI~tv~iP 276 (381)
T 3p2y_A 258 ALED-AITKFDIVITTALVP 276 (381)
T ss_dssp HHHH-HHTTCSEEEECCCCT
T ss_pred HHHH-HHhcCCEEEECCCCC
Confidence 3333 357899999887543
|
| >1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00085 Score=57.11 Aligned_cols=75 Identities=17% Similarity=0.146 Sum_probs=51.6
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCCh-hcc----chhhhCCCcE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP-KDL----DPAIFEGVTH 154 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~-~~v----~~~~~~~~d~ 154 (214)
.+++|+|+|+ |+||...++.+...|+ +|+++++++++.+.+.+ +. .. ...|..+. +++ .+..-+++|+
T Consensus 191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-lG-a~---~vi~~~~~~~~~~~~i~~~t~gg~Dv 264 (373)
T 1p0f_A 191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE-LG-AT---ECLNPKDYDKPIYEVICEKTNGGVDY 264 (373)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH-TT-CS---EEECGGGCSSCHHHHHHHHTTSCBSE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH-cC-Cc---EEEecccccchHHHHHHHHhCCCCCE
Confidence 4789999995 9999999998888899 79999999988776542 22 11 12344321 122 2211247999
Q ss_pred EEeccCC
Q 028043 155 VICCTGT 161 (214)
Q Consensus 155 li~~Ag~ 161 (214)
+|.++|.
T Consensus 265 vid~~g~ 271 (373)
T 1p0f_A 265 AVECAGR 271 (373)
T ss_dssp EEECSCC
T ss_pred EEECCCC
Confidence 9999984
|
| >3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00036 Score=59.73 Aligned_cols=76 Identities=25% Similarity=0.281 Sum_probs=53.7
Q ss_pred CCCEEEEEc-CchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhc---cchhhh-CCCcEE
Q 028043 81 SSKLVLVAG-GSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD---LDPAIF-EGVTHV 155 (214)
Q Consensus 81 ~~k~vlITG-asggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~---v~~~~~-~~~d~l 155 (214)
.+.+|+|.| |+|++|...++.+...|++|+++++++++.+.+.+ +.... ..|..+.+. +.+..- .++|++
T Consensus 170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~-lGa~~----~~~~~~~~~~~~v~~~t~~~g~d~v 244 (379)
T 3iup_A 170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKA-QGAVH----VCNAASPTFMQDLTEALVSTGATIA 244 (379)
T ss_dssp TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHH-TTCSC----EEETTSTTHHHHHHHHHHHHCCCEE
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHh-CCCcE----EEeCCChHHHHHHHHHhcCCCceEE
Confidence 356899997 89999999999988899999999999988876553 32111 134444332 222111 279999
Q ss_pred EeccCC
Q 028043 156 ICCTGT 161 (214)
Q Consensus 156 i~~Ag~ 161 (214)
|.++|.
T Consensus 245 ~d~~g~ 250 (379)
T 3iup_A 245 FDATGG 250 (379)
T ss_dssp EESCEE
T ss_pred EECCCc
Confidence 999985
|
| >1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0034 Score=52.52 Aligned_cols=97 Identities=14% Similarity=0.114 Sum_probs=62.1
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCC--eEEEEEcChhHHHHHhcccC-----CCCEEEEEecCCChhccchhhhCCCcEE
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQD-----EETLQVCKGDTRNPKDLDPAIFEGVTHV 155 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~~~v~~Di~d~~~v~~~~~~~~d~l 155 (214)
|+|.|.|+ |.+|..++..|++.|+ +|++.++++++++.....+. .....+. . +|.+ .+.+.|+|
T Consensus 1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~-~--~d~~-----~~~~aDvV 71 (319)
T 1a5z_A 1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIY-A--GDYA-----DLKGSDVV 71 (319)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEE-E--CCGG-----GGTTCSEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEE-e--CCHH-----HhCCCCEE
Confidence 47999997 9999999999999999 99999999877665432111 0111221 1 2322 24679999
Q ss_pred EeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc
Q 028043 156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP 191 (214)
Q Consensus 156 i~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~ 191 (214)
|.+++....+.+ .-.+....|..-...+++.+.
T Consensus 72 iiav~~~~~~g~---~r~dl~~~n~~i~~~i~~~i~ 104 (319)
T 1a5z_A 72 IVAAGVPQKPGE---TRLQLLGRNARVMKEIARNVS 104 (319)
T ss_dssp EECCCCCCCSSC---CHHHHHHHHHHHHHHHHHHHH
T ss_pred EEccCCCCCCCC---CHHHHHHHHHHHHHHHHHHHH
Confidence 999987542211 112234456666666666663
|
| >3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP} | Back alignment and structure |
|---|
Probab=97.11 E-value=0.00097 Score=54.68 Aligned_cols=66 Identities=17% Similarity=0.199 Sum_probs=49.8
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
+++|.|.|++|.+|..+++.|++.|++|++.+|++++.+.+.+ . ++ +..+ ..+ ...+.|+||.+..
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~-~---g~-----~~~~---~~~-~~~~aDvVi~av~ 76 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQG-M---GI-----PLTD---GDG-WIDEADVVVLALP 76 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHH-T---TC-----CCCC---SSG-GGGTCSEEEECSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHh-c---CC-----CcCC---HHH-HhcCCCEEEEcCC
Confidence 4689999999999999999999999999999999988776653 1 11 2222 222 2456898887764
|
| >2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=97.10 E-value=0.012 Score=49.49 Aligned_cols=96 Identities=13% Similarity=0.096 Sum_probs=62.5
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhccc-------C-CCCEEEEEecCCChhccchhhhCCCc
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQ-------D-EETLQVCKGDTRNPKDLDPAIFEGVT 153 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~-------~-~~~~~~v~~Di~d~~~v~~~~~~~~d 153 (214)
++|.|.|| |.+|..++..|+..|+ +|++.++++++++.....+ . ..++... +| .+ .+.+.|
T Consensus 15 ~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t----~d---~~--al~~aD 84 (328)
T 2hjr_A 15 KKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGE----NN---YE--YLQNSD 84 (328)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE----SC---GG--GGTTCS
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEEC----CC---HH--HHCCCC
Confidence 68999997 9999999999999999 9999999987765421111 0 1122211 22 22 256899
Q ss_pred EEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc
Q 028043 154 HVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP 191 (214)
Q Consensus 154 ~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~ 191 (214)
+||..+|....+.. .-.+....|..-...+.+.+.
T Consensus 85 ~VI~avg~p~k~g~---tr~dl~~~n~~i~~~i~~~i~ 119 (328)
T 2hjr_A 85 VVIITAGVPRKPNM---TRSDLLTVNAKIVGSVAENVG 119 (328)
T ss_dssp EEEECCSCCCCTTC---CSGGGHHHHHHHHHHHHHHHH
T ss_pred EEEEcCCCCCCCCC---chhhHHhhhHHHHHHHHHHHH
Confidence 99999986542221 112344557666667777663
|
| >3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A* | Back alignment and structure |
|---|
Probab=97.09 E-value=0.00061 Score=56.53 Aligned_cols=38 Identities=29% Similarity=0.325 Sum_probs=32.4
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcCh
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDP 116 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~ 116 (214)
..+++++|+|.| .||+|+++++.|+..|. ++.++|.+.
T Consensus 32 ~kL~~~~VlVvG-aGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 32 EKIRTFAVAIVG-VGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp CGGGGCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred HHHhCCeEEEEC-cCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 345678999999 69999999999999997 688888764
|
| >1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A* | Back alignment and structure |
|---|
Probab=97.07 E-value=0.00043 Score=58.14 Aligned_cols=84 Identities=14% Similarity=-0.066 Sum_probs=55.1
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
++.+++++|.|++.-+|+.+++.|+..|++|++++|+..+..+..+.+............++++++++ ...+.|+||..
T Consensus 174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e-~l~~ADIVIsA 252 (320)
T 1edz_A 174 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKK-CSLDSDVVITG 252 (320)
T ss_dssp TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHH-HHHHCSEEEEC
T ss_pred CCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHH-HhccCCEEEEC
Confidence 57899999999888889999999999999999999885443322222211101111111123355554 35678999988
Q ss_pred cCCCC
Q 028043 159 TGTTA 163 (214)
Q Consensus 159 Ag~~~ 163 (214)
.|...
T Consensus 253 tg~p~ 257 (320)
T 1edz_A 253 VPSEN 257 (320)
T ss_dssp CCCTT
T ss_pred CCCCc
Confidence 88654
|
| >1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A | Back alignment and structure |
|---|
Probab=97.06 E-value=0.00034 Score=59.24 Aligned_cols=36 Identities=22% Similarity=0.362 Sum_probs=31.4
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP 116 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~ 116 (214)
.|++|+|+||+|++|...++.+...|++|+++++..
T Consensus 167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~ 202 (357)
T 1zsy_A 167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDR 202 (357)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCC
T ss_pred CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCc
Confidence 578999999999999999988888999988887653
|
| >3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0014 Score=55.01 Aligned_cols=75 Identities=15% Similarity=0.145 Sum_probs=50.8
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHC-CCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCC--hhccchhhhC-CCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN--PKDLDPAIFE-GVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d--~~~v~~~~~~-~~d~li 156 (214)
.+.+|+|+|+ |++|...++.+... |.+|+++++++++.+.+.+ +. .. .+ .|..+ .+.+.+..-+ ++|++|
T Consensus 171 ~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~-lG-a~-~~--i~~~~~~~~~v~~~t~g~g~d~v~ 244 (345)
T 3jv7_A 171 PGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALARE-VG-AD-AA--VKSGAGAADAIRELTGGQGATAVF 244 (345)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHH-TT-CS-EE--EECSTTHHHHHHHHHGGGCEEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH-cC-CC-EE--EcCCCcHHHHHHHHhCCCCCeEEE
Confidence 4689999998 99999988877766 7899999999988876543 22 11 12 22222 1223321112 799999
Q ss_pred eccCC
Q 028043 157 CCTGT 161 (214)
Q Consensus 157 ~~Ag~ 161 (214)
.++|.
T Consensus 245 d~~G~ 249 (345)
T 3jv7_A 245 DFVGA 249 (345)
T ss_dssp ESSCC
T ss_pred ECCCC
Confidence 99985
|
| >4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A* | Back alignment and structure |
|---|
Probab=97.04 E-value=0.00043 Score=62.26 Aligned_cols=69 Identities=22% Similarity=0.265 Sum_probs=59.4
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
++++|.|+ |.+|+.++++|.+.|++|+++++++++.++. . .++.+|.+|++.++++-..+.|.+|-..+
T Consensus 349 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~-------~-~~i~gD~t~~~~L~~agi~~ad~vi~~~~ 417 (565)
T 4gx0_A 349 ELIFIIGH-GRIGCAAAAFLDRKPVPFILIDRQESPVCND-------H-VVVYGDATVGQTLRQAGIDRASGIIVTTN 417 (565)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCEEEEESSCCSSCCS-------S-CEEESCSSSSTHHHHHTTTSCSEEEECCS
T ss_pred CCEEEECC-CHHHHHHHHHHHHCCCCEEEEECChHHHhhc-------C-CEEEeCCCCHHHHHhcCccccCEEEEECC
Confidence 78999995 9999999999999999999999998875542 1 67999999999999866778999997765
|
| >4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0012 Score=57.15 Aligned_cols=76 Identities=11% Similarity=0.020 Sum_probs=54.1
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEec----------------CCCh---
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGD----------------TRNP--- 141 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~D----------------i~d~--- 141 (214)
.+.+|+|.|+ |.+|...++.+...|++|+++++++++++.+.+ + +..++..+ ++++
T Consensus 189 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~-~---G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~ 263 (405)
T 4dio_A 189 PAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVAS-L---GAKFIAVEDEEFKAAETAGGYAKEMSGEYQV 263 (405)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH-T---TCEECCCCC-----------------CHHHH
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-c---CCceeecccccccccccccchhhhcchhhhh
Confidence 4679999996 899999999999999999999999988776543 2 12222222 2222
Q ss_pred ---hccchhhhCCCcEEEeccCCC
Q 028043 142 ---KDLDPAIFEGVTHVICCTGTT 162 (214)
Q Consensus 142 ---~~v~~~~~~~~d~li~~Ag~~ 162 (214)
+.+.+ .+.+.|+||+++...
T Consensus 264 ~~~~~l~e-~l~~aDVVI~tvlip 286 (405)
T 4dio_A 264 KQAALVAE-HIAKQDIVITTALIP 286 (405)
T ss_dssp HHHHHHHH-HHHTCSEEEECCCCS
T ss_pred hhHhHHHH-HhcCCCEEEECCcCC
Confidence 23443 256899999988654
|
| >2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A | Back alignment and structure |
|---|
Probab=97.02 E-value=0.011 Score=49.27 Aligned_cols=96 Identities=10% Similarity=0.033 Sum_probs=60.9
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhccc-------C-CCCEEEEEecCCChhccchhhhCCC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQ-------D-EETLQVCKGDTRNPKDLDPAIFEGV 152 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~-------~-~~~~~~v~~Di~d~~~v~~~~~~~~ 152 (214)
.++|.|.|| |.+|..++..|++.|+ +|++.++++++++.....+ . ..++... +| .+ .+.+.
T Consensus 4 ~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t----~d---~~--a~~~a 73 (317)
T 2ewd_A 4 RRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGT----DD---YA--DISGS 73 (317)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE----SC---GG--GGTTC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEEC----CC---HH--HhCCC
Confidence 468999997 9999999999999998 9999999987665421100 0 1122110 22 22 24679
Q ss_pred cEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHh
Q 028043 153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL 190 (214)
Q Consensus 153 d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~ 190 (214)
|+||.++|....+.. .-.+...-|......+++.+
T Consensus 74 DiVi~avg~p~~~g~---~r~d~~~~~~~i~~~i~~~i 108 (317)
T 2ewd_A 74 DVVIITASIPGRPKD---DRSELLFGNARILDSVAEGV 108 (317)
T ss_dssp SEEEECCCCSSCCSS---CGGGGHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCCCCCC---cHHHHHHhhHHHHHHHHHHH
Confidence 999999997543222 11223344555556666655
|
| >3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae} | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0013 Score=57.62 Aligned_cols=79 Identities=18% Similarity=0.105 Sum_probs=52.9
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCC-CcEEE
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEG-VTHVI 156 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~-~d~li 156 (214)
+++++|+|+|.|. |+.|.++|+.|+++|++|.+.++++.......+.+...++.+..+.-. + . .+.+ +|.||
T Consensus 5 ~~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~~~--~---~-~~~~~~d~vv 77 (451)
T 3lk7_A 5 TTFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVCGSHP--L---E-LLDEDFCYMI 77 (451)
T ss_dssp CTTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEEESCCC--G---G-GGGSCEEEEE
T ss_pred hhcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEEECCCh--H---H-hhcCCCCEEE
Confidence 4567899999997 889999999999999999999986531111111111234555544321 1 1 2344 89999
Q ss_pred eccCCCC
Q 028043 157 CCTGTTA 163 (214)
Q Consensus 157 ~~Ag~~~ 163 (214)
...|+..
T Consensus 78 ~spgi~~ 84 (451)
T 3lk7_A 78 KNPGIPY 84 (451)
T ss_dssp ECTTSCT
T ss_pred ECCcCCC
Confidence 9998753
|
| >3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A | Back alignment and structure |
|---|
Probab=97.00 E-value=0.00098 Score=56.26 Aligned_cols=75 Identities=19% Similarity=0.124 Sum_probs=51.1
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccch--hhhC--CCcEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDP--AIFE--GVTHV 155 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~--~~~~--~~d~l 155 (214)
.+.+|+|+|+ |+||...++.+...|+ +|+++++++++.+.+.+ +. .. ...|..+.+..++ ...+ ++|++
T Consensus 166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~-lG-a~---~vi~~~~~~~~~~v~~~t~g~g~D~v 239 (352)
T 3fpc_A 166 LGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALE-YG-AT---DIINYKNGDIVEQILKATDGKGVDKV 239 (352)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHH-HT-CC---EEECGGGSCHHHHHHHHTTTCCEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH-hC-Cc---eEEcCCCcCHHHHHHHHcCCCCCCEE
Confidence 4678999995 9999999998888999 79999999887765433 22 11 1234433322221 1122 69999
Q ss_pred EeccCC
Q 028043 156 ICCTGT 161 (214)
Q Consensus 156 i~~Ag~ 161 (214)
|.++|.
T Consensus 240 ~d~~g~ 245 (352)
T 3fpc_A 240 VIAGGD 245 (352)
T ss_dssp EECSSC
T ss_pred EECCCC
Confidence 999885
|
| >3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0023 Score=54.39 Aligned_cols=76 Identities=18% Similarity=0.219 Sum_probs=52.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChh-------------------HHHHHhccc----CCCCEEEEEe
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPE-------------------KATTLFGKQ----DEETLQVCKG 136 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~-------------------~~~~~~~~~----~~~~~~~v~~ 136 (214)
++++|+|.|+ ||+|+++++.|+..|. ++.+++++.- +.+.+.+.+ +...++.+..
T Consensus 117 ~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~ 195 (353)
T 3h5n_A 117 KNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEIAL 195 (353)
T ss_dssp HTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEEC
T ss_pred hCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEeec
Confidence 4679999995 8999999999999998 6888887631 222222111 1334566777
Q ss_pred cCCChhccchhhhCCCcEEEecc
Q 028043 137 DTRNPKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 137 Di~d~~~v~~~~~~~~d~li~~A 159 (214)
++++..++.. +.+.|+||.+.
T Consensus 196 ~i~~~~~~~~--~~~~DlVvd~~ 216 (353)
T 3h5n_A 196 NINDYTDLHK--VPEADIWVVSA 216 (353)
T ss_dssp CCCSGGGGGG--SCCCSEEEECC
T ss_pred ccCchhhhhH--hccCCEEEEec
Confidence 7776554553 57788888765
|
| >2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A | Back alignment and structure |
|---|
Probab=96.98 E-value=0.001 Score=56.58 Aligned_cols=97 Identities=19% Similarity=0.102 Sum_probs=57.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCC-----C-eEEEEEcChh--H-HHHHhcccCC-CCEEEEEecCCChhccchhhhC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRN-----I-KSRLLLRDPE--K-ATTLFGKQDE-ETLQVCKGDTRNPKDLDPAIFE 150 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G-----~-~V~~~~r~~~--~-~~~~~~~~~~-~~~~~v~~Di~d~~~v~~~~~~ 150 (214)
++++|.|.||+|.+|+.+++.|.+++ . +|+.+.++.. + .......+.+ ..+.+ .|+ ++ + .+.
T Consensus 8 ~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~--~~~-~~----~-~~~ 79 (352)
T 2nqt_A 8 NATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVV--EPT-EA----A-VLG 79 (352)
T ss_dssp SCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBC--EEC-CH----H-HHT
T ss_pred cCCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeee--ccC-CH----H-Hhc
Confidence 34689999999999999999999887 4 6676653221 1 2211111111 11111 122 11 1 245
Q ss_pred CCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEEccccc
Q 028043 151 GVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGV 205 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~vSS~~~ 205 (214)
++|+||.+.|... +..+++.+ +...++|-+|+..-
T Consensus 80 ~~DvVf~alg~~~-------------------s~~~~~~~-~~G~~vIDlSa~~R 114 (352)
T 2nqt_A 80 GHDAVFLALPHGH-------------------SAVLAQQL-SPETLIIDCGADFR 114 (352)
T ss_dssp TCSEEEECCTTSC-------------------CHHHHHHS-CTTSEEEECSSTTT
T ss_pred CCCEEEECCCCcc-------------------hHHHHHHH-hCCCEEEEECCCcc
Confidence 7999999988532 23455555 43357888888753
|
| >1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A | Back alignment and structure |
|---|
Probab=96.98 E-value=0.0015 Score=52.82 Aligned_cols=77 Identities=19% Similarity=0.197 Sum_probs=49.5
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcCh-------------------hHHHHHhcccC--CC--CEEEEE
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDP-------------------EKATTLFGKQD--EE--TLQVCK 135 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~-------------------~~~~~~~~~~~--~~--~~~~v~ 135 (214)
+++++|+|.|+ ||+|+++++.|+..|. ++.+++++. .+.+.+++.+. .+ .++.+.
T Consensus 26 l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~ 104 (251)
T 1zud_1 26 LLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQ 104 (251)
T ss_dssp HHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred HhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEe
Confidence 34679999995 7899999999999998 688876653 23333322221 22 344444
Q ss_pred ecCCChhccchhhhCCCcEEEecc
Q 028043 136 GDTRNPKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 136 ~Di~d~~~v~~~~~~~~d~li~~A 159 (214)
.+++ .+.+.+ ++.+.|+||++.
T Consensus 105 ~~~~-~~~~~~-~~~~~DvVi~~~ 126 (251)
T 1zud_1 105 QRLT-GEALKD-AVARADVVLDCT 126 (251)
T ss_dssp SCCC-HHHHHH-HHHHCSEEEECC
T ss_pred ccCC-HHHHHH-HHhcCCEEEECC
Confidence 4454 334443 356789999875
|
| >1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=96.98 E-value=0.008 Score=49.85 Aligned_cols=97 Identities=15% Similarity=0.139 Sum_probs=63.8
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCC--CeEEEEEcChhHHHHHhcccC------CCCEEEEEecCCChhccchhhhCCCcE
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQD------EETLQVCKGDTRNPKDLDPAIFEGVTH 154 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~------~~~~~~v~~Di~d~~~v~~~~~~~~d~ 154 (214)
|+|.|.| +|.+|..++..|++.| ++|++.+|++++++.+...+. ...+.... +|. + .+.+.|+
T Consensus 2 ~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~---~d~---~--~~~~aDv 72 (309)
T 1hyh_A 2 RKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVI---NDW---A--ALADADV 72 (309)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEE---SCG---G--GGTTCSE
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEe---CCH---H--HhCCCCE
Confidence 6899999 8999999999999999 799999999887765443211 11222221 222 2 2467999
Q ss_pred EEeccCCCCC----CCCCCCCCCchhHHHHHHHHHHHHHhc
Q 028043 155 VICCTGTTAF----PSRRWDGDNTPEKVDWEGVRNLVSALP 191 (214)
Q Consensus 155 li~~Ag~~~~----~~~~~~~~~~~~~vNv~g~~~l~~a~~ 191 (214)
||.+++.... +.. .-.+....|+.-...+++.+.
T Consensus 73 Viiav~~~~~~~~~~g~---~r~~l~~~n~~i~~~i~~~i~ 110 (309)
T 1hyh_A 73 VISTLGNIKLQQDNPTG---DRFAELKFTSSMVQSVGTNLK 110 (309)
T ss_dssp EEECCSCGGGTC----------CTTHHHHHHHHHHHHHHHH
T ss_pred EEEecCCcccCCCCCCC---CHHHHHHHHHHHHHHHHHHHH
Confidence 9999987542 211 112345677777777777663
|
| >3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0024 Score=52.82 Aligned_cols=42 Identities=19% Similarity=0.207 Sum_probs=37.4
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhc
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFG 124 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~ 124 (214)
.++|.|.| .|.+|..+++.|++.|++|++.+|++++.+.+.+
T Consensus 7 ~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~ 48 (303)
T 3g0o_A 7 DFHVGIVG-LGSMGMGAARSCLRAGLSTWGADLNPQACANLLA 48 (303)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred CCeEEEEC-CCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH
Confidence 46899997 7999999999999999999999999998877653
|
| >3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0014 Score=56.05 Aligned_cols=71 Identities=11% Similarity=0.113 Sum_probs=53.2
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEE
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVI 156 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li 156 (214)
+.+.+|+|+|.| +|.+|+.+++.+.+.|++|++++.++...... . .-..+..|..|.+.+.+. ...+|++.
T Consensus 8 ~~~~~~~IlIlG-~G~lg~~la~aa~~lG~~viv~d~~~~~p~~~---~---ad~~~~~~~~d~~~l~~~-~~~~dvi~ 78 (377)
T 3orq_A 8 KLKFGATIGIIG-GGQLGKMMAQSAQKMGYKVVVLDPSEDCPCRY---V---AHEFIQAKYDDEKALNQL-GQKCDVIT 78 (377)
T ss_dssp CCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCTTCTTGG---G---SSEEEECCTTCHHHHHHH-HHHCSEEE
T ss_pred cCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCCCChhhh---h---CCEEEECCCCCHHHHHHH-HHhCCcce
Confidence 445689999999 57899999999999999999999876532111 1 113567899999988864 45688774
|
| >1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T* | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0014 Score=54.43 Aligned_cols=99 Identities=17% Similarity=0.201 Sum_probs=60.7
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCC--eEEEEEcChhHHHH--H--hcccC-CCCEEEEEecCCChhccchhhhCCCcE
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATT--L--FGKQD-EETLQVCKGDTRNPKDLDPAIFEGVTH 154 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~--~--~~~~~-~~~~~~v~~Di~d~~~v~~~~~~~~d~ 154 (214)
.++|.|.|| |.+|..++..|+..|+ +|++++|++++++. . .+... .....+... ++. + .+.+.|+
T Consensus 7 ~mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~---~--~~~~aD~ 78 (319)
T 1lld_A 7 PTKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDP---E--ICRDADM 78 (319)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCG---G--GGTTCSE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeC--CCH---H--HhCCCCE
Confidence 468999997 9999999999999999 99999999866542 1 11110 011222111 122 2 2467999
Q ss_pred EEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc
Q 028043 155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP 191 (214)
Q Consensus 155 li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~ 191 (214)
||.+++....+. +...+....|......+++.++
T Consensus 79 Vii~v~~~~~~g---~~r~~~~~~n~~~~~~~~~~i~ 112 (319)
T 1lld_A 79 VVITAGPRQKPG---QSRLELVGATVNILKAIMPNLV 112 (319)
T ss_dssp EEECCCCCCCTT---CCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCC---CCHHHHHHHHHHHHHHHHHHHH
Confidence 999998653221 1112234456665556666553
|
| >3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A* | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0035 Score=55.68 Aligned_cols=69 Identities=22% Similarity=0.265 Sum_probs=50.7
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
...|++|+|.|+ |.||+.+++.+...|++|+++++++.+.+...+ .++.. .+.+ + ++.+.|+||.+
T Consensus 271 ~l~GktV~IiG~-G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~----~Ga~~-----~~l~---e-~l~~aDvVi~a 336 (494)
T 3ce6_A 271 LIGGKKVLICGY-GDVGKGCAEAMKGQGARVSVTEIDPINALQAMM----EGFDV-----VTVE---E-AIGDADIVVTA 336 (494)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH----TTCEE-----CCHH---H-HGGGCSEEEEC
T ss_pred CCCcCEEEEEcc-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCCEE-----ecHH---H-HHhCCCEEEEC
Confidence 357899999995 999999999999999999999999987655432 12221 1222 2 24568888887
Q ss_pred cCC
Q 028043 159 TGT 161 (214)
Q Consensus 159 Ag~ 161 (214)
.|.
T Consensus 337 tgt 339 (494)
T 3ce6_A 337 TGN 339 (494)
T ss_dssp SSS
T ss_pred CCC
Confidence 764
|
| >4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0023 Score=53.40 Aligned_cols=43 Identities=19% Similarity=0.322 Sum_probs=38.3
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhc
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFG 124 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~ 124 (214)
.+|+|.|.| .|.+|..+++.|++.|++|++.+|++++.+++.+
T Consensus 30 ~~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~ 72 (320)
T 4dll_A 30 YARKITFLG-TGSMGLPMARRLCEAGYALQVWNRTPARAASLAA 72 (320)
T ss_dssp CCSEEEEEC-CTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHT
T ss_pred CCCEEEEEC-ccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHH
Confidence 457899998 6999999999999999999999999998887654
|
| >4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0021 Score=54.82 Aligned_cols=45 Identities=16% Similarity=0.053 Sum_probs=38.3
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhc
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFG 124 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~ 124 (214)
++++|+|.|.| .|.+|..+++.|++.|++|++.+|++++.+.+.+
T Consensus 19 Mm~~mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~ 63 (358)
T 4e21_A 19 YFQSMQIGMIG-LGRMGADMVRRLRKGGHECVVYDLNVNAVQALER 63 (358)
T ss_dssp ---CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHT
T ss_pred hhcCCEEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH
Confidence 44568999998 7999999999999999999999999998877653
|
| >4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.83 E-value=0.00079 Score=53.21 Aligned_cols=44 Identities=16% Similarity=0.310 Sum_probs=38.0
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEE-EEcChhHHHHHhc
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRL-LLRDPEKATTLFG 124 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~-~~r~~~~~~~~~~ 124 (214)
+++++|.|.| +|.+|.++++.|++.|++|++ .+|++++.+++.+
T Consensus 21 m~mmkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~ 65 (220)
T 4huj_A 21 QSMTTYAIIG-AGAIGSALAERFTAAQIPAIIANSRGPASLSSVTD 65 (220)
T ss_dssp GGSCCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHH
T ss_pred hcCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHH
Confidence 3457899999 899999999999999999999 8999888776544
|
| >1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0013 Score=55.74 Aligned_cols=38 Identities=21% Similarity=0.281 Sum_probs=33.2
Q ss_pred CC-CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhH
Q 028043 81 SS-KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK 118 (214)
Q Consensus 81 ~~-k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~ 118 (214)
.| .+|+|+||+|+||...++.+...|++|++++++.++
T Consensus 166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~ 204 (364)
T 1gu7_A 166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPN 204 (364)
T ss_dssp TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTT
T ss_pred CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccc
Confidence 46 899999999999999999888899999999876554
|
| >3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0016 Score=52.68 Aligned_cols=42 Identities=17% Similarity=0.332 Sum_probs=36.6
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCe-EEEEEcChhHHHHHhc
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRDPEKATTLFG 124 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~ 124 (214)
+++|.|.|+ |.+|..+++.|.+.|++ |.+.+|++++.+.+.+
T Consensus 10 ~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~ 52 (266)
T 3d1l_A 10 DTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQ 52 (266)
T ss_dssp GCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHH
T ss_pred CCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHH
Confidence 467999995 99999999999999999 8899999988776654
|
| >7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A* | Back alignment and structure |
|---|
Probab=96.78 E-value=0.006 Score=52.27 Aligned_cols=113 Identities=14% Similarity=0.122 Sum_probs=66.3
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC-----eEEEEEcCh----hHHHHHhcccCC---CCEEEEEecCCChhccchhh
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI-----KSRLLLRDP----EKATTLFGKQDE---ETLQVCKGDTRNPKDLDPAI 148 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~-----~V~~~~r~~----~~~~~~~~~~~~---~~~~~v~~Di~d~~~v~~~~ 148 (214)
...+|.|+||+|.||++++-.|+..+. .|.+.+.+. +.++...-++.. +-..-+. +.+ +. .. .
T Consensus 31 ~~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~--i~~-~~-y~-~ 105 (375)
T 7mdh_A 31 KLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVS--IGI-DP-YE-V 105 (375)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEE--EES-CH-HH-H
T ss_pred CCCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcE--Eec-CC-HH-H
Confidence 346899999999999999999998764 266654332 223222111111 1111111 221 11 22 3
Q ss_pred hCCCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc--C-CCeEEEEc
Q 028043 149 FEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS--S-LKRIVLVS 201 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~--~-~~~iV~vS 201 (214)
+.+.|++|..||....|. +.-.+.++.|..-...+.+++.+ . ...++.+|
T Consensus 106 ~~daDvVVitag~prkpG---~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvs 158 (375)
T 7mdh_A 106 FEDVDWALLIGAKPRGPG---MERAALLDINGQIFADQGKALNAVASKNVKVLVVG 158 (375)
T ss_dssp TTTCSEEEECCCCCCCTT---CCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred hCCCCEEEEcCCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence 678999999999754222 22234567888888888777732 2 34555555
|
| >4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* | Back alignment and structure |
|---|
Probab=96.77 E-value=0.0026 Score=52.14 Aligned_cols=41 Identities=12% Similarity=0.052 Sum_probs=36.2
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHh
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF 123 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~ 123 (214)
.++|.|.| +|.+|..+++.|++.|++|++.+|+++.++...
T Consensus 4 ~~kV~VIG-aG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~ 44 (283)
T 4e12_A 4 ITNVTVLG-TGVLGSQIAFQTAFHGFAVTAYDINTDALDAAK 44 (283)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHH
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHH
Confidence 47899998 589999999999999999999999998876654
|
| >1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A* | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0026 Score=52.50 Aligned_cols=40 Identities=20% Similarity=0.176 Sum_probs=35.7
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHH
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATT 121 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~ 121 (214)
.+++|.|.|+ |.+|..++..|++.|++|++.+|+++.++.
T Consensus 14 ~~~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~ 53 (302)
T 1f0y_A 14 IVKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAK 53 (302)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred cCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHH
Confidence 3578999996 999999999999999999999999887664
|
| >2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0026 Score=51.11 Aligned_cols=66 Identities=12% Similarity=0.115 Sum_probs=47.9
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
++|.|.| .|.+|+.+++.|.+.|++|.+.+|++++.+.+.+... +.. ..+ .++ .+.++|+||.+..
T Consensus 4 m~i~iiG-~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g---~~~----~~~---~~~-~~~~~D~Vi~~v~ 69 (259)
T 2ahr_A 4 MKIGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLA---LPY----AMS---HQD-LIDQVDLVILGIK 69 (259)
T ss_dssp CEEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHT---CCB----CSS---HHH-HHHTCSEEEECSC
T ss_pred cEEEEEC-CCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcC---CEe----eCC---HHH-HHhcCCEEEEEeC
Confidence 6899999 7999999999999999999999999988877654321 110 122 222 2346788887775
|
| >3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0017 Score=53.28 Aligned_cols=41 Identities=24% Similarity=0.302 Sum_probs=36.5
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhc
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFG 124 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~ 124 (214)
|+|.|.| .|.+|..+++.|++.|++|++.+|++++.+.+.+
T Consensus 2 ~~i~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~ 42 (287)
T 3pef_A 2 QKFGFIG-LGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAA 42 (287)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHH
T ss_pred CEEEEEe-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH
Confidence 6799998 6999999999999999999999999988776543
|
| >2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0063 Score=50.70 Aligned_cols=107 Identities=15% Similarity=0.217 Sum_probs=67.1
Q ss_pred EEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccC------CCCEEEEEecCCChhccchhhhCCCcEEE
Q 028043 84 LVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQD------EETLQVCKGDTRNPKDLDPAIFEGVTHVI 156 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~------~~~~~~v~~Di~d~~~v~~~~~~~~d~li 156 (214)
+|.|+|| |.+|..++..|+..|. +|++.++++++++.....+. .....+... .|. + .+.+.|+||
T Consensus 1 KI~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~---~--a~~~aD~Vi 72 (308)
T 2d4a_B 1 MITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGS--NSY---E--DMRGSDIVL 72 (308)
T ss_dssp CEEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE--SCG---G--GGTTCSEEE
T ss_pred CEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEEC--CCH---H--HhCCCCEEE
Confidence 4889998 9999999999998887 69999999876654222111 112222221 222 2 257899999
Q ss_pred eccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc--CCCeEEEEc
Q 028043 157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS--SLKRIVLVS 201 (214)
Q Consensus 157 ~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~--~~~~iV~vS 201 (214)
..+|....+.+ .-.+....|..-...+++.+.+ ....+|++|
T Consensus 73 ~~ag~~~k~G~---~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t 116 (308)
T 2d4a_B 73 VTAGIGRKPGM---TREQLLEANANTMADLAEKIKAYAKDAIVVITT 116 (308)
T ss_dssp ECCSCCCCSSC---CTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred EeCCCCCCCCC---cHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeC
Confidence 99997653322 1223456677777777776632 234555554
|
| >3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A* | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0056 Score=53.32 Aligned_cols=42 Identities=29% Similarity=0.199 Sum_probs=36.7
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHH
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKAT 120 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~ 120 (214)
..+.||+++|.| .|.||+.+++.|...|++|+++++++.+..
T Consensus 216 ~~L~GktV~ViG-~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~ 257 (435)
T 3gvp_A 216 MMFGGKQVVVCG-YGEVGKGCCAALKAMGSIVYVTEIDPICAL 257 (435)
T ss_dssp CCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred ceecCCEEEEEe-eCHHHHHHHHHHHHCCCEEEEEeCChhhhH
Confidence 346899999999 588999999999999999999999986543
|
| >3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0035 Score=54.89 Aligned_cols=41 Identities=27% Similarity=0.323 Sum_probs=36.3
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHH
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA 119 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~ 119 (214)
..+.||+++|.| .|.||+.+++.+...|++|+++++++.+.
T Consensus 243 ~~L~GKTVgVIG-~G~IGr~vA~~lrafGa~Viv~d~dp~~a 283 (464)
T 3n58_A 243 VMMAGKVAVVCG-YGDVGKGSAQSLAGAGARVKVTEVDPICA 283 (464)
T ss_dssp CCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSHHHH
T ss_pred CcccCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEeCCcchh
Confidence 356899999999 67899999999999999999999988654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 214 | ||||
| d1xgka_ | 350 | c.2.1.2 (A:) Negative transcriptional regulator Nm | 8e-12 | |
| d1hdoa_ | 205 | c.2.1.2 (A:) Biliverdin IX beta reductase {Human ( | 7e-09 | |
| d1y1pa1 | 342 | c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo | 5e-08 | |
| d1db3a_ | 357 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric | 3e-06 | |
| d1orra_ | 338 | c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella | 3e-06 | |
| d1qyca_ | 307 | c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta | 2e-05 | |
| d1qyda_ | 312 | c.2.1.2 (A:) Pinoresinol-lariciresinol reductase { | 3e-05 | |
| d1z45a2 | 347 | c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep | 3e-05 | |
| d2q46a1 | 252 | c.2.1.2 (A:2-253) Hypothetical protein At5g02240 ( | 4e-05 | |
| d1t2aa_ | 347 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H | 1e-04 | |
| d1rkxa_ | 356 | c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia | 1e-04 | |
| d1yo6a1 | 250 | c.2.1.2 (A:1-250) Putative carbonyl reductase snif | 1e-04 | |
| d2a35a1 | 212 | c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse | 2e-04 | |
| d2bkaa1 | 232 | c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H | 2e-04 | |
| d2blla1 | 342 | c.2.1.2 (A:316-657) Polymyxin resistance protein A | 4e-04 | |
| d1sb8a_ | 341 | c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W | 6e-04 | |
| d1bdba_ | 276 | c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy | 6e-04 | |
| d1mlda1 | 144 | c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus s | 0.001 | |
| d1xg5a_ | 257 | c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41 | 0.001 | |
| d1e6ua_ | 315 | c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras | 0.001 | |
| d2b69a1 | 312 | c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 | 0.001 | |
| d1hdca_ | 254 | c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr | 0.001 | |
| d1hxha_ | 253 | c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge | 0.002 | |
| d1k2wa_ | 256 | c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s | 0.002 | |
| d2c5aa1 | 363 | c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T | 0.003 | |
| d2bgka1 | 268 | c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de | 0.003 | |
| d1rpna_ | 321 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo | 0.003 | |
| d1r6da_ | 322 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 0.003 | |
| d1edoa_ | 244 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 0.003 | |
| d1udca_ | 338 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 0.004 | |
| d1e5qa1 | 182 | c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase | 0.004 |
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Score = 61.2 bits (147), Expect = 8e-12
Identities = 17/102 (16%), Positives = 32/102 (31%), Gaps = 2/102 (1%)
Query: 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK 142
K + V G +G G ++ + R + + Q + + +G N
Sbjct: 4 KTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAE-ELQAIPNVTLFQGPLLNNV 62
Query: 143 DLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVR 184
L +FEG H+ T+ G + + G
Sbjct: 63 PLMDTLFEGA-HLAFINTTSQAGDEIAIGKDLADAAKRAGTI 103
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.6 bits (122), Expect = 7e-09
Identities = 16/123 (13%), Positives = 34/123 (27%), Gaps = 12/123 (9%)
Query: 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN 140
+ K + + G +G G +A + + +L+RD + +
Sbjct: 2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRL-----PSEGPRPAHVVVGDVL 56
Query: 141 PKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLV 200
G VI GT S + + + + ++V
Sbjct: 57 QAADVDKTVAGQDAVIVLLGTRNDLSPTTV-------MSEGARNIVAAMKAHGVDKVVAC 109
Query: 201 SSV 203
+S
Sbjct: 110 TSA 112
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Score = 49.8 bits (117), Expect = 5e-08
Identities = 33/144 (22%), Positives = 43/144 (29%), Gaps = 13/144 (9%)
Query: 73 DSKVTPASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEET-- 130
D+ V P LVLV G +G V VV LL K R R K L + D +
Sbjct: 4 DNAVLP--EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPG 61
Query: 131 --LQVCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLV- 187
D D I + + G N +
Sbjct: 62 RFETAVVEDMLKQGAYDEVIKGAAGVAHIA-----SVVSFSNKYDEVVTPAIGGTLNALR 116
Query: 188 -SALPSSLKRIVLVSSVGVTKFNE 210
+A S+KR VL SS +
Sbjct: 117 AAAATPSVKRFVLTSSTVSALIPK 140
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Score = 44.8 bits (105), Expect = 3e-06
Identities = 22/135 (16%), Positives = 46/135 (34%), Gaps = 11/135 (8%)
Query: 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-----DPEKATTLFGKQDE--ETLQVC 134
SK+ L+ G +G G + LL + + + R + E+ ++ +
Sbjct: 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLH 60
Query: 135 KGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL---- 190
GD + +L + E + G + + ++ VD G L+ A+
Sbjct: 61 YGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLG 120
Query: 191 PSSLKRIVLVSSVGV 205
R S+ +
Sbjct: 121 LEKKTRFYQASTSEL 135
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Score = 44.3 bits (103), Expect = 3e-06
Identities = 21/118 (17%), Positives = 40/118 (33%), Gaps = 2/118 (1%)
Query: 85 VLVAGGSGGVGQLVVASLLSRNIKSRLL--LRDPEKATTLFGKQDEETLQVCKGDTRNPK 142
+L+ GG G +G + + LS+ I + L L + GD RN
Sbjct: 3 LLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKN 62
Query: 143 DLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLV 200
D+ I + + + D +++ G NL+ A+ ++
Sbjct: 63 DVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNII 120
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Score = 42.5 bits (98), Expect = 2e-05
Identities = 19/94 (20%), Positives = 36/94 (38%), Gaps = 6/94 (6%)
Query: 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETL-----QVCK 135
S +L+ G +G +G+ V + L + LL+R+ ++ Q E+ +
Sbjct: 2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVH 61
Query: 136 GDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRW 169
G + L + V VI G+ S+
Sbjct: 62 GSIDDHASLVE-AVKNVDVVISTVGSLQIESQVN 94
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Score = 41.7 bits (96), Expect = 3e-05
Identities = 16/133 (12%), Positives = 41/133 (30%), Gaps = 16/133 (12%)
Query: 85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATT----LFGKQDEETLQVCKGDTRN 140
VL+ GG+G +G+ +V + +S + +L R + + + ++ +
Sbjct: 6 VLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEAS--- 62
Query: 141 PKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLV 200
+ + V S G + ++ + + + + L
Sbjct: 63 -------LDDHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVE--AIKEAGNIKRFLP 113
Query: 201 SSVGVTKFNELPW 213
S G+
Sbjct: 114 SEFGMDPDIMEHA 126
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 41.6 bits (96), Expect = 3e-05
Identities = 18/111 (16%), Positives = 32/111 (28%), Gaps = 3/111 (2%)
Query: 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRL---LLRDPEKATTLFGKQDEETLQVCKGDT 138
SK+VLV GG+G +G V L+ + L + + + + D
Sbjct: 1 SKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDL 60
Query: 139 RNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSA 189
+ K L+ E + + G L+
Sbjct: 61 CDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLEL 111
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 41.0 bits (94), Expect = 4e-05
Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Query: 80 SSSKLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGK 125
++ VLV G SG GQ+V L + ++ L+R + + G+
Sbjct: 1 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGE 48
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.0 bits (92), Expect = 1e-04
Identities = 23/135 (17%), Positives = 43/135 (31%), Gaps = 12/135 (8%)
Query: 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP--------EKATTLFGKQDEETLQVC 134
+ L+ G +G G + LL + + ++R E E +++
Sbjct: 2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLH 61
Query: 135 KGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL---- 190
GD + L I E I G + +D VD G L+ A+
Sbjct: 62 YGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCG 121
Query: 191 PSSLKRIVLVSSVGV 205
+ + S+ +
Sbjct: 122 LINSVKFYQASTSEL 136
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Score = 39.8 bits (91), Expect = 1e-04
Identities = 19/108 (17%), Positives = 34/108 (31%), Gaps = 1/108 (0%)
Query: 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF-GKQDEETLQVCKGDTRNP 141
K V V G +G G + L + + +LF + + +Q GD R+
Sbjct: 9 KRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQ 68
Query: 142 KDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSA 189
L +I E ++ + + G L+ A
Sbjct: 69 NKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEA 116
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Score = 39.5 bits (91), Expect = 1e-04
Identities = 23/119 (19%), Positives = 39/119 (32%), Gaps = 9/119 (7%)
Query: 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLL--RDPEKATTLFGKQDEETLQVCKGDT 138
S V+V G + G+G +V L+ ++ RD EKAT L +D + V
Sbjct: 2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSR-VHVLPLTV 60
Query: 139 RNPKDLDPAI------FEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP 191
K LD + + S + + + + N S +
Sbjct: 61 TCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVL 119
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Score = 39.0 bits (89), Expect = 2e-04
Identities = 16/89 (17%), Positives = 33/89 (37%), Gaps = 9/89 (10%)
Query: 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN 140
+ K VL+AG +G G+ ++ +LS ++++ ++
Sbjct: 1 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAP---------ARKALAEHPRLDNPVGP 51
Query: 141 PKDLDPAIFEGVTHVICCTGTTAFPSRRW 169
+L P + + CC GTT +
Sbjct: 52 LAELLPQLDGSIDTAFCCLGTTIKEAGSE 80
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.6 bits (88), Expect = 2e-04
Identities = 15/100 (15%), Positives = 31/100 (31%)
Query: 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN 140
+K V + G SG G++++ +L + + S++ L K T +V + +
Sbjct: 13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLD 72
Query: 141 PKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDW 180
+ + T A D
Sbjct: 73 DYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSA 112
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Score = 38.4 bits (87), Expect = 4e-04
Identities = 13/85 (15%), Positives = 23/85 (27%), Gaps = 2/85 (2%)
Query: 85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
VL+ G +G +G + LL + L A + F +GD +
Sbjct: 3 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPH--FHFVEGDISIHSEW 60
Query: 145 DPAIFEGVTHVICCTGTTAFPSRRW 169
+ V+
Sbjct: 61 IEYHVKKCDVVLPLVAIATPIEYTR 85
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Score = 37.6 bits (86), Expect = 6e-04
Identities = 21/117 (17%), Positives = 47/117 (40%), Gaps = 9/117 (7%)
Query: 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIK-------SRLLLRDPEKATTLFGKQDEETLQ 132
+ K+ L+ G +G +G ++ +LL + K + R+ ++ +L ++ +
Sbjct: 14 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFK 73
Query: 133 VCKGDTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSA 189
+GD RN D + A + + S + T + +G N++ A
Sbjct: 74 FIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRS--INDPITSNATNIDGFLNMLIA 128
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Score = 37.3 bits (86), Expect = 6e-04
Identities = 28/142 (19%), Positives = 53/142 (37%), Gaps = 20/142 (14%)
Query: 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK 142
+ VL+ GG+ G+G+ +V ++ K +L + E+ L + L GD R+ +
Sbjct: 6 EAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVL-GIVGDVRSLE 64
Query: 143 DLDPAI------FEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGV--RNLVS------ 188
D A F + +I G + + D ++ V N+
Sbjct: 65 DQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVK 124
Query: 189 -ALPSSLKR----IVLVSSVGV 205
LP+ + I +S+ G
Sbjct: 125 ACLPALVASRGNVIFTISNAGF 146
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} Length = 144 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Score = 36.1 bits (83), Expect = 0.001
Identities = 17/79 (21%), Positives = 29/79 (36%), Gaps = 2/79 (2%)
Query: 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP 141
+K+ ++ G SGG+GQ + L + + SRL L D +
Sbjct: 1 AKVAVL-GASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGV-AADLSHIETRATVKGYLG 58
Query: 142 KDLDPAIFEGVTHVICCTG 160
+ P +G V+ G
Sbjct: 59 PEQLPDCLKGCDVVVIPAG 77
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.8 bits (85), Expect = 0.001
Identities = 26/142 (18%), Positives = 42/142 (29%), Gaps = 20/142 (14%)
Query: 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK----ATTLFGKQDEETLQVCKGDT 138
+L LV G SGG+G V +L+ + +K R A TL + D
Sbjct: 11 RLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDL 70
Query: 139 RNPKDLDPAI------FEGVTHVICCTGTTAF-PSRRWDGDNTPEKVD---WEGVRNLVS 188
N +D+ GV I G + +
Sbjct: 71 SNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTRE 130
Query: 189 ALPSSLK------RIVLVSSVG 204
A S + I+ ++S+
Sbjct: 131 AYQSMKERNVDDGHIININSMS 152
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Score = 36.8 bits (84), Expect = 0.001
Identities = 15/127 (11%), Positives = 36/127 (28%), Gaps = 20/127 (15%)
Query: 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN 140
+ + V +AG G VG + L R +L E + +
Sbjct: 1 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE------------------LNLLD 42
Query: 141 PKDLDPAI-FEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLV-SALPSSLKRIV 198
+ + E + V + N++ +A + + +++
Sbjct: 43 SRAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLL 102
Query: 199 LVSSVGV 205
+ S +
Sbjct: 103 FLGSSCI 109
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.6 bits (84), Expect = 0.001
Identities = 22/123 (17%), Positives = 49/123 (39%), Gaps = 6/123 (4%)
Query: 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK 142
K +L+ GG+G VG + L+ + ++ + T + E + + N
Sbjct: 2 KRILITGGAGFVGSHLTDKLMMDGHEVTVV----DNFFTGRKRNVEHWIGHENFELINHD 57
Query: 143 DLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSS 202
++P ++ V + + P+ ++ T K + G N++ R++L S+
Sbjct: 58 VVEP-LYIEVDQIYHLASPASPPNYMYNPIKT-LKTNTIGTLNMLGLAKRVGARLLLAST 115
Query: 203 VGV 205
V
Sbjct: 116 SEV 118
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Score = 36.5 bits (84), Expect = 0.001
Identities = 21/141 (14%), Positives = 46/141 (32%), Gaps = 15/141 (10%)
Query: 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK 142
K V++ GG+ G+G ++ + L E+ ++ + + D +
Sbjct: 6 KTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATA-RELGDAARYQHLDVTIEE 64
Query: 143 DLDPAI------FEGVTHVICCTGTTAFPSRRWDGDNTPEK---VDWEGVRNLVSALPSS 193
D + F V ++ G + + K ++ GV + + +
Sbjct: 65 DWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPA 124
Query: 194 LK-----RIVLVSSVGVTKFN 209
+K IV +SS
Sbjct: 125 MKDAGGGSIVNISSAAGLMGL 145
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Score = 35.7 bits (82), Expect = 0.002
Identities = 27/135 (20%), Positives = 50/135 (37%), Gaps = 14/135 (10%)
Query: 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK 142
K+ LV GG+ GVG VV LL K + L + E ++ V + D +
Sbjct: 7 KVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFV-RHDVSSEA 65
Query: 143 DLDPAI------FEGVTHVICCTGTTA---FPSRRWDGDNTPEKVDWEGVRNLVSALPSS 193
D + + ++ G + R + + K++ E V ++
Sbjct: 66 DWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAA 125
Query: 194 LK----RIVLVSSVG 204
+K I+ ++SV
Sbjct: 126 MKETGGSIINMASVS 140
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Score = 35.5 bits (81), Expect = 0.002
Identities = 14/110 (12%), Positives = 32/110 (29%), Gaps = 4/110 (3%)
Query: 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK 142
K L+ G + G+G+ + + + + + E A + + D +
Sbjct: 6 KTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAI-ALDVTDQA 64
Query: 143 DLDP---AIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSA 189
+D + + + A + T E D N+
Sbjct: 65 SIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGT 114
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 35.7 bits (81), Expect = 0.003
Identities = 17/130 (13%), Positives = 35/130 (26%), Gaps = 6/130 (4%)
Query: 85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL 144
+ + G G + + L +D + D R ++
Sbjct: 18 ISITGAGGFIASHIARRLKHEGHYVIASDW----KKNEHMTEDMFCDEFHLVDLRVMENC 73
Query: 145 DPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLV-SALPSSLKRIVLVSSV 203
+ EGV HV + + N++ +A + +KR SS
Sbjct: 74 LK-VTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSA 132
Query: 204 GVTKFNELPW 213
+ +
Sbjct: 133 CIYPEFKQLE 142
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Score = 35.4 bits (81), Expect = 0.003
Identities = 13/114 (11%), Positives = 33/114 (28%), Gaps = 6/114 (5%)
Query: 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGK-QDEETLQVCKGDTRNP 141
K+ ++ GG+GG+G+ + K + + + + + D
Sbjct: 7 KVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKD 66
Query: 142 KDLDPAIFE-----GVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL 190
+D+ + G ++ + + E N+ A
Sbjct: 67 EDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAF 120
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 35.8 bits (81), Expect = 0.003
Identities = 22/106 (20%), Positives = 39/106 (36%), Gaps = 2/106 (1%)
Query: 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRN 140
+ LV G +G G + LL + + L+ T ++ E +Q GD +
Sbjct: 1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMAD 60
Query: 141 PKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNL 186
+ A+ + + +F W+ T VD GV +L
Sbjct: 61 ACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHL 106
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Score = 35.6 bits (81), Expect = 0.003
Identities = 28/140 (20%), Positives = 48/140 (34%), Gaps = 12/140 (8%)
Query: 85 VLVAGGSGGVGQLVVASLLSRNIKSRLL--------LRDPEKATTLFGKQDEETLQVCKG 136
+LV GG+G +G V LL+ L L + L+ G
Sbjct: 3 LLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHG 62
Query: 137 DTRNPKDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLV-SALPSSLK 195
D R+ A I + R G + + + +G + L+ A+ + +
Sbjct: 63 DIRDAG--LLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVG 120
Query: 196 RIVLVSSVGVT-KFNELPWR 214
R+V VS+ V + W
Sbjct: 121 RVVHVSTNQVYGSIDSGSWT 140
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Score = 35.1 bits (80), Expect = 0.003
Identities = 28/140 (20%), Positives = 45/140 (32%), Gaps = 17/140 (12%)
Query: 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEE---TLQVCKGDT 138
S +V+V G S G+G+ + SL K + KA KQ E GD
Sbjct: 1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDV 60
Query: 139 RNPKDLD----------PAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVS 188
D++ I V + T ++ D + +
Sbjct: 61 SKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQA 120
Query: 189 ALPSSLK----RIVLVSSVG 204
A +K RI+ ++SV
Sbjct: 121 ATKIMMKKRKGRIINIASVV 140
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Score = 35.3 bits (80), Expect = 0.004
Identities = 21/125 (16%), Positives = 38/125 (30%), Gaps = 4/125 (3%)
Query: 85 VLVAGGSGGVGQLVVASLLSRNIKSRL---LLRDPEKATTLFGKQDEETLQVCKGDTRNP 141
VLV GGSG +G LL + L + + + +GD RN
Sbjct: 3 VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNE 62
Query: 142 KDLDPAIFEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLV-SALPSSLKRIVLV 200
+ + + + + G L+ + +++K +
Sbjct: 63 ALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFS 122
Query: 201 SSVGV 205
SS V
Sbjct: 123 SSATV 127
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 182 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Score = 34.6 bits (78), Expect = 0.004
Identities = 16/63 (25%), Positives = 23/63 (36%), Gaps = 1/63 (1%)
Query: 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN 140
++K VL+ GSG V + + L IK + R E A L T +
Sbjct: 1 ATKSVLM-LGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDA 59
Query: 141 PKD 143
D
Sbjct: 60 ALD 62
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 214 | |||
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 99.9 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 99.9 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 99.9 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 99.9 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 99.9 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 99.9 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 99.9 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 99.9 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 99.9 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 99.89 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 99.89 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.89 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 99.89 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 99.89 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 99.89 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 99.89 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 99.89 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 99.89 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 99.89 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 99.89 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 99.89 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 99.89 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 99.88 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 99.88 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 99.88 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 99.88 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 99.87 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 99.87 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 99.87 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 99.87 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 99.86 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 99.86 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.86 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 99.86 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 99.86 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 99.86 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 99.85 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 99.85 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 99.85 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 99.84 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 99.84 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 99.84 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.83 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 99.83 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 99.83 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 99.83 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.82 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 99.82 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 99.82 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 99.82 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 99.81 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 99.81 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 99.81 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 99.8 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 99.79 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.78 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 99.78 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.77 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.77 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.76 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 99.76 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 99.76 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 99.75 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 99.74 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.74 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 99.74 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 99.74 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 99.73 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 99.73 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.72 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 99.71 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.7 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 99.69 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 99.68 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 99.68 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 99.67 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 99.67 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 99.67 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.66 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 99.65 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 99.63 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.6 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.6 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 99.58 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 99.58 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 99.57 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 99.57 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.55 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 99.53 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 99.49 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 99.49 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 99.47 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.47 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 99.46 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.36 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 99.35 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.18 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 98.75 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 98.6 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 98.55 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 98.43 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 98.28 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 98.25 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 98.24 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 98.23 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 98.22 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 98.15 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 98.14 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 98.12 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 98.1 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 98.08 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 98.07 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 98.05 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 98.05 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 98.03 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 98.03 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 98.01 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 97.98 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 97.93 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 97.92 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 97.91 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 97.88 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 97.84 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 97.84 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 97.82 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 97.81 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 97.8 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 97.79 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 97.78 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 97.78 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 97.76 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 97.75 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 97.74 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 97.73 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 97.69 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 97.67 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 97.66 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 97.64 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 97.64 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 97.63 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 97.62 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 97.61 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 97.59 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 97.58 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 97.56 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 97.55 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 97.54 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 97.49 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 97.47 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 97.45 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 97.43 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 97.4 | |
| d1c1da1 | 201 | Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ | 97.38 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 97.36 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 97.36 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 97.33 | |
| d1nvta1 | 177 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 97.32 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 97.23 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 97.18 | |
| d1leha1 | 230 | Leucine dehydrogenase {Bacillus sphaericus [TaxId: | 97.15 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 97.15 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 97.09 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 97.06 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 97.04 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 96.99 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 96.98 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 96.98 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 96.96 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 96.94 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 96.91 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 96.89 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 96.84 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 96.79 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 96.78 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 96.77 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 96.76 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 96.73 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 96.66 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 96.64 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 96.6 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 96.56 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 96.54 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 96.53 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 96.43 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 96.31 | |
| d2bzga1 | 229 | Thiopurine S-methyltransferase {Human (Homo sapien | 96.28 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 96.24 | |
| d1pjza_ | 201 | Thiopurine S-methyltransferase {Pseudomonas syring | 96.2 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 96.19 | |
| d1edza1 | 171 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 96.19 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 96.14 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 96.11 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 96.09 | |
| d1mb4a1 | 147 | Aspartate beta-semialdehyde dehydrogenase {Vibrio | 96.06 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 96.05 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 96.04 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 96.01 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 96.0 | |
| d1hwxa1 | 293 | Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: | 95.95 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 95.79 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 95.77 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 95.75 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 95.61 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 95.57 | |
| d1v8ba1 | 163 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 95.56 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 95.52 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 95.5 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 95.49 | |
| d1v9la1 | 242 | Glutamate dehydrogenase {Pyrobaculum islandicum [T | 95.49 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 95.48 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 95.46 | |
| d1seza1 | 373 | Protoporphyrinogen oxidase {Tobacco (Nicotiana tab | 95.44 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 95.41 | |
| d2cvoa1 | 183 | Putative semialdehyde dehydrogenase {Rice (Oryza s | 95.4 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 95.36 | |
| d1yovb1 | 426 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 95.35 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 95.34 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 95.24 | |
| d1l7da1 | 183 | Nicotinamide nucleotide transhydrogenase dI compon | 95.17 | |
| d1dlja2 | 196 | UDP-glucose dehydrogenase (UDPGDH) {Streptococcus | 95.12 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 95.12 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 95.09 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 95.03 | |
| d1vkna1 | 176 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 95.02 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 94.97 | |
| d2gv8a2 | 107 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 94.92 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 94.91 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 94.84 | |
| d2bi7a1 | 314 | UDP-galactopyranose mutase, N-terminal domain {Kle | 94.79 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 94.75 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 94.69 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 94.66 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 94.66 | |
| d2g17a1 | 179 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 94.56 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 94.45 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 94.43 | |
| d1yova1 | 529 | Amyloid beta precursor protein-binding protein 1, | 94.42 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 94.33 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 94.31 | |
| d1wzna1 | 251 | Hypothetical methyltransferase PH1305 {Archaeon Py | 94.2 | |
| d1djqa2 | 156 | Trimethylamine dehydrogenase, C-terminal domain {M | 94.19 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 93.86 | |
| d1djqa3 | 233 | Trimethylamine dehydrogenase, middle domain {Methy | 93.66 | |
| d2ivda1 | 347 | Protoporphyrinogen oxidase {Myxococcus xanthus [Ta | 93.57 | |
| d1ve3a1 | 226 | Hypothetical protein PH0226 {Archaeon Pyrococcus h | 93.39 | |
| d2bcgg1 | 297 | Guanine nucleotide dissociation inhibitor, GDI {Ba | 93.39 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 93.38 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 93.36 | |
| d1m6ya2 | 192 | TM0872, methyltransferase domain {Thermotoga marit | 93.33 | |
| d1ne2a_ | 197 | Hypothetical protein Ta1320 {Archaeon Thermoplasma | 93.21 | |
| d2fyta1 | 311 | Protein arginine N-methyltransferase 3, PRMT3 {Hum | 93.18 | |
| d1vl5a_ | 231 | Hypothetical protein BH2331 {Bacillus halodurans [ | 93.12 | |
| d1b26a1 | 234 | Glutamate dehydrogenase {Thermotoga maritima [TaxI | 92.95 | |
| d1y8ca_ | 246 | Putative methyltransferase CAC2371 {Clostridium ac | 92.88 | |
| d1dl5a1 | 213 | Protein-L-isoaspartyl O-methyltransferase {Thermot | 92.85 | |
| d1p9oa_ | 290 | Phosphopantothenoylcysteine synthetase {Human (Hom | 92.73 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 92.73 | |
| d1ihua2 | 279 | Arsenite-translocating ATPase ArsA {Escherichia co | 92.6 | |
| d1bgva1 | 255 | Glutamate dehydrogenase {Clostridium symbiosum [Ta | 92.51 | |
| d1q1ra1 | 185 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 92.49 | |
| d2gf3a1 | 281 | Sarcosine oxidase {Bacillus sp., strain b0618 [Tax | 92.46 | |
| d1g3qa_ | 237 | Cell division regulator MinD {Archaeon Pyrococcus | 92.45 | |
| d1cp2a_ | 269 | Nitrogenase iron protein {Clostridium pasteurianum | 92.35 | |
| d1obba1 | 171 | Alpha-glucosidase AglA {Thermotoga maritima [TaxId | 92.33 | |
| d2i76a2 | 153 | Hypothetical protein TM1727 {Thermotoga maritima [ | 92.17 | |
| d2dw4a2 | 449 | Lysine-specific histone demethylase 1, LSD1 {Human | 92.11 | |
| d1nt2a_ | 209 | Fibrillarin homologue {Archaeon Archaeoglobus fulg | 92.05 | |
| d2i6ga1 | 198 | Putative methyltransferase TehB {Salmonella typhim | 91.97 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 91.94 | |
| d3etja2 | 78 | N5-carboxyaminoimidazole ribonucleotide synthetase | 91.88 | |
| d1k0ia1 | 292 | p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a | 91.86 | |
| d1i1na_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Human ( | 91.8 | |
| d1u8xx1 | 167 | Maltose-6'-phosphate glucosidase GlvA {Bacillus su | 91.68 | |
| d1jg1a_ | 215 | Protein-L-isoaspartyl O-methyltransferase {Archaeo | 91.62 | |
| d1pj5a2 | 305 | N,N-dimethylglycine oxidase {Arthrobacter globifor | 91.6 | |
| d1hyqa_ | 232 | Cell division regulator MinD {Archaeon Archaeoglob | 91.55 | |
| d1vbfa_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Sulfolo | 91.35 | |
| d1d5ta1 | 336 | Guanine nucleotide dissociation inhibitor, GDI {Co | 91.33 | |
| d1wy7a1 | 201 | Hypothetical protein PH1948 {Archaeon Pyrococcus h | 91.31 | |
| d1byia_ | 224 | Dethiobiotin synthetase {Escherichia coli [TaxId: | 91.08 | |
| d1i8ta1 | 298 | UDP-galactopyranose mutase, N-terminal domain {Esc | 90.89 | |
| d1gsoa2 | 105 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 90.82 | |
| d1a9xa3 | 127 | Carbamoyl phosphate synthetase (CPS), large subuni | 90.71 | |
| d1xeaa1 | 167 | Putative oxidoreductase VCA1048 {Vibrio cholerae [ | 90.42 | |
| d2afhe1 | 289 | Nitrogenase iron protein {Azotobacter vinelandii [ | 90.34 | |
| d1up7a1 | 162 | 6-phospho-beta-glucosidase {Thermotoga maritima [T | 90.08 | |
| d1aoga2 | 117 | Trypanothione reductase {Trypanosoma cruzi [TaxId: | 89.84 | |
| d1wg8a2 | 182 | TM0872, methyltransferase domain {Thermus thermoph | 89.84 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 89.8 | |
| d1dusa_ | 194 | Hypothetical protein MJ0882 {Archaeon Methanococcu | 89.73 | |
| d2gv8a1 | 335 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 89.66 | |
| d1gtma1 | 239 | Glutamate dehydrogenase {Archaeon Pyrococcus furio | 89.63 | |
| d2nxca1 | 254 | PrmA-like protein TTHA0656 (TT0836) {Thermus therm | 89.56 | |
| d1b5qa1 | 347 | Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | 89.35 | |
| d1kifa1 | 246 | D-aminoacid oxidase, N-terminal domain {Pig (Sus s | 89.26 | |
| d2v5za1 | 383 | Monoamine oxidase B {Human (Homo sapiens) [TaxId: | 89.1 | |
| d1nv8a_ | 271 | N5-glutamine methyltransferase, HemK {Thermotoga m | 89.08 | |
| d1feca2 | 117 | Trypanothione reductase {Crithidia fasciculata [Ta | 88.94 | |
| d1oria_ | 316 | Protein arginine N-methyltransferase 1, PRMT1 {Rat | 88.91 | |
| d1nhpa1 | 198 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 88.51 | |
| d1n4wa1 | 367 | Cholesterol oxidase of GMC family {Streptomyces sp | 88.48 | |
| d1xxla_ | 234 | Hypothetical protein YcgJ {Bacillus subtilis [TaxI | 88.46 | |
| d2i0za1 | 251 | Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396] | 88.11 | |
| d3c96a1 | 288 | Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: | 88.02 | |
| d1m6ia2 | 137 | Apoptosis-inducing factor (AIF) {Human (Homo sapie | 87.92 | |
| d1a9xa4 | 121 | Carbamoyl phosphate synthetase (CPS), large subuni | 87.86 | |
| d2d59a1 | 139 | Hypothetical protein PH1109 {Pyrococcus horikoshii | 87.82 | |
| d1g6q1_ | 328 | Arginine methyltransferase, HMT1 {Baker's yeast (S | 87.74 | |
| d1y0pa2 | 308 | Flavocytochrome c3 (respiratory fumarate reductase | 87.49 | |
| d1l3ia_ | 186 | Precorrin-6Y methyltransferase (CbiT) {Archaeon Me | 87.39 | |
| d1nvmb1 | 157 | Acetaldehyde dehydrogenase (acylating) {Pseudomona | 87.34 | |
| d1xhca1 | 167 | NADH oxidase /nitrite reductase {Pyrococcus furios | 87.07 | |
| d1s6ya1 | 169 | 6-phospho-beta-glucosidase {Bacillus stearothermop | 86.84 | |
| d1y81a1 | 116 | Hypothetical protein PF0725 {Pyrococcus furiosus [ | 86.68 | |
| d1ydwa1 | 184 | Probable oxidoreductase At4g09670 {Thale cress (Ar | 86.64 | |
| d2h00a1 | 250 | Methyltransferase 10 domain containing protein MET | 86.52 | |
| d1ri5a_ | 252 | mRNA cap (Guanine N-7) methyltransferase {Fungus ( | 86.42 | |
| d2blna2 | 203 | Polymyxin resistance protein ArnA, N-terminal doma | 86.4 | |
| d1g8aa_ | 227 | Fibrillarin homologue {Archaeon Pyrococcus horikos | 86.25 | |
| d1f06a1 | 170 | Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb | 86.16 | |
| d1diha1 | 162 | Dihydrodipicolinate reductase {Escherichia coli [T | 86.01 | |
| d1d7ya1 | 183 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 85.98 | |
| d2cvza2 | 156 | Hydroxyisobutyrate dehydrogenase {Thermus thermoph | 85.57 | |
| d2ex4a1 | 222 | Adrenal gland protein AD-003 (C9orf32) {Human (Hom | 85.57 | |
| d1uwva2 | 358 | rRNA (Uracil-5-)-methyltransferase RumA, catalytic | 85.56 | |
| d2o57a1 | 282 | Putative sarcosine dimethylglycine methyltransfera | 85.32 | |
| d1w4xa2 | 235 | Phenylacetone monooxygenase {Thermobifida fusca [T | 85.17 | |
| d2gqfa1 | 253 | Hypothetical protein HI0933 {Haemophilus influenza | 84.72 | |
| d1d4ca2 | 322 | Flavocytochrome c3 (respiratory fumarate reductase | 84.66 | |
| d3coxa1 | 370 | Cholesterol oxidase of GMC family {Brevibacterium | 84.3 | |
| d1g8sa_ | 230 | Fibrillarin homologue {Archaeon Methanococcus jann | 84.28 | |
| d1r18a_ | 223 | Protein-L-isoaspartyl O-methyltransferase {Fruit f | 84.14 | |
| d2p7ia1 | 225 | Hypothetical protein ECA1738 {Erwinia carotovora [ | 83.9 | |
| d1gesa1 | 217 | Glutathione reductase {Escherichia coli [TaxId: 56 | 83.86 | |
| d1gtea3 | 153 | Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su | 83.72 | |
| d1w4xa1 | 298 | Phenylacetone monooxygenase {Thermobifida fusca [T | 83.56 | |
| d2f5va1 | 379 | Pyranose 2-oxidase {White-rot fungus (Peniophora s | 83.36 | |
| d1yb2a1 | 250 | Hypothetical protein Ta0852 {Thermoplasma acidophi | 83.3 | |
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 83.11 | |
| d1rp0a1 | 278 | Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara | 82.85 | |
| d1wxxa2 | 318 | Hypothetical protein TTHA1280, middle and C-termin | 82.71 | |
| d1nkva_ | 245 | Hypothetical Protein YjhP {Escherichia coli [TaxId | 81.79 | |
| d1zh8a1 | 181 | Hypothetical protein TM0312 {Thermotoga maritima [ | 81.5 | |
| d1qo8a2 | 317 | Flavocytochrome c3 (respiratory fumarate reductase | 81.48 | |
| d1pn0a1 | 360 | Phenol hydroxylase {Soil-living yeast (Trichosporo | 81.24 | |
| d1h6da1 | 221 | Glucose-fructose oxidoreductase, N-terminal domain | 80.59 | |
| d1trba1 | 190 | Thioredoxin reductase {Escherichia coli [TaxId: 56 | 80.27 |
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=99.90 E-value=4e-24 Score=174.14 Aligned_cols=130 Identities=15% Similarity=0.101 Sum_probs=108.9
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
+++||+++||||++|||+++|++|+++|++|++++|++++++++.+++ +.++.++++|++|++++++.+ ++++
T Consensus 2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 80 (254)
T d1hdca_ 2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-GDAARYQHLDVTIEEDWQRVVAYAREEFGSV 80 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-GGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-CCceEEEEcccCCHHHHHHHHHHHHHHcCCc
Confidence 578999999999999999999999999999999999999998877766 356889999999999998743 6799
Q ss_pred cEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEccccccccC
Q 028043 153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 153 d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~~ 209 (214)
|+||||||...... ...+++++.+++|+.|++++++++ +++.++||++||.++..+.
T Consensus 81 DilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~ 145 (254)
T d1hdca_ 81 DGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGL 145 (254)
T ss_dssp CEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC
T ss_pred cEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccc
Confidence 99999999876322 233445677899999999999876 2356899999999886543
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.90 E-value=3.2e-24 Score=173.76 Aligned_cols=131 Identities=15% Similarity=0.104 Sum_probs=107.8
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
++++||+++||||++|||+++|++|+++|++|++++|++++++++.+++. +.++..+.+|++|+++++..+ +
T Consensus 3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~ 82 (244)
T d1yb1a_ 3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI 82 (244)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence 56899999999999999999999999999999999999999888766543 457889999999999988633 6
Q ss_pred CCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
+++|++|||||...... .+.+.+++.+++|+.|+.++++++ +++.++||++||.++..+
T Consensus 83 g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~ 149 (244)
T d1yb1a_ 83 GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVS 149 (244)
T ss_dssp CCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCC
T ss_pred CCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCC
Confidence 78999999999876322 112234677899999999999866 345679999999988643
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=99.90 E-value=2.2e-24 Score=174.56 Aligned_cols=129 Identities=19% Similarity=0.171 Sum_probs=108.1
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
+++||+++||||++|||+++|++|+++|++|++++|++++++++.+++. .+...+.+|++|++++++.+ ++++
T Consensus 1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 79 (243)
T d1q7ba_ 1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLG-ANGKGLMLNVTDPASIESVLEKIRAEFGEV 79 (243)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG-GGEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC-CCCcEEEEEecCHHHhhhhhhhhhcccCCc
Confidence 4689999999999999999999999999999999999999988877663 46788999999999988743 6789
Q ss_pred cEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 153 d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
|+||||||...... .+.+++++.+++|+.|++++++++ +++.++||++||.++..+
T Consensus 80 DilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~ 143 (243)
T d1q7ba_ 80 DILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMG 143 (243)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC
T ss_pred ceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCC
Confidence 99999999876332 233455677899999999999976 235679999999987653
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.90 E-value=5.3e-24 Score=173.48 Aligned_cols=130 Identities=10% Similarity=0.122 Sum_probs=108.4
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
|.++||+++||||++|||+++|++|+++|++|++++|++++++++.+++ +.++..+.+|++|++++++++ +++
T Consensus 1 M~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~-~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~ 79 (256)
T d1k2wa_ 1 MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI-GPAACAIALDVTDQASIDRCVAELLDRWGS 79 (256)
T ss_dssp CTTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH-CTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-CCceEEEEeeCCCHHHHHHHHHHHHHHhCC
Confidence 3478999999999999999999999999999999999999998887777 457889999999999998743 679
Q ss_pred CcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----cc-CCCeEEEEcccccccc
Q 028043 152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PS-SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~-~~~~iV~vSS~~~~~~ 208 (214)
+|+||||||...... .+.++++..+++|+.|++++++++ +. ..++||++||.++..+
T Consensus 80 iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~ 145 (256)
T d1k2wa_ 80 IDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRG 145 (256)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC
T ss_pred ccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccc
Confidence 999999999875322 233445677899999999999864 22 3579999999988654
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.90 E-value=6e-24 Score=172.13 Aligned_cols=130 Identities=18% Similarity=0.191 Sum_probs=108.4
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
..++||+++||||++|||+++|++|+++|++|++++|++++++++.+++. .++.++++|++|++++++.+ +++
T Consensus 2 G~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 80 (244)
T d1nffa_ 2 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA-DAARYVHLDVTQPAQWKAAVDTAVTAFGG 80 (244)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG-GGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh-CcceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 35789999999999999999999999999999999999999988877763 56788999999999988743 678
Q ss_pred CcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
+|+||||||...... .+.+++++.+++|+.|++++++++ +++.++||++||.++..+
T Consensus 81 idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~ 145 (244)
T d1nffa_ 81 LHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAG 145 (244)
T ss_dssp CCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC
T ss_pred CeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccc
Confidence 999999999875322 233445678899999999999865 235679999999988654
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=99.90 E-value=1e-23 Score=171.40 Aligned_cols=128 Identities=19% Similarity=0.195 Sum_probs=104.5
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC---CCCEEEEEecCCChhccchhh------h
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
+++||+++||||++|||+++|++|+++|++|++++|+++++++..+++. +.++.++++|++|++++++.+ +
T Consensus 2 ~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 81 (251)
T d1vl8a_ 2 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKF 81 (251)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4689999999999999999999999999999999999988776654432 456888999999999988743 6
Q ss_pred CCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccc
Q 028043 150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVT 206 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~ 206 (214)
+++|+||||||...... .+.+++++.+++|+.|++++++++ +++.++||++||..+.
T Consensus 82 g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~ 146 (251)
T d1vl8a_ 82 GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVE 146 (251)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGT
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhc
Confidence 79999999999865322 233455677899999999999876 2355799999997653
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=99.90 E-value=1.2e-23 Score=170.91 Aligned_cols=130 Identities=15% Similarity=0.155 Sum_probs=106.8
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC-CCCEEEEEecCCChhccchhh------hCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
.++||+++||||++|||+++|++|+++|++|++++|+++.++++.+++. ..++.++++|++|++++++.+ +++
T Consensus 3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~ 82 (251)
T d1zk4a1 3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGP 82 (251)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 4789999999999999999999999999999999999999888776664 457889999999999988743 679
Q ss_pred CcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh----c-cCC-CeEEEEcccccccc
Q 028043 152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSL-KRIVLVSSVGVTKF 208 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~----~-~~~-~~iV~vSS~~~~~~ 208 (214)
+|+||||||...... .+.+++++.+++|+.|++++++++ + ++. ++||++||.++..+
T Consensus 83 iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~ 148 (251)
T d1zk4a1 83 VSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVG 148 (251)
T ss_dssp CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSC
T ss_pred ceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceecc
Confidence 999999999875322 222334667899999999999875 2 233 48999999987643
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=99.90 E-value=8.6e-24 Score=172.49 Aligned_cols=129 Identities=15% Similarity=0.173 Sum_probs=105.9
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhccc----CCCCEEEEEecCCChhccchhh------h
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ----DEETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
++||+++||||++|||++++++|+++|++|++++|+++++++..+++ .+.++..+++|++|++++++.+ +
T Consensus 2 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 81 (258)
T d1iy8a_ 2 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF 81 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHh
Confidence 57999999999999999999999999999999999998887654433 2457888999999999988743 6
Q ss_pred CCCcEEEeccCCCCCC--C--CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 150 EGVTHVICCTGTTAFP--S--RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~--~--~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
+++|+||||||+.... . .+.+++++.+++|+.|++++++++ +++.++||++||.++..+
T Consensus 82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~ 149 (258)
T d1iy8a_ 82 GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRG 149 (258)
T ss_dssp SCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSB
T ss_pred CCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccC
Confidence 7999999999976421 1 233455778899999999999876 236689999999988654
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=99.90 E-value=5.7e-24 Score=173.26 Aligned_cols=131 Identities=10% Similarity=0.127 Sum_probs=107.8
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
+.++||+++||||++|||+++|++|+++|++|++++|++++++++.+++. +.++.++++|++|++++++.+ +
T Consensus 7 m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~ 86 (255)
T d1fmca_ 7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL 86 (255)
T ss_dssp GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 56789999999999999999999999999999999999998888766554 457888999999999988643 6
Q ss_pred CCCcEEEeccCCCCCCC--CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 150 EGVTHVICCTGTTAFPS--RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~--~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
+++|+||||||...... ...+++++.+++|+.|++++++++ +.+.++||++||.++..+
T Consensus 87 g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~ 152 (255)
T d1fmca_ 87 GKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENK 152 (255)
T ss_dssp SSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC
T ss_pred CCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhcc
Confidence 79999999999875322 122344667799999999999866 235568999999987654
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.89 E-value=1.4e-23 Score=169.76 Aligned_cols=129 Identities=16% Similarity=0.095 Sum_probs=106.8
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh--hCCCcEE
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--FEGVTHV 155 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~--~~~~d~l 155 (214)
++++||+++||||++|||++++++|+++|++|++++|++++++++.+++. ++..+.+|++|++++++++ ++++|+|
T Consensus 1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~g~iDil 78 (242)
T d1cyda_ 1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP--GIEPVCVDLGDWDATEKALGGIGPVDLL 78 (242)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST--TCEEEECCTTCHHHHHHHHTTCCCCSEE
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcC--CCeEEEEeCCCHHHHHHHHHHcCCCeEE
Confidence 46789999999999999999999999999999999999999888776653 5778999999999998754 5789999
Q ss_pred EeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----c-cCCCeEEEEcccccccc
Q 028043 156 ICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----P-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 156 i~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~-~~~~~iV~vSS~~~~~~ 208 (214)
|||||...... .+.++++..+++|+.|++++++++ + ...++||++||.++..+
T Consensus 79 VnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~ 140 (242)
T d1cyda_ 79 VNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVT 140 (242)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC
T ss_pred EECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhcccc
Confidence 99999865322 233445677899999999998865 1 24469999999987654
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.89 E-value=8e-24 Score=171.99 Aligned_cols=131 Identities=15% Similarity=0.163 Sum_probs=108.4
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
.++.+|+++||||++|||+++|++|+++|++|++++|++++++++.+++. +.++..+++|++|++++++.+ +
T Consensus 6 f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 85 (251)
T d2c07a1 6 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH 85 (251)
T ss_dssp CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Confidence 56789999999999999999999999999999999999999888766554 446889999999999988743 6
Q ss_pred CCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
+++|+||||||...... ...+++++.+++|+.|++++++++ +++.++||++||.++..+
T Consensus 86 g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~ 152 (251)
T d2c07a1 86 KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTG 152 (251)
T ss_dssp SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC
T ss_pred CCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCC
Confidence 79999999999876322 222345677899999999999866 245689999999988643
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=99.89 E-value=1.7e-23 Score=170.80 Aligned_cols=131 Identities=16% Similarity=0.164 Sum_probs=107.5
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
.+++||+++||||++|||+++|++|+++|++|++++|++++++++.+++. +.++.++.+|++|++++++++ +
T Consensus 4 f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 83 (259)
T d2ae2a_ 4 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF 83 (259)
T ss_dssp TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHh
Confidence 46789999999999999999999999999999999999999888766554 456788999999999888643 4
Q ss_pred C-CCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 150 E-GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 150 ~-~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
+ ++|+||||||...... .+.+++++.+++|+.|++++++++ +.+.++||++||.++..+
T Consensus 84 ~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~ 151 (259)
T d2ae2a_ 84 HGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALA 151 (259)
T ss_dssp TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSC
T ss_pred CCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccc
Confidence 5 6999999999875322 233445678899999999999866 235679999999987643
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=99.89 E-value=1.2e-23 Score=171.75 Aligned_cols=131 Identities=16% Similarity=0.138 Sum_probs=107.7
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
.++||+++||||++|||++++++|+++|++|++++|++++++++.+++. +.++..+.+|++|++++++.+ ++
T Consensus 2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 81 (260)
T d1zema1 2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG 81 (260)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 3689999999999999999999999999999999999998888766554 456888999999999988743 67
Q ss_pred CCcEEEeccCCCCC-C---CCCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEccccccccC
Q 028043 151 GVTHVICCTGTTAF-P---SRRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 151 ~~d~li~~Ag~~~~-~---~~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~~ 209 (214)
++|+||||||.... . ..+.+++...+++|+.+++++++++ +++.++||++||.++..+.
T Consensus 82 ~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~ 149 (260)
T d1zema1 82 KIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGP 149 (260)
T ss_dssp CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCC
T ss_pred CCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCC
Confidence 99999999997642 1 1333455677899999999999876 2356799999999876543
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.89 E-value=4e-23 Score=167.01 Aligned_cols=126 Identities=14% Similarity=0.094 Sum_probs=102.5
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
|.++||+++||||++|||+++|++|+++|++|++++|+++++++..+++ +.+.+.+|++|++++++++ +++
T Consensus 1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~---~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 77 (242)
T d1ulsa_ 1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV---GAHPVVMDVADPASVERGFAEALAHLGR 77 (242)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---TCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCeEEEEecCCHHHHHHHHHHHHHhcCC
Confidence 4578999999999999999999999999999999999999988877654 4678999999999998743 678
Q ss_pred CcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh----c-cCCCeEEEEcccccc
Q 028043 152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVT 206 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~----~-~~~~~iV~vSS~~~~ 206 (214)
+|+||||||...... .+.+++++.+++|+.|++++++++ + .+.+.++++||.+..
T Consensus 78 iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~ 140 (242)
T d1ulsa_ 78 LDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYL 140 (242)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGG
T ss_pred ceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeecccccc
Confidence 999999999875322 333455778899999999999876 2 244567777776543
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=99.89 E-value=1e-23 Score=172.09 Aligned_cols=129 Identities=11% Similarity=0.060 Sum_probs=104.2
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcC-hhHHHHHhcccC---CCCEEEEEecCCChhccchhh------h
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD-PEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~-~~~~~~~~~~~~---~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
++||+++||||++|||+++|++|+++|++|++++|+ .+.++++.+++. +.++.++++|++|++++++.+ +
T Consensus 2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 81 (260)
T d1x1ta1 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM 81 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 679999999999999999999999999999999997 455555443332 457889999999999998743 6
Q ss_pred CCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
+++|+||||||...... .+.+++.+.+++|+.|++++++++ +++.++||++||.++..+
T Consensus 82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~ 148 (260)
T d1x1ta1 82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVA 148 (260)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC
T ss_pred CCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceec
Confidence 79999999999875322 233445678899999999998876 235679999999988654
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=99.89 E-value=2.3e-23 Score=168.90 Aligned_cols=130 Identities=13% Similarity=0.166 Sum_probs=104.0
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHH-HHHhcccCCCCEEEEEecCCChhccchhh------hCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA-TTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
.++||+++||||++|||+++|++|+++|++|++++|++++. ++..+.. +.++..+++|++|++++++.+ +++
T Consensus 2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~-g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~ 80 (247)
T d2ew8a1 2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNL-GRRVLTVKCDVSQPGDVEAFGKQVISTFGR 80 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHT-TCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHc-CCcEEEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence 36899999999999999999999999999999999986433 3333322 567889999999999998743 679
Q ss_pred CcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEccccccccC
Q 028043 152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~~ 209 (214)
+|+||||||...... .+.+++++.+++|+.|++++++++ +++.++||++||.++..+.
T Consensus 81 iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~ 146 (247)
T d2ew8a1 81 CDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKI 146 (247)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCC
T ss_pred CCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccC
Confidence 999999999875322 333456778899999999999876 2356799999999886543
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.89 E-value=3.2e-23 Score=167.76 Aligned_cols=130 Identities=15% Similarity=0.122 Sum_probs=107.7
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh--hCCCcEE
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--FEGVTHV 155 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~--~~~~d~l 155 (214)
+.++||+++||||++|||+++|++|+++|++|++++|++++++++.+++. ++..+.+|++|++++++.+ ++++|+|
T Consensus 3 ~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~g~iDil 80 (244)
T d1pr9a_ 3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP--GIEPVCVDLGDWEATERALGSVGPVDLL 80 (244)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST--TCEEEECCTTCHHHHHHHHTTCCCCCEE
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC--CCeEEEEeCCCHHHHHHHHHHhCCceEE
Confidence 45789999999999999999999999999999999999999988877654 5778999999999998754 5789999
Q ss_pred EeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----c-cCCCeEEEEccccccccC
Q 028043 156 ICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----P-SSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 156 i~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~-~~~~~iV~vSS~~~~~~~ 209 (214)
|||||...... .+.++++..+++|+.+++++++++ + ...++||++||.++..+.
T Consensus 81 VnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~ 143 (244)
T d1pr9a_ 81 VNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAV 143 (244)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC
T ss_pred EeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccc
Confidence 99999876322 233455677899999999988865 2 245799999999886543
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.89 E-value=2e-23 Score=169.58 Aligned_cols=128 Identities=17% Similarity=0.201 Sum_probs=106.5
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
.++||+++||||++|||++++++|+++|++|++++|+++.++++.+++. ++.++.+|++|++++++.+ ++++
T Consensus 3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~--~~~~~~~Dvs~~~~v~~~~~~~~~~~g~i 80 (250)
T d1ydea1 3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP--GAVFILCDVTQEDDVKTLVSETIRRFGRL 80 (250)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT--TEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcC--CCeEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 4689999999999999999999999999999999999999988877653 5788999999999988743 6799
Q ss_pred cEEEeccCCCCCCC----CCCCCCCchhHHHHHHHHHHHHHh----ccCCCeEEEEcccccccc
Q 028043 153 THVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 153 d~li~~Ag~~~~~~----~~~~~~~~~~~vNv~g~~~l~~a~----~~~~~~iV~vSS~~~~~~ 208 (214)
|+||||||...... .+.+++++.+++|+.|++++++++ +++.++||++||.++..+
T Consensus 81 DilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~~ 144 (250)
T d1ydea1 81 DCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIG 144 (250)
T ss_dssp CEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHC
T ss_pred CEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCccccccccccc
Confidence 99999999764221 233445677899999999999876 334479999999987643
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.89 E-value=2.3e-23 Score=169.43 Aligned_cols=129 Identities=19% Similarity=0.139 Sum_probs=107.7
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
.++||+++||||++|||++++++|+++|++|++++|++++++++.+++. .+..++++|++|++++++.+ ++++
T Consensus 3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 81 (253)
T d1hxha_ 3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELG-ERSMFVRHDVSSEADWTLVMAAVQRRLGTL 81 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC-TTEEEECCCTTCHHHHHHHHHHHHHHHCSC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC-CCeEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence 4789999999999999999999999999999999999999988877774 56778999999999988743 6799
Q ss_pred cEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh----ccCCCeEEEEcccccccc
Q 028043 153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 153 d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~----~~~~~~iV~vSS~~~~~~ 208 (214)
|+||||||...... .+.+++++.+++|+.|++++++++ ++..++||++||.++..+
T Consensus 82 DilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~~ 144 (253)
T d1hxha_ 82 NVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLP 144 (253)
T ss_dssp CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSC
T ss_pred CeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhcC
Confidence 99999999875322 233445678899999999988876 344579999999988654
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.89 E-value=2.3e-23 Score=169.68 Aligned_cols=128 Identities=16% Similarity=0.165 Sum_probs=105.8
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCCC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
.||++|||||++|||+++|++|+++|++|++++|++++++++.+++. +.++..+++|++|++++++.+ ++++
T Consensus 1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~i 80 (257)
T d2rhca1 1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV 80 (257)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence 37999999999999999999999999999999999998888766554 456889999999999988743 6789
Q ss_pred cEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhcc-------CCCeEEEEcccccccc
Q 028043 153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS-------SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 153 d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~-------~~~~iV~vSS~~~~~~ 208 (214)
|+||||||...... .+.+++++.+++|+.|++++++++.+ +.++||++||.++..+
T Consensus 81 DilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~ 146 (257)
T d2rhca1 81 DVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQG 146 (257)
T ss_dssp SEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSC
T ss_pred CEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccc
Confidence 99999999875322 23344567889999999999997632 3468999999988654
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=99.89 E-value=5.3e-23 Score=168.50 Aligned_cols=130 Identities=12% Similarity=0.181 Sum_probs=106.9
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC-CCCEEEEEecCCChhccchhh------hCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
.++||+++||||++|||+++|++|+++|++|++++|++++++++.+++. ...+.++.+|++|++++++++ +++
T Consensus 3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 82 (268)
T d2bgka1 3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGK 82 (268)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4789999999999999999999999999999999999999988877765 345778999999999998743 679
Q ss_pred CcEEEeccCCCCCCC-----CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 152 VTHVICCTGTTAFPS-----RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~-----~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
+|++|||||...... ...++++..+++|+.|++++++++ +++.++||++||.++...
T Consensus 83 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~ 149 (268)
T d2bgka1 83 LDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTA 149 (268)
T ss_dssp CCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCC
T ss_pred cceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCcccccccccccc
Confidence 999999999865321 122344667799999999999866 235679999999887653
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=99.89 E-value=2.7e-23 Score=168.56 Aligned_cols=127 Identities=18% Similarity=0.089 Sum_probs=101.7
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
.++||++|||||++|||++++++|+++|++|++++|+++..+. .+.. +..++++|++|++++++.+ ++++
T Consensus 2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~-~~~~---~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i 77 (248)
T d2d1ya1 2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEV-AEAI---GGAFFQVDLEDERERVRFVEEAAYALGRV 77 (248)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHH-HHHH---TCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHc---CCeEEEEeCCCHHHHHHHHHHHHHhcCCC
Confidence 4689999999999999999999999999999999999876543 3322 3567899999999988743 6799
Q ss_pred cEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEccccccccC
Q 028043 153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 153 d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~~ 209 (214)
|+||||||...... .+.+++++.+++|+.|++++++++ +++.++||++||.++..+.
T Consensus 78 DiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~ 142 (248)
T d2d1ya1 78 DVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAE 142 (248)
T ss_dssp CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBC
T ss_pred CeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccc
Confidence 99999999875322 223345667899999999999976 2355799999999886543
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.88 E-value=3.3e-23 Score=169.05 Aligned_cols=131 Identities=16% Similarity=0.131 Sum_probs=100.3
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
-+++||+++||||++|||+++|++|+++|++|++++|++++++++.+++. ..++..+.+|++|++++++.+ +
T Consensus 4 F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 83 (259)
T d1xq1a_ 4 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMF 83 (259)
T ss_dssp TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHh
Confidence 46789999999999999999999999999999999999999888766543 456889999999999887633 4
Q ss_pred -CCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 150 -EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 150 -~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
+.+|+||||||...... .+.+++++.+++|+.|++++++++ +++.++||++||.++..+
T Consensus 84 ~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~ 151 (259)
T d1xq1a_ 84 GGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVS 151 (259)
T ss_dssp TTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC-------
T ss_pred CCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccccccc
Confidence 46999999999875322 233445677899999999999876 235689999999987643
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.88 E-value=5.7e-23 Score=167.43 Aligned_cols=129 Identities=20% Similarity=0.193 Sum_probs=104.9
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC----CCCEEEEEecCCChhccchhh------
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
.+++|++|||||++|||+++|++|+++|++|++++|++++++++.+++. ..++.++++|++|++++++.+
T Consensus 7 ~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~ 86 (257)
T d1xg5a_ 7 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ 86 (257)
T ss_dssp GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHh
Confidence 3789999999999999999999999999999999999999888766543 246788999999999988743
Q ss_pred hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----cc--CCCeEEEEccccccc
Q 028043 149 FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PS--SLKRIVLVSSVGVTK 207 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~--~~~~iV~vSS~~~~~ 207 (214)
++++|+||||||...... ...+.++..+++|+.|++++.+++ +. ..++||++||.++..
T Consensus 87 ~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~ 155 (257)
T d1xg5a_ 87 HSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHR 155 (257)
T ss_dssp HCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTS
T ss_pred cCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcC
Confidence 679999999999875322 223344667799999999988765 22 247999999998754
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=99.88 E-value=6.4e-23 Score=166.89 Aligned_cols=126 Identities=14% Similarity=0.137 Sum_probs=103.0
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCCCcE
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGVTH 154 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~~d~ 154 (214)
|+++||||++|||+++|++|+++|++|++++|++++++++.+++. +.++..+++|++|++++++.+ ++++|+
T Consensus 2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi 81 (255)
T d1gega_ 2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV 81 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence 678999999999999999999999999999999999888766553 457888999999999988743 679999
Q ss_pred EEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----cc-CCCeEEEEcccccccc
Q 028043 155 VICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PS-SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 155 li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~-~~~~iV~vSS~~~~~~ 208 (214)
||||||...... .+.+++++.+++|+.|++++++++ +. ..++||++||.++..+
T Consensus 82 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~ 144 (255)
T d1gega_ 82 IVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVG 144 (255)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC
T ss_pred EEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhccc
Confidence 999999865322 233445678899999999999875 22 3467999999987644
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=99.88 E-value=6.8e-23 Score=167.39 Aligned_cols=131 Identities=18% Similarity=0.159 Sum_probs=103.2
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChh-HHHHHhcccC--CCCEEEEEecCCChhccchhh------
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-KATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
.+++||+++||||++|||+++|++|+++|++|++++|+.+ .++++.+++. +.++..+++|++|++++++++
T Consensus 3 ~dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~ 82 (261)
T d1geea_ 3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKE 82 (261)
T ss_dssp GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 3578999999999999999999999999999999999854 4555544433 456788999999999988743
Q ss_pred hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccC-CCeEEEEcccccccc
Q 028043 149 FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSS-LKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~-~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||...... .+.+++++.+++|+.|++++++++ +++ .+.||++||.++..+
T Consensus 83 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~ 151 (261)
T d1geea_ 83 FGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIP 151 (261)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC
T ss_pred hCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhccc
Confidence 679999999999875322 233445677899999999998865 233 346999999987643
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=99.87 E-value=2.9e-22 Score=164.79 Aligned_cols=130 Identities=18% Similarity=0.234 Sum_probs=105.3
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
|.++||+++||||++|||+++|++|+++|++|++++|++++++++.+++ +.++..+.+|++|++++++++ +++
T Consensus 1 M~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 79 (276)
T d1bdba_ 1 MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH-GDNVLGIVGDVRSLEDQKQAASRCVARFGK 79 (276)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-GGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-CCCeeEEecccccHHHHHHHHHHHHHHhCC
Confidence 4578999999999999999999999999999999999999988876665 356889999999999988743 679
Q ss_pred CcEEEeccCCCCCCCC----CCC----CCCchhHHHHHHHHHHHHHh----ccCCCeEEEEcccccccc
Q 028043 152 VTHVICCTGTTAFPSR----RWD----GDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~~----~~~----~~~~~~~vNv~g~~~l~~a~----~~~~~~iV~vSS~~~~~~ 208 (214)
+|++|||||....... ..+ .+++.+++|+.|++++++++ ++..++||+++|.++..+
T Consensus 80 idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~g~iI~i~S~~~~~~ 148 (276)
T d1bdba_ 80 IDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFYP 148 (276)
T ss_dssp CCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTST
T ss_pred cccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcCCCceeeeechhccC
Confidence 9999999998653221 111 13567899999999998876 333478999999877543
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.87 E-value=7.3e-23 Score=164.97 Aligned_cols=122 Identities=19% Similarity=0.196 Sum_probs=97.6
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
++++||+++||||++|||++++++|+++|++|++++|+.+..+ ++..+++|++|++++++.+ +++
T Consensus 3 psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~---------~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 73 (237)
T d1uzma1 3 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK---------GLFGVEVDVTDSDAVDRAFTAVEEHQGP 73 (237)
T ss_dssp CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT---------TSEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhc---------CceEEEEecCCHHHHHHHHHHHHHhcCC
Confidence 5689999999999999999999999999999999999876533 3567899999999988743 678
Q ss_pred CcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 152 VTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
+|+||||||...... .+.+++++.+++|+.+++.+++++ +++.++||++||.++..+
T Consensus 74 iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~ 138 (237)
T d1uzma1 74 VEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWG 138 (237)
T ss_dssp CSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC---
T ss_pred ceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccC
Confidence 999999999865322 233445677899999999998865 345579999999988643
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.87 E-value=5e-22 Score=161.47 Aligned_cols=123 Identities=15% Similarity=0.142 Sum_probs=101.6
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC----CCCEEEEEecCCChhccchhh------hC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAI------FE 150 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~v~~Di~d~~~v~~~~------~~ 150 (214)
+||+++||||++|||+++|++|+++|++|++++|+.+++++..+++. +.++.++.+|++|++++++.+ ++
T Consensus 2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 81 (254)
T d2gdza1 2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG 81 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence 68999999999999999999999999999999999998877655442 346888999999999988743 67
Q ss_pred CCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHh----c-cC---CCeEEEEcccccccc
Q 028043 151 GVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL----P-SS---LKRIVLVSSVGVTKF 208 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~----~-~~---~~~iV~vSS~~~~~~ 208 (214)
++|+||||||.... +++++.+++|+.+++++.+++ + .. .++||++||.++..+
T Consensus 82 ~iDilVnnAg~~~~-----~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~ 142 (254)
T d2gdza1 82 RLDILVNNAGVNNE-----KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMP 142 (254)
T ss_dssp CCCEEEECCCCCCS-----SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC
T ss_pred CcCeeccccccccc-----ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccC
Confidence 99999999998742 345678899999998887755 2 21 257999999988654
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=99.87 E-value=1.1e-22 Score=164.09 Aligned_cols=127 Identities=15% Similarity=0.186 Sum_probs=104.0
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCe-------EEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh-----
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIK-------SRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI----- 148 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~-------V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~----- 148 (214)
++||||||++|||+++|++|+++|++ |++.+|++++++++.+++. +.++..+.+|++|++++++.+
T Consensus 2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~ 81 (240)
T d2bd0a1 2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE 81 (240)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 35899999999999999999999998 8999999999888766554 456788999999999988743
Q ss_pred -hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEccccccccC
Q 028043 149 -FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 149 -~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~~ 209 (214)
++++|+||||||...... .+.+++++.+++|+.|++++++++ +++.++||++||.++..+.
T Consensus 82 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~ 151 (240)
T d2bd0a1 82 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAF 151 (240)
T ss_dssp HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC
T ss_pred HcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCC
Confidence 679999999999876322 233455778899999999999876 2356799999999886543
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.86 E-value=3.7e-22 Score=164.01 Aligned_cols=128 Identities=14% Similarity=0.177 Sum_probs=102.4
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC-----CCCEEEEEecCCChhccchhh------
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-----EETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
++||+++||||++|||+++|++|+++|++|++++|++++++++.+++. ..++..+.+|++|++++++.+
T Consensus 2 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 81 (274)
T d1xhla_ 2 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK 81 (274)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHH
Confidence 579999999999999999999999999999999999998887765542 236889999999999988743
Q ss_pred hCCCcEEEeccCCCCCCC-----CCCCCCCchhHHHHHHHHHHHHHh----c-cCCCeEEEEccccccc
Q 028043 149 FEGVTHVICCTGTTAFPS-----RRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~~-----~~~~~~~~~~~vNv~g~~~l~~a~----~-~~~~~iV~vSS~~~~~ 207 (214)
++++|++|||||...... ...+++++.+++|+.|++++++++ + .+.++|+++||.++..
T Consensus 82 ~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~ 150 (274)
T d1xhla_ 82 FGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQ 150 (274)
T ss_dssp HSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSS
T ss_pred cCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccc
Confidence 679999999999764322 122335667899999999999876 2 3456788888877644
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.86 E-value=3.9e-22 Score=163.63 Aligned_cols=128 Identities=19% Similarity=0.197 Sum_probs=99.8
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC-----CCCEEEEEecCCChhccchhh-----
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-----EETLQVCKGDTRNPKDLDPAI----- 148 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~v~~Di~d~~~v~~~~----- 148 (214)
.++||+++||||++|||+++|++|+++|++|++++|++++++++.+++. ..++..+++|++|++++++.+
T Consensus 2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~ 81 (272)
T d1xkqa_ 2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK 81 (272)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999999998887766543 235889999999999988743
Q ss_pred -hCCCcEEEeccCCCCCCC---CCCC----CCCchhHHHHHHHHHHHHHh----ccCCCeEEEEccc-ccc
Q 028043 149 -FEGVTHVICCTGTTAFPS---RRWD----GDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSV-GVT 206 (214)
Q Consensus 149 -~~~~d~li~~Ag~~~~~~---~~~~----~~~~~~~vNv~g~~~l~~a~----~~~~~~iV~vSS~-~~~ 206 (214)
++++|+||||||...... ..++ .+.+.+++|+.|++++++++ +++.+.+|+++|. ++.
T Consensus 82 ~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~ 152 (272)
T d1xkqa_ 82 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGP 152 (272)
T ss_dssp HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSS
T ss_pred HhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccc
Confidence 679999999999875321 1111 23556789999999999876 2334566666664 443
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=99.86 E-value=6.7e-22 Score=161.14 Aligned_cols=131 Identities=15% Similarity=0.145 Sum_probs=106.8
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------h-
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------F- 149 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~- 149 (214)
+++||+++||||++|||++++++|+++|++|++++|++++++++.+++. +..+.++.+|++|++++++.+ +
T Consensus 3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~ 82 (258)
T d1ae1a_ 3 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFD 82 (258)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhC
Confidence 5789999999999999999999999999999999999998888766554 456788999999999987633 4
Q ss_pred CCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEccccccccC
Q 028043 150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~~ 209 (214)
+.+|+||||||...... ...+++.+.+++|+.+++.+.+++ +...++||++||.++..+.
T Consensus 83 g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~ 150 (258)
T d1ae1a_ 83 GKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSAL 150 (258)
T ss_dssp SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCC
T ss_pred CCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccccccccccccccccccc
Confidence 46999999999875322 223345677899999999998876 2366799999999886543
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.86 E-value=6.7e-22 Score=164.26 Aligned_cols=128 Identities=15% Similarity=0.205 Sum_probs=102.8
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC-------CCCEEEEEecCCChhccchhh--
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-------EETLQVCKGDTRNPKDLDPAI-- 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-------~~~~~~v~~Di~d~~~v~~~~-- 148 (214)
..++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++. +.++..+.+|++|++++++++
T Consensus 8 g~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~ 87 (297)
T d1yxma1 8 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS 87 (297)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHH
Confidence 56899999999999999999999999999999999999988776554331 456888999999999988743
Q ss_pred ----hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc-----cCCCeEEEEccccc
Q 028043 149 ----FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP-----SSLKRIVLVSSVGV 205 (214)
Q Consensus 149 ----~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~-----~~~~~iV~vSS~~~ 205 (214)
++++|+||||||...... ...+++++.+++|+.|++++++++. .+.++||++||...
T Consensus 88 ~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~ 156 (297)
T d1yxma1 88 TLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTK 156 (297)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCT
T ss_pred HHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccccccccccccccc
Confidence 679999999999865322 2334456778999999999998762 24567888877544
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.86 E-value=4.4e-22 Score=162.60 Aligned_cols=126 Identities=17% Similarity=0.225 Sum_probs=98.1
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC-----CCCEEEEEecCCChhccchhh------
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-----EETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
++||+++||||++|||+++|++|+++|++|++++|++++++++.+++. ..++..+++|++|++++++.+
T Consensus 3 l~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~ 82 (264)
T d1spxa_ 3 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK 82 (264)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 679999999999999999999999999999999999998887765542 245889999999999988743
Q ss_pred hCCCcEEEeccCCCCCCC-------CCCCCCCchhHHHHHHHHHHHHHh----ccCCCeEEEEccccc
Q 028043 149 FEGVTHVICCTGTTAFPS-------RRWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGV 205 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~~-------~~~~~~~~~~~vNv~g~~~l~~a~----~~~~~~iV~vSS~~~ 205 (214)
++++|+||||||...... .+.++++..+++|+.|++++++++ ++..+++|+++|..+
T Consensus 83 ~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~ 150 (264)
T d1spxa_ 83 FGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIAS 150 (264)
T ss_dssp HSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTS
T ss_pred hCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeecc
Confidence 679999999999864211 122334567899999999999876 234467777777654
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.86 E-value=2.7e-22 Score=162.25 Aligned_cols=126 Identities=19% Similarity=0.174 Sum_probs=101.1
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEE-cChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCCCc
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLL-RDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEGVT 153 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~-r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~~d 153 (214)
++|+||||++|||+++|++|+++|++|++.+ |+++.++++.+++. +.++.++++|++|++++++++ ++++|
T Consensus 2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 81 (244)
T d1edoa_ 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID 81 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 5899999999999999999999999999875 56666666655443 457888999999999988743 67999
Q ss_pred EEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 154 HVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 154 ~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
+||||||...... .+.+++++.+++|+.|++++++++ +++.++||++||.++..+
T Consensus 82 iLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~ 144 (244)
T d1edoa_ 82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIG 144 (244)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC
T ss_pred ccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCC
Confidence 9999999876322 333455678899999999999876 245689999999987643
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=99.85 E-value=3.4e-22 Score=162.93 Aligned_cols=129 Identities=18% Similarity=0.219 Sum_probs=102.3
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC---CCCEEEEEecCCChhccchhh------
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++. +.++..+++|++|++++++.+
T Consensus 5 m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 84 (260)
T d1h5qa_ 5 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDAD 84 (260)
T ss_dssp ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 56889999999999999999999999999999999999887766544331 457889999999999988743
Q ss_pred hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----c-cCCCeEEEEcccccc
Q 028043 149 FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----P-SSLKRIVLVSSVGVT 206 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~-~~~~~iV~vSS~~~~ 206 (214)
++++|+||||||...... ...+++++.+++|+.|++++++++ + ...++|+.++|....
T Consensus 85 ~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~ 151 (260)
T d1h5qa_ 85 LGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQ 151 (260)
T ss_dssp SCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT
T ss_pred hCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccc
Confidence 678999999999865322 233445667899999999988865 1 244577777776654
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=99.85 E-value=1.3e-21 Score=158.97 Aligned_cols=126 Identities=18% Similarity=0.181 Sum_probs=99.5
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHH---hcccCCCCEEEEEecCC-Chhccchhh-----
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTL---FGKQDEETLQVCKGDTR-NPKDLDPAI----- 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~---~~~~~~~~~~~v~~Di~-d~~~v~~~~----- 148 (214)
++++||+|+||||++|||+++|++|+++|++|++++|+.++.+++ .......++.++.+|++ +.+++++.+
T Consensus 1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 80 (254)
T d1sbya1 1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD 80 (254)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence 457899999999999999999999999999999998876554433 33333567889999998 555666532
Q ss_pred -hCCCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHh-----cc---CCCeEEEEcccccccc
Q 028043 149 -FEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-----PS---SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 -~~~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~-----~~---~~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||... .+.+++.+++|+.|++++++++ ++ ..++||++||.+++.+
T Consensus 81 ~~g~iDilvnnAG~~~-----~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~ 144 (254)
T d1sbya1 81 QLKTVDILINGAGILD-----DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNA 144 (254)
T ss_dssp HHSCCCEEEECCCCCC-----TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC
T ss_pred HcCCCCEEEeCCCCCC-----HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccC
Confidence 679999999999753 3456778999999999999866 11 2368999999998654
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.85 E-value=1.7e-22 Score=165.86 Aligned_cols=125 Identities=18% Similarity=0.230 Sum_probs=99.9
Q ss_pred CC-EEEEEcCchHHHHHHHHHHHHC-CCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------hCC
Q 028043 82 SK-LVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------FEG 151 (214)
Q Consensus 82 ~k-~vlITGasggIG~~la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------~~~ 151 (214)
|| +++||||++|||+++|++|+++ |++|++.+|+++++++..+++. +.++.++++|++|.+++++++ +++
T Consensus 2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~ 81 (275)
T d1wmaa1 2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG 81 (275)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCC
Confidence 44 4599999999999999999985 9999999999999888766554 457889999999999988743 678
Q ss_pred CcEEEeccCCCCCCCCC---CCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEcccccc
Q 028043 152 VTHVICCTGTTAFPSRR---WDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVT 206 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~~~---~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~ 206 (214)
+|+||||||+....... .++.+..+++|+.|++++++++.+ ..++||++||.++.
T Consensus 82 iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~ 142 (275)
T d1wmaa1 82 LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSV 142 (275)
T ss_dssp EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHH
T ss_pred cEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccee
Confidence 99999999987532211 112345678999999999998743 23689999998764
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=99.84 E-value=4.9e-21 Score=154.44 Aligned_cols=127 Identities=16% Similarity=0.173 Sum_probs=102.5
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
.++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++. .++.++++|++|++++++.+ ++++
T Consensus 2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dls~~~~i~~~~~~i~~~~g~i 80 (241)
T d2a4ka1 2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE-AEAIAVVADVSDPKAVEAVFAEALEEFGRL 80 (241)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCC-SSEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC-CceEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence 3689999999999999999999999999999999999999888877764 57888999999999998743 6789
Q ss_pred cEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhc---cCCCeEEEEcccccc
Q 028043 153 THVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVT 206 (214)
Q Consensus 153 d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~---~~~~~iV~vSS~~~~ 206 (214)
|++|||||...... .+.+++.+.+++|+.+++.+++++. ...+.++++||.+..
T Consensus 81 DiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~ 140 (241)
T d2a4ka1 81 HGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL 140 (241)
T ss_dssp CEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC
T ss_pred cEeccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccccc
Confidence 99999999875322 2233446778999999999999873 234566666665543
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.84 E-value=7.9e-22 Score=164.17 Aligned_cols=130 Identities=15% Similarity=0.123 Sum_probs=100.2
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcC---------hhHHHHHhcccCCCCEEEEEecCCChhccchhh
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD---------PEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~---------~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~ 148 (214)
+.++||+++||||++|||+++|++|+++|++|++.+|+ .+.++++.+++.. ......+|++|.+++++.+
T Consensus 3 m~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~v 81 (302)
T d1gz6a_ 3 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRR-RGGKAVANYDSVEAGEKLV 81 (302)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHH-TTCEEEEECCCGGGHHHHH
T ss_pred cCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhh-cccccccccchHHHHHHHH
Confidence 67899999999999999999999999999999998765 3344444444321 2335678999988876533
Q ss_pred ------hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 149 ------FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 ------~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||+..... ...+++++.+++|+.|++++++++ +++.++||++||.++..+
T Consensus 82 ~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~ 155 (302)
T d1gz6a_ 82 KTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYG 155 (302)
T ss_dssp HHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC
T ss_pred HHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCC
Confidence 679999999999876322 233445678899999999999976 235689999999987643
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.84 E-value=3.1e-21 Score=155.97 Aligned_cols=125 Identities=18% Similarity=0.129 Sum_probs=97.6
Q ss_pred CCEEEEEcCchHHHHHHHHHHH---HCCCeEEEEEcChhHHHHHhcccC-CCCEEEEEecCCChhccchhh--------h
Q 028043 82 SKLVLVAGGSGGVGQLVVASLL---SRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAI--------F 149 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~---~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~v~~Di~d~~~v~~~~--------~ 149 (214)
||+||||||++|||+++|++|+ ++|++|++++|++++++++.+... ..++.++.+|++|++++++++ +
T Consensus 2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~ 81 (248)
T d1snya_ 2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD 81 (248)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence 6899999999999999999996 579999999999987766543222 467999999999999988632 3
Q ss_pred CCCcEEEeccCCCCCCC----CCCCCCCchhHHHHHHHHHHHHHhcc----------------CCCeEEEEcccccc
Q 028043 150 EGVTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSALPS----------------SLKRIVLVSSVGVT 206 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~----~~~~~~~~~~~vNv~g~~~l~~a~~~----------------~~~~iV~vSS~~~~ 206 (214)
+++|+||||||+..... .+.++.++.+++|+.|++.+++++.+ +.+++|++||..+.
T Consensus 82 ~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~ 158 (248)
T d1snya_ 82 QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGS 158 (248)
T ss_dssp GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGC
T ss_pred CCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccc
Confidence 57999999999865322 12223456789999999998886511 24689999998765
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.83 E-value=1.3e-20 Score=147.82 Aligned_cols=117 Identities=24% Similarity=0.308 Sum_probs=98.0
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEecc
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~A 159 (214)
|.+|+|+||||||+||++++++|+++|++|++++|++++++... ..+++++.+|++|.+++.++ +.++|+|||++
T Consensus 1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~----~~~~~~~~gD~~d~~~l~~a-l~~~d~vi~~~ 75 (205)
T d1hdoa_ 1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG----PRPAHVVVGDVLQAADVDKT-VAGQDAVIVLL 75 (205)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS----CCCSEEEESCTTSHHHHHHH-HTTCSEEEECC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccccc----ccccccccccccchhhHHHH-hcCCCEEEEEe
Confidence 45789999999999999999999999999999999988754432 45689999999999999874 78899999999
Q ss_pred CCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccccccccC
Q 028043 160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 160 g~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~~ 209 (214)
|.... ....+++..++.+++++++ .+++|+|++||.+.++..
T Consensus 76 g~~~~--------~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~ 118 (205)
T d1hdoa_ 76 GTRND--------LSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDP 118 (205)
T ss_dssp CCTTC--------CSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCT
T ss_pred ccCCc--------hhhhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCC
Confidence 96431 1123678899999999985 589999999998876543
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=99.83 E-value=6.7e-21 Score=161.28 Aligned_cols=125 Identities=16% Similarity=0.232 Sum_probs=95.3
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChh-----HHHHHhcc--cCCCCEEEEEecCCChhccchhhhC-CCcE
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-----KATTLFGK--QDEETLQVCKGDTRNPKDLDPAIFE-GVTH 154 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~-----~~~~~~~~--~~~~~~~~v~~Di~d~~~v~~~~~~-~~d~ 154 (214)
|+||||||+|+||++++++|+++|++|++++|... +.+.+... ....+++++++|++|.+++++.+-+ ++|+
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDE 81 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCE
Confidence 78999999999999999999999999999999643 22222211 1145789999999999999975322 6799
Q ss_pred EEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc----CCCeEEEEcccccccc
Q 028043 155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS----SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 155 li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~----~~~~iV~vSS~~~~~~ 208 (214)
|+|+||..+.+ ..++++..++++|+.||.+++++++. +..++|++||.++||.
T Consensus 82 v~h~aa~~~~~-~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~ 138 (357)
T d1db3a_ 82 VYNLGAMSHVA-VSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGL 138 (357)
T ss_dssp EEECCCCCTTT-TTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTT
T ss_pred EEEeecccccc-hhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCC
Confidence 99999987643 34466677889999999999999843 3457999999999864
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.83 E-value=5.5e-21 Score=155.46 Aligned_cols=131 Identities=13% Similarity=0.054 Sum_probs=103.1
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHH---CCCeEEEEEcChhHHHHHhcccC----CCCEEEEEecCCChhccchhh--
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLS---RNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAI-- 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~---~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~v~~Di~d~~~v~~~~-- 148 (214)
..++||+++||||++|||+++|++|++ +|++|++++|++++++++.+++. +.++..+++|++|++++++.+
T Consensus 2 ~~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~ 81 (259)
T d1oaaa_ 2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA 81 (259)
T ss_dssp CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHH
Confidence 357899999999999999999999986 79999999999999888766542 446888999999999888642
Q ss_pred --------hCCCcEEEeccCCCCCC------CCCCCCCCchhHHHHHHHHHHHHHhc----c-C--CCeEEEEccccccc
Q 028043 149 --------FEGVTHVICCTGTTAFP------SRRWDGDNTPEKVDWEGVRNLVSALP----S-S--LKRIVLVSSVGVTK 207 (214)
Q Consensus 149 --------~~~~d~li~~Ag~~~~~------~~~~~~~~~~~~vNv~g~~~l~~a~~----~-~--~~~iV~vSS~~~~~ 207 (214)
...+|++|||||..... ..+++++++.+++|+.|++++++++. + + .++||++||.++..
T Consensus 82 ~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~ 161 (259)
T d1oaaa_ 82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ 161 (259)
T ss_dssp HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS
T ss_pred HHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccC
Confidence 13578999999976421 12223446678999999999999772 2 1 25899999998865
Q ss_pred c
Q 028043 208 F 208 (214)
Q Consensus 208 ~ 208 (214)
+
T Consensus 162 ~ 162 (259)
T d1oaaa_ 162 P 162 (259)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=99.83 E-value=1.3e-20 Score=151.26 Aligned_cols=122 Identities=18% Similarity=0.099 Sum_probs=95.5
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChh-ccchhhhCCCcEEEec
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK-DLDPAIFEGVTHVICC 158 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~-~v~~~~~~~~d~li~~ 158 (214)
++||++|||||++|||+++|++|+++|++|++++|+++.+++. +.+++.+|+++.- .+.+ .++++|+||||
T Consensus 2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~-------~~~~~~~Dv~~~~~~~~~-~~g~iD~lVnn 73 (234)
T d1o5ia_ 2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS-------GHRYVVCDLRKDLDLLFE-KVKEVDILVLN 73 (234)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT-------CSEEEECCTTTCHHHHHH-HSCCCSEEEEC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhc-------CCcEEEcchHHHHHHHHH-HhCCCcEEEec
Confidence 5789999999999999999999999999999999999887753 2456789998642 2222 37899999999
Q ss_pred cCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEccccccccC
Q 028043 159 TGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 159 Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~~ 209 (214)
||...... ...+++++.+++|+.+++.+++++ +.+.++||++||..+..+.
T Consensus 74 AG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~ 132 (234)
T d1o5ia_ 74 AGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPI 132 (234)
T ss_dssp CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC
T ss_pred ccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccc
Confidence 99765322 233345667799999999999876 2356799999998876543
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=99.82 E-value=4.2e-21 Score=161.12 Aligned_cols=125 Identities=22% Similarity=0.229 Sum_probs=97.7
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh----hHHHHHhcccCCCCEEEEEecCCChhccchhhh-CCCcEEEe
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP----EKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-EGVTHVIC 157 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~----~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~-~~~d~li~ 157 (214)
|+||||||+|+||++++++|+++|++|++++|-. ...... +.....+++++++|++|.+.+.+.+- .++|+|||
T Consensus 1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViH 79 (338)
T d1udca_ 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVI-ERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIH 79 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHH-HHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHH-HhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEE
Confidence 5799999999999999999999999999998622 112211 11224578999999999999987432 27999999
Q ss_pred ccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccccccccC
Q 028043 158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 158 ~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~~ 209 (214)
+|+....+ ....++...+++|+.|+.+++++++ .+.+++|++||.++|+..
T Consensus 80 lAa~~~~~-~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~ 131 (338)
T d1udca_ 80 FAGLKAVG-ESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQ 131 (338)
T ss_dssp CCSCCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSC
T ss_pred CCCccchh-hHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEccc
Confidence 99976422 1223455778999999999999995 588999999999998654
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.82 E-value=1.1e-20 Score=154.61 Aligned_cols=130 Identities=18% Similarity=0.140 Sum_probs=104.1
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhccc---CCCCEEEEEecCCChhccchhh------h
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ---DEETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
+++||+++||||++|||+++|++|+++|++|++++|++++++++.+++ .+..+..+.+|+.+.+.++... +
T Consensus 11 ~L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 90 (269)
T d1xu9a_ 11 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM 90 (269)
T ss_dssp GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHh
Confidence 478999999999999999999999999999999999999988875543 2456778899999888776522 5
Q ss_pred CCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh----ccCCCeEEEEcccccccc
Q 028043 150 EGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~----~~~~~~iV~vSS~~~~~~ 208 (214)
+.+|+++||||...... .+.++..+.+++|+.|+..+++++ +++.++||++||.++..+
T Consensus 91 g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~~ 156 (269)
T d1xu9a_ 91 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVA 156 (269)
T ss_dssp TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSC
T ss_pred CCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcCC
Confidence 68999999999875322 122234566799999999988876 344589999999987654
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.82 E-value=2.7e-20 Score=152.40 Aligned_cols=129 Identities=16% Similarity=0.171 Sum_probs=101.6
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh-hHHHHHhcccC--CCCEEEEEecCCChhccchhh------
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP-EKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~-~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
.+++||+++||||++|||++++++|+++|++|++++|+. +.++++.+++. +..+.++++|++|++++++.+
T Consensus 14 ~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~ 93 (272)
T d1g0oa_ 14 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKI 93 (272)
T ss_dssp GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHH
Confidence 568999999999999999999999999999999998874 45555544332 456889999999999988743
Q ss_pred hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEcccccc
Q 028043 149 FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVT 206 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~ 206 (214)
++++|++|||||...... ...+++...+++|+.+++++++++.+ ..+++++++|..+.
T Consensus 94 ~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~ 157 (272)
T d1g0oa_ 94 FGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQ 157 (272)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGT
T ss_pred hCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccccc
Confidence 678999999999876332 22334466779999999999998732 34688888887653
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.82 E-value=3.5e-20 Score=149.69 Aligned_cols=124 Identities=15% Similarity=0.128 Sum_probs=101.6
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh--hCCCcEEE
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--FEGVTHVI 156 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~--~~~~d~li 156 (214)
.++||+++||||++|||+++++.|+++|++|++++|++++++++.+ ..+++...+|+.+.+.++... ++++|+||
T Consensus 3 ~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~---~~~~~~~~~d~~~~~~~~~~~~~~~~id~lV 79 (245)
T d2ag5a1 3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK---YPGIQTRVLDVTKKKQIDQFANEVERLDVLF 79 (245)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGG---STTEEEEECCTTCHHHHHHHHHHCSCCSEEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh---ccCCceeeeeccccccccccccccccceeEE
Confidence 3789999999999999999999999999999999999998887765 345788889999887766532 56899999
Q ss_pred eccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEccccc
Q 028043 157 CCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGV 205 (214)
Q Consensus 157 ~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~ 205 (214)
||||...... .+.+++.+.+++|+.+++.+++++ +.+.++||++||.++
T Consensus 80 n~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~ 136 (245)
T d2ag5a1 80 NVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVAS 136 (245)
T ss_dssp ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBT
T ss_pred ecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhh
Confidence 9999876422 233345677899999999999876 235679999999766
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.81 E-value=2e-20 Score=152.25 Aligned_cols=128 Identities=16% Similarity=0.188 Sum_probs=98.4
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEc-ChhHHHHHhcccC--CCCEEEEEecCCChhccchhh------
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR-DPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r-~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
.++.||++|||||++|||++++++|+++|++|++++| +++.++++.+++. +.++..+++|++|++++++.+
T Consensus 2 ~~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~ 81 (259)
T d1ja9a_ 2 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH 81 (259)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHH
Confidence 4578999999999999999999999999999998765 4555566555443 457889999999999988743
Q ss_pred hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEccccc
Q 028043 149 FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGV 205 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~ 205 (214)
++++|++|||||...... ...+.+++.+++|+.+++++++++.+ ..+++++++|..+
T Consensus 82 ~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~ 144 (259)
T d1ja9a_ 82 FGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAA 144 (259)
T ss_dssp HSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred cCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccc
Confidence 678999999999875322 22234467789999999999997722 2346777776654
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.81 E-value=1.4e-20 Score=152.66 Aligned_cols=131 Identities=15% Similarity=0.095 Sum_probs=99.7
Q ss_pred CCCCCCEEEEEcCch--HHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC-CCCEEEEEecCCChhccchhh------
Q 028043 78 PASSSKLVLVAGGSG--GVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 78 ~~~~~k~vlITGasg--gIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
.+++||+++||||+| |||+++|++|+++|++|++.+|+++..++..+... ......+++|++|++++++.+
T Consensus 4 ~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 83 (256)
T d1ulua_ 4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEA 83 (256)
T ss_dssp ECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHh
Confidence 357899999999987 99999999999999999999998765444322211 345678999999999988743
Q ss_pred hCCCcEEEeccCCCCCC-------CCCCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEcccccccc
Q 028043 149 FEGVTHVICCTGTTAFP-------SRRWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~-------~~~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~~ 208 (214)
++++|+||||||..... ....+++...+++|+.+++.+++++.+ ..++||++||.++..+
T Consensus 84 ~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~ 153 (256)
T d1ulua_ 84 FGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKV 153 (256)
T ss_dssp HSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSB
T ss_pred cCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCC
Confidence 67899999999986421 111122345678999999999998743 2368999999988654
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=99.81 E-value=1.3e-19 Score=149.48 Aligned_cols=130 Identities=12% Similarity=0.133 Sum_probs=99.7
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC---CCCEEEEEecCCChhccchhh------
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
.+++||+++||||+||||+++|++|+++|++|++++|+.+++++..+++. +..+..+.+|++|++++++.+
T Consensus 21 ~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~ 100 (294)
T d1w6ua_ 21 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV 100 (294)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhh
Confidence 57899999999999999999999999999999999999988776554432 456888999999999987633
Q ss_pred hCCCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh------ccCCCeEEEEccccccc
Q 028043 149 FEGVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL------PSSLKRIVLVSSVGVTK 207 (214)
Q Consensus 149 ~~~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~------~~~~~~iV~vSS~~~~~ 207 (214)
++++|+||||||...... ...++....+.+|+.+...+...+ ....+.++.++|.++..
T Consensus 101 ~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~ 168 (294)
T d1w6ua_ 101 AGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAET 168 (294)
T ss_dssp TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHH
T ss_pred ccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhh
Confidence 578999999999876322 112233455677888877776643 22445678888876544
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.80 E-value=5.4e-20 Score=148.75 Aligned_cols=125 Identities=23% Similarity=0.176 Sum_probs=97.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC--eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hC--
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FE-- 150 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~-- 150 (214)
..|+||||||++|||+++|++|+++|+ +|++.+|+.++++++.+.. +.++.++.+|++|++++++++ ++
T Consensus 2 ~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~-~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~ 80 (250)
T d1yo6a1 2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIK-DSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD 80 (250)
T ss_dssp CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCC-CTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred cCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhh-CCceEEEEEecCCHHHHHHHHHHHHHHhCCC
Confidence 458999999999999999999999996 6888999999888876544 467899999999999988643 33
Q ss_pred CCcEEEeccCCCCCCC----CCCCCCCchhHHHHHHHHHHHHHhcc----------------CCCeEEEEcccccc
Q 028043 151 GVTHVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSALPS----------------SLKRIVLVSSVGVT 206 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~----~~~~~~~~~~~vNv~g~~~l~~a~~~----------------~~~~iV~vSS~~~~ 206 (214)
++|+||||||+..... .+.++.++.+++|+.|++++++++.+ ..++++++|+....
T Consensus 81 ~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~ 156 (250)
T d1yo6a1 81 GLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGS 156 (250)
T ss_dssp CCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGC
T ss_pred CeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceecccccccccccc
Confidence 4999999999865211 11223456789999999999887611 12578888887554
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.79 E-value=7.5e-20 Score=150.87 Aligned_cols=126 Identities=22% Similarity=0.225 Sum_probs=95.9
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEE---EEcChhH---HHHHhcccC--CCCEEEEEecCCChhccchhh----hC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRL---LLRDPEK---ATTLFGKQD--EETLQVCKGDTRNPKDLDPAI----FE 150 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~---~~r~~~~---~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~----~~ 150 (214)
|+||||||++|||+++|++|+++|++|+. ..|+.+. +++..+++. +.++..+.+|++|++++++++ .+
T Consensus 3 kVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g 82 (285)
T d1jtva_ 3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEG 82 (285)
T ss_dssp EEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTS
T ss_pred CEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhcccc
Confidence 67899999999999999999999987554 4555443 333333332 457899999999999988743 35
Q ss_pred CCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEcccccccc
Q 028043 151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~ 208 (214)
.+|+||||||...... ...+++++.+++|+.|+.++++++ +++.++||++||.++..+
T Consensus 83 ~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~ 148 (285)
T d1jtva_ 83 RVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMG 148 (285)
T ss_dssp CCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSC
T ss_pred chhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCC
Confidence 7999999999876432 223345667899999999999876 245689999999988654
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.78 E-value=6.9e-20 Score=154.03 Aligned_cols=124 Identities=19% Similarity=0.185 Sum_probs=96.5
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh----hHHHHHhcccCCCCEEEEEecCCChhccchhhh-CCCcEEEe
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP----EKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-EGVTHVIC 157 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~----~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~-~~~d~li~ 157 (214)
|+||||||+|+||++++++|+++|++|+++++.. ...... ......+++++++|++|.+.++.+.. .++|+|||
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~-~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vih 80 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARL-EVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIH 80 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHH-HHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhH-HhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEE
Confidence 7899999999999999999999999999997632 111111 11114578899999999999987432 27999999
Q ss_pred ccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEcccccccc
Q 028043 158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 158 ~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~ 208 (214)
+|+..... ...+++.....+|+.|+.+++++++ .+.+++|++||..+|+.
T Consensus 81 lAa~~~~~-~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~ 131 (347)
T d1z45a2 81 FAGLKAVG-ESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGD 131 (347)
T ss_dssp CCSCCCHH-HHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCC
T ss_pred cccccccc-ccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecC
Confidence 99976522 2223445667899999999999985 57899999999999974
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.78 E-value=1.4e-20 Score=152.66 Aligned_cols=122 Identities=9% Similarity=-0.090 Sum_probs=94.9
Q ss_pred EEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCCcEEEe
Q 028043 84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGVTHVIC 157 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~d~li~ 157 (214)
+++||||++|||+++|++|+++|++|++.+|+.+.++++..... .+..+|++|++++++.+ ++++|+|||
T Consensus 2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~----~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVn 77 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAE----TYPQLKPMSEQEPAELIEAVTSAYGQVDVLVS 77 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHH----HCTTSEECCCCSHHHHHHHHHHHHSCCCEEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhC----cEEEeccCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 79999999999999999999999999999999887776643221 23458899888877633 679999999
Q ss_pred ccCCCCC-CC---CCCCCCCchhHHHHHHHHHHHHHh-----ccCCCeEEEEccccccccC
Q 028043 158 CTGTTAF-PS---RRWDGDNTPEKVDWEGVRNLVSAL-----PSSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 158 ~Ag~~~~-~~---~~~~~~~~~~~vNv~g~~~l~~a~-----~~~~~~iV~vSS~~~~~~~ 209 (214)
|||.... .. ...+++++.+++|+.+++++++++ +++.++||++||.++..+.
T Consensus 78 NAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~ 138 (252)
T d1zmta1 78 NDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPW 138 (252)
T ss_dssp ECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCC
T ss_pred CCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeeccccccccccc
Confidence 9997542 11 222345667799999999999876 2356899999999886543
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.77 E-value=1.6e-19 Score=149.91 Aligned_cols=123 Identities=20% Similarity=0.205 Sum_probs=90.6
Q ss_pred EEEEEcCchHHHHHHHHHHHHCCCeEEEEEcC--hhHHHHHhcccCCCCEEEEEecCCChhccchhhhC-CCcEEEeccC
Q 028043 84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD--PEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-GVTHVICCTG 160 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~-~~d~li~~Ag 160 (214)
+||||||+|+||++++++|+++|++|+++++- ....+.+.......+++++.+|++|.+.+.+++-+ ++|+|||+|+
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~aa 81 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAG 81 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEeecc
Confidence 69999999999999999999999999998742 22222222112245789999999999999875322 5899999999
Q ss_pred CCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccccccc
Q 028043 161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 161 ~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~ 207 (214)
..... ....++...+++|+.||.++++++. .+..++|+.||.++++
T Consensus 82 ~~~~~-~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~ 128 (338)
T d1orra_ 82 QVAMT-TSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVY 128 (338)
T ss_dssp CCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGG
T ss_pred ccccc-ccccChHHHHHHHHHHHHHHHHhhhccccccccccccccccc
Confidence 87532 1123445677999999999999884 4666666666655543
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.77 E-value=2.2e-18 Score=144.62 Aligned_cols=123 Identities=25% Similarity=0.258 Sum_probs=97.7
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcc---cC-CCCEEEEEecCCChhccchhhhCCCcEE
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGK---QD-EETLQVCKGDTRNPKDLDPAIFEGVTHV 155 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~---~~-~~~~~~v~~Di~d~~~v~~~~~~~~d~l 155 (214)
..||+||||||+|+||++++++|+++|++|+++.|+.++...+.+. .. ......+.+|++|.+++.+ ++.++|++
T Consensus 9 ~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~-~~~~~~~v 87 (342)
T d1y1pa1 9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDE-VIKGAAGV 87 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTT-TTTTCSEE
T ss_pred CCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhh-hcccchhh
Confidence 3589999999999999999999999999999999998776554321 11 2234457799999999987 46889999
Q ss_pred EeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc--CCCeEEEEccccccc
Q 028043 156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS--SLKRIVLVSSVGVTK 207 (214)
Q Consensus 156 i~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~--~~~~iV~vSS~~~~~ 207 (214)
+|+|+..... ......+..|+.|+.++++++.+ +++++|++||.++.+
T Consensus 88 ~~~a~~~~~~----~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~ 137 (342)
T d1y1pa1 88 AHIASVVSFS----NKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSAL 137 (342)
T ss_dssp EECCCCCSCC----SCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTC
T ss_pred hhhccccccc----ccccccccchhhhHHHHHHhhhcccccccccccccceeec
Confidence 9999976421 23445678899999999998843 689999999986543
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.76 E-value=4e-19 Score=149.04 Aligned_cols=127 Identities=20% Similarity=0.217 Sum_probs=98.9
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcC----------hhHHHHHhcccCCCCEEEEEecCCChhccchhhh-C
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD----------PEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-E 150 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~----------~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~-~ 150 (214)
.|+||||||+|+||++|+++|+++|++|++++|. .+..+.. +.....++.++++|++|.+.+++... .
T Consensus 2 ~kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~l~~~~~~~ 80 (346)
T d1ek6a_ 2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRV-QELTGRSVEFEEMDILDQGALQRLFKKY 80 (346)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHH-HHHHTCCCEEEECCTTCHHHHHHHHHHC
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHH-HHhcCCCcEEEEeecccccccccccccc
Confidence 3799999999999999999999999999999752 1122221 12225678999999999999987543 3
Q ss_pred CCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccccccccCC
Q 028043 151 GVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNE 210 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~~~ 210 (214)
.+++++|+||..+.. ....++.+.+++|+.|+.+++++++ .+++++|++||..+++...
T Consensus 81 ~~~~i~h~Aa~~~~~-~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~ 140 (346)
T d1ek6a_ 81 SFMAVIHFAGLKAVG-ESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQ 140 (346)
T ss_dssp CEEEEEECCSCCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCS
T ss_pred ccccccccccccCcH-hhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeeccc
Confidence 688999999987532 1223455678999999999999984 5889999999999988654
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=99.76 E-value=3.7e-19 Score=148.90 Aligned_cols=123 Identities=15% Similarity=0.106 Sum_probs=97.6
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccCC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGT 161 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag~ 161 (214)
|+||||||+|+||++++++|+++|+ +|+++++.......+. ...+++++.+|+++.+++.+....++|+|||+|+.
T Consensus 1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~---~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~~ 77 (342)
T d2blla1 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL---NHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAI 77 (342)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT---TCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc---cCCCeEEEECccCChHHHHHHHHhCCCcccccccc
Confidence 5799999999999999999999994 8999988765544433 25679999999998877665456689999999998
Q ss_pred CCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEEccccccccC
Q 028043 162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 162 ~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~vSS~~~~~~~ 209 (214)
.... ....++...+.+|+.|+.++++++.....+++++||..+|+..
T Consensus 78 ~~~~-~~~~~~~~~~~~nv~gt~~ll~~~~~~~~~~~~~ss~~~~~~~ 124 (342)
T d2blla1 78 ATPI-EYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMC 124 (342)
T ss_dssp CCHH-HHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTC
T ss_pred cccc-ccccCCccccccccccccccccccccccccccccccccccccc
Confidence 7532 2223445678999999999999997666677889998888753
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.76 E-value=7.8e-19 Score=148.12 Aligned_cols=125 Identities=14% Similarity=0.005 Sum_probs=98.2
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
+-++|+||||||+|+||++|+++|+++|++|++++|....... .. .....+..+|+.|.+.+.+ .+.++|.|||+
T Consensus 12 ~~~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~--~~--~~~~~~~~~D~~~~~~~~~-~~~~~d~Vih~ 86 (363)
T d2c5aa1 12 PSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMT--ED--MFCDEFHLVDLRVMENCLK-VTEGVDHVFNL 86 (363)
T ss_dssp TTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC--GG--GTCSEEEECCTTSHHHHHH-HHTTCSEEEEC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchh--hh--cccCcEEEeechhHHHHHH-HhhcCCeEeec
Confidence 3467889999999999999999999999999999875432111 01 1345678899999988886 46889999999
Q ss_pred cCCCCCCCCCCCCCCchhHHHHHHHHHHHHHh-ccCCCeEEEEcccccccc
Q 028043 159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-PSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 159 Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~-~~~~~~iV~vSS~~~~~~ 208 (214)
|+.................+|+.|+.++++++ +.+.+++|++||..+++.
T Consensus 87 a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~ 137 (363)
T d2c5aa1 87 AADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPE 137 (363)
T ss_dssp CCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCG
T ss_pred ccccccccccccccccccccccchhhHHHHhHHhhCccccccccccccccc
Confidence 98765322223445566789999999999988 468899999999999874
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.75 E-value=1e-18 Score=148.95 Aligned_cols=127 Identities=14% Similarity=0.137 Sum_probs=92.3
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhH--------------------HHHHhcccCCCCEEEEEecCCCh
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK--------------------ATTLFGKQDEETLQVCKGDTRNP 141 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~--------------------~~~~~~~~~~~~~~~v~~Di~d~ 141 (214)
||+||||||+|+||++++++|+++|++|+++|.-..+ ... .....+.+++++++|++|.
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~Dl~d~ 79 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISR-WKALTGKSIELYVGDICDF 79 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHH-HHHHHCCCCEEEESCTTSH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHH-HHhhcCCCcEEEEccCCCH
Confidence 6899999999999999999999999999999731110 111 1111145789999999999
Q ss_pred hccchhhhC-CCcEEEeccCCCCCCCCC--CCCCCchhHHHHHHHHHHHHHhcc-CC-CeEEEEccccccccC
Q 028043 142 KDLDPAIFE-GVTHVICCTGTTAFPSRR--WDGDNTPEKVDWEGVRNLVSALPS-SL-KRIVLVSSVGVTKFN 209 (214)
Q Consensus 142 ~~v~~~~~~-~~d~li~~Ag~~~~~~~~--~~~~~~~~~vNv~g~~~l~~a~~~-~~-~~iV~vSS~~~~~~~ 209 (214)
+.+++++-+ ++|+|||+||....+... .......+.+|+.|+.+++++++. +. .++++.||..+++..
T Consensus 80 ~~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~ 152 (393)
T d1i24a_ 80 EFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTP 152 (393)
T ss_dssp HHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCC
T ss_pred HHHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeecccccccccc
Confidence 999975322 689999999986532211 112234578999999999999854 44 568888888777643
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.74 E-value=1.2e-18 Score=141.19 Aligned_cols=127 Identities=22% Similarity=0.217 Sum_probs=96.8
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhH---HHHHhcccC--CCCEEEEEecCCChhccchhh-----hC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEK---ATTLFGKQD--EETLQVCKGDTRNPKDLDPAI-----FE 150 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~---~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~-----~~ 150 (214)
++++|||||+||||++++++|+++|+ +|++++|+... .+++.+++. +.++.++.+|++|++++++.. ..
T Consensus 9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~~ 88 (259)
T d2fr1a1 9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDDV 88 (259)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTS
T ss_pred cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhccccccc
Confidence 47999999999999999999999999 58888987432 333333222 457889999999999988643 23
Q ss_pred CCcEEEeccCCCCCCC---CCCCCCCchhHHHHHHHHHHHHHhcc-CCCeEEEEcccccccc
Q 028043 151 GVTHVICCTGTTAFPS---RRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~---~~~~~~~~~~~vNv~g~~~l~~a~~~-~~~~iV~vSS~~~~~~ 208 (214)
++|.||||||...... ...++....+++|+.|+.++.++++. ..++||++||.++..+
T Consensus 89 ~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g 150 (259)
T d2fr1a1 89 PLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFG 150 (259)
T ss_dssp CEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTC
T ss_pred cccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhccC
Confidence 6999999999876432 12223355668899999999998854 5679999999987643
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.74 E-value=4.5e-19 Score=150.24 Aligned_cols=125 Identities=14% Similarity=0.134 Sum_probs=94.1
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEE-EcChh--HHHHHhcccCCCCEEEEEecCCChhccchhhhC-CCcEEEec
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLL-LRDPE--KATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-GVTHVICC 158 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~-~r~~~--~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~-~~d~li~~ 158 (214)
|+||||||+|+||++|+++|+++|++|++. ++... ..+.+.......+++++++|++|.+.++..+-+ .+|+|||+
T Consensus 1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vihl 80 (361)
T d1kewa_ 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL 80 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEEEC
Confidence 579999999999999999999999986554 43221 122222223356899999999999999874322 69999999
Q ss_pred cCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc----------CCCeEEEEcccccccc
Q 028043 159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS----------SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 159 Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~----------~~~~iV~vSS~~~~~~ 208 (214)
|+....+ ..+.++...+++|+.|+.+++++++. +.+++|++||.++|+.
T Consensus 81 Aa~~~~~-~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~ 139 (361)
T d1kewa_ 81 AAESHVD-RSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGD 139 (361)
T ss_dssp CSCCCHH-HHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCC
T ss_pred ccccchh-hHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCC
Confidence 9976522 22345567889999999999998732 3458999999999974
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.74 E-value=3.3e-18 Score=137.77 Aligned_cols=129 Identities=17% Similarity=0.238 Sum_probs=101.5
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------hCCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------FEGV 152 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~~~~ 152 (214)
+++||+++||||++|||+++|++|+++|++|++++|+.++++++.+++. .......+|+.+.+.++... +...
T Consensus 2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (248)
T d2o23a1 2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLG-NNCVFAPADVTSEKDVQTALALAKGKFGRV 80 (248)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHC-TTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC-CCcccccccccccccccccccccccccccc
Confidence 5789999999999999999999999999999999999998888776663 56778899999988776522 4578
Q ss_pred cEEEeccCCCCCCC---------CCCCCCCchhHHHHHHHHHHHHHhcc-----------CCCeEEEEcccccccc
Q 028043 153 THVICCTGTTAFPS---------RRWDGDNTPEKVDWEGVRNLVSALPS-----------SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 153 d~li~~Ag~~~~~~---------~~~~~~~~~~~vNv~g~~~l~~a~~~-----------~~~~iV~vSS~~~~~~ 208 (214)
|.+++|++...... ...+.+.+.+++|+.|++++++++.+ +.++||++||.++..+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~ 156 (248)
T d2o23a1 81 DVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEG 156 (248)
T ss_dssp CEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC
T ss_pred cccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccC
Confidence 99999988754211 11123456779999999999987611 2347999999988654
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=99.74 E-value=1.1e-18 Score=146.44 Aligned_cols=126 Identities=17% Similarity=0.149 Sum_probs=95.1
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC-CCCEEEEEecCCChhccchhhh-CCCcEEEec
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAIF-EGVTHVICC 158 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~v~~Di~d~~~v~~~~~-~~~d~li~~ 158 (214)
++|+||||||+|+||++++++|+++|++|++++|+......+.+... ..+++++.+|++|++.+.++.. ..+|+++|+
T Consensus 7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~~ 86 (356)
T d1rkxa_ 7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHM 86 (356)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhchhhhhhhh
Confidence 67999999999999999999999999999999998754433322221 3468999999999999887432 368999999
Q ss_pred cCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-C-CCeEEEEccccccc
Q 028043 159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S-LKRIVLVSSVGVTK 207 (214)
Q Consensus 159 Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~-~~~iV~vSS~~~~~ 207 (214)
|+.... ...++.+...+.+|+.|+.+++++++. + ...+++.||...++
T Consensus 87 aa~~~~-~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~ 136 (356)
T d1rkxa_ 87 AAQPLV-RLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYD 136 (356)
T ss_dssp CSCCCH-HHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBC
T ss_pred hccccc-cccccCCccccccccccchhhhhhhhcccccccccccccccccc
Confidence 997652 222345566789999999999999843 4 44555555554443
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.73 E-value=2.9e-18 Score=142.32 Aligned_cols=119 Identities=17% Similarity=0.198 Sum_probs=87.2
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChh-HHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccCC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-KATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGT 161 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag~ 161 (214)
|+||||||+|+||++++++|+++|++|++++|... +.+.+........+.....|+ ++. ++.++|+|||+|+.
T Consensus 2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~-----~~~-~~~~~d~VihlAa~ 75 (312)
T d2b69a1 2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDV-----VEP-LYIEVDQIYHLASP 75 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCT-----TSC-CCCCCSEEEECCSC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcCCCceEEEehHH-----HHH-HHcCCCEEEECccc
Confidence 78999999999999999999999999999987332 222222222233444444444 443 34579999999997
Q ss_pred CCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEEcccccccc
Q 028043 162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 162 ~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~vSS~~~~~~ 208 (214)
...+ ....++.+.+++|+.|+.+++++++....++|++||.++|+.
T Consensus 76 ~~~~-~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~k~I~~SS~~vy~~ 121 (312)
T d2b69a1 76 ASPP-NYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGD 121 (312)
T ss_dssp CSHH-HHTTCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEGGGGBS
T ss_pred CCch-hHHhCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEEChheecC
Confidence 6532 122455667899999999999999654458999999999874
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.73 E-value=1.4e-18 Score=145.38 Aligned_cols=125 Identities=18% Similarity=0.189 Sum_probs=92.9
Q ss_pred CEE-EEEcCchHHHHHHHHHHHHCCCeEEEEEcChhH-----HHHHhccc---CCCCEEEEEecCCChhccchhhh-CCC
Q 028043 83 KLV-LVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-----ATTLFGKQ---DEETLQVCKGDTRNPKDLDPAIF-EGV 152 (214)
Q Consensus 83 k~v-lITGasggIG~~la~~L~~~G~~V~~~~r~~~~-----~~~~~~~~---~~~~~~~v~~Di~d~~~v~~~~~-~~~ 152 (214)
|+| |||||+|+||++++++|+++|++|++++|.... .+.+.... ...+++++.+|++|.+.+.++.. .++
T Consensus 1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 80 (347)
T d1t2aa_ 1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP 80 (347)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhccc
Confidence 456 999999999999999999999999999996532 22221111 13468899999999999987532 268
Q ss_pred cEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-C---CCeEEEEcccccccc
Q 028043 153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-S---LKRIVLVSSVGVTKF 208 (214)
Q Consensus 153 d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~---~~~iV~vSS~~~~~~ 208 (214)
++++|+|+..... ..+......+++|+.||.++++++++ + ..++|++||.++||.
T Consensus 81 ~~v~~~~a~~~~~-~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~ 139 (347)
T d1t2aa_ 81 TEIYNLGAQSHVK-ISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGK 139 (347)
T ss_dssp SEEEECCSCCCHH-HHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCS
T ss_pred ceeeeeeeccccc-hhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecC
Confidence 8999999876521 11234445679999999999998843 3 358999999999874
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.72 E-value=1.2e-18 Score=139.12 Aligned_cols=125 Identities=23% Similarity=0.293 Sum_probs=98.2
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC--eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
+++|+|+||||||+||++++++|+++|. +|++++|++....... ...+....+|+.+.+++.+ .+.++|++||
T Consensus 12 m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~----~~~i~~~~~D~~~~~~~~~-~~~~~d~vi~ 86 (232)
T d2bkaa1 12 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA----YKNVNQEVVDFEKLDDYAS-AFQGHDVGFC 86 (232)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG----GGGCEEEECCGGGGGGGGG-GGSSCSEEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccc----cceeeeeeecccccccccc-cccccccccc
Confidence 3568999999999999999999999995 8999999875432211 2356778899999998886 4788999999
Q ss_pred ccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHh-ccCCCeEEEEccccccccCCCCC
Q 028043 158 CTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-PSSLKRIVLVSSVGVTKFNELPW 213 (214)
Q Consensus 158 ~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~-~~~~~~iV~vSS~~~~~~~~~p~ 213 (214)
++|..... .....+.++|+.++.++++++ +.+.+++|++||..++.....+|
T Consensus 87 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~~~~~~Y 139 (232)
T d2bkaa1 87 CLGTTRGK----AGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSSNFLY 139 (232)
T ss_dssp CCCCCHHH----HHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCSSHH
T ss_pred cccccccc----cchhhhhhhcccccceeeecccccCccccccCCccccccCccchh
Confidence 99965311 123446789999999999988 45889999999999876655443
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.71 E-value=8.7e-18 Score=140.58 Aligned_cols=126 Identities=18% Similarity=0.222 Sum_probs=97.8
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcC----hhHHHHHhc---ccCCCCEEEEEecCCChhccchhhhCCCcE
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD----PEKATTLFG---KQDEETLQVCKGDTRNPKDLDPAIFEGVTH 154 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~----~~~~~~~~~---~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~ 154 (214)
.|+||||||+|+||++++++|.++|++|++++|. ....+.... .....+++++.+|+.|...... .....+.
T Consensus 16 ~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~-~~~~~~~ 94 (341)
T d1sb8a_ 16 PKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNN-ACAGVDY 94 (341)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHH-HHTTCSE
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccc-ccccccc
Confidence 4799999999999999999999999999999873 222222211 1113568999999999988775 4678999
Q ss_pred EEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccccccccC
Q 028043 155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 155 li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~~ 209 (214)
++|.++....+. ..+++...+++|+.|+.+++++|. .+.+++|++||.++|+..
T Consensus 95 v~~~~a~~~~~~-~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~ 149 (341)
T d1sb8a_ 95 VLHQAALGSVPR-SINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDH 149 (341)
T ss_dssp EEECCSCCCHHH-HHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTC
T ss_pred cccccccccccc-cccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCC
Confidence 999998765321 123445678999999999999984 577899999999999854
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.70 E-value=3.1e-18 Score=143.75 Aligned_cols=125 Identities=14% Similarity=0.147 Sum_probs=96.1
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh---hHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP---EKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~---~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
+|+||||||||+||++++++|+++|++|.+++++. .............+++++.+|++|.+.+.. ++.+.|.++|+
T Consensus 2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~-~~~~~~~v~~~ 80 (346)
T d1oc2a_ 2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDK-LAAKADAIVHY 80 (346)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHH-HHTTCSEEEEC
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHH-HHhhhhhhhhh
Confidence 68999999999999999999999999866655431 111111122235689999999999999987 47789999999
Q ss_pred cCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEEcccccccc
Q 028043 159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 159 Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~vSS~~~~~~ 208 (214)
|+...... ...++.+.+++|+.|+.++++++.....++|++||..+|+.
T Consensus 81 a~~~~~~~-~~~~~~~~~~~N~~g~~nll~~~~~~~~k~i~~ss~~vyg~ 129 (346)
T d1oc2a_ 81 AAESHNDN-SLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYGD 129 (346)
T ss_dssp CSCCCHHH-HHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGGCC
T ss_pred hhcccccc-hhhCcccceeeehHhHHhhhhhhccccccccccccceEecc
Confidence 99875321 12345677899999999999998665578999999998863
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.69 E-value=1.6e-17 Score=132.83 Aligned_cols=120 Identities=13% Similarity=0.082 Sum_probs=85.6
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh--------hCCCc
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI--------FEGVT 153 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~--------~~~~d 153 (214)
.++|+||||++|||++++++|+++|++|++++|+++... .....+.+|+.+.+...... ++++|
T Consensus 2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD 73 (235)
T d1ooea_ 2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA--------DSNILVDGNKNWTEQEQSILEQTASSLQGSQVD 73 (235)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS--------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc--------cccceeccccCchhHHHHHHHHHHHHhcCCCee
Confidence 357899999999999999999999999999999875321 12234456666555433211 46799
Q ss_pred EEEeccCCCCCCC-CCC---CCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEccccccccC
Q 028043 154 HVICCTGTTAFPS-RRW---DGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 154 ~li~~Ag~~~~~~-~~~---~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~~~ 209 (214)
+||||||...... ..+ +..+..+++|+.+++++++++.+ ..++||++||.++..+.
T Consensus 74 ~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~ 136 (235)
T d1ooea_ 74 GVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPT 136 (235)
T ss_dssp EEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC
T ss_pred EEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCc
Confidence 9999999754221 111 22345679999999999887722 23689999999876644
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.68 E-value=2.3e-17 Score=136.37 Aligned_cols=125 Identities=21% Similarity=0.222 Sum_probs=93.7
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhH--HHHHhcccCCCCEEEEEecCCChhccchhhhC-CCcEEEecc
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK--ATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-GVTHVICCT 159 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~-~~d~li~~A 159 (214)
|+||||||+|+||++++++|+++||+|++++|.... .+.+.......+++++.+|++|.+.+.+.... ..++++|+|
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~a 80 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNLA 80 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhcccccccccccc
Confidence 689999999999999999999999999999986532 11111111245789999999999988874333 678899998
Q ss_pred CCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CC-CeEEEEcccccccc
Q 028043 160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL-KRIVLVSSVGVTKF 208 (214)
Q Consensus 160 g~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~-~~iV~vSS~~~~~~ 208 (214)
+..... ....+....+.+|+.|+.++++++++ +. +++++.||...++.
T Consensus 81 ~~~~~~-~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~ 130 (321)
T d1rpna_ 81 AQSFVG-ASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGL 130 (321)
T ss_dssp SCCCHH-HHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCS
T ss_pred cccccc-ccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCc
Confidence 876522 22345566789999999999998853 44 57788888777654
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.68 E-value=4.2e-17 Score=130.51 Aligned_cols=121 Identities=15% Similarity=0.096 Sum_probs=86.4
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh------h--CCC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI------F--EGV 152 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~------~--~~~ 152 (214)
+||+|+||||+||||++++++|+++|++|+++++++.... .....+.+|..+.++.+... + +++
T Consensus 1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 72 (236)
T d1dhra_ 1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA--------SASVIVKMTDSFTEQADQVTAEVGKLLGDQKV 72 (236)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS--------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc--------cccceeecccCcHHHHHHHHHHHHHHhCCCCc
Confidence 4799999999999999999999999999999998764321 12234456666555444311 2 369
Q ss_pred cEEEeccCCCCCCC----CCCCCCCchhHHHHHHHHHHHHHhc---cCCCeEEEEccccccccC
Q 028043 153 THVICCTGTTAFPS----RRWDGDNTPEKVDWEGVRNLVSALP---SSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 153 d~li~~Ag~~~~~~----~~~~~~~~~~~vNv~g~~~l~~a~~---~~~~~iV~vSS~~~~~~~ 209 (214)
|+||||||...... ...+..+..+++|+.++.++++++. ...++||++||.++..+.
T Consensus 73 D~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~ 136 (236)
T d1dhra_ 73 DAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGT 136 (236)
T ss_dssp EEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC
T ss_pred eEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCc
Confidence 99999999643211 1122345667999999999988762 234789999999886543
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=99.67 E-value=1.3e-17 Score=137.72 Aligned_cols=109 Identities=14% Similarity=0.078 Sum_probs=86.1
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhh-CCCcEEEeccCC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-EGVTHVICCTGT 161 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~-~~~d~li~~Ag~ 161 (214)
|+||||||+|+||++|+++|+++|+.|+++++..+ +|+.|.+.+.+.+- ..+|.++|+|+.
T Consensus 3 kkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~~------------------~~~~~~~~~~~~~~~~~~d~v~~~a~~ 64 (315)
T d1e6ua_ 3 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE------------------LNLLDSRAVHDFFASERIDQVYLAAAK 64 (315)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTT------------------CCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCchh------------------ccccCHHHHHHHHhhcCCCEEEEcchh
Confidence 68999999999999999999999999887764321 58889888876432 369999999987
Q ss_pred CCCCCCCCCCCCchhHHHHHHHHHHHHHh-ccCCCeEEEEccccccccC
Q 028043 162 TAFPSRRWDGDNTPEKVDWEGVRNLVSAL-PSSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 162 ~~~~~~~~~~~~~~~~vNv~g~~~l~~a~-~~~~~~iV~vSS~~~~~~~ 209 (214)
.........+..+.+++|+.||.++++++ +.+.+++|++||.++|+..
T Consensus 65 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~ 113 (315)
T d1e6ua_ 65 VGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKL 113 (315)
T ss_dssp CCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTT
T ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCC
Confidence 54211122234456789999999999988 4588999999999999753
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=99.67 E-value=5.7e-18 Score=131.58 Aligned_cols=85 Identities=19% Similarity=0.181 Sum_probs=73.4
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC-CCCEEEEEecCCChhccchhhhCCCcEEE
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAIFEGVTHVI 156 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~v~~Di~d~~~v~~~~~~~~d~li 156 (214)
.+++||+++||||+||||++++++|+++|++|++++|+.++++++.+.+. ...+....+|++|.+++++ .++++|+||
T Consensus 19 ~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~iDili 97 (191)
T d1luaa1 19 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAE-AVKGAHFVF 97 (191)
T ss_dssp SCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHH-HTTTCSEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHH-HhcCcCeee
Confidence 56789999999999999999999999999999999999999887765543 2345568899999999987 479999999
Q ss_pred eccCCCC
Q 028043 157 CCTGTTA 163 (214)
Q Consensus 157 ~~Ag~~~ 163 (214)
||||...
T Consensus 98 n~Ag~g~ 104 (191)
T d1luaa1 98 TAGAIGL 104 (191)
T ss_dssp ECCCTTC
T ss_pred ecCcccc
Confidence 9999753
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.67 E-value=1.2e-17 Score=138.70 Aligned_cols=125 Identities=21% Similarity=0.264 Sum_probs=93.8
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeE------EEEEcCh--hHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcE
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKS------RLLLRDP--EKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTH 154 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V------~~~~r~~--~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~ 154 (214)
|+||||||+|+||++++++|+++|++| +.+++.. .....+.......+++++.+|..+...... ....+|.
T Consensus 1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~~d~ 79 (322)
T d1r6da_ 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLAR-ELRGVDA 79 (322)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHH-HTTTCCE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhc-cccccce
Confidence 579999999999999999999999854 4444321 111112222225679999999999988775 4678999
Q ss_pred EEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccccccccC
Q 028043 155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 155 li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~~ 209 (214)
|+|+|+...... ...+....+++|+.|+.++++++. .+.+++|++||.++|+..
T Consensus 80 vi~~a~~~~~~~-~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~ 134 (322)
T d1r6da_ 80 IVHFAAESHVDR-SIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSI 134 (322)
T ss_dssp EEECCSCCCHHH-HHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCC
T ss_pred EEeecccccccc-cccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCC
Confidence 999998765321 223445667899999999999984 578899999999998754
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.66 E-value=4.1e-17 Score=138.54 Aligned_cols=126 Identities=21% Similarity=0.190 Sum_probs=93.3
Q ss_pred CCEEEEEcCchHHHHHHHHHHHH-CCCeEEEEEcC------------hhHHHH-Hhc------ccCCCCEEEEEecCCCh
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLS-RNIKSRLLLRD------------PEKATT-LFG------KQDEETLQVCKGDTRNP 141 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~-~G~~V~~~~r~------------~~~~~~-~~~------~~~~~~~~~v~~Di~d~ 141 (214)
+|+||||||+|+||++++++|++ .|++|+++|+- .+.... +.. ......+.++.+|++|.
T Consensus 2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~ 81 (383)
T d1gy8a_ 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE 81 (383)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence 46899999999999999999986 79999999741 111111 110 11134578899999999
Q ss_pred hccchhh--hCCCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEcccccccc
Q 028043 142 KDLDPAI--FEGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 142 ~~v~~~~--~~~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~ 208 (214)
+.+++++ ..++|+|||+|+....+. ........+++|+.|+.+++++++ .+.+++++.||...++.
T Consensus 82 ~~l~~~~~~~~~~d~ViH~Aa~~~~~~-~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~ 150 (383)
T d1gy8a_ 82 DFLNGVFTRHGPIDAVVHMCAFLAVGE-SVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGN 150 (383)
T ss_dssp HHHHHHHHHSCCCCEEEECCCCCCHHH-HHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBS
T ss_pred HHhhhhhhccceeehhhcccccccccc-cccccccccccccccccccchhhhccCCcccccccccccccc
Confidence 9988753 247899999999865321 112344567899999999999984 57889999999888764
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.65 E-value=7e-17 Score=134.28 Aligned_cols=127 Identities=15% Similarity=0.161 Sum_probs=91.8
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChh-----HHHHH---hcccCCCCEEEEEecCCChhccchhh-hCCCc
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE-----KATTL---FGKQDEETLQVCKGDTRNPKDLDPAI-FEGVT 153 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~-----~~~~~---~~~~~~~~~~~v~~Di~d~~~v~~~~-~~~~d 153 (214)
|++|||||||+||++|+++|+++||+|++++|... +.+.+ ........++++.+|+++.+.+.+.+ ..++|
T Consensus 2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~D 81 (339)
T d1n7ha_ 2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD 81 (339)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhccc
Confidence 79999999999999999999999999999999542 22221 11122346788999999999888743 23789
Q ss_pred EEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc------CCCeEEEEccccccccCC
Q 028043 154 HVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS------SLKRIVLVSSVGVTKFNE 210 (214)
Q Consensus 154 ~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~------~~~~iV~vSS~~~~~~~~ 210 (214)
+|||+|+..... ...+++...+.+|+.|+.+++++++. ...++++.||...++...
T Consensus 82 ~Vih~Aa~~~~~-~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~ 143 (339)
T d1n7ha_ 82 EVYNLAAQSHVA-VSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTP 143 (339)
T ss_dssp EEEECCSCCCHH-HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSC
T ss_pred hhhhcccccccc-ccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCC
Confidence 999999976521 12234556778999999999988732 334677777777665443
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=99.63 E-value=1.5e-15 Score=123.66 Aligned_cols=126 Identities=9% Similarity=0.025 Sum_probs=85.0
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcC-hhHHHHHhcccC---CCCEEEE-----------------EecCCCh
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD-PEKATTLFGKQD---EETLQVC-----------------KGDTRNP 141 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~-~~~~~~~~~~~~---~~~~~~v-----------------~~Di~d~ 141 (214)
.+++||||++|||+++|++|+++|++|++++|+ ++..+++.+++. +.....+ .+|+++.
T Consensus 3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~ 82 (284)
T d1e7wa_ 3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF 82 (284)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCH
Confidence 479999999999999999999999999998775 444444433321 2333344 4557777
Q ss_pred hccchhh------hCCCcEEEeccCCCCCCC---C---CCCCC-----------CchhHHHHHHHHHHHHHhc-------
Q 028043 142 KDLDPAI------FEGVTHVICCTGTTAFPS---R---RWDGD-----------NTPEKVDWEGVRNLVSALP------- 191 (214)
Q Consensus 142 ~~v~~~~------~~~~d~li~~Ag~~~~~~---~---~~~~~-----------~~~~~vNv~g~~~l~~a~~------- 191 (214)
+++++.+ ++++|+||||||...... . .|+.. ...+.+|+.+++.+.+++.
T Consensus 83 ~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 162 (284)
T d1e7wa_ 83 TRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTP 162 (284)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhH
Confidence 7777632 679999999999875321 1 11110 1246889999998888641
Q ss_pred ---c-CCCeEEEEcccccccc
Q 028043 192 ---S-SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 192 ---~-~~~~iV~vSS~~~~~~ 208 (214)
. +..+||+++|.....+
T Consensus 163 ~~~~~~~~~ii~~~s~~~~~~ 183 (284)
T d1e7wa_ 163 AKHRGTNYSIINMVDAMTNQP 183 (284)
T ss_dssp GGGSCSCEEEEEECCTTTTSC
T ss_pred HHhcCCCCcccccccccccCC
Confidence 1 2347888888776543
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.60 E-value=1.5e-15 Score=118.90 Aligned_cols=122 Identities=29% Similarity=0.459 Sum_probs=95.2
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCe--EEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIK--SRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
.+++||||||+|+||++++++|+++|++ |+.+.|++++.+.+ ..+++++.+|++|.+++.+ ++.++|.|||+
T Consensus 2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~-----~~~~~~~~~d~~~~~~~~~-~~~~~d~vi~~ 75 (252)
T d2q46a1 2 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-----GGEADVFIGDITDADSINP-AFQGIDALVIL 75 (252)
T ss_dssp SCCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-----TCCTTEEECCTTSHHHHHH-HHTTCSEEEEC
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhc-----cCCcEEEEeeecccccccc-ccccceeeEEE
Confidence 3689999999999999999999999975 66678988877654 3457789999999999987 47899999999
Q ss_pred cCCCCCCC------------CCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEcccccccc
Q 028043 159 TGTTAFPS------------RRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 159 Ag~~~~~~------------~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~ 208 (214)
|+...... ...........+|+.|+.+++.... ...+...+.|+...+.+
T Consensus 76 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~ 138 (252)
T d2q46a1 76 TSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNP 138 (252)
T ss_dssp CCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCT
T ss_pred EeeccccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCC
Confidence 98765211 0112234556889999999998774 46788888888776543
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.60 E-value=1.5e-16 Score=129.24 Aligned_cols=109 Identities=18% Similarity=0.123 Sum_probs=84.7
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhC-CCcEEEeccCC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-GVTHVICCTGT 161 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~-~~d~li~~Ag~ 161 (214)
|+||||||+|+||++++++|.++|+.|. ++++... +.+|++|.+.+++.+-+ ++|+|||+||.
T Consensus 1 MKILItG~tGfiG~~l~~~L~~~g~~v~-~~~~~~~---------------~~~Dl~~~~~~~~~i~~~~~D~Vih~Aa~ 64 (298)
T d1n2sa_ 1 MNILLFGKTGQVGWELQRSLAPVGNLIA-LDVHSKE---------------FCGDFSNPKGVAETVRKLRPDVIVNAAAH 64 (298)
T ss_dssp CEEEEECTTSHHHHHHHHHTTTTSEEEE-ECTTCSS---------------SCCCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEE-EECCCcc---------------ccCcCCCHHHHHHHHHHcCCCEEEEeccc
Confidence 5799999999999999999999887554 4443211 23799999998874322 68999999997
Q ss_pred CCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEEcccccccc
Q 028043 162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 162 ~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~vSS~~~~~~ 208 (214)
.... ..+..+...+.+|+.++.+++++++....+++++||..+++.
T Consensus 65 ~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ss~~~~~~ 110 (298)
T d1n2sa_ 65 TAVD-KAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPG 110 (298)
T ss_dssp CCHH-HHTTCHHHHHHHHTHHHHHHHHHHTTTTCEEEEEEEGGGSCC
T ss_pred cccc-ccccCccccccccccccccchhhhhccccccccccccccccC
Confidence 7532 233455667899999999999999877678999999887764
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=99.58 E-value=7.3e-16 Score=124.23 Aligned_cols=130 Identities=11% Similarity=0.082 Sum_probs=93.1
Q ss_pred CCCCCEEEEEcCch--HHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC-CCCEEEEEecCCChhccchhh------h
Q 028043 79 ASSSKLVLVAGGSG--GVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAI------F 149 (214)
Q Consensus 79 ~~~~k~vlITGasg--gIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~v~~Di~d~~~v~~~~------~ 149 (214)
.++||++|||||+| |||+++|+.|+++|++|++.+|+++..+.+.+... .........|+.+.+++++.. +
T Consensus 2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (258)
T d1qsga_ 2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW 81 (258)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhcc
Confidence 36899999999998 89999999999999999999998665444322221 334567889999988776533 4
Q ss_pred CCCcEEEeccCCCCCCCC--------CCCCCCchhHHHHHHHHHHHHHhcc---CCCeEEEEcccccccc
Q 028043 150 EGVTHVICCTGTTAFPSR--------RWDGDNTPEKVDWEGVRNLVSALPS---SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~~--------~~~~~~~~~~vNv~g~~~l~~a~~~---~~~~iV~vSS~~~~~~ 208 (214)
+.+|++||||+....... ..+.....+.+|+.+...+++++.+ ..+.||++||.++..+
T Consensus 82 ~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~ 151 (258)
T d1qsga_ 82 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERA 151 (258)
T ss_dssp SSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB
T ss_pred cccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccC
Confidence 579999999998653221 1111233446677888888887743 3356999999876544
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=99.58 E-value=1.2e-15 Score=123.96 Aligned_cols=83 Identities=7% Similarity=0.075 Sum_probs=66.9
Q ss_pred CCCCCEEEEEcCch--HHHHHHHHHHHHCCCeEEEEEcChhHHHH---HhcccCCCCEEEEEecCCChhccchhh-----
Q 028043 79 ASSSKLVLVAGGSG--GVGQLVVASLLSRNIKSRLLLRDPEKATT---LFGKQDEETLQVCKGDTRNPKDLDPAI----- 148 (214)
Q Consensus 79 ~~~~k~vlITGasg--gIG~~la~~L~~~G~~V~~~~r~~~~~~~---~~~~~~~~~~~~v~~Di~d~~~v~~~~----- 148 (214)
.++||++|||||+| |||+++|++|+++|++|++++|+++..+. +.+. .....+..+|+++++++++.+
T Consensus 2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~ 79 (274)
T d2pd4a1 2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQE--LNSPYVYELDVSKEEHFKSLYNSVKK 79 (274)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHH--TTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhh--CCceeEeeecccchhhHHHHHHHHHH
Confidence 46899999999876 89999999999999999999998643322 2222 345667899999998877643
Q ss_pred -hCCCcEEEeccCCCC
Q 028043 149 -FEGVTHVICCTGTTA 163 (214)
Q Consensus 149 -~~~~d~li~~Ag~~~ 163 (214)
++++|++|||+|...
T Consensus 80 ~~g~id~lV~nag~~~ 95 (274)
T d2pd4a1 80 DLGSLDFIVHSVAFAP 95 (274)
T ss_dssp HTSCEEEEEECCCCCC
T ss_pred HcCCCCeEEeeccccc
Confidence 578999999999865
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=99.57 E-value=1.9e-15 Score=122.21 Aligned_cols=127 Identities=10% Similarity=0.032 Sum_probs=85.0
Q ss_pred CCCCCCEEEEEcC--chHHHHHHHHHHHHCCCeEEEEEcChhHHHH-HhcccCCCCEEEEEecCCChhccchhh------
Q 028043 78 PASSSKLVLVAGG--SGGVGQLVVASLLSRNIKSRLLLRDPEKATT-LFGKQDEETLQVCKGDTRNPKDLDPAI------ 148 (214)
Q Consensus 78 ~~~~~k~vlITGa--sggIG~~la~~L~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~v~~Di~d~~~v~~~~------ 148 (214)
..++||+++|||| +.|||+++|++|+++|++|++++|+.++..+ +.+++ +.+...+++|++++++++...
T Consensus 2 ~~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~-~~~~~~~~~dv~~~~~~~~~~~~v~~~ 80 (268)
T d2h7ma1 2 GLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL-PAKAPLLELDVQNEEHLASLAGRVTEA 80 (268)
T ss_dssp CTTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTS-SSCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHc-CCceeeEeeecccccccccccchhhhc
Confidence 3578999999995 4589999999999999999999999877643 44444 455678899999997766522
Q ss_pred ---hCCCcEEEeccCCCCCCCCC--------CCCCCchhHHHHHHHHHHHHHhcc--CCCeEEEEccccc
Q 028043 149 ---FEGVTHVICCTGTTAFPSRR--------WDGDNTPEKVDWEGVRNLVSALPS--SLKRIVLVSSVGV 205 (214)
Q Consensus 149 ---~~~~d~li~~Ag~~~~~~~~--------~~~~~~~~~vNv~g~~~l~~a~~~--~~~~iV~vSS~~~ 205 (214)
++.+|+++||||........ ++.....+.+|+.+.....++... ....+++++|...
T Consensus 81 ~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~ 150 (268)
T d2h7ma1 81 IGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDP 150 (268)
T ss_dssp HCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCC
T ss_pred cccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcccccccccccccc
Confidence 34689999999976421111 111122335555666666665532 2234444544444
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.57 E-value=1.9e-15 Score=123.92 Aligned_cols=129 Identities=13% Similarity=0.029 Sum_probs=82.8
Q ss_pred CCCCCCEEEEEcCch--HHHHHHHHHHHHCCCeEEEEEcChhHHHHHhc---------cc-C---CCCE-EEEEec--C-
Q 028043 78 PASSSKLVLVAGGSG--GVGQLVVASLLSRNIKSRLLLRDPEKATTLFG---------KQ-D---EETL-QVCKGD--T- 138 (214)
Q Consensus 78 ~~~~~k~vlITGasg--gIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~---------~~-~---~~~~-~~v~~D--i- 138 (214)
++++||++|||||+| |||+++|++|+++|++|++.+|++........ .. . .... ....+| +
T Consensus 4 ~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (297)
T d1d7oa_ 4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFD 83 (297)
T ss_dssp CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCC
T ss_pred cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhcc
Confidence 678999999999886 99999999999999999999997643221100 00 0 0111 223333 2
Q ss_pred -----------------CChhccchh------hhCCCcEEEeccCCCCCCC-----CCCCCCCchhHHHHHHHHHHHHHh
Q 028043 139 -----------------RNPKDLDPA------IFEGVTHVICCTGTTAFPS-----RRWDGDNTPEKVDWEGVRNLVSAL 190 (214)
Q Consensus 139 -----------------~d~~~v~~~------~~~~~d~li~~Ag~~~~~~-----~~~~~~~~~~~vNv~g~~~l~~a~ 190 (214)
.+.+.+++. .++++|+||||||...... .+.+++...+++|+.+++.+++++
T Consensus 84 ~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~ 163 (297)
T d1d7oa_ 84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHF 163 (297)
T ss_dssp SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred ccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHH
Confidence 222222221 1679999999999753211 222334567799999999999987
Q ss_pred cc---CCCeEEEEcccccc
Q 028043 191 PS---SLKRIVLVSSVGVT 206 (214)
Q Consensus 191 ~~---~~~~iV~vSS~~~~ 206 (214)
.+ ..++++.+++.+..
T Consensus 164 ~~~~~~~g~~~~~~~~~~~ 182 (297)
T d1d7oa_ 164 LPIMNPGGASISLTYIASE 182 (297)
T ss_dssp GGGEEEEEEEEEEECGGGT
T ss_pred HHHhhcCCcceeeeehhhc
Confidence 43 22456666665544
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.55 E-value=1.2e-15 Score=119.29 Aligned_cols=115 Identities=21% Similarity=0.284 Sum_probs=84.2
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCC--eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEecc
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~A 159 (214)
.|+||||||||+||++++++|+++|+ +|+...|++... ...+ ..+..|..++...+.+.+|.+||++
T Consensus 2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~--------~~~~---~~~~~d~~~~~~~~~~~~d~vi~~~ 70 (212)
T d2a35a1 2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE--------HPRL---DNPVGPLAELLPQLDGSIDTAFCCL 70 (212)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC--------CTTE---ECCBSCHHHHGGGCCSCCSEEEECC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh--------cccc---cccccchhhhhhccccchheeeeee
Confidence 38999999999999999999999998 577777754221 1223 3444555554444456799999999
Q ss_pred CCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccccccccCC
Q 028043 160 GTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTKFNE 210 (214)
Q Consensus 160 g~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~~~~ 210 (214)
|...... .....+..+|+.++.+++++++ .+.+++|++||.+++....
T Consensus 71 g~~~~~~---~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~~~~ 119 (212)
T d2a35a1 71 GTTIKEA---GSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKSS 119 (212)
T ss_dssp CCCHHHH---SSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCS
T ss_pred eeecccc---ccccccccchhhhhhhcccccccccccccccccccccccccc
Confidence 8753211 1234567899999999999985 5889999999998876543
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=99.53 E-value=3e-14 Score=119.11 Aligned_cols=113 Identities=16% Similarity=0.129 Sum_probs=86.7
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
+.|+|+||||||+||++++++|+++|++|+++.|++++.... ......+++++++|+.|..++.+.++.++|.++++..
T Consensus 2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~-~~~~~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~~~~ 80 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAE-ELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTT 80 (350)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHH-HHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhh-hhcccCCCEEEEeeCCCcHHHHHHHhcCCceEEeecc
Confidence 358999999999999999999999999999999987654321 1112457999999999976654456888999988764
Q ss_pred CCCCCCCCCCCCCchhHHHHHHHHHHHHHh-ccCCCeEEEEccccccc
Q 028043 161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-PSSLKRIVLVSSVGVTK 207 (214)
Q Consensus 161 ~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~-~~~~~~iV~vSS~~~~~ 207 (214)
.. ...|+..+.++++++ +.+..++|+.||.....
T Consensus 81 ~~-------------~~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~ 115 (350)
T d1xgka_ 81 SQ-------------AGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHS 115 (350)
T ss_dssp ST-------------TSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGG
T ss_pred cc-------------cchhhhhhhHHHHHHHHhCCCceEEEeeccccc
Confidence 32 134677788999988 45888888888876543
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=99.49 E-value=2.1e-14 Score=114.08 Aligned_cols=117 Identities=21% Similarity=0.237 Sum_probs=84.5
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh-----hCCCcEEE
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-----FEGVTHVI 156 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~-----~~~~d~li 156 (214)
+|++|||||++|||+++|++|+++|++|++++|+++. .+....++|+++........ ....+.++
T Consensus 1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~----------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 70 (241)
T d1uaya_ 1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG----------EDLIYVEGDVTREEDVRRAVARAQEEAPLFAVV 70 (241)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS----------SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc----------ccceEeeccccchhhhHHHHHhhhccccccchh
Confidence 4899999999999999999999999999999998653 23556889999887666532 23566777
Q ss_pred eccCCCCCCC-------CCCCCCCchhHHHHHHHHHHHHHh----c-------cCCCeEEEEcccccccc
Q 028043 157 CCTGTTAFPS-------RRWDGDNTPEKVDWEGVRNLVSAL----P-------SSLKRIVLVSSVGVTKF 208 (214)
Q Consensus 157 ~~Ag~~~~~~-------~~~~~~~~~~~vNv~g~~~l~~a~----~-------~~~~~iV~vSS~~~~~~ 208 (214)
++++...... ...+..++.+++|+.+...+++.+ . .+.++||++||.++..+
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~ 140 (241)
T d1uaya_ 71 SAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEG 140 (241)
T ss_dssp ECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHC
T ss_pred hhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccC
Confidence 7776543211 111123456788999988877754 1 12358999999987643
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.49 E-value=5.1e-14 Score=117.57 Aligned_cols=127 Identities=13% Similarity=0.124 Sum_probs=87.3
Q ss_pred CCEEEEEc--CchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhc----ccC----------CCCEEEEEe---------
Q 028043 82 SKLVLVAG--GSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFG----KQD----------EETLQVCKG--------- 136 (214)
Q Consensus 82 ~k~vlITG--asggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~----~~~----------~~~~~~v~~--------- 136 (214)
+|++|||| +++|||++++++|+++|++|++.+++......... ... ........+
T Consensus 2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (329)
T d1uh5a_ 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND 81 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGG
T ss_pred CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcc
Confidence 68999999 55799999999999999999999987654322111 000 011122333
Q ss_pred -----------cCCChhccchhh------hCCCcEEEeccCCCCCC-----CCCCCCCCchhHHHHHHHHHHHHHhcc--
Q 028043 137 -----------DTRNPKDLDPAI------FEGVTHVICCTGTTAFP-----SRRWDGDNTPEKVDWEGVRNLVSALPS-- 192 (214)
Q Consensus 137 -----------Di~d~~~v~~~~------~~~~d~li~~Ag~~~~~-----~~~~~~~~~~~~vNv~g~~~l~~a~~~-- 192 (214)
|+++.+++++.+ ++++|+||||||..... ...++++...+++|+.++..+++++.+
T Consensus 82 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m 161 (329)
T d1uh5a_ 82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM 161 (329)
T ss_dssp CCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred cchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhc
Confidence 455655555422 68999999999976421 122334566779999999999998743
Q ss_pred -CCCeEEEEcccccccc
Q 028043 193 -SLKRIVLVSSVGVTKF 208 (214)
Q Consensus 193 -~~~~iV~vSS~~~~~~ 208 (214)
..++||++||.++...
T Consensus 162 ~~~GsIv~iss~~~~~~ 178 (329)
T d1uh5a_ 162 KPQSSIISLTYHASQKV 178 (329)
T ss_dssp EEEEEEEEEECGGGTSC
T ss_pred ccccccccceeehhccc
Confidence 2368999999887654
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=99.47 E-value=3.1e-13 Score=108.65 Aligned_cols=80 Identities=18% Similarity=0.291 Sum_probs=60.1
Q ss_pred EEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhH-HHHHhccc---CCCCEEEEEecCCChhccc----hh------hh
Q 028043 84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-ATTLFGKQ---DEETLQVCKGDTRNPKDLD----PA------IF 149 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~-~~~~~~~~---~~~~~~~v~~Di~d~~~v~----~~------~~ 149 (214)
++|||||++|||+++|++|+++|++|++++|+.++ .+++.+++ ..........|+.+..+.+ +. .+
T Consensus 3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (266)
T d1mxha_ 3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAF 82 (266)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHh
Confidence 78999999999999999999999999999998654 34433332 2445667777776543322 21 16
Q ss_pred CCCcEEEeccCCCC
Q 028043 150 EGVTHVICCTGTTA 163 (214)
Q Consensus 150 ~~~d~li~~Ag~~~ 163 (214)
+++|++|||||...
T Consensus 83 g~iDilvnnAG~~~ 96 (266)
T d1mxha_ 83 GRCDVLVNNASAYY 96 (266)
T ss_dssp SCCCEEEECCCCCC
T ss_pred CCCCEEEECCccCC
Confidence 78999999999875
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.47 E-value=3.8e-14 Score=115.32 Aligned_cols=112 Identities=18% Similarity=0.206 Sum_probs=84.2
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHH----HHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA----TTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~----~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
++||||||||+||++++++|+++|++|++++|++... .+....+...+++++++|++|.+.+.+ .+.+.+.++++
T Consensus 4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~-~~~~~~~~~~~ 82 (312)
T d1qyda_ 4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVD-ALKQVDVVISA 82 (312)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHH-HHTTCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhh-hccCcchhhhh
Confidence 5699999999999999999999999999999975321 111112225678999999999999986 47889999999
Q ss_pred cCCCCCCCCCCCCCCchhHHHHHHHHHHHHHh-ccCCCeEEEEccccccc
Q 028043 159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL-PSSLKRIVLVSSVGVTK 207 (214)
Q Consensus 159 Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~-~~~~~~iV~vSS~~~~~ 207 (214)
++.... ..|..++.++++++ +.+..++++.||.+.+.
T Consensus 83 ~~~~~~------------~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~ 120 (312)
T d1qyda_ 83 LAGGVL------------SHHILEQLKLVEAIKEAGNIKRFLPSEFGMDP 120 (312)
T ss_dssp CCCSSS------------STTTTTHHHHHHHHHHSCCCSEEECSCCSSCT
T ss_pred hhhccc------------ccchhhhhHHHHHHHHhcCCcEEEEeeccccC
Confidence 975431 23445566777766 45667888888876654
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.46 E-value=9e-15 Score=117.95 Aligned_cols=107 Identities=22% Similarity=0.187 Sum_probs=83.5
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhC-CCcEEEeccCC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFE-GVTHVICCTGT 161 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~-~~d~li~~Ag~ 161 (214)
|+||||||||+||++++++|.++|++|++++|+. +|++|.+++++.+-+ ++|+|||+|+.
T Consensus 2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~-------------------~D~~d~~~~~~~l~~~~~d~vih~a~~ 62 (281)
T d1vl0a_ 2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD-------------------LDITNVLAVNKFFNEKKPNVVINCAAH 62 (281)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT-------------------CCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh-------------------ccCCCHHHHHHHHHHcCCCEEEeeccc
Confidence 5799999999999999999999999999998853 589999988874322 78999999997
Q ss_pred CCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEEccccccccC
Q 028043 162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFN 209 (214)
Q Consensus 162 ~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~vSS~~~~~~~ 209 (214)
.... ............|+.....+.+.+......+++.||..+++..
T Consensus 63 ~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ss~~v~~~~ 109 (281)
T d1vl0a_ 63 TAVD-KCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGE 109 (281)
T ss_dssp CCHH-HHHHCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGSCSC
T ss_pred cccc-cccccchhhcccccccccccccccccccccccccccceeeecc
Confidence 6521 1112334456778888888888877666788888888877643
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.36 E-value=4e-13 Score=108.27 Aligned_cols=109 Identities=19% Similarity=0.281 Sum_probs=81.1
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHH-----HhcccCCCCEEEEEecCCChhccchhhhCCCcEEE
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATT-----LFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVI 156 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~-----~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li 156 (214)
.|+||||||||+||++++++|+++|++|++++|+...... ....+...+++++.+|+.+.+...+ .+.+.+.++
T Consensus 3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~~~~vi 81 (307)
T d1qyca_ 3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVE-AVKNVDVVI 81 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHH-HHHTCSEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhh-hhhhceeee
Confidence 4789999999999999999999999999999997543211 1112224568899999999998876 467899999
Q ss_pred eccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEccccccc
Q 028043 157 CCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSSVGVTK 207 (214)
Q Consensus 157 ~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS~~~~~ 207 (214)
|+++... ..++.+++++++ .+..++++.||.+...
T Consensus 82 ~~~~~~~----------------~~~~~~~~~a~~~~~~~~~~~~s~~~~~~ 117 (307)
T d1qyca_ 82 STVGSLQ----------------IESQVNIIKAIKEVGTVKRFFPSEFGNDV 117 (307)
T ss_dssp ECCCGGG----------------SGGGHHHHHHHHHHCCCSEEECSCCSSCT
T ss_pred ecccccc----------------cchhhHHHHHHHHhccccceeeecccccc
Confidence 9987532 223455667664 4777888888865543
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.35 E-value=2.6e-12 Score=102.67 Aligned_cols=103 Identities=17% Similarity=0.245 Sum_probs=72.9
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh-------hCCCcE
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-------FEGVTH 154 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~-------~~~~d~ 154 (214)
||+|+||||++|||+++|++|+++|++|++++|++++ ...|+.+.+..+... .+.+|+
T Consensus 1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~---------------~~~d~~~~~~~~~~~~~~~~~~~~~id~ 65 (257)
T d1fjha_ 1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE---------------VIADLSTAEGRKQAIADVLAKCSKGMDG 65 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS---------------EECCTTSHHHHHHHHHHHHTTCTTCCSE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH---------------HHHHhcCHHHHHHHHHHHHHHhCCCCcE
Confidence 6899999999999999999999999999999997532 235677665554321 246999
Q ss_pred EEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHh----c-cCCCeEEEEccc
Q 028043 155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL----P-SSLKRIVLVSSV 203 (214)
Q Consensus 155 li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~----~-~~~~~iV~vSS~ 203 (214)
++||||.... . +.......+|..+...+.+.. . .....+..+++.
T Consensus 66 lv~~Ag~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (257)
T d1fjha_ 66 LVLCAGLGPQ-T---KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSV 115 (257)
T ss_dssp EEECCCCCTT-C---SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCG
T ss_pred EEEcCCCCCc-H---HHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeec
Confidence 9999997642 1 223345577888887777654 2 233455555554
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.18 E-value=9.3e-12 Score=100.61 Aligned_cols=116 Identities=14% Similarity=0.088 Sum_probs=69.8
Q ss_pred EEEEcCchHHHHHHHHHHHHCCC-eEEEEEcCh--hHHHHHhcccCCCCEEEEE-ecCCChhccchhhhCCCcEEEeccC
Q 028043 85 VLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDP--EKATTLFGKQDEETLQVCK-GDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 85 vlITGasggIG~~la~~L~~~G~-~V~~~~r~~--~~~~~~~~~~~~~~~~~v~-~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
||||||+|+||++++++|+++|+ +|+++++-. .+.....+ ........ .|+.+...... .+..+++++|.|+
T Consensus 2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~aa 77 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVD---LNIADYMDKEDFLIQIMAGE-EFGDVEAIFHEGA 77 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHT---SCCSEEEEHHHHHHHHHTTC-CCSSCCEEEECCS
T ss_pred EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhcccc---cchhhhccchHHHHHHhhhh-cccchhhhhhhcc
Confidence 89999999999999999999996 688876422 11222211 11111111 12111111111 1457899999998
Q ss_pred CCCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCeEEEEccccccc
Q 028043 161 TTAFPSRRWDGDNTPEKVDWEGVRNLVSALPSSLKRIVLVSSVGVTK 207 (214)
Q Consensus 161 ~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~~~~~iV~vSS~~~~~ 207 (214)
...... .........|+.++.+++++++....++|+.||..+++
T Consensus 78 ~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~i~~v~~ss~~~~~ 121 (307)
T d1eq2a_ 78 CSSTTE---WDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYG 121 (307)
T ss_dssp CCCTTC---CCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGT
T ss_pred cccccc---cccccccccccccccccccccccccccccccccccccc
Confidence 665321 23344567789999999998854333456666666554
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.75 E-value=1.9e-08 Score=72.24 Aligned_cols=73 Identities=25% Similarity=0.254 Sum_probs=62.8
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEecc
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~A 159 (214)
|+|+|.|+ |.+|+.+++.|.+.|++|++++++++..+.+.+.. +..++.+|.+|++.++++-....|.++-..
T Consensus 1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~---~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~t 73 (132)
T d1lssa_ 1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI---DALVINGDCTKIKTLEDAGIEDADMYIAVT 73 (132)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC---SSEEEESCTTSHHHHHHTTTTTCSEEEECC
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhh---hhhhccCcccchhhhhhcChhhhhhhcccC
Confidence 68999996 99999999999999999999999999988765433 467899999999999886567889888653
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.60 E-value=2.6e-08 Score=74.59 Aligned_cols=44 Identities=23% Similarity=0.222 Sum_probs=39.5
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhccc
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ 126 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~ 126 (214)
|+|.|+||+|+||+++++.|++.|++|++.+|++++++++.+++
T Consensus 1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i 44 (212)
T d1jaya_ 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEY 44 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHH
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 57889998999999999999999999999999999988776554
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=98.55 E-value=8.8e-08 Score=68.53 Aligned_cols=73 Identities=18% Similarity=0.140 Sum_probs=61.3
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
|+++|.|+ |.+|+.+++.|.+.|++|++++.+++..+++.+ .....+.+|.++++.++++-+.++|.+|-..+
T Consensus 1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~----~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~~ 73 (134)
T d2hmva1 1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS----YATHAVIANATEENELLSLGIRNFEYVIVAIG 73 (134)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTT----TCSEEEECCTTCTTHHHHHTGGGCSEEEECCC
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHH----hCCcceeeecccchhhhccCCccccEEEEEcC
Confidence 56888875 899999999999999999999999999888653 34567889999999998765678898886664
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.43 E-value=5.5e-07 Score=66.60 Aligned_cols=75 Identities=24% Similarity=0.177 Sum_probs=57.4
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
+|+|+|.|| |.+|+.+|+.|.++|++|++++|+.++++++.+.+. .......+..+...... .....|.++....
T Consensus 2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~--~~~~~~~~~~~~~~~~~-~i~~~~~~i~~~~ 76 (182)
T d1e5qa1 2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQ--HSTPISLDVNDDAALDA-EVAKHDLVISLIP 76 (182)
T ss_dssp CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCT--TEEEEECCTTCHHHHHH-HHTTSSEEEECSC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhccc--ccccccccccchhhhHh-hhhccceeEeecc
Confidence 589999986 999999999999999999999999999999877553 23344455555555543 3566777776554
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=98.28 E-value=1.1e-06 Score=65.92 Aligned_cols=75 Identities=20% Similarity=0.116 Sum_probs=55.4
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchh--h--hCCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPA--I--FEGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~--~--~~~~d~li 156 (214)
.|.+|+|+||+|++|...++.....|++|+++++++++.+.+.+. +... ..|..+++..++. . -+++|+++
T Consensus 29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~--Ga~~---vi~~~~~~~~~~~~~~~~~~Gvd~v~ 103 (182)
T d1v3va2 29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQI--GFDA---AFNYKTVNSLEEALKKASPDGYDCYF 103 (182)
T ss_dssp SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT--TCSE---EEETTSCSCHHHHHHHHCTTCEEEEE
T ss_pred CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHhh--hhhh---hcccccccHHHHHHHHhhcCCCceeE
Confidence 578999999999999999999999999999999999887765543 1111 1344444433321 1 23699999
Q ss_pred eccC
Q 028043 157 CCTG 160 (214)
Q Consensus 157 ~~Ag 160 (214)
++.|
T Consensus 104 D~vG 107 (182)
T d1v3va2 104 DNVG 107 (182)
T ss_dssp ESSC
T ss_pred EecC
Confidence 9987
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.25 E-value=4.6e-06 Score=60.50 Aligned_cols=112 Identities=22% Similarity=0.205 Sum_probs=72.9
Q ss_pred EEEEEcCchHHHHHHHHHHHHCCC--eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccCC
Q 028043 84 LVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGT 161 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag~ 161 (214)
+|.|.||+|.+|++++..|+.+|. ++++++.++.+.+.+.-.. ...+.....-+. ..+..+ .+.+.|++|..||.
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~-~~~~~~~~~~~~-~~~~~~-~~~~aDivVitag~ 78 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSH-IETRATVKGYLG-PEQLPD-CLKGCDVVVIPAGV 78 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTT-SSSSCEEEEEES-GGGHHH-HHTTCSEEEECCSC
T ss_pred eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhh-hhhhcCCCeEEc-CCChHH-HhCCCCEEEECCCc
Confidence 699999999999999999998886 6999998876554321111 111111112222 233333 25789999999997
Q ss_pred CCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CCC-eEEEEc
Q 028043 162 TAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLK-RIVLVS 201 (214)
Q Consensus 162 ~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~~-~iV~vS 201 (214)
...+. ++-.+..+.|..-...+++++++ ... .++.+|
T Consensus 79 ~~~~g---~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivvt 117 (144)
T d1mlda1 79 PRKPG---MTRDDLFNTNATIVATLTAACAQHCPDAMICIIS 117 (144)
T ss_dssp CCCTT---CCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred CCCCC---CCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence 54222 23355678999999999998843 444 444444
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=98.24 E-value=7.6e-06 Score=59.43 Aligned_cols=110 Identities=14% Similarity=0.174 Sum_probs=68.4
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCC--CeEEEEEcChhHHHHHhccc-----CCCCEEEEEecCCChhccchhhhCCCc
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQ-----DEETLQVCKGDTRNPKDLDPAIFEGVT 153 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~-----~~~~~~~v~~Di~d~~~v~~~~~~~~d 153 (214)
+.++|.|.|+ |.+|..++..|+.+| .+|+++|+++++.+.....+ ..........| .++ +.+.|
T Consensus 4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d---~~~-----~~~ad 74 (146)
T d1ez4a1 4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGE---YSD-----CKDAD 74 (146)
T ss_dssp TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECC---GGG-----GTTCS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeecc---HHH-----hcccc
Confidence 4578999995 999999999999987 58999999987654322111 11122333333 222 35789
Q ss_pred EEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCCCeEEEEcc
Q 028043 154 HVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSLKRIVLVSS 202 (214)
Q Consensus 154 ~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~~~iV~vSS 202 (214)
++|..||....+. +.-.+....|+.-...+++.+. ...+.++.+-|
T Consensus 75 ivvitag~~~~~g---~~r~~l~~~N~~i~~~~~~~i~~~~p~aivivvt 121 (146)
T d1ez4a1 75 LVVITAGAPQKPG---ESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA 121 (146)
T ss_dssp EEEECCCC-------------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred EEEEecccccCCC---CCHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeC
Confidence 9999999765332 2334456889888888888774 34444444443
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.23 E-value=9.7e-06 Score=58.79 Aligned_cols=110 Identities=16% Similarity=0.183 Sum_probs=69.4
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCC--eEEEEEcChh--HHHH----HhcccC--CCCEEEEEecCCChhccchhhhCCC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPE--KATT----LFGKQD--EETLQVCKGDTRNPKDLDPAIFEGV 152 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~--~~~~----~~~~~~--~~~~~~v~~Di~d~~~v~~~~~~~~ 152 (214)
|+|.|.||+|.+|..++..|+.+|. ++.+++++++ +.+. +.+... ....+....--.|. + .+.+.
T Consensus 1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~---~--~l~~a 75 (145)
T d1hyea1 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENL---R--IIDES 75 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCG---G--GGTTC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchH---H--Hhccc
Confidence 5799999999999999999999984 8999998753 2221 221111 12222221111122 2 24679
Q ss_pred cEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CCCeEEEE
Q 028043 153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLV 200 (214)
Q Consensus 153 d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~~~iV~v 200 (214)
|++|..||....+.+ +-.+.++.|..-...+++.+++ ..+.|+.+
T Consensus 76 DvVVitAG~~~~~g~---sR~dl~~~Na~iv~~i~~~i~~~~~~~iivV 121 (145)
T d1hyea1 76 DVVIITSGVPRKEGM---SRMDLAKTNAKIVGKYAKKIAEICDTKIFVI 121 (145)
T ss_dssp SEEEECCSCCCCTTC---CHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
T ss_pred eEEEEecccccCCCC---ChhhhhhhhHHHHHHHHHHHhccCCCeEEEE
Confidence 999999997543222 2234568888888888887743 44555544
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=98.22 E-value=2.1e-06 Score=62.60 Aligned_cols=76 Identities=14% Similarity=0.197 Sum_probs=62.3
Q ss_pred EEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
+++|.|. |.+|+.++++|.+.|++|++++.++++..+..+.....++.++.+|.+|++.++++-.+..|.+|-+.+
T Consensus 5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~~ 80 (153)
T d1id1a_ 5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSD 80 (153)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSS
T ss_pred EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcchHHHHHhccccCCEEEEccc
Confidence 5889995 899999999999999999999998876544333333457889999999999998876778999987764
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.15 E-value=4.1e-06 Score=62.24 Aligned_cols=75 Identities=20% Similarity=0.217 Sum_probs=55.3
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchh--hh--CCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPA--IF--EGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~--~~--~~~d~li 156 (214)
.+.+|+|+||+|++|...++.+...|++|+++++++++.+.+++ +.. . + ..|.++.+..++. .. .++|+++
T Consensus 28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~~-~Ga-~-~--vi~~~~~~~~~~i~~~t~~~g~d~v~ 102 (174)
T d1yb5a2 28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQ-NGA-H-E--VFNHREVNYIDKIKKYVGEKGIDIII 102 (174)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTC-S-E--EEETTSTTHHHHHHHHHCTTCEEEEE
T ss_pred CCCEEEEEeccccccccccccccccCcccccccccccccccccc-cCc-c-c--ccccccccHHHHhhhhhccCCceEEe
Confidence 57899999999999999999999999999999999887766543 321 1 1 2466665443331 12 2599999
Q ss_pred eccC
Q 028043 157 CCTG 160 (214)
Q Consensus 157 ~~Ag 160 (214)
.+.|
T Consensus 103 d~~g 106 (174)
T d1yb5a2 103 EMLA 106 (174)
T ss_dssp ESCH
T ss_pred eccc
Confidence 9887
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=98.14 E-value=2.9e-06 Score=62.55 Aligned_cols=74 Identities=24% Similarity=0.268 Sum_probs=57.7
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
++.+++|+|.|+ |.+|+.+++.|...|+ ++.++.|+.++.+++.+++. ... .+.+++.+ .+...|+||+
T Consensus 21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~---~~~-----~~~~~~~~-~l~~~Divi~ 90 (159)
T d1gpja2 21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG---GEA-----VRFDELVD-HLARSDVVVS 90 (159)
T ss_dssp CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT---CEE-----CCGGGHHH-HHHTCSEEEE
T ss_pred CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhh---ccc-----ccchhHHH-HhccCCEEEE
Confidence 346799999997 9999999999999998 59999999999888876653 121 23345554 3568999999
Q ss_pred ccCCC
Q 028043 158 CTGTT 162 (214)
Q Consensus 158 ~Ag~~ 162 (214)
+.+..
T Consensus 91 atss~ 95 (159)
T d1gpja2 91 ATAAP 95 (159)
T ss_dssp CCSSS
T ss_pred ecCCC
Confidence 98854
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=98.12 E-value=2.1e-06 Score=64.40 Aligned_cols=76 Identities=21% Similarity=0.208 Sum_probs=52.1
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCC--hhccchhhhCCCcEEEec
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN--PKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d--~~~v~~~~~~~~d~li~~ 158 (214)
.+.+|||+||+||+|...++.....|++|+++++++++.+.+.+. +... ++ |-.+ .+.++..--+++|++|.+
T Consensus 31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~l--Ga~~-vi--~~~~~~~~~~~~~~~~gvD~vid~ 105 (176)
T d1xa0a2 31 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVL--GAKE-VL--AREDVMAERIRPLDKQRWAAAVDP 105 (176)
T ss_dssp GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHT--TCSE-EE--ECC---------CCSCCEEEEEEC
T ss_pred CCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHhc--ccce-ee--ecchhHHHHHHHhhccCcCEEEEc
Confidence 467899999999999999999989999999999998887765432 2221 12 2222 122221112379999999
Q ss_pred cCC
Q 028043 159 TGT 161 (214)
Q Consensus 159 Ag~ 161 (214)
.|-
T Consensus 106 vgg 108 (176)
T d1xa0a2 106 VGG 108 (176)
T ss_dssp STT
T ss_pred CCc
Confidence 984
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=98.10 E-value=2.4e-05 Score=56.67 Aligned_cols=113 Identities=19% Similarity=0.223 Sum_probs=68.9
Q ss_pred CEEEEEcCchHHHHHHHHHHHH-C--CCeEEEEEcChhHHHHHhcccC-CCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 83 KLVLVAGGSGGVGQLVVASLLS-R--NIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~-~--G~~V~~~~r~~~~~~~~~~~~~-~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
|+|.|+|++|.+|++++..|+. . +.++.+++..+....+..+... ....... . +...++.+ .+.+.|++|..
T Consensus 1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~~~~~~~-~-~~~~~~~~--~~~~aDvvvit 76 (145)
T d2cmda1 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIK-G-FSGEDATP--ALEGADVVLIS 76 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSCSSCEEE-E-ECSSCCHH--HHTTCSEEEEC
T ss_pred CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCccccCCc-E-EEcCCCcc--ccCCCCEEEEC
Confidence 5899999999999999998864 3 4689999986532111111111 1111111 1 12222233 25679999999
Q ss_pred cCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CC-CeEEEEcc
Q 028043 159 TGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL-KRIVLVSS 202 (214)
Q Consensus 159 Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~-~~iV~vSS 202 (214)
||...-+. ++-.+....|..-...+.+.+.+ .. ..+|.+|.
T Consensus 77 aG~~~k~g---~~R~dl~~~N~~i~~~v~~~i~~~~p~aivivvtN 119 (145)
T d2cmda1 77 AGVRRKPG---MDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITN 119 (145)
T ss_dssp CSCCCCTT---CCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred CCccCCCC---cchhhHHHHHHHHHHHHHHHHHhhCCCcEEEEccC
Confidence 99864222 23455678899988989888743 33 34555553
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=98.08 E-value=2.4e-06 Score=55.27 Aligned_cols=43 Identities=26% Similarity=0.265 Sum_probs=38.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHh
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLF 123 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~ 123 (214)
.+++++|+||+||+|...++.+...|++|+++++++++.+.+.
T Consensus 31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~ 73 (77)
T d1o8ca2 31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK 73 (77)
T ss_dssp GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH
T ss_pred CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHH
Confidence 4679999999999999999988899999999999998877654
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=98.07 E-value=5.3e-05 Score=54.87 Aligned_cols=109 Identities=19% Similarity=0.270 Sum_probs=71.3
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC--eEEEEEcChhHHHHHhcccC------CCCEEEEEecCCChhccchhhhCCC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQD------EETLQVCKGDTRNPKDLDPAIFEGV 152 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~------~~~~~~v~~Di~d~~~v~~~~~~~~ 152 (214)
.+++|.|.|| |.+|+.++..|+.+|. +++++|+++++++.....+. .....+...| .++ +.+.
T Consensus 5 ~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d---~~~-----l~da 75 (148)
T d1ldna1 5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGD---YDD-----CRDA 75 (148)
T ss_dssp TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECC---GGG-----TTTC
T ss_pred CCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECC---HHH-----hccc
Confidence 4678999996 9999999999999875 79999999877543221111 1223332222 222 4578
Q ss_pred cEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CC-CeEEEEc
Q 028043 153 THVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SL-KRIVLVS 201 (214)
Q Consensus 153 d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~-~~iV~vS 201 (214)
|++|..||....+. +.-.+....|..-...+++.+++ .. ..++.+|
T Consensus 76 Dvvvitag~~~~~~---~~R~dl~~~N~~i~~~i~~~i~~~~p~a~~ivvt 123 (148)
T d1ldna1 76 DLVVICAGANQKPG---ETRLDLVDKNIAIFRSIVESVMASGFQGLFLVAT 123 (148)
T ss_dssp SEEEECCSCCCCTT---TCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred eeEEEecccccccC---cchhHHHHHHHHHHHHHHHHHHhhCCCceEEEec
Confidence 99999999765322 23345668888888888887633 33 3455544
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.05 E-value=4.3e-06 Score=62.36 Aligned_cols=75 Identities=21% Similarity=0.213 Sum_probs=54.8
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchh--hh--CCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPA--IF--EGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~--~~--~~~d~li 156 (214)
.+++|+|+||+|++|...++.+...|++|+++++++++.+.+.+ . +.. ...|..+++-.++. .. .++|+++
T Consensus 25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~~-~---Ga~-~vi~~~~~~~~~~v~~~t~~~g~d~v~ 99 (183)
T d1pqwa_ 25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR-L---GVE-YVGDSRSVDFADEILELTDGYGVDVVL 99 (183)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT-T---CCS-EEEETTCSTHHHHHHHHTTTCCEEEEE
T ss_pred CCCEEEEECCCCCcccccchhhccccccceeeeccccccccccc-c---ccc-ccccCCccCHHHHHHHHhCCCCEEEEE
Confidence 46899999999999999999998899999999999888776553 2 122 12355554332321 12 3699999
Q ss_pred eccC
Q 028043 157 CCTG 160 (214)
Q Consensus 157 ~~Ag 160 (214)
.+.|
T Consensus 100 d~~g 103 (183)
T d1pqwa_ 100 NSLA 103 (183)
T ss_dssp ECCC
T ss_pred eccc
Confidence 9987
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=98.05 E-value=4e-06 Score=62.30 Aligned_cols=74 Identities=16% Similarity=0.215 Sum_probs=52.8
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
.+++|+|+||+|++|...++.+...|++|+++++++++.+.+.+ +. +.. ..|..+...... ..+++|+++.+.|
T Consensus 27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~-lG---a~~-~i~~~~~~~~~~-~~~g~D~v~d~~G 100 (171)
T d1iz0a2 27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA-LG---AEE-AATYAEVPERAK-AWGGLDLVLEVRG 100 (171)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH-TT---CSE-EEEGGGHHHHHH-HTTSEEEEEECSC
T ss_pred CCCEEEEEeccccchhhhhhhhcccccccccccccccccccccc-cc---cce-eeehhhhhhhhh-ccccccccccccc
Confidence 57899999999999999999998999999999999887766543 21 111 124433221111 1357999999876
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=98.03 E-value=6e-06 Score=61.37 Aligned_cols=76 Identities=17% Similarity=0.115 Sum_probs=56.3
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchh--hh--CCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPA--IF--EGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~--~~--~~~d~li 156 (214)
.+++|+|+||+|++|...++.....|++|+++++++++.+.+++. . .. ...|.++++-.++. +. .++|+++
T Consensus 28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~l-G-a~---~vi~~~~~d~~~~v~~~t~g~g~d~v~ 102 (179)
T d1qora2 28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKA-G-AW---QVINYREEDLVERLKEITGGKKVRVVY 102 (179)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHH-T-CS---EEEETTTSCHHHHHHHHTTTCCEEEEE
T ss_pred CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHhc-C-Ce---EEEECCCCCHHHHHHHHhCCCCeEEEE
Confidence 468999999999999999999999999999999999988776532 2 11 22466664433321 12 2589999
Q ss_pred eccCC
Q 028043 157 CCTGT 161 (214)
Q Consensus 157 ~~Ag~ 161 (214)
.+.|.
T Consensus 103 d~~g~ 107 (179)
T d1qora2 103 DSVGR 107 (179)
T ss_dssp ECSCG
T ss_pred eCccH
Confidence 98874
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=98.03 E-value=1e-05 Score=60.72 Aligned_cols=82 Identities=15% Similarity=0.157 Sum_probs=61.1
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHh---cccC-CCCEEEEEecCCChhccchhhhCCCc
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLF---GKQD-EETLQVCKGDTRNPKDLDPAIFEGVT 153 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~---~~~~-~~~~~~v~~Di~d~~~v~~~~~~~~d 153 (214)
++++|+|+|.|+ ||.|++++..|++.|. ++++..|++++.+.+. +.+. .........|+.+.+.+... ....|
T Consensus 15 ~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d 92 (182)
T d1vi2a1 15 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEA-LASAD 92 (182)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHH-HHTCS
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhh-hcccc
Confidence 457899999995 8999999999999998 5889999876654432 2221 12344567889888877753 56899
Q ss_pred EEEeccCCC
Q 028043 154 HVICCTGTT 162 (214)
Q Consensus 154 ~li~~Ag~~ 162 (214)
++||+....
T Consensus 93 iiIN~Tp~G 101 (182)
T d1vi2a1 93 ILTNGTKVG 101 (182)
T ss_dssp EEEECSSTT
T ss_pred eeccccCCc
Confidence 999998654
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=98.01 E-value=4.1e-06 Score=62.84 Aligned_cols=74 Identities=19% Similarity=0.103 Sum_probs=51.3
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
+..|+|+||+||+|...++.....|++|+++++++++.+.+.+ + +...+ .|..+.+..+...-...|.+|.+.|
T Consensus 32 ~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~~-l---Gad~v-i~~~~~~~~~~l~~~~~~~vvD~Vg 105 (177)
T d1o89a2 32 DGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKS-L---GASRV-LPRDEFAESRPLEKQVWAGAIDTVG 105 (177)
T ss_dssp GCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH-H---TEEEE-EEGGGSSSCCSSCCCCEEEEEESSC
T ss_pred CCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHHh-h---ccccc-cccccHHHHHHHHhhcCCeeEEEcc
Confidence 4589999999999999999999999999999999988766543 2 22222 3433333333211124688887776
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=97.98 E-value=2.2e-06 Score=63.73 Aligned_cols=75 Identities=23% Similarity=0.197 Sum_probs=51.7
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCC--hhccchhhhCCCcEEEecc
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN--PKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d--~~~v~~~~~~~~d~li~~A 159 (214)
+..|||+||+||+|...++.....|++|+++++++++.+.+.+.- ... ++ |-.+ .+.++...-+++|+++.+.
T Consensus 24 ~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~lG--ad~-vi--~~~~~~~~~~~~~~~~gvd~vid~v 98 (167)
T d1tt7a2 24 KGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLG--ASE-VI--SREDVYDGTLKALSKQQWQGAVDPV 98 (167)
T ss_dssp GCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHT--CSE-EE--EHHHHCSSCCCSSCCCCEEEEEESC
T ss_pred CCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHhhc--ccc-eE--eccchhchhhhcccCCCceEEEecC
Confidence 457999999999999999988889999999999988877764432 222 11 2211 1222221124699999988
Q ss_pred CC
Q 028043 160 GT 161 (214)
Q Consensus 160 g~ 161 (214)
|-
T Consensus 99 gg 100 (167)
T d1tt7a2 99 GG 100 (167)
T ss_dssp CT
T ss_pred cH
Confidence 73
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=97.93 E-value=3.7e-05 Score=56.53 Aligned_cols=110 Identities=14% Similarity=0.146 Sum_probs=71.6
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC--eEEEEEcChhHHHHHhcccC------CCCEEEEEecCCChhccchhhhCC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQD------EETLQVCKGDTRNPKDLDPAIFEG 151 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~------~~~~~~v~~Di~d~~~v~~~~~~~ 151 (214)
.+.++|.|.|+ |.+|..++..|+.+|. ++++++++++..+.....+. .... .+. -.|.++ +.+
T Consensus 18 ~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~-~~~--~~d~~~-----~~~ 88 (160)
T d1i0za1 18 VPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPK-IVA--DKDYSV-----TAN 88 (160)
T ss_dssp CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSE-EEE--CSSGGG-----GTT
T ss_pred CCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCe-EEe--ccchhh-----ccc
Confidence 34579999996 9999999999999987 79999999876543221111 1111 111 122222 457
Q ss_pred CcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CCC-eEEEEc
Q 028043 152 VTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLK-RIVLVS 201 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~~-~iV~vS 201 (214)
.|+||..||....+. ++-.+....|+.-...+++.+++ ..+ -+|++|
T Consensus 89 adiVVitAg~~~~~g---~tR~~l~~~N~~i~~~i~~~i~~~~p~aiiivvt 137 (160)
T d1i0za1 89 SKIVVVTAGVRQQEG---ESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVVS 137 (160)
T ss_dssp CSEEEECCSCCCCTT---CCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred ccEEEEecCCccccC---cchHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence 899999999865332 23345667888888888887743 433 455544
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=97.92 E-value=1.7e-05 Score=59.26 Aligned_cols=112 Identities=14% Similarity=0.073 Sum_probs=67.9
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCC---C----eEEEEEcChh--HHHHHhccc---CCCCEEEEEecCCChhccchhhh
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRN---I----KSRLLLRDPE--KATTLFGKQ---DEETLQVCKGDTRNPKDLDPAIF 149 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G---~----~V~~~~r~~~--~~~~~~~~~---~~~~~~~v~~Di~d~~~v~~~~~ 149 (214)
..+|.||||+|.||+.++..|++.+ . .+.+++.+.. .++.+.-++ .......+..- ++ ..+ .+
T Consensus 24 ~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~-~~---~~~-~~ 98 (175)
T d7mdha1 24 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIG-ID---PYE-VF 98 (175)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE-SC---HHH-HT
T ss_pred CcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCcccc-cc---chh-hc
Confidence 3489999999999999999998753 2 4555565442 233322111 12222222211 11 122 36
Q ss_pred CCCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc--C-CCeEEEEc
Q 028043 150 EGVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS--S-LKRIVLVS 201 (214)
Q Consensus 150 ~~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~--~-~~~iV~vS 201 (214)
.+.|++|-.||....+. +.-.+.+..|..-...+.+++.+ . ..+|+.+|
T Consensus 99 ~~aDvVvi~ag~~rkpg---~tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~ 150 (175)
T d7mdha1 99 EDVDWALLIGAKPRGPG---MERAALLDINGQIFADQGKALNAVASKNVKVLVVG 150 (175)
T ss_dssp TTCSEEEECCCCCCCTT---CCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred cCCceEEEeeccCCCCC---CcHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEec
Confidence 78999999999865332 33345678888888888888843 2 23555554
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=97.91 E-value=1.9e-05 Score=58.50 Aligned_cols=76 Identities=20% Similarity=0.220 Sum_probs=55.5
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCC-CEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEE-TLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
..++|+|+|.| +||.+++++..|.+.|.+|.++.|+.++.+++.+.+... .+.. .+. ++.. ....|++||
T Consensus 15 ~~~~k~vlIlG-aGGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~--~~~---~~~~---~~~~dliIN 85 (170)
T d1nyta1 15 IRPGLRILLIG-AGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQA--LSM---DELE---GHEFDLIIN 85 (170)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEE--CCS---GGGT---TCCCSEEEE
T ss_pred CCCCCEEEEEC-CcHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcccccc--ccc---cccc---ccccceeec
Confidence 34689999999 599999999999999999999999999988876654321 2222 222 1111 246899999
Q ss_pred ccCCCC
Q 028043 158 CTGTTA 163 (214)
Q Consensus 158 ~Ag~~~ 163 (214)
+.....
T Consensus 86 ~Tp~G~ 91 (170)
T d1nyta1 86 ATSSGI 91 (170)
T ss_dssp CCSCGG
T ss_pred ccccCc
Confidence 986543
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=97.88 E-value=3.9e-05 Score=55.93 Aligned_cols=111 Identities=10% Similarity=0.054 Sum_probs=66.9
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCC---------eEEEEEcChhHHHHHhcccC---CCCEEEEEecCCChhccchhhhC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNI---------KSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAIFE 150 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~---------~V~~~~r~~~~~~~~~~~~~---~~~~~~v~~Di~d~~~v~~~~~~ 150 (214)
++|.|+||+|.+|+.++..|+..+. ++....++.+..+....... ......+...-.+.+ .+.
T Consensus 5 ~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 79 (154)
T d1y7ta1 5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKV-----AFK 79 (154)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHH-----HTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCchhh-----hcc
Confidence 5899999999999999999998653 12222334444443322111 223333333322222 256
Q ss_pred CCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc--C-CCeEEEEc
Q 028043 151 GVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS--S-LKRIVLVS 201 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~--~-~~~iV~vS 201 (214)
+.|++|..||....+. ++-.+.+..|+.-...+.+.+.+ . ...|+.+|
T Consensus 80 ~advViitaG~~~~pg---~~r~dl~~~N~~i~~~~~~~i~k~a~~~~~vivvs 130 (154)
T d1y7ta1 80 DADYALLVGAAPRKAG---MERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVG 130 (154)
T ss_dssp TCSEEEECCCCCCCTT---CCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred cccEEEeecCcCCCCC---CcHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEec
Confidence 7999999999865322 23345667788888888887743 2 23455555
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=97.84 E-value=0.00013 Score=52.24 Aligned_cols=98 Identities=15% Similarity=0.024 Sum_probs=63.1
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCC--CeEEEEEcChhHHHHHhcccC------CCCEEEEEecCCChhccchhhhCCCcE
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPEKATTLFGKQD------EETLQVCKGDTRNPKDLDPAIFEGVTH 154 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~------~~~~~~v~~Di~d~~~v~~~~~~~~d~ 154 (214)
|+|.|+|| |.+|+.++..|+..| .+++++|+++++++.....+. .....+... .|.++ +.+.|+
T Consensus 1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~~~-----~~dadv 72 (142)
T d1guza1 1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYAD-----TANSDI 72 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGGG-----GTTCSE
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCHHH-----hcCCeE
Confidence 57889996 999999999999987 489999998876543211110 122222221 22222 467899
Q ss_pred EEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc
Q 028043 155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP 191 (214)
Q Consensus 155 li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~ 191 (214)
+|..||....+. +.-.+....|..-...+++.+.
T Consensus 73 vvitag~~~~~g---~~r~~l~~~N~~i~~~i~~~i~ 106 (142)
T d1guza1 73 VIITAGLPRKPG---MTREDLLMKNAGIVKEVTDNIM 106 (142)
T ss_dssp EEECCSCCCCTT---CCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEecCCCCC---CchHHHHHHHHHHHHHHHHHhh
Confidence 999999754222 2223445667777777777774
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=97.84 E-value=7e-05 Score=54.58 Aligned_cols=117 Identities=15% Similarity=0.134 Sum_probs=71.7
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccC------CCCEEEEEecCCChhccchhhhCC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQD------EETLQVCKGDTRNPKDLDPAIFEG 151 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~------~~~~~~v~~Di~d~~~v~~~~~~~ 151 (214)
..+.++|.|.|+ |.+|+.++..|+..|. ++++++.+++.++.....+. ....... ++ ...+. .+.+
T Consensus 4 ~~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~-~~----~~~~~-~~~~ 76 (154)
T d1pzga1 4 VQRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVR-AE----YSYEA-ALTG 76 (154)
T ss_dssp CSCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEE-EE----CSHHH-HHTT
T ss_pred ccCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEe-cc----Cchhh-hhcC
Confidence 345689999997 9999999998888775 79999988765543322111 1111111 11 11122 2567
Q ss_pred CcEEEeccCCCCCCCCCC--CCCCchhHHHHHHHHHHHHHhcc-CCCeEEEEcc
Q 028043 152 VTHVICCTGTTAFPSRRW--DGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSS 202 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~~~~--~~~~~~~~vNv~g~~~l~~a~~~-~~~~iV~vSS 202 (214)
.|++|..||....+.... ..-.+....|..-...+++.+++ ...-++.+-|
T Consensus 77 adiVvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~p~aiviivs 130 (154)
T d1pzga1 77 ADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVT 130 (154)
T ss_dssp CSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred CCeEEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcCCCcEEEEeC
Confidence 999999999876433211 12244567788888888887743 4444444433
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=97.82 E-value=3.6e-05 Score=57.09 Aligned_cols=76 Identities=22% Similarity=0.243 Sum_probs=55.3
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCC-CCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDE-ETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
..++|+|+|.| +||.+++++..|.+.+.+|+++.|+.++.+.+.+.+.. ..+.....|- . .....|++||
T Consensus 15 ~~~~k~vlIlG-aGGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~-----~---~~~~~diiIN 85 (171)
T d1p77a1 15 LRPNQHVLILG-AGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDS-----I---PLQTYDLVIN 85 (171)
T ss_dssp CCTTCEEEEEC-CSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG-----C---CCSCCSEEEE
T ss_pred CCCCCEEEEEC-CcHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhcc-----c---cccccceeee
Confidence 35689999999 68889999999999888999999999998887665431 2333333221 1 1357899999
Q ss_pred ccCCCC
Q 028043 158 CTGTTA 163 (214)
Q Consensus 158 ~Ag~~~ 163 (214)
+.....
T Consensus 86 ~tp~g~ 91 (171)
T d1p77a1 86 ATSAGL 91 (171)
T ss_dssp CCCC--
T ss_pred cccccc
Confidence 987654
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=97.81 E-value=0.00014 Score=52.46 Aligned_cols=110 Identities=15% Similarity=0.150 Sum_probs=67.8
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCC--eEEEEEcChhHHHHHhcccC------CCCEEEEEecCCChhccchhhhCCCcE
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQD------EETLQVCKGDTRNPKDLDPAIFEGVTH 154 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~------~~~~~~v~~Di~d~~~v~~~~~~~~d~ 154 (214)
|+|.|.|+ |.+|..++..|+.+|. +++++++++++++.....+. ........ .|.++ +.+.|+
T Consensus 2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~---~d~~~-----l~~adi 72 (146)
T d1hyha1 2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVI---NDWAA-----LADADV 72 (146)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEE---SCGGG-----GTTCSE
T ss_pred CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceec---cCHHH-----hccccE
Confidence 78999995 9999999999998874 79999999887543221111 12222222 23332 357899
Q ss_pred EEeccCCCCCCCCC-CCCCCchhHHHHHHHHHHHHHhcc-CCCe-EEEEc
Q 028043 155 VICCTGTTAFPSRR-WDGDNTPEKVDWEGVRNLVSALPS-SLKR-IVLVS 201 (214)
Q Consensus 155 li~~Ag~~~~~~~~-~~~~~~~~~vNv~g~~~l~~a~~~-~~~~-iV~vS 201 (214)
+|..||........ -++-.+..+.|..-...+.+.+++ ...- +|.+|
T Consensus 73 VVitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~~p~aivivvt 122 (146)
T d1hyha1 73 VISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVIS 122 (146)
T ss_dssp EEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred EEEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEec
Confidence 99999975422111 112234567788888888887743 3333 44443
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.80 E-value=2.2e-05 Score=57.82 Aligned_cols=76 Identities=16% Similarity=0.254 Sum_probs=53.4
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
.|.+|+|.|+ |++|...++.+...|++|+++++++++++...+ +. .. +++ |..+.+...+...++.|.++.+.|
T Consensus 27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~-lG-a~-~~i--~~~~~~~~~~~~~~~~d~vi~~~~ 100 (168)
T d1piwa2 27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK-MG-AD-HYI--ATLEEGDWGEKYFDTFDLIVVCAS 100 (168)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-HT-CS-EEE--EGGGTSCHHHHSCSCEEEEEECCS
T ss_pred CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhhc-cC-Cc-EEe--eccchHHHHHhhhcccceEEEEec
Confidence 4679999996 999999998888899999999999988876543 22 22 222 333333333333567899999877
Q ss_pred CC
Q 028043 161 TT 162 (214)
Q Consensus 161 ~~ 162 (214)
..
T Consensus 101 ~~ 102 (168)
T d1piwa2 101 SL 102 (168)
T ss_dssp CS
T ss_pred CC
Confidence 54
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.79 E-value=0.0002 Score=52.36 Aligned_cols=110 Identities=17% Similarity=0.159 Sum_probs=69.8
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC--eEEEEEcChhHHHHHhcccC------CCCEEEEEecCCChhccchhhhCC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQD------EETLQVCKGDTRNPKDLDPAIFEG 151 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~------~~~~~~v~~Di~d~~~v~~~~~~~ 151 (214)
++..+|.|.|+ |.+|..++..|+.+|. ++++++++++.++.....+. .... .+.. .|.++ ..+
T Consensus 17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~-~~~~--~d~~~-----~~~ 87 (159)
T d2ldxa1 17 LSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPK-IVFG--KDYNV-----SAN 87 (159)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCE-EEEE--SSGGG-----GTT
T ss_pred CCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCe-EEec--cchhh-----hcc
Confidence 34457999996 9999999999999876 79999999876543221111 1111 1211 12222 357
Q ss_pred CcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cCC-CeEEEEc
Q 028043 152 VTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALP-SSL-KRIVLVS 201 (214)
Q Consensus 152 ~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~-~~~-~~iV~vS 201 (214)
.|++|..||....+. +.-.+.++.|..-...+.+.++ ... +.++.+|
T Consensus 88 adivvitag~~~~~~---~~R~dll~~N~~i~~~i~~~i~~~~p~~ivivvt 136 (159)
T d2ldxa1 88 SKLVIITAGARMVSG---QTRLDLLQRNVAIMKAIVPGVIQNSPDCKIIVVT 136 (159)
T ss_dssp EEEEEECCSCCCCTT---TCSSCTTHHHHHHHHHHTTTHHHHSTTCEEEECS
T ss_pred ccEEEEecccccCCC---CCHHHHHHHHHHHHHHHHHHHhccCCCeEEEEeC
Confidence 899999999865332 2333456888888888777663 233 3455554
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=97.78 E-value=4.8e-05 Score=55.85 Aligned_cols=77 Identities=18% Similarity=0.190 Sum_probs=52.9
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCC--Chhccchhh---h-CCCcE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTR--NPKDLDPAI---F-EGVTH 154 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~--d~~~v~~~~---~-~~~d~ 154 (214)
.+.+|+|+| +|+||...++.+...|++|+++++++++++...+. +... .+..|-. +.+.+.+.+ . +++|+
T Consensus 26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~~--ga~~-~~~~~~~~~~~~~~~~~~~~~~g~g~D~ 101 (170)
T d1e3ja2 26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNC--GADV-TLVVDPAKEEESSIIERIRSAIGDLPNV 101 (170)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT--TCSE-EEECCTTTSCHHHHHHHHHHHSSSCCSE
T ss_pred CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHHc--CCcE-EEeccccccccchhhhhhhcccccCCce
Confidence 457899998 68999999999989999999999999998765442 1222 2223332 222222211 2 36999
Q ss_pred EEeccCC
Q 028043 155 VICCTGT 161 (214)
Q Consensus 155 li~~Ag~ 161 (214)
+|.++|.
T Consensus 102 vid~~g~ 108 (170)
T d1e3ja2 102 TIDCSGN 108 (170)
T ss_dssp EEECSCC
T ss_pred eeecCCC
Confidence 9999984
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=97.78 E-value=5.2e-05 Score=55.72 Aligned_cols=75 Identities=13% Similarity=0.160 Sum_probs=55.3
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
.|.+|+|.|+ |+||...++.+...|++++++++++++.+... ++.. . ...|..+.+.... ..+++|++|.+.|
T Consensus 30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~-~lGa-d---~~i~~~~~~~~~~-~~~~~D~vid~~g 102 (168)
T d1uufa2 30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK-ALGA-D---EVVNSRNADEMAA-HLKSFDFILNTVA 102 (168)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HHTC-S---EEEETTCHHHHHT-TTTCEEEEEECCS
T ss_pred CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHHh-ccCC-c---EEEECchhhHHHH-hcCCCceeeeeee
Confidence 4689999986 89999999888889999999999988876543 3321 1 2246666554443 3467999999998
Q ss_pred CC
Q 028043 161 TT 162 (214)
Q Consensus 161 ~~ 162 (214)
..
T Consensus 103 ~~ 104 (168)
T d1uufa2 103 AP 104 (168)
T ss_dssp SC
T ss_pred cc
Confidence 54
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=97.76 E-value=3.5e-05 Score=56.93 Aligned_cols=77 Identities=14% Similarity=0.069 Sum_probs=50.9
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC----CCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
.|+|.|.|| |.+|..++..|+++|++|.+.+|++++.+.+.+... ...............++++ .+.+.|++|.
T Consensus 1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e-~~~~aD~iii 78 (184)
T d1bg6a2 1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGL-AVKDADVILI 78 (184)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHH-HHTTCSEEEE
T ss_pred CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHh-HhcCCCEEEE
Confidence 379999995 999999999999999999999999988877643211 1111111111111122333 3567899887
Q ss_pred ccC
Q 028043 158 CTG 160 (214)
Q Consensus 158 ~Ag 160 (214)
+..
T Consensus 79 ~v~ 81 (184)
T d1bg6a2 79 VVP 81 (184)
T ss_dssp CSC
T ss_pred EEc
Confidence 653
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=97.75 E-value=1.8e-05 Score=55.76 Aligned_cols=70 Identities=20% Similarity=0.258 Sum_probs=57.7
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEecc
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~A 159 (214)
|.++|.| .|.+|+.++++| +|.+|++++.+++..+... ..++.++.+|.+|++.++++-+...+.+|-+.
T Consensus 1 kHivI~G-~g~~g~~l~~~L--~~~~i~vi~~d~~~~~~~~----~~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~~ 70 (129)
T d2fy8a1 1 RHVVICG-WSESTLECLREL--RGSEVFVLAEDENVRKKVL----RSGANFVHGDPTRVSDLEKANVRGARAVIVNL 70 (129)
T ss_dssp CCEEEES-CCHHHHHHHHTS--CGGGEEEEESCTTHHHHHH----HTTCEEEESCTTSHHHHHHTTCTTCSEEEECC
T ss_pred CEEEEEC-CCHHHHHHHHHH--cCCCCEEEEcchHHHHHHH----hcCccccccccCCHHHHHHhhhhcCcEEEEec
Confidence 5689998 588999999998 4677888999988877654 34678899999999999986677899988655
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=97.74 E-value=0.00016 Score=51.74 Aligned_cols=106 Identities=18% Similarity=0.199 Sum_probs=66.6
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCC--eEEEEEcChhHHHHHhcccC-----CCCEEEEEecCCChhccchhhhCCCcEE
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQD-----EETLQVCKGDTRNPKDLDPAIFEGVTHV 155 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~~~v~~Di~d~~~v~~~~~~~~d~l 155 (214)
|+|.|.|| |.+|..++..++.+|. +++++|+++++++.....+. ......... |.++ +.+.|++
T Consensus 1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~---~~~~-----~~~adiv 71 (140)
T d1a5za1 1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAG---DYAD-----LKGSDVV 71 (140)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEEC---CGGG-----GTTCSEE
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCC---cHHH-----hcCCCEE
Confidence 57888996 9999999999988774 79999999876543221111 112222222 2222 4578999
Q ss_pred EeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CCCeEEEE
Q 028043 156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLV 200 (214)
Q Consensus 156 i~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~~~iV~v 200 (214)
|..||....+. +.-.+....|..-...+++.+.+ ...-++.+
T Consensus 72 vitag~~~~~g---~~r~dl~~~N~~I~~~i~~~i~~~~p~aiviv 114 (140)
T d1a5za1 72 IVAAGVPQKPG---ETRLQLLGRNARVMKEIARNVSKYAPDSIVIV 114 (140)
T ss_dssp EECCCCCCCSS---CCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred EEecccccCCC---cchhhhhccccchHHHHHHHHHhcCCCcEEEE
Confidence 99999765322 22234567787777778887743 33334443
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=97.73 E-value=3e-05 Score=60.09 Aligned_cols=78 Identities=13% Similarity=0.233 Sum_probs=55.9
Q ss_pred CCCCCCEEEEEcC----------------chHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCCh
Q 028043 78 PASSSKLVLVAGG----------------SGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP 141 (214)
Q Consensus 78 ~~~~~k~vlITGa----------------sggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~ 141 (214)
.++.||+||||+| ||..|.+||+++..+|++|+++.-..... ....+..+. +...
T Consensus 2 ~dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~-------~p~~~~~~~--~~t~ 72 (223)
T d1u7za_ 2 NDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLP-------TPPFVKRVD--VMTA 72 (223)
T ss_dssp CTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCC-------CCTTEEEEE--CCSH
T ss_pred cccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccC-------cccccccce--ehhh
Confidence 4578999999975 59999999999999999999987644210 023444443 4444
Q ss_pred hccchhh---hCCCcEEEeccCCCCC
Q 028043 142 KDLDPAI---FEGVTHVICCTGTTAF 164 (214)
Q Consensus 142 ~~v~~~~---~~~~d~li~~Ag~~~~ 164 (214)
+++..++ +...|++|++|++..+
T Consensus 73 ~~m~~~~~~~~~~~D~~i~aAAvsDf 98 (223)
T d1u7za_ 73 LEMEAAVNASVQQQNIFIGCAAVADY 98 (223)
T ss_dssp HHHHHHHHHHGGGCSEEEECCBCCSE
T ss_pred HHHHHHHHhhhccceeEeeeechhhh
Confidence 4444433 5689999999999875
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=97.69 E-value=0.00028 Score=50.57 Aligned_cols=107 Identities=17% Similarity=0.145 Sum_probs=67.6
Q ss_pred EEEEEcCchHHHHHHHHHHHHCCC--eEEEEEcC--hhHHH----HHhcccC-CCCEEEEEecCCChhccchhhhCCCcE
Q 028043 84 LVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRD--PEKAT----TLFGKQD-EETLQVCKGDTRNPKDLDPAIFEGVTH 154 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~G~--~V~~~~r~--~~~~~----~~~~~~~-~~~~~~v~~Di~d~~~v~~~~~~~~d~ 154 (214)
+|.|+||+|.+|..++..++.+|. ++++++.+ ++..+ ++.+... .....+...| .++ +.+.|+
T Consensus 2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~---~~~-----~~~aDi 73 (142)
T d1o6za1 2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGG---YED-----TAGSDV 73 (142)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECC---GGG-----GTTCSE
T ss_pred eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCC---HHH-----hhhcCE
Confidence 699999999999999999999886 68888854 33322 1221111 2233333332 222 357899
Q ss_pred EEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CCC-eEEEEc
Q 028043 155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLK-RIVLVS 201 (214)
Q Consensus 155 li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~~-~iV~vS 201 (214)
+|..||....+. ++-.+.++.|..-...+.+.+++ ..+ .++.+|
T Consensus 74 VvitaG~~~~~g---~~R~dl~~~N~~I~~~i~~~i~~~~p~~i~ivvt 119 (142)
T d1o6za1 74 VVITAGIPRQPG---QTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTS 119 (142)
T ss_dssp EEECCCCCCCTT---CCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECC
T ss_pred EEEecccccccC---CchhhHHHHHHHHHHHHHHHHHhcCCCceEEEec
Confidence 999999754322 22244667888888888888743 333 444443
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=97.67 E-value=7e-05 Score=55.65 Aligned_cols=75 Identities=19% Similarity=0.240 Sum_probs=52.3
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChh--ccchhh---h--CCC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK--DLDPAI---F--EGV 152 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~--~v~~~~---~--~~~ 152 (214)
.|.+|+|+|| |+||...++.+...|+ +|+++++++++.+...+ +. .. . ..|..+.+ +..+.+ . .++
T Consensus 28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~-lG-a~-~--vi~~~~~~~~~~~~~i~~~~~~~g~ 101 (182)
T d1vj0a2 28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE-IG-AD-L--TLNRRETSVEERRKAIMDITHGRGA 101 (182)
T ss_dssp BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHH-TT-CS-E--EEETTTSCHHHHHHHHHHHTTTSCE
T ss_pred CCCEEEEECC-Cccchhheeccccccccccccccccccccccccc-cc-ce-E--EEeccccchHHHHHHHHHhhCCCCc
Confidence 5789999996 8999999999999998 79999999998876543 22 11 1 23444322 111111 1 269
Q ss_pred cEEEeccCC
Q 028043 153 THVICCTGT 161 (214)
Q Consensus 153 d~li~~Ag~ 161 (214)
|++|.+.|.
T Consensus 102 Dvvid~vG~ 110 (182)
T d1vj0a2 102 DFILEATGD 110 (182)
T ss_dssp EEEEECSSC
T ss_pred eEEeecCCc
Confidence 999999985
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=97.66 E-value=3.8e-05 Score=55.39 Aligned_cols=107 Identities=15% Similarity=0.166 Sum_probs=67.1
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCC--eEEEEEcChhHHHHHhcccC-----CCCEEEEEecCCChhccchhhhCCCcEE
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQD-----EETLQVCKGDTRNPKDLDPAIFEGVTHV 155 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~~~v~~Di~d~~~v~~~~~~~~d~l 155 (214)
.+|.|.|+ |.+|..++..|+.+|. +++++++++++++.....+. ......... .+. ++ +.+.|++
T Consensus 2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~--~~~---~~--~~daDvV 73 (143)
T d1llda1 2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDP---EI--CRDADMV 73 (143)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCG---GG--GTTCSEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecC--CCH---HH--hhCCcEE
Confidence 36888896 9999999999999886 79999999876543211111 111222211 122 21 3568999
Q ss_pred EeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CCCeEEEE
Q 028043 156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLV 200 (214)
Q Consensus 156 i~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~~~iV~v 200 (214)
|..||....+. +.-.+.+..|..-...+++.+++ ..+.++.+
T Consensus 74 VitaG~~~~~g---~~R~dl~~~N~~i~~~i~~~i~~~~p~ai~iv 116 (143)
T d1llda1 74 VITAGPRQKPG---QSRLELVGATVNILKAIMPNLVKVAPNAIYML 116 (143)
T ss_dssp EECCCCCCCTT---CCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred EEecccccCCC---CchhhhhhhhHHHHHHHHHHHHhhCCCeEEEE
Confidence 99999765322 22234567788888888877743 44434433
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.64 E-value=2.5e-05 Score=58.61 Aligned_cols=76 Identities=17% Similarity=0.086 Sum_probs=52.1
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCe-EEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccc---hhhhCCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLD---PAIFEGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~---~~~~~~~d~li 156 (214)
.+++|||+||+|++|...++.....|++ |+.+++++++..++..++.. . ...|..+++..+ +..-+++|+++
T Consensus 30 ~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~ga-d---~vi~~~~~~~~~~~~~~~~~GvDvv~ 105 (187)
T d1vj1a2 30 SNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGF-D---AAVNYKTGNVAEQLREACPGGVDVYF 105 (187)
T ss_dssp SCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCC-S---EEEETTSSCHHHHHHHHCTTCEEEEE
T ss_pred CCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccc-e---EEeeccchhHHHHHHHHhccCceEEE
Confidence 3479999999999999999998889986 55567777776666544432 1 234555443322 21123699999
Q ss_pred eccC
Q 028043 157 CCTG 160 (214)
Q Consensus 157 ~~Ag 160 (214)
.+.|
T Consensus 106 D~vG 109 (187)
T d1vj1a2 106 DNVG 109 (187)
T ss_dssp ESSC
T ss_pred ecCC
Confidence 9887
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=97.64 E-value=2.2e-05 Score=57.12 Aligned_cols=37 Identities=27% Similarity=0.352 Sum_probs=33.4
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHH
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKAT 120 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~ 120 (214)
|+|+|.|+ |.||..++..|++.|++|.+++|+++..+
T Consensus 1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~ 37 (167)
T d1ks9a2 1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYC 37 (167)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEE
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHhh
Confidence 68999997 99999999999999999999999876543
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=97.63 E-value=4e-05 Score=55.18 Aligned_cols=108 Identities=16% Similarity=0.110 Sum_probs=64.6
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccC------CCCEEEEEecCCChhccchhhhCCCcEE
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQD------EETLQVCKGDTRNPKDLDPAIFEGVTHV 155 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~------~~~~~~v~~Di~d~~~v~~~~~~~~d~l 155 (214)
++|.|.|+ |.+|..++..|+.++. ++++++.+++..+.....+. .....+... .|. +. +.+.|++
T Consensus 2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~--~d~---~~--~~~advv 73 (142)
T d1uxja1 2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NNY---AD--TANSDVI 73 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCG---GG--GTTCSEE
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEec--CcH---HH--hcCCCEE
Confidence 58899996 9999999999988775 89999988766443221111 111111111 122 22 3568999
Q ss_pred EeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CCCeEEEEc
Q 028043 156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVS 201 (214)
Q Consensus 156 i~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~~~iV~vS 201 (214)
|-.||....+.+ ...+.+..|..-...+++.+.+ ..+-++.+-
T Consensus 74 vitag~~~~~~~---~r~dl~~~N~~i~~~i~~~i~k~~p~aivivv 117 (142)
T d1uxja1 74 VVTSGAPRKPGM---SREDLIKVNADITRACISQAAPLSPNAVIIMV 117 (142)
T ss_dssp EECCSCC------------CHHHHHHHHHHHHHHHGGGCTTCEEEEC
T ss_pred EEeeeccCCcCc---chhHHHhHHHHHHHHHHHHHhccCCCceEEEe
Confidence 999997653322 2334568888888888888743 444444443
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=97.62 E-value=0.00014 Score=52.26 Aligned_cols=107 Identities=16% Similarity=0.123 Sum_probs=63.1
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCC--eEEEEEcChhHHHHHhcccC-----CCCEEEEEecCCChhccchhhhCCCcEE
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQD-----EETLQVCKGDTRNPKDLDPAIFEGVTHV 155 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~~~v~~Di~d~~~v~~~~~~~~d~l 155 (214)
++|.|.|+ |.+|..++..++.+|. ++++++++++.++.....+. ........+ +.+ .+.+.|++
T Consensus 2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~---~~~-----~~~~adiv 72 (142)
T d1y6ja1 2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG---DYS-----DVKDCDVI 72 (142)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CGG-----GGTTCSEE
T ss_pred CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeC---cHH-----HhCCCceE
Confidence 46888896 9999999999999876 79999998876433222221 112221111 222 24678999
Q ss_pred EeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CCC-eEEEEc
Q 028043 156 ICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLK-RIVLVS 201 (214)
Q Consensus 156 i~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~~-~iV~vS 201 (214)
|..||....+. +.-.+....|..-...+++.+++ ..+ .++.+|
T Consensus 73 vitag~~~~~~---~~r~~l~~~N~~i~~~i~~~i~~~~p~ai~ivvt 117 (142)
T d1y6ja1 73 VVTAGANRKPG---ETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVS 117 (142)
T ss_dssp EECCCC---------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECS
T ss_pred EEecccccCcC---cchhHHhhHHHHHHHHHHHHhhccCCCceEEEec
Confidence 99999764222 23344567788888888887743 333 344444
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=97.61 E-value=0.0008 Score=48.51 Aligned_cols=111 Identities=13% Similarity=0.140 Sum_probs=68.8
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccC------CCCEEEEEecCCChhccchhhhCCCcEE
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQD------EETLQVCKGDTRNPKDLDPAIFEGVTHV 155 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~------~~~~~~v~~Di~d~~~v~~~~~~~~d~l 155 (214)
.+|.|.|+ |.+|+.++..|+..+. +++++++++++.+.....+. .....+...| +.+ .+.+.|++
T Consensus 4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~~-----~~~~advv 75 (150)
T d1t2da1 4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TYD-----DLAGADVV 75 (150)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CGG-----GGTTCSEE
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--ccc-----ccCCCcEE
Confidence 57999995 9999999988888775 69999998766543222111 1222222211 222 24578999
Q ss_pred EeccCCCCCCCCCC--CCCCchhHHHHHHHHHHHHHhcc-CCCe-EEEEc
Q 028043 156 ICCTGTTAFPSRRW--DGDNTPEKVDWEGVRNLVSALPS-SLKR-IVLVS 201 (214)
Q Consensus 156 i~~Ag~~~~~~~~~--~~~~~~~~vNv~g~~~l~~a~~~-~~~~-iV~vS 201 (214)
|..||....+..+. ..-...+..|..-...+++.+++ ...- ++++|
T Consensus 76 vitag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~p~aivivvt 125 (150)
T d1t2da1 76 IVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVT 125 (150)
T ss_dssp EECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred EEecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence 99999876443221 12234567788888888887743 3344 44443
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=97.59 E-value=7.6e-05 Score=54.75 Aligned_cols=76 Identities=20% Similarity=0.147 Sum_probs=53.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccch---hhh-CCCcEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDP---AIF-EGVTHV 155 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~---~~~-~~~d~l 155 (214)
.+.+|+|.|++|++|...++.+...|. +|+++++++++.+.+.+ + +.. .. .|.++.+..++ ... +++|++
T Consensus 27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~-~-Ga~-~~--i~~~~~~~~~~~~~~~~~~~~d~v 101 (170)
T d1jvba2 27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR-A-GAD-YV--INASMQDPLAEIRRITESKGVDAV 101 (170)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH-H-TCS-EE--EETTTSCHHHHHHHHTTTSCEEEE
T ss_pred CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHH-c-CCc-ee--eccCCcCHHHHHHHHhhcccchhh
Confidence 467999999999999999999988885 79999999988776543 2 111 22 33444333232 112 358999
Q ss_pred EeccCC
Q 028043 156 ICCTGT 161 (214)
Q Consensus 156 i~~Ag~ 161 (214)
|.++|.
T Consensus 102 id~~g~ 107 (170)
T d1jvba2 102 IDLNNS 107 (170)
T ss_dssp EESCCC
T ss_pred hccccc
Confidence 999885
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.58 E-value=0.00034 Score=50.06 Aligned_cols=109 Identities=12% Similarity=0.107 Sum_probs=67.5
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCC--eEEEEEcChhHHHHHhcccC------CCCEEEEEecCCChhccchhhhCCCcE
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFGKQD------EETLQVCKGDTRNPKDLDPAIFEGVTH 154 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~------~~~~~~v~~Di~d~~~v~~~~~~~~d~ 154 (214)
|+|.|.|+ |.+|..++..|+.+|. +++++++++++.+.....+. ......... .|.+ .+.+.|+
T Consensus 1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~--~d~~-----~~~~adi 72 (142)
T d1ojua1 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYS-----LLKGSEI 72 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGG-----GGTTCSE
T ss_pred CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccC--CCHH-----HhccccE
Confidence 57889996 9999999999998775 69999999877543211110 111122211 1222 2467899
Q ss_pred EEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-CCCeEEEEcc
Q 028043 155 VICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSALPS-SLKRIVLVSS 202 (214)
Q Consensus 155 li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~~~-~~~~iV~vSS 202 (214)
+|..||....+. +.-.+....|..-...+++.+++ ...-++.+-|
T Consensus 73 Vvitag~~~~~g---~~r~~l~~~n~~i~~~i~~~i~~~~p~aivivvt 118 (142)
T d1ojua1 73 IVVTAGLARKPG---MTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT 118 (142)
T ss_dssp EEECCCCCCCSS---CCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred EEEeccccCCCC---CchHHHHHHhhHHHHHHHHHHHhhCCCcEEEEec
Confidence 999999765332 12234556788777888887743 4344444433
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=97.56 E-value=9.5e-05 Score=54.45 Aligned_cols=68 Identities=19% Similarity=0.256 Sum_probs=50.6
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEecc
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~A 159 (214)
++|+|+|.|+ ||.|++++..|.+.|. +|.++.|+.++.+.+.+.+.. .. .+ ... ..+.|+|||+.
T Consensus 16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~---~~--~~-----~~~---~~~~DliINaT 81 (167)
T d1npya1 16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGY---AY--IN-----SLE---NQQADILVNVT 81 (167)
T ss_dssp TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTC---EE--ES-----CCT---TCCCSEEEECS
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhh---hh--hh-----ccc---ccchhhheecc
Confidence 4578999995 9999999999999997 699999999998887655431 11 11 111 23679999986
Q ss_pred CCC
Q 028043 160 GTT 162 (214)
Q Consensus 160 g~~ 162 (214)
...
T Consensus 82 piG 84 (167)
T d1npya1 82 SIG 84 (167)
T ss_dssp STT
T ss_pred ccC
Confidence 654
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=97.55 E-value=4.2e-05 Score=55.21 Aligned_cols=43 Identities=21% Similarity=0.279 Sum_probs=37.5
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHH
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKAT 120 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~ 120 (214)
++..+|+|.|.||.|.+|+.+++.|.+.|++|.+.+|+.....
T Consensus 5 ~~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~ 47 (152)
T d2pv7a2 5 INSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVA 47 (152)
T ss_dssp SCTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGH
T ss_pred cCCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEeccccccccc
Confidence 3446789999999999999999999999999999999875543
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.54 E-value=0.00049 Score=49.79 Aligned_cols=100 Identities=15% Similarity=0.065 Sum_probs=61.7
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCC-------eEEEEEcCh--hHHHHHhccc---CCCCEEEEEecCCChhccchhhhC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNI-------KSRLLLRDP--EKATTLFGKQ---DEETLQVCKGDTRNPKDLDPAIFE 150 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~-------~V~~~~r~~--~~~~~~~~~~---~~~~~~~v~~Di~d~~~v~~~~~~ 150 (214)
++|.|+||+|.+|++++..|+..+. .+++.+.+. +.++.+.-++ .......+.. .+. ... .+.
T Consensus 4 ~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~--~~~-~~~ 78 (154)
T d5mdha1 4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIA--TDK--EEI-AFK 78 (154)
T ss_dssp EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEE--ESC--HHH-HTT
T ss_pred eEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhccccccccccccc--Ccc--ccc-ccC
Confidence 5899999999999999999986542 355555543 3333322111 1122222222 111 112 356
Q ss_pred CCcEEEeccCCCCCCCCCCCCCCchhHHHHHHHHHHHHHh
Q 028043 151 GVTHVICCTGTTAFPSRRWDGDNTPEKVDWEGVRNLVSAL 190 (214)
Q Consensus 151 ~~d~li~~Ag~~~~~~~~~~~~~~~~~vNv~g~~~l~~a~ 190 (214)
+.|++|-.||....+. +.-.+.+..|..-...+.+.+
T Consensus 79 ~~dvVVitag~~~~~g---~sr~dll~~N~~i~k~~~~~i 115 (154)
T d5mdha1 79 DLDVAILVGSMPRRDG---MERKDLLKANVKIFKCQGAAL 115 (154)
T ss_dssp TCSEEEECCSCCCCTT---CCTTTTHHHHHHHHHHHHHHH
T ss_pred CceEEEEecccCCCCC---CchhHHHHHhHHHHHHHHHHH
Confidence 8999999999865332 233446788988888888877
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.49 E-value=0.00037 Score=51.01 Aligned_cols=77 Identities=16% Similarity=0.205 Sum_probs=53.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh---h-CCCcEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI---F-EGVTHV 155 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~---~-~~~d~l 155 (214)
.+.+|+|.|+ |+||...++.+...|+ +|+++++++++++..++ +. .. .++..+-.+.....+.+ . .++|++
T Consensus 26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~-~G-a~-~~~~~~~~~~~~~~~~~~~~~g~g~Dvv 101 (171)
T d1pl8a2 26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE-IG-AD-LVLQISKESPQEIARKVEGQLGCKPEVT 101 (171)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH-TT-CS-EEEECSSCCHHHHHHHHHHHHTSCCSEE
T ss_pred CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHHH-hC-Cc-ccccccccccccccccccccCCCCceEE
Confidence 4568999986 9999999999999999 69999999998876543 22 11 22223333333333211 2 368999
Q ss_pred EeccCC
Q 028043 156 ICCTGT 161 (214)
Q Consensus 156 i~~Ag~ 161 (214)
|.+.|.
T Consensus 102 id~~G~ 107 (171)
T d1pl8a2 102 IECTGA 107 (171)
T ss_dssp EECSCC
T ss_pred EeccCC
Confidence 999984
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=97.47 E-value=0.00022 Score=51.91 Aligned_cols=41 Identities=17% Similarity=0.110 Sum_probs=35.8
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhc
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFG 124 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~ 124 (214)
|+|.|.| .|.+|..+++.|.+.|++|++.+|+++..++..+
T Consensus 1 MkI~iIG-~G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~ 41 (165)
T d2f1ka2 1 MKIGVVG-LGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVE 41 (165)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred CEEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCchHHHHHHH
Confidence 5688887 5999999999999999999999999988776543
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=97.45 E-value=0.00019 Score=52.89 Aligned_cols=76 Identities=16% Similarity=0.097 Sum_probs=51.4
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhc-cch---hh-hCCCcE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKD-LDP---AI-FEGVTH 154 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~-v~~---~~-~~~~d~ 154 (214)
.|.+|+|.|+ ||+|...+..+...|+ +|+++++++++.+...+.. ... ..|..+.++ +.+ .. -+++|+
T Consensus 28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~G----a~~-~i~~~~~~~~~~~~~~~~~~~G~D~ 101 (176)
T d2jhfa2 28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVG----ATE-CVNPQDYKKPIQEVLTEMSNGGVDF 101 (176)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTT----CSE-EECGGGCSSCHHHHHHHHTTSCBSE
T ss_pred CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhC----Cee-EEecCCchhHHHHHHHHHhcCCCCE
Confidence 5689999998 7799999999999885 7999999999877654321 111 122322222 221 11 247999
Q ss_pred EEeccCCC
Q 028043 155 VICCTGTT 162 (214)
Q Consensus 155 li~~Ag~~ 162 (214)
+|-+.|..
T Consensus 102 vid~~G~~ 109 (176)
T d2jhfa2 102 SFEVIGRL 109 (176)
T ss_dssp EEECSCCH
T ss_pred EEecCCch
Confidence 99999853
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=97.43 E-value=0.00011 Score=54.31 Aligned_cols=75 Identities=23% Similarity=0.149 Sum_probs=51.4
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccch--hhh--CCCcEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDP--AIF--EGVTHV 155 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~--~~~--~~~d~l 155 (214)
.|.+|+|.|+ |+||...++.+...|+ +|+++++++++.+...+ +. .. + ..|..+.+..++ ... .++|++
T Consensus 27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~-lG-a~-~--~i~~~~~~~~~~v~~~t~g~G~D~v 100 (174)
T d1jqba2 27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKF-YG-AT-D--ILNYKNGHIEDQVMKLTNGKGVDRV 100 (174)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHH-HT-CS-E--EECGGGSCHHHHHHHHTTTSCEEEE
T ss_pred CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHHh-hC-cc-c--cccccchhHHHHHHHHhhccCcceE
Confidence 4678999986 9999999999888998 69999999988766543 22 11 1 234444322222 112 259999
Q ss_pred EeccCC
Q 028043 156 ICCTGT 161 (214)
Q Consensus 156 i~~Ag~ 161 (214)
|.++|.
T Consensus 101 id~~g~ 106 (174)
T d1jqba2 101 IMAGGG 106 (174)
T ss_dssp EECSSC
T ss_pred EEccCC
Confidence 999985
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=97.40 E-value=0.00014 Score=53.82 Aligned_cols=75 Identities=16% Similarity=0.147 Sum_probs=51.6
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhcc-ch---hh-hCCCcE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDL-DP---AI-FEGVTH 154 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v-~~---~~-~~~~d~ 154 (214)
.|.+|+|.|+ |++|...++.+...|+ +|+++++++++++...+ +. .. .+ .|..+.+.. .+ .. -++.|+
T Consensus 27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~-lG-a~-~~--i~~~~~d~~~~~~~~~~~~~G~d~ 100 (174)
T d1p0fa2 27 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE-LG-AT-EC--LNPKDYDKPIYEVICEKTNGGVDY 100 (174)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH-TT-CS-EE--ECGGGCSSCHHHHHHHHTTSCBSE
T ss_pred CCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHH-cC-Cc-EE--EcCCCchhHHHHHHHHhcCCCCcE
Confidence 5689999995 9999999999999997 68889999998876543 22 11 11 344333321 11 11 137999
Q ss_pred EEeccCC
Q 028043 155 VICCTGT 161 (214)
Q Consensus 155 li~~Ag~ 161 (214)
+|-+.|.
T Consensus 101 vid~~g~ 107 (174)
T d1p0fa2 101 AVECAGR 107 (174)
T ss_dssp EEECSCC
T ss_pred EEEcCCC
Confidence 9999884
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Probab=97.38 E-value=0.00041 Score=52.58 Aligned_cols=71 Identities=14% Similarity=0.083 Sum_probs=51.2
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
.+++||+|+|.| -|.+|+++++.|.+.|++|++.+.+.+........ +.+. -+.+ +.+..++|+++-
T Consensus 23 ~~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~~~----g~~~-----~~~~---~~~~~~~DI~iP 89 (201)
T d1c1da1 23 GSLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHAVAL----GHTA-----VALE---DVLSTPCDVFAP 89 (201)
T ss_dssp CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT----TCEE-----CCGG---GGGGCCCSEEEE
T ss_pred CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHHHhh----cccc-----cCcc---ccccccceeeec
Confidence 357899999998 89999999999999999999999998877664321 1221 1222 222236888887
Q ss_pred ccCC
Q 028043 158 CTGT 161 (214)
Q Consensus 158 ~Ag~ 161 (214)
||..
T Consensus 90 cA~~ 93 (201)
T d1c1da1 90 CAMG 93 (201)
T ss_dssp CSCS
T ss_pred cccc
Confidence 7753
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.36 E-value=0.00031 Score=51.07 Aligned_cols=43 Identities=19% Similarity=0.224 Sum_probs=37.2
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhc
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFG 124 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~ 124 (214)
.+.+|+|.|+ |+||...++.+...|++|+++++++++++...+
T Consensus 27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~~ 69 (166)
T d1llua2 27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELARK 69 (166)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhhc
Confidence 4679999886 999999999888899999999999998876543
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=97.36 E-value=9.3e-05 Score=54.94 Aligned_cols=76 Identities=16% Similarity=0.079 Sum_probs=52.8
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccch----hh-hCCCcE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDP----AI-FEGVTH 154 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~----~~-~~~~d~ 154 (214)
.+.+|+|.|+ |++|...++.+...|+ +|+++++++++++..++. . ... ..|..+.+...+ .. -+++|+
T Consensus 29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~-G-A~~---~in~~~~~~~~~~~~~~~~g~G~d~ 102 (176)
T d1d1ta2 29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAV-G-ATE---CISPKDSTKPISEVLSEMTGNNVGY 102 (176)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHH-T-CSE---EECGGGCSSCHHHHHHHHHTSCCCE
T ss_pred CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhc-C-CcE---EECccccchHHHHHHHHhccccceE
Confidence 5679999985 9999999999999995 799999999998765432 2 111 123333332221 11 247999
Q ss_pred EEeccCCC
Q 028043 155 VICCTGTT 162 (214)
Q Consensus 155 li~~Ag~~ 162 (214)
+|.+.|..
T Consensus 103 vi~~~g~~ 110 (176)
T d1d1ta2 103 TFEVIGHL 110 (176)
T ss_dssp EEECSCCH
T ss_pred EEEeCCch
Confidence 99999853
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=97.33 E-value=0.0008 Score=45.87 Aligned_cols=73 Identities=16% Similarity=0.151 Sum_probs=51.5
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhH-HHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEE
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK-ATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVI 156 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li 156 (214)
.++++|+|+|.| +|.+|.+-++.|++.|++|++++..... ...+. ...++.++..+..+ + .+.+.+.++
T Consensus 8 l~l~~k~vlVvG-~G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~---~~~~i~~~~~~~~~-~-----dl~~~~lv~ 77 (113)
T d1pjqa1 8 CQLRDRDCLIVG-GGDVAERKARLLLEAGARLTVNALTFIPQFTVWA---NEGMLTLVEGPFDE-T-----LLDSCWLAI 77 (113)
T ss_dssp ECCBTCEEEEEC-CSHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHH---TTTSCEEEESSCCG-G-----GGTTCSEEE
T ss_pred EEeCCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEeccCChHHHHHH---hcCCceeeccCCCH-H-----HhCCCcEEe
Confidence 457899999999 6789999999999999999998876543 22222 23456666655543 2 244678877
Q ss_pred eccC
Q 028043 157 CCTG 160 (214)
Q Consensus 157 ~~Ag 160 (214)
.+.+
T Consensus 78 ~at~ 81 (113)
T d1pjqa1 78 AATD 81 (113)
T ss_dssp ECCS
T ss_pred ecCC
Confidence 6543
|
| >d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.32 E-value=4.1e-05 Score=56.90 Aligned_cols=77 Identities=23% Similarity=0.239 Sum_probs=51.8
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC---CCC-EEEEEecCCChhccchhhhCCCcE
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EET-LQVCKGDTRNPKDLDPAIFEGVTH 154 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~-~~~v~~Di~d~~~v~~~~~~~~d~ 154 (214)
..++|+|+|.| +||.+++++..|.+.| +|.+..|+.++.+++.+.+. ... ... .++ +++.. .....|+
T Consensus 15 ~~~~k~vlIlG-aGG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~~~~~~~~~--~~~---~~~~~-~~~~~dl 86 (177)
T d1nvta1 15 RVKDKNIVIYG-AGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEE--VKF---SGLDV-DLDGVDI 86 (177)
T ss_dssp CCCSCEEEEEC-CSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHH--EEE---ECTTC-CCTTCCE
T ss_pred CcCCCEEEEEC-CcHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHhhchhhhhh--hhh---hhhhh-ccchhhh
Confidence 35789999999 6889999999998777 99999999999887654332 111 000 111 12221 1346899
Q ss_pred EEeccCCCC
Q 028043 155 VICCTGTTA 163 (214)
Q Consensus 155 li~~Ag~~~ 163 (214)
+||+-....
T Consensus 87 iIn~tp~g~ 95 (177)
T d1nvta1 87 IINATPIGM 95 (177)
T ss_dssp EEECSCTTC
T ss_pred hccCCcccc
Confidence 999876543
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=97.23 E-value=0.00017 Score=53.44 Aligned_cols=75 Identities=19% Similarity=0.173 Sum_probs=50.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChh-ccch---hh-hCCCcE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPK-DLDP---AI-FEGVTH 154 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~-~v~~---~~-~~~~d~ 154 (214)
.|.+|+|.| .|+||...++.+...|+ +|+++++++++++..++ +.. . .+ .|..+.+ .++. .. -+++|+
T Consensus 28 ~G~~VlV~G-~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~-~Ga-~-~~--i~~~~~~~~~~~~~~~~~~~G~d~ 101 (174)
T d1e3ia2 28 PGSTCAVFG-LGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA-LGA-T-DC--LNPRELDKPVQDVITELTAGGVDY 101 (174)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-TTC-S-EE--ECGGGCSSCHHHHHHHHHTSCBSE
T ss_pred CCCEEEEEC-CChHHHHHHHHHHHhCCceeeeeccchHHHHHHHH-hCC-C-cc--cCCccchhhhhhhHhhhhcCCCcE
Confidence 567999998 59999999999999998 57788998888765433 321 1 11 2322222 1221 11 247999
Q ss_pred EEeccCC
Q 028043 155 VICCTGT 161 (214)
Q Consensus 155 li~~Ag~ 161 (214)
+|.++|.
T Consensus 102 vie~~G~ 108 (174)
T d1e3ia2 102 SLDCAGT 108 (174)
T ss_dssp EEESSCC
T ss_pred EEEeccc
Confidence 9999985
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=97.18 E-value=0.00042 Score=50.96 Aligned_cols=75 Identities=13% Similarity=0.101 Sum_probs=50.9
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCe-EEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccch--hhh-CCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDP--AIF-EGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~--~~~-~~~d~li 156 (214)
.+.+|+|.|+ |+||...++.+...|++ |+++++++++++..++ +.. .++ .|..+++..++ .+. +++|++|
T Consensus 28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~-~Ga--~~~--i~~~~~~~~~~i~~~t~gg~D~vi 101 (174)
T d1f8fa2 28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQ-LGA--THV--INSKTQDPVAAIKEITDGGVNFAL 101 (174)
T ss_dssp TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHH-HTC--SEE--EETTTSCHHHHHHHHTTSCEEEEE
T ss_pred CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHHH-cCC--eEE--EeCCCcCHHHHHHHHcCCCCcEEE
Confidence 4678999997 99999999998888886 4566788887776543 321 122 35555433332 112 4699999
Q ss_pred eccCC
Q 028043 157 CCTGT 161 (214)
Q Consensus 157 ~~Ag~ 161 (214)
.+.|.
T Consensus 102 d~~G~ 106 (174)
T d1f8fa2 102 ESTGS 106 (174)
T ss_dssp ECSCC
T ss_pred EcCCc
Confidence 99984
|
| >d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Leucine dehydrogenase species: Bacillus sphaericus [TaxId: 1421]
Probab=97.15 E-value=0.0008 Score=51.98 Aligned_cols=73 Identities=12% Similarity=0.086 Sum_probs=54.0
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
.+++||+|+|-| -|.+|+++++.|.+.|++|++.+.+....+....... .. ..+.+++- ..++|+++-
T Consensus 35 ~~l~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g---~~-----~~~~~~~~---~~~cDIl~P 102 (230)
T d1leha1 35 DSLEGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEG---AD-----AVAPNAIY---GVTCDIFAP 102 (230)
T ss_dssp CCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC---CE-----ECCGGGTT---TCCCSEEEE
T ss_pred CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcC---Cc-----ccCCcccc---cccccEecc
Confidence 347899999999 8999999999999999999999999888776654332 11 12333222 236888888
Q ss_pred ccCCC
Q 028043 158 CTGTT 162 (214)
Q Consensus 158 ~Ag~~ 162 (214)
||.-.
T Consensus 103 cA~~~ 107 (230)
T d1leha1 103 CALGA 107 (230)
T ss_dssp CSCSC
T ss_pred ccccc
Confidence 88643
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=97.15 E-value=0.00066 Score=49.67 Aligned_cols=75 Identities=23% Similarity=0.197 Sum_probs=49.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCC--hhccchhhh-CCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRN--PKDLDPAIF-EGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d--~~~v~~~~~-~~~d~li 156 (214)
.+.+|+|.|+ |++|...++.+...|+ +|+++++++++++.+.+.. . .+++ |..+ .+.+.+..- .++|++|
T Consensus 32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~g-a--~~~i--~~~~~~~~~~~~~~~~~g~d~vi 105 (172)
T d1h2ba2 32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLG-A--DHVV--DARRDPVKQVMELTRGRGVNVAM 105 (172)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTT-C--SEEE--ETTSCHHHHHHHHTTTCCEEEEE
T ss_pred CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcc-c--ceee--cCcccHHHHHHHhhCCCCceEEE
Confidence 3678999985 9999999998888886 5777889988877655421 1 1222 3332 122222111 2699999
Q ss_pred eccCC
Q 028043 157 CCTGT 161 (214)
Q Consensus 157 ~~Ag~ 161 (214)
.++|.
T Consensus 106 d~~g~ 110 (172)
T d1h2ba2 106 DFVGS 110 (172)
T ss_dssp ESSCC
T ss_pred EecCc
Confidence 99985
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.09 E-value=0.00047 Score=51.77 Aligned_cols=40 Identities=20% Similarity=0.176 Sum_probs=35.7
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHH
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATT 121 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~ 121 (214)
+-|+|.|.|| |-+|+.+|..++..|++|++.+++++.++.
T Consensus 3 ~IkkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~ 42 (192)
T d1f0ya2 3 IVKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAK 42 (192)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred eeEEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHH
Confidence 3489999996 999999999999999999999999876654
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=97.06 E-value=0.0003 Score=46.45 Aligned_cols=74 Identities=19% Similarity=0.251 Sum_probs=50.2
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
++++|+|+|.|. |.-|.++++.|.++|++|++.+.+...... +.+ ........... +.+ .+.++|.+|..
T Consensus 2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~~--~~~-~~~~~~~~~~~-~~~-----~~~~~d~vi~S 71 (93)
T d2jfga1 2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPGL--DKL-PEAVERHTGSL-NDE-----WLMAADLIVAS 71 (93)
T ss_dssp CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTTG--GGS-CTTSCEEESBC-CHH-----HHHHCSEEEEC
T ss_pred CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchhH--HHH-hhccceeeccc-chh-----hhccCCEEEEC
Confidence 467899999996 778999999999999999999986542211 111 12233333332 121 24568999998
Q ss_pred cCCC
Q 028043 159 TGTT 162 (214)
Q Consensus 159 Ag~~ 162 (214)
-|+.
T Consensus 72 PGi~ 75 (93)
T d2jfga1 72 PGIA 75 (93)
T ss_dssp TTSC
T ss_pred CCCC
Confidence 8874
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=97.04 E-value=0.00016 Score=54.06 Aligned_cols=40 Identities=23% Similarity=0.257 Sum_probs=32.4
Q ss_pred CCEEEE-EcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHH
Q 028043 82 SKLVLV-AGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATT 121 (214)
Q Consensus 82 ~k~vlI-TGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~ 121 (214)
|.+++| +||+|++|...++.....|++|+++.|+.+..++
T Consensus 29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~ 69 (189)
T d1gu7a2 29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDE 69 (189)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHH
T ss_pred CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccch
Confidence 455555 7999999999999888899999999887655444
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.99 E-value=0.0014 Score=47.81 Aligned_cols=41 Identities=27% Similarity=0.297 Sum_probs=37.1
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHH
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA 119 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~ 119 (214)
..+.||+++|.| .|-||+.+|+.+...|++|++.+.++-+.
T Consensus 20 ~~l~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~a 60 (163)
T d1li4a1 20 VMIAGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPINA 60 (163)
T ss_dssp CCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred ceecCCEEEEec-cccccHHHHHHHHhCCCeeEeeecccchh
Confidence 456899999999 89999999999999999999999998553
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=96.98 E-value=0.00025 Score=51.05 Aligned_cols=36 Identities=17% Similarity=0.240 Sum_probs=28.1
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCC----CeEEEEEcChh
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRN----IKSRLLLRDPE 117 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G----~~V~~~~r~~~ 117 (214)
||+|.|.||||.+|+.+.+.|+++. .+++...++..
T Consensus 1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s 40 (146)
T d1t4ba1 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQL 40 (146)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSST
T ss_pred CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccc
Confidence 5789999999999999999887753 25666665543
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.98 E-value=0.00066 Score=49.13 Aligned_cols=43 Identities=19% Similarity=0.173 Sum_probs=37.1
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhc
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFG 124 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~ 124 (214)
.+.+|+|.|+ |+||...++.+...|++|+++++++++++.+++
T Consensus 27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~ 69 (168)
T d1rjwa2 27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE 69 (168)
T ss_dssp TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhhhh
Confidence 4678999975 999999999998999999999999999876654
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=96.96 E-value=0.00049 Score=50.33 Aligned_cols=75 Identities=17% Similarity=0.182 Sum_probs=49.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCCh-hccchhh----hCCCcE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNP-KDLDPAI----FEGVTH 154 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~-~~v~~~~----~~~~d~ 154 (214)
.|.+|+|.|+ ||+|...++.+...|+ .|+++++++++.+..+ ++... ++ .|..+. +.+.+.. -+++|+
T Consensus 28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak-~lGa~--~~--i~~~~~~~~~~~~~~~~~~~g~D~ 101 (176)
T d2fzwa2 28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-EFGAT--EC--INPQDFSKPIQEVLIEMTDGGVDY 101 (176)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HHTCS--EE--ECGGGCSSCHHHHHHHHTTSCBSE
T ss_pred CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHHH-HhCCc--EE--EeCCchhhHHHHHHHHHcCCCCcE
Confidence 4679999997 6899999999999997 5777778887766543 33211 11 233221 2222211 247999
Q ss_pred EEeccCC
Q 028043 155 VICCTGT 161 (214)
Q Consensus 155 li~~Ag~ 161 (214)
+|.+.|.
T Consensus 102 vid~~G~ 108 (176)
T d2fzwa2 102 SFECIGN 108 (176)
T ss_dssp EEECSCC
T ss_pred eeecCCC
Confidence 9999984
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=96.94 E-value=0.00076 Score=48.54 Aligned_cols=43 Identities=9% Similarity=0.101 Sum_probs=37.6
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhccc
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ 126 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~ 126 (214)
|+|.+.| +|-+|+++++.|.+.|++|++.+|++++.+++.+++
T Consensus 1 MkIg~IG-~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~ 43 (152)
T d2ahra2 1 MKIGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL 43 (152)
T ss_dssp CEEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH
T ss_pred CEEEEEe-ccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc
Confidence 4678887 899999999999999999999999999888776554
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.91 E-value=0.00062 Score=49.47 Aligned_cols=42 Identities=17% Similarity=0.170 Sum_probs=37.1
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhc
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFG 124 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~ 124 (214)
||+|.+.| .|-+|+.+|+.|+++|++|.+.+|++++.+.+.+
T Consensus 1 M~kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~ 42 (162)
T d3cuma2 1 MKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVA 42 (162)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHH
T ss_pred CCEEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhh
Confidence 46788997 8999999999999999999999999988776543
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=96.89 E-value=0.0011 Score=45.23 Aligned_cols=69 Identities=13% Similarity=0.124 Sum_probs=53.6
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhh-CCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIF-EGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~-~~~d~li 156 (214)
.+.+|.|.| +|-+|+-++.+..+.|+++++++.+++...... .-..+.+|..|.+.+.+... .++|+|-
T Consensus 10 ~~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~PA~~v------a~~~i~~~~~d~~~l~~~~~~~~~DviT 79 (111)
T d1kjqa2 10 AATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAPAMHV------AHRSHVINMLDGDALRRVVELEKPHYIV 79 (111)
T ss_dssp TCCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCGGGGG------SSEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CCCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCchhhc------CCeEEECCCCCHHHHHHHHHhhCCceEE
Confidence 446899999 799999999999999999999998876433211 12467899999999887443 2688874
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=96.84 E-value=0.0011 Score=48.18 Aligned_cols=42 Identities=24% Similarity=0.214 Sum_probs=36.0
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCC--eEEEEEcChhHHHHHhc
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDPEKATTLFG 124 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~ 124 (214)
||+|+|.| .|.||..+++.|.+.|+ +|++.+|+++..+...+
T Consensus 1 Mk~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~ 44 (171)
T d2g5ca2 1 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD 44 (171)
T ss_dssp CCEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH
T ss_pred CCEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHH
Confidence 47899998 69999999999999996 68899999988776543
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=96.79 E-value=0.00071 Score=49.73 Aligned_cols=42 Identities=19% Similarity=0.222 Sum_probs=37.3
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcc
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGK 125 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~ 125 (214)
|+|-|.| .|.+|..+++.|++.|++|.+.+|++++.+++.+.
T Consensus 2 MkIGvIG-lG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~ 43 (178)
T d1pgja2 2 MDVGVVG-LGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKA 43 (178)
T ss_dssp BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH
T ss_pred CEEEEEe-ehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHc
Confidence 4577887 89999999999999999999999999998887654
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=96.78 E-value=0.00078 Score=50.19 Aligned_cols=38 Identities=16% Similarity=0.065 Sum_probs=34.6
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHH
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATT 121 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~ 121 (214)
|+|.|.|| |-||+.+|..++..|++|++.+++++.++.
T Consensus 5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~ 42 (186)
T d1wdka3 5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQ 42 (186)
T ss_dssp SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHH
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhh
Confidence 67999996 999999999999999999999999887654
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=96.77 E-value=0.0007 Score=50.66 Aligned_cols=44 Identities=16% Similarity=0.125 Sum_probs=38.6
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhc
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFG 124 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~ 124 (214)
+.+++|.|.| +|..|.+++..|++.|++|.+.+|+++..+++.+
T Consensus 5 ~~m~KI~ViG-aG~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~ 48 (189)
T d1n1ea2 5 LYLNKAVVFG-SGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNE 48 (189)
T ss_dssp CCEEEEEEEC-CSHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHH
T ss_pred ceeceEEEEC-CCHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhh
Confidence 4557899999 6889999999999999999999999988877654
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=96.76 E-value=0.0031 Score=47.12 Aligned_cols=76 Identities=17% Similarity=0.145 Sum_probs=50.9
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccch--hhh--CCCcEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDP--AIF--EGVTHV 155 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~--~~~--~~~d~l 155 (214)
.|.+|+|.|+ |+||...+..+...|+ +|+++++++++++...+. +...+ .|-.+.+..++ .+. .++|++
T Consensus 25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~----Ga~~~-~~~~~~~~~~~i~~~t~g~g~D~v 98 (195)
T d1kola2 25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQ----GFEIA-DLSLDTPLHEQIAALLGEPEVDCA 98 (195)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT----TCEEE-ETTSSSCHHHHHHHHHSSSCEEEE
T ss_pred CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhhc----cccEE-EeCCCcCHHHHHHHHhCCCCcEEE
Confidence 5689999985 8999888888877787 688899999888765432 23322 23333222221 112 269999
Q ss_pred EeccCCC
Q 028043 156 ICCTGTT 162 (214)
Q Consensus 156 i~~Ag~~ 162 (214)
|.+.|..
T Consensus 99 id~vG~~ 105 (195)
T d1kola2 99 VDAVGFE 105 (195)
T ss_dssp EECCCTT
T ss_pred EECcccc
Confidence 9999853
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=96.73 E-value=0.001 Score=48.19 Aligned_cols=41 Identities=22% Similarity=0.242 Sum_probs=36.6
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhc
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFG 124 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~ 124 (214)
|+|-|.| .|-+|+.+|+.|++.|++|++.+|++++.+++.+
T Consensus 1 MkIgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~ 41 (161)
T d1vpda2 1 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIA 41 (161)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred CEEEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHH
Confidence 4688888 7999999999999999999999999998877654
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=96.66 E-value=0.0015 Score=49.20 Aligned_cols=39 Identities=18% Similarity=0.137 Sum_probs=35.0
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChh
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE 117 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~ 117 (214)
..+.||+|.|.| .|.||+.+++.|...|.+|++.++...
T Consensus 39 ~el~gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~ 77 (197)
T d1j4aa1 39 REVRDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRN 77 (197)
T ss_dssp CCGGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred ccccCCeEEEec-ccccchhHHHhHhhhcccccccCcccc
Confidence 457899999999 899999999999999999999987643
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=96.64 E-value=0.004 Score=46.09 Aligned_cols=38 Identities=29% Similarity=0.341 Sum_probs=34.4
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP 116 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~ 116 (214)
..+.||++.|.| .|.||+.+++.+...|.+|++.+|.+
T Consensus 38 ~~l~gk~vgIiG-~G~IG~~va~~l~~~g~~v~~~d~~~ 75 (181)
T d1qp8a1 38 PLIQGEKVAVLG-LGEIGTRVGKILAALGAQVRGFSRTP 75 (181)
T ss_dssp CCCTTCEEEEES-CSTHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CcccCceEEEec-cccccccceeeeeccccccccccccc
Confidence 347899999999 78899999999999999999999875
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=96.60 E-value=0.0015 Score=46.77 Aligned_cols=43 Identities=21% Similarity=0.245 Sum_probs=36.7
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCC-CeEEEEEcChhHHHHHhccc
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRDPEKATTLFGKQ 126 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~ 126 (214)
|+|.+.| .|-+|.++++.|++.| ++|.+.+|++++.+++.++.
T Consensus 1 MkI~fIG-~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~ 44 (152)
T d1yqga2 1 MNVYFLG-GGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKEL 44 (152)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHT
T ss_pred CEEEEEc-CcHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhc
Confidence 4688888 5999999999998877 89999999999988876543
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.56 E-value=0.0014 Score=48.34 Aligned_cols=76 Identities=14% Similarity=0.241 Sum_probs=46.6
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh--hHHHHHhcccCCCC--EEEEEecCCChhccchhhhCCCcEEEec
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP--EKATTLFGKQDEET--LQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~--~~~~~~~~~~~~~~--~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
|+|.|.| +|..|.++|..|++.|++|.+.+|+. +..+.+.+...... ......++.-.+++++ .+.+.|+||.+
T Consensus 1 MkI~ViG-aG~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~ad~Ii~a 78 (180)
T d1txga2 1 MIVSILG-AGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEK-CLENAEVVLLG 78 (180)
T ss_dssp CEEEEES-CCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHH-HHTTCSEEEEC
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHH-HHhccchhhcc
Confidence 6799999 69999999999999999999999853 33444433211111 1101111222334443 35678888775
Q ss_pred cC
Q 028043 159 TG 160 (214)
Q Consensus 159 Ag 160 (214)
..
T Consensus 79 vp 80 (180)
T d1txga2 79 VS 80 (180)
T ss_dssp SC
T ss_pred cc
Confidence 53
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.54 E-value=0.0016 Score=48.90 Aligned_cols=41 Identities=17% Similarity=0.110 Sum_probs=36.6
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhc
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFG 124 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~ 124 (214)
|+|.|.| .|.+|..+|..|++.|++|++.|.++++.+.+.+
T Consensus 1 MkI~ViG-lG~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln~ 41 (202)
T d1mv8a2 1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQ 41 (202)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHT
T ss_pred CEEEEEC-CCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhcc
Confidence 5688886 8999999999999999999999999998887653
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=96.53 E-value=0.0063 Score=44.09 Aligned_cols=75 Identities=17% Similarity=0.122 Sum_probs=49.3
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccc-h---hh-hCCCcE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLD-P---AI-FEGVTH 154 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~-~---~~-~~~~d~ 154 (214)
.+.+|+|.|+ |++|...+..+...|. +|+++++++++++...+. . +. ...|..+.+... + .. -+++|+
T Consensus 28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~-G---Ad-~~in~~~~~~~~~~~~~~~~~~G~d~ 101 (175)
T d1cdoa2 28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVF-G---AT-DFVNPNDHSEPISQVLSKMTNGGVDF 101 (175)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT-T---CC-EEECGGGCSSCHHHHHHHHHTSCBSE
T ss_pred CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHHc-C---Cc-EEEcCCCcchhHHHHHHhhccCCcce
Confidence 4679999985 6677777777777776 688899999988765532 1 11 123444333221 1 11 247999
Q ss_pred EEeccCC
Q 028043 155 VICCTGT 161 (214)
Q Consensus 155 li~~Ag~ 161 (214)
++-+.|.
T Consensus 102 vid~~G~ 108 (175)
T d1cdoa2 102 SLECVGN 108 (175)
T ss_dssp EEECSCC
T ss_pred eeeecCC
Confidence 9999985
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=96.43 E-value=0.0019 Score=47.42 Aligned_cols=41 Identities=12% Similarity=0.155 Sum_probs=37.1
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhc
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFG 124 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~ 124 (214)
++|-|.| -|.+|..+++.|++.|++|++.+|++++.+++.+
T Consensus 3 ~nIg~IG-lG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~ 43 (176)
T d2pgda2 3 ADIALIG-LAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLA 43 (176)
T ss_dssp BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHH
T ss_pred CcEEEEe-EhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH
Confidence 4688888 6999999999999999999999999999888754
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=96.31 E-value=0.0089 Score=39.40 Aligned_cols=72 Identities=15% Similarity=0.188 Sum_probs=48.7
Q ss_pred CCCCCEEEEEcCchHHH-HHHHHHHHHCCCeEEEEEcChhHH-HHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEE
Q 028043 79 ASSSKLVLVAGGSGGVG-QLVVASLLSRNIKSRLLLRDPEKA-TTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVI 156 (214)
Q Consensus 79 ~~~~k~vlITGasggIG-~~la~~L~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li 156 (214)
..+.|++.+.| -||+| +++|+.|.++|++|.+.|+..... +.+.+ .++.+..++- ++. ..+.|.||
T Consensus 5 ~~~~~~ihfiG-igG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~----~Gi~v~~g~~--~~~-----i~~~d~vV 72 (96)
T d1p3da1 5 MRRVQQIHFIG-IGGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQ----AGAKIYIGHA--EEH-----IEGASVVV 72 (96)
T ss_dssp CTTCCEEEEET-TTSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHH----TTCEEEESCC--GGG-----GTTCSEEE
T ss_pred chhCCEEEEEE-ECHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHH----CCCeEEECCc--ccc-----CCCCCEEE
Confidence 34568999998 56667 678999999999999999975433 33332 2344443322 222 34689999
Q ss_pred eccCCC
Q 028043 157 CCTGTT 162 (214)
Q Consensus 157 ~~Ag~~ 162 (214)
...++.
T Consensus 73 ~S~AI~ 78 (96)
T d1p3da1 73 VSSAIK 78 (96)
T ss_dssp ECTTSC
T ss_pred ECCCcC
Confidence 888864
|
| >d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.28 E-value=0.014 Score=44.14 Aligned_cols=77 Identities=8% Similarity=-0.048 Sum_probs=52.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--------------------CCCEEEEEecCCC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--------------------EETLQVCKGDTRN 140 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--------------------~~~~~~v~~Di~d 140 (214)
.+++||.-|++.| ..+..|+++|++|++++-+++..+...+... ..++.++.+|+.+
T Consensus 45 ~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~ 121 (229)
T d2bzga1 45 SGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCSIFD 121 (229)
T ss_dssp CSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCGGG
T ss_pred CCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEcchhh
Confidence 4679999997665 4577889999999999999988765433211 2356777788765
Q ss_pred hhccchhhhCCCcEEEeccCCCC
Q 028043 141 PKDLDPAIFEGVTHVICCTGTTA 163 (214)
Q Consensus 141 ~~~v~~~~~~~~d~li~~Ag~~~ 163 (214)
..... .+..|+++-.....+
T Consensus 122 l~~~~---~~~fd~i~~~~~l~~ 141 (229)
T d2bzga1 122 LPRTN---IGKFDMIWDRGALVA 141 (229)
T ss_dssp GGGSC---CCCEEEEEESSSTTT
T ss_pred ccccc---cCceeEEEEEEEEEe
Confidence 54322 235677776665543
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=96.24 E-value=0.0026 Score=47.67 Aligned_cols=38 Identities=16% Similarity=0.064 Sum_probs=34.6
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP 116 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~ 116 (214)
..+.||++.|.| .|.||+.+++.+...|.+|+..++..
T Consensus 45 ~eL~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~ 82 (193)
T d1mx3a1 45 ARIRGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYL 82 (193)
T ss_dssp CCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTS
T ss_pred eeeeCceEEEec-cccccccceeeeeccccceeeccCcc
Confidence 457899999998 89999999999999999999998854
|
| >d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Pseudomonas syringae [TaxId: 317]
Probab=96.20 E-value=0.014 Score=42.19 Aligned_cols=75 Identities=11% Similarity=-0.011 Sum_probs=49.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC---------------CCCEEEEEecCCChhccc
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---------------EETLQVCKGDTRNPKDLD 145 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---------------~~~~~~v~~Di~d~~~v~ 145 (214)
.+++||..|++.| ..+..|+++|++|++++.++..++...+... .....++.+|..+.....
T Consensus 20 ~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~ 96 (201)
T d1pjza_ 20 PGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARD 96 (201)
T ss_dssp TTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHH
T ss_pred CCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceeccccccccccc
Confidence 4679999996655 3666888899999999999987766544332 223456667776543221
Q ss_pred hhhhCCCcEEEeccCC
Q 028043 146 PAIFEGVTHVICCTGT 161 (214)
Q Consensus 146 ~~~~~~~d~li~~Ag~ 161 (214)
....|.|+.....
T Consensus 97 ---~~~~D~i~~~~~l 109 (201)
T d1pjza_ 97 ---IGHCAAFYDRAAM 109 (201)
T ss_dssp ---HHSEEEEEEESCG
T ss_pred ---ccceeEEEEEeee
Confidence 2356777655443
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=96.19 E-value=0.0033 Score=45.95 Aligned_cols=76 Identities=12% Similarity=0.094 Sum_probs=59.1
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccCC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGT 161 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag~ 161 (214)
.-+|+|.| .|-.|.+-++.....|++|.++|.++++++++..... ..++ .-..+.+.+++ .+...|+||..+-+
T Consensus 32 pa~V~ViG-aGvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~-~~~~---~~~~~~~~l~~-~~~~aDivI~aali 105 (168)
T d1pjca1 32 PGKVVILG-GGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFG-SRVE---LLYSNSAEIET-AVAEADLLIGAVLV 105 (168)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG-GGSE---EEECCHHHHHH-HHHTCSEEEECCCC
T ss_pred CcEEEEEC-CChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhc-ccce---eehhhhhhHHH-hhccCcEEEEeeec
Confidence 46899999 6899999999999999999999999999988765543 2233 23456666766 36789999999876
Q ss_pred CC
Q 028043 162 TA 163 (214)
Q Consensus 162 ~~ 163 (214)
..
T Consensus 106 pG 107 (168)
T d1pjca1 106 PG 107 (168)
T ss_dssp TT
T ss_pred CC
Confidence 54
|
| >d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.19 E-value=0.0023 Score=47.08 Aligned_cols=38 Identities=18% Similarity=0.049 Sum_probs=34.6
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD 115 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~ 115 (214)
.++.||+++|.|.|.-+|+-++..|+++|+.|..+..+
T Consensus 25 ~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~ 62 (171)
T d1edza1 25 NRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN 62 (171)
T ss_dssp CTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccc
Confidence 36789999999999999999999999999999987654
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=96.14 E-value=0.0081 Score=39.10 Aligned_cols=69 Identities=13% Similarity=0.096 Sum_probs=45.6
Q ss_pred CEEEEEcCchHHH-HHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccCC
Q 028043 83 KLVLVAGGSGGVG-QLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTGT 161 (214)
Q Consensus 83 k~vlITGasggIG-~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag~ 161 (214)
|+|-+.| -||+| +++|+.|.++|++|.+.|+.+....+..+ ..++.+..+ .+++.+ .+.|.||...++
T Consensus 2 ~~ihfiG-IgG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~---~~Gi~i~~g--h~~~~i-----~~~d~vV~SsAI 70 (89)
T d1j6ua1 2 MKIHFVG-IGGIGMSAVALHEFSNGNDVYGSNIEETERTAYLR---KLGIPIFVP--HSADNW-----YDPDLVIKTPAV 70 (89)
T ss_dssp CEEEEET-TTSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHH---HTTCCEESS--CCTTSC-----CCCSEEEECTTC
T ss_pred cEEEEEe-ECHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHH---HCCCeEEee--eccccc-----CCCCEEEEecCc
Confidence 5677777 57777 47899999999999999998644322222 233433322 233333 458999999887
Q ss_pred C
Q 028043 162 T 162 (214)
Q Consensus 162 ~ 162 (214)
.
T Consensus 71 ~ 71 (89)
T d1j6ua1 71 R 71 (89)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.11 E-value=0.0029 Score=45.03 Aligned_cols=35 Identities=31% Similarity=0.435 Sum_probs=27.9
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCC---eEEEEEcChh
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNI---KSRLLLRDPE 117 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~---~V~~~~r~~~ 117 (214)
++|.|.||||.+|+++++.|.++++ ++..++.+..
T Consensus 3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~ 40 (144)
T d2hjsa1 3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAES 40 (144)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeeccc
Confidence 5799999999999999999987654 5666655443
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=96.09 E-value=0.0051 Score=46.42 Aligned_cols=36 Identities=33% Similarity=0.407 Sum_probs=31.9
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcC
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD 115 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~ 115 (214)
+...|+|+|.| +|-.|...|..|+++|++|.+++|+
T Consensus 3 ~~~~~kVvVIG-aGiaGl~~A~~L~~~G~~V~vier~ 38 (268)
T d1c0pa1 3 MHSQKRVVVLG-SGVIGLSSALILARKGYSVHILARD 38 (268)
T ss_dssp CCCSCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCCcEEEEC-ccHHHHHHHHHHHHCCCCEEEEeCC
Confidence 33457899999 7999999999999999999999985
|
| >d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Vibrio cholerae [TaxId: 666]
Probab=96.06 E-value=0.0036 Score=44.77 Aligned_cols=33 Identities=18% Similarity=0.295 Sum_probs=25.3
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCC----CeEEEEEcC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRN----IKSRLLLRD 115 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G----~~V~~~~r~ 115 (214)
|+|.|.||||..|+++++.|+++. .++..++.+
T Consensus 1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~ 37 (147)
T d1mb4a1 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTS 37 (147)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESS
T ss_pred CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccc
Confidence 579999999999999999887643 355554443
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=96.05 E-value=0.0049 Score=42.36 Aligned_cols=35 Identities=20% Similarity=0.388 Sum_probs=31.5
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChh
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE 117 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~ 117 (214)
.|+++|.| +|.+|.++|..|.++|.+|.++.+.+.
T Consensus 30 ~~~vvIIG-gG~iG~E~A~~l~~~g~~Vtli~~~~~ 64 (121)
T d1d7ya2 30 QSRLLIVG-GGVIGLELAATARTAGVHVSLVETQPR 64 (121)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCeEEEEC-cchhHHHHHHHhhcccceEEEEeeccc
Confidence 47899998 799999999999999999999998753
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=96.04 E-value=0.0057 Score=42.06 Aligned_cols=35 Identities=20% Similarity=0.160 Sum_probs=31.2
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP 116 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~ 116 (214)
.+|+|+|.| +|.+|.++|..|++.|.+|+++.+.+
T Consensus 29 ~~k~vvViG-gG~iG~E~A~~l~~~g~~Vtlie~~~ 63 (123)
T d1nhpa2 29 EVNNVVVIG-SGYIGIEAAEAFAKAGKKVTVIDILD 63 (123)
T ss_dssp TCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCEEEEEC-ChHHHHHHHHHhhccceEEEEEEecC
Confidence 357899998 79999999999999999999998864
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=96.01 E-value=0.012 Score=43.70 Aligned_cols=38 Identities=13% Similarity=0.149 Sum_probs=34.1
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP 116 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~ 116 (214)
..+.+|++.|.| .|.||+.+++.+...|.+|...++..
T Consensus 43 ~~l~g~tvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~ 80 (191)
T d1gdha1 43 EKLDNKTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHR 80 (191)
T ss_dssp CCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSC
T ss_pred ceecccceEEee-cccchHHHHHHHHhhccccccccccc
Confidence 456799999999 89999999999999999999998754
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.00 E-value=0.0041 Score=44.25 Aligned_cols=37 Identities=30% Similarity=0.405 Sum_probs=32.6
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcC
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD 115 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~ 115 (214)
..++||+|||.|| |.+|..-++.|++.|++|++++..
T Consensus 9 ~~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~ 45 (150)
T d1kyqa1 9 HQLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD 45 (150)
T ss_dssp ECCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred eeeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3468999999995 889999999999999999999653
|
| >d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Cow (Bos taurus) [TaxId: 9913]
Probab=95.95 E-value=0.022 Score=45.14 Aligned_cols=35 Identities=26% Similarity=0.206 Sum_probs=31.8
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEE
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLL 113 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~ 113 (214)
.++.+|+|+|-| .|.+|+++++.|.+.|++|+.++
T Consensus 32 ~~L~gktvaIqG-fGnVG~~~A~~L~e~Gakvv~vs 66 (293)
T d1hwxa1 32 PGFGDKTFAVQG-FGNVGLHSMRYLHRFGAKCVAVG 66 (293)
T ss_dssp SSSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEE
Confidence 457899999999 69999999999999999998876
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=95.79 E-value=0.0067 Score=41.14 Aligned_cols=34 Identities=24% Similarity=0.248 Sum_probs=31.0
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChh
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE 117 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~ 117 (214)
|+++|.| +|.||.++|..|.+.|.+|+++.|.+.
T Consensus 23 ~~v~IiG-gG~ig~E~A~~l~~~G~~Vtlve~~~~ 56 (117)
T d1ebda2 23 KSLVVIG-GGYIGIELGTAYANFGTKVTILEGAGE 56 (117)
T ss_dssp SEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CeEEEEC-CCccceeeeeeecccccEEEEEEecce
Confidence 7899999 799999999999999999999988653
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=95.77 E-value=0.0082 Score=46.10 Aligned_cols=35 Identities=31% Similarity=0.367 Sum_probs=30.3
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcC
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRD 115 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~ 115 (214)
+++++|+|.| .||+|++++..|+..|. +++++|.+
T Consensus 28 L~~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D 63 (247)
T d1jw9b_ 28 LKDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFD 63 (247)
T ss_dssp HHHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred HhCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCc
Confidence 3557999999 78999999999999998 58888765
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=95.75 E-value=0.0092 Score=44.16 Aligned_cols=38 Identities=16% Similarity=0.120 Sum_probs=34.1
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP 116 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~ 116 (214)
..+.++++.|.| .|.||+++++.|...|.+|...++..
T Consensus 40 ~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~ 77 (188)
T d2naca1 40 YDLEAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHR 77 (188)
T ss_dssp CCCTTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSC
T ss_pred eeccccceeecc-ccccchhhhhhhhccCceEEEEeecc
Confidence 456889999999 89999999999999999999999853
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.61 E-value=0.0073 Score=41.44 Aligned_cols=33 Identities=18% Similarity=0.192 Sum_probs=30.5
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP 116 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~ 116 (214)
|+++|.| +|.||.++|..|.+.|.+|.++.|++
T Consensus 24 ~~~vIiG-~G~ig~E~A~~l~~lG~~Vtii~~~~ 56 (122)
T d1v59a2 24 KRLTIIG-GGIIGLEMGSVYSRLGSKVTVVEFQP 56 (122)
T ss_dssp SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CeEEEEC-CCchHHHHHHHHHhhCcceeEEEecc
Confidence 6899999 79999999999999999999998864
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.57 E-value=0.031 Score=40.63 Aligned_cols=79 Identities=14% Similarity=0.068 Sum_probs=53.8
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
++.||+|+|.|.+.-+|+-++..|+++|+.|..+......+.+... . ..++..=...+..++...+ +.+++|-.
T Consensus 36 ~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~~~~~---~--aDivi~a~G~~~~i~~~~v-k~g~iviD 109 (170)
T d1a4ia1 36 PIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDEEVN---K--GDILVVATGQPEMVKGEWI-KPGAIVID 109 (170)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHHHHT---T--CSEEEECCCCTTCBCGGGS-CTTCEEEE
T ss_pred ccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHHHHHh---h--ccchhhccccccccccccc-cCCCeEec
Confidence 4689999999999999999999999999999999876655544332 2 2233333444454554322 34555556
Q ss_pred cCCCC
Q 028043 159 TGTTA 163 (214)
Q Consensus 159 Ag~~~ 163 (214)
+|+..
T Consensus 110 vgi~~ 114 (170)
T d1a4ia1 110 CGINY 114 (170)
T ss_dssp CCCBC
T ss_pred cCccc
Confidence 67654
|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=95.56 E-value=0.021 Score=41.27 Aligned_cols=41 Identities=27% Similarity=0.297 Sum_probs=37.4
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHH
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA 119 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~ 119 (214)
..+.||+++|.| =|-+|+.+|++|...|++|+++..+|-+.
T Consensus 19 ~~laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi~a 59 (163)
T d1v8ba1 19 FLISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPICA 59 (163)
T ss_dssp CCCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHH
T ss_pred ceecCCEEEEec-ccccchhHHHHHHhCCCEEEEEecCchhh
Confidence 457899999999 89999999999999999999999999654
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=95.52 E-value=0.0075 Score=41.30 Aligned_cols=33 Identities=18% Similarity=0.332 Sum_probs=30.2
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP 116 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~ 116 (214)
|+++|.| +|.+|.++|..|.+.|++|+++.|.+
T Consensus 33 ~~vvIiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~ 65 (122)
T d1xhca2 33 GEAIIIG-GGFIGLELAGNLAEAGYHVKLIHRGA 65 (122)
T ss_dssp SEEEEEE-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CcEEEEC-CcHHHHHHHHHhhcccceEEEEeccc
Confidence 6899988 79999999999999999999998864
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.50 E-value=0.0084 Score=41.26 Aligned_cols=33 Identities=18% Similarity=0.290 Sum_probs=30.4
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP 116 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~ 116 (214)
|+++|.| +|.||.++|..|.+.|.+|+++.|.+
T Consensus 23 k~vvIvG-gG~iG~E~A~~l~~~G~~Vtlv~~~~ 55 (125)
T d3grsa2 23 GRSVIVG-AGYIAVEMAGILSALGSKTSLMIRHD 55 (125)
T ss_dssp SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CEEEEEc-CCccHHHHHHHHhcCCcEEEEEeecc
Confidence 7899999 68999999999999999999999863
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=95.49 E-value=0.01 Score=40.49 Aligned_cols=34 Identities=15% Similarity=0.062 Sum_probs=30.8
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP 116 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~ 116 (214)
.++++|.| +|.||.++|..|++.|.+|.++.|.+
T Consensus 22 p~~i~IiG-~G~ig~E~A~~l~~~G~~Vtiv~~~~ 55 (119)
T d3lada2 22 PGKLGVIG-AGVIGLELGSVWARLGAEVTVLEAMD 55 (119)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCeEEEEC-CChHHHHHHHHHHHcCCceEEEEeec
Confidence 37899999 79999999999999999999998763
|
| >d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Pyrobaculum islandicum [TaxId: 2277]
Probab=95.49 E-value=0.038 Score=42.43 Aligned_cols=35 Identities=23% Similarity=0.203 Sum_probs=31.5
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEc
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR 114 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r 114 (214)
++++|+|+|-| -|.+|+++++.|.+.|++|+.++.
T Consensus 28 ~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD 62 (242)
T d1v9la1 28 GIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSD 62 (242)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeec
Confidence 46789999998 899999999999999999987763
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=95.48 E-value=0.0081 Score=40.96 Aligned_cols=33 Identities=21% Similarity=0.288 Sum_probs=30.3
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP 116 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~ 116 (214)
|+++|.| +|.||-++|..|.+.|.+|+++.|.+
T Consensus 23 ~~v~IiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~ 55 (117)
T d1onfa2 23 KKIGIVG-SGYIAVELINVIKRLGIDSYIFARGN 55 (117)
T ss_dssp SEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred CEEEEEC-CchHHHHHHHHHHhccccceeeehhc
Confidence 7899999 79999999999999999999999853
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=95.46 E-value=0.0091 Score=40.51 Aligned_cols=33 Identities=21% Similarity=0.180 Sum_probs=30.2
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP 116 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~ 116 (214)
|+++|.| +|.+|.++|..|.+.|.+|.++.|.+
T Consensus 22 ~~vvIiG-gG~ig~E~A~~l~~~G~~Vtlve~~~ 54 (116)
T d1gesa2 22 ERVAVVG-AGYIGVELGGVINGLGAKTHLFEMFD 54 (116)
T ss_dssp SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CEEEEEC-CChhhHHHHHHhhccccEEEEEeecc
Confidence 6899988 79999999999999999999998864
|
| >d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=95.44 E-value=0.0073 Score=45.95 Aligned_cols=34 Identities=21% Similarity=0.235 Sum_probs=30.5
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP 116 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~ 116 (214)
+|+|+|.| +|--|...|.+|+++|++|+++.+++
T Consensus 1 ~KkV~IIG-aG~aGL~aA~~La~~G~~V~vlE~~~ 34 (373)
T d1seza1 1 AKRVAVIG-AGVSGLAAAYKLKIHGLNVTVFEAEG 34 (373)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred CCEEEEEC-cCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 58999999 68899999999999999999998754
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=95.41 E-value=0.015 Score=42.77 Aligned_cols=38 Identities=24% Similarity=0.305 Sum_probs=33.6
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP 116 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~ 116 (214)
+..+.|+|+|.| +|-.|.+.|..|+++|++|+++.+++
T Consensus 39 ~~~~~k~V~IIG-aGPAGL~AA~~la~~G~~Vtl~E~~~ 76 (179)
T d1ps9a3 39 PAVQKKNLAVVG-AGPAGLAFAINAAARGHQVTLFDAHS 76 (179)
T ss_dssp SCSSCCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCCCCcEEEEEC-ccHHHHHHHHHHHhhccceEEEeccC
Confidence 334679999999 79999999999999999999999864
|
| >d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative semialdehyde dehydrogenase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=95.40 E-value=0.0085 Score=44.18 Aligned_cols=32 Identities=22% Similarity=0.324 Sum_probs=26.0
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCC-CeEEEEE
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLL 113 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G-~~V~~~~ 113 (214)
..+|.|.||||..|+++++.|.++- .++..+.
T Consensus 5 kikVaIlGATGyvG~elirLL~~HP~~ei~~l~ 37 (183)
T d2cvoa1 5 EVRIAVLGASGYTGAEIVRLLANHPQFRIKVMT 37 (183)
T ss_dssp CEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred ccEEEEECcccHHHHHHHHHHHhCCCceEEEEe
Confidence 4579999999999999999998864 3555554
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=95.36 E-value=0.0089 Score=42.43 Aligned_cols=38 Identities=26% Similarity=0.220 Sum_probs=31.8
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHH
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATT 121 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~ 121 (214)
|+|.|.| .|.+|+.+++.|+++|++|++.+++.++...
T Consensus 1 MkIgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~ 38 (152)
T d1i36a2 1 LRVGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTI 38 (152)
T ss_dssp CEEEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHH
T ss_pred CEEEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHH
Confidence 4678887 7999999999999999999998887655433
|
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.35 E-value=0.007 Score=50.66 Aligned_cols=34 Identities=26% Similarity=0.398 Sum_probs=29.7
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRD 115 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~ 115 (214)
++.+|+|.|+ ||+|.++++.|+..|. ++.++|.+
T Consensus 36 ~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D 70 (426)
T d1yovb1 36 DTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMD 70 (426)
T ss_dssp HHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCC
T ss_pred hcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECC
Confidence 4568999995 8899999999999998 68888875
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=95.34 E-value=0.011 Score=41.06 Aligned_cols=34 Identities=26% Similarity=0.376 Sum_probs=31.1
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP 116 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~ 116 (214)
.|+++|.| +|.+|.++|..|.+.|.+|.++.+.+
T Consensus 35 ~k~v~VIG-gG~iG~E~A~~l~~~g~~Vtvie~~~ 68 (133)
T d1q1ra2 35 DNRLVVIG-GGYIGLEVAATAIKANMHVTLLDTAA 68 (133)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCEEEEEC-CchHHHHHHHHHHhhCcceeeeeecc
Confidence 47899998 79999999999999999999998864
|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=95.24 E-value=0.016 Score=39.28 Aligned_cols=35 Identities=14% Similarity=0.164 Sum_probs=31.7
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP 116 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~ 116 (214)
.+|+++|.| +|.||.++|..|.+.|.+|.++.|.+
T Consensus 21 ~~~~vvVvG-gG~ig~E~A~~l~~~g~~vt~i~~~~ 55 (121)
T d1mo9a2 21 PGSTVVVVG-GSKTAVEYGCFFNATGRRTVMLVRTE 55 (121)
T ss_dssp CCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhcchhheEeeccc
Confidence 368999998 79999999999999999999998864
|
| >d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Nicotinamide nucleotide transhydrogenase dI component species: Rhodospirillum rubrum [TaxId: 1085]
Probab=95.17 E-value=0.022 Score=41.95 Aligned_cols=42 Identities=17% Similarity=0.020 Sum_probs=37.0
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcc
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGK 125 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~ 125 (214)
-+|+|.| .|-.|.+-++.....|++|.++|.++++++++.+.
T Consensus 30 a~VvViG-aGvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l 71 (183)
T d1l7da1 30 ARVLVFG-VGVAGLQAIATAKRLGAVVMATDVRAATKEQVESL 71 (183)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHT
T ss_pred cEEEEEc-CcHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHh
Confidence 4899999 68899999999999999999999999888877643
|
| >d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: UDP-glucose dehydrogenase (UDPGDH) species: Streptococcus pyogenes [TaxId: 1314]
Probab=95.12 E-value=0.015 Score=42.80 Aligned_cols=40 Identities=28% Similarity=0.217 Sum_probs=34.0
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhc
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFG 124 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~ 124 (214)
|+|.|.| .|.+|..+|..| ++|++|++.|.++++.+.+..
T Consensus 1 MkI~ViG-lG~vGl~~a~~~-a~g~~V~g~Din~~~v~~l~~ 40 (196)
T d1dlja2 1 MKIAVAG-SGYVGLSLGVLL-SLQNEVTIVDILPSKVDKINN 40 (196)
T ss_dssp CEEEEEC-CSHHHHHHHHHH-TTTSEEEEECSCHHHHHHHHT
T ss_pred CEEEEEC-CChhHHHHHHHH-HCCCcEEEEECCHHHHHHHhh
Confidence 5688887 899999999766 579999999999998887654
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=95.12 E-value=0.013 Score=40.65 Aligned_cols=71 Identities=17% Similarity=0.079 Sum_probs=49.6
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEE-EcChhHHHHHhcccCCCCEEEEEecCCChhccchhh----hCCCcEEEe
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLL-LRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI----FEGVTHVIC 157 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~----~~~~d~li~ 157 (214)
|+|.|.|++|.+|+.+++.+.++|+++++. +++.. +.+.... +..|++.++.+.+.+ -.+.-+|+-
T Consensus 1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~------~~~~~~D---VvIDFS~p~~~~~~l~~~~~~~~p~ViG 71 (128)
T d1vm6a3 1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGV------EELDSPD---VVIDFSSPEALPKTVDLCKKYRAGLVLG 71 (128)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEE------EECSCCS---EEEECSCGGGHHHHHHHHHHHTCEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcH------HHhccCC---EEEEecCHHHHHHHHHHHHhcCCCEEEE
Confidence 579999999999999999999999997754 44321 1122223 467999999877632 126777776
Q ss_pred ccCCC
Q 028043 158 CTGTT 162 (214)
Q Consensus 158 ~Ag~~ 162 (214)
.-|..
T Consensus 72 TTG~~ 76 (128)
T d1vm6a3 72 TTALK 76 (128)
T ss_dssp CCSCC
T ss_pred cCCCC
Confidence 55543
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=95.09 E-value=0.013 Score=40.21 Aligned_cols=32 Identities=19% Similarity=0.216 Sum_probs=29.5
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD 115 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~ 115 (214)
++++|.| +|.||.++|..|.+.|.+|.++.|+
T Consensus 21 ~~vvIIG-gG~iG~E~A~~l~~lG~~Vtii~~~ 52 (122)
T d1h6va2 21 GKTLVVG-ASYVALECAGFLAGIGLDVTVMVRS 52 (122)
T ss_dssp CSEEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CeEEEEC-CCccHHHHHHHHhhcCCeEEEEEec
Confidence 5789998 7999999999999999999999886
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=95.03 E-value=0.011 Score=39.93 Aligned_cols=33 Identities=12% Similarity=0.158 Sum_probs=30.0
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP 116 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~ 116 (214)
|+++|.| +|.+|.++|..|.+.|++|.++.|.+
T Consensus 22 ~~vvIiG-gG~~G~E~A~~l~~~g~~Vtlve~~~ 54 (115)
T d1lvla2 22 QHLVVVG-GGYIGLELGIAYRKLGAQVSVVEARE 54 (115)
T ss_dssp SEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CeEEEEC-CCHHHHHHHHHHhhcccceEEEeeec
Confidence 6888888 79999999999999999999998853
|
| >d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Thermotoga maritima [TaxId: 2336]
Probab=95.02 E-value=0.0068 Score=44.61 Aligned_cols=34 Identities=21% Similarity=0.125 Sum_probs=26.9
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCC-CeEEEEEcC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRN-IKSRLLLRD 115 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G-~~V~~~~r~ 115 (214)
|++|.|.||||.+|+++++.|.++- .++..+..+
T Consensus 1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~ 35 (176)
T d1vkna1 1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSR 35 (176)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECS
T ss_pred CeEEEEECCCcHHHHHHHHHHHhCCCceEEEeecc
Confidence 4689999999999999999998854 466555433
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=94.97 E-value=0.0099 Score=44.46 Aligned_cols=39 Identities=21% Similarity=0.183 Sum_probs=34.8
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChh
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE 117 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~ 117 (214)
..+.+|++.|.| .|.||+.+++.|...|.+|++.++...
T Consensus 41 ~~l~~ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~ 79 (199)
T d1dxya1 41 KELGQQTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYPM 79 (199)
T ss_dssp CCGGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred ccccceeeeeee-cccccccccccccccceeeeccCCccc
Confidence 456789999999 899999999999999999999998643
|
| >d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=94.92 E-value=0.0058 Score=40.96 Aligned_cols=39 Identities=15% Similarity=-0.011 Sum_probs=32.2
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChh
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE 117 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~ 117 (214)
..++||+|+|.| +|--|..++..|++.+.+|+...|+..
T Consensus 28 ~~f~gK~VlVVG-~g~Sa~dia~~l~~~ak~v~~~~~r~~ 66 (107)
T d2gv8a2 28 ELFVGESVLVVG-GASSANDLVRHLTPVAKHPIYQSLLGG 66 (107)
T ss_dssp GGGTTCCEEEEC-SSHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred hhcCCCeEEEEC-CCCCHHHHHHHHHHhcCEEEEEEecCc
Confidence 457899999999 568899999999998888777777653
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=94.91 E-value=0.012 Score=42.65 Aligned_cols=34 Identities=12% Similarity=0.131 Sum_probs=30.5
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCe-EEEEEcCh
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRDP 116 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~-V~~~~r~~ 116 (214)
+|+|+|.| +|-.|...|..|+++|++ |+++.|++
T Consensus 4 ~~kVaIIG-aGpaGl~aA~~l~~~G~~~V~v~E~~~ 38 (196)
T d1gtea4 4 SAKIALLG-AGPASISCASFLARLGYSDITIFEKQE 38 (196)
T ss_dssp GCCEEEEC-CSHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred CCEEEEEC-ChHHHHHHHHHHHHCCCCeEEEEEecC
Confidence 58899999 799999999999999995 99998864
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=94.84 E-value=0.063 Score=38.78 Aligned_cols=78 Identities=13% Similarity=0.067 Sum_probs=51.5
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
++.||+|+|.|.+.-+|+-++..|.++|++|+++......+.+.... ..++..-+..+..+....+ +...++-.
T Consensus 34 ~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~~~~~~-----ADivI~a~G~p~~i~~~~v-k~g~vvID 107 (166)
T d1b0aa1 34 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVEN-----ADLLIVAVGKPGFIPGDWI-KEGAIVID 107 (166)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHHHHH-----CSEEEECSCCTTCBCTTTS-CTTCEEEE
T ss_pred ccccceEEEEeccccccHHHHHHHHHhhccccccccccchhHHHHhh-----hhHhhhhccCccccccccc-CCCcEEEe
Confidence 46899999999999999999999999999999887765544443221 1233333444444443222 24455556
Q ss_pred cCCC
Q 028043 159 TGTT 162 (214)
Q Consensus 159 Ag~~ 162 (214)
+|+.
T Consensus 108 vGi~ 111 (166)
T d1b0aa1 108 VGIN 111 (166)
T ss_dssp CCCE
T ss_pred cCce
Confidence 6654
|
| >d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Klebsiella pneumoniae [TaxId: 573]
Probab=94.79 E-value=0.017 Score=45.97 Aligned_cols=35 Identities=20% Similarity=0.352 Sum_probs=31.5
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChh
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE 117 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~ 117 (214)
+|+|+|.| +|--|..+|..|++.|++|.++.++..
T Consensus 2 ~KKI~IIG-aG~sGL~aA~~L~k~G~~V~viEk~~~ 36 (314)
T d2bi7a1 2 SKKILIVG-AGFSGAVIGRQLAEKGHQVHIIDQRDH 36 (314)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCEEEEEC-CcHHHHHHHHHHHhCCCCEEEEECCCC
Confidence 58999999 789999999999999999999988763
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=94.75 E-value=0.011 Score=40.53 Aligned_cols=33 Identities=15% Similarity=0.102 Sum_probs=30.5
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP 116 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~ 116 (214)
|+++|.| +|.||.++|..|.+.|.+|.++.|++
T Consensus 26 ~~~viiG-~G~iglE~A~~~~~~G~~Vtvi~~~~ 58 (123)
T d1dxla2 26 KKLVVIG-AGYIGLEMGSVWGRIGSEVTVVEFAS 58 (123)
T ss_dssp SEEEESC-CSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CeEEEEc-cchHHHHHHHHHHhcCCeEEEEEEcc
Confidence 7899999 79999999999999999999998864
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=94.69 E-value=0.044 Score=40.15 Aligned_cols=40 Identities=23% Similarity=0.109 Sum_probs=35.0
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhH
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK 118 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~ 118 (214)
..+.+|++.|.| .|.||+++++.+...|.+|+..++....
T Consensus 40 ~~l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~ 79 (184)
T d1ygya1 40 TEIFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSP 79 (184)
T ss_dssp CCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCH
T ss_pred ccccceeeeecc-ccchhHHHHHHhhhccceEEeecCCCCh
Confidence 456789999999 8999999999999999999999986543
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=94.66 E-value=0.078 Score=36.90 Aligned_cols=72 Identities=19% Similarity=0.183 Sum_probs=46.7
Q ss_pred EEEEEcCchHHHHHHHHHHHH-CCCeEEEE-EcChhHHHHHhcccCCCCEEEEEecCCChhccchhh----hCCCcEEEe
Q 028043 84 LVLVAGGSGGVGQLVVASLLS-RNIKSRLL-LRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI----FEGVTHVIC 157 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~-~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~----~~~~d~li~ 157 (214)
+|.|.|++|.+|+.+++.+.+ .++++... ++.. ....... .+.. +..|++.++.+.+.+ -.++-+|+=
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~-~~~~~~~----~~~D-vvIDFS~p~~~~~~~~~~~~~~~~~ViG 74 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGD-PLSLLTD----GNTE-VVIDFTHPDVVMGNLEFLIDNGIHAVVG 74 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTC-CTHHHHT----TTCS-EEEECCCTTTHHHHHHHHHHTTCEEEEC
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCC-chhhhcc----ccCC-EEEEcccHHHHHHHHHHHHhcCCCEEEe
Confidence 589999999999999998776 56776654 4432 2222221 1122 568999998876532 236777774
Q ss_pred ccCC
Q 028043 158 CTGT 161 (214)
Q Consensus 158 ~Ag~ 161 (214)
.-|.
T Consensus 75 TTG~ 78 (135)
T d1yl7a1 75 TTGF 78 (135)
T ss_dssp CCCC
T ss_pred cccc
Confidence 4444
|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glycine oxidase ThiO species: Bacillus sp. [TaxId: 1409]
Probab=94.66 E-value=0.014 Score=44.80 Aligned_cols=31 Identities=23% Similarity=0.338 Sum_probs=28.6
Q ss_pred EEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh
Q 028043 85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP 116 (214)
Q Consensus 85 vlITGasggIG~~la~~L~~~G~~V~~~~r~~ 116 (214)
|+|.| +|-+|..+|.+|+++|.+|++++++.
T Consensus 7 vvIIG-aGi~Gls~A~~La~~G~~V~vlE~~~ 37 (276)
T d1ryia1 7 AVVIG-GGIIGSAIAYYLAKENKNTALFESGT 37 (276)
T ss_dssp EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 88998 79999999999999999999999864
|
| >d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Salmonella typhimurium [TaxId: 90371]
Probab=94.56 E-value=0.017 Score=42.17 Aligned_cols=31 Identities=23% Similarity=0.265 Sum_probs=26.2
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHC-CCeEEEE
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSR-NIKSRLL 112 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~-G~~V~~~ 112 (214)
|++|.|.||||..|+++.+.|.++ ..++..+
T Consensus 1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l 32 (179)
T d2g17a1 1 MLNTLIVGASGYAGAELVSYVNRHPHMTITAL 32 (179)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEE
T ss_pred CcEEEEECcccHHHHHHHHHHHhCCCCceEee
Confidence 568999999999999999999987 5566544
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=94.45 E-value=0.018 Score=39.58 Aligned_cols=34 Identities=12% Similarity=0.091 Sum_probs=30.7
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP 116 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~ 116 (214)
.++++|.| +|.||.++|..|.+.|.+|+++.+.+
T Consensus 26 p~~vvIiG-gG~IG~E~A~~~~~~G~~Vtive~~~ 59 (125)
T d1ojta2 26 PGKLLIIG-GGIIGLEMGTVYSTLGSRLDVVEMMD 59 (125)
T ss_dssp CSEEEEES-CSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCeEEEEC-CCHHHHHHHHHhhcCCCEEEEEEeec
Confidence 37899999 79999999999999999999998754
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=94.43 E-value=0.024 Score=42.81 Aligned_cols=36 Identities=17% Similarity=0.259 Sum_probs=31.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChh
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE 117 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~ 117 (214)
..++|+|.| +|--|..+|..|+++|++|+++.|+++
T Consensus 3 ~~~kV~IiG-aG~aGl~~A~~L~~~G~~v~v~Er~~~ 38 (265)
T d2voua1 3 TTDRIAVVG-GSISGLTAALMLRDAGVDVDVYERSPQ 38 (265)
T ss_dssp CCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCCcEEEEC-cCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 346899999 689999999999999999999998653
|
| >d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: Amyloid beta precursor protein-binding protein 1, APPBP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.42 E-value=0.035 Score=47.53 Aligned_cols=34 Identities=15% Similarity=0.194 Sum_probs=28.8
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRD 115 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~ 115 (214)
...+|+|.|+ ||+|.++++.|+..|. +++++|.+
T Consensus 24 ~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d 58 (529)
T d1yova1 24 ESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGN 58 (529)
T ss_dssp HHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCS
T ss_pred hCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCC
Confidence 3468999995 8899999999999997 58888764
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=94.33 E-value=0.022 Score=40.32 Aligned_cols=35 Identities=17% Similarity=0.249 Sum_probs=30.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC--eEEEEEcCh
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI--KSRLLLRDP 116 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~ 116 (214)
.||+|+|.| +|.+|..+|..|.+.|. +|+++.+++
T Consensus 1 ~gkrivIvG-gG~~G~e~A~~l~~~~~~~~Vtlie~~~ 37 (186)
T d1fcda1 1 AGRKVVVVG-GGTGGATAAKYIKLADPSIEVTLIEPNT 37 (186)
T ss_dssp CCCEEEEEC-CSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CCCcEEEEC-ccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence 379999999 79999999999999875 688887764
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=94.31 E-value=0.014 Score=41.68 Aligned_cols=25 Identities=28% Similarity=0.449 Sum_probs=22.3
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNI 107 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~ 107 (214)
=+|.|.||||.+|.++++.|.++.+
T Consensus 2 ~kVaIvGATGyvG~eLirlL~~H~f 26 (154)
T d2gz1a1 2 YTVAVVGATGAVGAQMIKMLEESTL 26 (154)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCCS
T ss_pred CEEEEECCCcHHHHHHHHHHHcCCC
Confidence 3799999999999999999988764
|
| >d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical methyltransferase PH1305 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=94.20 E-value=0.096 Score=39.30 Aligned_cols=71 Identities=15% Similarity=0.060 Sum_probs=50.4
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhhhCCCcEEEecc
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~A 159 (214)
.++||=.|++.| .++..|++.|++|++++.+++-++...+... +.+++++.+|+.+.+ . -+..|.|+..-
T Consensus 42 ~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~l~-~----~~~fD~I~~~~ 113 (251)
T d1wzna1 42 VRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIA-F----KNEFDAVTMFF 113 (251)
T ss_dssp CCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCC-C----CSCEEEEEECS
T ss_pred CCEEEEeCCCCC---ccchhhcccceEEEEEeeccccccccccccccccccchheehhhhhcc-c----ccccchHhhhh
Confidence 478999997765 4466788899999999999877665444322 446888999986643 1 13579888754
Q ss_pred C
Q 028043 160 G 160 (214)
Q Consensus 160 g 160 (214)
+
T Consensus 114 ~ 114 (251)
T d1wzna1 114 S 114 (251)
T ss_dssp S
T ss_pred h
Confidence 3
|
| >d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, C-terminal domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=94.19 E-value=0.038 Score=38.94 Aligned_cols=36 Identities=8% Similarity=0.001 Sum_probs=29.4
Q ss_pred CCEEEEE-cCchHHHHHHHHHHHHCCCeEEEEEcChh
Q 028043 82 SKLVLVA-GGSGGVGQLVVASLLSRNIKSRLLLRDPE 117 (214)
Q Consensus 82 ~k~vlIT-GasggIG~~la~~L~~~G~~V~~~~r~~~ 117 (214)
++.++|. .++|+||.++|..|++.|++|.++.+.+.
T Consensus 39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~ 75 (156)
T d1djqa2 39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL 75 (156)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence 3455554 45699999999999999999999998753
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=93.86 E-value=0.026 Score=43.56 Aligned_cols=35 Identities=20% Similarity=0.243 Sum_probs=31.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP 116 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~ 116 (214)
+.|+|+|.| +|-.|...|..|+++|++|+++.+++
T Consensus 29 ~pkkV~IIG-aG~aGLsaA~~L~~~G~~V~vlE~~~ 63 (370)
T d2iida1 29 NPKHVVIVG-AGMAGLSAAYVLAGAGHQVTVLEASE 63 (370)
T ss_dssp SCCEEEEEC-CBHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCCeEEEEC-CCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 347999999 68889999999999999999998764
|
| >d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, middle domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=93.66 E-value=0.055 Score=40.67 Aligned_cols=36 Identities=19% Similarity=0.264 Sum_probs=32.3
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP 116 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~ 116 (214)
...|+|+|.| +|-.|...|.+|+++|++|+++.+++
T Consensus 47 ~~~k~VvIIG-aGpAGl~aA~~l~~~G~~v~l~E~~~ 82 (233)
T d1djqa3 47 KNKDSVLIVG-AGPSGSEAARVLMESGYTVHLTDTAE 82 (233)
T ss_dssp SSCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred cCCceEEEEc-ccHHHHHHHHHHHHhccceeeEeecc
Confidence 4678999999 78999999999999999999998764
|
| >d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Myxococcus xanthus [TaxId: 34]
Probab=93.57 E-value=0.028 Score=42.46 Aligned_cols=33 Identities=33% Similarity=0.301 Sum_probs=29.0
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP 116 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~ 116 (214)
|+|+|.| +|--|...|.+|+++|++|+++.+++
T Consensus 1 m~V~IIG-aG~aGL~aA~~L~~~G~~V~vlE~~~ 33 (347)
T d2ivda1 1 MNVAVVG-GGISGLAVAHHLRSRGTDAVLLESSA 33 (347)
T ss_dssp CCEEEEC-CBHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred CeEEEEC-CCHHHHHHHHHHHhCCCCEEEEecCC
Confidence 4699999 48899999999999999999998753
|
| >d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical protein PH0226 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=93.39 E-value=0.15 Score=37.26 Aligned_cols=73 Identities=14% Similarity=0.009 Sum_probs=51.0
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
.+||=.|++.|. ++..|++.|++|++++.+++.++..++... +..+..+.+|..+.. .. -+..|+|+....
T Consensus 39 ~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~~l~-~~---~~~fD~I~~~~~ 111 (226)
T d1ve3a1 39 GKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLS-FE---DKTFDYVIFIDS 111 (226)
T ss_dssp CEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCC-SC---TTCEEEEEEESC
T ss_pred CEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhcccccccccccccccccc-cc---CcCceEEEEecc
Confidence 579999987765 567788899999999999887655443221 345677788887643 11 246899988765
Q ss_pred CC
Q 028043 161 TT 162 (214)
Q Consensus 161 ~~ 162 (214)
..
T Consensus 112 l~ 113 (226)
T d1ve3a1 112 IV 113 (226)
T ss_dssp GG
T ss_pred hh
Confidence 44
|
| >d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GDI-like N domain domain: Guanine nucleotide dissociation inhibitor, GDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=93.39 E-value=0.036 Score=40.47 Aligned_cols=31 Identities=19% Similarity=0.175 Sum_probs=28.4
Q ss_pred EEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh
Q 028043 85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP 116 (214)
Q Consensus 85 vlITGasggIG~~la~~L~~~G~~V~~~~r~~ 116 (214)
|+|.| +|--|...|..|+++|++|.++.+++
T Consensus 8 viViG-aG~~Gl~~A~~La~~G~~V~vlE~~~ 38 (297)
T d2bcgg1 8 VIVLG-TGITECILSGLLSVDGKKVLHIDKQD 38 (297)
T ss_dssp EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred EEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 78898 78899999999999999999999864
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=93.38 E-value=0.13 Score=37.54 Aligned_cols=38 Identities=13% Similarity=0.031 Sum_probs=34.1
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP 116 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~ 116 (214)
..+.++++.|.| .|.||+.+++.+...|.+|+..++..
T Consensus 40 ~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~ 77 (188)
T d1sc6a1 40 FEARGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIEN 77 (188)
T ss_dssp CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred ccccceEEEEee-cccchhhhhhhcccccceEeeccccc
Confidence 357889999998 89999999999999999999998754
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=93.36 E-value=0.079 Score=37.62 Aligned_cols=46 Identities=11% Similarity=0.199 Sum_probs=34.2
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHC--CCeEEEEE--cChhHHHHHhcccC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSR--NIKSRLLL--RDPEKATTLFGKQD 127 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~--G~~V~~~~--r~~~~~~~~~~~~~ 127 (214)
||+|.|.|+||.||.....-+.+. .++|.++. ++-+.+.+...++.
T Consensus 1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f~ 50 (151)
T d1q0qa2 1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFS 50 (151)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHHC
T ss_pred CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHHh
Confidence 578999999999999998887775 46777653 45566666555553
|
| >d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: MraW-like putative methyltransferases domain: TM0872, methyltransferase domain species: Thermotoga maritima [TaxId: 2336]
Probab=93.33 E-value=0.058 Score=39.83 Aligned_cols=79 Identities=15% Similarity=0.142 Sum_probs=58.5
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhh-hCCCcEEEecc
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAI-FEGVTHVICCT 159 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~-~~~~d~li~~A 159 (214)
..+=+|-|+||.-.++.+.+ . +.+|+++|++++.++...+.+. ..++.++.++..+.+.+.... .+.+|.++.-.
T Consensus 26 ~~lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~~~~~~~~~~~~~~vdgIl~Dl 103 (192)
T d1m6ya2 26 IILDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKTLGIEKVDGILMDL 103 (192)
T ss_dssp EEEETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHHTTCSCEEEEEEEC
T ss_pred EEEEecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccccccccchhHHHhhHHHHHHHcCCCCcceeeecc
Confidence 34556788889988888876 3 5789999999988766544332 457899999998766554321 35799999999
Q ss_pred CCCC
Q 028043 160 GTTA 163 (214)
Q Consensus 160 g~~~ 163 (214)
|++.
T Consensus 104 GvSs 107 (192)
T d1m6ya2 104 GVST 107 (192)
T ss_dssp SCCH
T ss_pred chhH
Confidence 9864
|
| >d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ta1320-like domain: Hypothetical protein Ta1320 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=93.21 E-value=0.12 Score=38.34 Aligned_cols=72 Identities=13% Similarity=0.040 Sum_probs=50.7
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEE
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVI 156 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li 156 (214)
.++.||+|+=.|++.|+ ++..++..|+ +|++++.+++..+...+.. .++.++.+|+.+. -++.|+||
T Consensus 45 ~dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N~--~~~~~~~~D~~~l-------~~~fD~Vi 112 (197)
T d1ne2a_ 45 GNIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRNC--GGVNFMVADVSEI-------SGKYDTWI 112 (197)
T ss_dssp TSSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHHC--TTSEEEECCGGGC-------CCCEEEEE
T ss_pred CCCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHcc--ccccEEEEehhhc-------CCcceEEE
Confidence 34678999999976653 2344666776 5999999998776654433 3577888888542 24689999
Q ss_pred eccCC
Q 028043 157 CCTGT 161 (214)
Q Consensus 157 ~~Ag~ 161 (214)
.|--.
T Consensus 113 ~NPPf 117 (197)
T d1ne2a_ 113 MNPPF 117 (197)
T ss_dssp ECCCC
T ss_pred eCccc
Confidence 88654
|
| >d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 3, PRMT3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.18 E-value=0.22 Score=38.92 Aligned_cols=72 Identities=18% Similarity=0.099 Sum_probs=48.2
Q ss_pred CCCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHH---HhcccCCCCEEEEEecCCChhccchhhhCCCcEE
Q 028043 80 SSSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATT---LFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHV 155 (214)
Q Consensus 80 ~~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~---~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~l 155 (214)
.++|+||-.|++.|+ ++..+++.|+ +|++++.++..... ..+.....++.++.+|+.+...- ....|+|
T Consensus 34 ~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~~~~~l~~~----~~~~D~I 106 (311)
T d2fyta1 34 FKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHLP----VEKVDVI 106 (311)
T ss_dssp TTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCS----CSCEEEE
T ss_pred CCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHHHHHHHHHHHhCCCccceEEEeeHHHhcCc----cccceEE
Confidence 467899999977665 4556677886 69999988753321 11111245788899998775422 2468999
Q ss_pred Eec
Q 028043 156 ICC 158 (214)
Q Consensus 156 i~~ 158 (214)
+..
T Consensus 107 vse 109 (311)
T d2fyta1 107 ISE 109 (311)
T ss_dssp EEC
T ss_pred EEe
Confidence 864
|
| >d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein BH2331 species: Bacillus halodurans [TaxId: 86665]
Probab=93.12 E-value=0.26 Score=36.28 Aligned_cols=75 Identities=13% Similarity=0.096 Sum_probs=52.3
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhc---ccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFG---KQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
+++||=.|++.|+- +..|++.|++|++++.+++-.+...+ .....+++++.+|..+.. +. -+..|+|+.+
T Consensus 16 ~~rVLDiGcG~G~~---~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~l~-~~---~~~fD~v~~~ 88 (231)
T d1vl5a_ 16 NEEVLDVATGGGHV---ANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMP-FT---DERFHIVTCR 88 (231)
T ss_dssp CCEEEEETCTTCHH---HHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCC-SC---TTCEEEEEEE
T ss_pred cCEEEEecccCcHH---HHHHHHhCCEEEEEECCHHHHhhhhhccccccccccccccccccccc-cc---cccccccccc
Confidence 57899999776644 35677889999999999876554322 233467899999987653 22 2468999888
Q ss_pred cCCCC
Q 028043 159 TGTTA 163 (214)
Q Consensus 159 Ag~~~ 163 (214)
....+
T Consensus 89 ~~l~~ 93 (231)
T d1vl5a_ 89 IAAHH 93 (231)
T ss_dssp SCGGG
T ss_pred ccccc
Confidence 76654
|
| >d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=92.95 E-value=0.045 Score=41.80 Aligned_cols=34 Identities=24% Similarity=0.221 Sum_probs=29.7
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHH-CCCeEEEEE
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLS-RNIKSRLLL 113 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~-~G~~V~~~~ 113 (214)
++++++|+|-| .|-+|+++++.|.+ .|++|+.++
T Consensus 28 ~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs 62 (234)
T d1b26a1 28 DPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVS 62 (234)
T ss_dssp CTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred CcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence 46789999998 99999999999975 699988775
|
| >d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Putative methyltransferase CAC2371 species: Clostridium acetobutylicum [TaxId: 1488]
Probab=92.88 E-value=0.057 Score=40.78 Aligned_cols=73 Identities=12% Similarity=0.040 Sum_probs=53.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhccc--CCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
.+++||=.|++.|. ++..|+++|.+|++++.+++-++...+.. .+.+++++.+|+.+.+. -+..|+|+..
T Consensus 37 ~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d~~~~~~-----~~~fD~i~~~ 108 (246)
T d1y8ca_ 37 VFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNI-----NRKFDLITCC 108 (246)
T ss_dssp CTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCC-----SCCEEEEEEC
T ss_pred CCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhccccccccCccceeeccchhhhcc-----ccccccccee
Confidence 45789999987764 77788899999999999998766543322 24468888888876431 2468999876
Q ss_pred cCC
Q 028043 159 TGT 161 (214)
Q Consensus 159 Ag~ 161 (214)
.+.
T Consensus 109 ~~~ 111 (246)
T d1y8ca_ 109 LDS 111 (246)
T ss_dssp TTG
T ss_pred eee
Confidence 543
|
| >d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Thermotoga maritima [TaxId: 2336]
Probab=92.85 E-value=0.14 Score=38.10 Aligned_cols=78 Identities=14% Similarity=0.099 Sum_probs=51.2
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhccc---CCCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ---DEETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
.|.+||-.|++.|--.++..++...+.+|+.++.+++..+...+.+ .-.++.++.+|..+. .. ..+..|.++.
T Consensus 75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~--~~--~~~~fD~I~~ 150 (213)
T d1dl5a1 75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYG--VP--EFSPYDVIFV 150 (213)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC--CG--GGCCEEEEEE
T ss_pred ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHHc--cc--cccchhhhhh
Confidence 4679999987766555555555566778999999987765543322 234667777775431 11 1246899998
Q ss_pred ccCCC
Q 028043 158 CTGTT 162 (214)
Q Consensus 158 ~Ag~~ 162 (214)
+++..
T Consensus 151 ~~~~~ 155 (213)
T d1dl5a1 151 TVGVD 155 (213)
T ss_dssp CSBBS
T ss_pred hccHH
Confidence 88754
|
| >d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Phosphopantothenoylcysteine synthetase species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.73 E-value=0.17 Score=39.65 Aligned_cols=25 Identities=24% Similarity=0.313 Sum_probs=22.6
Q ss_pred chHHHHHHHHHHHHCCCeEEEEEcC
Q 028043 91 SGGVGQLVVASLLSRNIKSRLLLRD 115 (214)
Q Consensus 91 sggIG~~la~~L~~~G~~V~~~~r~ 115 (214)
||..|.++|++++.+|++|+++.+.
T Consensus 45 SGk~G~alA~~~~~~Ga~V~li~g~ 69 (290)
T d1p9oa_ 45 SGRRGATSAEAFLAAGYGVLFLYRA 69 (290)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred chHHHHHHHHHHHHcCCEEEEEecC
Confidence 4889999999999999999998754
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=92.73 E-value=0.11 Score=36.82 Aligned_cols=46 Identities=15% Similarity=0.260 Sum_probs=34.2
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHC--CCeEEEEE--cChhHHHHHhcccC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSR--NIKSRLLL--RDPEKATTLFGKQD 127 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~--G~~V~~~~--r~~~~~~~~~~~~~ 127 (214)
.|+|.|.|+||.||.....-+.+. .++|+++. ++-+.+.+...++.
T Consensus 2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~ef~ 51 (150)
T d1r0ka2 2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTN 51 (150)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHTT
T ss_pred CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHHhhc
Confidence 389999999999999998888764 57777764 45566666555553
|
| >d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Arsenite-translocating ATPase ArsA species: Escherichia coli [TaxId: 562]
Probab=92.60 E-value=0.04 Score=42.35 Aligned_cols=37 Identities=24% Similarity=0.411 Sum_probs=31.3
Q ss_pred CCCEEEEEcCchHHHHHH-----HHHHHHCCCeEEEEEcChh
Q 028043 81 SSKLVLVAGGSGGVGQLV-----VASLLSRNIKSRLLLRDPE 117 (214)
Q Consensus 81 ~~k~vlITGasggIG~~l-----a~~L~~~G~~V~~~~r~~~ 117 (214)
.+++|+|+.|-||+|+.. +..|+++|++|.+++-++.
T Consensus 18 ~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~ 59 (279)
T d1ihua2 18 NEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA 59 (279)
T ss_dssp TSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 356788887799999875 7899999999999999864
|
| >d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Clostridium symbiosum [TaxId: 1512]
Probab=92.51 E-value=0.065 Score=41.44 Aligned_cols=36 Identities=25% Similarity=0.144 Sum_probs=31.7
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEc
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLR 114 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r 114 (214)
.++++|+|+|.| .|.+|+++++.|.+.|++|+.+..
T Consensus 32 ~~l~g~~v~IQG-fGnVG~~~a~~L~e~GakvvavsD 67 (255)
T d1bgva1 32 DTLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLSG 67 (255)
T ss_dssp CCSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEEE
T ss_pred CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEec
Confidence 346889999999 799999999999999999887753
|
| >d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=92.49 E-value=0.055 Score=38.53 Aligned_cols=34 Identities=21% Similarity=0.277 Sum_probs=28.1
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD 115 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~ 115 (214)
.+++|+|.| +|.+|.+++..|.+.|++|.++.+.
T Consensus 2 ~~~~VvIIG-gG~~G~e~A~~l~~~g~~v~v~~~~ 35 (185)
T d1q1ra1 2 ANDNVVIVG-TGLAGVEVAFGLRASGWEGNIRLVG 35 (185)
T ss_dssp CSCEEEEEC-CSHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred CCCCEEEEC-CcHHHHHHHHHHHHcCCceEEEEec
Confidence 357899998 7999999999999999986665443
|
| >d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Sarcosine oxidase species: Bacillus sp., strain b0618 [TaxId: 1409]
Probab=92.46 E-value=0.055 Score=41.37 Aligned_cols=30 Identities=27% Similarity=0.360 Sum_probs=27.6
Q ss_pred EEEEcCchHHHHHHHHHHHHCCCeEEEEEcC
Q 028043 85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRD 115 (214)
Q Consensus 85 vlITGasggIG~~la~~L~~~G~~V~~~~r~ 115 (214)
|+|.| +|-.|..+|.+|+++|++|+++.+.
T Consensus 6 vvIIG-aGi~Gls~A~~La~~G~~V~viE~~ 35 (281)
T d2gf3a1 6 VIVVG-AGSMGMAAGYQLAKQGVKTLLVDAF 35 (281)
T ss_dssp EEEEC-CSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCC
Confidence 78888 6899999999999999999999875
|
| >d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Cell division regulator MinD species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=92.45 E-value=0.045 Score=40.69 Aligned_cols=35 Identities=23% Similarity=0.391 Sum_probs=29.9
Q ss_pred CCCEEEEEcCchHHHHH-----HHHHHHHCCCeEEEEEcC
Q 028043 81 SSKLVLVAGGSGGVGQL-----VVASLLSRNIKSRLLLRD 115 (214)
Q Consensus 81 ~~k~vlITGasggIG~~-----la~~L~~~G~~V~~~~r~ 115 (214)
++|+|.|+|+.||+|+. ++..|+++|.+|.++|-+
T Consensus 1 m~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D 40 (237)
T d1g3qa_ 1 MGRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD 40 (237)
T ss_dssp CCEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence 46889999999999975 667888999999999865
|
| >d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Nitrogenase iron protein species: Clostridium pasteurianum [TaxId: 1501]
Probab=92.35 E-value=0.031 Score=42.95 Aligned_cols=35 Identities=23% Similarity=0.401 Sum_probs=29.5
Q ss_pred CCEEEEEcCchHHHHH-----HHHHHHHCCCeEEEEEcChh
Q 028043 82 SKLVLVAGGSGGVGQL-----VVASLLSRNIKSRLLLRDPE 117 (214)
Q Consensus 82 ~k~vlITGasggIG~~-----la~~L~~~G~~V~~~~r~~~ 117 (214)
||+|.|+| -||+|+. ++..|++.|++|.++|-++.
T Consensus 1 mr~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~q 40 (269)
T d1cp2a_ 1 MRQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK 40 (269)
T ss_dssp CEEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred CCEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCCC
Confidence 57899998 9999975 45688999999999998863
|
| >d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Alpha-glucosidase AglA species: Thermotoga maritima [TaxId: 2336]
Probab=92.33 E-value=0.02 Score=41.66 Aligned_cols=75 Identities=19% Similarity=0.186 Sum_probs=45.0
Q ss_pred CCEEEEEcCchHHHHH--HHHHHHHC----CCeEEEEEcChhHHHHHhcccC------CCCEEEEEecCCChhccchhhh
Q 028043 82 SKLVLVAGGSGGVGQL--VVASLLSR----NIKSRLLLRDPEKATTLFGKQD------EETLQVCKGDTRNPKDLDPAIF 149 (214)
Q Consensus 82 ~k~vlITGasggIG~~--la~~L~~~----G~~V~~~~r~~~~~~~~~~~~~------~~~~~~v~~Di~d~~~v~~~~~ 149 (214)
.++|.|.|| |.+|.. ++..++.. +.++++.|+++++++.....+. .....+.. ..+.++ .+
T Consensus 2 ~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~-----~td~~e-aL 74 (171)
T d1obba1 2 SVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEK-----TMNLDD-VI 74 (171)
T ss_dssp CCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEE-----ESCHHH-HH
T ss_pred CcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEE-----eCChhh-cc
Confidence 368999995 777764 34445432 4689999999987654221110 12222211 122333 35
Q ss_pred CCCcEEEeccCCCC
Q 028043 150 EGVTHVICCTGTTA 163 (214)
Q Consensus 150 ~~~d~li~~Ag~~~ 163 (214)
.+.|+|++.++...
T Consensus 75 ~dad~Vv~~~~~g~ 88 (171)
T d1obba1 75 IDADFVINTAMVGG 88 (171)
T ss_dssp TTCSEEEECCCTTH
T ss_pred cCCCeEeeeccccc
Confidence 78999999988753
|
| >d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM1727 species: Thermotoga maritima [TaxId: 2336]
Probab=92.17 E-value=0.042 Score=38.50 Aligned_cols=39 Identities=21% Similarity=0.278 Sum_probs=28.0
Q ss_pred EEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhccc
Q 028043 87 VAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ 126 (214)
Q Consensus 87 ITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~ 126 (214)
+.| +|.+|+++++.|.+.++.+.+..|++++.+++.+..
T Consensus 4 fIG-~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~ 42 (153)
T d2i76a2 4 FVG-TGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVY 42 (153)
T ss_dssp EES-CCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHT
T ss_pred EEe-CcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhcc
Confidence 445 899999999988664444568899999988876654
|
| >d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Lysine-specific histone demethylase 1, LSD1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.11 E-value=0.1 Score=39.62 Aligned_cols=34 Identities=26% Similarity=0.283 Sum_probs=29.4
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP 116 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~ 116 (214)
.++|+|.| +|--|...|.+|+++|++|+++-.+.
T Consensus 5 ~~kViVIG-aG~aGL~aA~~L~~~G~~V~VlEa~~ 38 (449)
T d2dw4a2 5 TGKVIIIG-SGVSGLAAARQLQSFGMDVTLLEARD 38 (449)
T ss_dssp CCEEEEEC-CBHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCcEEEEC-CCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 36799999 68889999999999999999986643
|
| >d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=92.05 E-value=0.25 Score=36.59 Aligned_cols=76 Identities=13% Similarity=0.066 Sum_probs=53.0
Q ss_pred CCCEEEEEcCchHH-HHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC-CCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 81 SSKLVLVAGGSGGV-GQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 81 ~~k~vlITGasggI-G~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
.|.+||=.|++.|. =.++++. ...| +|++++.++..++.+.+... ..++.++..|..+++.... .+..+|++++.
T Consensus 56 pg~~VLDlGcG~G~~~~~la~~-v~~g-~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~-~~~~vd~v~~~ 132 (209)
T d1nt2a_ 56 GDERVLYLGAASGTTVSHLADI-VDEG-IIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSG-IVEKVDLIYQD 132 (209)
T ss_dssp SSCEEEEETCTTSHHHHHHHHH-TTTS-EEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTT-TCCCEEEEEEC
T ss_pred CCCEEEEeCCcCCHHHHHHHHh-ccCC-eEEEEeCCHHHHHHHHHHhhccCCceEEEeeccCcccccc-ccceEEEEEec
Confidence 46899999976654 3445443 3445 89999999987766543322 3578899999998876654 35678888875
Q ss_pred c
Q 028043 159 T 159 (214)
Q Consensus 159 A 159 (214)
-
T Consensus 133 ~ 133 (209)
T d1nt2a_ 133 I 133 (209)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TehB-like domain: Putative methyltransferase TehB species: Salmonella typhimurium [TaxId: 90371]
Probab=91.97 E-value=0.11 Score=37.81 Aligned_cols=75 Identities=12% Similarity=-0.002 Sum_probs=49.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhccc---CCCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ---DEETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
...+||=.|++ .|+ .+..|+++|++|++++.+++.++.+.+.. .-..+++...|+.+..- -+..|+|+.
T Consensus 30 ~~grvLDiGcG--~G~-~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~~~-----~~~fD~I~~ 101 (198)
T d2i6ga1 30 APGRTLDLGCG--NGR-NSLYLAANGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTLTF-----DGEYDFILS 101 (198)
T ss_dssp CSCEEEEETCT--TSH-HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTCCC-----CCCEEEEEE
T ss_pred CCCcEEEECCC--CCH-HHHHHHHHhhhhccccCcHHHHHHHHHHhhhccccchhhhheecccccc-----cccccEEEE
Confidence 34579999964 444 45677889999999999988776543222 12356777777765431 135799987
Q ss_pred ccCCCC
Q 028043 158 CTGTTA 163 (214)
Q Consensus 158 ~Ag~~~ 163 (214)
+....+
T Consensus 102 ~~~~~~ 107 (198)
T d2i6ga1 102 TVVMMF 107 (198)
T ss_dssp ESCGGG
T ss_pred eeeeec
Confidence 665443
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=91.94 E-value=0.085 Score=41.08 Aligned_cols=33 Identities=30% Similarity=0.466 Sum_probs=23.6
Q ss_pred CEEEEEcC-chHH---HHHHHHHHHHCCCeEEEEEcC
Q 028043 83 KLVLVAGG-SGGV---GQLVVASLLSRNIKSRLLLRD 115 (214)
Q Consensus 83 k~vlITGa-sggI---G~~la~~L~~~G~~V~~~~r~ 115 (214)
|+|+|++| |||- ..+|+++|.++|++|..++..
T Consensus 1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~ 37 (351)
T d1f0ka_ 1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTA 37 (351)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence 56777764 3322 346889999999999887654
|
| >d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain species: Escherichia coli [TaxId: 562]
Probab=91.88 E-value=0.064 Score=33.72 Aligned_cols=36 Identities=25% Similarity=0.225 Sum_probs=31.9
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhH
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEK 118 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~ 118 (214)
+|+|.|.| +|-+|+-++.+-.+.|+++++++-+++.
T Consensus 1 ~k~vgIlG-~GQLgrMl~~Aa~~LG~~v~vldp~~~~ 36 (78)
T d3etja2 1 MKQVCVLG-NGQLGRMLRQAGEPLGIAVWPVGLDAEP 36 (78)
T ss_dssp CEEEEEEB-CSHHHHHHHHHHGGGTEEEEEECTTSCG
T ss_pred CCEEEEEc-CCHHHHHHHHHHHHcCCEEEEEcCCCCC
Confidence 47899999 7999999999999999999999976644
|
| >d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: p-Hydroxybenzoate hydroxylase, PHBH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=91.86 E-value=0.054 Score=41.64 Aligned_cols=33 Identities=27% Similarity=0.349 Sum_probs=29.7
Q ss_pred EEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChh
Q 028043 84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE 117 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~ 117 (214)
.|+|.| +|-.|..+|..|.+.|++|.++.++++
T Consensus 4 ~V~IvG-aGp~Gl~~A~~L~~~G~~v~vlE~~~~ 36 (292)
T d1k0ia1 4 QVAIIG-AGPSGLLLGQLLHKAGIDNVILERQTP 36 (292)
T ss_dssp SEEEEC-CSHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred CEEEEC-cCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 599999 469999999999999999999999764
|
| >d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.80 E-value=0.32 Score=36.40 Aligned_cols=79 Identities=13% Similarity=0.045 Sum_probs=55.8
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhccc--------CCCCEEEEEecCCChhccchhhhCCC
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--------DEETLQVCKGDTRNPKDLDPAIFEGV 152 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~--------~~~~~~~v~~Di~d~~~v~~~~~~~~ 152 (214)
.|.+||-.|+++|--.++.-++.....+|+.++++++-.+...+.+ ...++.++.+|..+. ... .+..
T Consensus 76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~--~~~--~~~f 151 (224)
T d1i1na_ 76 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMG--YAE--EAPY 151 (224)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGC--CGG--GCCE
T ss_pred CCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeecccc--cch--hhhh
Confidence 4679999998888777777778888889999999987665433221 124577777887532 111 2468
Q ss_pred cEEEeccCCCC
Q 028043 153 THVICCTGTTA 163 (214)
Q Consensus 153 d~li~~Ag~~~ 163 (214)
|.++.+++...
T Consensus 152 D~I~~~~~~~~ 162 (224)
T d1i1na_ 152 DAIHVGAAAPV 162 (224)
T ss_dssp EEEEECSBBSS
T ss_pred hhhhhhcchhh
Confidence 99999887653
|
| >d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Maltose-6'-phosphate glucosidase GlvA species: Bacillus subtilis [TaxId: 1423]
Probab=91.68 E-value=0.29 Score=35.08 Aligned_cols=75 Identities=21% Similarity=0.264 Sum_probs=43.0
Q ss_pred CCEEEEEcCchHHHH-HHHHHHHHC-----CCeEEEEEcChhHHHHHhcccC------CCCEEEEEecCCChhccchhhh
Q 028043 82 SKLVLVAGGSGGVGQ-LVVASLLSR-----NIKSRLLLRDPEKATTLFGKQD------EETLQVCKGDTRNPKDLDPAIF 149 (214)
Q Consensus 82 ~k~vlITGasggIG~-~la~~L~~~-----G~~V~~~~r~~~~~~~~~~~~~------~~~~~~v~~Di~d~~~v~~~~~ 149 (214)
..+|.|.||++ +|. .++..++.. +.+|++.|.++++++.....+. ......... +| .++ .+
T Consensus 3 ~~KI~iIGaGs-v~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d---~~e-al 75 (167)
T d1u8xx1 3 SFSIVIAGGGS-TFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT--TD---PEE-AF 75 (167)
T ss_dssp CEEEEEECTTS-SSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE--SC---HHH-HH
T ss_pred CceEEEECCCh-hhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEec--CC---hhh-cc
Confidence 35788889754 443 344444432 2479999999988764322111 222222211 12 222 25
Q ss_pred CCCcEEEeccCCCC
Q 028043 150 EGVTHVICCTGTTA 163 (214)
Q Consensus 150 ~~~d~li~~Ag~~~ 163 (214)
.+.|+||+.||...
T Consensus 76 ~~AD~Vvitag~~~ 89 (167)
T d1u8xx1 76 TDVDFVMAHIRVGK 89 (167)
T ss_dssp SSCSEEEECCCTTH
T ss_pred CCCCEEEECCCcCC
Confidence 78999999999854
|
| >d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=91.62 E-value=0.3 Score=36.46 Aligned_cols=77 Identities=16% Similarity=0.244 Sum_probs=52.7
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHH---hcccCCCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTL---FGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~---~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
.+.+||..|+++|--.++.-.++ |.+|+.+.++++-.+.. .+...-.++.++.+|..+- ... .+..|.++-
T Consensus 78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g--~~~--~~pfD~Iiv 151 (215)
T d1jg1a_ 78 PGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKG--FPP--KAPYDVIIV 151 (215)
T ss_dssp TTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC--CGG--GCCEEEEEE
T ss_pred ccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcCCceeEEEECccccC--Ccc--cCcceeEEe
Confidence 45689999977666666666665 56799999997654443 3333456789999998642 221 357899998
Q ss_pred ccCCCC
Q 028043 158 CTGTTA 163 (214)
Q Consensus 158 ~Ag~~~ 163 (214)
.++...
T Consensus 152 ~~a~~~ 157 (215)
T d1jg1a_ 152 TAGAPK 157 (215)
T ss_dssp CSBBSS
T ss_pred eccccc
Confidence 888654
|
| >d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: N,N-dimethylglycine oxidase species: Arthrobacter globiformis [TaxId: 1665]
Probab=91.60 E-value=0.079 Score=40.96 Aligned_cols=32 Identities=25% Similarity=0.459 Sum_probs=28.0
Q ss_pred EEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcCh
Q 028043 84 LVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDP 116 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~ 116 (214)
.|+|.| +|-+|..+|..|+++|. +|++++|+.
T Consensus 3 dViIIG-aGi~G~s~A~~La~~G~~~V~liE~~~ 35 (305)
T d1pj5a2 3 RIVIIG-AGIVGTNLADELVTRGWNNITVLDQGP 35 (305)
T ss_dssp CEEEEC-CSHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred CEEEEC-cCHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 488888 68999999999999996 699998863
|
| >d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Cell division regulator MinD species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=91.55 E-value=0.046 Score=40.63 Aligned_cols=35 Identities=23% Similarity=0.337 Sum_probs=29.9
Q ss_pred CCEEEEEcCchHHHHH-----HHHHHHHCCCeEEEEEcCh
Q 028043 82 SKLVLVAGGSGGVGQL-----VVASLLSRNIKSRLLLRDP 116 (214)
Q Consensus 82 ~k~vlITGasggIG~~-----la~~L~~~G~~V~~~~r~~ 116 (214)
+|+|.|+++-||+|+. +|..|+++|.+|.+++-++
T Consensus 1 ~kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~ 40 (232)
T d1hyqa_ 1 VRTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADI 40 (232)
T ss_dssp CEEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CEEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 5789999999999974 6678889999999998764
|
| >d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Sulfolobus tokodaii [TaxId: 111955]
Probab=91.35 E-value=0.55 Score=35.15 Aligned_cols=75 Identities=11% Similarity=-0.025 Sum_probs=50.3
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC-CCCEEEEEecCCChhccchhhhCCCcEEEecc
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~A 159 (214)
.+.+||-.|++.|--.+ .|++.+.+|+.++++++..+...+... ..++.++.+|..+ .... .++.|.++.++
T Consensus 70 ~g~~VLdIG~GsGy~ta---~La~l~~~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~d~~~--g~~~--~~pfD~Iiv~~ 142 (224)
T d1vbfa_ 70 KGQKVLEIGTGIGYYTA---LIAEIVDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTL--GYEE--EKPYDRVVVWA 142 (224)
T ss_dssp TTCEEEEECCTTSHHHH---HHHHHSSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGG--CCGG--GCCEEEEEESS
T ss_pred ccceEEEecCCCCHHHH---HHHHHhcccccccccHHHHHHHHHHHhcccccccccCchhh--cchh--hhhHHHHHhhc
Confidence 46789999976664333 455557889999999877655433322 4578888888753 1222 34689999888
Q ss_pred CCC
Q 028043 160 GTT 162 (214)
Q Consensus 160 g~~ 162 (214)
+..
T Consensus 143 a~~ 145 (224)
T d1vbfa_ 143 TAP 145 (224)
T ss_dssp BBS
T ss_pred chh
Confidence 754
|
| >d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ta1320-like domain: Hypothetical protein PH1948 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=91.31 E-value=0.49 Score=34.64 Aligned_cols=74 Identities=19% Similarity=0.110 Sum_probs=49.6
Q ss_pred CCCCCCEEEEEcCc-hHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhcccC--CCCEEEEEecCCChhccchhhhCCCc
Q 028043 78 PASSSKLVLVAGGS-GGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQD--EETLQVCKGDTRNPKDLDPAIFEGVT 153 (214)
Q Consensus 78 ~~~~~k~vlITGas-ggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Di~d~~~v~~~~~~~~d 153 (214)
.++.|++||=.|++ |.+|. .++.+|+ +|++++.++..++...+.+. +....++.+|+.+. -++.|
T Consensus 43 ~dl~g~~vLDlg~GtG~l~i----~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~~~~~~~~~~d~~~~-------~~~fD 111 (201)
T d1wy7a1 43 GDIEGKVVADLGAGTGVLSY----GALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEF-------NSRVD 111 (201)
T ss_dssp TSSTTCEEEEETCTTCHHHH----HHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGC-------CCCCS
T ss_pred CCCCCCEEEECcCcchHHHH----HHHHcCCCEEEEEcCcHHHHHHHHHHHHHcCCCceEEECchhhh-------CCcCc
Confidence 44678999988855 44543 3446775 79999999987665543222 34567777776432 34689
Q ss_pred EEEeccCCC
Q 028043 154 HVICCTGTT 162 (214)
Q Consensus 154 ~li~~Ag~~ 162 (214)
+||.|.-+.
T Consensus 112 ~Vi~nPP~~ 120 (201)
T d1wy7a1 112 IVIMNPPFG 120 (201)
T ss_dssp EEEECCCCS
T ss_pred EEEEcCccc
Confidence 999888653
|
| >d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Dethiobiotin synthetase species: Escherichia coli [TaxId: 562]
Probab=91.08 E-value=0.05 Score=39.82 Aligned_cols=31 Identities=16% Similarity=0.203 Sum_probs=26.8
Q ss_pred CEEEEEcCchHHHHH-----HHHHHHHCCCeEEEEE
Q 028043 83 KLVLVAGGSGGVGQL-----VVASLLSRNIKSRLLL 113 (214)
Q Consensus 83 k~vlITGasggIG~~-----la~~L~~~G~~V~~~~ 113 (214)
|+++|||-+.|+|+- |++.|+++|++|.+++
T Consensus 2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id 37 (224)
T d1byia_ 2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK 37 (224)
T ss_dssp EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence 789999976699974 6789999999999986
|
| >d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=90.89 E-value=0.084 Score=41.26 Aligned_cols=34 Identities=21% Similarity=0.230 Sum_probs=29.9
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChh
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE 117 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~ 117 (214)
..|+|.| +|--|..+|++|++.|++|.++.++..
T Consensus 2 ~dv~IIG-aG~sGl~~A~~L~~~g~~V~iiEk~~~ 35 (298)
T d1i8ta1 2 YDYIIVG-SGLFGAVCANELKKLNKKVLVIEKRNH 35 (298)
T ss_dssp EEEEEEC-CSHHHHHHHHHHGGGTCCEEEECSSSS
T ss_pred ccEEEEC-CcHHHHHHHHHHHhCCCcEEEEECCCC
Confidence 4689999 799999999999999999999987653
|
| >d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=90.71 E-value=0.39 Score=32.81 Aligned_cols=75 Identities=15% Similarity=0.071 Sum_probs=50.5
Q ss_pred CCCEEEEEcCc----------hHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh-h
Q 028043 81 SSKLVLVAGGS----------GGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-F 149 (214)
Q Consensus 81 ~~k~vlITGas----------ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~-~ 149 (214)
..|+|+|.|++ -.-+.+.+++|.+.|++++++.-|++....-.+. ..+ +...--..+.+.+.+ .
T Consensus 6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d~--aD~---lYfePlt~e~v~~Ii~~ 80 (127)
T d1a9xa3 6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPEM--ADA---TYIEPIHWEVVRKIIEK 80 (127)
T ss_dssp SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGGG--SSE---EECSCCCHHHHHHHHHH
T ss_pred CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChhh--cce---eeeecCCHHHHHHHHHH
Confidence 35899999984 4678899999999999999999998765331111 112 223334455565522 3
Q ss_pred CCCcEEEeccC
Q 028043 150 EGVTHVICCTG 160 (214)
Q Consensus 150 ~~~d~li~~Ag 160 (214)
.++|.++--.|
T Consensus 81 E~pd~il~~~G 91 (127)
T d1a9xa3 81 ERPDAVLPTMG 91 (127)
T ss_dssp HCCSEEECSSS
T ss_pred hCcCCeEEEee
Confidence 58999886665
|
| >d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative oxidoreductase VCA1048 species: Vibrio cholerae [TaxId: 666]
Probab=90.42 E-value=0.4 Score=33.73 Aligned_cols=101 Identities=18% Similarity=0.173 Sum_probs=57.3
Q ss_pred CEEEEEcCchHHHHH-HHHHHHHC-CCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 83 KLVLVAGGSGGVGQL-VVASLLSR-NIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 83 k~vlITGasggIG~~-la~~L~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
++|.|.| .|++|+. ....|.+. +.+++++++++++.+.+.+.+.... + .+|.+++-+ .++|+|+-+..
T Consensus 2 irvgiiG-~G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~---~---~~~~~~ll~---~~iD~V~I~tp 71 (167)
T d1xeaa1 2 LKIAMIG-LGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSA---T---CTDYRDVLQ---YGVDAVMIHAA 71 (167)
T ss_dssp EEEEEEC-CCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCC---C---CSSTTGGGG---GCCSEEEECSC
T ss_pred eEEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhccccc---c---cccHHHhcc---cccceeccccc
Confidence 4688888 5788865 56666654 5678888999988888766553211 1 223332221 36899886654
Q ss_pred CCCCCC-----CCCCC---CCchhHHHHHHHHHHHHHhccC
Q 028043 161 TTAFPS-----RRWDG---DNTPEKVDWEGVRNLVSALPSS 193 (214)
Q Consensus 161 ~~~~~~-----~~~~~---~~~~~~vNv~g~~~l~~a~~~~ 193 (214)
...... ..... .++....|......+.++++..
T Consensus 72 ~~~H~~~~~~al~~gk~V~~EKP~~~~~~e~~~l~~~a~~~ 112 (167)
T d1xeaa1 72 TDVHSTLAAFFLHLGIPTFVDKPLAASAQECENLYELAEKH 112 (167)
T ss_dssp GGGHHHHHHHHHHTTCCEEEESCSCSSHHHHHHHHHHHHHT
T ss_pred ccccccccccccccccccccCCCCcCCHHHHHHHHHHHHHc
Confidence 321000 00000 1223355677777788877543
|
| >d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Nitrogenase iron protein species: Azotobacter vinelandii [TaxId: 354]
Probab=90.34 E-value=0.067 Score=41.47 Aligned_cols=35 Identities=29% Similarity=0.465 Sum_probs=29.6
Q ss_pred CCEEEEEcCchHHHHH-----HHHHHHHCCCeEEEEEcChh
Q 028043 82 SKLVLVAGGSGGVGQL-----VVASLLSRNIKSRLLLRDPE 117 (214)
Q Consensus 82 ~k~vlITGasggIG~~-----la~~L~~~G~~V~~~~r~~~ 117 (214)
||+|.|.| -||+|+- ++..|+++|++|.++|-++.
T Consensus 2 Mr~Iaisg-KGGVGKTT~a~NLA~~LA~~G~rVLlID~DpQ 41 (289)
T d2afhe1 2 MRQCAIYG-KGGIGKSTTTQNLVAALAEMGKKVMIVGCDPK 41 (289)
T ss_dssp CEEEEEEE-CTTSSHHHHHHHHHHHHHHTTCCEEEEEECSS
T ss_pred ccEEEEEC-CCCCCHHHHHHHHHHHHHHCCCCEEEEecCCC
Confidence 67888987 8999976 57889999999999998753
|
| >d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Thermotoga maritima [TaxId: 2336]
Probab=90.08 E-value=0.099 Score=37.31 Aligned_cols=74 Identities=16% Similarity=0.079 Sum_probs=42.7
Q ss_pred CEEEEEcCchHHHHHHHH-HHHH-----CCCeEEEEEcChhHHHHHhcccC---CCCEEEEEecCCChhccchhhhCCCc
Q 028043 83 KLVLVAGGSGGVGQLVVA-SLLS-----RNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAIFEGVT 153 (214)
Q Consensus 83 k~vlITGasggIG~~la~-~L~~-----~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~v~~Di~d~~~v~~~~~~~~d 153 (214)
|+|.|.||+ .+|...+- .++. .+.++++.|.++++++...+... ........ . ++. .+ .+.+.|
T Consensus 1 mKIaiIGaG-s~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~~~-t-~~~---~~-~l~~aD 73 (162)
T d1up7a1 1 MRIAVIGGG-SSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLI-S-DTF---EG-AVVDAK 73 (162)
T ss_dssp CEEEEETTT-CTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEE-C-SSH---HH-HHTTCS
T ss_pred CEEEEECCC-HHHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceEEE-e-cCc---cc-ccCCCC
Confidence 579999974 45654442 2222 14589999999988765332111 12222222 1 121 22 257899
Q ss_pred EEEeccCCCC
Q 028043 154 HVICCTGTTA 163 (214)
Q Consensus 154 ~li~~Ag~~~ 163 (214)
+||..||...
T Consensus 74 vVVita~~~~ 83 (162)
T d1up7a1 74 YVIFQFRPGG 83 (162)
T ss_dssp EEEECCCTTH
T ss_pred EEEEecccCC
Confidence 9999999754
|
| >d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Trypanosoma cruzi [TaxId: 5693]
Probab=89.84 E-value=0.19 Score=33.55 Aligned_cols=34 Identities=21% Similarity=0.276 Sum_probs=26.9
Q ss_pred CCEEEEEcCchHHHHHHHHHHH---HCCCeEEEEEcCh
Q 028043 82 SKLVLVAGGSGGVGQLVVASLL---SRNIKSRLLLRDP 116 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~---~~G~~V~~~~r~~ 116 (214)
.++++|.|| |.+|.++|..|. .+|.+|.++.|.+
T Consensus 20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~ 56 (117)
T d1aoga2 20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE 56 (117)
T ss_dssp CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence 378999995 999999996655 4566899998854
|
| >d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: MraW-like putative methyltransferases domain: TM0872, methyltransferase domain species: Thermus thermophilus [TaxId: 274]
Probab=89.84 E-value=0.32 Score=35.28 Aligned_cols=64 Identities=25% Similarity=0.279 Sum_probs=47.2
Q ss_pred HHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh-hCCCcEEEeccCCCC
Q 028043 99 VASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-FEGVTHVICCTGTTA 163 (214)
Q Consensus 99 a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~-~~~~d~li~~Ag~~~ 163 (214)
.+++++++.+|+++||+++..+..... ...++.++..+..+.+...... .+++|.++-.-|+..
T Consensus 33 s~~iL~~~~~viaiD~D~~ai~~a~~~-~~~~~~~~~~~f~~~~~~l~~~~~~~vdgIl~DLGvSs 97 (182)
T d1wg8a2 33 ARGILERGGRVIGLDQDPEAVARAKGL-HLPGLTVVQGNFRHLKRHLAALGVERVDGILADLGVSS 97 (182)
T ss_dssp HHHHHHTTCEEEEEESCHHHHHHHHHT-CCTTEEEEESCGGGHHHHHHHTTCSCEEEEEEECSCCH
T ss_pred HHHHhcccCcEEEEhhhhhHHHHHhhc-cccceeEeehHHHHHHHHHHHcCCCccCEEEEEccCCH
Confidence 455566788999999999887665433 3567899999888876554321 357999999999875
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=89.80 E-value=0.17 Score=40.44 Aligned_cols=32 Identities=22% Similarity=0.241 Sum_probs=23.7
Q ss_pred CEEEEEcC------chHHH---HHHHHHHHHCCCeEEEEEc
Q 028043 83 KLVLVAGG------SGGVG---QLVVASLLSRNIKSRLLLR 114 (214)
Q Consensus 83 k~vlITGa------sggIG---~~la~~L~~~G~~V~~~~r 114 (214)
|+|++.+. +||+| .+|+++|+++||+|.++..
T Consensus 1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp 41 (437)
T d2bisa1 1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTP 41 (437)
T ss_dssp CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCCEEEEEec
Confidence 45555443 46776 5679999999999998864
|
| >d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical protein MJ0882 domain: Hypothetical protein MJ0882 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=89.73 E-value=1.2 Score=31.84 Aligned_cols=72 Identities=11% Similarity=0.077 Sum_probs=48.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhc-----ccCCCCEEEEEecCCChhccchhhhCCCcEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFG-----KQDEETLQVCKGDTRNPKDLDPAIFEGVTHV 155 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~l 155 (214)
.+++|+=.|++.| .++..+++.+.+|++++.++...+...+ .+...+++++.+|+.+. +.. +..|+|
T Consensus 52 ~~~~VLDiGcG~G---~~~~~la~~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~~--~~~---~~fD~I 123 (194)
T d1dusa_ 52 KDDDILDLGCGYG---VIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYEN--VKD---RKYNKI 123 (194)
T ss_dssp TTCEEEEETCTTS---HHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTT--CTT---SCEEEE
T ss_pred CCCeEEEEeecCC---hhHHHHHhhccccceeeeccccchhHHHHHHHhCCccceEEEEEcchhhh--hcc---CCceEE
Confidence 4578888885544 2334556678899999999876655432 22345688899998652 332 468999
Q ss_pred EeccC
Q 028043 156 ICCTG 160 (214)
Q Consensus 156 i~~Ag 160 (214)
+.+..
T Consensus 124 i~~~p 128 (194)
T d1dusa_ 124 ITNPP 128 (194)
T ss_dssp EECCC
T ss_pred EEccc
Confidence 98754
|
| >d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=89.66 E-value=0.19 Score=39.47 Aligned_cols=36 Identities=19% Similarity=0.342 Sum_probs=30.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCC--CeEEEEEcChh
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRN--IKSRLLLRDPE 117 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G--~~V~~~~r~~~ 117 (214)
.+|+|+|.| +|--|..+|..|+++| ++|+++.|+..
T Consensus 3 ~~KrVaIIG-aG~sGl~~A~~L~~~~~~~~v~vfEk~~~ 40 (335)
T d2gv8a1 3 TIRKIAIIG-AGPSGLVTAKALLAEKAFDQVTLFERRGS 40 (335)
T ss_dssp SCCEEEEEC-CSHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred CCCeEEEEC-cCHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence 468999999 6788889999998876 58999998754
|
| >d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=89.63 E-value=0.28 Score=37.31 Aligned_cols=35 Identities=14% Similarity=0.203 Sum_probs=29.6
Q ss_pred CCCCCEEEEEcCchHHHHHHHHHHHH-CCCeEEEEEc
Q 028043 79 ASSSKLVLVAGGSGGVGQLVVASLLS-RNIKSRLLLR 114 (214)
Q Consensus 79 ~~~~k~vlITGasggIG~~la~~L~~-~G~~V~~~~r 114 (214)
++++|+|+|-| -|.+|+++++.|.+ .|++|+.+..
T Consensus 29 ~l~g~~v~IqG-fGnVG~~~a~~L~~~~G~kvv~vsD 64 (239)
T d1gtma1 29 TLKGKTIAIQG-YGNAGYYLAKIMSEDFGMKVVAVSD 64 (239)
T ss_dssp CSTTCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CcCCCEEEEEC-CCHHHHHHHHHHHHhcCcceeeccc
Confidence 46899999999 68899999999986 5999887653
|
| >d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ribosomal protein L11 methyltransferase PrmA domain: PrmA-like protein TTHA0656 (TT0836) species: Thermus thermophilus [TaxId: 274]
Probab=89.56 E-value=0.27 Score=37.65 Aligned_cols=70 Identities=16% Similarity=0.105 Sum_probs=47.7
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhccc--CCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ--DEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
.+++||=.|++.|+ ++..+++.|++|++++.++...+...+.. .+....++.+|+.+. +. .+..|+|+.|
T Consensus 120 ~g~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~n~~~~~~~~~d~~~~--~~---~~~fD~V~an 191 (254)
T d2nxca1 120 PGDKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAA--LP---FGPFDLLVAN 191 (254)
T ss_dssp TTCEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHH--GG---GCCEEEEEEE
T ss_pred ccCEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHHcCCceeEEecccccc--cc---ccccchhhhc
Confidence 46899999987775 33456778999999999998776554322 234556777776431 11 3578999876
|
| >d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Polyamine oxidase species: Maize (Zea mays) [TaxId: 4577]
Probab=89.35 E-value=0.16 Score=36.87 Aligned_cols=32 Identities=25% Similarity=0.255 Sum_probs=27.8
Q ss_pred EEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcCh
Q 028043 84 LVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDP 116 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~ 116 (214)
+|+|.| +|--|...|..|+++|+ +|+++.+++
T Consensus 2 ~V~IIG-aG~aGL~aA~~L~~~G~~~V~vlE~~~ 34 (347)
T d1b5qa1 2 RVIVVG-AGMSGISAAKRLSEAGITDLLILEATD 34 (347)
T ss_dssp CEEEEC-CBHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred CEEEEC-CcHHHHHHHHHHHhCCCCcEEEEECCC
Confidence 488998 68899999999999996 699998764
|
| >d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=89.26 E-value=0.027 Score=41.89 Aligned_cols=26 Identities=23% Similarity=0.277 Sum_probs=23.0
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeE
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKS 109 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V 109 (214)
|+|+|.| +|-+|..+|.+|+++|++|
T Consensus 1 mkV~VIG-aGi~GlstA~~L~~~G~~v 26 (246)
T d1kifa1 1 MRVVVIG-AGVIGLSTALCIHERYHSV 26 (246)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHHTTT
T ss_pred CEEEEEC-chHHHHHHHHHHHHCCCCc
Confidence 5799999 7999999999999999753
|
| >d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monoamine oxidase B species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.10 E-value=0.2 Score=38.57 Aligned_cols=31 Identities=23% Similarity=0.257 Sum_probs=27.6
Q ss_pred EEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh
Q 028043 85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP 116 (214)
Q Consensus 85 vlITGasggIG~~la~~L~~~G~~V~~~~r~~ 116 (214)
|+|.| +|--|...|..|+++|++|+++.++.
T Consensus 2 ViVIG-aG~aGL~aA~~L~~~G~~V~VlE~~~ 32 (383)
T d2v5za1 2 VVVVG-GGISGMAAAKLLHDSGLNVVVLEARD 32 (383)
T ss_dssp EEEEC-CBHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred EEEEC-CCHHHHHHHHHHHhCCCCEEEEecCC
Confidence 78888 68889999999999999999998754
|
| >d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: N5-glutamine methyltransferase, HemK domain: N5-glutamine methyltransferase, HemK species: Thermotoga maritima [TaxId: 2336]
Probab=89.08 E-value=1.4 Score=33.77 Aligned_cols=75 Identities=16% Similarity=0.166 Sum_probs=48.5
Q ss_pred CEEE-EEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcc---cC-CCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 83 KLVL-VAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGK---QD-EETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 83 k~vl-ITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~---~~-~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
++++ ++||+|.||..+++ ..+.+|++++.+++.++-..+. .. ...+.+..+|+.+.- .. ..+.+|++|.
T Consensus 112 ~~vld~g~GsG~i~~~la~---~~~~~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~~~~~~~--~~-~~~~fDlIVs 185 (271)
T d1nv8a_ 112 KTVADIGTGSGAIGVSVAK---FSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPF--KE-KFASIEMILS 185 (271)
T ss_dssp CEEEEESCTTSHHHHHHHH---HSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGG--GG-GTTTCCEEEE
T ss_pred cEEEEeeeeeehhhhhhhh---cccceeeechhhhhHHHHHHHHHHHcCCCceeEEeeccccccc--cc-ccCcccEEEE
Confidence 3555 44555556666543 3678999999999876544322 11 335677788887543 21 2468999999
Q ss_pred ccCCCC
Q 028043 158 CTGTTA 163 (214)
Q Consensus 158 ~Ag~~~ 163 (214)
|--+..
T Consensus 186 NPPYI~ 191 (271)
T d1nv8a_ 186 NPPYVK 191 (271)
T ss_dssp CCCCBC
T ss_pred cccccC
Confidence 998764
|
| >d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Crithidia fasciculata [TaxId: 5656]
Probab=88.94 E-value=0.24 Score=32.81 Aligned_cols=33 Identities=21% Similarity=0.207 Sum_probs=27.5
Q ss_pred CEEEEEcCchHHHHHHHHHHHH---CCCeEEEEEcCh
Q 028043 83 KLVLVAGGSGGVGQLVVASLLS---RNIKSRLLLRDP 116 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~---~G~~V~~~~r~~ 116 (214)
|+++|.| +|.+|-++|..|.+ .|.+|.++.|.+
T Consensus 19 ~~v~IiG-gG~ig~E~A~~l~~~~~~g~~Vtli~~~~ 54 (117)
T d1feca2 19 KRALCVG-GGYISIEFAGIFNAYKARGGQVDLAYRGD 54 (117)
T ss_dssp SEEEEEC-SSHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred CeEEEEC-CChHHHHHHHHhHhhcccccccceecccc
Confidence 7899999 79999999976554 588999998864
|
| >d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 1, PRMT1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=88.91 E-value=0.64 Score=36.32 Aligned_cols=72 Identities=15% Similarity=0.129 Sum_probs=46.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHH--HHHhcc-cCCCCEEEEEecCCChhccchhhhCCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKA--TTLFGK-QDEETLQVCKGDTRNPKDLDPAIFEGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~--~~~~~~-~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li 156 (214)
++|+||-.|++.|+ ++..+++.|+ +|++++.++... .+..+. .-..++.++.+|+.+.+.- .+..|+++
T Consensus 33 ~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~~~~~a~~~~~~n~~~~~v~~~~~~~~~~~~~----~~~~D~iv 105 (316)
T d1oria_ 33 KDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVELP----VEKVDIII 105 (316)
T ss_dssp TTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTCCCS----SSCEEEEE
T ss_pred CcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcHHHhhhhhHHHHhCCccccceEeccHHHcccc----cceeEEEe
Confidence 57899999977664 4556777886 699999875321 111111 1145688999998875422 24688888
Q ss_pred ecc
Q 028043 157 CCT 159 (214)
Q Consensus 157 ~~A 159 (214)
..-
T Consensus 106 s~~ 108 (316)
T d1oria_ 106 SEW 108 (316)
T ss_dssp ECC
T ss_pred eee
Confidence 753
|
| >d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=88.51 E-value=0.24 Score=35.78 Aligned_cols=33 Identities=24% Similarity=0.232 Sum_probs=27.2
Q ss_pred CEEEEEcCchHHHHHHHHHHHHC--CCeEEEEEcCh
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSR--NIKSRLLLRDP 116 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~--G~~V~~~~r~~ 116 (214)
|+|+|.| +|.+|.++|..|.+. +.+|+++.|++
T Consensus 1 ~KVvIIG-gG~~G~e~A~~l~~~~~~~~V~v~~~~~ 35 (198)
T d1nhpa1 1 MKVIVLG-SSHGGYEAVEELLNLHPDAEIQWYEKGD 35 (198)
T ss_dssp CEEEEEC-SSHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred CEEEEEC-CcHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 5799999 579999999999886 45788888753
|
| >d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Cholesterol oxidase of GMC family species: Streptomyces sp. [TaxId: 1931]
Probab=88.48 E-value=0.23 Score=39.26 Aligned_cols=30 Identities=17% Similarity=0.197 Sum_probs=27.1
Q ss_pred EEEEcCchHHHHHHHHHHHHCCCeEEEEEcC
Q 028043 85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRD 115 (214)
Q Consensus 85 vlITGasggIG~~la~~L~~~G~~V~~~~r~ 115 (214)
|+|.| +|.-|..+|.+|+++|++|+++-+-
T Consensus 5 VIVVG-sG~aG~v~A~rLaeaG~~VlvLEaG 34 (367)
T d1n4wa1 5 AVVIG-TGYGAAVSALRLGEAGVQTLMLEMG 34 (367)
T ss_dssp EEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EEEeC-cCHHHHHHHHHHHHCcCeEEEEecC
Confidence 78888 7899999999999999999999873
|
| >d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein YcgJ species: Bacillus subtilis [TaxId: 1423]
Probab=88.46 E-value=0.84 Score=33.60 Aligned_cols=75 Identities=11% Similarity=0.079 Sum_probs=50.5
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcc---cCCCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGK---QDEETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
.+++||=.|++.|. ++..|+++|.+|++++.++.-++...+. ....++.++++|+.+.. +. -+..|+|+.
T Consensus 16 ~~~rILDiGcGtG~---~~~~la~~~~~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~~~~-~~---~~~fD~v~~ 88 (234)
T d1xxla_ 16 AEHRVLDIGAGAGH---TALAFSPYVQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLP-FP---DDSFDIITC 88 (234)
T ss_dssp TTCEEEEESCTTSH---HHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCC-SC---TTCEEEEEE
T ss_pred CCCEEEEeCCcCcH---HHHHHHHhCCeEEEEeCChhhhhhhhhhhccccccccccccccccccc-cc---ccccceeee
Confidence 46789999977764 3456677789999999998765543322 22346889999987532 22 246898877
Q ss_pred ccCCC
Q 028043 158 CTGTT 162 (214)
Q Consensus 158 ~Ag~~ 162 (214)
+-...
T Consensus 89 ~~~l~ 93 (234)
T d1xxla_ 89 RYAAH 93 (234)
T ss_dssp ESCGG
T ss_pred eceee
Confidence 65543
|
| >d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Flavoprotein BC4706 species: Bacillus cereus [TaxId: 1396]
Probab=88.11 E-value=0.23 Score=36.85 Aligned_cols=32 Identities=22% Similarity=0.313 Sum_probs=28.5
Q ss_pred EEEEcCchHHHHHHHHHHHHCCCeEEEEEcChh
Q 028043 85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPE 117 (214)
Q Consensus 85 vlITGasggIG~~la~~L~~~G~~V~~~~r~~~ 117 (214)
|+|.| +|-.|...|..|+++|++|+++.+++.
T Consensus 5 ViIIG-aG~aGl~aA~~la~~G~~V~liEk~~~ 36 (251)
T d2i0za1 5 VIVIG-GGPSGLMAAIGAAEEGANVLLLDKGNK 36 (251)
T ss_dssp EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 88898 678999999999999999999998653
|
| >d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monooxygenase PhzS species: Pseudomonas aeruginosa [TaxId: 287]
Probab=88.02 E-value=0.3 Score=36.38 Aligned_cols=34 Identities=32% Similarity=0.330 Sum_probs=29.2
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChh
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPE 117 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~ 117 (214)
.+|+|.| +|--|..+|..|.+.|. +|.++.|+++
T Consensus 2 ~~V~IvG-aG~aGl~~A~~L~~~Gi~~V~V~Er~~~ 36 (288)
T d3c96a1 2 IDILIAG-AGIGGLSCALALHQAGIGKVTLLESSSE 36 (288)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred CEEEEEC-cCHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence 4799999 68889999999999995 8999988653
|
| >d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Apoptosis-inducing factor (AIF) species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.92 E-value=0.27 Score=33.63 Aligned_cols=34 Identities=18% Similarity=0.233 Sum_probs=27.8
Q ss_pred CCEEEEEcCchHHHHHHHHHHH----HCCCeEEEEEcCh
Q 028043 82 SKLVLVAGGSGGVGQLVVASLL----SRNIKSRLLLRDP 116 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~----~~G~~V~~~~r~~ 116 (214)
.|+++|.| +|++|-++|..|+ +.|.+|+++.+++
T Consensus 37 ~k~i~IvG-gG~~G~E~A~~l~~~~~~~g~~Vt~i~~~~ 74 (137)
T d1m6ia2 37 VKSITIIG-GGFLGSELACALGRKARALGTEVIQLFPEK 74 (137)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHHHHhcCCEEEEecccc
Confidence 36899998 6999999998885 4589999987753
|
| >d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=87.86 E-value=0.48 Score=32.04 Aligned_cols=74 Identities=16% Similarity=0.177 Sum_probs=47.9
Q ss_pred CCEEEEEcCc----------hHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhh-hC
Q 028043 82 SKLVLVAGGS----------GGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAI-FE 150 (214)
Q Consensus 82 ~k~vlITGas----------ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~-~~ 150 (214)
.|+|+|.|++ -.-|.+.+++|.+.|++++++.-|++....-.+. ..+ +...--..+.+.+.+ ..
T Consensus 4 ~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~d~--aD~---lYfeplt~e~v~~Ii~~E 78 (121)
T d1a9xa4 4 REKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDT--SDR---LYFEPVTLEDVLEIVRIE 78 (121)
T ss_dssp SCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTSTTS--SSE---EECCCCSHHHHHHHHHHH
T ss_pred CCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcChhh--cCc---eEEccCCHHHHHHHHHHh
Confidence 4799999974 3678899999999999999999998764321110 111 222222344454422 35
Q ss_pred CCcEEEeccC
Q 028043 151 GVTHVICCTG 160 (214)
Q Consensus 151 ~~d~li~~Ag 160 (214)
++|.++--.|
T Consensus 79 ~p~~ii~~~G 88 (121)
T d1a9xa4 79 KPKGVIVQYG 88 (121)
T ss_dssp CCSEEECSSS
T ss_pred CCCEEEeehh
Confidence 7898876665
|
| >d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PH1109 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=87.82 E-value=0.35 Score=33.46 Aligned_cols=33 Identities=18% Similarity=0.189 Sum_probs=29.6
Q ss_pred CEEEEEcCc---hHHHHHHHHHHHHCCCeEEEEEcC
Q 028043 83 KLVLVAGGS---GGVGQLVVASLLSRNIKSRLLLRD 115 (214)
Q Consensus 83 k~vlITGas---ggIG~~la~~L~~~G~~V~~~~r~ 115 (214)
|+|.|.||+ +..|..+++.|.+.|++|+.+..+
T Consensus 20 ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~ 55 (139)
T d2d59a1 20 KKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPK 55 (139)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTT
T ss_pred CeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCc
Confidence 789999999 789999999999999998887644
|
| >d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Arginine methyltransferase, HMT1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=87.74 E-value=1.3 Score=34.65 Aligned_cols=72 Identities=15% Similarity=0.103 Sum_probs=46.0
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhH--HHHHhccc-CCCCEEEEEecCCChhccchhhhCCCcEEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEK--ATTLFGKQ-DEETLQVCKGDTRNPKDLDPAIFEGVTHVI 156 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~--~~~~~~~~-~~~~~~~v~~Di~d~~~v~~~~~~~~d~li 156 (214)
++|+||-.|++.|+ ++..+++.|+ +|++++.++.. +.+..... ...++.++.+|+.+.+.- -...|+|+
T Consensus 38 ~~~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~~~~~a~~~~~~~~~~~~i~~i~~~~~~l~~~----~~~~D~i~ 110 (328)
T d1g6q1_ 38 KDKIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDVHLP----FPKVDIII 110 (328)
T ss_dssp TTCEEEEETCTTSH---HHHHHHHTCCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCS----SSCEEEEE
T ss_pred CcCEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhCccccceEEEeehhhccCc----ccceeEEE
Confidence 57899999977664 3556677887 68899887521 12211111 145688999998765322 13689888
Q ss_pred ecc
Q 028043 157 CCT 159 (214)
Q Consensus 157 ~~A 159 (214)
..-
T Consensus 111 se~ 113 (328)
T d1g6q1_ 111 SEW 113 (328)
T ss_dssp ECC
T ss_pred EEe
Confidence 754
|
| >d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella frigidimarina [TaxId: 56812]
Probab=87.49 E-value=0.26 Score=38.01 Aligned_cols=31 Identities=35% Similarity=0.522 Sum_probs=28.2
Q ss_pred EEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh
Q 028043 85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP 116 (214)
Q Consensus 85 vlITGasggIG~~la~~L~~~G~~V~~~~r~~ 116 (214)
|+|.| +|..|...|.+|+++|++|+++.+.+
T Consensus 19 VlVIG-~G~aGl~aA~~la~~G~~V~lvEK~~ 49 (308)
T d1y0pa2 19 VVVVG-SGGAGFSAAISATDSGAKVILIEKEP 49 (308)
T ss_dssp EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred EEEEC-cCHHHHHHHHHHHHCCCcEEEEecCC
Confidence 89998 78999999999999999999998754
|
| >d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Precorrin-6Y methyltransferase (CbiT) domain: Precorrin-6Y methyltransferase (CbiT) species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=87.39 E-value=0.7 Score=33.02 Aligned_cols=73 Identities=15% Similarity=0.185 Sum_probs=47.9
Q ss_pred CCCEEEEEcCchH-HHHHHHHHHHHCCCeEEEEEcChhHHHHHhccc---C-CCCEEEEEecCCChhccchhhhCCCcEE
Q 028043 81 SSKLVLVAGGSGG-VGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ---D-EETLQVCKGDTRNPKDLDPAIFEGVTHV 155 (214)
Q Consensus 81 ~~k~vlITGasgg-IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~v~~Di~d~~~v~~~~~~~~d~l 155 (214)
.+.+||=.|++.| ++ ..|++.+.+|++++.+++.++...+.. . ..+++++.+|..+.. .. .+.+|.+
T Consensus 33 ~g~~VLDiGcGsG~~s----~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~~~~--~~--~~~~D~v 104 (186)
T d1l3ia_ 33 KNDVAVDVGCGTGGVT----LELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEAL--CK--IPDIDIA 104 (186)
T ss_dssp TTCEEEEESCTTSHHH----HHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHH--TT--SCCEEEE
T ss_pred CCCEEEEEECCeEccc----ccccccceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchhhcc--cc--cCCcCEE
Confidence 4568888885544 44 345567789999999998766554322 1 357889998864332 11 2468999
Q ss_pred EeccCC
Q 028043 156 ICCTGT 161 (214)
Q Consensus 156 i~~Ag~ 161 (214)
+.+.+.
T Consensus 105 ~~~~~~ 110 (186)
T d1l3ia_ 105 VVGGSG 110 (186)
T ss_dssp EESCCT
T ss_pred EEeCcc
Confidence 877653
|
| >d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Acetaldehyde dehydrogenase (acylating) species: Pseudomonas sp. [TaxId: 306]
Probab=87.34 E-value=0.13 Score=36.57 Aligned_cols=34 Identities=21% Similarity=0.270 Sum_probs=23.1
Q ss_pred CEEEEEcCchHHHHHH-HHHHHHC-CCeEEEE-EcChh
Q 028043 83 KLVLVAGGSGGVGQLV-VASLLSR-NIKSRLL-LRDPE 117 (214)
Q Consensus 83 k~vlITGasggIG~~l-a~~L~~~-G~~V~~~-~r~~~ 117 (214)
.++.|.| +|+||..+ .+.|... ..+++++ +|+.+
T Consensus 5 irvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~ 41 (157)
T d1nvmb1 5 LKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAA 41 (157)
T ss_dssp EEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTT
T ss_pred cEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchh
Confidence 4799999 99999875 4555443 4466655 67654
|
| >d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=87.07 E-value=0.28 Score=34.07 Aligned_cols=30 Identities=17% Similarity=0.308 Sum_probs=25.5
Q ss_pred EEEEEcCchHHHHHHHHHHHHCCCeEEEEEcC
Q 028043 84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD 115 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~G~~V~~~~r~ 115 (214)
+|+|.| +|.+|.++|..|. ++.+|.++.|.
T Consensus 2 rVvIIG-gG~~G~e~A~~l~-~~~~Vtvv~~~ 31 (167)
T d1xhca1 2 KVVIVG-NGPGGFELAKQLS-QTYEVTVIDKE 31 (167)
T ss_dssp EEEEEC-CSHHHHHHHHHHT-TTSEEEEECSS
T ss_pred eEEEEC-CcHHHHHHHHHHH-cCCCEEEEecc
Confidence 688888 6899999999985 57899999874
|
| >d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=86.84 E-value=0.58 Score=33.27 Aligned_cols=77 Identities=13% Similarity=-0.004 Sum_probs=43.2
Q ss_pred CEEEEEcC-chHHHHHHHHHHHHC----CCeEEEEEcChhH--HHHHhcc----cCCCCEEEEEecCCChhccchhhhCC
Q 028043 83 KLVLVAGG-SGGVGQLVVASLLSR----NIKSRLLLRDPEK--ATTLFGK----QDEETLQVCKGDTRNPKDLDPAIFEG 151 (214)
Q Consensus 83 k~vlITGa-sggIG~~la~~L~~~----G~~V~~~~r~~~~--~~~~~~~----~~~~~~~~v~~Di~d~~~v~~~~~~~ 151 (214)
++|.|.|| +.|.+..++..+... +-++++.+.+++. ++.+... ....+........+|. .+ .+.+
T Consensus 2 ~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~~~td~---~~-al~g 77 (169)
T d1s6ya1 2 LKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDR---RR-ALDG 77 (169)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCH---HH-HHTT
T ss_pred cEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceeeecCCc---hh-hcCC
Confidence 47888886 446666666655543 2489999988754 3332110 1011121222223333 22 2568
Q ss_pred CcEEEeccCCCC
Q 028043 152 VTHVICCTGTTA 163 (214)
Q Consensus 152 ~d~li~~Ag~~~ 163 (214)
.|+||+.||...
T Consensus 78 aDvVv~ta~~~~ 89 (169)
T d1s6ya1 78 ADFVTTQFRVGG 89 (169)
T ss_dssp CSEEEECCCTTH
T ss_pred CCEEEEccccCC
Confidence 999999999864
|
| >d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PF0725 species: Pyrococcus furiosus [TaxId: 2261]
Probab=86.68 E-value=0.49 Score=31.55 Aligned_cols=33 Identities=18% Similarity=0.377 Sum_probs=28.8
Q ss_pred CEEEEEcCc---hHHHHHHHHHHHHCCCeEEEEEcC
Q 028043 83 KLVLVAGGS---GGVGQLVVASLLSRNIKSRLLLRD 115 (214)
Q Consensus 83 k~vlITGas---ggIG~~la~~L~~~G~~V~~~~r~ 115 (214)
|+|.|.|+| +..|..+.+.|.+.|++|+.+..+
T Consensus 2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~ 37 (116)
T d1y81a1 2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPN 37 (116)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTT
T ss_pred cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccc
Confidence 689999998 679999999999999998877543
|
| >d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Probable oxidoreductase At4g09670 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=86.64 E-value=0.72 Score=32.81 Aligned_cols=70 Identities=14% Similarity=0.064 Sum_probs=44.0
Q ss_pred EEEEEcCchHHHHHHHHHHHHC-CCeEEE-EEcChhHHHHHhcccCC-CCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 84 LVLVAGGSGGVGQLVVASLLSR-NIKSRL-LLRDPEKATTLFGKQDE-ETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~-G~~V~~-~~r~~~~~~~~~~~~~~-~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
++.|.| .|++|+..++.+... +.+|++ .++++++.+++.++..- ....+ ..|.+++-+ -..+|+|+-+..
T Consensus 3 ki~iIG-~G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~----~~~~~~ll~--~~~iD~v~I~tp 75 (184)
T d1ydwa1 3 RIGVMG-CADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKI----HGSYESLLE--DPEIDALYVPLP 75 (184)
T ss_dssp EEEEES-CCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEE----ESSHHHHHH--CTTCCEEEECCC
T ss_pred EEEEEc-CCHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccccceee----cCcHHHhhh--ccccceeeeccc
Confidence 688888 578999999998775 667774 58888887776554431 11221 123332221 246899886554
|
| >d2h00a1 c.66.1.54 (A:5-254) Methyltransferase 10 domain containing protein METT10D {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Methyltransferase 10 domain domain: Methyltransferase 10 domain containing protein METT10D species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.52 E-value=2.3 Score=31.95 Aligned_cols=79 Identities=14% Similarity=0.015 Sum_probs=50.3
Q ss_pred CEEEEEc-CchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC----CCCEEEEEecCCCh--hccchhhhCCCcEE
Q 028043 83 KLVLVAG-GSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD----EETLQVCKGDTRNP--KDLDPAIFEGVTHV 155 (214)
Q Consensus 83 k~vlITG-asggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~v~~Di~d~--~~v~~~~~~~~d~l 155 (214)
.+++=.| |+|.|+-.++.++ .+++|++++.+++.++-..+... ..++..+..|..+. +.+....-+..|++
T Consensus 63 ~~~LDiGtGsg~I~~~l~~~~--~~~~~~~~Di~~~al~~A~~N~~~n~l~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i 140 (250)
T d2h00a1 63 RRGIDIGTGASCIYPLLGATL--NGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFC 140 (250)
T ss_dssp CEEEEESCTTTTHHHHHHHHH--HCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEE
T ss_pred ceEEEeCCCchHHHHHHHHhC--CCccccceecCHHHHHHHHHHHHHhCCCcceeeeeeccHHhhhhhhhhcccCceeEE
Confidence 4666666 5788999999886 47999999999987655433221 34566666554321 11221112358999
Q ss_pred EeccCCCC
Q 028043 156 ICCTGTTA 163 (214)
Q Consensus 156 i~~Ag~~~ 163 (214)
|.|--+..
T Consensus 141 vsNPPY~~ 148 (250)
T d2h00a1 141 MCNPPFFA 148 (250)
T ss_dssp EECCCCC-
T ss_pred EecCcccc
Confidence 99998764
|
| >d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: mRNA cap (Guanine N-7) methyltransferase domain: mRNA cap (Guanine N-7) methyltransferase species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]
Probab=86.42 E-value=1.1 Score=33.34 Aligned_cols=77 Identities=8% Similarity=-0.159 Sum_probs=50.6
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCC-eEEEEEcChhHHHHHhccc---C-CCCEEEEEecCCChhccchhhhCCCcEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNI-KSRLLLRDPEKATTLFGKQ---D-EETLQVCKGDTRNPKDLDPAIFEGVTHV 155 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~---~-~~~~~~v~~Di~d~~~v~~~~~~~~d~l 155 (214)
.+++||=.|++.| . .+..+++.|. +|+++|.+++.++...+.. . ..++.+.++|+.+..... -+..|+|
T Consensus 24 ~~~~VLDlGCG~G--~-~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~---~~~fD~V 97 (252)
T d1ri5a_ 24 RGDSVLDLGCGKG--G-DLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDL---GKEFDVI 97 (252)
T ss_dssp TTCEEEEETCTTT--T-THHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCC---SSCEEEE
T ss_pred CcCEEEEecccCc--H-HHHHHHHcCCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcchhhhcccc---cccceEE
Confidence 3578999996654 2 2445566665 7999999998876654322 1 346888999986543211 1358998
Q ss_pred EeccCCCC
Q 028043 156 ICCTGTTA 163 (214)
Q Consensus 156 i~~Ag~~~ 163 (214)
+.+.+..+
T Consensus 98 ~~~~~l~~ 105 (252)
T d1ri5a_ 98 SSQFSFHY 105 (252)
T ss_dssp EEESCGGG
T ss_pred EEcceeee
Confidence 87766543
|
| >d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: Polymyxin resistance protein ArnA, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=86.40 E-value=0.27 Score=36.21 Aligned_cols=73 Identities=11% Similarity=0.120 Sum_probs=41.9
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEE-cChhH--------HHHHhcccCCCCEEEEE-ecCCChhccchhhhCCC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLL-RDPEK--------ATTLFGKQDEETLQVCK-GDTRNPKDLDPAIFEGV 152 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~-r~~~~--------~~~~~~~~~~~~~~~v~-~Di~d~~~v~~~~~~~~ 152 (214)
|+|++.| ++..|..+.+.|.+.|++|.++. +.+.+ ..+.+.+ .++.+.. -|+.+++.++...-.++
T Consensus 1 Mkiv~~~-~~~~g~~~l~~L~~~g~~I~~Vvt~~~~~~~~~~~~~~~~~a~~---~~i~~~~~~~~~~~~~~~~i~~~~~ 76 (203)
T d2blna2 1 MKTVVFA-YHDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAE---RGIPVYAPDNVNHPLWVERIAQLSP 76 (203)
T ss_dssp CEEEEEE-CHHHHHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHHH---HTCCEECCSCCCSHHHHHHHHHTCC
T ss_pred CeEEEEe-cCHHHHHHHHHHHHCCCCEEEEEcCCCCCCcccccCHHHHHHHH---cCCcceecccccchhhhhhhhhhcc
Confidence 4677776 56789999999999999987654 32211 1122211 1233332 46666555443212367
Q ss_pred cEEEecc
Q 028043 153 THVICCT 159 (214)
Q Consensus 153 d~li~~A 159 (214)
|++|...
T Consensus 77 Dlii~~g 83 (203)
T d2blna2 77 DVIFSFY 83 (203)
T ss_dssp SEEEEES
T ss_pred cceeeee
Confidence 8777554
|
| >d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=86.25 E-value=2.2 Score=31.68 Aligned_cols=77 Identities=17% Similarity=0.138 Sum_probs=56.2
Q ss_pred CCCEEEEEcCc-hHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC-CCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 81 SSKLVLVAGGS-GGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 81 ~~k~vlITGas-ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
.|.+||=.|++ |..-.++++. ...+-+|++++.++..++.+.+... ..++..+..|..+++.... ....+|++++.
T Consensus 73 pG~~VLDlGaGsG~~t~~la~~-VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~~~~~~~~-~~~~vD~i~~d 150 (227)
T d1g8aa_ 73 PGKSVLYLGIASGTTASHVSDI-VGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRA-LVPKVDVIFED 150 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHHHH-HCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTT-TCCCEEEEEEC
T ss_pred CCCEEEEeccCCCHHHHHHHHH-hCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEECCCcccccc-cccceEEEEEE
Confidence 57889988865 5666677764 4456789999999988877655443 3467788899998887654 34678888875
Q ss_pred c
Q 028043 159 T 159 (214)
Q Consensus 159 A 159 (214)
.
T Consensus 151 ~ 151 (227)
T d1g8aa_ 151 V 151 (227)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Diaminopimelic acid dehydrogenase (DAPDH) species: Corynebacterium glutamicum [TaxId: 1718]
Probab=86.16 E-value=0.3 Score=34.69 Aligned_cols=64 Identities=19% Similarity=0.292 Sum_probs=39.1
Q ss_pred CEEEEEcCchHHHHHHHHHHHHC-CCeEEE-EEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEeccC
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSR-NIKSRL-LLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCTG 160 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~-G~~V~~-~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~Ag 160 (214)
.+|.|.| .|.||+..++.+.+. +.+++. .+|+++... ...+. . . ++... ..+++|+|+.+..
T Consensus 4 irvgiiG-~G~ig~~~~~~l~~~~~~elvav~~~~~~~~~-------~~~~~--~--~---~~~~~-~~~~~D~Vvi~tp 67 (170)
T d1f06a1 4 IRVAIVG-YGNLGRSVEKLIAKQPDMDLVGIFSRRATLDT-------KTPVF--D--V---ADVDK-HADDVDVLFLCMG 67 (170)
T ss_dssp EEEEEEC-CSHHHHHHHHHHTTCSSEEEEEEEESSSCCSS-------SSCEE--E--G---GGGGG-TTTTCSEEEECSC
T ss_pred ceEEEEC-ChHHHHHHHHHHHhCCCcEEEEEEeccccccc-------ccccc--c--c---hhhhh-hccccceEEEeCC
Confidence 4789998 699999999999874 667665 455543221 11111 1 1 12222 2457999988776
Q ss_pred CC
Q 028043 161 TT 162 (214)
Q Consensus 161 ~~ 162 (214)
..
T Consensus 68 ~~ 69 (170)
T d1f06a1 68 SA 69 (170)
T ss_dssp TT
T ss_pred Cc
Confidence 54
|
| >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Escherichia coli [TaxId: 562]
Probab=86.01 E-value=0.22 Score=35.53 Aligned_cols=34 Identities=21% Similarity=0.365 Sum_probs=27.0
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHC-CCeEEEE-EcC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSR-NIKSRLL-LRD 115 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~-G~~V~~~-~r~ 115 (214)
..+|.|.|++|.+|+++++.+.+. +.+++.. +|.
T Consensus 4 ~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~ 39 (162)
T d1diha1 4 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALERE 39 (162)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCT
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecc
Confidence 368999999999999999998875 6676544 443
|
| >d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=85.98 E-value=0.14 Score=36.59 Aligned_cols=30 Identities=23% Similarity=0.243 Sum_probs=24.5
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEE
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLL 113 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~ 113 (214)
.+|+|.| +|.+|.++|..|.+.|.++.++.
T Consensus 4 a~VvIIG-gG~~G~e~A~~l~~~g~~v~i~~ 33 (183)
T d1d7ya1 4 APVVVLG-AGLASVSFVAELRQAGYQGLITV 33 (183)
T ss_dssp SSEEEEC-CSHHHHHHHHHHHHHTCCSCEEE
T ss_pred CCEEEEC-ccHHHHHHHHHHHhcCCceEEEE
Confidence 3588998 79999999999999998755443
|
| >d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=85.57 E-value=0.4 Score=33.44 Aligned_cols=39 Identities=26% Similarity=0.158 Sum_probs=30.4
Q ss_pred EEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhc
Q 028043 84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFG 124 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~ 124 (214)
+|-+.| .|-+|+.+++.|++.|+.+ +..|+.++..+..+
T Consensus 2 kIg~IG-lG~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~ 40 (156)
T d2cvza2 2 KVAFIG-LGAMGYPMAGHLARRFPTL-VWNRTFEKALRHQE 40 (156)
T ss_dssp CEEEEC-CSTTHHHHHHHHHTTSCEE-EECSSTHHHHHHHH
T ss_pred eEEEEe-HHHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHH
Confidence 477888 6999999999999999866 56777766655443
|
| >d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: AD-003 protein-like domain: Adrenal gland protein AD-003 (C9orf32) species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.57 E-value=0.96 Score=33.02 Aligned_cols=77 Identities=6% Similarity=-0.093 Sum_probs=48.4
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC---CCCEEEEEecCCChhccchhhhCCCcEEEe
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKDLDPAIFEGVTHVIC 157 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~v~~Di~d~~~v~~~~~~~~d~li~ 157 (214)
.+++||=.|++.| ..+...+.+.+.+|++++-+++-++...+... ..+++++.+|+.+... . -+..|+|+.
T Consensus 60 ~~~~vLDiGcG~G--~~~~~l~~~~~~~v~~vD~s~~~l~~ak~~~~~~~~~~~~f~~~d~~~~~~-~---~~~fD~I~~ 133 (222)
T d2ex4a1 60 GTSCALDCGAGIG--RITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTP-E---PDSYDVIWI 133 (222)
T ss_dssp CCSEEEEETCTTT--HHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCC-C---SSCEEEEEE
T ss_pred CCCEEEEeccCCC--HhhHHHHHhcCCEEEEeecCHHHhhcccccccccccccccccccccccccc-c---ccccccccc
Confidence 4578999995444 33333233445689999999887766544322 2356888899876431 1 246899887
Q ss_pred ccCCCC
Q 028043 158 CTGTTA 163 (214)
Q Consensus 158 ~Ag~~~ 163 (214)
.....+
T Consensus 134 ~~~l~h 139 (222)
T d2ex4a1 134 QWVIGH 139 (222)
T ss_dssp ESCGGG
T ss_pred cccccc
Confidence 765543
|
| >d1uwva2 c.66.1.40 (A:75-432) rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: (Uracil-5-)-methyltransferase domain: rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain species: Escherichia coli [TaxId: 562]
Probab=85.56 E-value=2.6 Score=33.00 Aligned_cols=72 Identities=8% Similarity=0.022 Sum_probs=46.6
Q ss_pred EEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcc---cCCCCEEEEEecCCChhccchhhhCCCcEEEecc
Q 028043 84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGK---QDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~A 159 (214)
.+=.-+|+|.+|..++ +.+.+|+++..+++..+...+. ..-.+++++.+|+.+.-.........+|+||-.-
T Consensus 216 vlDLycG~G~fsl~La----~~~~~V~gvE~~~~ai~~A~~na~~n~i~n~~~~~~~~~~~~~~~~~~~~~~d~vilDP 290 (358)
T d1uwva2 216 VLDLFCGMGNFTLPLA----TQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDP 290 (358)
T ss_dssp EEEESCTTTTTHHHHH----TTSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEECC
T ss_pred EEEecccccccchhcc----ccccEEEeccCcHHHHHHHHHhHHhcccccceeeecchhhhhhhhhhhhccCceEEeCC
Confidence 3345678888887764 5678999999998776554322 2234688898888754322221234689887654
|
| >d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: Putative sarcosine dimethylglycine methyltransferase species: Red algae (Galdieria sulphuraria) [TaxId: 130081]
Probab=85.32 E-value=2.2 Score=32.16 Aligned_cols=76 Identities=11% Similarity=0.015 Sum_probs=48.7
Q ss_pred CCCEEEEEcCchH-HHHHHHHHHHHCCCeEEEEEcChhHHHHHhccc---C-CCCEEEEEecCCChhccchhhhCCCcEE
Q 028043 81 SSKLVLVAGGSGG-VGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ---D-EETLQVCKGDTRNPKDLDPAIFEGVTHV 155 (214)
Q Consensus 81 ~~k~vlITGasgg-IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~v~~Di~d~~~v~~~~~~~~d~l 155 (214)
.+.+||=.|++.| ....++++ .|++|++++-++...+...+.. . ..+++++.+|..+.. .. -+..|+|
T Consensus 67 ~~~~vLDiGcG~G~~~~~la~~---~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~l~-~~---~~sfD~V 139 (282)
T d2o57a1 67 RQAKGLDLGAGYGGAARFLVRK---FGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIP-CE---DNSYDFI 139 (282)
T ss_dssp TTCEEEEETCTTSHHHHHHHHH---HCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCS-SC---TTCEEEE
T ss_pred CCCEEEEeCCCCcHHHhhhhcc---CCcEEEEEeccchhhhhhhccccccccccccccccccccccc-cc---ccccchh
Confidence 4679999996544 44444433 2889999999987654433221 1 357899999987643 22 1468999
Q ss_pred EeccCCCC
Q 028043 156 ICCTGTTA 163 (214)
Q Consensus 156 i~~Ag~~~ 163 (214)
+......+
T Consensus 140 ~~~~~l~h 147 (282)
T d2o57a1 140 WSQDAFLH 147 (282)
T ss_dssp EEESCGGG
T ss_pred hccchhhh
Confidence 87665443
|
| >d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Phenylacetone monooxygenase species: Thermobifida fusca [TaxId: 2021]
Probab=85.17 E-value=0.6 Score=33.92 Aligned_cols=38 Identities=24% Similarity=0.275 Sum_probs=32.3
Q ss_pred CCCCCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh
Q 028043 78 PASSSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP 116 (214)
Q Consensus 78 ~~~~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~ 116 (214)
..++||+|+|.| +|--|-.+|.++++.+.+++.+.|..
T Consensus 28 ~~~~gK~V~VvG-~G~Sa~dia~~~~~~~~~~~~~~~~~ 65 (235)
T d1w4xa2 28 VDFSGQRVGVIG-TGSSGIQVSPQIAKQAAELFVFQRTP 65 (235)
T ss_dssp CCCBTCEEEEEC-CSHHHHHHHHHHHHHBSEEEEEESSC
T ss_pred CCCCCCEEEEEC-CCccHHHHHHHHHhhhcccccccccc
Confidence 457899999999 56679999999999999988887764
|
| >d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Hypothetical protein HI0933 species: Haemophilus influenzae [TaxId: 727]
Probab=84.72 E-value=0.42 Score=35.81 Aligned_cols=35 Identities=14% Similarity=0.209 Sum_probs=30.2
Q ss_pred EEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHH
Q 028043 84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKA 119 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~ 119 (214)
-|+|.| +|--|...|..|+++|.+|.++.+++...
T Consensus 6 DViIIG-aG~aGl~aA~~la~~G~~V~vlEk~~~~G 40 (253)
T d2gqfa1 6 ENIIIG-AGAAGLFCAAQLAKLGKSVTVFDNGKKIG 40 (253)
T ss_dssp SEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred cEEEEC-cCHHHHHHHHHHHHCCCcEEEEecCCCCC
Confidence 488888 68889999999999999999999986543
|
| >d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella putrefaciens [TaxId: 24]
Probab=84.66 E-value=0.39 Score=37.26 Aligned_cols=31 Identities=35% Similarity=0.538 Sum_probs=28.0
Q ss_pred EEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh
Q 028043 85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP 116 (214)
Q Consensus 85 vlITGasggIG~~la~~L~~~G~~V~~~~r~~ 116 (214)
|+|.| +|.-|...|.+|+++|++|+++.+.+
T Consensus 26 VvVIG-~G~aGl~aA~~la~~G~~V~llEk~~ 56 (322)
T d1d4ca2 26 VVIIG-SGGAGLAAAVSARDAGAKVILLEKEP 56 (322)
T ss_dssp EEEEC-SSHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 88888 78889999999999999999998754
|
| >d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Cholesterol oxidase of GMC family species: Brevibacterium sterolicum [TaxId: 1702]
Probab=84.30 E-value=0.46 Score=37.51 Aligned_cols=31 Identities=26% Similarity=0.311 Sum_probs=27.0
Q ss_pred EEEEEcCchHHHHHHHHHHHHCCCeEEEEEcC
Q 028043 84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD 115 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~G~~V~~~~r~ 115 (214)
-|+|.| +|.-|..+|.+|++.|.+|+++-+-
T Consensus 9 dvIVVG-sG~aG~v~A~rLaeaG~~VlvLEaG 39 (370)
T d3coxa1 9 PALVIG-SGYGGAVAALRLTQAGIPTQIVEMG 39 (370)
T ss_dssp EEEEEC-CSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 378888 6788999999999999999999763
|
| >d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=84.28 E-value=4.7 Score=29.67 Aligned_cols=76 Identities=17% Similarity=0.154 Sum_probs=51.6
Q ss_pred CCCEEEEEcCc-hHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC-CCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 81 SSKLVLVAGGS-GGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD-EETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 81 ~~k~vlITGas-ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
.|.+||=.|++ |..-.++++. .. +..|++++.++..++.+.+... ..++..+..|..++...... ...+|++++.
T Consensus 74 pG~~VLDlGcGsG~~~~~la~~-~~-~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~-~~~v~~i~~~ 150 (230)
T d1g8sa_ 74 RDSKILYLGASAGTTPSHVADI-AD-KGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANI-VEKVDVIYED 150 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHH-TT-TSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTT-CCCEEEEEEC
T ss_pred CCCEEEEeCEEcCHHHHHHHHh-CC-CCEEEEEeCcHHHHHHHHHHHhhhcccceEEEeeccCcccccc-cceeEEeecc
Confidence 57899999976 4555667764 33 3489999999987776554333 45677888999888766542 3345666554
Q ss_pred c
Q 028043 159 T 159 (214)
Q Consensus 159 A 159 (214)
.
T Consensus 151 ~ 151 (230)
T d1g8sa_ 151 V 151 (230)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=84.14 E-value=1.4 Score=32.68 Aligned_cols=79 Identities=13% Similarity=0.138 Sum_probs=51.2
Q ss_pred CCCEEEEEcCchHHHHHHHHHHH-HCC----CeEEEEEcChhHHHHHhcc--------cCCCCEEEEEecCCChhccchh
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLL-SRN----IKSRLLLRDPEKATTLFGK--------QDEETLQVCKGDTRNPKDLDPA 147 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~-~~G----~~V~~~~r~~~~~~~~~~~--------~~~~~~~~v~~Di~d~~~v~~~ 147 (214)
.+.+||..|+++|--.++.-+++ ..| .+|+.+.++++-.+...+. ....++.++.+|..+- ...
T Consensus 80 ~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~~--~~~- 156 (223)
T d1r18a_ 80 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKG--YPP- 156 (223)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGC--CGG-
T ss_pred CCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEecccccc--ccc-
Confidence 45799999977666666555554 455 4899999988655433221 1124688888887632 221
Q ss_pred hhCCCcEEEeccCCCC
Q 028043 148 IFEGVTHVICCTGTTA 163 (214)
Q Consensus 148 ~~~~~d~li~~Ag~~~ 163 (214)
.+..|.++..++...
T Consensus 157 -~~~fD~Iiv~~a~~~ 171 (223)
T d1r18a_ 157 -NAPYNAIHVGAAAPD 171 (223)
T ss_dssp -GCSEEEEEECSCBSS
T ss_pred -ccceeeEEEEeechh
Confidence 346899999888643
|
| >d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein ECA1738 species: Erwinia carotovora [TaxId: 554]
Probab=83.90 E-value=1.2 Score=32.58 Aligned_cols=70 Identities=9% Similarity=0.044 Sum_probs=47.9
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEecc
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~A 159 (214)
++++||=.|++.|. +++.|+++|++|++++.+++..+...+.. ..++.++.+|+.+... -+..|+|+...
T Consensus 20 ~~~~VLDiGcG~G~---~~~~l~~~g~~v~giD~s~~~i~~a~~~~-~~~~~~~~~~~~~~~~-----~~~fD~I~~~~ 89 (225)
T d2p7ia1 20 RPGNLLELGSFKGD---FTSRLQEHFNDITCVEASEEAISHAQGRL-KDGITYIHSRFEDAQL-----PRRYDNIVLTH 89 (225)
T ss_dssp CSSCEEEESCTTSH---HHHHHTTTCSCEEEEESCHHHHHHHHHHS-CSCEEEEESCGGGCCC-----SSCEEEEEEES
T ss_pred CCCcEEEEeCCCcH---HHHHHHHcCCeEEEEeCcHHHhhhhhccc-cccccccccccccccc-----ccccccccccc
Confidence 45679988865542 24667888999999999998776655443 3468888887765321 23578887543
|
| >d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=83.86 E-value=0.55 Score=33.99 Aligned_cols=30 Identities=17% Similarity=0.183 Sum_probs=27.4
Q ss_pred EEEEcCchHHHHHHHHHHHHCCCeEEEEEcC
Q 028043 85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLRD 115 (214)
Q Consensus 85 vlITGasggIG~~la~~L~~~G~~V~~~~r~ 115 (214)
++|.| +|..|...+.++++.|.+|.++.++
T Consensus 5 vvVIG-~G~aG~~aA~~a~~~G~kV~iiE~~ 34 (217)
T d1gesa1 5 YIAIG-GGSGGIASINRAAMYGQKCALIEAK 34 (217)
T ss_dssp EEEEC-CSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred EEEEC-CCHHHHHHHHHHHHCCCEEEEEecc
Confidence 78888 4999999999999999999999875
|
| >d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 3 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=83.72 E-value=0.74 Score=32.15 Aligned_cols=35 Identities=23% Similarity=0.242 Sum_probs=28.3
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHHCCCe-EEEEEcCh
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLSRNIK-SRLLLRDP 116 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~~G~~-V~~~~r~~ 116 (214)
.+++|+|.| +|.+|...|..+.+.|++ |+++.|++
T Consensus 44 ~~~kVvVIG-GGdtA~D~A~~a~r~GA~~V~vi~rr~ 79 (153)
T d1gtea3 44 IRGAVIVLG-AGDTAFDCATSALRCGARRVFLVFRKG 79 (153)
T ss_dssp CCSEEEEEC-SSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCCEEEEEC-CChhHHHHHHHHHHcCCcceeEEEeCC
Confidence 356788887 789999999999999986 77777753
|
| >d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Phenylacetone monooxygenase species: Thermobifida fusca [TaxId: 2021]
Probab=83.56 E-value=0.48 Score=36.86 Aligned_cols=33 Identities=21% Similarity=0.154 Sum_probs=29.1
Q ss_pred CEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP 116 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~ 116 (214)
-.|+|.| +|.-|..++..|.+.|.+|+++.+++
T Consensus 8 ~dV~IIG-AG~sGl~~a~~L~~~G~~v~i~Ek~~ 40 (298)
T d1w4xa1 8 VDVLVVG-AGFSGLYALYRLRELGRSVHVIETAG 40 (298)
T ss_dssp EEEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEEC-ccHHHHHHHHHHHhCCCCEEEEEcCC
Confidence 4699999 68999999999999999999998753
|
| >d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Pyranose 2-oxidase species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]
Probab=83.36 E-value=0.57 Score=36.51 Aligned_cols=29 Identities=24% Similarity=0.370 Sum_probs=25.7
Q ss_pred EEEEcCchHHHHHHHHHHHHCCCeEEEEEc
Q 028043 85 VLVAGGSGGVGQLVVASLLSRNIKSRLLLR 114 (214)
Q Consensus 85 vlITGasggIG~~la~~L~~~G~~V~~~~r 114 (214)
++|.| +|--|..+|.+|++.|++|+++-+
T Consensus 7 viIVG-sG~aG~v~A~~La~~G~kVlvLEa 35 (379)
T d2f5va1 7 VVIVG-SGPIGCTYARELVGAGYKVAMFDI 35 (379)
T ss_dssp EEEEC-CSHHHHHHHHHHHHTTCEEEEECS
T ss_pred EEEEC-cCHHHHHHHHHHhhCCCeEEEEec
Confidence 78888 677799999999999999999975
|
| >d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein Ta0852 species: Thermoplasma acidophilum [TaxId: 2303]
Probab=83.30 E-value=2.1 Score=32.29 Aligned_cols=73 Identities=14% Similarity=0.186 Sum_probs=50.0
Q ss_pred CCCEEEEEcCc-hHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhccc----CCCCEEEEEecCCChhccchhhhCCCcEE
Q 028043 81 SSKLVLVAGGS-GGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQ----DEETLQVCKGDTRNPKDLDPAIFEGVTHV 155 (214)
Q Consensus 81 ~~k~vlITGas-ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~v~~Di~d~~~v~~~~~~~~d~l 155 (214)
.|++||=.|++ |++..++++.+ ..+.+|+.++++++..+...+.+ ...++++..+|+.+. +.+ ..+|.|
T Consensus 85 pG~rVLEiG~GsG~lt~~la~~v-~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~Di~~~--~~~---~~fD~V 158 (250)
T d1yb2a1 85 PGMDILEVGVGSGNMSSYILYAL-NGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADF--ISD---QMYDAV 158 (250)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHH-TTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTC--CCS---CCEEEE
T ss_pred CcCEEEEeeeeCcHHHHHHHHHh-CCCcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEEeeeecc--ccc---ceeeee
Confidence 57899999965 55566677665 44568999999998776554432 245788888898753 221 357988
Q ss_pred Eecc
Q 028043 156 ICCT 159 (214)
Q Consensus 156 i~~A 159 (214)
+.+.
T Consensus 159 ~ld~ 162 (250)
T d1yb2a1 159 IADI 162 (250)
T ss_dssp EECC
T ss_pred eecC
Confidence 8654
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=83.11 E-value=0.51 Score=38.69 Aligned_cols=23 Identities=22% Similarity=0.521 Sum_probs=19.8
Q ss_pred chHHH---HHHHHHHHHCCCeEEEEE
Q 028043 91 SGGVG---QLVVASLLSRNIKSRLLL 113 (214)
Q Consensus 91 sggIG---~~la~~L~~~G~~V~~~~ 113 (214)
+||+| .+|+++|+++|++|.++.
T Consensus 16 ~GGl~~vv~~La~~L~~~Gh~V~Vi~ 41 (477)
T d1rzua_ 16 TGGLADVVGALPIALEAHGVRTRTLI 41 (477)
T ss_dssp SSHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred cCcHHHHHHHHHHHHHHcCCeEEEEe
Confidence 58877 667999999999999986
|
| >d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Thi4-like domain: Thiazole biosynthetic enzyme Thi4 species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]
Probab=82.85 E-value=0.61 Score=35.39 Aligned_cols=33 Identities=18% Similarity=0.315 Sum_probs=28.8
Q ss_pred CEEEEEcCchHHHHHHHHHHHHC-CCeEEEEEcCh
Q 028043 83 KLVLVAGGSGGVGQLVVASLLSR-NIKSRLLLRDP 116 (214)
Q Consensus 83 k~vlITGasggIG~~la~~L~~~-G~~V~~~~r~~ 116 (214)
.-|+|.|| |--|...|.+|+++ |++|.++.+++
T Consensus 34 ~DViVIGa-GpaGL~aA~~LA~~~G~~V~vlE~~~ 67 (278)
T d1rp0a1 34 TDVVVVGA-GSAGLSAAYEISKNPNVQVAIIEQSV 67 (278)
T ss_dssp EEEEEECC-SHHHHHHHHHHHTSTTSCEEEEESSS
T ss_pred CCEEEECC-CHHHHHHHHHHHHccCCeEEEEecCC
Confidence 45999995 89999999999874 99999999875
|
| >d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein TTHA1280, middle and C-terminal domains species: Thermus thermophilus [TaxId: 274]
Probab=82.71 E-value=1.4 Score=34.51 Aligned_cols=77 Identities=10% Similarity=-0.063 Sum_probs=49.5
Q ss_pred CCCEEEEEc-CchHHHHHHHHHHHHCCCeEEEEEcChhHHHHHhcccC---CCCEEEEEecCCChhc-cchhhhCCCcEE
Q 028043 81 SSKLVLVAG-GSGGVGQLVVASLLSRNIKSRLLLRDPEKATTLFGKQD---EETLQVCKGDTRNPKD-LDPAIFEGVTHV 155 (214)
Q Consensus 81 ~~k~vlITG-asggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~v~~Di~d~~~-v~~~~~~~~d~l 155 (214)
+|++||=.+ ++|+.+.++ +..|.+|+.++.++..++...+... -.+++++.+|..+... +.. .-+..|+|
T Consensus 145 ~g~rVLDl~~gtG~~s~~~----a~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~~~~~~~~-~~~~fD~V 219 (318)
T d1wxxa2 145 RGERALDVFSYAGGFALHL----ALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEK-EGERFDLV 219 (318)
T ss_dssp CEEEEEEETCTTTHHHHHH----HHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHH-TTCCEEEE
T ss_pred CCCeeeccCCCCcHHHHHH----HhcCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHHHhhhhHh-hhcCCCEE
Confidence 577887665 456665544 3456789999999987765543221 2357888898876432 221 12469999
Q ss_pred EeccCCC
Q 028043 156 ICCTGTT 162 (214)
Q Consensus 156 i~~Ag~~ 162 (214)
|.+....
T Consensus 220 i~DpP~~ 226 (318)
T d1wxxa2 220 VLDPPAF 226 (318)
T ss_dssp EECCCCS
T ss_pred EEcCCcc
Confidence 9987543
|
| >d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical Protein YjhP domain: Hypothetical Protein YjhP species: Escherichia coli [TaxId: 562]
Probab=81.79 E-value=2.5 Score=31.04 Aligned_cols=75 Identities=12% Similarity=0.099 Sum_probs=47.8
Q ss_pred CCCEEEEEcCchHHHHHHHHHHHH-CCCeEEEEEcChhHHHHHhc---ccC-CCCEEEEEecCCChhccchhhhCCCcEE
Q 028043 81 SSKLVLVAGGSGGVGQLVVASLLS-RNIKSRLLLRDPEKATTLFG---KQD-EETLQVCKGDTRNPKDLDPAIFEGVTHV 155 (214)
Q Consensus 81 ~~k~vlITGasggIG~~la~~L~~-~G~~V~~~~r~~~~~~~~~~---~~~-~~~~~~v~~Di~d~~~v~~~~~~~~d~l 155 (214)
.|++||=.|++.| . ++..|++ .|.+|++++-++...+...+ ... ..+++++.+|+.+.. . -+..|.|
T Consensus 33 pg~~VLDiGCG~G--~-~~~~la~~~~~~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~d~~~~~--~---~~~fD~v 104 (245)
T d1nkva_ 33 PGTRILDLGSGSG--E-MLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYV--A---NEKCDVA 104 (245)
T ss_dssp TTCEEEEETCTTC--H-HHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCC--C---SSCEEEE
T ss_pred CCCEEEEEcCCCC--H-HHHHHHHhcCCEEEEEecccchhhHHHHHHHHhhccccchhhhhHHhhcc--c---cCceeEE
Confidence 3678999996544 2 3344444 58999999999876544322 121 346899999987642 1 2457888
Q ss_pred EeccCCCC
Q 028043 156 ICCTGTTA 163 (214)
Q Consensus 156 i~~Ag~~~ 163 (214)
+..-...+
T Consensus 105 ~~~~~~~~ 112 (245)
T d1nkva_ 105 ACVGATWI 112 (245)
T ss_dssp EEESCGGG
T ss_pred EEEehhhc
Confidence 76655443
|
| >d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM0312 species: Thermotoga maritima [TaxId: 2336]
Probab=81.50 E-value=2.3 Score=29.97 Aligned_cols=69 Identities=12% Similarity=-0.010 Sum_probs=41.9
Q ss_pred CEEEEEcCchHHHHH-HHHHHHHCC--CeEE-EEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEec
Q 028043 83 KLVLVAGGSGGVGQL-VVASLLSRN--IKSR-LLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICC 158 (214)
Q Consensus 83 k~vlITGasggIG~~-la~~L~~~G--~~V~-~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~ 158 (214)
.++.|.| +|.+|+. ..+.+.+.+ .+|+ ++++++++.+.+.+...... + ..|.+++-+ -..+|+|+-+
T Consensus 4 irigiIG-~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~---~---~~~~~ell~--~~~id~v~I~ 74 (181)
T d1zh8a1 4 IRLGIVG-CGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPA---V---FDSYEELLE--SGLVDAVDLT 74 (181)
T ss_dssp EEEEEEC-CSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCE---E---ESCHHHHHH--SSCCSEEEEC
T ss_pred cEEEEEc-CCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhccccccc---e---eeeeecccc--ccccceeecc
Confidence 3788998 6899986 467776643 4665 46788888877665543221 1 133333221 2468988866
Q ss_pred cC
Q 028043 159 TG 160 (214)
Q Consensus 159 Ag 160 (214)
..
T Consensus 75 tp 76 (181)
T d1zh8a1 75 LP 76 (181)
T ss_dssp CC
T ss_pred cc
Confidence 54
|
| >d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella frigidimarina [TaxId: 56812]
Probab=81.48 E-value=0.52 Score=36.54 Aligned_cols=32 Identities=25% Similarity=0.305 Sum_probs=28.3
Q ss_pred EEEEEcCchHHHHHHHHHHHHCCCeEEEEEcCh
Q 028043 84 LVLVAGGSGGVGQLVVASLLSRNIKSRLLLRDP 116 (214)
Q Consensus 84 ~vlITGasggIG~~la~~L~~~G~~V~~~~r~~ 116 (214)
-|+|.| +|..|...|.+++++|.+|+++.+.+
T Consensus 21 DVvVIG-aG~aGl~AA~~aa~~G~~V~vlEK~~ 52 (317)
T d1qo8a2 21 QVLVVG-AGSAGFNASLAAKKAGANVILVDKAP 52 (317)
T ss_dssp EEEEEC-CSHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred CEEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 488998 78999999999999999999998753
|
| >d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Phenol hydroxylase species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]
Probab=81.24 E-value=0.57 Score=36.16 Aligned_cols=32 Identities=25% Similarity=0.492 Sum_probs=27.4
Q ss_pred EEEEcCchHHHHHHHHHHH-----HCCCeEEEEEcChh
Q 028043 85 VLVAGGSGGVGQLVVASLL-----SRNIKSRLLLRDPE 117 (214)
Q Consensus 85 vlITGasggIG~~la~~L~-----~~G~~V~~~~r~~~ 117 (214)
|+|.| +|-.|..+|..|+ ++|++|+++.|++.
T Consensus 10 V~IvG-aG~aGl~lA~~La~~~~~~~G~~v~vlEr~~~ 46 (360)
T d1pn0a1 10 VLIVG-AGPAGLMAARVLSEYVRQKPDLKVRIIDKRST 46 (360)
T ss_dssp EEEEC-CSHHHHHHHHHHHHHHHHSTTCCEEEECSSSS
T ss_pred EEEEC-cCHHHHHHHHHHHhcccccCCCcEEEEcCCCC
Confidence 88998 6889999999996 47999999998753
|
| >d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glucose-fructose oxidoreductase, N-terminal domain species: Zymomonas mobilis [TaxId: 542]
Probab=80.59 E-value=2.2 Score=31.28 Aligned_cols=74 Identities=12% Similarity=0.080 Sum_probs=44.3
Q ss_pred CEEEEEcCchHHHH-HHHHHHHHC-CCeEE-EEEcChhHHHHHhcccCCCCEEEEEecCCChhccchhhhCCCcEEEecc
Q 028043 83 KLVLVAGGSGGVGQ-LVVASLLSR-NIKSR-LLLRDPEKATTLFGKQDEETLQVCKGDTRNPKDLDPAIFEGVTHVICCT 159 (214)
Q Consensus 83 k~vlITGasggIG~-~la~~L~~~-G~~V~-~~~r~~~~~~~~~~~~~~~~~~~v~~Di~d~~~v~~~~~~~~d~li~~A 159 (214)
-+|.|.| .|.+|+ +.++.+... +.+|+ +++|++++.++..+++.-..... -..+|.+++-+ -.++|+|+-+.
T Consensus 34 iriaiIG-~G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~i~~~~~--~~~~d~~ell~--~~~iD~V~I~t 108 (221)
T d1h6da1 34 FGYAIVG-LGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKI--YDYSNFDKIAK--DPKIDAVYIIL 108 (221)
T ss_dssp EEEEEEC-CSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGE--ECSSSGGGGGG--CTTCCEEEECS
T ss_pred EEEEEEc-CcHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhccccccc--cccCchhhhcc--cccceeeeecc
Confidence 3788999 589996 566666553 67766 56889988888766543111100 11334343322 24689988765
Q ss_pred CC
Q 028043 160 GT 161 (214)
Q Consensus 160 g~ 161 (214)
..
T Consensus 109 p~ 110 (221)
T d1h6da1 109 PN 110 (221)
T ss_dssp CG
T ss_pred ch
Confidence 54
|
| >d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Thioredoxin reductase species: Escherichia coli [TaxId: 562]
Probab=80.27 E-value=0.46 Score=33.87 Aligned_cols=33 Identities=21% Similarity=0.266 Sum_probs=28.8
Q ss_pred CCEEEEEcCchHHHHHHHHHHHHCCCeEEEEEcC
Q 028043 82 SKLVLVAGGSGGVGQLVVASLLSRNIKSRLLLRD 115 (214)
Q Consensus 82 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~ 115 (214)
++.|+|.| +|-.|...|..+++.|.+|+++.|.
T Consensus 5 ~~dVvIIG-GGpaGl~AA~~~ar~g~~v~iie~~ 37 (190)
T d1trba1 5 HSKLLILG-SGPAGYTAAVYAARANLQPVLITGM 37 (190)
T ss_dssp EEEEEEEC-CSHHHHHHHHHHHTTTCCCEEECCS
T ss_pred CCcEEEEC-CCHHHHHHHHHHHHcCCceEEEEee
Confidence 46799999 6889999999999999999999764
|