Citrus Sinensis ID: 028083

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210----
Protein Sequence
MACVLTPATAIPVRHQVNRLSVNFTLTYTSSQFYQTTTVRKCRCNGQFLTTKAKMSVEGGILKKEPIRDSDKIETATNGKHNIKEIRDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG
Secondary Structure (PSIPRED)
ccccccccccccccccccEEEEEEEEcccccccEEEEEEEcccccccEEEcccEEEEEEEEEEEcccccccHHHHcccccccccccccccccEEEEEEEEcccHHHHHHHHHHccccEEcccccccccccEEEEEEcccEEEEEEEccccccccccccccccccEEEEEEccHHHHHHHHHHcccEEEEccccccEEEEEcccccEEEEEEEcc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccEEEEEEcccccccHHHHHcccEccccccccccccEEEEEEEEccEEEEEEccccccccHHHHccccccccccccEEEEHHHEEEHHcHHHHHHHHHHHccccccccccccccccccEEEEEcccEEEEEEcccccccccccccccccccEEEEEccHHHHHHHHHHccccEEEcccccEEEEEEcccccEEEEEEEcc
Coil and Loop (DISEMBL)
macvltpataipvrhqvnRLSVNFTLTytssqfyqtttvrkcrcngqflttkAKMSveggilkkepirdsdkietatngkhnikeiRDYGVVSVHHVGILCENLERSLEFYQNILGLeinearphdklpyrgaWLWVGAEMIhlmelpnpdplsgrpehggrdrhtciaIRDVSKLKMILDKAGisytlsksgrpaiftrdpdanaleftqvdg
Flexible Loop (DISEMBL)
macvltpataipvrhqvnRLSVNFTLTYTSsqfyqtttvrkcrcngqflttkakmsveggilkkepirdsdkietatngkhnikeiRDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGIsytlsksgrpaiftrdpdanaleftqvdg
Low Complexity Region (SEG)
MACVLTPATAIPVRHQVNRLSVNFtltytssqfyqtttVRKCRCNGQFLTTKAKMSVEGGILKKEPIRDSDKIETATNGKHNIKEIRDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG
Disordered region (IsUnstruct)
**CVLTPATAIPVRHQVNRLSVNFTLTYTSSQFYQTTTVRKCRCNGQFLTTKAKMSVEGGIL****************GKHNIKEIRDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMEL*****************HTCIAIRDVSKLKMILDKAGISYTLS************************
Disordered Region (DISOPRED)
********TAIPVRHQVNRLSVNFTLTYTSSQ*********CRCNGQFLTTKAKMSVEGGILKK***************************VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVD*
Disordered Region (DISEMBL)
MACVLTPATAIPVRHQVNRLSVNFTLTYTSSQFYQTTTVRKCRCNGQFLTTKAKMSVEGGILKKEPIRDSDKIETATNGKHNIKEIRDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS********DRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG
Disordered Region (DISPRO)
****LTPATAIPVRHQVNRLSVNFTLTYTSSQFYQTTTVRKCRCNGQFLTTKAKMSVEGGILKKEPIRDSDKIETATNGKHNIKEIRDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MACVLTPATAIPVRHQVNRLSVNFTLTYTSSQFYQTTTVRKCRCNGQFLTTKAKMSVEGGILKKEPIRDSDKIETATNGKHNIKEIRDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	214	2.2.26 [Sep-21-2011]
P45871	128	Uncharacterized protein Y	yes	no	0.551	0.921	0.298	9e-07
Q96PE7	176	Methylmalonyl-CoA epimera	yes	no	0.481	0.585	0.304	4e-05
Q9D1I5	178	Methylmalonyl-CoA epimera	yes	no	0.518	0.623	0.256	0.0004

>sp|P45871|YWKD_BACSU Uncharacterized protein YwkD OS=Bacillus subtilis (strain 168) GN=ywkD PE=4 SV=1

 Score = 53.9 bits (128), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 56/124 (45%), Gaps = 6/124 (4%)

Query: 93  SVHHVGILCENLERSLEFYQNILGLE-INEARPHDKLPYRGAWLWVGAEMIHLMELPNPD 151
           S+HH+ I+C + E+S  FY + LG + I E    ++  Y+      G+ +I L   P+P 
Sbjct: 5   SIHHIAIICSDYEKSKAFYVHKLGFQVIQETYREERGSYKLDLSLNGSYVIELFSFPDPP 64

Query: 152 PLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISY----TLSKSGRPAIFTRDPDANAL 207
               RPE  G  RH    +  + K    L + GI      T   +G+   F  DPD   L
Sbjct: 65  ERQTRPEAAGL-RHLAFTVGSLDKAVQELHEKGIETEPIRTDPLTGKRFTFFFDPDQLPL 123

Query: 208 EFTQ 211
           E  +
Sbjct: 124 ELYE 127

Bacillus subtilis (strain 168) (taxid: 224308)

>sp|Q96PE7|MCEE_HUMAN Methylmalonyl-CoA epimerase, mitochondrial OS=Homo sapiens GN=MCEE PE=1 SV=1

 Score = 48.5 bits (114), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 22/125 (17%)

Query: 94  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHL----MELPN 149
           ++HV I   +LE++  FY+NILG +++EA P   LP  G    V    ++L    MEL +
Sbjct: 48  LNHVAIAVPDLEKAAAFYKNILGAQVSEAVP---LPEHG----VSVVFVNLGNTKMELLH 100

Query: 150 P----DPLSG--RPEHGGRDRHTCIAIRDVSKLKMILDKAGI-----SYTLSKSGRPAIF 198
           P     P++G  +    G   H CI + +++   M L K  I        +   G+P IF
Sbjct: 101 PLGRDSPIAGFLQKNKAGGMHHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIF 160

Query: 199 TRDPD 203
               D
Sbjct: 161 LHPKD 165

Homo sapiens (taxid: 9606)

EC: 5

EC: .

EC: 1

EC: .

EC: 9

EC: 9

EC: .

EC: 1

>sp|Q9D1I5|MCEE_MOUSE Methylmalonyl-CoA epimerase, mitochondrial OS=Mus musculus GN=Mcee PE=2 SV=1

 Score = 44.7 bits (104), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 59/125 (47%), Gaps = 14/125 (11%)

Query: 94  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRG---AWLWVGAEMIHLME-LPN 149
           ++HV +   +LE++  FY+++LG +++E  P   LP  G    ++ +G   + L+  L +
Sbjct: 50  LNHVAVAVPDLEKASSFYRDVLGAQVSEVVP---LPEHGVSVVFVNLGNTKMELLHPLGS 106

Query: 150 PDPLSG--RPEHGGRDRHTCIAIRDVSKLKMILDKAGI-----SYTLSKSGRPAIFTRDP 202
             P++G  +    G   H CI + ++S   M L K  I        +   G+P IF    
Sbjct: 107 DSPITGFLQKNKAGGMHHVCIEVDNISAAVMDLKKKKIRSLSDEAKIGAHGKPVIFLHPK 166

Query: 203 DANAL 207
           D   +
Sbjct: 167 DCGGV 171

Mus musculus (taxid: 10090)

EC: 5

EC: .

EC: 1

EC: .

EC: 9

EC: 9

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	214
388493084	200	unknown [Lotus japonicus]	0.925	0.99	0.649	7e-74
297738629	199	unnamed protein product [Vitis vinifera]	0.929	1.0	0.640	2e-72
147789730	205	hypothetical protein VITISV_016330 [Viti	0.929	0.970	0.640	4e-72
225444850	205	PREDICTED: uncharacterized protein ywkD-	0.929	0.970	0.640	4e-72
359807103	206	uncharacterized protein LOC100805881 [Gl	0.929	0.966	0.641	2e-71
449489903	206	PREDICTED: uncharacterized LOC101203815	0.934	0.970	0.65	3e-71
356547897	209	PREDICTED: uncharacterized protein LOC10	0.929	0.952	0.640	2e-70
15242020	197	Lactoylglutathione lyase / glyoxalase I	0.911	0.989	0.640	2e-69
297796591	196	lactoylglutathione lyase family protein	0.887	0.969	0.637	1e-68
449452528	175	PREDICTED: uncharacterized protein LOC10	0.780	0.954	0.709	2e-67

>gi|388493084|gb|AFK34608.1| unknown [Lotus japonicus]

 Score =  282 bits (721), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 139/214 (64%), Positives = 163/214 (76%), Gaps = 16/214 (7%)

Query: 1   MACVL-TPATAIPVRHQVNRLSVNFTLTYTSSQFYQTTTVRKCRCNGQFLTTKAKMSVEG 59
           MA +L  P+   P+  ++N +S +       S+FY  + V+  RC    ++ KA+++VEG
Sbjct: 1   MASLLRAPSFTSPLHQKLNYVSFSPLTMNLRSKFYHAS-VKNGRCYVPSMSIKAQVAVEG 59

Query: 60  GILKKEPIRDSDKIETATNGKHNIKEIRDYGVVSVHHVGILCENLERSLEFYQNILGLEI 119
            +L KE                 I E  DYGVVS+HHVGILCENLER L+FYQN+LGLEI
Sbjct: 60  DVLDKE--------------SEPINEGSDYGVVSIHHVGILCENLERPLDFYQNVLGLEI 105

Query: 120 NEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMI 179
           NEARPHDKLPYRGAWLWVG+EMIHLMELPNPDPL+GRP+HGGRDRHTCIAIRDVSKLK I
Sbjct: 106 NEARPHDKLPYRGAWLWVGSEMIHLMELPNPDPLTGRPQHGGRDRHTCIAIRDVSKLKAI 165

Query: 180 LDKAGISYTLSKSGRPAIFTRDPDANALEFTQVD 213
           LDKAGISYTLS+SGRPAIFTRDPDANALEFTQ+D
Sbjct: 166 LDKAGISYTLSRSGRPAIFTRDPDANALEFTQID 199

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297738629|emb|CBI27874.3| unnamed protein product [Vitis vinifera]

 Score =  277 bits (708), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 137/214 (64%), Positives = 156/214 (72%), Gaps = 15/214 (7%)

Query: 1   MACVLTPATAIPVRHQVNRLSVNFTLTYTSSQFYQTTTVRKCRCNGQFLTTKAKMSVEGG 60
           MA +L P    P++H+VNR S+N T++          TVR    +G  L T AKMSVEG 
Sbjct: 1   MASLLNPYPTSPLQHKVNRFSLN-TISRNLLSNRNQLTVRNGPTHGHRLITTAKMSVEGD 59

Query: 61  ILKKEPIRDSDKIETATNGKHNIKEIRDYGVVSVHHVGILCENLERSLEFYQNILGLEIN 120
           ++ KE I    K               D G+VS+HHVGILCENLERS +FY N+LG  +N
Sbjct: 60  VMVKEAISTDQK--------------NDIGIVSLHHVGILCENLERSFDFYHNLLGFPVN 105

Query: 121 EARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMIL 180
           EARP+DKLPYRGAWLWVG+EMIHLMELPNPDPL+GRPEHGGRDRH CIAIRDVSKLK IL
Sbjct: 106 EARPNDKLPYRGAWLWVGSEMIHLMELPNPDPLTGRPEHGGRDRHACIAIRDVSKLKEIL 165

Query: 181 DKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG 214
           D+AGI YTLSKSGRPAIFTRDPDANALEF QVD 
Sbjct: 166 DEAGIPYTLSKSGRPAIFTRDPDANALEFVQVDA 199

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147789730|emb|CAN63060.1| hypothetical protein VITISV_016330 [Vitis vinifera]

 Score =  276 bits (706), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 137/214 (64%), Positives = 156/214 (72%), Gaps = 15/214 (7%)

Query: 1   MACVLTPATAIPVRHQVNRLSVNFTLTYTSSQFYQTTTVRKCRCNGQFLTTKAKMSVEGG 60
           MA +L P    P++H+VNR S+N T++          TVR    +G  L T AKMSVEG 
Sbjct: 7   MASLLNPYPTSPLQHKVNRFSLN-TISRNLLSNRNQLTVRNGPTHGHRLITTAKMSVEGD 65

Query: 61  ILKKEPIRDSDKIETATNGKHNIKEIRDYGVVSVHHVGILCENLERSLEFYQNILGLEIN 120
           ++ KE I    K               D G+VS+HHVGILCENLERS +FY N+LG  +N
Sbjct: 66  VMVKEAISTDQK--------------NDIGIVSLHHVGILCENLERSFDFYHNLLGFPVN 111

Query: 121 EARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMIL 180
           EARP+DKLPYRGAWLWVG+EMIHLMELPNPDPL+GRPEHGGRDRH CIAIRDVSKLK IL
Sbjct: 112 EARPNDKLPYRGAWLWVGSEMIHLMELPNPDPLTGRPEHGGRDRHACIAIRDVSKLKEIL 171

Query: 181 DKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG 214
           D+AGI YTLSKSGRPAIFTRDPDANALEF QVD 
Sbjct: 172 DEAGIPYTLSKSGRPAIFTRDPDANALEFVQVDA 205

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225444850|ref|XP_002281014.1| PREDICTED: uncharacterized protein ywkD-like [Vitis vinifera]

 Score =  276 bits (706), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 137/214 (64%), Positives = 156/214 (72%), Gaps = 15/214 (7%)

Query: 1   MACVLTPATAIPVRHQVNRLSVNFTLTYTSSQFYQTTTVRKCRCNGQFLTTKAKMSVEGG 60
           MA +L P    P++H+VNR S+N T++          TVR    +G  L T AKMSVEG 
Sbjct: 7   MASLLNPYPTSPLQHKVNRFSLN-TISRNLLSNRNQLTVRNGPTHGHRLITTAKMSVEGD 65

Query: 61  ILKKEPIRDSDKIETATNGKHNIKEIRDYGVVSVHHVGILCENLERSLEFYQNILGLEIN 120
           ++ KE I    K               D G+VS+HHVGILCENLERS +FY N+LG  +N
Sbjct: 66  VMVKEAISTDQK--------------NDIGIVSLHHVGILCENLERSFDFYHNLLGFPVN 111

Query: 121 EARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMIL 180
           EARP+DKLPYRGAWLWVG+EMIHLMELPNPDPL+GRPEHGGRDRH CIAIRDVSKLK IL
Sbjct: 112 EARPNDKLPYRGAWLWVGSEMIHLMELPNPDPLTGRPEHGGRDRHACIAIRDVSKLKEIL 171

Query: 181 DKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG 214
           D+AGI YTLSKSGRPAIFTRDPDANALEF QVD 
Sbjct: 172 DEAGIPYTLSKSGRPAIFTRDPDANALEFVQVDA 205

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359807103|ref|NP_001241602.1| uncharacterized protein LOC100805881 [Glycine max] gi|255638057|gb|ACU19343.1| unknown [Glycine max]

 Score =  274 bits (701), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 138/215 (64%), Positives = 163/215 (75%), Gaps = 16/215 (7%)

Query: 1   MACVL-TPATAIPVRHQVNRLSVNFTLTYTSSQFYQTTTVRKCRCNGQFLTTKAKMSVEG 59
           MA +L +P+   P+  ++N +S +   T   S+F + + VR  R +   LT K++ +VEG
Sbjct: 7   MASLLKSPSFLSPLNQKLNYVSFSPMTTNLQSKFCRAS-VRNGRWHVPSLTIKSQAAVEG 65

Query: 60  GILKKEPIRDSDKIETATNGKHNIKEIRDYGVVSVHHVGILCENLERSLEFYQNILGLEI 119
            +L+KE +              +I E  DYGVV +HHVGILCENLERSLEFYQN+LGL+I
Sbjct: 66  DVLEKESV--------------SINEESDYGVVCMHHVGILCENLERSLEFYQNVLGLKI 111

Query: 120 NEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMI 179
           NEARPHDKLPYRGAWLWVG+EMIHLMELPNPDPL+GR +HGGRDRHTCIAIRDVSKLK I
Sbjct: 112 NEARPHDKLPYRGAWLWVGSEMIHLMELPNPDPLTGRAQHGGRDRHTCIAIRDVSKLKAI 171

Query: 180 LDKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG 214
            DKAGI YTLS SGRPAIF RDPDANALEFTQVDG
Sbjct: 172 FDKAGIPYTLSHSGRPAIFARDPDANALEFTQVDG 206

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449489903|ref|XP_004158454.1| PREDICTED: uncharacterized LOC101203815 [Cucumis sativus]

 Score =  273 bits (698), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 143/220 (65%), Positives = 162/220 (73%), Gaps = 20/220 (9%)

Query: 1   MACVL---TPATAIPVRHQVNRLSVNFTLTYTSSQFYQTTTVRK---CRCNGQFLTTKAK 54
           MA +L   TP + I +R +VN    NF+   T+S F +   + +   C  +G   TT+AK
Sbjct: 1   MASLLSLSTPPSPINLRRKVNL--PNFSSISTNSSFKKHGKIERVGGCGYHGSCFTTRAK 58

Query: 55  MSVEGGILKKEPIRDSDKIETATNGKHNIKEIRDYGVVSVHHVGILCENLERSLEFYQNI 114
             +E  +L+K    D + IE        I    DYG V VHHVG+LCENLERSL FY NI
Sbjct: 59  GGIEQDVLEK----DKEPIE--------IDVENDYGAVGVHHVGVLCENLERSLHFYLNI 106

Query: 115 LGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVS 174
           LGL+INEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL+GRPEHGGRDRHTC+ IRDVS
Sbjct: 107 LGLQINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLTGRPEHGGRDRHTCLGIRDVS 166

Query: 175 KLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG 214
           KLK ILDKAGI YTLSKSGRPAIFTRDPDANALEFTQVDG
Sbjct: 167 KLKAILDKAGIPYTLSKSGRPAIFTRDPDANALEFTQVDG 206

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356547897|ref|XP_003542341.1| PREDICTED: uncharacterized protein LOC100788142 [Glycine max]

 Score =  270 bits (691), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 137/214 (64%), Positives = 161/214 (75%), Gaps = 15/214 (7%)

Query: 1   MACVL-TPATAIPVRHQVNRLSVNFTLTYTSSQFYQTTTVRKCRCNGQFLTTKAKMSVEG 59
           MA +L  P+   P+  ++N    +F+     S+FY  + VR  R N   +T KA+ +VEG
Sbjct: 9   MAFLLKAPSFLPPLNQKLNYTHKSFSPINLQSKFYHAS-VRNGRWNVPSMTIKAQAAVEG 67

Query: 60  GILKKEPIRDSDKIETATNGKHNIKEIRDYGVVSVHHVGILCENLERSLEFYQNILGLEI 119
            +L  E        E+       + E  DYGVV +HHVGILCENLERSL+FYQN+LGL+I
Sbjct: 68  DVLLDE--------ESIC-----VNEESDYGVVCMHHVGILCENLERSLDFYQNVLGLKI 114

Query: 120 NEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMI 179
           NEARPH+KLPYRGAWLWVG+EMIHLMELPNPDPL+GRP+HGGRDRHTCIAIRDVSKLK I
Sbjct: 115 NEARPHNKLPYRGAWLWVGSEMIHLMELPNPDPLTGRPQHGGRDRHTCIAIRDVSKLKAI 174

Query: 180 LDKAGISYTLSKSGRPAIFTRDPDANALEFTQVD 213
            DKAGI+YTLS SGRPAIFTRDPDANALEFTQVD
Sbjct: 175 FDKAGIAYTLSHSGRPAIFTRDPDANALEFTQVD 208

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15242020|ref|NP_200514.1| Lactoylglutathione lyase / glyoxalase I family protein [Arabidopsis thaliana] gi|8777444|dbj|BAA97034.1| unnamed protein product [Arabidopsis thaliana] gi|21594695|gb|AAM66034.1| unknown [Arabidopsis thaliana] gi|88193792|gb|ABD42985.1| At5g57040 [Arabidopsis thaliana] gi|110742698|dbj|BAE99260.1| hypothetical protein [Arabidopsis thaliana] gi|332009455|gb|AED96838.1| Lactoylglutathione lyase / glyoxalase I family protein [Arabidopsis thaliana]

 Score =  267 bits (683), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 137/214 (64%), Positives = 161/214 (75%), Gaps = 19/214 (8%)

Query: 1   MACVLTPATA-IPVRHQVNRLSVNFTLTYTSSQF-YQTTTVRKCRCNGQFLTTKAKMSVE 58
           MA +  P++A + +R +V  +  N +   T  +F +Q  +VRK R N +F + KAK   +
Sbjct: 1   MASIFRPSSASLDLRPKV--ICTNLS---TKERFEFQKKSVRKERINVRFYSLKAK--AQ 53

Query: 59  GGILKKEPIRDSDKIETATNGKHNIKEIRDYGVVSVHHVGILCENLERSLEFYQNILGLE 118
           G  ++   +    ++   T          DYGVV VHHVG+LCENLERSLEFYQNILGLE
Sbjct: 54  GSSIEGISVVQEKELNNKT----------DYGVVGVHHVGLLCENLERSLEFYQNILGLE 103

Query: 119 INEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKM 178
           INEARPHDKLPYRGAWLWVG+EMIHLMELPNPDPL+GRPEHGGRDRH CIAIRDVS LK 
Sbjct: 104 INEARPHDKLPYRGAWLWVGSEMIHLMELPNPDPLTGRPEHGGRDRHACIAIRDVSNLKE 163

Query: 179 ILDKAGISYTLSKSGRPAIFTRDPDANALEFTQV 212
           ILDKAGI+YT+SKSGRPAIFTRDPDANALEFTQV
Sbjct: 164 ILDKAGIAYTMSKSGRPAIFTRDPDANALEFTQV 197

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297796591|ref|XP_002866180.1| lactoylglutathione lyase family protein [Arabidopsis lyrata subsp. lyrata] gi|297312015|gb|EFH42439.1| lactoylglutathione lyase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  265 bits (676), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 139/218 (63%), Positives = 159/218 (72%), Gaps = 28/218 (12%)

Query: 1   MACVLTPATAIPVRHQV--NRLSVNFTLTYTSSQF-YQTTTVRKCRCNGQFLT---TKAK 54
           MA +  P+ +  +R +V   +LS       T  +F +Q  ++RK R N +F +    KA+
Sbjct: 1   MASIFRPSASFDLRPKVICKKLS-------TRERFEFQKKSLRKERINVRFCSLKANKAQ 53

Query: 55  MSVEGGILKKEPIRDSDKIETATNGKHNIKEIRDYGVVSVHHVGILCENLERSLEFYQNI 114
            S+EG             I      + N K   DYGVV VHHVG+LCENLERSLEFYQNI
Sbjct: 54  GSIEG-------------ISVVEEKQLNNKT--DYGVVGVHHVGLLCENLERSLEFYQNI 98

Query: 115 LGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVS 174
           LGLEINEARPHDKLPYRGAWLWVG+EMIHLMELPNPDPL+GRPEHGGRDRH CIAIRDVS
Sbjct: 99  LGLEINEARPHDKLPYRGAWLWVGSEMIHLMELPNPDPLTGRPEHGGRDRHACIAIRDVS 158

Query: 175 KLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQV 212
            LK ILDKAGI+YT+SKSGRPAIFTRDPDANALEFTQV
Sbjct: 159 NLKEILDKAGIAYTMSKSGRPAIFTRDPDANALEFTQV 196

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449452528|ref|XP_004144011.1| PREDICTED: uncharacterized protein LOC101203815 [Cucumis sativus]

 Score =  261 bits (666), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 127/179 (70%), Positives = 139/179 (77%), Gaps = 12/179 (6%)

Query: 36  TTTVRKCRCNGQFLTTKAKMSVEGGILKKEPIRDSDKIETATNGKHNIKEIRDYGVVSVH 95
              + +   +G   TT+AK  +E  +L+K    D + IE             DYG V VH
Sbjct: 9   VVVIMEVALHGSCFTTRAKGGIEQDVLEK----DKEPIEIDVE--------NDYGAVGVH 56

Query: 96  HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG 155
           HVG+LCENLERSL FY NILGL+INEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL+G
Sbjct: 57  HVGVLCENLERSLHFYLNILGLQINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLTG 116

Query: 156 RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG 214
           RPEHGGRDRHTC+ IRDVSKLK ILDKAGI YTLSKSGRPAIFTRDPDANALEFTQVDG
Sbjct: 117 RPEHGGRDRHTCLGIRDVSKLKAILDKAGIPYTLSKSGRPAIFTRDPDANALEFTQVDG 175

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	214
TAIR|locus:2164600	197	AT5G57040 "AT5G57040" [Arabido	0.757	0.822	0.729	6.9e-63
TAIR|locus:2016254	167	GLYI7 "AT1G80160" [Arabidopsis	0.565	0.724	0.304	1.9e-12
TAIR|locus:2037728	174	GLYI4 "AT1G15380" [Arabidopsis	0.565	0.695	0.304	1e-11
TIGR_CMR|BA_0607	128	BA_0607 "glyoxylase family pro	0.546	0.914	0.344	1.3e-11
TAIR|locus:2057522	184	GLYI8 "AT2G28420" [Arabidopsis	0.542	0.630	0.296	2.4e-08
UNIPROTKB|Q9KL58	127	VC_A0890 "Glyoxylase I family	0.537	0.905	0.296	1.2e-07
TIGR_CMR|VC_A0890	127	VC_A0890 "glyoxylase I family	0.537	0.905	0.296	1.2e-07
TIGR_CMR|CPS_2825	128	CPS_2825 "glyoxylase family pr	0.546	0.914	0.284	4.7e-07
UNIPROTKB|E2REA1	189	MCEE "Uncharacterized protein"	0.514	0.582	0.285	8e-06
UNIPROTKB|Q96PE7	176	MCEE "Methylmalonyl-CoA epimer	0.514	0.625	0.293	1.7e-05

TAIR|locus:2164600 AT5G57040 "AT5G57040" [Arabidopsis thaliana (taxid:3702)]

 Score = 642 (231.1 bits), Expect = 6.9e-63, P = 6.9e-63
 Identities = 127/174 (72%), Positives = 140/174 (80%)

Query:    39 VRKCRCNGQFLTTKAKMSVEGGILKKEPIRDSDKIETATNGKHNIKEIRDYGVVSVHHVG 98
             VRK R N +F + KAK   +G  ++   +    ++   T          DYGVV VHHVG
Sbjct:    36 VRKERINVRFYSLKAK--AQGSSIEGISVVQEKELNNKT----------DYGVVGVHHVG 83

Query:    99 ILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPE 158
             +LCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG+EMIHLMELPNPDPL+GRPE
Sbjct:    84 LLCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGSEMIHLMELPNPDPLTGRPE 143

Query:   159 HGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQV 212
             HGGRDRH CIAIRDVS LK ILDKAGI+YT+SKSGRPAIFTRDPDANALEFTQV
Sbjct:   144 HGGRDRHACIAIRDVSNLKEILDKAGIAYTMSKSGRPAIFTRDPDANALEFTQV 197

GO:0003824 "catalytic activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

GO:0009507 "chloroplast" evidence=IDA

TAIR|locus:2016254 GLYI7 "AT1G80160" [Arabidopsis thaliana (taxid:3702)]

 Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 39/128 (30%), Positives = 64/128 (50%)

Query:    91 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 150
             + S++H+ +LC ++E S+ FYQN+LG  +   RP D   + GAWL+     IHL++ P P
Sbjct:    11 IKSLNHISLLCRSVEESISFYQNVLGF-LPIRRP-DSFDFDGAWLFGHGIGIHLLQSPEP 68

Query:   151 DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYT---LSKSGRPA--IFTRDPDAN 205
             + L  + E   +D H       +  ++  L +  I Y    + + G     +F  DPDA 
Sbjct:    69 EKLLKKTEINPKDNHISFQCESMEAVEKKLKEMEIEYVRAVVEEGGIQVDQLFFHDPDAF 128

Query:   206 ALEFTQVD 213
              +E    D
Sbjct:   129 MIEICNCD 136

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0009414 "response to water deprivation" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

GO:0046482 "para-aminobenzoic acid metabolic process" evidence=RCA

TAIR|locus:2037728 GLYI4 "AT1G15380" [Arabidopsis thaliana (taxid:3702)]

 Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
 Identities = 39/128 (30%), Positives = 63/128 (49%)

Query:    91 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 150
             + S++HV +LC +++ S+ FYQ +LG  I   RP + L + GAWL+     IHL+  P P
Sbjct:    11 LTSLNHVSVLCRSVDESMNFYQKVLGF-IPIRRP-ESLNFEGAWLFGHGIGIHLLCAPEP 68

Query:   151 DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYT--LSKSGR---PAIFTRDPDAN 205
             + L  +     +D H       +  ++  L++ GI Y   L + G      +F  DPD  
Sbjct:    69 EKLPKKTAINPKDNHISFQCESMGVVEKKLEEMGIDYVRALVEEGGIQVDQLFFHDPDGF 128

Query:   206 ALEFTQVD 213
              +E    D
Sbjct:   129 MIEICNCD 136

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0009744 "response to sucrose stimulus" evidence=RCA

GO:0009750 "response to fructose stimulus" evidence=RCA

TIGR_CMR|BA_0607 BA_0607 "glyoxylase family protein" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 43/125 (34%), Positives = 61/125 (48%)

Query:    94 VHHVGILCENLERSLEFYQNILGLE-INEARPHDKLPYRGAWLWVGAE-MIHLMELPNPD 151
             VHHV I+C N E S +FY  ILG + INE    ++  Y+   L VG E  I L   PNP 
Sbjct:     6 VHHVAIICSNYEVSKDFYTRILGFKAINEVYRKERDSYK-LDLCVGKEYQIELFSFPNPP 64

Query:   152 PLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANAL 207
                  PE  G  RH   A+ ++ +    L + G+     +    +G+  +F +DPD   L
Sbjct:    65 KRPSFPEAAGL-RHLAFAVTNIEEAVQDLSQCGVETEAIRIDEITGKKFVFFQDPDGLPL 123

Query:   208 EFTQV 212
             E  +V
Sbjct:   124 ELYEV 128

GO:0003824 "catalytic activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

TAIR|locus:2057522 GLYI8 "AT2G28420" [Arabidopsis thaliana (taxid:3702)]

 Score = 132 (51.5 bits), Expect = 2.4e-08, P = 2.4e-08
 Identities = 37/125 (29%), Positives = 61/125 (48%)

Query:    91 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 150
             +++++HV  LC+++++SLEFY  +LG  +   RP     + GAWL+     IHL++  + 
Sbjct:    18 LMALNHVSRLCKDVKKSLEFYTKVLGF-VEIERPAS-FDFDGAWLFNYGVGIHLVQAKDQ 75

Query:   151 DPLSGRPEH-GGRDRHTCIAIRDVSKLKMILDKAGISY---TLSKSGRPAI---FTRDPD 203
             D L    +H    D H      D+  L+  L +  + Y   T+      AI   F  DPD
Sbjct:    76 DKLPSDTDHLDPMDNHISFQCEDMEALEKRLKEVKVKYIKRTVGDEKDAAIDQLFFNDPD 135

Query:   204 ANALE 208
                +E
Sbjct:   136 GFMVE 140

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0009845 "seed germination" evidence=RCA

GO:0016114 "terpenoid biosynthetic process" evidence=RCA

GO:0019915 "lipid storage" evidence=RCA

GO:0050826 "response to freezing" evidence=RCA

UNIPROTKB|Q9KL58 VC_A0890 "Glyoxylase I family protein" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 121 (47.7 bits), Expect = 1.2e-07, P = 1.2e-07
 Identities = 37/125 (29%), Positives = 52/125 (41%)

Query:    94 VHHVGILCENLERSLEFYQNILGLEI---NEARPHDKLPYRGAWLWVGAEMIHLMELPNP 150
             +HH  I+C +  RS  FY  ILGL +   N     D   Y+          I L   P  
Sbjct:     5 IHHAAIICSDYPRSKAFYTEILGLRVLAENYRAARDS--YKLDLALPDGSQIELFSFPKA 62

Query:   151 DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANA 206
                   PE  G  RH    + DV+++K  L++ G+S    +    +G+   F  DPD   
Sbjct:    63 PERPSFPEAQGL-RHLAFVVDDVAEIKAQLEQQGVSVEPIRIDEYTGKAYTFFADPDGLP 121

Query:   207 LEFTQ 211
             LE  Q
Sbjct:   122 LELYQ 126

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|VC_A0890 VC_A0890 "glyoxylase I family protein" [Vibrio cholerae O1 biovar El Tor (taxid:686)]

 Score = 121 (47.7 bits), Expect = 1.2e-07, P = 1.2e-07
 Identities = 37/125 (29%), Positives = 52/125 (41%)

Query:    94 VHHVGILCENLERSLEFYQNILGLEI---NEARPHDKLPYRGAWLWVGAEMIHLMELPNP 150
             +HH  I+C +  RS  FY  ILGL +   N     D   Y+          I L   P  
Sbjct:     5 IHHAAIICSDYPRSKAFYTEILGLRVLAENYRAARDS--YKLDLALPDGSQIELFSFPKA 62

Query:   151 DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANA 206
                   PE  G  RH    + DV+++K  L++ G+S    +    +G+   F  DPD   
Sbjct:    63 PERPSFPEAQGL-RHLAFVVDDVAEIKAQLEQQGVSVEPIRIDEYTGKAYTFFADPDGLP 121

Query:   207 LEFTQ 211
             LE  Q
Sbjct:   122 LELYQ 126

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|CPS_2825 CPS_2825 "glyoxylase family protein" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 116 (45.9 bits), Expect = 4.7e-07, P = 4.7e-07
 Identities = 35/123 (28%), Positives = 53/123 (43%)

Query:    94 VHHVGILCENLERSLEFYQNILGLEI-NEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 152
             +HHV I+C + E+S +FY  ILG +I  E    D+  ++          I L   P+   
Sbjct:     5 IHHVAIICSDYEKSKDFYTRILGFKIIAENYRADRDSFKLDLALADGTQIELFSFPDAPK 64

Query:   153 LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGI---SYTLSK-SGRPAIFTRDPDANALE 208
                 PE  G  RH    + +V  +   L   G+   S  + + +G+   F  DPD   LE
Sbjct:    65 RPSFPEAQGL-RHLAFNVENVEAVSQYLTNLGVDVESIRVDEYTGKQFTFFSDPDGLPLE 123

Query:   209 FTQ 211
               Q
Sbjct:   124 LYQ 126

GO:0003824 "catalytic activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

UNIPROTKB|E2REA1 MCEE "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 118 (46.6 bits), Expect = 8.0e-06, P = 8.0e-06
 Identities = 36/126 (28%), Positives = 62/126 (49%)

Query:    94 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGA---WLWVGAEMIHLME-LPN 149
             ++H+ +   +LE++  FY+NILG +I+E  P   LP  G    ++ +G   + L+  L N
Sbjct:    61 LNHIAVAVPDLEKAKAFYKNILGAQISEVVP---LPEHGVSVVFVNLGNTKMELLHPLGN 117

Query:   150 PDPLSG--RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS------GRPAIFTRD 201
               P++G  +    G   H CI + D++   M L +  I  +LS+       G+P IF   
Sbjct:   118 DSPIAGFLQKNKAGGMHHICIEVDDINAAVMDLKEKNIR-SLSEETKIGAHGKPVIFLHP 176

Query:   202 PDANAL 207
              D   +
Sbjct:   177 KDCGGI 182

GO:0046491 "L-methylmalonyl-CoA metabolic process" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0004493 "methylmalonyl-CoA epimerase activity" evidence=IEA

UNIPROTKB|Q96PE7 MCEE "Methylmalonyl-CoA epimerase, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 114 (45.2 bits), Expect = 1.7e-05, P = 1.7e-05
 Identities = 37/126 (29%), Positives = 62/126 (49%)

Query:    94 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGA---WLWVGAEMIHLME-LPN 149
             ++HV I   +LE++  FY+NILG +++EA P   LP  G    ++ +G   + L+  L  
Sbjct:    48 LNHVAIAVPDLEKAAAFYKNILGAQVSEAVP---LPEHGVSVVFVNLGNTKMELLHPLGR 104

Query:   150 PDPLSG--RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS------GRPAIFTRD 201
               P++G  +    G   H CI + +++   M L K  I  +LS+       G+P IF   
Sbjct:   105 DSPIAGFLQKNKAGGMHHICIEVDNINAAVMDLKKKKIR-SLSEEVKIGAHGKPVIFLHP 163

Query:   202 PDANAL 207
              D   +
Sbjct:   164 KDCGGV 169

GO:0046491 "L-methylmalonyl-CoA metabolic process" evidence=IDA

GO:0004493 "methylmalonyl-CoA epimerase activity" evidence=IDA

GO:0005759 "mitochondrial matrix" evidence=TAS

GO:0006635 "fatty acid beta-oxidation" evidence=TAS

GO:0019626 "short-chain fatty acid catabolic process" evidence=TAS

GO:0044255 "cellular lipid metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.13.11.39	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00016519001 SubName- Full=Chromosome chr11 scaffold_13, whole genome shotgun sequence; (199 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	214
cd07245	114	cd07245, Glo_EDI_BRP_like_9, This conserved domain	2e-35
pfam00903	120	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resist	5e-13
cd06587	110	cd06587, Glo_EDI_BRP_like, This domain superfamily	3e-12
cd08354	122	cd08354, Glo_EDI_BRP_like_13, This conserved domai	7e-12
COG0346	138	COG0346, GloA, Lactoylglutathione lyase and relate	1e-11
cd08352	125	cd08352, Glo_EDI_BRP_like_1, This conserved domain	2e-11
pfam12681	109	pfam12681, Glyoxalase_2, Glyoxalase-like domain	2e-08
PRK11478	129	PRK11478, PRK11478, putative lyase; Provisional	4e-08
cd08346	126	cd08346, PcpA_N_like, N-terminal domain of Sphingo	1e-07
cd07253	125	cd07253, Glo_EDI_BRP_like_2, This conserved domain	2e-06
cd07233	121	cd07233, Glyoxalase_I, Glyoxalase I catalyzes the	7e-06
pfam13669	110	pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resi	1e-05
TIGR03081	128	TIGR03081, metmalonyl_epim, methylmalonyl-CoA epim	2e-05
cd07255	125	cd07255, Glo_EDI_BRP_like_12, This conserved domai	2e-04
cd07249	128	cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)	8e-04
cd08357	125	cd08357, Glo_EDI_BRP_like_18, This conserved domai	0.002
cd07242	128	cd07242, Glo_EDI_BRP_like_6, This conserved domain	0.002
cd07244	121	cd07244, FosA, FosA, a Fosfomycin resistance prote	0.003

>gnl|CDD|176669 cd07245, Glo_EDI_BRP_like_9, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score =  121 bits (305), Expect = 2e-35
 Identities = 44/120 (36%), Positives = 59/120 (49%), Gaps = 10/120 (8%)

Query: 94  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDP 152
           + HV +   +LE S  FY ++LGLE     P     + GAWL+ G    +HL+E   PD 
Sbjct: 1   LDHVALRVPDLEASRAFYTDVLGLEEGPRPPF---LFPGAWLYAGDGPQLHLIEEDPPDA 57

Query: 153 LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS---GRPAIFTRDPDANALEF 209
           L   PE  GRD H    + D+   +  L  AG+ YT S     G   +F RDPD N +E 
Sbjct: 58  L---PEGPGRDDHIAFRVDDLDAFRARLKAAGVPYTESDVPGDGVRQLFVRDPDGNRIEL 114

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases. Length = 114

>gnl|CDD|216182 pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 62.8 bits (153), Expect = 5e-13
 Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 5/120 (4%)

Query: 94  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 153
           + HV +   +LE+SL+FY ++LG ++ E     + P R A+   G  ++ L+    P P 
Sbjct: 2   IDHVALRVGDLEKSLDFYTDVLGFKLVEEVDDGEGPLRSAFFTAGGRVLELLLNETPPPA 61

Query: 154 SGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEF 209
           +              ++ DV      L  AG+           G    + RDPD N +E 
Sbjct: 62  AAGFGGHHI-AFIAFSVDDVDAAYDRLKAAGVEIVREPGRHGWGGRYSYFRDPDGNLIEL 120

Length = 120

>gnl|CDD|211348 cd06587, Glo_EDI_BRP_like, This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

 Score = 60.5 bits (147), Expect = 3e-12
 Identities = 33/118 (27%), Positives = 48/118 (40%), Gaps = 12/118 (10%)

Query: 96  HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG 155
           HVG+   +LE ++ FY+++LG E+      D      A+L +G   + L E   P     
Sbjct: 1   HVGLTVPDLEAAVAFYEDVLGFEV---LERDGGGAEFAFLRLGGTRLELFEGDEP----- 52

Query: 156 RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANALEF 209
            P  GG   H    + DV      L  AG+         P      + RDPD N +E 
Sbjct: 53  APPSGGGGVHLAFEVDDVDAAVERLKAAGVEILGGPREEPWGGRVAYFRDPDGNLIEL 110

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases. Length = 110

>gnl|CDD|176702 cd08354, Glo_EDI_BRP_like_13, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 60.0 bits (146), Expect = 7e-12
 Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 13/116 (11%)

Query: 102 ENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPLSGR-PEH 159
           ++LE +  FY+++LGLE        K   R A+ WVG   M+ L +        G  P H
Sbjct: 9   DDLEAAEAFYEDVLGLE-----LMLKEDRRLAFFWVGGRGMLLLFDPGATSTPGGEIPPH 63

Query: 160 GGRDR-HTCIAIR--DVSKLKMILDKAGI---SYTLSKSGRPAIFTRDPDANALEF 209
           GG    H   AI   ++++ +  L+  G+   S      G  +++ RDPD N LE 
Sbjct: 64  GGSGPGHFAFAIPAEELAEWEAHLEAKGVAIESEVQWPRGGRSLYFRDPDGNLLEL 119

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 122

>gnl|CDD|223423 COG0346, GloA, Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

 Score = 59.8 bits (144), Expect = 1e-11
 Identities = 31/136 (22%), Positives = 48/136 (35%), Gaps = 18/136 (13%)

Query: 94  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMEL------ 147
           +HHV +   +LE S++FY ++LGL + +   ++     G  L          EL      
Sbjct: 3   IHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFFGF 62

Query: 148 -------PNPDPLSGRPEHGGRDRHTCIAIRD---VSKLKMILDKAGISYTLSKSGRPA- 196
                     D   G P       H    + D          LD  G+   L + GR   
Sbjct: 63  EGRAGTGFVGDVALGVPGGDLGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEPGRGGV 122

Query: 197 -IFTRDPDANALEFTQ 211
            ++ RDPD   +E   
Sbjct: 123 HVYFRDPDGILIELAT 138

Length = 138

>gnl|CDD|211358 cd08352, Glo_EDI_BRP_like_1, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 58.9 bits (143), Expect = 2e-11
 Identities = 39/128 (30%), Positives = 53/128 (41%), Gaps = 14/128 (10%)

Query: 93  SVHHVGILCENLERSLEFYQNILGLEI-NEARPHDKLPYRGAWLWVGAEMIHLMELPNPD 151
            +HHV I+C +  RS EFY  +LGL +  E    ++  Y+      G   I L   PNP 
Sbjct: 3   GIHHVAIICSDYARSKEFYVEVLGLTLIRETYRPERKSYKLDLALNGEYQIELFSFPNPP 62

Query: 152 PLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGIS--------YTLSKSGRPAIFTRDPD 203
           P    PE  G  RH   A+ D+      L   G+         +T    G+   F  DPD
Sbjct: 63  PRPSYPEACGL-RHLAFAVEDIEAAVAELKAHGVEVEPIRVDEFT----GKRFTFFYDPD 117

Query: 204 ANALEFTQ 211
              LE  +
Sbjct: 118 GLPLELYE 125

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 125

>gnl|CDD|221708 pfam12681, Glyoxalase_2, Glyoxalase-like domain

 Score = 50.1 bits (120), Expect = 2e-08
 Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 11/115 (9%)

Query: 99  ILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPE 158
           +   +LE +  FY+ +LG E+ E    +   +R   +      I L+ LP PD       
Sbjct: 1   LPVSDLEAARAFYEELLGFEVEE-EDGEYAEFRLGLVLALGGFIELIGLPEPDA------ 53

Query: 159 HGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANALEF 209
            GG   H    + D+  L   L  AG +        P      + RDPD N +E 
Sbjct: 54  PGGGGVHLYFEVDDLDALVARLKAAGGTILEPPEDTPWGGREFYVRDPDGNLIEL 108

This domain is related to the Glyoxalase domain pfam00903. Length = 109

>gnl|CDD|183156 PRK11478, PRK11478, putative lyase; Provisional

 Score = 49.9 bits (119), Expect = 4e-08
 Identities = 32/127 (25%), Positives = 51/127 (40%), Gaps = 6/127 (4%)

Query: 90  GVVSVHHVGILCENLERSLEFYQNILGLE-INEARPHDKLPYRGAWLWVGAEMIHLMELP 148
           G+  VHH+ I+  +   S  FY +ILG    +E     +  ++G     G  +I L   P
Sbjct: 3   GLKQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWKGDLALNGQYVIELFSFP 62

Query: 149 NPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDA 204
            P     RPE  G  RH   ++ D+      L+   +     +    + +   F  DPD 
Sbjct: 63  FPPERPSRPEACGL-RHLAFSVDDIDAAVAHLESHNVKCEAIRVDPYTQKRFTFFNDPDG 121

Query: 205 NALEFTQ 211
             LE  +
Sbjct: 122 LPLELYE 128

Length = 129

>gnl|CDD|211356 cd08346, PcpA_N_like, N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

 Score = 48.4 bits (116), Expect = 1e-07
 Identities = 30/127 (23%), Positives = 57/127 (44%), Gaps = 12/127 (9%)

Query: 94  VHHVGILCENLERSLEFYQNILGLE-----INEARPHDKLPYRGAWLWVGAEMIHLMELP 148
           +HHV ++  + + +++FY ++LGL      +N+  P     + G  L     ++   E P
Sbjct: 2   LHHVTLVTRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWP 61

Query: 149 NPDPLSGRPEHGGRDRHTCIAIRDVSKL---KMILDKAGISYT--LSKSGRPAIFTRDPD 203
           +  P  GR   G    H   ++   + L   +  L  AG+  +  + + G  +++  DPD
Sbjct: 62  DAGP-KGRRGPGQI-HHIAFSVPSEASLEAWRERLRAAGVPVSGVVDRFGERSLYFEDPD 119

Query: 204 ANALEFT 210
              LE T
Sbjct: 120 GIRLELT 126

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. Length = 126

>gnl|CDD|176676 cd07253, Glo_EDI_BRP_like_2, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 44.9 bits (107), Expect = 2e-06
 Identities = 29/128 (22%), Positives = 54/128 (42%), Gaps = 15/128 (11%)

Query: 91  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 150
           +  + HV +   ++E +L+FY  +LG+E+               L  G++ I+L  +   
Sbjct: 1   IKRIDHVVLTVADIEATLDFYTRVLGMEVVRFGEEVGRKA----LRFGSQKINLHPVGGE 56

Query: 151 -DPLSGRPEHGGRDRHTCIAI-RDVSKLKMILDKAGISYTLSKSGR-------PAIFTRD 201
            +P +G P   G D   C+     + +L   L+  G+        R        +++ RD
Sbjct: 57  FEPAAGSPGP-GSD-DLCLITEPPIDELVAHLEAHGVPIEEGPVPRTGARGPITSVYFRD 114

Query: 202 PDANALEF 209
           PD N +E 
Sbjct: 115 PDGNLIEL 122

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 125

>gnl|CDD|176659 cd07233, Glyoxalase_I, Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

 Score = 43.3 bits (103), Expect = 7e-06
 Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 10/115 (8%)

Query: 96  HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIH-LMELP-NPDPL 153
           H  +  ++LE+SL+FY ++LG+++   +   +  +   +L    E    ++EL  N    
Sbjct: 3   HTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWG-- 60

Query: 154 SGRPEHGGRD-RHTCIAIRDVSKLKMILDKAGISYT----LSKSGRPAIFTRDPD 203
           +  P   G    H   A+ DV      L++ G+  T           A F +DPD
Sbjct: 61  TEEPYDNGNGFGHLAFAVDDVYAACERLEEMGVEVTKPPGDGGMKGIA-FIKDPD 114

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic glyoxalase I uses nickel. However, eukaryotic Trypanosomatid parasites also use nickel as a cofactor, which could possibly be explained by acquiring their GLOI gene by horizontal gene transfer. Human glyoxalase I is a two-domain enzyme and it has the structure of a domain-swapped dimer with two active sites located at the dimer interface. In yeast, in various plants, insects and Plasmodia, glyoxalase I is four-domain, possibly the result of a further gene duplication and an additional gene fusing event. Length = 121

>gnl|CDD|222305 pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 42.7 bits (101), Expect = 1e-05
 Identities = 21/107 (19%), Positives = 38/107 (35%), Gaps = 1/107 (0%)

Query: 95  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS 154
           HH+GI+  +L+ +  F+ ++LGL        +      A+  +G      +EL  P    
Sbjct: 1   HHIGIVVPDLDAAAAFWVDLLGLGPWGDYRDEPQNVDLAFARLGDGPAVEVELIQPLDGE 60

Query: 155 GRPE-HGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTR 200
              +  G    H    + D+      L+  G+          A   R
Sbjct: 61  SFLDKGGPGLHHIAYWVDDLDAAVARLEAQGVRVAPKGPRAGAAGRR 107

Length = 110

>gnl|CDD|213772 TIGR03081, metmalonyl_epim, methylmalonyl-CoA epimerase

 Score = 42.3 bits (100), Expect = 2e-05
 Identities = 24/94 (25%), Positives = 48/94 (51%), Gaps = 2/94 (2%)

Query: 94  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPD-P 152
           + HVGI   +LE + +FY+++LG +++E     +   +  ++ +G   + L+E    D P
Sbjct: 2   IDHVGIAVPDLEEAAKFYEDVLGAQVSEIEELPEQGVKVVFIALGNTKVELLEPLGEDSP 61

Query: 153 LSGRPE-HGGRDRHTCIAIRDVSKLKMILDKAGI 185
           ++   E +GG   H  I + D+      L + G+
Sbjct: 62  IAKFLEKNGGGIHHIAIEVDDIEAALETLKEKGV 95

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer. Length = 128

>gnl|CDD|211352 cd07255, Glo_EDI_BRP_like_12, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 39.5 bits (93), Expect = 2e-04
 Identities = 34/121 (28%), Positives = 47/121 (38%), Gaps = 28/121 (23%)

Query: 103 NLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHG-- 160
           +LERSL FYQ++LGLE+ E           A L  G     L+ L   DP +     G  
Sbjct: 12  DLERSLAFYQDVLGLEVLERTDS------TAVLGTG-GKRPLLVL-EEDPDAPPAPPGTT 63

Query: 161 GRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-----------AIFTRDPDANALEF 209
           G   H  I +   + L   L        L + G P           A++  DP+ N +E 
Sbjct: 64  GLY-HFAILLPSRADLARAL------RRLIELGIPLEGASDHLVSEALYLSDPEGNGIEI 116

Query: 210 T 210
            
Sbjct: 117 Y 117

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 125

>gnl|CDD|211350 cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)

 Score = 37.9 bits (89), Expect = 8e-04
 Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 5/62 (8%)

Query: 94  VHHVGILCENLERSLEFYQNILGL---EINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 150
           + H+GI   +LE +L+FY+++LG+   E  E      +  R A+L +G   I L+E  + 
Sbjct: 1   IDHIGIAVPDLEAALKFYRDVLGVGPWEREEVPSEQGV--RLAFLGLGNVQIELIEPLDD 58

Query: 151 DP 152
           D 
Sbjct: 59  DS 60

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases. Length = 128

>gnl|CDD|176705 cd08357, Glo_EDI_BRP_like_18, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 36.5 bits (85), Expect = 0.002
 Identities = 33/134 (24%), Positives = 53/134 (39%), Gaps = 31/134 (23%)

Query: 95  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-----GAEMI-HLMELP 148
            H+ I   +LE +  FY ++LG    E R  +         WV     G +++ HL   P
Sbjct: 1   FHLAIPVRDLEAARAFYGDVLGC--KEGRSSET--------WVDFDFFGHQLVAHLS--P 48

Query: 149 NPDPLSGRPEHGGRD---RHTCIAIR--DVSKLKMILDKAGISYTLSKS----GRP---- 195
           N +  +      G      H  + +   +   L   L+ AG+ + +       G+P    
Sbjct: 49  NFNADASDNAVDGHPVPVPHFGLILSEEEFDALAERLEAAGVEFLIEPYTRFEGQPGEQE 108

Query: 196 AIFTRDPDANALEF 209
             F +DP  NALEF
Sbjct: 109 TFFLKDPSGNALEF 122

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 125

>gnl|CDD|176666 cd07242, Glo_EDI_BRP_like_6, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 36.5 bits (85), Expect = 0.002
 Identities = 12/25 (48%), Positives = 16/25 (64%)

Query: 93  SVHHVGILCENLERSLEFYQNILGL 117
            +HHV +   +LERS  FY  +LGL
Sbjct: 1   GIHHVELTVRDLERSRAFYDWLLGL 25

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 128

>gnl|CDD|176668 cd07244, FosA, FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

 Score = 36.2 bits (84), Expect = 0.003
 Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 16/119 (13%)

Query: 93  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 152
            ++H+ +   +LERS+ FY ++LG      + H +   +GA+L  G   + L    N  P
Sbjct: 1   GINHITLAVSDLERSVAFYVDLLGF-----KLHVRWD-KGAYLEAGDLWLCLSVDANVGP 54

Query: 153 LSGRPEHGGRDRHTCIAIR--DVSKLKMILDKAGI-SYTLSKSGRPAIFTRDPDANALE 208
                       H   ++   D + LK  L +AG+  +  + S   + +  DPD + LE
Sbjct: 55  AK-------DYTHYAFSVSEEDFASLKEKLRQAGVKEWKENTSEGDSFYFLDPDGHKLE 106

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases. Length = 121

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	214
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	99.86
PRK11478	129	putative lyase; Provisional	99.85
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	99.83
PLN03042	185	Lactoylglutathione lyase; Provisional	99.83
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	99.83
PLN02367	233	lactoylglutathione lyase	99.82
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	99.82
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	99.81
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	99.81
cd07243	143	2_3_CTD_C C-terminal domain of catechol 2,3-dioxyg	99.81
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	99.8
PRK04101	139	fosfomycin resistance protein FosB; Provisional	99.8
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	99.8
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	99.8
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	99.79
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	99.79
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	99.78
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	99.77
cd08361	124	PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cuma	99.77
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	99.77
PRK10291	129	glyoxalase I; Provisional	99.77
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	99.77
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	99.77
PLN02300	286	lactoylglutathione lyase	99.77
cd09014	166	BphC-JF8_C_like C-terminal, catalytic, domain of B	99.76
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	99.76
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	99.76
cd07265	122	2_3_CTD_N N-terminal domain of catechol 2,3-dioxyg	99.76
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	99.76
cd07267	113	THT_Oxygenase_N N-terminal domain of 2,4,5-trihydr	99.76
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	99.75
cd09013	121	BphC-JF8_N_like N-terminal, non-catalytic, domain	99.75
cd08355	122	Glo_EDI_BRP_like_14 This conserved domain belongs	99.75
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	99.75
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	99.75
cd07256	161	HPCD_C_class_II C-terminal domain of 3,4-dihydroxy	99.74
cd07244	121	FosA FosA, a Fosfomycin resistance protein, cataly	99.74
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	99.74
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	99.74
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	99.74
cd08362	120	BphC5-RrK37_N_like N-terminal, non-catalytic, doma	99.74
cd08351	123	ChaP_like ChaP, an enzyme involved in the biosynth	99.73
cd07246	122	Glo_EDI_BRP_like_8 This conserved domain belongs t	99.73
cd09011	120	Glo_EDI_BRP_like_23 This conserved domain belongs	99.72
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	99.72
cd07264	125	Glo_EDI_BRP_like_15 This conserved domain belongs	99.72
cd08345	113	Fosfomycin_RP Fosfomycin resistant protein; inhibi	99.72
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.71
cd08359	119	Glo_EDI_BRP_like_22 This conserved domain belongs	99.71
cd08343	131	ED_TypeI_classII_C C-terminal domain of type I, cl	99.71
cd07239	144	BphC5-RK37_C_like C-terminal, catalytic, domain of	99.7
PRK06724	128	hypothetical protein; Provisional	99.7
cd08354	122	Glo_EDI_BRP_like_13 This conserved domain belongs	99.7
cd08349	112	BLMA_like Bleomycin binding protein (BLMA) and sim	99.69
cd07266	121	HPCD_N_class_II N-terminal domain of 3,4-dihydroxy	99.69
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	99.68
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.68
cd08357	125	Glo_EDI_BRP_like_18 This conserved domain belongs	99.68
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	99.68
cd07258	141	PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cuma	99.68
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	99.68
cd07254	120	Glo_EDI_BRP_like_20 This conserved domain belongs	99.67
cd08350	120	BLMT_like BLMT, a bleomycin resistance protein enc	99.67
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.67
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	99.66
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	99.65
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	99.65
cd08356	113	Glo_EDI_BRP_like_17 This conserved domain belongs	99.65
cd07261	114	Glo_EDI_BRP_like_11 This conserved domain belongs	99.64
cd07238	112	Glo_EDI_BRP_like_5 This conserved domain belongs t	99.64
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	99.63
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	99.62
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.6
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.59
cd07251	121	Glo_EDI_BRP_like_10 This conserved domain belongs	99.59
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.59
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	99.57
PLN02300	286	lactoylglutathione lyase	99.55
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	99.45
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	99.38
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	99.34
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	99.27
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	99.26
COG3607	133	Predicted lactoylglutathione lyase [General functi	99.25
COG3324	127	Predicted enzyme related to lactoylglutathione lya	99.22
cd06588	128	PhnB_like Escherichia coli PhnB and similar protei	99.2
COG0346	138	GloA Lactoylglutathione lyase and related lyases [	99.18
COG3565	138	Predicted dioxygenase of extradiol dioxygenase fam	99.09
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	99.04
COG2764	136	PhnB Uncharacterized protein conserved in bacteria	99.02
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	98.95
PF14696	139	Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, H	98.86
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	98.79
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	98.78
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	98.76
PRK01037	357	trmD tRNA (guanine-N(1)-)-methyltransferase/unknow	98.72
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	98.58
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	98.42
PRK10148	147	hypothetical protein; Provisional	98.19
PF14506	125	CppA_N: CppA N-terminal; PDB: 3E0R_D.	98.18
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	98.11
COG2185	143	Sbm Methylmalonyl-CoA mutase, C-terminal domain/su	98.02
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	97.74
PF06983	116	3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltrans	97.13
PF15067	236	FAM124: FAM124 family	96.19
TIGR01501	134	MthylAspMutase methylaspartate mutase, S subunit.	95.98
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	95.81
TIGR00640	132	acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal	95.49
PF14507	101	CppA_C: CppA C-terminal; PDB: 3E0R_D.	94.34
cd02072	128	Glm_B12_BD B12 binding domain of glutamate mutase	94.32
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	92.93
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	92.44
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	92.24
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	92.22
PLN02367	233	lactoylglutathione lyase	91.35
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	91.29
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	90.91
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	90.88
PRK02261	137	methylaspartate mutase subunit S; Provisional	90.53
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	90.36
PF13670	83	PepSY_2: Peptidase propeptide and YPEB domain This	90.14
PRK11478	129	putative lyase; Provisional	88.99
PRK10291	129	glyoxalase I; Provisional	88.52
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	88.43
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	88.16
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	87.6
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	87.36
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	87.31
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	87.09
PLN03042	185	Lactoylglutathione lyase; Provisional	86.94
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	86.42
COG3865	151	Uncharacterized protein conserved in bacteria [Fun	85.93
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	85.49
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	85.1
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	84.18
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	83.82
PF06185	185	YecM: YecM protein; InterPro: IPR010393 This famil	83.52
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	82.22
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	81.76
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	81.11
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	80.77
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	80.36

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.86  E-value=2.8e-20  Score=141.84  Aligned_cols=121  Identities=21%  Similarity=0.343  Sum_probs=91.7

Q ss_pred             eeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCC-----------CCceEEEEEE--CCeEEEEEecCCCCCCCC--
Q 028083           91 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK-----------LPYRGAWLWV--GAEMIHLMELPNPDPLSG--  155 (214)
Q Consensus        91 i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~-----------~~~~~~~l~~--g~~~l~l~~~~~~~~~~~--  155 (214)
                      +.+++||+|.|.|++++++||++ |||++.......+           .....+++..  |+..++++.+..+.....  
T Consensus         1 ~~~i~Hi~i~v~Dl~~s~~FY~~-LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~iel~~~~~~~~~~~~~   79 (142)
T cd08353           1 VSRMDNVGIVVRDLEAAIAFFLE-LGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRTPDGHSRLELSKFHHPAVIADHR   79 (142)
T ss_pred             CceeeeEEEEeCCHHHHHHHHHH-cCCEEccccccChHHHHHhcCCCCceEEEEEEeCCCCCceEEEEEecCCCCcCcCC
Confidence            46899999999999999999998 9998865432111           1223344543  556889988655433221  


Q ss_pred             -CCCCCCcceEEEEEECCHHHHHHHHHhCCCeEEeec----CCceEEEEEcCCCCeEEEEee
Q 028083          156 -RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       156 -~~~~g~g~~hiaf~V~dv~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~~~  212 (214)
                       ...++.|++|+||+|+|+++++++|+++|+++..++    .+.+.+||+||||+.|||+|.
T Consensus        80 ~~~~~~~g~~hia~~v~d~d~~~~~l~~~G~~~~~~~~~~~~~~r~~~~~DPdG~~iEl~e~  141 (142)
T cd08353          80 PAPVNALGLRRVMFAVDDIDARVARLRKHGAELVGEVVQYENSYRLCYIRGPEGILIELAEQ  141 (142)
T ss_pred             CCCCCCCCceEEEEEeCCHHHHHHHHHHCCCceeCCceecCCCeEEEEEECCCCCEEEeeec
Confidence             133466889999999999999999999999986432    457889999999999999984

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>PRK11478 putative lyase; Provisional

Probab=99.85  E-value=8.6e-20  Score=136.55  Aligned_cols=121  Identities=23%  Similarity=0.361  Sum_probs=87.8

Q ss_pred             eeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEE-CCeEEEEEecCCCCCCCCCCCCCCcceEEEE
Q 028083           90 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  168 (214)
Q Consensus        90 ~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~-g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf  168 (214)
                      .+.+++||+|.|+|++++++||+++|||++...............+.. ++..++++....+...... ....++.|++|
T Consensus         3 ~i~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~-~~~~g~~hi~f   81 (129)
T PRK11478          3 GLKQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWKGDLALNGQYVIELFSFPFPPERPSR-PEACGLRHLAF   81 (129)
T ss_pred             CcceecEEEEEcCCHHHHHHHHHHHhCCEecccccccccccceeeEecCCCcEEEEEEecCCCCCCCC-CCCCceeEEEE
Confidence            457899999999999999999999999998743221111111112333 4556777765433221111 13356789999


Q ss_pred             EECCHHHHHHHHHhCCCeEEee----cCCceEEEEEcCCCCeEEEEe
Q 028083          169 AIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  211 (214)
Q Consensus       169 ~V~dv~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~iEl~~  211 (214)
                      .|+|+++++++|++.|+++.+.    ..|.+.+||+|||||.|||+|
T Consensus        82 ~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iEl~~  128 (129)
T PRK11478         82 SVDDIDAAVAHLESHNVKCEAIRVDPYTQKRFTFFNDPDGLPLELYE  128 (129)
T ss_pred             EeCCHHHHHHHHHHcCCeeeccccCCCCCCEEEEEECCCCCEEEEEe
Confidence            9999999999999999998643    246788999999999999997

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.83  E-value=3e-19  Score=131.80  Aligned_cols=119  Identities=27%  Similarity=0.436  Sum_probs=88.0

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEE-CCeEEEEEecCCCCCCCCCCCCCCcceEEEEEE
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  170 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~-g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V  170 (214)
                      .+++||+|.|.|++++++||+++|||++.............+.+.. ++..++++...........+ .+.+++|++|+|
T Consensus         2 ~~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~-~~~g~~h~~~~v   80 (125)
T cd08352           2 FGIHHVAIICSDYEKSKEFYVEILGFKVIREVYRPERGSYKLDLLLNGGYQLELFSFPNPPERPSYP-EACGLRHLAFSV   80 (125)
T ss_pred             CccceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCCCCcEEEEEecCCCcEEEEEEcCCCCCCCCCC-cCCCceEEEEEe
Confidence            5799999999999999999999999998865332222222233433 55677776554332211111 345789999999


Q ss_pred             CCHHHHHHHHHhCCCeEEee----cCCceEEEEEcCCCCeEEEEe
Q 028083          171 RDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  211 (214)
Q Consensus       171 ~dv~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~iEl~~  211 (214)
                      +|+++++++++++|+++.+.    ..+.+.+|++||+||+|||+|
T Consensus        81 ~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DP~G~~iEl~~  125 (125)
T cd08352          81 EDIEAAVKHLKAKGVEVEPIRVDEFTGKRFTFFYDPDGLPLELYE  125 (125)
T ss_pred             CCHHHHHHHHHHcCCccccccccCCCceEEEEEECCCCCEEEecC
Confidence            99999999999999997643    235678999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=99.83  E-value=4.2e-19  Score=142.16  Aligned_cols=122  Identities=17%  Similarity=0.221  Sum_probs=91.7

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEE-------------------CCeEEEEEecCCCCC
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-------------------GAEMIHLMELPNPDP  152 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~-------------------g~~~l~l~~~~~~~~  152 (214)
                      .++.|++|.|.|+++|++||+++|||++..+...+......+|+..                   ++..++|+......+
T Consensus        26 ~~~~Ht~i~V~Dle~Si~FY~~vLG~~~~~r~~~~~~~~~~~fl~~~~~~~~~~~~~~~~~~l~~~~~~lEL~~~~~~~~  105 (185)
T PLN03042         26 YIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPTDPPERTVWTFGRKATIELTHNWGTES  105 (185)
T ss_pred             cEEEEEEEeeCCHHHHHHHHHhhcCCEEEEEEEcCCCceEEEEEecCCcccCCcchhhcccccccCCCEEEEEEcCCCcc
Confidence            5899999999999999999999999999866443344444555532                   345788887654332


Q ss_pred             -C-CC-C---CCCCCcceEEEEEECCHHHHHHHHHhCCCeEEeecC---CceEEEEEcCCCCeEEEEeec
Q 028083          153 -L-SG-R---PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS---GRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       153 -~-~~-~---~~~g~g~~hiaf~V~dv~~~~~~l~~~G~~~~~~~~---g~~~~~~~DPdG~~iEl~~~~  213 (214)
                       + .. .   +..+.|++|+||.|+|+++++++|+++|+++...+.   +...+|++|||||+|||++..
T Consensus       106 ~p~~~~~~~~~~~~~G~~Hlaf~V~Dvd~~~~~L~~~Gv~v~~~p~~~~~~~~~fi~DPdG~~IEl~e~~  175 (185)
T PLN03042        106 DPEFKGYHNGNSDPRGFGHIGITVDDVYKACERFEKLGVEFVKKPDDGKMKGLAFIKDPDGYWIEIFDLK  175 (185)
T ss_pred             cccccccccCCCCCCCccEEEEEcCCHHHHHHHHHHCCCeEEeCCccCCceeEEEEECCCCCEEEEEECC
Confidence             1 11 1   112358899999999999999999999999875432   345678899999999999864

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=99.83  E-value=3.3e-19  Score=139.95  Aligned_cols=122  Identities=22%  Similarity=0.269  Sum_probs=91.6

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeee----cCC--------------CCCCceEEEEEEC-CeEEEEEecCCCCC
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEA----RPH--------------DKLPYRGAWLWVG-AEMIHLMELPNPDP  152 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~----~~~--------------~~~~~~~~~l~~g-~~~l~l~~~~~~~~  152 (214)
                      .+++||+|.|.|+++|++||+++|||++..+    .+.              .......+++..+ +..+++++..++..
T Consensus         3 ~~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ieL~~~~~~~~   82 (162)
T TIGR03645         3 RTFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGDRIGVELFEFKNQEN   82 (162)
T ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCCCCcEEEEeccCCCC
Confidence            5899999999999999999999999988531    110              0112445666654 46799998876554


Q ss_pred             CCCC-CCCCCcceEEEEEECCHHHHHHHHHhCCCeEEeec-----C---CceEEEEEcCCCCeEEEEeec
Q 028083          153 LSGR-PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK-----S---GRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       153 ~~~~-~~~g~g~~hiaf~V~dv~~~~~~l~~~G~~~~~~~-----~---g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      +... ...+.|.+|+||.|+|+++++++++++|+++....     .   +.+.+|++|||||.|||++.+
T Consensus        83 ~~~~~~~~~~g~~Hla~~v~dida~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~  152 (162)
T TIGR03645        83 PEDNFEYWKTGVFHFCVQDPDVEGLAERIVAAGGKKRMPVPRYYYPGEKPYRMIYMEDPFGNILEIYSHS  152 (162)
T ss_pred             CCcccccccccceEEEEEcCCHHHHHHHHHHcCCcccCCCccccCCCCCceEEEEEECCCCCEEEEEEcC
Confidence            4332 12357889999999999999999999998753211     1   247899999999999999864

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>PLN02367 lactoylglutathione lyase

Probab=99.82  E-value=4.8e-19  Score=145.37  Aligned_cols=122  Identities=17%  Similarity=0.253  Sum_probs=93.9

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEE------------------C-CeEEEEEecCCCCC
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV------------------G-AEMIHLMELPNPDP  152 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~------------------g-~~~l~l~~~~~~~~  152 (214)
                      -.+.|++|.|.|++++++||+++|||++..+...+...+..+|+..                  + +..++|+...+.+.
T Consensus        74 ~~~~HtmlRVkDle~Sl~FYt~vLGm~ll~r~d~pe~~f~lyFL~~~~~~~~p~d~~~r~~~~~~~~~~LELt~n~g~e~  153 (233)
T PLN02367         74 YIMQQTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTFGQKATIELTHNWGTES  153 (233)
T ss_pred             cEEEEEEEEeCCHHHHHHHHHHhcCCEEeEEEecCCCcEEEEEeecCCccccccccccceeeccCCCCEEEEecCCCCCc
Confidence            4799999999999999999999999999876554455566667642                  1 34788887665442


Q ss_pred             --CCC-C-CCC--CCcceEEEEEECCHHHHHHHHHhCCCeEEeecC-C--ceEEEEEcCCCCeEEEEeec
Q 028083          153 --LSG-R-PEH--GGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS-G--RPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       153 --~~~-~-~~~--g~g~~hiaf~V~dv~~~~~~l~~~G~~~~~~~~-g--~~~~~~~DPdG~~iEl~~~~  213 (214)
                        ... . ...  ..|.+||||.|+|+++++++|+++|+++...+. +  ...+|++|||||+|||+|..
T Consensus       154 ~~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~erL~a~Gv~~v~~P~~g~~~riaFIkDPDGn~IEL~e~~  223 (233)
T PLN02367        154 DPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFEELGVEFVKKPNDGKMKGIAFIKDPDGYWIEIFDLK  223 (233)
T ss_pred             cccchhcccCCCCCCCceEEEEEcCCHHHHHHHHHHCCCEEEeCCccCCceEEEEEECCCCCEEEEEecc
Confidence              211 1 112  258999999999999999999999999875432 2  45789999999999999864

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=99.82  E-value=3.6e-19  Score=135.43  Aligned_cols=118  Identities=12%  Similarity=0.045  Sum_probs=89.9

Q ss_pred             EeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCC--CCCCCcceEEEEEEC
Q 028083           94 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGR--PEHGGRDRHTCIAIR  171 (214)
Q Consensus        94 i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~--~~~g~g~~hiaf~V~  171 (214)
                      ++|++|.|.|++++++||+++|||++.......  .....++..|+..+.+.......+....  ..++.+..|++|.|+
T Consensus         1 ~~Hi~i~V~D~e~s~~FY~~vLGf~~~~~~~~~--~~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~~~g~~hia~~V~   78 (136)
T cd08342           1 FDHVEFYVGNAKQLASWFSTKLGFEPVAYHGSE--DKASYLLRQGDINFVLNSPLNSFAPVADFLEKHGDGVCDVAFRVD   78 (136)
T ss_pred             CeEEEEEeCCHHHHHHHHHHhcCCeEEEecCCC--ceEEEEEEcCCEEEEEecCCCCCCchHHHHHhcCCceEEEEEEeC
Confidence            589999999999999999999999998654322  1234456667777777654433222111  235678899999999


Q ss_pred             CHHHHHHHHHhCCCeEEee----cCCceEEEEEcCCCCeEEEEeec
Q 028083          172 DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       172 dv~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      |+++++++|+++|+++..+    ..+.+.++++||||+.|||+|..
T Consensus        79 Dvda~~~~l~~~G~~v~~~p~~~~~~~~~~~i~dp~G~~ie~~~~~  124 (136)
T cd08342          79 DAAAAYERAVARGAKPVQEPVEEPGELKIAAIKGYGDSLHTLVDRK  124 (136)
T ss_pred             CHHHHHHHHHHcCCeEccCceecCCeEEEEEEeccCCcEEEEEecC
Confidence            9999999999999998633    24568999999999999999854

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.81  E-value=1.1e-18  Score=129.14  Aligned_cols=117  Identities=23%  Similarity=0.318  Sum_probs=84.5

Q ss_pred             eEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEE-CCeEEEEEecCCCCCCCCCCCCCCcceEEEEEEC
Q 028083           93 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR  171 (214)
Q Consensus        93 ~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~-g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V~  171 (214)
                      +++||+|.|.|++++++||+++|||++..............|+.. ++..++++......... ......|..|+||.|+
T Consensus         1 ~~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~g~~hi~f~v~   79 (125)
T cd07241           1 KIEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKGFESYFLSFDDGARLELMTRPDIAPSP-NEGERTGWAHLAFSVG   79 (125)
T ss_pred             CceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCCceEEEEecCCCcEEEEEcCcccCCCc-ccCCCCceEEEEEECC
Confidence            478999999999999999999999998643221222334556666 45677887643322111 1123356899999996


Q ss_pred             ---CHHHHHHHHHhCCCeEEeec----CCceEEEEEcCCCCeEEEE
Q 028083          172 ---DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFT  210 (214)
Q Consensus       172 ---dv~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~  210 (214)
                         |+++++++|+++|+++...+    .|.+.++++|||||.|||.
T Consensus        80 ~~~~v~~~~~~l~~~g~~~~~~~~~~~~g~~~~~~~DPdG~~iE~~  125 (125)
T cd07241          80 SKEAVDELTERLRADGYLIIGEPRTTGDGYYESVILDPEGNRIEIT  125 (125)
T ss_pred             CHHHHHHHHHHHHHCCCEEEeCceecCCCeEEEEEECCCCCEEEeC
Confidence               58999999999999987532    3455678999999999983

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=99.81  E-value=1.2e-18  Score=131.76  Aligned_cols=115  Identities=17%  Similarity=0.269  Sum_probs=86.1

Q ss_pred             eeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCC-CceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEE
Q 028083           90 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKL-PYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  168 (214)
Q Consensus        90 ~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~-~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf  168 (214)
                      |+.+++||.|.|+|++++++||+++|||++......... .....|+..|+..+.+.....+        ...+++|+||
T Consensus         1 mi~~i~hv~l~V~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~--------~~~~~~Hiaf   72 (131)
T cd08364           1 MIEGLSHITLIVKDLNKTTAFLQNIFNAREVYSSGDKTFSLSKEKFFLIGGLWIAIMEGDSL--------QERTYNHIAF   72 (131)
T ss_pred             CcccEeEEEEEeCCHHHHHHHHHHHhCCeeEEecccccccccceeEEEcCCeEEEEecCCCC--------CCCCceEEEE
Confidence            568999999999999999999999999988755322111 1112344456666666532221        1235799999


Q ss_pred             EEC--CHHHHHHHHHhCCCeEEeec---C-CceEEEEEcCCCCeEEEEee
Q 028083          169 AIR--DVSKLKMILDKAGISYTLSK---S-GRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       169 ~V~--dv~~~~~~l~~~G~~~~~~~---~-g~~~~~~~DPdG~~iEl~~~  212 (214)
                      .|+  |+++++++|+++|+++.++.   . +++.+||+|||||.|||.+.
T Consensus        73 ~v~~~~ld~~~~~l~~~gv~~~~~~~~~~~~g~~~yf~DPdG~~iEl~~~  122 (131)
T cd08364          73 KISDSDVDEYTERIKALGVEMKPPRPRVQGEGRSIYFYDFDNHLFELHTG  122 (131)
T ss_pred             EcCHHHHHHHHHHHHHCCCEEecCCccccCCceEEEEECCCCCEEEEecC
Confidence            998  79999999999999986442   2 37899999999999999864

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07243 2_3_CTD_C C-terminal domain of catechol 2,3-dioxygenase

Probab=99.81  E-value=1.6e-18  Score=133.38  Aligned_cols=113  Identities=17%  Similarity=0.242  Sum_probs=82.2

Q ss_pred             eeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCC-CCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEE
Q 028083           90 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPH-DKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  168 (214)
Q Consensus        90 ~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~-~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf  168 (214)
                      .+.+++||+|.|+|++++.+||+++|||++...... .+......|+..++. .+.+.....        .+++++|+||
T Consensus         3 ~~~~l~Hv~l~v~Dle~s~~FY~~vLGf~~~~~~~~~~~~~~~~~~l~~~~~-~h~~~~~~~--------~~~~~~Hiaf   73 (143)
T cd07243           3 GAHRLDHCLLTGEDIAETTRFFTDVLDFYLAERVVDPDGGTRVGSFLSCSNK-PHDIAFVGG--------PDGKLHHFSF   73 (143)
T ss_pred             CCceeCEEEEecCCHHHHHHHHHHhcCCEEEEEEecCCCCeEEEEEEecCCC-cceEEEecC--------CCCCceEEEE
Confidence            357899999999999999999999999998754322 121223567765543 222222111        1246899999


Q ss_pred             EECCHHH---HHHHHHhCCCeEEeec--C---CceEEEEEcCCCCeEEEEe
Q 028083          169 AIRDVSK---LKMILDKAGISYTLSK--S---GRPAIFTRDPDANALEFTQ  211 (214)
Q Consensus       169 ~V~dv~~---~~~~l~~~G~~~~~~~--~---g~~~~~~~DPdG~~iEl~~  211 (214)
                      .|+|+++   ++++|+++|+++..++  +   ++.++||.|||||+|||++
T Consensus        74 ~v~d~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~yf~DPdG~~iEl~~  124 (143)
T cd07243          74 FLESWEDVLKAGDIISMNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFA  124 (143)
T ss_pred             EcCCHHHHHHHHHHHHHcCCceEECCcCCCCCCceEEEEECCCCCEEEEec
Confidence            9998777   6789999999986432  2   3678999999999999965

This subfamily contains the C-terminal, catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the C-terminal domain.

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=99.80  E-value=5.2e-19  Score=131.71  Aligned_cols=119  Identities=20%  Similarity=0.423  Sum_probs=88.8

Q ss_pred             eEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCC--CCCCCcceEEEEEE
Q 028083           93 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGR--PEHGGRDRHTCIAI  170 (214)
Q Consensus        93 ~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~--~~~g~g~~hiaf~V  170 (214)
                      +++|++|.|.|++++++||+++|||++.............+++..++..+++............  ..++.+++|+||+|
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~g~~~i~~~v   80 (128)
T TIGR03081         1 RIDHVGIAVPDLEEAAKLYEDVLGAHVSHIEEVPEQGVKVVFIALGNTKVELLEPLGEDSPIAKFLEKNGGGIHHIAIEV   80 (128)
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHhCCCCccceeCCCCCcEEEEEecCCEEEEEEecCCCCChHHHHHhcCCCceEEEEEEc
Confidence            5799999999999999999999999987543222223456677778788888765333222111  22356788999999


Q ss_pred             CCHHHHHHHHHhCCCeEEee--c---CCceEEEE--EcCCCCeEEEEe
Q 028083          171 RDVSKLKMILDKAGISYTLS--K---SGRPAIFT--RDPDANALEFTQ  211 (214)
Q Consensus       171 ~dv~~~~~~l~~~G~~~~~~--~---~g~~~~~~--~DPdG~~iEl~~  211 (214)
                      +|+++++++++++|+++..+  .   .|.+.+|+  +||||+.||+.|
T Consensus        81 ~di~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~~~~dp~G~~~E~~~  128 (128)
T TIGR03081        81 DDIEAALETLKEKGVRLIDEEPRIGAGGKPVAFLHPKSTGGVLIELEE  128 (128)
T ss_pred             CCHHHHHHHHHHCCCcccCCCCccCCCCCEEEEecccccCcEEEEecC
Confidence            99999999999999998642  2   23456666  799999999975

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>PRK04101 fosfomycin resistance protein FosB; Provisional

Probab=99.80  E-value=1.8e-18  Score=132.01  Aligned_cols=113  Identities=23%  Similarity=0.356  Sum_probs=88.1

Q ss_pred             eeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEEE
Q 028083           90 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  169 (214)
Q Consensus        90 ~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~  169 (214)
                      |+.+++||.|.|+|++++++||+++|||++....+      ..+|+..++..+.+......  +  ....+.+.+|++|.
T Consensus         1 ~i~~i~hi~L~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~g~~l~l~~~~~~--~--~~~~~~~~~hiaf~   70 (139)
T PRK04101          1 MLKGINHICFSVSNLEKSIEFYEKVLGAKLLVKGR------KTAYFDLNGLWIALNEEKDI--P--RNEIHQSYTHIAFS   70 (139)
T ss_pred             CCCcEEEEEEEecCHHHHHHHHHhccCCEEEeecC------eeEEEecCCeEEEeeccCCC--C--CccCCCCeeEEEEE
Confidence            57899999999999999999999999999985422      24667777766665432211  1  11124567899999


Q ss_pred             EC--CHHHHHHHHHhCCCeEEeec----CCceEEEEEcCCCCeEEEEee
Q 028083          170 IR--DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       170 V~--dv~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      ++  |+++++++++++|+++...+    .+++.+||+|||||+|||++-
T Consensus        71 v~~~dv~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~DPdGn~iEl~~~  119 (139)
T PRK04101         71 IEEEDFDHWYQRLKENDVNILPGRERDERDKKSIYFTDPDGHKFEFHTG  119 (139)
T ss_pred             ecHHHHHHHHHHHHHCCceEcCCccccCCCceEEEEECCCCCEEEEEeC
Confidence            98  99999999999999985332    357999999999999999863

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=99.80  E-value=2.5e-18  Score=126.81  Aligned_cols=114  Identities=21%  Similarity=0.315  Sum_probs=85.9

Q ss_pred             EeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECC----eEEEEEecCCCCCCCCCCCCCCcceEEEEE
Q 028083           94 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRDRHTCIA  169 (214)
Q Consensus        94 i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~----~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~  169 (214)
                      ++||+|.|+|++++.+||+++|||++....+..+.....+|+..++    ..+++........   ....+.+..|++|.
T Consensus         1 ~~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~i~~~   77 (121)
T cd07233           1 FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWGTEE---PYDNGNGFGHLAFA   77 (121)
T ss_pred             CeeEEEEecCcHHHHHHHHhccCCeEEEEEecCCCceEEEEecCCCCCCccEEEEEecCCCCC---CcCCCCCeEEEEEE
Confidence            5899999999999999999999999886544333334456676543    4566654332211   11234467899999


Q ss_pred             ECCHHHHHHHHHhCCCeEEeec---CCceEEEEEcCCCCeEEEE
Q 028083          170 IRDVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFT  210 (214)
Q Consensus       170 V~dv~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdG~~iEl~  210 (214)
                      |+|+++++++++++|+++..++   .+++.+||+|||||+|||+
T Consensus        78 v~did~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DpdG~~iE~~  121 (121)
T cd07233          78 VDDVYAACERLEEMGVEVTKPPGDGGMKGIAFIKDPDGYWIELI  121 (121)
T ss_pred             eCCHHHHHHHHHHCCCEEeeCCccCCCceEEEEECCCCCEEEeC
Confidence            9999999999999999987553   3467899999999999985

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.80  E-value=3.3e-18  Score=126.19  Aligned_cols=117  Identities=21%  Similarity=0.373  Sum_probs=88.2

Q ss_pred             eeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEEEE
Q 028083           91 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  170 (214)
Q Consensus        91 i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V  170 (214)
                      |++++|+.|.|.|++++++||+++|||++....+..    ...++..++..+.+........+ .....+.+..|++|.+
T Consensus         1 ~~~l~hi~l~v~d~~~s~~Fy~~~lG~~~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~hi~~~~   75 (125)
T cd07253           1 IKRIDHVVLTVADIEATLDFYTRVLGMEVVRFGEEV----GRKALRFGSQKINLHPVGGEFEP-AAGSPGPGSDDLCLIT   75 (125)
T ss_pred             CcccceEEEEecCHHHHHHHHHHHhCceeecccccC----CceEEEeCCEEEEEecCCCccCc-CccCCCCCCceEEEEe
Confidence            468999999999999999999999999998653211    23456677777777654332211 1122456789999999


Q ss_pred             CC-HHHHHHHHHhCCCeEEeec-------CCceEEEEEcCCCCeEEEEee
Q 028083          171 RD-VSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       171 ~d-v~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      ++ +++++++++++|+++...+       .+++.+||+|||||+||++++
T Consensus        76 ~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~~  125 (125)
T cd07253          76 EPPIDELVAHLEAHGVPIEEGPVPRTGARGPITSVYFRDPDGNLIELSNY  125 (125)
T ss_pred             cccHHHHHHHHHHCCceeecCcccccCCCCCccEEEEECCCCCEEEeeeC
Confidence            84 9999999999999875322       125789999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=99.79  E-value=3.6e-18  Score=131.96  Aligned_cols=121  Identities=22%  Similarity=0.317  Sum_probs=86.2

Q ss_pred             ceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECC--e--EEEEEecCCCCCCCCCCCCCCcce
Q 028083           89 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--E--MIHLMELPNPDPLSGRPEHGGRDR  164 (214)
Q Consensus        89 ~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~--~--~l~l~~~~~~~~~~~~~~~g~g~~  164 (214)
                      ...++++||.|.|.|++++.+||+++|||++......+......+|+..++  .  .+.+.......    ....+.+..
T Consensus        13 ~~~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~----~~~~~~g~~   88 (150)
T TIGR00068        13 TKKRRLLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSAAVIELTHNWGTE----KYDLGNGFG   88 (150)
T ss_pred             cCCceEEEEEEEecCHHHHHHHHHHhcCCEEEEEeccCCCceEEEEecCCCCCCccEEEEeecCCCC----cccCCCcee
Confidence            345899999999999999999999999999876543223333445555432  1  23332211111    112345788


Q ss_pred             EEEEEECCHHHHHHHHHhCCCeEEeec----C-CceEEEEEcCCCCeEEEEeec
Q 028083          165 HTCIAIRDVSKLKMILDKAGISYTLSK----S-GRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       165 hiaf~V~dv~~~~~~l~~~G~~~~~~~----~-g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      |++|.|+|+++++++|.++|+++...+    . +.+.+||+|||||+|||++..
T Consensus        89 hi~f~v~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  142 (150)
T TIGR00068        89 HIAIGVDDVYKACERVRALGGNVVREPGPVKGGTTVIAFVEDPDGYKIELIQRK  142 (150)
T ss_pred             EEEEecCCHHHHHHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEECC
Confidence            999999999999999999999875432    2 246789999999999999864

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.79  E-value=2.3e-18  Score=124.41  Aligned_cols=110  Identities=40%  Similarity=0.745  Sum_probs=85.6

Q ss_pred             EeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCe-EEEEEecCCCCCCCCCCCCCCcceEEEEEECC
Q 028083           94 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE-MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD  172 (214)
Q Consensus        94 i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~-~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V~d  172 (214)
                      ++|++|.|+|++++.+||+++|||++.......   ...+|+..++. .+++.........   +..+++..|++|+|+|
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~~---~~~~~~~~~~~~~i~l~~~~~~~~~---~~~~~~~~~~~~~v~d   74 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPFL---FPGAWLYAGDGPQLHLIEEDPPDAL---PEGPGRDDHIAFRVDD   74 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCCC---CCceEEEeCCCcEEEEEecCCCccc---cCCCcccceEEEEeCC
Confidence            589999999999999999999999987543221   23367777654 6777765443321   2234567899999999


Q ss_pred             HHHHHHHHHhCCCeEEeec---CCceEEEEEcCCCCeEEE
Q 028083          173 VSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEF  209 (214)
Q Consensus       173 v~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdG~~iEl  209 (214)
                      +++++++++++|+++....   .+.+.+++.|||||+|||
T Consensus        75 ~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~DP~G~~iE~  114 (114)
T cd07245          75 LDAFRARLKAAGVPYTESDVPGDGVRQLFVRDPDGNRIEL  114 (114)
T ss_pred             HHHHHHHHHHcCCCcccccCCCCCccEEEEECCCCCEEeC
Confidence            9999999999999986543   457889999999999996

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.78  E-value=1.1e-17  Score=124.95  Aligned_cols=114  Identities=25%  Similarity=0.346  Sum_probs=88.1

Q ss_pred             eEeEEEEEcCCHHHHHHHHHHhc---CCEEeeecCCCCCCceEEEEEE-CCeEEEEEecCCCCCCCCCCCCCCcceEEEE
Q 028083           93 SVHHVGILCENLERSLEFYQNIL---GLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  168 (214)
Q Consensus        93 ~i~HV~l~V~D~~~a~~FY~~~L---Gf~~~~~~~~~~~~~~~~~l~~-g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf  168 (214)
                      +++||+|.|.|++++++||+++|   ||++....+  .   ...|... ++..+.+.......+. .....+.+++|+||
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~~--~---~~~~~~~~~~~~i~l~~~~~~~~~-~~~~~~~g~~hia~   74 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWE--D---GRSWRAGDGGTYLVLQQADGESAG-RHDRRNPGLHHLAF   74 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhhcCCEEEEeec--c---CceEEecCCceEEEEEecccCCCc-ccccCCcCeeEEEE
Confidence            58999999999999999999999   999986542  1   2245443 6677888766554332 12234567899999


Q ss_pred             EEC---CHHHHHHHHHhCCCeEEeec-------CCceEEEEEcCCCCeEEEEee
Q 028083          169 AIR---DVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       169 ~V~---dv~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      .|+   |+++++++++++|+++....       .+.+.+|++|||||+|||+.+
T Consensus        75 ~v~~~~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DpdG~~ie~~~~  128 (128)
T cd07242          75 RAPSREAVDELYARLAKRGAEILYAPREPYAGGPGYYALFFEDPDGIRLELVAP  128 (128)
T ss_pred             EcCCHHHHHHHHHHHHHcCCeEecCCcccccCCCcEEEEEEECCCCcEEEEEeC
Confidence            997   58999999999999986432       246899999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.77  E-value=1.2e-17  Score=130.56  Aligned_cols=113  Identities=17%  Similarity=0.235  Sum_probs=85.0

Q ss_pred             eEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEEC---CeEEEEEecCCCCCCCCCCCCCCcceEEEEE
Q 028083           93 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG---AEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  169 (214)
Q Consensus        93 ~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g---~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~  169 (214)
                      |++||+|.|+|++++.+||+++|||++....+     ....|+..+   +..+.++.......   .....++++|+||.
T Consensus         1 gl~HI~i~V~Dle~s~~FY~~~LG~~~~~~~~-----~~~~~~~~~~~~~~~l~l~~~~~~~~---~~~~~~~l~Hiaf~   72 (157)
T cd08347           1 GLHGVTLTVRDPEATAAFLTDVLGFREVGEEG-----DRVRLEEGGGGPGAVVDVLEEPDQPR---GRPGAGTVHHVAFR   72 (157)
T ss_pred             CcccEEEEeCCHHHHHHHHHHhcCCEEEeeeC-----CEEEEEecCCCCCCEEEEEeCCCCCC---CcccCCceEEEEEE
Confidence            58999999999999999999999999986543     123444433   45677766431111   11123567899999


Q ss_pred             ECC---HHHHHHHHHhCCCeEEeec--CCceEEEEEcCCCCeEEEEeec
Q 028083          170 IRD---VSKLKMILDKAGISYTLSK--SGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       170 V~d---v~~~~~~l~~~G~~~~~~~--~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      |+|   +++++++|++.|+.+.+..  .+.+.+||+|||||.|||++..
T Consensus        73 v~d~~dvd~~~~~L~~~Gv~~~~~~~~~~~~s~yf~DPdG~~iEl~~~~  121 (157)
T cd08347          73 VPDDEELEAWKERLEALGLPVSGIVDRFYFKSLYFREPGGILFEIATDG  121 (157)
T ss_pred             CCCHHHHHHHHHHHHHCCCCcccccccccEEEEEEECCCCcEEEEEECC
Confidence            997   9999999999999865432  3467899999999999999854

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.77  E-value=1.8e-17  Score=124.08  Aligned_cols=108  Identities=19%  Similarity=0.285  Sum_probs=82.2

Q ss_pred             eeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEEE
Q 028083           90 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  169 (214)
Q Consensus        90 ~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~  169 (214)
                      ++.+++||.|.|+|++++.+||+++|||++....+      ...|+..++....+......          ++..|++|+
T Consensus         3 ~~~~l~~v~l~v~d~~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~~~~i~l~~~~----------~~~~~iaf~   66 (124)
T cd08361           3 ELQDIAYVRLGTRDLAGATRFATDILGLQVAERTA------KATYFRSDARDHTLVYIEGD----------PAEQASGFE   66 (124)
T ss_pred             eEEEeeEEEEeeCCHHHHHHHHHhccCceeccCCC------CeEEEEcCCccEEEEEEeCC----------CceEEEEEE
Confidence            56899999999999999999999999999875422      24677765432222221111          235789999


Q ss_pred             ECC---HHHHHHHHHhCCCeEEeec-------CCceEEEEEcCCCCeEEEEeec
Q 028083          170 IRD---VSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       170 V~d---v~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      |+|   +++++++++++|+++..+.       .+.+++||+|||||.||++..+
T Consensus        67 v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~f~DPdG~~iE~~~~~  120 (124)
T cd08361          67 LRDDDALESAATELEQYGHEVRRGTAEECELRKVKAFIAFRDPSGNSIELVVRP  120 (124)
T ss_pred             ECCHHHHHHHHHHHHHcCCceEEcCHHHhhcCCcceEEEEECcCCCEEEEEEee
Confidence            985   9999999999999986532       3366789999999999998754

This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=99.77  E-value=5.3e-18  Score=131.81  Aligned_cols=111  Identities=14%  Similarity=0.157  Sum_probs=80.7

Q ss_pred             eEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCC-CCCceEEEEEECCe--EEEE--EecCCCCCCCCCCCCCCcceEEE
Q 028083           93 SVHHVGILCENLERSLEFYQNILGLEINEARPHD-KLPYRGAWLWVGAE--MIHL--MELPNPDPLSGRPEHGGRDRHTC  167 (214)
Q Consensus        93 ~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~-~~~~~~~~l~~g~~--~l~l--~~~~~~~~~~~~~~~g~g~~hia  167 (214)
                      +++||+|.|+|++++++||+++|||++......+ ......+|+..++.  .+..  +...        ...+++++|+|
T Consensus         1 ri~Hv~l~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~--------~~~~~g~~Hia   72 (153)
T cd07257           1 RLGHVVLEVPDFAASFDWYTETFGLKPSDVIYLPGPGNPVAAFLRLDRGEEYVDHHTLALA--------QGPESGVHHAA   72 (153)
T ss_pred             CccEEEEecCCHHHHHHHHHHhcCCeEEeeEecCCCCCcEEEEEecCCCCCcccchHHHHh--------cCCCCceeEEE
Confidence            5899999999999999999999999987543221 12235677776431  1110  0000        01146789999


Q ss_pred             EEECCHHHHH---HHHHhCCCeEEeec-----CCceEEEEEcCCCCeEEEEe
Q 028083          168 IAIRDVSKLK---MILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQ  211 (214)
Q Consensus       168 f~V~dv~~~~---~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~iEl~~  211 (214)
                      |.|+|++++.   ++|+++|+++.+++     ....++|++|||||+|||+.
T Consensus        73 f~v~die~~~~~~~~L~~~Gv~v~~~~g~~~~g~~~~~y~~DPdG~~iEl~~  124 (153)
T cd07257          73 FEVHDFDAQGLGHDYLREKGYEHVWGVGRHILGSQIFDYWFDPWGFIVEHYT  124 (153)
T ss_pred             EEcCCHHHHHHHHHHHHHCCCcEeecCCccCCCCCEEEEEECCCCCEEEEEc
Confidence            9999999886   99999999987542     12457899999999999985

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>PRK10291 glyoxalase I; Provisional

Probab=99.77  E-value=9e-18  Score=126.22  Aligned_cols=111  Identities=22%  Similarity=0.351  Sum_probs=80.7

Q ss_pred             EEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECC----eEEEEEecCCCCCCCCCCCCCCcceEEEEEECCH
Q 028083           98 GILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDV  173 (214)
Q Consensus        98 ~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~----~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V~dv  173 (214)
                      +|.|.|+++|.+||+++|||++......+....+.+|+..++    ..+++.....    ......+.+.+|+||.|+|+
T Consensus         1 ~l~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~~g~~~~hlaf~V~d~   76 (129)
T PRK10291          1 MLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWG----VDKYELGTAYGHIALSVDNA   76 (129)
T ss_pred             CEEecCHHHHHHHHHhccCCEEEEeecCCCCcEEEEEEccCCCCCcceEEeeecCC----CCCCcCCCCeeEEEEEeCCH
Confidence            378999999999999999999886544444445667776543    1234432111    11122456788999999999


Q ss_pred             HHHHHHHHhCCCeEEeec----CC-ceEEEEEcCCCCeEEEEee
Q 028083          174 SKLKMILDKAGISYTLSK----SG-RPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       174 ~~~~~~l~~~G~~~~~~~----~g-~~~~~~~DPdG~~iEl~~~  212 (214)
                      ++++++|+++|+++...+    .+ .+.+||+|||||+|||++.
T Consensus        77 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~i~DPdG~~iel~~~  120 (129)
T PRK10291         77 AEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEE  120 (129)
T ss_pred             HHHHHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEEc
Confidence            999999999999876421    23 3567889999999999985

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=99.77  E-value=9.3e-18  Score=126.99  Aligned_cols=110  Identities=23%  Similarity=0.394  Sum_probs=85.2

Q ss_pred             EeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEEEEC--
Q 028083           94 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR--  171 (214)
Q Consensus        94 i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V~--  171 (214)
                      |+||.|.|+|++++.+||+++|||++....+      ..+++..++..+.+......  +  .....++++|++|.|+  
T Consensus         1 i~HV~l~V~Dl~~a~~FY~~~LG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~--~--~~~~~~~~~hiaf~v~~~   70 (131)
T cd08363           1 INHMTFSVSNLDKSISFYKHVFMEKLLVLGE------KTAYFTIGGTWLALNEEPDI--P--RNEIRQSYTHIAFTIEDS   70 (131)
T ss_pred             CceEEEEECCHHHHHHHHHHhhCCEEeccCC------ccceEeeCceEEEEEccCCC--C--cCCcCccceEEEEEecHH
Confidence            6899999999999999999999999875322      23456777777776554321  1  1122456799999998  


Q ss_pred             CHHHHHHHHHhCCCeEEeec----CCceEEEEEcCCCCeEEEEeec
Q 028083          172 DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       172 dv~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      |++++++++++.|+++..++    .+++.+||+|||||+|||.+..
T Consensus        71 dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~f~DPdG~~iEl~~~~  116 (131)
T cd08363          71 EFDAFYTRLKEAGVNILPGRKRDVRDRKSIYFTDPDGHKLEVHTGT  116 (131)
T ss_pred             HHHHHHHHHHHcCCcccCCCccccCcceEEEEECCCCCEEEEecCc
Confidence            59999999999999976432    3578999999999999998753

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=99.77  E-value=9.6e-18  Score=124.55  Aligned_cols=118  Identities=22%  Similarity=0.354  Sum_probs=89.6

Q ss_pred             EeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCC-CCCceEEEEEECCeEEEEEecCCCCCCCC--CCCCCCcceEEEEEE
Q 028083           94 VHHVGILCENLERSLEFYQNILGLEINEARPHD-KLPYRGAWLWVGAEMIHLMELPNPDPLSG--RPEHGGRDRHTCIAI  170 (214)
Q Consensus        94 i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~-~~~~~~~~l~~g~~~l~l~~~~~~~~~~~--~~~~g~g~~hiaf~V  170 (214)
                      ++||.|.|.|++++++||+++|||++....+.. +......|+..++..+.++.+........  ....+.+..|++|.|
T Consensus         1 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~g~~h~~f~v   80 (128)
T cd07249           1 IDHIGIAVPDLEAAIKFYRDVLGVGPWEEEEVPPEQGVRVAFLGLGNVQIELIEPLDDDSPIAKFLEKRGEGLHHIAFEV   80 (128)
T ss_pred             CcEEEEEeCCHHHHHHHHHHhhCCCCccccccCcccccEEEEEEcCCEEEEEEEECCCCCcHHHHHhcCCCceEEEEEEe
Confidence            589999999999999999999999998654432 22344567888888888887654333221  123567889999999


Q ss_pred             CCHHHHHHHHHhCCCeEEeec----CCceEEEEEcCC---CCeEEEEe
Q 028083          171 RDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPD---ANALEFTQ  211 (214)
Q Consensus       171 ~dv~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPd---G~~iEl~~  211 (214)
                      +|+++++++++++|+++..++    .++..+++.||+   |+.|||+|
T Consensus        81 ~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~d~~~~~g~~iE~~~  128 (128)
T cd07249          81 DDIDAALARLKAQGVRLLQEGPRIGAGGKRVAFLHPKDTGGVLIELVE  128 (128)
T ss_pred             CCHHHHHHHHHHCCCeeeccCCCccCCCCEEEEEecCCCceEEEEecC
Confidence            999999999999999986543    235556666555   99999985

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>PLN02300 lactoylglutathione lyase

Probab=99.77  E-value=1.5e-17  Score=141.74  Aligned_cols=122  Identities=25%  Similarity=0.335  Sum_probs=90.0

Q ss_pred             cceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECC--e--EEEEEecCCCCCCCCCCCCCCcc
Q 028083           88 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--E--MIHLMELPNPDPLSGRPEHGGRD  163 (214)
Q Consensus        88 ~~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~--~--~l~l~~~~~~~~~~~~~~~g~g~  163 (214)
                      .+.+.+++||+|.|+|++++++||+++|||++..............|+..++  .  .+.+......    .....+.+.
T Consensus        19 ~~~i~~l~Hv~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~----~~~~~~~g~   94 (286)
T PLN02300         19 KKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSNFVVELTYNYGV----DKYDIGTGF   94 (286)
T ss_pred             ccccceEEEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCcEEEEEEccCCCCCceEEEEeccCCC----CccccCCCc
Confidence            4678999999999999999999999999999976433223334456776543  2  2333321111    112245678


Q ss_pred             eEEEEEECCHHHHHHHHHhCCCeEEeec----CC-ceEEEEEcCCCCeEEEEeec
Q 028083          164 RHTCIAIRDVSKLKMILDKAGISYTLSK----SG-RPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       164 ~hiaf~V~dv~~~~~~l~~~G~~~~~~~----~g-~~~~~~~DPdG~~iEl~~~~  213 (214)
                      .|++|.|+|+++++++++++|+++...+    .+ .+.+||+|||||.|||++..
T Consensus        95 ~hia~~v~dvd~~~~~l~~~G~~i~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~  149 (286)
T PLN02300         95 GHFGIAVEDVAKTVELVKAKGGKVTREPGPVKGGKSVIAFVKDPDGYKFELIQRG  149 (286)
T ss_pred             cEEEEEeCCHHHHHHHHHHCCCeeecCCcccCCCceEEEEEECCCCCEEEEEeCC
Confidence            8999999999999999999999876432    22 46789999999999999864

>cd09014 BphC-JF8_C_like C-terminal, catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.76  E-value=2.3e-17  Score=129.92  Aligned_cols=118  Identities=22%  Similarity=0.358  Sum_probs=84.1

Q ss_pred             ceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEE
Q 028083           89 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  168 (214)
Q Consensus        89 ~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf  168 (214)
                      +.|.+++|++|.|+|++++++||+++|||++..............|+..++....+........      ..++++|+||
T Consensus         2 ~~i~~i~Hi~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~------~~~~~~hiaf   75 (166)
T cd09014           2 VGVRRLDHVNLLASDVDANRDFMEEVLGFRLREQIRLDNGKEAGAWMSVSNKVHDVAYTRDPAG------ARGRLHHLAY   75 (166)
T ss_pred             CCcceeeeEEEEcCCHHHHHHHHHHccCCEEEEEEecCCCceEEEEEeCCCCceeEEEecCCCC------CCCCceEEEE
Confidence            4578999999999999999999999999998755332223334567766443222222211111      1246799999


Q ss_pred             EECC---HHHHHHHHHhCCCeEEeec-----CCceEEEEEcCCCCeEEEEee
Q 028083          169 AIRD---VSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       169 ~V~d---v~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      .|+|   +++++++|+++|+++...+     ....++|++|||||+|||++.
T Consensus        76 ~v~~~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~  127 (166)
T cd09014          76 ALDTREDVLRAADIFLENGIFIEAGPGKHGIQQTFFLYVYEPGGNRVELFGG  127 (166)
T ss_pred             ECCCHHHHHHHHHHHHHcCCccccCCcccCCCCceEEEEECCCCCEEEEEEc
Confidence            9985   5588899999999975332     224579999999999999876

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C. Th

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=99.76  E-value=2e-18  Score=127.63  Aligned_cols=117  Identities=25%  Similarity=0.438  Sum_probs=85.2

Q ss_pred             eEeEEEEEcCCHHHHHHHHHHhcCCEEeeecC--CCCCCceEEEEEECCeEEEEEecCCCCCCCCCCC-CCCcceEEEEE
Q 028083           93 SVHHVGILCENLERSLEFYQNILGLEINEARP--HDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPE-HGGRDRHTCIA  169 (214)
Q Consensus        93 ~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~--~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~-~g~g~~hiaf~  169 (214)
                      ||+||+|.|+|++++.+||+++|||++.....  .........++..++..+.+.....+........ ...+.+|+++.
T Consensus         1 ~l~Hi~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~   80 (128)
T PF00903_consen    1 GLDHIAIRVKDLEKAIDFYTDVLGFRLVEESDNDGEGGDLRIAFLRIGEGHIELFLNPSPPPRASGHSFPEHGGHHIAFL   80 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTTSEEEEEEEEESTTEEEEEEEEESTSSCEEEEEEESSSSSSEEEHHHSHTSEEEEEE
T ss_pred             CeEEEEEEcCCHHHHHHHHHHHhCCcEEeeeccccccccccceeecccccceeeeeeccccccccccccccccceeEEEE
Confidence            68999999999999999999999999996544  2223334566777777777776655543321110 00144677777


Q ss_pred             EC---CHHHHHHHHHhCCCeEEeec-----CCceEEEEEcCCCCeEEE
Q 028083          170 IR---DVSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEF  209 (214)
Q Consensus       170 V~---dv~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~iEl  209 (214)
                      +.   |+++++++|++.|+++.+++     .....+|++|||||.|||
T Consensus        81 ~~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~y~~Dp~G~~iE~  128 (128)
T PF00903_consen   81 AFDVDDLDAAYERLKAQGVEIVEEPDRYYFGSGYSFYFRDPDGNLIEF  128 (128)
T ss_dssp             ESSHHHHHHHHHHHHHTTGEEEEEEEEHSTTCEEEEEEEETTSEEEEE
T ss_pred             eccHHHHHHHHHHHhhcCccEEecCCCCCCCCEEEEEEECCCCCEEEC
Confidence            76   78889999999999987553     235567899999999997

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.76  E-value=4.8e-17  Score=120.80  Aligned_cols=112  Identities=29%  Similarity=0.369  Sum_probs=84.6

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECC--eEEEEEecCCCCCCCCCCCCCCcceEEEEE
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHTCIA  169 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~--~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~  169 (214)
                      ++++||.|.|.|++++++||+++|||++....+      ..+++..++  ..+.+......  . .......+..|++|.
T Consensus         1 ~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~------~~~~l~~~~~~~~l~l~~~~~~--~-~~~~~~~~~~hi~f~   71 (125)
T cd07255           1 TRIGAVTLRVADLERSLAFYQDVLGLEVLERTD------STAVLGTGGKRPLLVLEEDPDA--P-PAPPGATGLYHFAIL   71 (125)
T ss_pred             CEEEEEEEEECCHHHHHHHHHhccCcEEEEcCC------CEEEEecCCCeEEEEEEeCCCC--C-cccCCCCcEEEEEEE
Confidence            479999999999999999999999999986522      235666655  34555443322  1 112234567899999


Q ss_pred             EC---CHHHHHHHHHhCCCeEEeec--CCceEEEEEcCCCCeEEEEee
Q 028083          170 IR---DVSKLKMILDKAGISYTLSK--SGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       170 V~---dv~~~~~~l~~~G~~~~~~~--~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      |+   |+++++++++++|+++..+.  ...+.+||+|||||+|||.+.
T Consensus        72 v~~~~~v~~~~~~l~~~g~~~~~~~~~~~~~~~~~~DPdG~~iEi~~~  119 (125)
T cd07255          72 LPSRADLAAALRRLIELGIPLVGASDHLVSEALYLSDPEGNGIEIYAD  119 (125)
T ss_pred             CCCHHHHHHHHHHHHHcCCceeccccccceeEEEEECCCCCEEEEEEe
Confidence            98   59999999999999876432  225789999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase

Probab=99.76  E-value=3e-17  Score=121.89  Aligned_cols=109  Identities=16%  Similarity=0.200  Sum_probs=80.6

Q ss_pred             eeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEE-CC-eEEEEEecCCCCCCCCCCCCCCcceEEEE
Q 028083           91 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GA-EMIHLMELPNPDPLSGRPEHGGRDRHTCI  168 (214)
Q Consensus        91 i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~-g~-~~l~l~~~~~~~~~~~~~~~g~g~~hiaf  168 (214)
                      +.+++||.|.|+|++++.+||+++|||++....+.     ..+|+.. ++ ....+.....         ...+.+|++|
T Consensus         2 ~~~l~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~---------~~~~~~hiaf   67 (122)
T cd07265           2 VLRPGHVQLRVLDLEEAIKHYREVLGLDEVGRDDQ-----GRVYLKAWDEFDHHSIVLREA---------DTAGLDFMGF   67 (122)
T ss_pred             cceEeEEEEEeCCHHHHHHHHHhccCCEeeeecCC-----ceEEEEccCCCcccEEEeccC---------CCCCeeEEEE
Confidence            47899999999999999999999999998765321     1245554 21 1122221111         1246789999


Q ss_pred             EEC---CHHHHHHHHHhCCCeEEeec-----CCceEEEEEcCCCCeEEEEeec
Q 028083          169 AIR---DVSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       169 ~V~---dv~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      .|+   |+++++++++++|+++...+     ..++.+||+|||||+|||++..
T Consensus        68 ~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~  120 (122)
T cd07265          68 KVLDDADLEKLEARLQAYGVAVERIPAGELPGVGRRVRFQLPSGHTMELYADK  120 (122)
T ss_pred             EeCCHHHHHHHHHHHHHCCCcEEEcccCCCCCCceEEEEECCCCCEEEEEEec
Confidence            997   89999999999999986432     2367899999999999998753

This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.76  E-value=4.1e-17  Score=119.16  Aligned_cols=113  Identities=21%  Similarity=0.321  Sum_probs=82.5

Q ss_pred             EEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEEC---CeEEEEEecCCCCCCCCCCCCCCcceEEEEEECC
Q 028083           96 HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG---AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD  172 (214)
Q Consensus        96 HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g---~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V~d  172 (214)
                      ||+|.|.|++++++||+++|||++....+... ....+++..+   +..+++.....+...  .....++..|++|.|+|
T Consensus         1 Hv~l~v~d~~~~~~fY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~v~d   77 (119)
T cd07263           1 LVSLYVDDQDKALAFYTEKLGFEVREDVPMGG-GFRWVTVAPPGSPETSLVLAPPANPAAM--SGLQPGGTPGLVLATDD   77 (119)
T ss_pred             CceEEeCCHHHHHHHHHhccCeEEEEeeccCC-CcEEEEEeCCCCCeeEEEEeCCCCcccc--ccccCCCceEEEEEehH
Confidence            89999999999999999999999986643111 2222223332   334555544333211  22345667899999999


Q ss_pred             HHHHHHHHHhCCCeEEeec---CCceEEEEEcCCCCeEEEEe
Q 028083          173 VSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQ  211 (214)
Q Consensus       173 v~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdG~~iEl~~  211 (214)
                      +++++++++++|+++..++   .+++.+|++|||||+|||+|
T Consensus        78 i~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~  119 (119)
T cd07263          78 IDATYEELKARGVEFSEEPREMPYGTVAVFRDPDGNLFVLVQ  119 (119)
T ss_pred             HHHHHHHHHhCCCEEeeccccCCCceEEEEECCCCCEEEEeC
Confidence            9999999999999987543   34789999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

Probab=99.76  E-value=4.6e-17  Score=119.70  Aligned_cols=106  Identities=15%  Similarity=0.174  Sum_probs=80.7

Q ss_pred             eeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEEEE
Q 028083           91 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  170 (214)
Q Consensus        91 i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V  170 (214)
                      |.+++||.|.|+|+++|.+||++ |||++.....      ..+|+..++....+......        ..+++.|++|.|
T Consensus         1 ~~~l~hv~l~v~Dl~~s~~FY~~-lGl~~~~~~~------~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~af~v   65 (113)
T cd07267           1 LTDIAHVRFEHPDLDKAERFLTD-FGLEVAARTD------DELYYRGYGTDPFVYVARKG--------EKARFVGAAFEA   65 (113)
T ss_pred             CcEEEEEEEccCCHHHHHHHHHH-cCCEEEEecC------CeEEEecCCCccEEEEcccC--------CcCcccEEEEEE
Confidence            46899999999999999999999 9999875422      24677654322232222111        124678999999


Q ss_pred             CCHHHHHHHHHhCCCeEEee---cCCceEEEEEcCCCCeEEEEe
Q 028083          171 RDVSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQ  211 (214)
Q Consensus       171 ~dv~~~~~~l~~~G~~~~~~---~~g~~~~~~~DPdG~~iEl~~  211 (214)
                      +|.+++.+.+++.|+.....   +.+++.+||+|||||.|||+.
T Consensus        66 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~  109 (113)
T cd07267          66 ASRADLEKAAALPGASVIDDLEAPGGGKRVTLTDPDGFPVELVY  109 (113)
T ss_pred             CCHHHHHHHHHcCCCeeecCCCCCCCceEEEEECCCCCEEEEEe
Confidence            99999999999999987543   345789999999999999975

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=99.75  E-value=5.8e-17  Score=118.61  Aligned_cols=109  Identities=17%  Similarity=0.191  Sum_probs=82.9

Q ss_pred             EeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECC-eEEEEEecCCCCCCCCCCCCCCcceEEEEEECC
Q 028083           94 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA-EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD  172 (214)
Q Consensus        94 i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~-~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V~d  172 (214)
                      +.|+.|.|+|++++++||+++|||++..... ..  ...+++..++ ..+.++......      ...+...|++|.|+|
T Consensus         1 ~~hi~l~v~d~~~s~~FY~~~lG~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~f~v~d   71 (114)
T cd07247           1 PVWFELPTTDPERAKAFYGAVFGWTFEDMGD-GG--GDYAVFSTGGGAVGGLMKAPEPA------AGSPPGWLVYFAVDD   71 (114)
T ss_pred             CEEEEeeCCCHHHHHHHHHhccCceeeeccC-CC--CceEEEEeCCccEEEEecCCCCC------CCCCCeEEEEEEeCC
Confidence            4799999999999999999999999975443 11  2334566664 445555443332      122345799999999


Q ss_pred             HHHHHHHHHhCCCeEEeec----CCceEEEEEcCCCCeEEEEe
Q 028083          173 VSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQ  211 (214)
Q Consensus       173 v~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~~  211 (214)
                      +++++++|+++|+++..++    .+++.++++|||||.|||+|
T Consensus        72 i~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~DPdG~~~~l~~  114 (114)
T cd07247          72 VDAAAARVEAAGGKVLVPPTDIPGVGRFAVFADPEGAVFGLWQ  114 (114)
T ss_pred             HHHHHHHHHHCCCEEEeCCcccCCcEEEEEEECCCCCEEEeEC
Confidence            9999999999999987443    25789999999999999986

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

>cd09013 BphC-JF8_N_like N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.75  E-value=4.3e-17  Score=121.02  Aligned_cols=110  Identities=20%  Similarity=0.280  Sum_probs=81.8

Q ss_pred             ceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECC-eEEEEEecCCCCCCCCCCCCCCcceEEE
Q 028083           89 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA-EMIHLMELPNPDPLSGRPEHGGRDRHTC  167 (214)
Q Consensus        89 ~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~-~~l~l~~~~~~~~~~~~~~~g~g~~hia  167 (214)
                      |.+.+++|+.|.|+|++++.+||+++|||++....+      ..+|+..++ ...+.+.....        ...+++|++
T Consensus         2 ~~i~~i~hv~l~v~dl~~a~~FY~~~lG~~~~~~~~------~~~~l~~~~~~~~~~~~l~~~--------~~~~~~h~a   67 (121)
T cd09013           2 FDIAHLAHVELLTPKPEESLWFFTDVLGLEETGREG------QSVYLRAWGDYEHHSLKLTES--------PEAGLGHIA   67 (121)
T ss_pred             CCccEeeEEEEEeCCHHHHHHHHHhCcCCEEEeecC------CeEEEEeccCCCccEEEEeeC--------CCCceEEEE
Confidence            456899999999999999999999999999886532      235665532 11111111111        124689999


Q ss_pred             EEEC---CHHHHHHHHHhCCCeEEee---cCCceEEEEEcCCCCeEEEEee
Q 028083          168 IAIR---DVSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       168 f~V~---dv~~~~~~l~~~G~~~~~~---~~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      |.|+   |+++++++++++|+++.+.   +..+..+||+|||||.||++..
T Consensus        68 f~v~~~~~v~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~  118 (121)
T cd09013          68 WRASSPEALERRVAALEASGLGIGWIEGDPGHGKAYRFRSPDGHPMELYWE  118 (121)
T ss_pred             EEcCCHHHHHHHHHHHHHcCCccccccCCCCCcceEEEECCCCCEEEEEEe
Confidence            9997   6889999999999987532   2346789999999999999864

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C

>cd08355 Glo_EDI_BRP_like_14 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.75  E-value=1.1e-16  Score=118.65  Aligned_cols=116  Identities=16%  Similarity=0.186  Sum_probs=84.1

Q ss_pred             EEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEEEECCHHHH
Q 028083           97 VGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKL  176 (214)
Q Consensus        97 V~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V~dv~~~  176 (214)
                      -.|.|.|++++++||+++|||++....+.+......+.+..++..+.+...............+++..|++|.|+|++++
T Consensus         3 p~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~d~d~~   82 (122)
T cd08355           3 PTLRYRDAAAAIDWLTDAFGFEERLVVPDDDGGVAHAELRFGDGGVMVGSVRDDYRASSARAGGAGTQGVYVVVDDVDAH   82 (122)
T ss_pred             EEEEECCHHHHHHHHHHhcCCEEEEEEeCCCCcEEEEEEEECCEEEEEecCCCcccccccccCCCceEEEEEEECCHHHH
Confidence            46889999999999999999999865433333323345677776666654433221111112334557999999999999


Q ss_pred             HHHHHhCCCeEEeec----CCceEEEEEcCCCCeEEEEee
Q 028083          177 KMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       177 ~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      +++++++|+++..++    .|.+.++++|||||+|+|.++
T Consensus        83 ~~~l~~~G~~v~~~~~~~~~g~~~~~~~DPdG~~~~l~~~  122 (122)
T cd08355          83 YERARAAGAEILREPTDTPYGSREFTARDPEGNLWTFGTY  122 (122)
T ss_pred             HHHHHHCCCEEeeCccccCCCcEEEEEECCCCCEEEEecC
Confidence            999999999986432    467889999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.75  E-value=2.9e-17  Score=121.43  Aligned_cols=116  Identities=21%  Similarity=0.406  Sum_probs=84.2

Q ss_pred             eEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCC-CceEEEEEE----CCeEEEEEecCCCCCCCCCCCCCCcceEEE
Q 028083           93 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKL-PYRGAWLWV----GAEMIHLMELPNPDPLSGRPEHGGRDRHTC  167 (214)
Q Consensus        93 ~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~-~~~~~~l~~----g~~~l~l~~~~~~~~~~~~~~~g~g~~hia  167 (214)
                      +++||+|.|.|++++++||+++|||++....+.... .....++..    ++..+.++........  ......+..|++
T Consensus         1 ~i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~--~~~~~~~~~hi~   78 (126)
T cd08346           1 GLHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWPDAGPK--GRRGPGQIHHIA   78 (126)
T ss_pred             CcccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEecCCCCCC--CCCCCCcEEEEE
Confidence            579999999999999999999999998865432221 122233332    3456777765433221  122335678999


Q ss_pred             EEEC---CHHHHHHHHHhCCCeEEee--cCCceEEEEEcCCCCeEEEE
Q 028083          168 IAIR---DVSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFT  210 (214)
Q Consensus       168 f~V~---dv~~~~~~l~~~G~~~~~~--~~g~~~~~~~DPdG~~iEl~  210 (214)
                      |.|+   |+++++++++++|+++...  ..+.+.+||+|||||+|||.
T Consensus        79 f~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~DP~G~~iE~~  126 (126)
T cd08346          79 FSVPSEASLDAWRERLRAAGVPVSGVVDHFGERSIYFEDPDGLRLELT  126 (126)
T ss_pred             EEcCCHHHHHHHHHHHHHcCCcccceEeecceEEEEEECCCCCEEEeC
Confidence            9998   5799999999999987543  34678999999999999984

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.75  E-value=5.4e-17  Score=120.56  Aligned_cols=108  Identities=18%  Similarity=0.214  Sum_probs=81.4

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEEEEC
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR  171 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V~  171 (214)
                      +++.||+|.|+|+++|.+||+++|||++....+  .   ...|+..++..+.+.....+         ..+..|++|.++
T Consensus         1 ~~l~~v~l~v~Dl~~s~~FY~~~LG~~~~~~~~--~---~~~~~~~~~~~~~~~l~~~~---------~~~~~~~~f~v~   66 (120)
T cd07252           1 KSLGYLGVESSDLDAWRRFATDVLGLQVGDRPE--D---GALYLRMDDRAWRIAVHPGE---------ADDLAYAGWEVA   66 (120)
T ss_pred             CcccEEEEEeCCHHHHHHHHHhccCceeccCCC--C---CeEEEEccCCceEEEEEeCC---------CCceeEEEEEEC
Confidence            368999999999999999999999999875422  1   24566665544444332221         135689999997


Q ss_pred             ---CHHHHHHHHHhCCCeEEeec-------CCceEEEEEcCCCCeEEEEeec
Q 028083          172 ---DVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       172 ---dv~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                         |+++++++|+++|+++...+       .+++++||+|||||.|||+.-+
T Consensus        67 ~~~dl~~~~~~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~  118 (120)
T cd07252          67 DEAALDALAARLRAAGVAVEEGSAELAAERGVEGLIRFADPDGNRHELFWGP  118 (120)
T ss_pred             CHHHHHHHHHHHHHcCCeEEEcCHHHHhhCCCcEEEEEECCCCCEEEEEecc
Confidence               59999999999999987532       2357899999999999998643

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>cd07256 HPCD_C_class_II C-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD), which catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate; belongs to the type I class II family of extradiol dioxygenases

Probab=99.74  E-value=8e-17  Score=126.16  Aligned_cols=112  Identities=21%  Similarity=0.328  Sum_probs=79.6

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEEEEC
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR  171 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V~  171 (214)
                      ++++||+|.|+|++++++||+++|||++..............|+..++....+.... .        .+++++|+||.|+
T Consensus         2 ~~l~Hv~l~V~Dl~~s~~FY~~vLGl~~~~~~~~~~~~~~~~~l~~~~~~~~i~l~~-~--------~~~~~~Hiaf~v~   72 (161)
T cd07256           2 QRLDHFNLRVPDVDAGLAYYRDELGFRVSEYTEDDDGTTWAAWLHRKGGVHDTALTG-G--------NGPRLHHVAFWVP   72 (161)
T ss_pred             ceEEEEEEecCCHHHHHHHHHhccCCEEEEEeccCCCcEEEEEEecCCCcceEEEec-C--------CCCceeEEEEEcC
Confidence            689999999999999999999999999875432222223446665543222221111 1        2346899999998


Q ss_pred             C---HHHHHHHHHhCCCeE--Eee--c---CCceEEEEEcCCCCeEEEEee
Q 028083          172 D---VSKLKMILDKAGISY--TLS--K---SGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       172 d---v~~~~~~l~~~G~~~--~~~--~---~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      |   +++++++|+++|+..  ...  .   .+.+++||+|||||.|||++.
T Consensus        73 ~~~~v~~~~~~L~~~G~~~~~~~~p~~~g~~~~~~~y~~DPdG~~iEl~~~  123 (161)
T cd07256          73 EPHNIIRTCDLLAAAGYSDRIERGPGRHGISNAFFLYLRDPDGHRIEIYTG  123 (161)
T ss_pred             CHHHHHHHHHHHHHcCCCcccccCCCccCCCCceEEEEECCCCCeEEEeec
Confidence            5   888899999999863  221  1   235689999999999999853

This subfamily contains the C-terminal, catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of

>cd07244 FosA FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

Probab=99.74  E-value=5.1e-17  Score=120.77  Aligned_cols=106  Identities=26%  Similarity=0.424  Sum_probs=81.7

Q ss_pred             eEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEEEEC-
Q 028083           93 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR-  171 (214)
Q Consensus        93 ~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V~-  171 (214)
                      +++||.|.|+|++++.+||+++|||++....+      ...|+..++..+.+......       ...++..|++|.++ 
T Consensus         1 ~i~hv~l~v~d~~~~~~FY~~vLG~~~~~~~~------~~~~~~~~~~~~~l~~~~~~-------~~~~~~~hi~f~v~~   67 (121)
T cd07244           1 GINHITLAVSDLERSVAFYVDLLGFKLHVRWD------KGAYLEAGDLWLCLSVDANV-------GPAKDYTHYAFSVSE   67 (121)
T ss_pred             CcceEEEEECCHHHHHHHHHHhcCCEEEEecC------CceEEecCCEEEEEecCCCC-------CCCCCeeeEEEEeCH
Confidence            58999999999999999999999999876533      12566666655544322211       01345789999994 


Q ss_pred             -CHHHHHHHHHhCCCeEEeec-CCceEEEEEcCCCCeEEEEe
Q 028083          172 -DVSKLKMILDKAGISYTLSK-SGRPAIFTRDPDANALEFTQ  211 (214)
Q Consensus       172 -dv~~~~~~l~~~G~~~~~~~-~g~~~~~~~DPdG~~iEl~~  211 (214)
                       |+++++++++++|+++.... ..++.+||.|||||+|||++
T Consensus        68 ~dl~~~~~~l~~~G~~~~~~~~~~~~~~~f~DPdG~~ie~~~  109 (121)
T cd07244          68 EDFASLKEKLRQAGVKEWKENTSEGDSFYFLDPDGHKLELHV  109 (121)
T ss_pred             HHHHHHHHHHHHcCCcccCCCCCCccEEEEECCCCCEEEEEe
Confidence             89999999999999876443 34679999999999999986

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=99.74  E-value=1.8e-16  Score=119.52  Aligned_cols=113  Identities=25%  Similarity=0.363  Sum_probs=84.1

Q ss_pred             eEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEEC---CeEEEEEecCCCCCCCCCCCCCCcceEEEEE
Q 028083           93 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG---AEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  169 (214)
Q Consensus        93 ~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g---~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~  169 (214)
                      +|+||.|.|+|++++++||+++|||++....+.    ....|+..+   +..+.++.......    .....+..|++|.
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~----~~~~~~~~~~~~~~~l~l~~~~~~~~----~~~~~~~~h~~f~   72 (134)
T cd08348           1 RLSHVVLYVRDLEAMVRFYRDVLGFTVTDRGPL----GGLVFLSRDPDEHHQIALITGRPAAP----PPGPAGLNHIAFE   72 (134)
T ss_pred             CeeEEEEEecCHHHHHHHHHHhcCCEEEeeccC----CcEEEEEecCCCceEEEEEecCCCCC----CCCCCCceEEEEE
Confidence            589999999999999999999999998865432    134566554   23566655433211    1234567899999


Q ss_pred             ECCHH---HHHHHHHhCCCeEEeec--CCceEEEEEcCCCCeEEEEeec
Q 028083          170 IRDVS---KLKMILDKAGISYTLSK--SGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       170 V~dv~---~~~~~l~~~G~~~~~~~--~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      |+|++   ++++++.+.|+++....  .+++.+|++|||||+|||++..
T Consensus        73 v~~~~~v~~~~~~l~~~G~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  121 (134)
T cd08348          73 VDSLDDLRDLYERLRAAGITPVWPVDHGNAWSIYFRDPDGNRLELFVDT  121 (134)
T ss_pred             eCCHHHHHHHHHHHHHCCCCccccCCCCceeEEEEECCCCCEEEEEEcC
Confidence            99765   58899999999876532  3478899999999999999753

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=99.74  E-value=9.5e-17  Score=121.67  Aligned_cols=106  Identities=20%  Similarity=0.349  Sum_probs=79.9

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECC--e--EEEEEecCCCCCCCCCCCCCCcceEEE
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--E--MIHLMELPNPDPLSGRPEHGGRDRHTC  167 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~--~--~l~l~~~~~~~~~~~~~~~g~g~~hia  167 (214)
                      .+++||+|.|.|++++.+||+++|||++.....     ...+|+..++  .  .+.+.....         ...+++|+|
T Consensus         2 ~~l~hi~l~v~dl~~s~~FY~~vlGl~~~~~~~-----~~~~~~~~~~~~~~~~i~l~~~~~---------~~~g~~hia   67 (134)
T cd08360           2 RRLGHVVLFVPDVEAAEAFYRDRLGFRVSDRFK-----GRGAFLRAAGGGDHHNLFLIKTPA---------PMAGFHHAA   67 (134)
T ss_pred             ceeeEEEEEcCCHHHHHHHHHHhcCCEEEEEec-----CcEEEEECCCCCCCcEEEEecCCC---------CCCcceEEE
Confidence            579999999999999999999999999875432     1346776642  2  333332211         135789999


Q ss_pred             EEECCHHHHH---HHHHhCCCeEEeec-----CCceEEEEEcCCCCeEEEEe
Q 028083          168 IAIRDVSKLK---MILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQ  211 (214)
Q Consensus       168 f~V~dv~~~~---~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~iEl~~  211 (214)
                      |.|+|++++.   ++|+++|+++...+     .+.+++||+||+||+|||..
T Consensus        68 f~v~d~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~y~~DP~G~~iEl~~  119 (134)
T cd08360          68 FEVGDIDEVMLGGNHMLRAGYQTGWGPGRHRIGSNYFWYFRDPWGGEVEYGA  119 (134)
T ss_pred             EEeCCHHHHHHHHHHHHHcCCccccCCCCcCCCccEEEEEECCCCCEEEEEc
Confidence            9999888665   69999999976432     23567999999999999985

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.74  E-value=7.2e-17  Score=125.54  Aligned_cols=111  Identities=17%  Similarity=0.288  Sum_probs=82.4

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCC---CCCceEEEEEECCe--EEEEEecCCCCCCCCCCCCCCcceEE
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEARPHD---KLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHT  166 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~---~~~~~~~~l~~g~~--~l~l~~~~~~~~~~~~~~~g~g~~hi  166 (214)
                      ++++||+|.|+|++++.+||+++|||++.......   +.....+|++.++.  .+.+...  +        .+.+++|+
T Consensus         8 ~~l~Hi~l~v~Dl~~a~~FY~~~LGl~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~--~--------~~~g~~Hi   77 (154)
T cd07237           8 QGLGHVVLATPDPDEAHAFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCNGRHHSLALAEG--P--------GPKRIHHL   77 (154)
T ss_pred             CccCEEEEEeCCHHHHHHHHHHccCCEEEEEEcccCCCCCcceEEEEEeCCCCCCEEEEcC--C--------CCceeEEE
Confidence            68999999999999999999999999987532211   12334667776542  2333221  1        13578999


Q ss_pred             EEEECCHH---HHHHHHHhCCCeEEeec-----CCceEEEEEcCCCCeEEEEee
Q 028083          167 CIAIRDVS---KLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       167 af~V~dv~---~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      +|.|+|++   +++++|+++|+++....     .+.+.+|++|||||+|||...
T Consensus        78 af~V~d~~~l~~~~~~L~~~G~~v~~~~~~~~~~~~~~~y~~DPdG~~iEl~~~  131 (154)
T cd07237          78 MLEVTSLDDVGRAYDRVRARGIPIAMTLGRHTNDRMLSFYVRTPSGFAIEYGWG  131 (154)
T ss_pred             EEEcCCHHHHHHHHHHHHHcCCceeccCCccCCCCcEEEEEECCCCcEEEeccC
Confidence            99998655   68999999999986432     246889999999999999753

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

Probab=99.74  E-value=8.4e-17  Score=118.67  Aligned_cols=109  Identities=21%  Similarity=0.300  Sum_probs=81.9

Q ss_pred             eeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEEEE
Q 028083           91 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  170 (214)
Q Consensus        91 i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V  170 (214)
                      +.+|+|+.|.|+|++++++||+++|||++....+      ..+|+..++...+++......        .++..|++|.|
T Consensus         1 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~v   66 (120)
T cd08362           1 VTALRGVGLGVPDLAAAAAFYREVWGLSVVAEDD------GIVYLRATGSEHHILRLRRSD--------RNRLDVVSFSV   66 (120)
T ss_pred             CceeeEEEEecCCHHHHHHHHHhCcCcEEEEecC------CEEEEECCCCccEEEEeccCC--------CCCCceEEEEe
Confidence            4689999999999999999999999999875432      235666544333333322111        13568999999


Q ss_pred             C---CHHHHHHHHHhCCCeEEeec------CCceEEEEEcCCCCeEEEEeec
Q 028083          171 R---DVSKLKMILDKAGISYTLSK------SGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       171 ~---dv~~~~~~l~~~G~~~~~~~------~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      +   ++++++++++++|+++..++      .+++.++|+||+||.|||++..
T Consensus        67 ~~~~~l~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~  118 (120)
T cd08362          67 ASRADVDALARQVAARGGTVLSEPGATDDPGGGYGFRFFDPDGRLIEFSADV  118 (120)
T ss_pred             CCHHHHHHHHHHHHHcCCceecCCcccCCCCCceEEEEECCCCCEEEEEecc
Confidence            5   78999999999999986432      2478899999999999998743

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge

>cd08351 ChaP_like ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha); and similar proteins

Probab=99.73  E-value=1.4e-16  Score=118.82  Aligned_cols=107  Identities=21%  Similarity=0.304  Sum_probs=80.7

Q ss_pred             eeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEE-CCeEEEEEecCCCCCCCCCCCCCCcceEEEEE
Q 028083           91 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  169 (214)
Q Consensus        91 i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~-g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~  169 (214)
                      ..+++|+.|.|.|+++|++||+++|||+......      ..+++.. ++..+.+.....          ..+..|++|.
T Consensus         2 ~~~~~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~l~~~~~~~----------~~~~~h~a~~   65 (123)
T cd08351           2 TVTLNHTIVPARDREASAEFYAEILGLPWAKPFG------PFAVVKLDNGVSLDFAQPDG----------EIPPQHYAFL   65 (123)
T ss_pred             cceEeEEEEEcCCHHHHHHHHHHhcCCEeeeccC------CEEEEEcCCCcEEEEecCCC----------CCCcceEEEE
Confidence            3689999999999999999999999999876321      1233443 333455443211          1235799999


Q ss_pred             EC--CHHHHHHHHHhCCCeEEee-----------cCCceEEEEEcCCCCeEEEEeec
Q 028083          170 IR--DVSKLKMILDKAGISYTLS-----------KSGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       170 V~--dv~~~~~~l~~~G~~~~~~-----------~~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      |+  |+++++++++++|+++...           ..|++.+||+|||||.|||++.|
T Consensus        66 v~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~f~DPdG~~iEl~~~~  122 (123)
T cd08351          66 VSEEEFDRIFARIRERGIDYWADPQRTEPGQINTNDGGRGVYFLDPDGHLLEIITRP  122 (123)
T ss_pred             eCHHHHHHHHHHHHHcCCceecCCcccccccccCCCCeeEEEEECCCCCEEEEEecc
Confidence            97  6999999999999997432           24679999999999999999875

ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07246 Glo_EDI_BRP_like_8 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.73  E-value=4.2e-16  Score=114.85  Aligned_cols=113  Identities=19%  Similarity=0.175  Sum_probs=84.0

Q ss_pred             EEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEEEECCHHHH
Q 028083           97 VGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKL  176 (214)
Q Consensus        97 V~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V~dv~~~  176 (214)
                      ..|+|.|++++.+||+++|||++.............+++..++..+.+........  .....+++..|++|.|+|++++
T Consensus         5 ~~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~v~d~~~~   82 (122)
T cd07246           5 PYLIVRDAAAAIDFYKKAFGAEELERMPDDDGRVMHAELRIGDSVLMLADEFPEHG--SPASWGGTPVSLHLYVEDVDAT   82 (122)
T ss_pred             EEEEECCHHHHHHHHHHhhCCEEEEEEeCCCCCEEEEEEEECCEEEEEecCCcccC--CCCCCCCceEEEEEEeCCHHHH
Confidence            45889999999999999999999865432233333445677777777764322211  1112345567999999999999


Q ss_pred             HHHHHhCCCeEEee----cCCceEEEEEcCCCCeEEEEe
Q 028083          177 KMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  211 (214)
Q Consensus       177 ~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~iEl~~  211 (214)
                      ++++.+.|+++..+    ..|.+.++++|||||.|||.|
T Consensus        83 ~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~G~~~~l~~  121 (122)
T cd07246          83 FARAVAAGATSVMPPADQFWGDRYGGVRDPFGHRWWIAT  121 (122)
T ss_pred             HHHHHHCCCeEecCcccccccceEEEEECCCCCEEEEec
Confidence            99999999987543    346789999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd09011 Glo_EDI_BRP_like_23 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.72  E-value=1.8e-16  Score=117.49  Aligned_cols=113  Identities=14%  Similarity=0.140  Sum_probs=76.6

Q ss_pred             eEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEEEECC
Q 028083           93 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD  172 (214)
Q Consensus        93 ~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V~d  172 (214)
                      ++.|+.|.|.|+++|.+||+++|||++....+  .   . ..+ .++..+.+...............+.+..|++|.|+|
T Consensus         2 ~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~--~---~-~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~v~d   74 (120)
T cd09011           2 KFKNPLLVVKDIEKSKKFYEKVLGLKVVMDFG--E---N-VTF-EGGFALQEGYSWLEGISKADIIEKSNNFELYFEEED   74 (120)
T ss_pred             EEEEEEEEECCHHHHHHHHHHhcCCEEeeccC--c---e-EEE-eccceeccchhhhccCCcccccccCCceEEEEEehh
Confidence            68899999999999999999999999875322  1   1 112 223222221110000000111123445799999999


Q ss_pred             HHHHHHHHHhCCC-eEEee----cCCceEEEEEcCCCCeEEEEee
Q 028083          173 VSKLKMILDKAGI-SYTLS----KSGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       173 v~~~~~~l~~~G~-~~~~~----~~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      +++++++|+++|. ++..+    +.|.+.++|+|||||.|||.+.
T Consensus        75 vd~~~~~l~~~g~~~~~~~~~~~~~g~r~~~~~DPdGn~iei~~~  119 (120)
T cd09011          75 FDAFLDKLKRYDNIEYVHPIKEHPWGQRVVRFYDPDKHIIEVGES  119 (120)
T ss_pred             hHHHHHHHHhcCCcEEecCcccCCCccEEEEEECCCCCEEEEecc
Confidence            9999999999985 56432    2467899999999999999875

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=99.72  E-value=2e-16  Score=115.88  Aligned_cols=107  Identities=21%  Similarity=0.291  Sum_probs=82.8

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEEC-CeEEEEEecCCCCCCCCCCCCCCcceEEEEEE
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  170 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g-~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V  170 (214)
                      ++++|+.|.|.|++++.+||+++|||++....+      ..+|+..+ +..+.+.....+         ..+..|++|.|
T Consensus         1 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~---------~~~~~h~~~~v   65 (117)
T cd07240           1 RRIAYAELEVPDLERALEFYTDVLGLTVLDRDA------GSVYLRCSEDDHHSLVLTEGD---------EPGVDALGFEV   65 (117)
T ss_pred             CceeEEEEecCCHHHHHHHHHhccCcEEEeecC------CeEEEecCCCCcEEEEEEeCC---------CCCceeEEEEc
Confidence            378999999999999999999999999986542      23677765 333333322111         13578999999


Q ss_pred             C---CHHHHHHHHHhCCCeEEeec----CCceEEEEEcCCCCeEEEEeec
Q 028083          171 R---DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       171 ~---dv~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      +   ++++++++++++|+++...+    .+++.+||.||+||+||++...
T Consensus        66 ~~~~~v~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  115 (117)
T cd07240          66 ASEEDLEALAAHLEAAGVAPEEASDPEPGVGRGLRFQDPDGHLLELFVEA  115 (117)
T ss_pred             CCHHHHHHHHHHHHHcCCceEEcCccCCCCceEEEEECCCCCEEEEEEcc
Confidence            8   68999999999999986543    3578999999999999998643

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>cd07264 Glo_EDI_BRP_like_15 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.72  E-value=2.7e-16  Score=116.64  Aligned_cols=115  Identities=17%  Similarity=0.184  Sum_probs=80.6

Q ss_pred             EeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCC--CCC----CCCCCCCcceEEE
Q 028083           94 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPD--PLS----GRPEHGGRDRHTC  167 (214)
Q Consensus        94 i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~--~~~----~~~~~g~g~~hia  167 (214)
                      +.|+.|+|.|++++.+||+++|||++....+..    ....+..++..+.+.......  ...    ..+...++..|++
T Consensus         1 ~~~~~l~v~D~~~s~~FY~~~lG~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (125)
T cd07264           1 FGYTIIYVEDVEKTLEFYERAFGFERRFLHESG----DYGELETGETTLAFASHDLAESNLKGGFVKADPAQPPAGFEIA   76 (125)
T ss_pred             CceEEEEEcCHHHHHHHHHHhhCCeEEeecCCC----cEEEecCCcEEEEEEcccccccccccCccCCccccCCCcEEEE
Confidence            469999999999999999999999987533211    112244555555554332111  000    1111223346899


Q ss_pred             EEECCHHHHHHHHHhCCCeEEee----cCCceEEEEEcCCCCeEEEEee
Q 028083          168 IAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       168 f~V~dv~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      |.|+|++++++++.++|+++..+    ..|.+.++++|||||.|||.++
T Consensus        77 ~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~~~~~~~  125 (125)
T cd07264          77 FVTDDVAAAFARAVEAGAVLVSEPKEKPWGQTVAYVRDINGFLIELCSP  125 (125)
T ss_pred             EEcCCHHHHHHHHHHcCCEeccCCccCCCCcEEEEEECCCCCEEEEecC
Confidence            99999999999999999987543    2456789999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08345 Fosfomycin_RP Fosfomycin resistant protein; inhibits the biological function of fosfomycin

Probab=99.72  E-value=1.4e-16  Score=116.26  Aligned_cols=104  Identities=23%  Similarity=0.414  Sum_probs=79.4

Q ss_pred             EEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEEEEC--CH
Q 028083           96 HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR--DV  173 (214)
Q Consensus        96 HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V~--dv  173 (214)
                      ||.|.|+|++++.+||+++|||++....+      ...|+..++..+.+.......      ..+.+.+|++|.|+  |+
T Consensus         1 Hv~l~v~d~~~s~~Fy~~~lg~~~~~~~~------~~~~~~~~~~~l~~~~~~~~~------~~~~~~~hiaf~v~~~d~   68 (113)
T cd08345           1 HITLIVKDLNKSIAFYRDILGAELIYSSS------KEAYFELAGLWICLMEEDSLQ------GPERTYTHIAFQIQSEEF   68 (113)
T ss_pred             CeeEEECCHHHHHHHHHHhcCCeeeeccC------ceeEEEecCeEEEeccCCCcC------CCCCCccEEEEEcCHHHH
Confidence            89999999999999999999999875432      235566666555544332211      12345689999995  79


Q ss_pred             HHHHHHHHhCCCeEEeec----CCceEEEEEcCCCCeEEEEe
Q 028083          174 SKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQ  211 (214)
Q Consensus       174 ~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~~  211 (214)
                      ++++++++++|+++....    .+++.+|++|||||+|||++
T Consensus        69 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iEi~~  110 (113)
T cd08345          69 DEYTERLKALGVEMKPERPRVQGEGRSIYFYDPDGHLLELHA  110 (113)
T ss_pred             HHHHHHHHHcCCccCCCccccCCCceEEEEECCCCCEEEEEe
Confidence            999999999999986431    25789999999999999985

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.71  E-value=5.7e-16  Score=132.64  Aligned_cols=116  Identities=21%  Similarity=0.332  Sum_probs=81.8

Q ss_pred             cceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCc-eEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEE
Q 028083           88 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPY-RGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT  166 (214)
Q Consensus        88 ~~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~-~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hi  166 (214)
                      .+.+++++||+|.|+|++++.+||+++|||++........... ...|+..++.. +.+.....      + ..++++|+
T Consensus       140 ~~~~~~i~Hi~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~------~-~~g~~~Hi  211 (303)
T TIGR03211       140 GVGARRLDHCLLYGEDVAENTRFFTEVLGFRLTEQVVLGDGKEQAAAWLSVSNKA-HDIAFVGD------P-EPGKLHHV  211 (303)
T ss_pred             CcCceeEEEEeEEeCCHHHHHHHHHHhcCCEEEeeEEcCCCcEEEEEEEEcCCCC-cccceecC------C-CCCceEEE
Confidence            4557899999999999999999999999999875432222222 34566554321 11111111      0 11348999


Q ss_pred             EEEECC---HHHHHHHHHhCCCeEEeec--C---CceEEEEEcCCCCeEEEEe
Q 028083          167 CIAIRD---VSKLKMILDKAGISYTLSK--S---GRPAIFTRDPDANALEFTQ  211 (214)
Q Consensus       167 af~V~d---v~~~~~~l~~~G~~~~~~~--~---g~~~~~~~DPdG~~iEl~~  211 (214)
                      ||.|+|   +++++++|+++|+++..++  .   +.+++||+|||||+|||++
T Consensus       212 af~v~~~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~  264 (303)
T TIGR03211       212 SFFLDSWEDVLKAADVMSKNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFG  264 (303)
T ss_pred             EEEcCCHHHHHHHHHHHHhCCCceeeCCcccCCCCceEEEEECCCCCEEEEec
Confidence            999996   6668899999999986543  2   2579999999999999973

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.71  E-value=5.9e-16  Score=114.06  Aligned_cols=109  Identities=17%  Similarity=0.168  Sum_probs=78.5

Q ss_pred             EEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECC--eEEEEEecCCCCCC-CCCCCCCCcceEEEEEECC
Q 028083           96 HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPL-SGRPEHGGRDRHTCIAIRD  172 (214)
Q Consensus        96 HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~--~~l~l~~~~~~~~~-~~~~~~g~g~~hiaf~V~d  172 (214)
                      +..|.|+|++++.+||+++|||++....+      ....+..++  ..+.+........+ ...+..+.+ .|++|.|+|
T Consensus         4 ~~~l~v~D~~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~-~~~~~~v~d   76 (119)
T cd08359           4 YPVIVTDDLAETADFYVRHFGFTVVFDSD------WYVSLRSPDGGVELAFMLPGHETVPAAQYQFQGQG-LILNFEVDD   76 (119)
T ss_pred             eeEEEECCHHHHHHHHHHhhCcEEEeccC------cEEEEecCCCceEEEEccCCCCCCcchhcccCCce-EEEEEEECC
Confidence            57899999999999999999999886422      223455443  34445433222111 111223344 489999999


Q ss_pred             HHHHHHHHHhCCCeEEeec----CCceEEEEEcCCCCeEEEEe
Q 028083          173 VSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQ  211 (214)
Q Consensus       173 v~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~~  211 (214)
                      +++++++++++|+++..++    .|.+.++++|||||+|||+|
T Consensus        77 id~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~G~~ie~~~  119 (119)
T cd08359          77 VDAEYERLKAEGLPIVLPLRDEPWGQRHFIVRDPNGVLIDIVQ  119 (119)
T ss_pred             HHHHHHHHHhcCCCeeeccccCCCcceEEEEECCCCCEEEEEC
Confidence            9999999999999875432    45689999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08343 ED_TypeI_classII_C C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

Probab=99.71  E-value=6.1e-16  Score=116.61  Aligned_cols=108  Identities=19%  Similarity=0.322  Sum_probs=81.0

Q ss_pred             eEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeE--EEEEecCCCCCCCCCCCCCCcceEEEEEECC
Q 028083           95 HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEM--IHLMELPNPDPLSGRPEHGGRDRHTCIAIRD  172 (214)
Q Consensus        95 ~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~--l~l~~~~~~~~~~~~~~~g~g~~hiaf~V~d  172 (214)
                      +||.|.|+|++++.+||+++|||++......+ .....+|+..++..  +.+...  .        ..+++.|++|.|+|
T Consensus         1 ~Hv~l~V~dl~~a~~Fy~~~lG~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~--~--------~~~~~~hl~~~v~d   69 (131)
T cd08343           1 DHVVLRTPDVAATAAFYTEVLGFRVSDRVGDP-GVDAAAFLRCDEDHHDLALFPG--P--------ERPGLHHVAFEVES   69 (131)
T ss_pred             CcEEEEcCCHHHHHHHHHhcCCCEEEEEEccC-CceeEEEEEcCCCcceEEEEcC--C--------CCCCeeEEEEEcCC
Confidence            69999999999999999999999987553322 22355677765532  333321  1        13568999999998


Q ss_pred             HH---HHHHHHHhCCCeEEeec-----CCceEEEEEcCCCCeEEEEeec
Q 028083          173 VS---KLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       173 v~---~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      ++   +++++++++|+++...+     .+.++++|+|||||+|||++..
T Consensus        70 ~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~DPdG~~iei~~~~  118 (131)
T cd08343          70 LDDILRAADRLAANGIQIEFGPGRHGPGNNLFLYFRDPDGNRVELSAEM  118 (131)
T ss_pred             HHHHHHHHHHHHHcCCeeEECCCccCCCCcEEEEEECCCCCEEEEEcCC
Confidence            75   78899999999986432     2357899999999999998753

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are

>cd07239 BphC5-RK37_C_like C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

Probab=99.70  E-value=5.5e-16  Score=119.35  Aligned_cols=106  Identities=16%  Similarity=0.289  Sum_probs=79.9

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCe--EEEEEecCCCCCCCCCCCCCCcceEEEEE
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIA  169 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~--~l~l~~~~~~~~~~~~~~~g~g~~hiaf~  169 (214)
                      .+++||.|.|.|++++.+||+++|||++.....     ....|+..++.  .+.+...           ..++++|++|.
T Consensus         3 ~~l~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~-----~~~~~l~~~~~~~~~~l~~~-----------~~~~~~hiaf~   66 (144)
T cd07239           3 VKISHVVLNSPDVDKTVAFYEDVLGFRVSDWLG-----DQMAFLRCNSDHHSIAIARG-----------PHPSLNHVAFE   66 (144)
T ss_pred             ceeeEEEEECCCHHHHHHHHHhcCCCEEEEeeC-----CeEEEEECCCCcceEEEccC-----------CCCceEEEEEE
Confidence            489999999999999999999999999874422     13467776643  2333211           12467899999


Q ss_pred             ECCHHHHH---HHHHhCCCeEEeec-----CCceEEEEEcCCCCeEEEEeec
Q 028083          170 IRDVSKLK---MILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       170 V~dv~~~~---~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      |+|++++.   ++|+++|+++...+     .+.+++||+||+||.|||++..
T Consensus        67 v~d~~~l~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~yf~DPdG~~iE~~~~~  118 (144)
T cd07239          67 MPSIDEVMRGIGRMIDKGIDILWGPGRHGPGDNTFAYFLDPGGFVIEYTSEL  118 (144)
T ss_pred             CCCHHHHHHHHHHHHHcCCceeeCCcccCCCCCEEEEEECCCCcEEEeccCc
Confidence            99877774   89999999986432     2256789999999999998753

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dio

>PRK06724 hypothetical protein; Provisional

Probab=99.70  E-value=4.2e-16  Score=117.84  Aligned_cols=108  Identities=22%  Similarity=0.295  Sum_probs=75.9

Q ss_pred             eeeeEeEEEEEcCCHHHHHHHHHHhc---CCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEE
Q 028083           90 GVVSVHHVGILCENLERSLEFYQNIL---GLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT  166 (214)
Q Consensus        90 ~i~~i~HV~l~V~D~~~a~~FY~~~L---Gf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hi  166 (214)
                      |+.+++||.|.|+|+++|++||+++|   |++....         .. +..|+..+.+......  .    ....+..|+
T Consensus         4 ~~~~i~Hv~l~V~Dle~s~~FY~~vlg~lg~~~~~~---------~~-~~~g~~~l~l~~~~~~--~----~~~~g~~h~   67 (128)
T PRK06724          4 LRAGIHHIEFWVANLEESISFYDMLFSIIGWRKLNE---------VA-YSTGESEIYFKEVDEE--I----VRTLGPRHI   67 (128)
T ss_pred             cCcccCEEEEEeCCHHHHHHHHHHHHhhCCcEEeee---------Ee-eeCCCeeEEEecCCcc--c----cCCCCceeE
Confidence            45689999999999999999999966   5554321         01 1223333433322111  0    113467899


Q ss_pred             EEEE---CCHHHHHHHHHhCCCeEEeec-------CCceEEEEEcCCCCeEEEEeec
Q 028083          167 CIAI---RDVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       167 af~V---~dv~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      ||.|   +|+++++++|+++|+++..++       .|.+.+||+|||||.|||...+
T Consensus        68 af~v~~~~dvd~~~~~l~~~G~~~~~~p~~~~~~~~g~~~~~f~DPdG~~iEl~~~~  124 (128)
T PRK06724         68 CYQAINRKVVDEVAEFLSSTKIKIIRGPMEMNHYSEGYYTIDFYDPNGFIIEVAYTP  124 (128)
T ss_pred             EEecCChHHHHHHHHHHHHCCCEEecCCcccCCCCCCEEEEEEECCCCCEEEEEeCC
Confidence            9998   589999999999999985332       2348899999999999998654

>cd08354 Glo_EDI_BRP_like_13 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.70  E-value=8.4e-16  Score=113.37  Aligned_cols=114  Identities=27%  Similarity=0.539  Sum_probs=83.5

Q ss_pred             EeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECC-eEEEEEecCCCCCCCC--CCCCCCcceEEEEEE
Q 028083           94 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA-EMIHLMELPNPDPLSG--RPEHGGRDRHTCIAI  170 (214)
Q Consensus        94 i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~-~~l~l~~~~~~~~~~~--~~~~g~g~~hiaf~V  170 (214)
                      +.||.|.|.|++++++||+++|||++... +. +   ..+++..++ ..+.++..........  ......+..|++|.+
T Consensus         1 ~~~~~l~v~d~~~s~~Fy~~~lG~~~~~~-~~-~---~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v   75 (122)
T cd08354           1 ILETALYVDDLEAAEAFYEDVLGLELMLK-ED-R---RLAFFWVGGRGMLLLFDPGATSTPGGEIPPHGGSGPGHFAFAI   75 (122)
T ss_pred             CeEEEEEeCCHHHHHHHHHhccCCEEeec-CC-C---ceEEEEcCCCcEEEEEecCCcccccCCCCCCCCCCccEEEEEc
Confidence            35899999999999999999999998864 21 1   235677765 4455554432211000  111235678999999


Q ss_pred             C--CHHHHHHHHHhCCCeEEeec---CCceEEEEEcCCCCeEEEEee
Q 028083          171 R--DVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       171 ~--dv~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      +  |++++++++.++|+++....   .+++.+|++|||||+|||+++
T Consensus        76 ~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  122 (122)
T cd08354          76 PAEELAEWEAHLEAKGVAIESEVQWPRGGRSLYFRDPDGNLLELATP  122 (122)
T ss_pred             CHHHHHHHHHHHHhcCCceeccccCCCCeeEEEEECCCCCEEEEecC
Confidence            5  89999999999999876543   467899999999999999863

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08349 BLMA_like Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

Probab=99.69  E-value=1.1e-15  Score=111.02  Aligned_cols=105  Identities=30%  Similarity=0.472  Sum_probs=80.5

Q ss_pred             EEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEEEECCHHHHH
Q 028083           98 GILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLK  177 (214)
Q Consensus        98 ~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V~dv~~~~  177 (214)
                      .|.|+|++++++||+++|||++....+  .  ...+++..++..+++.........     ...+..|++|.++|+++++
T Consensus         3 ~i~v~d~~~s~~FY~~~lg~~~~~~~~--~--~~~~~~~~~~~~~~l~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~   73 (112)
T cd08349           3 VLPVSDIERSLAFYRDVLGFEVDWEHP--E--PGYAFLSRGGAQLMLSEHDGDEPV-----PLGRGGSVYIEVEDVDALY   73 (112)
T ss_pred             EEEECCHHHHHHHHHhccCeEEEEEcC--C--CcEEEEEeCCEEEEEeccCCCCCC-----CCCCcEEEEEEeCCHHHHH
Confidence            689999999999999999999886543  1  123567777777777655433211     2334569999999999999


Q ss_pred             HHHHhCCCe-EEeec----CCceEEEEEcCCCCeEEEEe
Q 028083          178 MILDKAGIS-YTLSK----SGRPAIFTRDPDANALEFTQ  211 (214)
Q Consensus       178 ~~l~~~G~~-~~~~~----~g~~~~~~~DPdG~~iEl~~  211 (214)
                      +++++.|+. +..+.    .+.+.++++||+||.|||+|
T Consensus        74 ~~l~~~G~~~~~~~~~~~~~g~~~~~~~DP~G~~ie~~~  112 (112)
T cd08349          74 AELKAKGADLIVYPPEDQPWGMREFAVRDPDGNLLRFGE  112 (112)
T ss_pred             HHHHHcCCcceecCccCCCcccEEEEEECCCCCEEEecC
Confidence            999999998 43322    34688999999999999986

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the large

>cd07266 HPCD_N_class_II N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

Probab=99.69  E-value=6.3e-16  Score=114.36  Aligned_cols=108  Identities=22%  Similarity=0.283  Sum_probs=79.9

Q ss_pred             eeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEEC--CeEEEEEecCCCCCCCCCCCCCCcceEEE
Q 028083           90 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG--AEMIHLMELPNPDPLSGRPEHGGRDRHTC  167 (214)
Q Consensus        90 ~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g--~~~l~l~~~~~~~~~~~~~~~g~g~~hia  167 (214)
                      ++++++|+.|.|+|++++.+||+++|||++....+      ..+|+...  .....+.....         ...+..|++
T Consensus         1 ~~~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~---------~~~~~~hi~   65 (121)
T cd07266           1 NILRLGHVELRVTDLEKSREFYVDVLGLVETEEDD------DRIYLRGLEEFIHHSLVLTKA---------PVAGLGHIA   65 (121)
T ss_pred             CcceeeEEEEEcCCHHHHHHHHHhccCCEEeccCC------CeEEEEecCCCceEEEEEeeC---------CCCceeEEE
Confidence            35789999999999999999999999999876432      23455432  12222221111         123578999


Q ss_pred             EEEC---CHHHHHHHHHhCCCeEEee----c-CCceEEEEEcCCCCeEEEEee
Q 028083          168 IAIR---DVSKLKMILDKAGISYTLS----K-SGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       168 f~V~---dv~~~~~~l~~~G~~~~~~----~-~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      |.|.   |+++++++++++|+++...    . .+++.+|+.|||||+||++..
T Consensus        66 ~~v~~~~dv~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~~  118 (121)
T cd07266          66 FRVRSEEDLDKAEAFFQELGLPTEWVEAGEEPGQGRALRVEDPLGFPIEFYAE  118 (121)
T ss_pred             EECCCHHHHHHHHHHHHHcCCCcccccCCcCCCCccEEEEECCCCCEEEEEec
Confidence            9995   8999999999999998643    1 235789999999999999864

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a differ

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.68  E-value=2.1e-15  Score=113.85  Aligned_cols=110  Identities=14%  Similarity=0.160  Sum_probs=76.3

Q ss_pred             eEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCC-----------CCceEEEEEE----CCeEEEEEecCCCCCCCCCC
Q 028083           93 SVHHVGILCENLERSLEFYQNILGLEINEARPHDK-----------LPYRGAWLWV----GAEMIHLMELPNPDPLSGRP  157 (214)
Q Consensus        93 ~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~-----------~~~~~~~l~~----g~~~l~l~~~~~~~~~~~~~  157 (214)
                      ++.|++|.|.|+++|++||+++|||++..+...+.           .....+++..    ++..+++.......+    .
T Consensus         2 ~~~Hv~irV~DlerSi~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~lEL~~n~~~~~----~   77 (127)
T cd08358           2 RALHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPEDDHFVVELTYNYGIGD----Y   77 (127)
T ss_pred             ceEEEEEEeCCHHHHHHHHHHhcCCEEEeeecCccccccccccCCCCcEEEEEEecCCCCCccEEEeEecCCCCC----C
Confidence            68999999999999999999999999865432222           1111233433    233566665332211    1


Q ss_pred             CCCCcceEEEEEECCHHHHHHHHHhCCCeEEeecCCceEEEEEcCCCCeEEEEe
Q 028083          158 EHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQ  211 (214)
Q Consensus       158 ~~g~g~~hiaf~V~dv~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdG~~iEl~~  211 (214)
                      ..|.+  |++|.|++. ++.++|+++|+++...+.+  .++++||||+.|||..
T Consensus        78 ~~g~~--~~hlav~~~-d~~~~l~~~Gv~~~~~~~~--~~fi~DPDG~~ie~~~  126 (127)
T cd08358          78 ELGND--FLGITIHSK-QAVSNAKKHNWPVTEVEDG--VYEVKAPGGYKFYLID  126 (127)
T ss_pred             CCCCC--EEEEEEECH-HHHHHHHHCCCceecCCCC--EEEEECCCCCEEEEec
Confidence            12333  677777777 5669999999999876554  7899999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.68  E-value=1.3e-15  Score=129.72  Aligned_cols=115  Identities=27%  Similarity=0.451  Sum_probs=81.5

Q ss_pred             ceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEE
Q 028083           89 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  168 (214)
Q Consensus        89 ~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf  168 (214)
                      +.+++++||+|.|.|++++.+||+++|||++..............|+..++.. +.+....        ..+++++|+||
T Consensus       132 ~~~~~i~Hv~l~v~dl~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--------~~~~~~~Hiaf  202 (294)
T TIGR02295       132 VSPVRLDHFNVFVPDVQRALRFYKEELGFRVTEYTEDDEGNLAAAWLHRKGGV-HDIALTN--------GNGPRLHHIAY  202 (294)
T ss_pred             ccceeeeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCcEEEEEEecCCCc-CceEeec--------CCCCceeeEEE
Confidence            45689999999999999999999999999987553222223234565543221 1111111        12367899999


Q ss_pred             EECC---HHHHHHHHHhCCCe--EEee--cC---CceEEEEEcCCCCeEEEEee
Q 028083          169 AIRD---VSKLKMILDKAGIS--YTLS--KS---GRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       169 ~V~d---v~~~~~~l~~~G~~--~~~~--~~---g~~~~~~~DPdG~~iEl~~~  212 (214)
                      +|+|   +++++++|+++|++  +...  .+   +.+++|++||+||+|||++.
T Consensus       203 ~v~d~~~v~~~~~~l~~~G~~~~~~~~p~~~~~~~~~~~y~~DP~G~~iEl~~~  256 (294)
T TIGR02295       203 WVHDPLNIIKACDILASAGLSDSIERGPGRHGVSNAFFLYLRDPDGHRIELYTG  256 (294)
T ss_pred             EcCCHHHHHHHHHHHHhCCCCcccccCCccCCCCcceEEEEECCCCCEEEEEec
Confidence            9997   55678999999997  4432  22   25689999999999999864

The enzyme from Bacillus brevis contains manganese.

>cd08357 Glo_EDI_BRP_like_18 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.68  E-value=1.1e-15  Score=113.29  Aligned_cols=111  Identities=22%  Similarity=0.299  Sum_probs=74.9

Q ss_pred             EEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCC--CCCC-CCCCCCcceEEEE--EE
Q 028083           96 HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPD--PLSG-RPEHGGRDRHTCI--AI  170 (214)
Q Consensus        96 HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~--~~~~-~~~~g~g~~hiaf--~V  170 (214)
                      ||.|.|+|+++|++||+++|||++.....      ..+.+..++..+.+.......  .... ......+..|+++  .+
T Consensus         2 Hi~l~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~   75 (125)
T cd08357           2 HLAIPVRDLEAARAFYGDVLGCKEGRSSE------TWVDFDFFGHQLVAHLSPNFNADASDNAVDGHPVPVPHFGLILSE   75 (125)
T ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEeeccC------CcccccccCcEEEEEeccCCCcccccCCCCCCccCCceEEEEEeH
Confidence            99999999999999999999999865321      112244444444443222111  1110 1112234567765  55


Q ss_pred             CCHHHHHHHHHhCCCeEEeec--------CCceEEEEEcCCCCeEEEEee
Q 028083          171 RDVSKLKMILDKAGISYTLSK--------SGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       171 ~dv~~~~~~l~~~G~~~~~~~--------~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      +|+++++++|+++|+++..++        .+.+.+||+|||||+|||.++
T Consensus        76 ~dv~~~~~~l~~~g~~~~~~p~~~~~~~~~~~~~~~~~DPdG~~iE~~~~  125 (125)
T cd08357          76 EEFDALAERLEAAGVEFLIEPYTRFEGQPGEQETFFLKDPSGNALEFKAF  125 (125)
T ss_pred             HHHHHHHHHHHHCCCcEecCcceeccCCcCceeEEEEECCCCCEEEEeeC
Confidence            799999999999999986322        235889999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=99.68  E-value=1.1e-15  Score=108.97  Aligned_cols=108  Identities=30%  Similarity=0.442  Sum_probs=86.4

Q ss_pred             EEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEEEECCHHH
Q 028083           96 HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSK  175 (214)
Q Consensus        96 HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V~dv~~  175 (214)
                      |+.|.|.|++++++||+++||+++......  ......++..++..+++....+....    ..+.+..|++|.|+|+++
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~--~~~~~~~~~~~~~~i~l~~~~~~~~~----~~~~~~~~~~~~v~~~~~   74 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGN--GGAEFAVLGLGGTRLELFEGDEPAPA----PSGGGGVHLAFEVDDVDA   74 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeecc--CCEEEEEEecCCceEEEecCCCCCCc----ccCCCeeEEEEECCCHHH
Confidence            899999999999999999999998876432  12244556667778888876654321    345677899999999999


Q ss_pred             HHHHHHhCCCeEEeec----CCceEEEEEcCCCCeEEE
Q 028083          176 LKMILDKAGISYTLSK----SGRPAIFTRDPDANALEF  209 (214)
Q Consensus       176 ~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl  209 (214)
                      +++++.++|+.+..+.    .+...+++.||+|+.|||
T Consensus        75 ~~~~l~~~g~~~~~~~~~~~~~~~~~~~~Dp~G~~~~~  112 (112)
T cd06587          75 AYERLKAAGVEVLGEPREEPWGGRVAYFRDPDGNLIEL  112 (112)
T ss_pred             HHHHHHHcCCcccCCCcCCCCCcEEEEEECCCCcEEeC
Confidence            9999999999886543    458999999999999986

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>cd07258 PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.68  E-value=1e-15  Score=117.56  Aligned_cols=105  Identities=18%  Similarity=0.245  Sum_probs=78.5

Q ss_pred             eEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECC-eEEEEEecCCCCCCCCCCCCCCcceEEEEEECC-
Q 028083           95 HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA-EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD-  172 (214)
Q Consensus        95 ~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~-~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V~d-  172 (214)
                      .||.|.|+|++++.+||+++|||++.....     ...+|++.++ ...+.+... +       ...++++|++|.|+| 
T Consensus         1 ~Hv~l~V~Dle~s~~Fy~~vLG~~~~~~~~-----~~~~~l~~~~~~~~h~~~~~-~-------~~~~gl~Hiaf~v~~~   67 (141)
T cd07258           1 GHVVIGSENFEASRDSLVEDFGFRVSDLIE-----DRIVFMRCHPNPFHHTFAVG-P-------ASSSHFHHVNFMVTDI   67 (141)
T ss_pred             CcEEEecCCHHHHHHHHHhcCCCEeeeeeC-----CEEEEEEcCCCCCcceeeec-c-------CCCCceEEEEEECCCH
Confidence            499999999999999999999999876532     1457777543 222322211 1       124689999999985 


Q ss_pred             --HHHHHHHHHhCCCeEEeec-----CCceEEEEEcCCCCeEEEEee
Q 028083          173 --VSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       173 --v~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~iEl~~~  212 (214)
                        +++++++|+++|+++..++     .+.+.+||+||||+.|||+..
T Consensus        68 ~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~  114 (141)
T cd07258          68 DDIGKALYRIKAHDVKVVFGPGRHPPSDSIFFYFLDPDGITVEYSFG  114 (141)
T ss_pred             HHHHHHHHHHHHCCCcEEeCCceECCCCCEEEEEECCCCCEEEEEeC
Confidence              5678999999999986432     346889999999999999753

This subfamily contains the C-terminal, catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as for other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=99.68  E-value=1.2e-15  Score=112.96  Aligned_cols=113  Identities=20%  Similarity=0.300  Sum_probs=77.1

Q ss_pred             EeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEEC-CeEEEEEecCCCCCC-CCCCCCCCcceEEEEEEC
Q 028083           94 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPL-SGRPEHGGRDRHTCIAIR  171 (214)
Q Consensus        94 i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g-~~~l~l~~~~~~~~~-~~~~~~g~g~~hiaf~V~  171 (214)
                      ++||.|.|.|+++|++||+. |||++......    ...+++..+ +..+.+......... ...+..+++..|++|.+.
T Consensus         1 ~~~i~l~V~D~~~a~~FY~~-LGf~~~~~~~~----~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~   75 (122)
T cd07235           1 LDAVGIVVADMAKSLDFYRR-LGFDFPEEADD----EPHVEAVLPGGVRLAWDTVESIRSFTPGWTPTGGHRIALAFLCE   75 (122)
T ss_pred             CceEEEEeccHHHHHHHHHH-hCceecCCcCC----CCcEEEEeCCCEEEEEEcccceeeecCCCCCCCCCcEEEEEEcC
Confidence            58999999999999999975 99998643221    122445554 555554332211100 011112344578999875


Q ss_pred             ---CHHHHHHHHHhCCCeEEeec----CCceEEEEEcCCCCeEEEEe
Q 028083          172 ---DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQ  211 (214)
Q Consensus       172 ---dv~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~~  211 (214)
                         |+++++++|+++|+++..++    .|.+.++|+|||||.|||+.
T Consensus        76 ~~~dvd~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~  122 (122)
T cd07235          76 TPAEVDALYAELVGAGYPGHKEPWDAPWGQRYAIVKDPDGNLVDLFA  122 (122)
T ss_pred             CHHHHHHHHHHHHHCCCCcCCCCccCCCCCEEEEEECCCCCEEEEeC
Confidence               89999999999999876432    45688999999999999973

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>cd07254 Glo_EDI_BRP_like_20 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.67  E-value=3.3e-15  Score=110.41  Aligned_cols=107  Identities=23%  Similarity=0.400  Sum_probs=77.2

Q ss_pred             eEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEEEECC--
Q 028083           95 HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD--  172 (214)
Q Consensus        95 ~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V~d--  172 (214)
                      -|+.|.|+|++++.+||+++||++.....+  +   ...|. .++..+.+.....+...      .++..|++|.|+|  
T Consensus         3 ~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~--~---~~~~~-~~~~~~~~~~~~~~~~~------~~~~~h~~f~v~~~~   70 (120)
T cd07254           3 FHVALNVDDLEASIAFYSKLFGVEPTKVRD--D---YAKFL-LEDPRLNFVLNERPGAP------GGGLNHLGVQVDSAE   70 (120)
T ss_pred             EEEEEEeCCHHHHHHHHHHHhCCeEecccC--C---eeEEE-ecCCceEEEEecCCCCC------CCCeeEEEEEeCCHH
Confidence            499999999999999999999998865432  1   23333 23333333322222111      1467899999987  


Q ss_pred             -HHHHHHHHHhCCCeEEeecC------CceEEEEEcCCCCeEEEEeec
Q 028083          173 -VSKLKMILDKAGISYTLSKS------GRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       173 -v~~~~~~l~~~G~~~~~~~~------g~~~~~~~DPdG~~iEl~~~~  213 (214)
                       ++++++++.++|+++...+.      +.+.+|++|||||+|||+...
T Consensus        71 dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  118 (120)
T cd07254          71 EVAEAKARAEAAGLPTFKEEDTTCCYAVQDKVWVTDPDGNAWEVFVTL  118 (120)
T ss_pred             HHHHHHHHHHHcCCeEEccCCcccccCCcceEEEECCCCCEEEEEEee
Confidence             78899999999999865421      256799999999999999754

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins

Probab=99.67  E-value=2e-15  Score=111.92  Aligned_cols=104  Identities=25%  Similarity=0.371  Sum_probs=78.8

Q ss_pred             EEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEEEECCHHH
Q 028083           96 HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSK  175 (214)
Q Consensus        96 HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V~dv~~  175 (214)
                      ...|.|.|+++|++||++ |||++....+.     ..+++..++..+++.......+       .....|++|.|+|+++
T Consensus         5 ~~~l~v~Dl~~s~~FY~~-lG~~~~~~~~~-----~~~~~~~~~~~l~l~~~~~~~~-------~~~~~~~~~~v~dvd~   71 (120)
T cd08350           5 IPNLPSRDLDATEAFYAR-LGFSVGYRQAA-----GYMILRRGDLELHFFAHPDLDP-------ATSPFGCCLRLPDVAA   71 (120)
T ss_pred             cceeEcCCHHHHHHHHHH-cCCEEEecCCC-----CEEEEEcCCEEEEEEecCcCCC-------CCCcceEEEEeCCHHH
Confidence            357899999999999999 99999865432     2345677777778775432111       1122479999999999


Q ss_pred             HHHHHHhCCCeEE--------ee---cCCceEEEEEcCCCCeEEEEee
Q 028083          176 LKMILDKAGISYT--------LS---KSGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       176 ~~~~l~~~G~~~~--------~~---~~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      ++++|+++|+++.        ..   ..|.+.++|+|||||+|||.|.
T Consensus        72 ~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdG~~ie~~~~  119 (120)
T cd08350          72 LHAEFRAAGLPETGSGIPRITPPEDQPWGMREFALVDPDGNLLRFGQP  119 (120)
T ss_pred             HHHHHHHhCccccccCCCcccCCcCCCCceeEEEEECCCCCEEEeecC
Confidence            9999999999742        22   2567899999999999999884

BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.67  E-value=4.8e-15  Score=126.08  Aligned_cols=113  Identities=15%  Similarity=0.265  Sum_probs=81.1

Q ss_pred             eeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecC--CC-CCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEE
Q 028083           91 VVSVHHVGILCENLERSLEFYQNILGLEINEARP--HD-KLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTC  167 (214)
Q Consensus        91 i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~--~~-~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hia  167 (214)
                      +.+++||+|.|+|++++.+||+++|||++.....  .+ +.....+|+..++....+.....+        ..++++|+|
T Consensus       140 ~~~l~Hv~l~v~Dle~s~~FY~~~LGf~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~l~~~~--------~~~~~~Hia  211 (286)
T TIGR03213       140 DQGLGHIVLRVPDVDAALAFYTEVLGFQLSDVIDLPAGPGVTVRPYFLHCNERHHSLAFAAGP--------SEKRLNHLM  211 (286)
T ss_pred             CccccEEEEEcCCHHHHHHHHHHccCCeEEEeEcccCCCCCcceEEEEEECCCcceEEEecCC--------CCCceEEEE
Confidence            4799999999999999999999999999875421  11 111245677775433222211111        235789999


Q ss_pred             EEECCHHH---HHHHHHhCCCeEEee-c---CCceEEEEEcCCCCeEEEEe
Q 028083          168 IAIRDVSK---LKMILDKAGISYTLS-K---SGRPAIFTRDPDANALEFTQ  211 (214)
Q Consensus       168 f~V~dv~~---~~~~l~~~G~~~~~~-~---~g~~~~~~~DPdG~~iEl~~  211 (214)
                      |+|+|+++   ++++|+++|+....+ +   .+..++|++||||++|||..
T Consensus       212 f~v~d~~~v~~~~~~l~~~G~~~~~~~r~~~~~~~~~y~~DP~G~~iE~~~  262 (286)
T TIGR03213       212 LEVDTLDDVGLALDRVDADGIVASTLGRHTNDHMVSFYVATPSGWLVEYGW  262 (286)
T ss_pred             EEcCCHHHHHHHHHHHHHCCCEEecCCcCCCCCeEEEEEECCCCcEEEeec
Confidence            99997666   899999999943222 2   24678999999999999975

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.66  E-value=2.3e-15  Score=112.10  Aligned_cols=113  Identities=17%  Similarity=0.138  Sum_probs=77.4

Q ss_pred             EeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEEC-CeEEEEEecCCCCCCCC--C-CCCCCcceEEEEE
Q 028083           94 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPLSG--R-PEHGGRDRHTCIA  169 (214)
Q Consensus        94 i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g-~~~l~l~~~~~~~~~~~--~-~~~g~g~~hiaf~  169 (214)
                      +.+|.|.|.|+++|++||++ |||+.....+...    ..++..+ +..+.+...........  . ...+.+..|++|.
T Consensus         1 ~~~v~l~V~Dl~~s~~FY~~-lGf~~~~~~~~~~----~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~l~f~   75 (124)
T cd09012           1 MIFINLPVKDLEKSTAFYTA-LGFEFNPQFSDEK----AACMVISDNIFVMLLTEDFFQTFTPKPIADTKKSTEVLISLS   75 (124)
T ss_pred             CEEEEeecCCHHHHHHHHHH-CCCEEccccCCCC----eEEEEECCceEEEEEcHHHHhhccCCCcccCCCCCeEEEEEe
Confidence            36899999999999999987 9999864322111    2344444 45666654321100000  0 0123345699999


Q ss_pred             EC---CHHHHHHHHHhCCCeEEeec---CCceEEEEEcCCCCeEEEEe
Q 028083          170 IR---DVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQ  211 (214)
Q Consensus       170 V~---dv~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdG~~iEl~~  211 (214)
                      |+   |+++++++++++|+++..++   .+.+.+||+|||||+|||+.
T Consensus        76 v~~~~~vd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~DPdG~~ie~~~  123 (124)
T cd09012          76 ADSREEVDELVEKALAAGGKEFREPQDHGFMYGRSFADLDGHLWEVLW  123 (124)
T ss_pred             CCCHHHHHHHHHHHHHCCCcccCCcccCCceEEEEEECCCCCEEEEEE
Confidence            98   68899999999999986443   34568899999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=99.65  E-value=5.6e-15  Score=106.77  Aligned_cols=100  Identities=27%  Similarity=0.509  Sum_probs=72.1

Q ss_pred             EEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCe----EEEEEecCCCCCCCCCCCCCCcceEEEEEECCHH
Q 028083           99 ILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE----MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVS  174 (214)
Q Consensus        99 l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~----~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V~dv~  174 (214)
                      |.|+|++++++||+++|||++....+      ..+.+..+..    ...+.......      ....+..|++|.|+|++
T Consensus         1 l~v~d~~~a~~FY~~~lg~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~v~dv~   68 (108)
T PF12681_consen    1 LPVSDLEAAAAFYEDVLGFEVVFDDP------DYVDFSLGFRFHDGVIEFLQFPDPP------GPPGGGFHLCFEVEDVD   68 (108)
T ss_dssp             EEESSHHHHHHHHHHTTTSEEEEEET------SEEEEEETEEEEEEEEEEEEEESSS------SSSSSEEEEEEEESHHH
T ss_pred             CccCCHHHHHHHHHHhcCCEEEEeCC------CeEEEEeccchhhhhHHHccCCccc------cCCCceeEEEEEEcCHH
Confidence            68999999999999999999998433      1233444321    22333332111      12346689999999999


Q ss_pred             HHHHHHHhCCCeEEee----cCCceEEEEEcCCCCeEEEE
Q 028083          175 KLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFT  210 (214)
Q Consensus       175 ~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~iEl~  210 (214)
                      +++++++++|+++..+    ..|.+.++++|||||+|||+
T Consensus        69 ~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~ie~~  108 (108)
T PF12681_consen   69 ALYERLKELGAEIVTEPRDDPWGQRSFYFIDPDGNRIEFC  108 (108)
T ss_dssp             HHHHHHHHTTSEEEEEEEEETTSEEEEEEE-TTS-EEEEE
T ss_pred             HHHHHHHHCCCeEeeCCEEcCCCeEEEEEECCCCCEEEeC
Confidence            9999999999997533    24679999999999999996

...

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.65  E-value=4.3e-15  Score=110.19  Aligned_cols=108  Identities=23%  Similarity=0.308  Sum_probs=76.5

Q ss_pred             EeEEEEEcCCHHHHHHHHHHh---cCCEEeeecCCCCCCceEEEEEEC--CeEEEEEecCCCCCCCCCCCCCCcceEEEE
Q 028083           94 VHHVGILCENLERSLEFYQNI---LGLEINEARPHDKLPYRGAWLWVG--AEMIHLMELPNPDPLSGRPEHGGRDRHTCI  168 (214)
Q Consensus        94 i~HV~l~V~D~~~a~~FY~~~---LGf~~~~~~~~~~~~~~~~~l~~g--~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf  168 (214)
                      ++||.|.|+|+++|++||+++   |||++.....  +   ..+++..+  +..+.+.......+     ....+..|++|
T Consensus         1 l~hv~l~v~d~~~s~~FY~~~f~~lg~~~~~~~~--~---~~~~~~~~~~~~~~~l~~~~~~~~-----~~~~~~~hi~f   70 (123)
T cd07262           1 IDHVTLGVNDLERARAFYDAVLAPLGIKRVMEDG--P---GAVGYGKGGGGPDFWVTKPFDGEP-----ATAGNGTHVAF   70 (123)
T ss_pred             CcEEEEecCcHHHHHHHHHHHHhhcCceEEeecC--C---ceeEeccCCCCceEEEeccccCCC-----CCCCCceEEEE
Confidence            589999999999999999998   6998875431  1   12333333  45666654332111     11233479999


Q ss_pred             EECC---HHHHHHHHHhCCCeEEeec-------CCceEEEEEcCCCCeEEEEe
Q 028083          169 AIRD---VSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQ  211 (214)
Q Consensus       169 ~V~d---v~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DPdG~~iEl~~  211 (214)
                      .|+|   +++++++++++|+.+...+       .+.+.+||+|||||.|||+.
T Consensus        71 ~v~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ie~~~  123 (123)
T cd07262          71 AAPSREAVDAFHAAALAAGGTDEGAPGLRPHYGPGYYAAYVRDPDGNKIEAVC  123 (123)
T ss_pred             ECCCHHHHHHHHHHHHHcCCccCCCCCCCCCCCCCeEEEEEECCCCCEEEEeC
Confidence            9996   7889999999999876432       13457999999999999973

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.65  E-value=3.3e-15  Score=110.09  Aligned_cols=100  Identities=18%  Similarity=0.213  Sum_probs=76.1

Q ss_pred             EEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEEEECCHHHH
Q 028083           97 VGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKL  176 (214)
Q Consensus        97 V~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V~dv~~~  176 (214)
                      ..|.|.|+++|.+||++ |||++....+      ..+++..|+..+.+........        ....+++|.|+|++++
T Consensus         5 ~~l~v~Dl~~s~~FY~~-LGf~~~~~~~------~~~~l~~~~~~l~l~~~~~~~~--------~~~~~~~~~v~did~~   69 (113)
T cd08356           5 PFIPAKDFAESKQFYQA-LGFELEWEND------NLAYFRLGNCAFYLQDYYVKDW--------AENSMLHLEVDDLEAY   69 (113)
T ss_pred             eccccccHHHHHHHHHH-hCCeeEecCC------CEEEEEcCCEEEEeecCCCccc--------ccCCEEEEEECCHHHH
Confidence            35789999999999988 9999986532      3467888877666644322211        1235799999999999


Q ss_pred             HHHHHhCCCeEE---------eecCCceEEEEEcCCCCeEEEEe
Q 028083          177 KMILDKAGISYT---------LSKSGRPAIFTRDPDANALEFTQ  211 (214)
Q Consensus       177 ~~~l~~~G~~~~---------~~~~g~~~~~~~DPdG~~iEl~~  211 (214)
                      +++|+++|+++.         ....|.+.++|+|||||+|+|.|
T Consensus        70 ~~~l~~~G~~~~~~~~~~~~~~~~~g~r~f~~~DPdGn~~~~~~  113 (113)
T cd08356          70 YEHIKALGLPKKFPGVKLPPITQPWWGREFFLHDPSGVLWHIGQ  113 (113)
T ss_pred             HHHHHHcCCcccccceecCccccCCCcEEEEEECCCccEEEeeC
Confidence            999999998742         11357899999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07261 Glo_EDI_BRP_like_11 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.64  E-value=7.3e-15  Score=107.51  Aligned_cols=106  Identities=22%  Similarity=0.262  Sum_probs=77.9

Q ss_pred             EEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEE-CCeEEEEEecCCCCCCCCCCCCCCcceEEEEEECC---
Q 028083           97 VGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD---  172 (214)
Q Consensus        97 V~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~-g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V~d---  172 (214)
                      +.|.|.|+++|++||+++||+++....+      ..+++.. ++..+.++........   .....+..|++|.|++   
T Consensus         2 ~~l~v~d~~~a~~FY~~~lg~~~~~~~~------~~~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~v~~~~~   72 (114)
T cd07261           2 VLLYVEDPAASAEFYSELLGREPVELSP------TFALFVLGSGVKLGLWSRHTVEPA---SDATGGGSELAFMVDDGAA   72 (114)
T ss_pred             EEEEECCHHHHHHHHHHHcCCCccCCCC------ceEEEEeCCCcEEEEeeccccCCC---CCCCCCceEEEEEcCCHHH
Confidence            6789999999999999999999875422      1233444 5566777654432211   1123456899999985   


Q ss_pred             HHHHHHHHHhCCCeEEeec---CCceEEEEEcCCCCeEEEEe
Q 028083          173 VSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQ  211 (214)
Q Consensus       173 v~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdG~~iEl~~  211 (214)
                      ++++++++.++|+++..++   ..++.++|+|||||+|||++
T Consensus        73 ~~~~~~~~~~~g~~v~~~~~~~~~g~~~~~~DPdGn~ie~~~  114 (114)
T cd07261          73 VDALYAEWQAKGVKIIQEPTEMDFGYTFVALDPDGHRLRVFA  114 (114)
T ss_pred             HHHHHHHHHHCCCeEecCccccCCccEEEEECCCCCEEEeeC
Confidence            8899999999999987543   23578999999999999984

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.64  E-value=9.5e-15  Score=106.69  Aligned_cols=101  Identities=18%  Similarity=0.179  Sum_probs=74.6

Q ss_pred             EEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEEC---CeEEEEEecCCCCCCCCCCCCCCcceEEEEEECCH
Q 028083           97 VGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG---AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDV  173 (214)
Q Consensus        97 V~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g---~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V~dv  173 (214)
                      ..|.|.|++++.+||+++|||++....   +   ...++..+   ...+.+......         +....|++|.|+|+
T Consensus         4 ~~l~v~Dl~~s~~FY~~~lG~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~i~~~v~d~   68 (112)
T cd07238           4 PNLPVADPEAAAAFYADVLGLDVVMDH---G---WIATFASPQNMTVQVSLATEGGT---------ATVVPDLSIEVDDV   68 (112)
T ss_pred             ceEecCCHHHHHHHHHHhcCceEEEcC---C---ceEEEeecCCCCcEEEEecCCCC---------CCCCCEEEEEeCCH
Confidence            468899999999999999999987431   1   23444442   234444332111         12346999999999


Q ss_pred             HHHHHHHHhCCCeEEeec----CCceEEEEEcCCCCeEEEEee
Q 028083          174 SKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       174 ~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      ++++++|+++|+++...+    .|.+.+|+.|||||+|||++.
T Consensus        69 ~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~Gn~i~~~~~  111 (112)
T cd07238          69 DAALARAVAAGFAIVYGPTDEPWGVRRFFVRDPFGKLVNILTH  111 (112)
T ss_pred             HHHHHHHHhcCCeEecCCccCCCceEEEEEECCCCCEEEEEEc
Confidence            999999999999976432    356789999999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=99.63  E-value=1.2e-14  Score=106.49  Aligned_cols=100  Identities=25%  Similarity=0.377  Sum_probs=70.9

Q ss_pred             eEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEE-CCe--EEEEEecCCCCCCCCCCCCCCcceEE--E
Q 028083           93 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAE--MIHLMELPNPDPLSGRPEHGGRDRHT--C  167 (214)
Q Consensus        93 ~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~-g~~--~l~l~~~~~~~~~~~~~~~g~g~~hi--a  167 (214)
                      +|+||.|.|.|++++.+||+ .|||++....+      . .++.. ++.  .+.+...  .         ..+..|+  +
T Consensus         2 ~i~hv~l~v~d~~~s~~FY~-~lG~~~~~~~~------~-~~~~~~~~~~~~~~~~~~--~---------~~~~~~~~~~   62 (112)
T cd08344           2 SIDHFALEVPDLEVARRFYE-AFGLDVREEGD------G-LELRTAGNDHRWARLLEG--A---------RKRLAYLSFG   62 (112)
T ss_pred             ceeEEEEecCCHHHHHHHHH-HhCCcEEeecC------c-eEEEecCCCceEEEeecC--C---------CCceeeEEEE
Confidence            68999999999999999998 69999875421      1 33333 322  2222211  1         1234454  4


Q ss_pred             EEECCHHHHHHHHHhCCCeEEeec--CCceEEEEEcCCCCeEEEEe
Q 028083          168 IAIRDVSKLKMILDKAGISYTLSK--SGRPAIFTRDPDANALEFTQ  211 (214)
Q Consensus       168 f~V~dv~~~~~~l~~~G~~~~~~~--~g~~~~~~~DPdG~~iEl~~  211 (214)
                      +.++|+++++++++++|+++...+  .+...+||.|||||+|||+.
T Consensus        63 ~~~~d~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~DP~Gn~iel~~  108 (112)
T cd08344          63 IFEDDFAAFARHLEAAGVALAAAPPGADPDGVWFRDPDGNLLQVKV  108 (112)
T ss_pred             eEhhhHHHHHHHHHHcCCceecCCCcCCCCEEEEECCCCCEEEEec
Confidence            455799999999999999986442  34567999999999999985

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=99.62  E-value=2.9e-15  Score=109.73  Aligned_cols=93  Identities=26%  Similarity=0.397  Sum_probs=77.3

Q ss_pred             eEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECC--eEEEEEecCCCCCCCCCCCCCCcceEEEEEECC
Q 028083           95 HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD  172 (214)
Q Consensus        95 ~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~--~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V~d  172 (214)
                      |||+|.|+|+++|++||+++||++.......+....+.+|+..++  ..++|+++..+++..  .++++|++||||+|+|
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~~~~~iELi~p~~~~~~~--~~~~~gi~Hia~~v~D   78 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGDGPVQIELIQPLDGDSPL--DRGGGGIHHIAFEVDD   78 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETTETEEEEEEEESSTTCHH--HHTSSEEEEEEEEESH
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCCCcEEEEEEEeCCCCccc--ccCCCCEEEEEEEeCC
Confidence            799999999999999999999999876555455666778888876  689999988765322  1278899999999999


Q ss_pred             HHHHHHHHHhCCCeEEe
Q 028083          173 VSKLKMILDKAGISYTL  189 (214)
Q Consensus       173 v~~~~~~l~~~G~~~~~  189 (214)
                      ++++.++|+++|+++..
T Consensus        79 ~d~~~~~l~~~G~~~~~   95 (109)
T PF13669_consen   79 LDAAIARLEAQGFRVLD   95 (109)
T ss_dssp             HHHHHHHHHHTTECEEE
T ss_pred             HHHHHHHHHHCCCEEcc
Confidence            99999999999999753

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.60  E-value=1.8e-14  Score=122.59  Aligned_cols=107  Identities=21%  Similarity=0.280  Sum_probs=80.3

Q ss_pred             eeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEEEE
Q 028083           91 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  170 (214)
Q Consensus        91 i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V  170 (214)
                      |.+++||.|.|+|+++|++||+++|||+......  .   ...|+..++....+.....+.         .++.|++|.|
T Consensus         1 ~~~i~~v~l~V~Dl~~s~~FY~~~LGl~~~~~~~--~---~~~~~~~~~~~~~~~l~~~~~---------~~~~~~~f~V   66 (286)
T TIGR03213         1 VRGLGYLGIGVSDVDAWREFATEVLGMMVASEGE--N---DALYLRLDSRAHRIAVHPGES---------DDLAYAGWEV   66 (286)
T ss_pred             CceeeEEEEEeCCHHHHHHHHHhccCcccccCCC--C---ceEEEEcCCCceEEEEEECCc---------CCeeeEeeee
Confidence            4689999999999999999999999998764322  1   134667654323332222221         2467999999


Q ss_pred             CC---HHHHHHHHHhCCCeEEeec-------CCceEEEEEcCCCCeEEEEe
Q 028083          171 RD---VSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQ  211 (214)
Q Consensus       171 ~d---v~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DPdG~~iEl~~  211 (214)
                      ++   ++++.++|+++|+++...+       .+...++|+|||||.|||+.
T Consensus        67 ~~~~~l~~~~~~L~~~Gv~~~~~~~~~~~~~~~~~~~~f~DPdGn~lEl~~  117 (286)
T TIGR03213        67 ADEAGLDQVKEKLEKAGVAVTVASAAEARERGVLGLIKFTDPGGNPLEIYY  117 (286)
T ss_pred             CCHHHHHHHHHHHHHcCCceEECCHHHhhhccceEEEEEECCCCCEEEEEE
Confidence            97   8899999999999986532       23678999999999999986

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.59  E-value=3.1e-14  Score=121.26  Aligned_cols=108  Identities=20%  Similarity=0.257  Sum_probs=80.9

Q ss_pred             eeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEEC-C-eEEEEEecCCCCCCCCCCCCCCcceEEE
Q 028083           90 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-A-EMIHLMELPNPDPLSGRPEHGGRDRHTC  167 (214)
Q Consensus        90 ~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g-~-~~l~l~~~~~~~~~~~~~~~g~g~~hia  167 (214)
                      +|.+++||.|.|+|++++++||+++|||++....+      ..+|+... . ....+.....         ...++.|++
T Consensus         1 ~i~~i~hv~l~v~Dl~~s~~FY~~vLGl~~~~~~~------~~~~~~~~~~~~~~~l~l~~~---------~~~~~~hia   65 (294)
T TIGR02295         1 NILRTGHVELRVTDLDKSREFYVDLLGFRETESDK------EYIYLRGIEEFQHHSLVLTKA---------PSAALSYIG   65 (294)
T ss_pred             CCceeeEEEEEeCCHHHHHHHHHHccCCEEEEecC------CeEEEeccCcCCceEEEeeeC---------CCcCccEEE
Confidence            36799999999999999999999999999876532      13455432 1 1112211111         123578999


Q ss_pred             EEEC---CHHHHHHHHHhCCCeEEeec--CCceEEEEEcCCCCeEEEEee
Q 028083          168 IAIR---DVSKLKMILDKAGISYTLSK--SGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       168 f~V~---dv~~~~~~l~~~G~~~~~~~--~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      |.|+   |+++++++|+++|+++....  .+.+.+||+|||||.|||++.
T Consensus        66 f~v~~~~dl~~~~~~l~~~Gv~v~~~~~~~~~~~~~~~DPdG~~iEl~~~  115 (294)
T TIGR02295        66 FRVSKEEDLDKAADFFQKLGHPVRLVRDGGQPEALRVEDPFGYPIEFYFE  115 (294)
T ss_pred             EEeCCHHHHHHHHHHHHhcCCcEEeecCCCCceEEEEECCCCCEEEEEEc
Confidence            9997   79999999999999987543  346899999999999999863

The enzyme from Bacillus brevis contains manganese.

>cd07251 Glo_EDI_BRP_like_10 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.59  E-value=3.4e-14  Score=104.40  Aligned_cols=110  Identities=19%  Similarity=0.255  Sum_probs=77.9

Q ss_pred             EEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCC--CCCCcceEEEEEE---C
Q 028083           97 VGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRP--EHGGRDRHTCIAI---R  171 (214)
Q Consensus        97 V~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~--~~g~g~~hiaf~V---~  171 (214)
                      |.|.|.|++++.+||+++|||++... +.    ....++..++..+.+............+  ..+.+..|++|.+   +
T Consensus         2 i~l~v~d~~~a~~FY~~~lg~~~~~~-~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (121)
T cd07251           2 ITLGVADLARSRAFYEALLGWKPSAD-SN----DGVAFFQLGGLVLALFPREELAKDAGVPVPPPGFSGITLAHNVRSEE   76 (121)
T ss_pred             eeEeeCCHHHHHHHHHHhcCceeccc-CC----CceEEEEcCCeEEEEecchhhhhhcCCCCCCCCccceEEEEEcCCHH
Confidence            78999999999999999999998755 11    1345677777777776543211111111  1222334566665   5


Q ss_pred             CHHHHHHHHHhCCCeEEeec----CCceEEEEEcCCCCeEEEEe
Q 028083          172 DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQ  211 (214)
Q Consensus       172 dv~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~~  211 (214)
                      |++++++++++.|+++..++    .|++.++++||+||+|||..
T Consensus        77 d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~Gn~iei~~  120 (121)
T cd07251          77 EVDAVLARAAAAGATIVKPPQDVFWGGYSGYFADPDGHLWEVAH  120 (121)
T ss_pred             HHHHHHHHHHhCCCEEecCCccCCCCceEEEEECCCCCEEEEee
Confidence            89999999999999986432    35789999999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.59  E-value=2.9e-14  Score=122.06  Aligned_cols=108  Identities=19%  Similarity=0.260  Sum_probs=80.0

Q ss_pred             eeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEE-CC-eEEEEEecCCCCCCCCCCCCCCcceEEEE
Q 028083           91 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GA-EMIHLMELPNPDPLSGRPEHGGRDRHTCI  168 (214)
Q Consensus        91 i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~-g~-~~l~l~~~~~~~~~~~~~~~g~g~~hiaf  168 (214)
                      +++++||.|.|+|++++++||+++|||++....+.      .+|+.. ++ ....+.....         ...+++|++|
T Consensus         2 i~~i~Hi~l~V~Dle~s~~FY~~~LG~~~~~~~~~------~~~~~~~~~~~~~~~~l~~~---------~~~g~~hiaf   66 (303)
T TIGR03211         2 VMRLGHVELRVLDLEESLKHYTDVLGLEETGRDGQ------RVYLKAWDEWDHYSVILTEA---------DTAGLDHMAF   66 (303)
T ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeecCc------eEEEEeccccccceEeeccC---------CCCceeEEEE
Confidence            47899999999999999999999999998765321      244443 21 1112211111         1246899999


Q ss_pred             EEC---CHHHHHHHHHhCCCeEEeec-----CCceEEEEEcCCCCeEEEEeec
Q 028083          169 AIR---DVSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       169 ~V~---dv~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      .|+   |+++++++|+++|+++...+     ..+..+||+|||||.|||++..
T Consensus        67 ~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~DPdG~~iEl~~~~  119 (303)
T TIGR03211        67 KVESEADLERLVKRLEAYGVGTGWIPAGELPGVGRRVRFTLPSGHTMELYAEK  119 (303)
T ss_pred             EeCCHHHHHHHHHHHHHcCCCeeeccCCCCCCcceEEEEECCCCCEEEEEEcc
Confidence            998   79999999999999986432     2367899999999999999743

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=99.57  E-value=5e-14  Score=107.53  Aligned_cols=121  Identities=18%  Similarity=0.298  Sum_probs=92.4

Q ss_pred             eeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCC-C---CCCCCC-cceE
Q 028083           91 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS-G---RPEHGG-RDRH  165 (214)
Q Consensus        91 i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~-~---~~~~g~-g~~h  165 (214)
                      +.+..|+.|.+++..+.++||...||++.....|.+..... +|.......+++..+.+..++. +   .+++-+ |.+|
T Consensus        40 ytr~~gm~l~~~~~fke~~Fsl~fL~~~~~~~vP~~~~~~~-v~~~~~~~~~ELthn~Gtes~~~~~~~ngN~~prGfgH  118 (170)
T KOG2944|consen   40 YTRVNGMALLVPDDFKEAKFSLYFLGAEVSEDVPKPEHGVS-VFVFSRNAKLELTHNWGTESPPDQAYLNGNKEPRGFGH  118 (170)
T ss_pred             hhhhccceeechhhhhHhhhHHHhhcccccccCccCCCCCc-eEEecccCceeeecCCCCCCCcchhhcCCCCCCCccce
Confidence            35778888888888888888888888887766554433322 6666666678888777666555 2   233444 8899


Q ss_pred             EEEEECCHHHHHHHHHhCCCeEEeec-CC--ceEEEEEcCCCCeEEEEee
Q 028083          166 TCIAIRDVSKLKMILDKAGISYTLSK-SG--RPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       166 iaf~V~dv~~~~~~l~~~G~~~~~~~-~g--~~~~~~~DPdG~~iEl~~~  212 (214)
                      |||+|+|+++++++|+++|+++.... +|  ...+|+.||||+.|||...
T Consensus       119 Ici~V~di~sac~~lkekGV~f~Kk~~dGk~K~iaF~~dpDgywiei~~~  168 (170)
T KOG2944|consen  119 ICIEVDDINSACERLKEKGVRFKKKLKDGKMKPIAFLHDPDGYWIEIELE  168 (170)
T ss_pred             EEEEeCCHHHHHHHHHHhCceeeecCCCccccceeEEECCCCCeEEEeec
Confidence            99999999999999999999986554 34  3679999999999999754

>PLN02300 lactoylglutathione lyase

Probab=99.55  E-value=1.3e-13  Score=117.62  Aligned_cols=119  Identities=20%  Similarity=0.234  Sum_probs=86.6

Q ss_pred             eeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECC----eEEEEEecCCCCCCCCCCCCCCcceEE
Q 028083           91 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRDRHT  166 (214)
Q Consensus        91 i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~----~~l~l~~~~~~~~~~~~~~~g~g~~hi  166 (214)
                      ..++.|+.|.|+|++++.+||+++|||++......+...+..+++..++    ..+++....+.    .....+++..|+
T Consensus       152 ~~~~~~~~l~~~d~~~a~~Fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~----~~~~~g~~~~~i  227 (286)
T PLN02300        152 PEPLCQVMLRVGDLDRSIKFYEKAFGMKLLRKRDNPEYKYTIAMMGYGPEDKTTVLELTYNYGV----TEYTKGNAYAQI  227 (286)
T ss_pred             CCcceeEEEEeCCHHHHHHHHHhccCCEEEeeecccccceEEEEEecCCCCCccEEEEeecCCC----CccccCCceeEE
Confidence            4578999999999999999999999999975432223334445554422    23444321111    112346788899


Q ss_pred             EEEECCHHHHHHHHHhCCCeEEeec---CC--ceEEEEEcCCCCeEEEEeec
Q 028083          167 CIAIRDVSKLKMILDKAGISYTLSK---SG--RPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       167 af~V~dv~~~~~~l~~~G~~~~~~~---~g--~~~~~~~DPdG~~iEl~~~~  213 (214)
                      +|.|+|+++++++++++|.++..++   .+  ++.++|+||||+.|+|++..
T Consensus       228 ~~~v~di~~~~~~~~~~G~~v~~~p~~~p~~~~~~~~~~DPdG~~i~~~~~~  279 (286)
T PLN02300        228 AIGTDDVYKTAEAIKLVGGKITREPGPLPGINTKITACLDPDGWKTVFVDNI  279 (286)
T ss_pred             EEecCCHHHHHHHHHHcCCeEecCCccCCCCceEEEEEECCCCCEEEEEccc
Confidence            9999999999999999999987542   22  47889999999999999854

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=99.45  E-value=4.3e-13  Score=108.08  Aligned_cols=99  Identities=18%  Similarity=0.178  Sum_probs=74.0

Q ss_pred             eeEeEEEEEcC--CHHHHHHHHHHhcCCEEeeecCCCC--CCceEEEEEE--CCeEEEEEecCCC--CCCCCC---CCCC
Q 028083           92 VSVHHVGILCE--NLERSLEFYQNILGLEINEARPHDK--LPYRGAWLWV--GAEMIHLMELPNP--DPLSGR---PEHG  160 (214)
Q Consensus        92 ~~i~HV~l~V~--D~~~a~~FY~~~LGf~~~~~~~~~~--~~~~~~~l~~--g~~~l~l~~~~~~--~~~~~~---~~~g  160 (214)
                      +++|||++.|+  |++++++||+++|||+.........  ......++..  |+.++.+.++..+  .+....   ...|
T Consensus         2 ~~iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~~~g~i~l~L~~~~~~~~~s~~~~fl~~~~G   81 (191)
T cd07250           2 TRIDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLASPDGKIRIPLNEPASGKRKSQIQEFLEYYGG   81 (191)
T ss_pred             ceeeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEECCCCcEEEEEecCCCCCCccHHHHHHHHhCC
Confidence            68999999999  9999999999999999886543222  2233344554  4578888876653  222111   2247


Q ss_pred             CcceEEEEEECCHHHHHHHHHhCCCeEEee
Q 028083          161 GRDRHTCIAIRDVSKLKMILDKAGISYTLS  190 (214)
Q Consensus       161 ~g~~hiaf~V~dv~~~~~~l~~~G~~~~~~  190 (214)
                      +|++||||.|+|+++++++|+++|+++...
T Consensus        82 ~Gv~HIAf~vdDI~~~~~~L~~~Gv~~l~~  111 (191)
T cd07250          82 AGVQHIALATDDIFATVAALRARGVEFLPI  111 (191)
T ss_pred             CceeEEEEECCCHHHHHHHHHHcCCeeccC
Confidence            899999999999999999999999998543

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=99.38  E-value=8.2e-12  Score=103.43  Aligned_cols=111  Identities=25%  Similarity=0.397  Sum_probs=85.9

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCe-EEEEEecCCCCCCCCCCCCCCcceEEEEEE
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE-MIHLMELPNPDPLSGRPEHGGRDRHTCIAI  170 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~-~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V  170 (214)
                      +.++.|.|.|+|++++..||+++||+++..+..      ..+-+..|+. -+.|.+.++...+   +.+..|+-|+||-+
T Consensus         9 ~~v~~v~L~vrdL~~~~~FY~~ilGL~v~~~~~------~~v~L~vgg~~LL~L~q~~~a~~~---~~~~aGLyH~AfLl   79 (265)
T COG2514           9 TFVGAVTLNVRDLDSMTSFYQEILGLQVLEETD------GSVTLGVGGTPLLTLEQFPDARRP---PPRAAGLYHTAFLL   79 (265)
T ss_pred             cEEEEEEEEeccHHHHHHHHHHhhCCeeeeccC------ceEEEeeCCEEEEEEEeCCCCCCC---Cccccceeeeeeec
Confidence            679999999999999999999999999997654      2244677776 3444443333221   22456889999999


Q ss_pred             C---CHHHHHHHHHhCCCeEEeec--CCceEEEEEcCCCCeEEEEe
Q 028083          171 R---DVSKLKMILDKAGISYTLSK--SGRPAIFTRDPDANALEFTQ  211 (214)
Q Consensus       171 ~---dv~~~~~~l~~~G~~~~~~~--~g~~~~~~~DPdG~~iEl~~  211 (214)
                      +   |+.+++.++...|+++....  .-...+||.||+||-||++-
T Consensus        80 P~r~~L~~~l~hl~~~~~~l~Ga~DH~vSEAlYl~DPEGNGIEiYa  125 (265)
T COG2514          80 PTREDLARVLNHLAEEGIPLVGASDHLVSEALYLEDPEGNGIEIYA  125 (265)
T ss_pred             CCHHHHHHHHHHHHhcCCcccccCcchhheeeeecCCCCCeEEEEe
Confidence            9   68888999999999987332  23789999999999999985

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=99.34  E-value=8.7e-12  Score=110.21  Aligned_cols=140  Identities=11%  Similarity=0.051  Sum_probs=92.9

Q ss_pred             ceeeeceeeeeeceeeecCccCccc---hhhhccCCCCccccCCcceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeec
Q 028083           47 QFLTTKAKMSVEGGILKKEPIRDSD---KIETATNGKHNIKEIRDYGVVSVHHVGILCENLERSLEFYQNILGLEINEAR  123 (214)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~  123 (214)
                      ....+.++..+.++++.+......+   ..+.. ..  ......+..+.+||||++.|+|++.++.||+++|||+..+..
T Consensus       134 ~~~~I~~~G~~~h~lVdr~~~~~~~f~p~f~~~-~~--~~~~~~~~gl~~IDHi~iaV~~ld~a~~fY~~vlGf~~~~~~  210 (398)
T PLN02875        134 VIAEVELYGDVVLRYVSYKGFDGAKFLPGYEPV-ES--SSSFPLDYGLRRLDHAVGNVPNLLPAVNYIAGFTGFHEFAEF  210 (398)
T ss_pred             EEEEEEccCCcEEEEEccCCCCCCccCCCcccc-cc--cccCCCCCCcceeCcceechhhHHHHHHHHHHhcCCeeeeee
Confidence            3444566677777777664321111   11100 00  000112334689999999999999999999999999887543


Q ss_pred             CCCC-----CCceEEEEEEC--CeEEEEEecCC---CCCCCCC---CCCCCcceEEEEEECCHHHHHHHHHhC----CCe
Q 028083          124 PHDK-----LPYRGAWLWVG--AEMIHLMELPN---PDPLSGR---PEHGGRDRHTCIAIRDVSKLKMILDKA----GIS  186 (214)
Q Consensus       124 ~~~~-----~~~~~~~l~~g--~~~l~l~~~~~---~~~~~~~---~~~g~g~~hiaf~V~dv~~~~~~l~~~----G~~  186 (214)
                      ....     ...+...+..+  ..++.|+++..   .+++++.   ...|+|++||||.|+||.+++++|+++    |++
T Consensus       211 d~~~i~~~~sgl~S~vl~sp~g~v~ipLnEP~~~~~~~SqI~eFL~~~~G~GIQHIAl~tdDI~~av~~Lra~~~~~Gv~  290 (398)
T PLN02875        211 TAEDVGTVDSGLNSMVLASNNEMVLLPLNEPTFGTKRKSQIQTYLEHNEGPGLQHLALKSDDIFGTLREMRARSHIGGFE  290 (398)
T ss_pred             ccccccccccceEEEEEEcCCCcEEEEeccCCCCCCCcChHHHHHHhcCCCCeeEEEeecCCHHHHHHHHHhccccCCee
Confidence            2211     12344556653  47899999863   3455542   445799999999999999999999999    999


Q ss_pred             EEe
Q 028083          187 YTL  189 (214)
Q Consensus       187 ~~~  189 (214)
                      +..
T Consensus       291 fL~  293 (398)
T PLN02875        291 FMP  293 (398)
T ss_pred             cCC
Confidence            854

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=99.27  E-value=1.7e-11  Score=107.50  Aligned_cols=104  Identities=16%  Similarity=0.192  Sum_probs=75.6

Q ss_pred             CcceeeeEeEEEEEcC--CHHHHHHHHHHhcCCEEeeecCC-CC-CCceEEEEE--ECCeEEEEEecCCC--CCCCC---
Q 028083           87 RDYGVVSVHHVGILCE--NLERSLEFYQNILGLEINEARPH-DK-LPYRGAWLW--VGAEMIHLMELPNP--DPLSG---  155 (214)
Q Consensus        87 ~~~~i~~i~HV~l~V~--D~~~a~~FY~~~LGf~~~~~~~~-~~-~~~~~~~l~--~g~~~l~l~~~~~~--~~~~~---  155 (214)
                      ..+.+.++|||++.|.  |+++++.||+++|||++...... .. ......++.  .|+.+++++++...  .+...   
T Consensus       152 ~~~~~~~iDHv~i~V~~~dl~~~~~fY~~~lGf~~~~~~~~~~~~~~~~s~~~~~~~g~~~i~L~ep~~~~~~s~i~~fl  231 (353)
T TIGR01263       152 PGVGLIAIDHLVGNVYRGQMEPWAEFYEKIFGFREIRSFDIKTEYSALNSIVMASPDGKVKIPLNEPASGKDKSQIEEFL  231 (353)
T ss_pred             CCCCeEEeeeeEcccCCccHHHHHHHHHHHhCCceeeEEEeccCCccEEEEEEECCCCcEEEEEeccCCCCCCCHHHHHH
Confidence            4567899999999998  99999999999999998754321 11 111112233  25678898876432  22222   


Q ss_pred             CCCCCCcceEEEEEECCHHHHHHHHHhCCCeEEee
Q 028083          156 RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS  190 (214)
Q Consensus       156 ~~~~g~g~~hiaf~V~dv~~~~~~l~~~G~~~~~~  190 (214)
                      ....|+|++||||.|+|+++++++|+++|+++...
T Consensus       232 ~~~~g~Gv~HiAf~vdDi~~~~~~l~~~Gv~~l~~  266 (353)
T TIGR01263       232 EFYNGAGVQHIALNTDDIVRTVRALRARGVEFLDT  266 (353)
T ss_pred             HHcCCCCccEEEEEcCCHHHHHHHHHHcCCccCcC
Confidence            12247899999999999999999999999997643

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=99.26  E-value=1.3e-10  Score=101.93  Aligned_cols=97  Identities=12%  Similarity=0.114  Sum_probs=75.8

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCC--CCCCCcceEEEEE
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGR--PEHGGRDRHTCIA  169 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~--~~~g~g~~hiaf~  169 (214)
                      .+++||.|+|+|++++++||.+.|||++.......... ....++.|+..+.+..+..+.++...  ..+|++++|+||.
T Consensus         1 ~~i~hi~~~V~D~~~a~~~y~~~LGf~~~~~~~~~~~~-~~~~~~~G~~~l~L~~~~~~~s~~~~~~~~hg~gv~~iaf~   79 (353)
T TIGR01263         1 DGFDFVEFYVGDAKQAAYYYFTRFGFEKVAKETGHREK-ASHVLRQGQINFVLTAPYSSDSPAADFAAKHGDGVKDVAFR   79 (353)
T ss_pred             CceEEEEEEeCCHHHHHHHHHHhcCCcEEEEeecCCce-eEEEEEeCCEEEEEecCCCCCchHHHHHHhCCCceEEEEEE
Confidence            36899999999999999999999999998652111111 22336778889999887665443322  4588999999999


Q ss_pred             ECCHHHHHHHHHhCCCeEEe
Q 028083          170 IRDVSKLKMILDKAGISYTL  189 (214)
Q Consensus       170 V~dv~~~~~~l~~~G~~~~~  189 (214)
                      |+|++++++++.++|+++..
T Consensus        80 V~Dv~~a~~~l~~~Ga~~v~   99 (353)
T TIGR01263        80 VDDAAAAFEAAVERGAEPVQ   99 (353)
T ss_pred             ECCHHHHHHHHHHCCCEecc
Confidence            99999999999999998753

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>COG3607 Predicted lactoylglutathione lyase [General function prediction only]

Probab=99.25  E-value=8.5e-11  Score=86.56  Aligned_cols=119  Identities=19%  Similarity=0.218  Sum_probs=81.5

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCC---CCCCCcceEEEE
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGR---PEHGGRDRHTCI  168 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~---~~~g~g~~hiaf  168 (214)
                      ..+..|+|.|.|++++.+||.. |||+.......+.   ...++..+.+.+.|++..........   ....++-.-+|+
T Consensus         2 ~~mIFvNLPVkDL~~S~~Fy~a-lGfk~Npq~sde~---a~~mi~~~ni~vMLL~~~~fq~F~~~~i~dt~~s~evli~l   77 (133)
T COG3607           2 TQMIFVNLPVKDLEASKAFYTA-LGFKFNPQFSDED---AACMIISDNIFVMLLEEARFQTFTKRQIADTTKSREVLISL   77 (133)
T ss_pred             ceEEEEecchhhHHHHHHHHHH-hCcccCCCccccc---ceeEEEeccEEEEEeccHHhhhhcccccccccCCceEEEEe
Confidence            3567899999999999999998 9999985432111   22334445555555443322222111   113344567899


Q ss_pred             EEC---CHHHHHHHHHhCCCeEEeec---CCceEEEEEcCCCCeEEEEeecC
Q 028083          169 AIR---DVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVDG  214 (214)
Q Consensus       169 ~V~---dv~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdG~~iEl~~~~~  214 (214)
                      .+.   ++++.++++.+.|.+...+.   ...+...|.|||||.||+...++
T Consensus        78 s~~s~eevd~~v~ka~eaGGk~~~~~~d~gfMYg~~fqDpDGh~wE~l~m~~  129 (133)
T COG3607          78 SAGSREEVDELVDKALEAGGKPANEPQDEGFMYGRSFQDPDGHVWEFLWMDP  129 (133)
T ss_pred             ccCcHHHHHHHHHHHHHcCCCCCCCccccccccceeeeCCCCCeEEEEEeCH
Confidence            987   79999999999999875332   33778889999999999987653

>COG3324 Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

Probab=99.22  E-value=4.9e-10  Score=83.99  Aligned_cols=113  Identities=20%  Similarity=0.252  Sum_probs=78.6

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECC-eEE-EEEecCCCCCCCCCCCCCCcceEEEEE
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA-EMI-HLMELPNPDPLSGRPEHGGRDRHTCIA  169 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~-~~l-~l~~~~~~~~~~~~~~~g~g~~hiaf~  169 (214)
                      ..+.|..|++.|++++.+||+++||++......-...  ....+..++ ..- .+......      + .++.--.+-|.
T Consensus         8 ~~i~w~Ei~~~D~~ra~~FY~~vFgW~~~~~~~~~~~--~y~~f~~~~~~~gG~l~~~~~~------~-p~~~~~~iy~~   78 (127)
T COG3324           8 GTIVWFELPVSDLERAKAFYEKVFGWTFEDYFDMGEM--RYAVFPADGAGAGGGLMARPGS------P-PGGGGWVIYFA   78 (127)
T ss_pred             CccEEEeeecCCHHHHHHHHHHhhCceecccccCCCc--eEEEEECCCccccceeccCCcC------C-CCCCCEEEEEe
Confidence            4688999999999999999999999999865221111  222222222 000 11111100      0 11233578899


Q ss_pred             ECCHHHHHHHHHhCCCeEEeec----CCceEEEEEcCCCCeEEEEeec
Q 028083          170 IRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       170 V~dv~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      |+|+++..++..+.|-++..++    .+++.+.+.||+||+|-|.++.
T Consensus        79 v~did~~l~rv~~~GG~V~~p~~~~p~~G~~a~~~Dp~Gn~~~l~s~~  126 (127)
T COG3324          79 VDDIDATLERVVAAGGKVLRPKTEFPGGGRIAHFVDPEGNRFGLWSPA  126 (127)
T ss_pred             cCChHHHHHHHHhcCCeEEecccccCCceEEEEEECCCCCEEEEeecC
Confidence            9999999999999999987553    4689999999999999999864

>cd06588 PhnB_like Escherichia coli PhnB and similar proteins; the E

Probab=99.20  E-value=1.1e-09  Score=82.36  Aligned_cols=107  Identities=18%  Similarity=0.142  Sum_probs=74.8

Q ss_pred             EEEc-CCHHHHHHHHHHhcCCEEeeecCCC----------CCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEE
Q 028083           98 GILC-ENLERSLEFYQNILGLEINEARPHD----------KLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT  166 (214)
Q Consensus        98 ~l~V-~D~~~a~~FY~~~LGf~~~~~~~~~----------~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hi  166 (214)
                      .|.+ +|.++|++||+++||+++....+..          ......+-+..++..+.+.........     .++...++
T Consensus         4 ~L~~~~~~~eAi~FY~~~fg~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g~~l~~~d~~~~~~~-----~~~~~~~l   78 (128)
T cd06588           4 YLWFNGNAEEALEFYQSVFGGEITSLTRYGEGPPPDPEEPEGKVMHAELTIGGQRLMASDGGPGFPF-----TFGNGISL   78 (128)
T ss_pred             EEeeCCCHHHHHHHHHHHhCCEeEEEEEcCCCCCCCCCCcCCcEEEEEEEECCEEEEEEcCCCCCCC-----CCCCCEEE
Confidence            4566 9999999999999999998653211          122234557888877777654332211     12234579


Q ss_pred             EEEECC---HHHHHHHHHhCCCeEEee----cCCceEEEEEcCCCCeEEEE
Q 028083          167 CIAIRD---VSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFT  210 (214)
Q Consensus       167 af~V~d---v~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~iEl~  210 (214)
                      ++.|+|   +++++++|.+.| ++..+    ..|.+..+++||+|+.|+|.
T Consensus        79 ~i~~~~~e~v~~~~~~l~~~g-~~~~~~~~~~~g~~~~~v~Dp~G~~W~i~  128 (128)
T cd06588          79 SVECDSEEEADRLFEALSEGG-TVLMPLQKTFWSPLFGWVTDRFGVSWQIN  128 (128)
T ss_pred             EEECCCHHHHHHHHHHHhcCC-eEeccchhcCcccccEEEECCCCCEEEeC
Confidence            999985   778899998877 55432    35678999999999999973

coli phnB gene is found next to an operon involved in the cleavage of carbon-phosphorus bonds in unactivated alkylphosphonates. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to

>COG0346 GloA Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

Probab=99.18  E-value=7.2e-11  Score=86.28  Aligned_cols=120  Identities=23%  Similarity=0.337  Sum_probs=74.3

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCc---eEEEEEECCeEEEEEecCC----C-CCCCC---CCCCC
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPY---RGAWLWVGAEMIHLMELPN----P-DPLSG---RPEHG  160 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~---~~~~l~~g~~~l~l~~~~~----~-~~~~~---~~~~g  160 (214)
                      ++++||+|.|+|+++|.+||+++|||+............   ...+...+...........    . .....   .....
T Consensus         1 ~~l~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (138)
T COG0346           1 MGIHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFFGFEGRAGTGFVGDVALGVPG   80 (138)
T ss_pred             CceEEEEEeeCCHhHhHHHHHhhcCCeeeeecccccCCceEEEEEeccCCCCcccceeecccccccccccccceEEeecC
Confidence            368999999999999999999999999987654332221   1111111110011111100    0 00000   01111


Q ss_pred             --CcceEEEEEECC---HHHHHHHHHhCCCeEEeec--CCceEEEEEcCCCCeEEEEe
Q 028083          161 --GRDRHTCIAIRD---VSKLKMILDKAGISYTLSK--SGRPAIFTRDPDANALEFTQ  211 (214)
Q Consensus       161 --~g~~hiaf~V~d---v~~~~~~l~~~G~~~~~~~--~g~~~~~~~DPdG~~iEl~~  211 (214)
                        .+..|+++.+++   ..+....+...|..+....  ..+..+|++||||+.||+++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~dp~g~~~e~~~  138 (138)
T COG0346          81 GDLGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEPGRGGVHVYFRDPDGILIELAT  138 (138)
T ss_pred             chhccCceeEecccccccceEEEeeCCCCCEEEeecCCCcceEEEEECCCCcEEEeeC
Confidence              246799999998   7777788888888875432  22338999999999999975

>COG3565 Predicted dioxygenase of extradiol dioxygenase family [General function prediction only]

Probab=99.09  E-value=2.5e-09  Score=77.77  Aligned_cols=112  Identities=25%  Similarity=0.433  Sum_probs=74.5

Q ss_pred             eEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEE--EEECCeEEEEEecCCCCCCCCC--CCCCCcceEE--
Q 028083           93 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAW--LWVGAEMIHLMELPNPDPLSGR--PEHGGRDRHT--  166 (214)
Q Consensus        93 ~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~--l~~g~~~l~l~~~~~~~~~~~~--~~~g~g~~hi--  166 (214)
                      .+-|+.|.|.|++++++||.++||++...+..        .|  +..-+.++..-..+.+++...-  ..++--..|+  
T Consensus         4 ~~FHLA~pV~Dl~~tr~FYgevlG~~~GRstd--------~wvdfDfyGHQ~v~Hl~~q~~~~~~g~V~~~~v~~pHfGv   75 (138)
T COG3565           4 VPFHLAIPVNDLDETRRFYGEVLGCKEGRSTD--------TWVDFDFYGHQVVAHLTPQPDSQGSGKVDGHGVPPPHFGV   75 (138)
T ss_pred             cceEEeeeccccHHHHhhhhhhcccccccccc--------eEEEeeecccEEEEEecCCcccccCcccCCCCCCCccceE
Confidence            46799999999999999999999998764432        23  2332333333222223222111  1222233465  


Q ss_pred             EEEECCHHHHHHHHHhCCCeEEeec--------CCceEEEEEcCCCCeEEEEee
Q 028083          167 CIAIRDVSKLKMILDKAGISYTLSK--------SGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       167 af~V~dv~~~~~~l~~~G~~~~~~~--------~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      .|.++|..++.++|.++|+++..++        ...+.+++.||.||.+|+...
T Consensus        76 Vl~~edW~alaerlea~gi~~~i~P~vRF~Ge~gEq~TlFl~DP~gN~lEfK~f  129 (138)
T COG3565          76 VLPVEDWFALAERLEAAGIPFHIPPKVRFKGEPGEQRTLFLFDPSGNALEFKGF  129 (138)
T ss_pred             EEEHHHHHHHHHHHHHcCCCcccCceEEecCCccceEEEEEECCCCCeeeeecc
Confidence            4556699999999999999864332        237889999999999999754

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=99.04  E-value=6.1e-10  Score=93.92  Aligned_cols=103  Identities=16%  Similarity=0.163  Sum_probs=83.0

Q ss_pred             cceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEe-eecCCCCCCceEEE-EEECCeEEEEEecCCCCCCC-C--CCCCCCc
Q 028083           88 DYGVVSVHHVGILCENLERSLEFYQNILGLEIN-EARPHDKLPYRGAW-LWVGAEMIHLMELPNPDPLS-G--RPEHGGR  162 (214)
Q Consensus        88 ~~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~-~~~~~~~~~~~~~~-l~~g~~~l~l~~~~~~~~~~-~--~~~~g~g  162 (214)
                      ...+.+++||.|.|+|..+++.||+..|||++. ++..+.+.+.+..+ ++.|...+.+...-++.... +  ..+||++
T Consensus        12 ~g~~l~f~Hi~F~vgna~q~A~~y~~~fGfep~A~~~letg~~~~~s~alr~g~~vFv~~s~~~p~~~~~G~~l~~Hgdg   91 (381)
T KOG0638|consen   12 AGKFLRFHHIEFWVGNAKQAARWYCSGFGFEPLAYRGLETGSREWASHALRQGKIVFVFNSAYNPDNSEYGDHLVKHGDG   91 (381)
T ss_pred             ccceeeeeEEEEEecCcHHHHHHHHhhcCCcchhcccccccchHHHHHHhhcCCEEEEEecCCCCCchhhhhhhhhcccc
Confidence            445789999999999999999999999999998 55455555444433 77788888888776664422 2  3779999


Q ss_pred             ceEEEEEECCHHHHHHHHHhCCCeEEee
Q 028083          163 DRHTCIAIRDVSKLKMILDKAGISYTLS  190 (214)
Q Consensus       163 ~~hiaf~V~dv~~~~~~l~~~G~~~~~~  190 (214)
                      +..+||+|+|.+++.+.+.++|+.+..+
T Consensus        92 vkdvafeVeD~da~~~~~va~Ga~v~~~  119 (381)
T KOG0638|consen   92 VKDVAFEVEDADAIFQEAVANGAKVVRP  119 (381)
T ss_pred             hhceEEEecchHHHHHHHHHcCCcccCC
Confidence            9999999999999999999999998644

>COG2764 PhnB Uncharacterized protein conserved in bacteria [Function unknown]

Probab=99.02  E-value=2.4e-08  Score=75.96  Aligned_cols=111  Identities=19%  Similarity=0.176  Sum_probs=80.5

Q ss_pred             EEcC-CHHHHHHHHHHhcCCEEeeecCCCC----------CCceEEEEEECCeEEEEEecCCCCCCCCCCCCCC-cceEE
Q 028083           99 ILCE-NLERSLEFYQNILGLEINEARPHDK----------LPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGG-RDRHT  166 (214)
Q Consensus        99 l~V~-D~~~a~~FY~~~LGf~~~~~~~~~~----------~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~-g~~hi  166 (214)
                      |... |.++|++||+++||.+.....+...          ...-++-|..++..+.+........    ...++ .-.-|
T Consensus         6 l~f~gn~~~Al~fY~~vFgae~~~~~~~~d~~~~~~~~~~~~i~HA~l~i~g~~im~sd~~~~~~----~~~~~~~s~~l   81 (136)
T COG2764           6 LFFNGNAREALAFYKEVFGAEELKRVPFGDMPSSAGEPPGGRIMHAELRIGGSTIMLSDAFPDMG----ATEGGGTSLSL   81 (136)
T ss_pred             EEECCCHHHHHHHHHHHhCceEEEEEEcCccCccccccccCceEEEEEEECCEEEEEecCCCccC----cccCCCeeEEE
Confidence            5566 9999999999999999886644333          3344555888887666654332221    11222 23467


Q ss_pred             EEEECCHHHHHHHHHhCCCeEEee----cCCceEEEEEcCCCCeEEEEeec
Q 028083          167 CIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       167 af~V~dv~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      -+.+.|++++++++.+.|++++.+    ..|.+...++||.|+.|-|.+..
T Consensus        82 ~~~~~d~da~f~~a~~aGa~v~mpl~~~fwG~r~G~v~D~fGv~W~l~~~~  132 (136)
T COG2764          82 DLYVEDVDAVFERAAAAGATVVMPLEDTFWGDRYGQVTDPFGVVWMLNTPV  132 (136)
T ss_pred             EEEehHHHHHHHHHHhcCCeEEecchhcCcccceEEEECCCCCEEEEecCc
Confidence            778889999999999999887654    36788999999999999997653

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=98.95  E-value=1.5e-08  Score=89.87  Aligned_cols=96  Identities=16%  Similarity=0.176  Sum_probs=75.4

Q ss_pred             EeEEEEEcCCHHHHHHHHHHhcCCEEee-ecCCCCCCceEEE-EEECCeEEEEEecCCCC-------------------C
Q 028083           94 VHHVGILCENLERSLEFYQNILGLEINE-ARPHDKLPYRGAW-LWVGAEMIHLMELPNPD-------------------P  152 (214)
Q Consensus        94 i~HV~l~V~D~~~a~~FY~~~LGf~~~~-~~~~~~~~~~~~~-l~~g~~~l~l~~~~~~~-------------------~  152 (214)
                      +|||.|+|+|+++++.||...|||+..- ..++++.+....+ ++.|+..+.+..+..+.                   +
T Consensus         1 ~dhvef~v~da~~~~~~f~~~~GF~~~a~~~~~tg~~~~~s~~~r~g~i~fv~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (398)
T PLN02875          1 FHHVEFWCGDATNTARRFSWGLGMPLVAKSDLTTGNTTYASYLLRSGDLVFLFTAPYSPKIGAGDDDPASTAPHPSFSSD   80 (398)
T ss_pred             CeEEEEEcCCHHHHHHHHHHhcCCCeEeecCCCCCCcceEEEEEEeCCEEEEEeCCCCCccccccccccccccccccCcH
Confidence            5899999999999999999999999884 4444555545444 67789888888875441                   0


Q ss_pred             CCC--CCCCCCcceEEEEEECCHHHHHHHHHhCCCeEEe
Q 028083          153 LSG--RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTL  189 (214)
Q Consensus       153 ~~~--~~~~g~g~~hiaf~V~dv~~~~~~l~~~G~~~~~  189 (214)
                      +..  ...||+++..+||+|+|++++++++.+.|.+...
T Consensus        81 ~a~~~~~~HG~gV~dvaf~V~Da~~a~~~A~~~Ga~~~~  119 (398)
T PLN02875         81 AARRFFAKHGLAVRAVGVLVEDAEEAFRTSVAHGARPVL  119 (398)
T ss_pred             HHHHHHHHcCCeeeEEEEEECCHHHHHHHHHHCCCeecc
Confidence            011  1458999999999999999999999999998643

>PF14696 Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal ; PDB: 1CJX_A 2R5V_A

Probab=98.86  E-value=1.1e-08  Score=78.01  Aligned_cols=118  Identities=12%  Similarity=0.088  Sum_probs=77.6

Q ss_pred             CcceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCC--CCCCCCcce
Q 028083           87 RDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG--RPEHGGRDR  164 (214)
Q Consensus        87 ~~~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~--~~~~g~g~~  164 (214)
                      .|+.+.+++||.+.++|.+++..|++. |||+...+...   + ....++.|++++.+...  +++...  ...||+++.
T Consensus         3 nP~g~~G~dFvEFa~~~~~~l~~~~~~-lGF~~~a~hrs---k-~v~l~rQG~I~~vln~e--p~s~a~~~~~~HG~sv~   75 (139)
T PF14696_consen    3 NPLGLDGFDFVEFAVPDAQALAQLFTA-LGFQPVARHRS---K-DVTLYRQGDINFVLNSE--PDSFAAEFAAQHGPSVC   75 (139)
T ss_dssp             -TT-EEEEEEEEEE-SSTTSCHHHHCC-CCEEEECCECC---C-SEEEEEETTEEEEEEEE--STSCHHHHHHHHSSEEE
T ss_pred             CCCCCCCeEEEEEecCCHHHHHHHHHH-hCcceEEecCC---c-ceEEEEeCCEEEEEeCC--CcchHHHHHHhcCCEEE
Confidence            377889999999999998888888865 99999854321   1 12335779998888764  333222  145899999


Q ss_pred             EEEEEECCHHHHHHHHHhCCCeEEeec---CCceEEEEEcCCCCeEEEEe
Q 028083          165 HTCIAIRDVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQ  211 (214)
Q Consensus       165 hiaf~V~dv~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdG~~iEl~~  211 (214)
                      -++|+|+|..++++++.+.|.+....+   .....--++-++|-++-|++
T Consensus        76 aiafrV~Da~~A~~rA~~~GA~~~~~~~~~~e~~~paI~g~G~sl~yfVd  125 (139)
T PF14696_consen   76 AIAFRVDDAAAAYERAVALGAEPVQEPTGPGELNIPAIRGIGGSLHYFVD  125 (139)
T ss_dssp             EEEEEES-HHHHHHHHHHTT--EEEEEEETT-BEEEEEE-CCC-EEEEEE
T ss_pred             EEEEEeCCHHHHHHHHHHcCCcCcccCCCCCcEeeeeEEccCCCEEEEEe
Confidence            999999999999999999999865432   11233344555555555544

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=98.79  E-value=3.3e-09  Score=90.90  Aligned_cols=103  Identities=17%  Similarity=0.234  Sum_probs=80.8

Q ss_pred             cceeeeEeEEEEEc--CCHHHHHHHHHHhcCCEEeeec----CCCCCCceEEEEEECCeEEEEEecCCCCCCCCC---CC
Q 028083           88 DYGVVSVHHVGILC--ENLERSLEFYQNILGLEINEAR----PHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGR---PE  158 (214)
Q Consensus        88 ~~~i~~i~HV~l~V--~D~~~a~~FY~~~LGf~~~~~~----~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~---~~  158 (214)
                      ...+..|||+...|  .+++.++.||+++|||+.....    +....+.+.+--.+|..++.|....+..+.++.   ..
T Consensus       162 ~~g~~~IDHl~~nv~~~~md~w~~FY~~if~~~~~~~fdi~~p~tgl~Sram~Sp~G~vrlplN~s~~~~sqi~efl~~y  241 (363)
T COG3185         162 GVGLTAIDHLTHNVKAGQMDTWVLFYESLFGFREIQYFDIPGPITGLRSRAMVSPCGKVRLPLNESADDKSQIGEFLREY  241 (363)
T ss_pred             ccCceeechhhhhcchhhHHHHHHHHHHHhCccceeeEeccCCcccEEEeeEecCCCcEEeecccCCCchhHHHHHHHHh
Confidence            44457999999976  8999999999999999887432    323333344334457789999888877775553   45


Q ss_pred             CCCcceEEEEEECCHHHHHHHHHhCCCeEEee
Q 028083          159 HGGRDRHTCIAIRDVSKLKMILDKAGISYTLS  190 (214)
Q Consensus       159 ~g~g~~hiaf~V~dv~~~~~~l~~~G~~~~~~  190 (214)
                      +|.|++||||.++||-+++++|+++|+++.+.
T Consensus       242 ~G~GIQHIA~~T~dI~~tv~~lr~rG~~fl~i  273 (363)
T COG3185         242 RGEGIQHIAFGTDDIYATVAALRERGVKFLPI  273 (363)
T ss_pred             CCCcceEEEecccHHHHHHHHHHHcCCccCCC
Confidence            89999999999999999999999999997543

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=98.78  E-value=3.4e-08  Score=80.56  Aligned_cols=115  Identities=19%  Similarity=0.237  Sum_probs=78.8

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCC-------CCc----eEEEEEECCe--EEEEEecCCCCCCCCCCC
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDK-------LPY----RGAWLWVGAE--MIHLMELPNPDPLSGRPE  158 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~-------~~~----~~~~l~~g~~--~l~l~~~~~~~~~~~~~~  158 (214)
                      .++=|+++.|.|..++++||+++|||++.....-+.       +++    ...++..|..  ++.+-.  .-+-......
T Consensus        16 ~r~LH~VfkVgdr~kti~Fyt~vlgMkvLRheef~egc~aacngpyd~kwSktmvGyGpEdshFViEL--TYNYgV~~Ye   93 (299)
T KOG2943|consen   16 RRALHYVFKVGDRAKTIDFYTEVLGMKVLRHEEFEEGCEAACNGPYDGKWSKTMVGYGPEDSHFVIEL--TYNYGVSKYE   93 (299)
T ss_pred             hheeeEeEeecchHHHHHHHHHhhcceeeehhhhhhhhhhhcCCCcccchhhhheecCCCcccEEEEE--EeccCcccee
Confidence            678899999999999999999999999984322111       222    2345666643  332211  1111122344


Q ss_pred             CCCcceEEEEEECCHHHHHHHHHhCCCeEEeecCCceEEEEEcCCCCeEEEEee
Q 028083          159 HGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       159 ~g~g~~hiaf~V~dv~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      -|.+..||.+.++|+-...+++...|-+    ..|.-.+++.||||+.+++.+.
T Consensus        94 lGndfg~i~I~s~dv~~~ve~v~~p~~~----~~g~~~~~v~dPdGykF~l~~~  143 (299)
T KOG2943|consen   94 LGNDFGGITIASDDVFSKVEKVNAPGGK----GSGCGIAFVKDPDGYKFYLIDR  143 (299)
T ss_pred             ccCCcccEEEeHHHHHHHHHHhcCcCCc----ccceEEEEEECCCCcEEEEecc
Confidence            6778889999999999988888776641    2334457789999999999853

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=98.76  E-value=2.5e-08  Score=79.03  Aligned_cols=93  Identities=19%  Similarity=0.316  Sum_probs=57.3

Q ss_pred             EeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCC--CC------CCCCCcceE
Q 028083           94 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS--GR------PEHGGRDRH  165 (214)
Q Consensus        94 i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~--~~------~~~g~g~~h  165 (214)
                      |||+++.|+|++++.++|.+.|||.+.........+.....+..++..++++.........  ..      ...+.|..+
T Consensus         1 lDH~v~~v~dl~~a~~~~~~~lGf~~~~gg~h~~~GT~N~li~f~~~YlEli~i~~~~~~~~~~~~~~~~~~~~~~g~~~   80 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAVERFEQRLGFTVTPGGEHPGWGTANALIPFGDGYLELIAIDPEAPAPDRGRWFGLDRLAGGEGLYG   80 (175)
T ss_dssp             EEEEEEE-TTGGG----GGGS--S--EEEEE-TTT-EEEEEEE-SSSEEEEEEES-HHHSTGGGT-TTTHHHHT--EEEE
T ss_pred             CCEEEEEcCCHHHHHHhhhhcceEeecCCCcCCCCccEEEEEeeCCceEEEEEeCCcccccccccceechhhcCCCCeEE
Confidence            7999999999999999997789999997766555455555566676699999864332211  11      014789999


Q ss_pred             EEEEECCHHHHHHHHHhCCCe
Q 028083          166 TCIAIRDVSKLKMILDKAGIS  186 (214)
Q Consensus       166 iaf~V~dv~~~~~~l~~~G~~  186 (214)
                      +|+.++|+++..+++++.|+.
T Consensus        81 ~~l~t~d~~~~~~~l~~~G~~  101 (175)
T PF13468_consen   81 WALRTDDIEAVAARLRAAGLD  101 (175)
T ss_dssp             EEEE-S-HHHHHHHHHTTT-E
T ss_pred             EEEecCCHHHHHHHHHhcCCC
Confidence            999999999999999999986

>PRK01037 trmD tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein; Reviewed

Probab=98.72  E-value=9.4e-08  Score=82.58  Aligned_cols=105  Identities=17%  Similarity=0.186  Sum_probs=70.8

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEEEEC
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR  171 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V~  171 (214)
                      -..-||+|.|.|+++|.+||..+||+.. +...  .    .+-+  ++..+.+..... +.      +...-.-+|+.++
T Consensus       246 ~~~IfVNLpV~DL~rS~~FYt~LF~~n~-Fsde--~----a~cm--~dtI~vMllt~~-D~------~~~~evLl~Ls~~  309 (357)
T PRK01037        246 PKTFSVVLEVQDLRRAKKFYSKMFGLEC-WDGD--K----LFLL--GKTSLYLQQTKA-EK------KNRGTTTLSLELE  309 (357)
T ss_pred             CceEEEEeeeCCHHHHHHHHHHHhCCCC-CCCC--c----cccc--cCcEEEEEecCC-CC------CCcceEEEEeccC
Confidence            3578999999999999999999877764 3211  1    1112  444334333322 11      1123345899988


Q ss_pred             ---CHHHHHHHHHhCCCeEEeec-CCceEEEEEcCCCCeEEEEee
Q 028083          172 ---DVSKLKMILDKAGISYTLSK-SGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       172 ---dv~~~~~~l~~~G~~~~~~~-~g~~~~~~~DPdG~~iEl~~~  212 (214)
                         +++++++++.++|.....++ +.+..--|.|||||.||++..
T Consensus       310 Sre~VD~lv~~A~aaGG~~~~~~~D~Gf~rsf~D~DGH~WEi~~~  354 (357)
T PRK01037        310 CEHDFVRFLRRWEMLGGELGEQADGHFPLRLVFDLDGHIWVVSCV  354 (357)
T ss_pred             CHHHHHHHHHHHHHcCCCCCCCcccccCcceeECCCCCEEEEEEE
Confidence               69999999999998654332 223377799999999999864

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=98.58  E-value=4.3e-07  Score=75.57  Aligned_cols=97  Identities=23%  Similarity=0.274  Sum_probs=68.4

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCC-CCCCCCcceEEEEEE
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG-RPEHGGRDRHTCIAI  170 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~-~~~~g~g~~hiaf~V  170 (214)
                      +.|.||.|.|.|++++..||++.|||+...+.+      ...|+..|+.+.|+........... .+....|+..+.+.+
T Consensus       167 t~IGHvHL~v~~l~eA~~fY~~~LG~~~~~~~~------~A~F~a~G~YHHHia~N~W~s~~~~~~~~~~~GLa~~~i~~  240 (265)
T COG2514         167 TIIGHVHLKVADLEEAEQFYEDVLGLEVTARGP------SALFLASGDYHHHLAANTWNSRGARPRNANASGLAWLEIHT  240 (265)
T ss_pred             cEEeEEEEEeCCHHHHHHHHHHhcCCeeeecCC------cceEEecCCcceeEEEeccccCCCCCCCCCCCCcceEEEEc
Confidence            679999999999999999999999999997633      3578999998777755443322221 223456777788888


Q ss_pred             CCHHHHHHHHHhCCCeEEeecCCceEEEEEcCCCCeEEEE
Q 028083          171 RDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFT  210 (214)
Q Consensus       171 ~dv~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdG~~iEl~  210 (214)
                      ++-.........                ..||.|+.|.++
T Consensus       241 ~~~~~l~~~~~~----------------~~Dp~G~~i~~~  264 (265)
T COG2514         241 PDPEKLDATGTR----------------LTDPWGIVIRVV  264 (265)
T ss_pred             CCcccccccccc----------------eecCCCceEEEe
Confidence            764332111111                189999999875

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=98.42  E-value=1.2e-06  Score=71.60  Aligned_cols=109  Identities=21%  Similarity=0.314  Sum_probs=73.3

Q ss_pred             eEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCe--EEEEEecCCCCCCCCCCCCCCcceEEEEEE
Q 028083           93 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIAI  170 (214)
Q Consensus        93 ~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~--~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V  170 (214)
                      .+-.|.|.|+|+++|.+||.++|||++.+...    ....+.|..|+.  .++|...-..-.      +..+...++|.+
T Consensus       149 pv~~V~l~VgdL~ks~kyw~~~lgM~ilekee----k~t~~~mgYgd~q~~LElt~~~~~id------~~kg~griafai  218 (299)
T KOG2943|consen  149 PVLQVMLNVGDLQKSIKYWEKLLGMKILEKEE----KYTRARMGYGDEQCVLELTYNYDVID------RAKGFGRIAFAI  218 (299)
T ss_pred             CeEEEEEEehhHHHHHHHHHHHhCcchhhhhh----hhhhhhhccCCcceEEEEEeccCccc------ccccceeEEEec
Confidence            36789999999999999999999999986422    112234555543  455554333211      223444577776


Q ss_pred             C--CHHHHHHHHHhCCCeEEe------ec--CCceEEEEEcCCCCeEEEEe
Q 028083          171 R--DVSKLKMILDKAGISYTL------SK--SGRPAIFTRDPDANALEFTQ  211 (214)
Q Consensus       171 ~--dv~~~~~~l~~~G~~~~~------~~--~g~~~~~~~DPdG~~iEl~~  211 (214)
                      +  ++..+-+.++..+-++..      .+  .+...+-+.|||||.|.|+.
T Consensus       219 p~d~~~~l~e~iK~~n~~i~~~lttl~tPgka~vqvvil~DPDgheicfVd  269 (299)
T KOG2943|consen  219 PTDDLPKLQEAIKSANGTILTPLTTLDTPGKATVQVVILADPDGHEICFVD  269 (299)
T ss_pred             cccccccHHHHHHHhccccccceeeccCCCcceeEEEEEECCCCceEEEec
Confidence            6  788888888887655421      11  23667888999999999874

>PRK10148 hypothetical protein; Provisional

Probab=98.19  E-value=0.00019  Score=55.37  Aligned_cols=108  Identities=15%  Similarity=0.053  Sum_probs=69.3

Q ss_pred             EEEc-CCHHHHHHHHHHhcCCEEeeec-----CC---------------CCCCceEEEEEECCeEEEEEecCCCCCCCCC
Q 028083           98 GILC-ENLERSLEFYQNILGLEINEAR-----PH---------------DKLPYRGAWLWVGAEMIHLMELPNPDPLSGR  156 (214)
Q Consensus        98 ~l~V-~D~~~a~~FY~~~LGf~~~~~~-----~~---------------~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~  156 (214)
                      -|.. +|.++|++||+++||.++....     +.               .....-++-|.+++..+.+...... .    
T Consensus         6 yL~f~g~a~eAi~FY~~~Fgae~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Ha~l~i~g~~lm~sD~~~~-~----   80 (147)
T PRK10148          6 YLSFAGNCADAIAYYQQTLGAELLYKISFGEMPKSAQDSEEGCPSGMQFPDTAIAHANVRIAGSDIMMSDAIPS-G----   80 (147)
T ss_pred             EEEeCCCHHHHHHHHHHHhCCEEEEEEEcccCCccccccccCCCccccCcCCcEEEEEEEECCEEEEEECCCCC-c----
Confidence            3444 5999999999999999886331     10               0122234558888876655432211 1    


Q ss_pred             CCCCCcceEEEEEECCHHH---HHHHHHhCCCeEEee----cCCceEEEEEcCCCCeEEEEee
Q 028083          157 PEHGGRDRHTCIAIRDVSK---LKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       157 ~~~g~g~~hiaf~V~dv~~---~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      +..+. -.++++.++|+++   ++++| +.|.++..+    ..+.+...++||.|+.|.|...
T Consensus        81 ~~~~~-~~~l~l~~~d~ee~~~~~~aL-a~gg~v~mpl~~~~wg~~~g~v~D~fGi~W~l~~~  141 (147)
T PRK10148         81 KAHYS-GFTLVLDTQDVEEGKRWFDNL-AANGKIEMAWQETFWAHGFGKVTDKFGVPWMINVV  141 (147)
T ss_pred             CCCCC-eEEEEEECCCHHHHHHHHHHh-hCCCEEEecchhcchhhccEEEECCCCCEEEEEec
Confidence            11122 3578888888776   56666 466666543    3567788999999999999753

>PF14506 CppA_N: CppA N-terminal; PDB: 3E0R_D

Probab=98.18  E-value=9e-05  Score=54.63  Aligned_cols=110  Identities=18%  Similarity=0.168  Sum_probs=62.1

Q ss_pred             eEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEE--CCeEEEEEecCCCCCCCCCCCCCCcceEEEEEECC
Q 028083           95 HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV--GAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD  172 (214)
Q Consensus        95 ~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~--g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V~d  172 (214)
                      .+-+|.|.|-+...+||+++|||++..+.-      ..+++..  +..++.+-+.++....  .-+....+.++.+.|++
T Consensus         2 ~~PvlRVnnR~~ni~FY~~~LGfkll~EEn------a~a~lg~~~~~erlvlEESP~~rtr--~V~G~KKl~~ivIkv~~   73 (125)
T PF14506_consen    2 IIPVLRVNNRDLNIDFYQKTLGFKLLSEEN------ALAILGDQQKEERLVLEESPSMRTR--AVEGPKKLNRIVIKVPN   73 (125)
T ss_dssp             EEEEEEESSHHHHHHHHTTTT--EEEEEET------TEEEEE-TT--EEEEEEE--TTT-B----SSS-SEEEEEEEESS
T ss_pred             cCceEEEcCHHHhHHHHHhccCcEEeeccc------cEEEecCCCCceEEEEecCCccccc--cccCcceeeEEEEEcCC
Confidence            356889999999999999999999985432      1234433  3456777666554321  11122356789999997


Q ss_pred             HHHHHHHHHhCCCeEEee--cCCceEEEEEcCCCCeEEEEeec
Q 028083          173 VSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       173 v~~~~~~l~~~G~~~~~~--~~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      ..+. +.|.++|..+...  ...++.|-..+|+|.+|.+...+
T Consensus        74 ~~EI-e~LLar~~~~~~l~kg~~gyAfe~vSPEgd~~llhaEd  115 (125)
T PF14506_consen   74 PKEI-EALLARGAQYDRLYKGKNGYAFEAVSPEGDRFLLHAED  115 (125)
T ss_dssp             HHHH-HHHHHC-S--SEEEE-SSSEEEEEE-TT--EEEEE--S
T ss_pred             HHHH-HHHHhcccccceeEEcCCceEEEEECCCCCEEEEEEcC
Confidence            6654 4444555554322  24477888889999999997544

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=98.11  E-value=3e-05  Score=66.93  Aligned_cols=109  Identities=12%  Similarity=0.092  Sum_probs=78.8

Q ss_pred             cceeeeEeEEEEEcCCH-HHHHHHHHHhcCCEEeeecCCCCCCceEEE-EEECCeEEEEEecCCCCCCCC--CCCCCCcc
Q 028083           88 DYGVVSVHHVGILCENL-ERSLEFYQNILGLEINEARPHDKLPYRGAW-LWVGAEMIHLMELPNPDPLSG--RPEHGGRD  163 (214)
Q Consensus        88 ~~~i~~i~HV~l~V~D~-~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~-l~~g~~~l~l~~~~~~~~~~~--~~~~g~g~  163 (214)
                      |+...|+++|.|+|+|+ ++...++.. |||+..-.....     .+. ++.|++.+.+...+.  +...  ...||++.
T Consensus        17 P~~~~GfeFvEf~~~d~~~~l~~l~~~-lGF~~~~~Hrsk-----~v~l~rQGdinlvvn~~~~--s~a~~f~~~Hgps~   88 (363)
T COG3185          17 PEGTDGFEFVEFAVPDPQEALGALLGQ-LGFTAVAKHRSK-----AVTLYRQGDINLVVNAEPD--SFAAEFLDKHGPSA   88 (363)
T ss_pred             CCCCCceeEEEEecCCHHHHHHHHHHH-hCcccccccccc-----ceeEEEeCCEEEEEcCCCc--chhhHHHHhcCCch
Confidence            55578999999999999 555555555 999987542211     233 456887766655433  2222  25699999


Q ss_pred             eEEEEEECCHHHHHHHHHhCCCeEEeec-------------CCceEEEEEcCCC
Q 028083          164 RHTCIAIRDVSKLKMILDKAGISYTLSK-------------SGRPAIFTRDPDA  204 (214)
Q Consensus       164 ~hiaf~V~dv~~~~~~l~~~G~~~~~~~-------------~g~~~~~~~DPdG  204 (214)
                      .-++|.|+|...+++++.+.|.+.....             .|+..+||.|.+|
T Consensus        89 ~a~a~~V~DA~~A~a~A~a~gA~~~~~~~g~~e~~ipai~giggsllyfvd~~~  142 (363)
T COG3185          89 CAMAFRVDDAEQALARALALGARTIDTEIGAGEVDIPAIRGIGGSLLYFVDRYG  142 (363)
T ss_pred             heeEEeeCCHHHHHHHHHHcCCccccCCCCCccccccceeccCCcEEEEeccCC
Confidence            9999999999999999999999643211             3577899999884

>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]

Probab=98.02  E-value=9.4e-07  Score=67.41  Aligned_cols=83  Identities=17%  Similarity=0.131  Sum_probs=64.6

Q ss_pred             CcccccccccEEeeeeccccccccccccceeeccccccceeeeceeeeeeceeeecCccCccchhhhccCCCCccccCCc
Q 028083            9 TAIPVRHQVNRLSVNFTLTYTSSQFYQTTTVRKCRCNGQFLTTKAKMSVEGGILKKEPIRDSDKIETATNGKHNIKEIRD   88 (214)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (214)
                      +.+|+|+|||+|++|++++.|..++++  .++.||+.|    ..+++...+++++.+++.                   .
T Consensus        56 v~aA~~~dv~vIgvSsl~g~h~~l~~~--lve~lre~G----~~~i~v~~GGvip~~d~~-------------------~  110 (143)
T COG2185          56 VRAAVEEDVDVIGVSSLDGGHLTLVPG--LVEALREAG----VEDILVVVGGVIPPGDYQ-------------------E  110 (143)
T ss_pred             HHHHHhcCCCEEEEEeccchHHHHHHH--HHHHHHHhC----CcceEEeecCccCchhHH-------------------H
Confidence            457899999999999999999999999  999999999    888887888888765432                   0


Q ss_pred             ceeeeEeEEEEEcCCHHHHHHHHHHhcC
Q 028083           89 YGVVSVHHVGILCENLERSLEFYQNILG  116 (214)
Q Consensus        89 ~~i~~i~HV~l~V~D~~~a~~FY~~~LG  116 (214)
                      +.-+|++-|.-.-.++.+++.+-.+.++
T Consensus       111 l~~~G~~~if~pgt~~~~~~~~v~~~l~  138 (143)
T COG2185         111 LKEMGVDRIFGPGTPIEEALSDLLTRLG  138 (143)
T ss_pred             HHHhCcceeeCCCCCHHHHHHHHHHHHH
Confidence            1114556666666777887777766554

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=97.74  E-value=2e-05  Score=67.07  Aligned_cols=103  Identities=16%  Similarity=0.104  Sum_probs=71.2

Q ss_pred             CcceeeeEeEEEEEcC--CHHHHHHHHHHhcCCEEeeecCCCCCCc-----eEEEEEEC--CeEEEEEecCCCCCC---C
Q 028083           87 RDYGVVSVHHVGILCE--NLERSLEFYQNILGLEINEARPHDKLPY-----RGAWLWVG--AEMIHLMELPNPDPL---S  154 (214)
Q Consensus        87 ~~~~i~~i~HV~l~V~--D~~~a~~FY~~~LGf~~~~~~~~~~~~~-----~~~~l~~g--~~~l~l~~~~~~~~~---~  154 (214)
                      +.+.+.++||++..++  ..+.+..||.+.|||.--+..+.+..+.     +...+...  .+.+.+.++......   +
T Consensus       172 ~~~~~~~iDH~vgn~p~~em~sa~~wy~~~l~Fhrfwsvdd~~v~te~SaLrs~vlan~~esi~mpinEp~~G~k~ksQI  251 (381)
T KOG0638|consen  172 PKGGLNRIDHVVGNQPDGEMESALRWYEKCLGFHRFWSVDDSQVHTEYSALRSIVLANYEESIKMPINEPAPGKKKKSQI  251 (381)
T ss_pred             CccceeehhhhhccCCcccchHHHHHHHHhhcccccccCCcchhhhHHHHHHHHHHhcCCccEEEeccCCCCCCccHHHH
Confidence            3466789999999998  7889999999999998766554333211     11112222  234555554433211   1


Q ss_pred             CC---CCCCCcceEEEEEECCHHHHHHHHHhCCCeEEe
Q 028083          155 GR---PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTL  189 (214)
Q Consensus       155 ~~---~~~g~g~~hiaf~V~dv~~~~~~l~~~G~~~~~  189 (214)
                      +.   ...|.|++||++-++||-++++.++++|.++..
T Consensus       252 qeyv~y~gG~GvQHiaL~tedIi~Ai~~lr~rG~eFLs  289 (381)
T KOG0638|consen  252 QEYVEYHGGAGVQHIALNTEDIIEAIRGLRARGGEFLS  289 (381)
T ss_pred             HHHHHhcCCCceeeeeecchHHHHHHHHHHhcCCcccc
Confidence            11   335789999999999999999999999999853

>PF06983 3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltransferase; PDB: 1U7I_A 1TSJ_A 1U69_D 3L20_B 3OMS_A

Probab=97.13  E-value=0.031  Score=41.28  Aligned_cols=97  Identities=24%  Similarity=0.272  Sum_probs=60.5

Q ss_pred             cCCHHHHHHHHHHhcCCE-Eee--ecCCC----CCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEEEECC-
Q 028083          101 CENLERSLEFYQNILGLE-INE--ARPHD----KLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD-  172 (214)
Q Consensus       101 V~D~~~a~~FY~~~LGf~-~~~--~~~~~----~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V~d-  172 (214)
                      -+|.++|.+||+++||-. +..  ..+..    ....-.+.+..++..+...... +..     ..+++ ..+++.++| 
T Consensus        10 ~g~a~eA~~fY~~vf~~~~i~~~~~~~~~~~~~~~~v~ha~l~i~g~~lm~~D~~-~~~-----~~~~~-~sl~i~~~~~   82 (116)
T PF06983_consen   10 NGNAEEALEFYKEVFGGSEIMTFGDYPDDEPEWKDKVMHAELTIGGQKLMASDGG-PDF-----PFGNN-ISLCIECDDE   82 (116)
T ss_dssp             SS-HHHHHHHHHHHSTTEEEEEEEE-TTTCTTHTTSEEEEEEEETTEEEEEEEES-TS---------TT-EEEEEEESSH
T ss_pred             CCCHHHHHHHHHHHcCCCEEEEEeECCCCCCCCCCcEEEEEEEECCeEEEEECCC-CCC-----CCCCc-EEEEEEcCCH
Confidence            489999999999999953 322  12211    1222345578888777665544 111     12233 568888885 


Q ss_pred             --HHHHHHHHHhCCCeEEeecCCceEEEEEcCCCCeEEEE
Q 028083          173 --VSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFT  210 (214)
Q Consensus       173 --v~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdG~~iEl~  210 (214)
                        +++++++|.+.|-      .....-.++|..|..|.|+
T Consensus        83 ee~~~~f~~Ls~gG~------~~~~~G~v~DkFGv~Wqiv  116 (116)
T PF06983_consen   83 EEIDRIFDKLSEGGQ------WFSRYGWVTDKFGVSWQIV  116 (116)
T ss_dssp             HHHHHHHHHHHTTTE------TCCEEEEEE-TTS-EEEEE
T ss_pred             HHHHHHHHHHHcCCC------ccceeEEEEeCCCCEEEeC
Confidence              5667889988876      3237788999999999875

>PF15067 FAM124: FAM124 family

Probab=96.19  E-value=0.055  Score=44.55  Aligned_cols=106  Identities=17%  Similarity=0.192  Sum_probs=57.7

Q ss_pred             eEeEEEEEcC--CHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEEEE
Q 028083           93 SVHHVGILCE--NLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  170 (214)
Q Consensus        93 ~i~HV~l~V~--D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V  170 (214)
                      .+--+.|+|.  |.+.+++||+-+|+-+.....+  +   -+.|.-.....+.+.-....-++...+.... -.-+.|.|
T Consensus       128 EilRftly~~~~N~~d~vr~Yelil~~~~~~~k~--~---FC~F~lys~~~~~iQlsLK~lp~~~~p~p~e-savLqF~V  201 (236)
T PF15067_consen  128 EILRFTLYCSFDNYEDMVRFYELILQREPTQQKE--D---FCFFTLYSQPGLDIQLSLKQLPPGMSPEPTE-SAVLQFRV  201 (236)
T ss_pred             cEEEEEEEecCCCHHHHHHHHHHHhccCcceeeC--C---cEEEEEecCCCeEEEEEeccCCCCCCccccc-ceEEEEEe
Confidence            3455778887  9999999999999988875433  2   2333222222223221111111111111111 24589999


Q ss_pred             CCHHHHHHHHHhCCCeEEeecCCceEEEEEcCCCCeEEE
Q 028083          171 RDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEF  209 (214)
Q Consensus       171 ~dv~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdG~~iEl  209 (214)
                      .|+.+++-.|=.-=.++.+    + .--..|||||.|=|
T Consensus       202 ~~igqLvpLLPnpc~PIS~----~-rWqT~D~DGNkILL  235 (236)
T PF15067_consen  202 EDIGQLVPLLPNPCSPISE----T-RWQTEDYDGNKILL  235 (236)
T ss_pred             cchhhhcccCCCCcccccC----C-cceeeCCCCCEecc
Confidence            9999985444221111111    1 24478999999843

>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit

Probab=95.98  E-value=0.0015  Score=49.70  Aligned_cols=86  Identities=13%  Similarity=0.136  Sum_probs=57.2

Q ss_pred             cccccccccEEeeeeccccccccccccceeeccccccceeeeceeeeeece--eeecCccCccchhhhccCCCCccccCC
Q 028083           10 AIPVRHQVNRLSVNFTLTYTSSQFYQTTTVRKCRCNGQFLTTKAKMSVEGG--ILKKEPIRDSDKIETATNGKHNIKEIR   87 (214)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (214)
                      .+|++||+|.||+|++.|.|...+.+  +++.+++.|.    .....+.++  +++.++...   .            ..
T Consensus        46 ~aa~~~~adiVglS~l~~~~~~~~~~--~~~~l~~~gl----~~~~vivGG~~vi~~~d~~~---~------------~~  104 (134)
T TIGR01501        46 KAAIETKADAILVSSLYGHGEIDCKG--LRQKCDEAGL----EGILLYVGGNLVVGKQDFPD---V------------EK  104 (134)
T ss_pred             HHHHHcCCCEEEEecccccCHHHHHH--HHHHHHHCCC----CCCEEEecCCcCcChhhhHH---H------------HH
Confidence            57899999999999999999999888  8999999983    333332333  333322110   0            00


Q ss_pred             cceeeeEeEEEEEcCCHHHHHHHHHHhcC
Q 028083           88 DYGVVSVHHVGILCENLERSLEFYQNILG  116 (214)
Q Consensus        88 ~~~i~~i~HV~l~V~D~~~a~~FY~~~LG  116 (214)
                      .+.-.|++.+.=.-..+++.++|.++.|.
T Consensus       105 ~l~~~Gv~~vF~pgt~~~~iv~~l~~~~~  133 (134)
T TIGR01501       105 RFKEMGFDRVFAPGTPPEVVIADLKKDLN  133 (134)
T ss_pred             HHHHcCCCEEECcCCCHHHHHHHHHHHhc
Confidence            11124666666667788888888877653

This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=95.81  E-value=0.047  Score=39.29  Aligned_cols=50  Identities=18%  Similarity=0.122  Sum_probs=39.2

Q ss_pred             eEEEEEECCHHHHHHHHHh-CCCeEEee----cCCceEEEEEcCCC-CeEEEEeec
Q 028083          164 RHTCIAIRDVSKLKMILDK-AGISYTLS----KSGRPAIFTRDPDA-NALEFTQVD  213 (214)
Q Consensus       164 ~hiaf~V~dv~~~~~~l~~-~G~~~~~~----~~g~~~~~~~DPdG-~~iEl~~~~  213 (214)
                      +|+++.|+|++++.+.+.+ .|+.....    ..+....++..++| ..|||.++.
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~~~~~iELi~p~   56 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGDGPVQIELIQPL   56 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETTETEEEEEEEES
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCCCcEEEEEEEeC
Confidence            5999999999999999998 89876432    23456677888888 689999864

>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain

Probab=95.49  E-value=0.0024  Score=48.42  Aligned_cols=82  Identities=13%  Similarity=0.076  Sum_probs=57.3

Q ss_pred             CcccccccccEEeeeeccccccccccccceeeccccccceeeeceeeeeeceeeecCccCccchhhhccCCCCccccCCc
Q 028083            9 TAIPVRHQVNRLSVNFTLTYTSSQFYQTTTVRKCRCNGQFLTTKAKMSVEGGILKKEPIRDSDKIETATNGKHNIKEIRD   88 (214)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (214)
                      ..+++++++|+|++|++.+.|...+++  +++.+++.+.    .....+.++.++++...                   .
T Consensus        46 v~aa~e~~adii~iSsl~~~~~~~~~~--~~~~L~~~g~----~~i~vivGG~~~~~~~~-------------------~  100 (132)
T TIGR00640        46 ARQAVEADVHVVGVSSLAGGHLTLVPA--LRKELDKLGR----PDILVVVGGVIPPQDFD-------------------E  100 (132)
T ss_pred             HHHHHHcCCCEEEEcCchhhhHHHHHH--HHHHHHhcCC----CCCEEEEeCCCChHhHH-------------------H
Confidence            367899999999999999999999998  8999999883    23334444434432211                   1


Q ss_pred             ceeeeEeEEEEEcCCHHHHHHHHHHhc
Q 028083           89 YGVVSVHHVGILCENLERSLEFYQNIL  115 (214)
Q Consensus        89 ~~i~~i~HV~l~V~D~~~a~~FY~~~L  115 (214)
                      +.=.|++.+--.-.|+...++++.+.+
T Consensus       101 l~~~Gvd~~~~~gt~~~~i~~~l~~~~  127 (132)
T TIGR00640       101 LKEMGVAEIFGPGTPIPESAIFLLKKL  127 (132)
T ss_pred             HHHCCCCEEECCCCCHHHHHHHHHHHH
Confidence            111466666666678888888887643

Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.

>PF14507 CppA_C: CppA C-terminal; PDB: 3E0R_D

Probab=94.34  E-value=0.13  Score=37.00  Aligned_cols=91  Identities=19%  Similarity=0.255  Sum_probs=44.0

Q ss_pred             eEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEEEEC-
Q 028083           93 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR-  171 (214)
Q Consensus        93 ~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V~-  171 (214)
                      .+.-|.|.|+| +++.+||+++||-++                   ...+.+.+..+++-... +...=++..+-|.|+ 
T Consensus         5 ~~e~i~LNV~d-~~~~~fy~~~f~~~~-------------------~~~l~f~ea~G~DL~~~-~~~twDLe~Lkf~V~~   63 (101)
T PF14507_consen    5 EFESIELNVPD-AKSQSFYQSIFGGQL-------------------PFFLTFQEAQGPDLTIE-NNETWDLEMLKFQVPK   63 (101)
T ss_dssp             EE-EEEEEE-T--T---S--H---HHH-------------------TTTEEEEE---CCGSS--TTSBSSEEEEEEEES-
T ss_pred             EEEEEEEeCCC-hhHHHHHHhccccCC-------------------CceEEEeeccCCccccC-CCcEEeeEEEEEEecC
Confidence            46678999999 889999999886211                   12245555444432221 112234567889998 


Q ss_pred             --CHHHHHHHHHhCCCeEEeecCCceEEEEEcCCCCeE
Q 028083          172 --DVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANAL  207 (214)
Q Consensus       172 --dv~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdG~~i  207 (214)
                        |+.++.+++.+.++=+   .....++.+.||.|..|
T Consensus        64 ~~Dl~~L~~~le~~~~fi---dKk~k~l~~~Dps~IEl   98 (101)
T PF14507_consen   64 DFDLAALKSHLEEQEFFI---DKKEKFLVTSDPSQIEL   98 (101)
T ss_dssp             S--HHHHHHHTTTS-EE-----TT-SEEEEE-TTS-EE
T ss_pred             cccHHHHHHHhcccceEe---cCCceEEEEECCcceEE
Confidence              7888889998844422   23356788999998654

>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm)

Probab=94.32  E-value=0.0097  Score=44.85  Aligned_cols=35  Identities=11%  Similarity=0.114  Sum_probs=32.8

Q ss_pred             cccccccccEEeeeeccccccccccccceeecccccc
Q 028083           10 AIPVRHQVNRLSVNFTLTYTSSQFYQTTTVRKCRCNG   46 (214)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   46 (214)
                      .+|++||+|.||+|+|.|.|...+.+  ++..+|+.+
T Consensus        44 ~aa~~~~adiVglS~L~t~~~~~~~~--~~~~l~~~g   78 (128)
T cd02072          44 DAAIETDADAILVSSLYGHGEIDCKG--LREKCDEAG   78 (128)
T ss_pred             HHHHHcCCCEEEEeccccCCHHHHHH--HHHHHHHCC
Confidence            57899999999999999999999998  899999998

Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=92.93  E-value=0.42  Score=35.51  Aligned_cols=54  Identities=15%  Similarity=0.231  Sum_probs=37.4

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEE-CCeEEEEEe
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLME  146 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~-g~~~l~l~~  146 (214)
                      .++.|++|.|.|++++.+..++ .|.++...........+.+|++- ++..+++++
T Consensus        86 ~g~~hia~~v~d~d~~~~~l~~-~G~~~~~~~~~~~~~~r~~~~~DPdG~~iEl~e  140 (142)
T cd08353          86 LGLRRVMFAVDDIDARVARLRK-HGAELVGEVVQYENSYRLCYIRGPEGILIELAE  140 (142)
T ss_pred             CCceEEEEEeCCHHHHHHHHHH-CCCceeCCceecCCCeEEEEEECCCCCEEEeee
Confidence            4789999999999999999998 89988753221222334444443 455666665

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=92.44  E-value=1  Score=31.98  Aligned_cols=50  Identities=18%  Similarity=0.071  Sum_probs=36.1

Q ss_pred             cceEEEEEECCHHHHHHHHHh-CCCeEEeec---C-CceEEEEEcCCCCeEEEEe
Q 028083          162 RDRHTCIAIRDVSKLKMILDK-AGISYTLSK---S-GRPAIFTRDPDANALEFTQ  211 (214)
Q Consensus       162 g~~hiaf~V~dv~~~~~~l~~-~G~~~~~~~---~-g~~~~~~~DPdG~~iEl~~  211 (214)
                      +++|+++.|+|++++.+.+++ .|+.+....   . ....+.+..+++..+|+.+
T Consensus         3 ~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~   57 (125)
T cd08352           3 GIHHVAIICSDYEKSKEFYVEILGFKVIREVYRPERGSYKLDLLLNGGYQLELFS   57 (125)
T ss_pred             ccceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCCCCcEEEEEecCCCcEEEEEE
Confidence            578999999999999999974 899875432   1 1223444556777888765

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=92.24  E-value=0.77  Score=35.43  Aligned_cols=51  Identities=10%  Similarity=0.087  Sum_probs=35.4

Q ss_pred             cceEEEEEECCHHHHHHHHHh-CCCeEEeecCCceEEEEEc-CCCCeEEEEee
Q 028083          162 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRD-PDANALEFTQV  212 (214)
Q Consensus       162 g~~hiaf~V~dv~~~~~~l~~-~G~~~~~~~~g~~~~~~~D-PdG~~iEl~~~  212 (214)
                      |++|+++.|+|++++.+.+.+ .|.++.....+...++..+ .+|+.|+|.+.
T Consensus         1 gl~HI~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~l~l~~~   53 (157)
T cd08347           1 GLHGVTLTVRDPEATAAFLTDVLGFREVGEEGDRVRLEEGGGGPGAVVDVLEE   53 (157)
T ss_pred             CcccEEEEeCCHHHHHHHHHHhcCCEEEeeeCCEEEEEecCCCCCCEEEEEeC
Confidence            578999999999999999975 5988764433322222222 35788888764

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=92.22  E-value=0.55  Score=36.56  Aligned_cols=43  Identities=16%  Similarity=0.184  Sum_probs=32.5

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEE
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLW  136 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~  136 (214)
                      .+++||+|.|+|+.++.+-+++ +|.+.....+ ++..-..+|+.
T Consensus       114 rGfgHIci~V~di~sac~~lke-kGV~f~Kk~~-dGk~K~iaF~~  156 (170)
T KOG2944|consen  114 RGFGHICIEVDDINSACERLKE-KGVRFKKKLK-DGKMKPIAFLH  156 (170)
T ss_pred             CccceEEEEeCCHHHHHHHHHH-hCceeeecCC-CccccceeEEE
Confidence            7999999999999999999999 9999665433 33222445544

>PLN02367 lactoylglutathione lyase

Probab=91.35  E-value=1.2  Score=37.10  Aligned_cols=56  Identities=21%  Similarity=0.361  Sum_probs=41.2

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEE-CCeEEEEEecCC
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPN  149 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~-g~~~l~l~~~~~  149 (214)
                      .+++||+|.|.|++++.+..++ .|.++... |..+...+.+|++- +|..++|++...
T Consensus       168 ~G~~HIaf~VdDVdaa~erL~a-~Gv~~v~~-P~~g~~~riaFIkDPDGn~IEL~e~~~  224 (233)
T PLN02367        168 RGFGHIGITVDDVYKACERFEE-LGVEFVKK-PNDGKMKGIAFIKDPDGYWIEIFDLKT  224 (233)
T ss_pred             CCceEEEEEcCCHHHHHHHHHH-CCCEEEeC-CccCCceEEEEEECCCCCEEEEEeccc
Confidence            5899999999999999999998 99998843 33332234456543 567888887543

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=91.29  E-value=1.1  Score=32.51  Aligned_cols=50  Identities=14%  Similarity=0.164  Sum_probs=34.4

Q ss_pred             cceEEEEEECCHHHHHHHHHhC----CCeEEeecCCceEEEEEcCCCCeEEEEee
Q 028083          162 RDRHTCIAIRDVSKLKMILDKA----GISYTLSKSGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       162 g~~hiaf~V~dv~~~~~~l~~~----G~~~~~~~~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      |++|+.+.|+|++++.+.+.+.    |.+......+ ...|+...++..|++.+.
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~~~-~~~~~~~~~~~~i~l~~~   54 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWED-GRSWRAGDGGTYLVLQQA   54 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhhcCCEEEEeecc-CceEEecCCceEEEEEec
Confidence            4789999999999999988776    8887644322 223333245567777654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=90.91  E-value=1.4  Score=34.06  Aligned_cols=53  Identities=13%  Similarity=0.144  Sum_probs=37.7

Q ss_pred             CcceEEEEEECCHHHHHHHHHh-CCCeEEee-----cC------------C-----ceEEEEEcCCCCeEEEEeec
Q 028083          161 GRDRHTCIAIRDVSKLKMILDK-AGISYTLS-----KS------------G-----RPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       161 ~g~~hiaf~V~dv~~~~~~l~~-~G~~~~~~-----~~------------g-----~~~~~~~DPdG~~iEl~~~~  213 (214)
                      .++.|+++.|+|++++.+-.++ .|.++...     ..            +     ....++..++|..||+.+..
T Consensus         3 ~~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ieL~~~~   78 (162)
T TIGR03645         3 RTFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGDRIGVELFEFK   78 (162)
T ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCCCCcEEEEecc
Confidence            3689999999999999999976 69876310     00            1     22345555778889998864

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=90.88  E-value=1.4  Score=31.40  Aligned_cols=51  Identities=18%  Similarity=0.228  Sum_probs=36.9

Q ss_pred             cceEEEEEECCHHHHHHHHHh-CCCeEEeec---C--CceEEEEEcC---CCCeEEEEee
Q 028083          162 RDRHTCIAIRDVSKLKMILDK-AGISYTLSK---S--GRPAIFTRDP---DANALEFTQV  212 (214)
Q Consensus       162 g~~hiaf~V~dv~~~~~~l~~-~G~~~~~~~---~--g~~~~~~~DP---dG~~iEl~~~  212 (214)
                      |++|+++.|+|++++.+.+++ .|++.....   .  +....++.+.   .|..++|.+.
T Consensus         1 ~i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~   60 (126)
T cd08346           1 GLHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEW   60 (126)
T ss_pred             CcccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEec
Confidence            468999999999999999976 699875332   1  1344556554   6778888764

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>PRK02261 methylaspartate mutase subunit S; Provisional

Probab=90.53  E-value=0.13  Score=39.11  Aligned_cols=36  Identities=11%  Similarity=0.079  Sum_probs=31.6

Q ss_pred             cccccccccEEeeeeccccccccccccceeeccccccc
Q 028083           10 AIPVRHQVNRLSVNFTLTYTSSQFYQTTTVRKCRCNGQ   47 (214)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   47 (214)
                      .++.|+++|++++|++++.+...+.+  +++.++..+.
T Consensus        48 ~~a~~~~~d~V~lS~~~~~~~~~~~~--~~~~L~~~~~   83 (137)
T PRK02261         48 DAAIETDADAILVSSLYGHGEIDCRG--LREKCIEAGL   83 (137)
T ss_pred             HHHHHcCCCEEEEcCccccCHHHHHH--HHHHHHhcCC
Confidence            56789999999999999999988877  7888888863

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=90.36  E-value=1.5  Score=31.38  Aligned_cols=30  Identities=13%  Similarity=0.398  Sum_probs=26.6

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeee
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEA  122 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~  122 (214)
                      .++.|+.|.|.|++++.+..++ .|.++...
T Consensus        71 ~g~~h~~f~v~d~~~~~~~l~~-~G~~~~~~  100 (128)
T cd07249          71 EGLHHIAFEVDDIDAALARLKA-QGVRLLQE  100 (128)
T ss_pred             CceEEEEEEeCCHHHHHHHHHH-CCCeeecc
Confidence            5789999999999999999988 89988754

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>PF13670 PepSY_2: Peptidase propeptide and YPEB domain This Prosite motif covers only the active site

Probab=90.14  E-value=1.2  Score=30.48  Aligned_cols=40  Identities=18%  Similarity=0.198  Sum_probs=33.6

Q ss_pred             CHHHHHHHHHhCCCeEEe--e-cCCceEEEEEcCCCCeEEEEe
Q 028083          172 DVSKLKMILDKAGISYTL--S-KSGRPAIFTRDPDANALEFTQ  211 (214)
Q Consensus       172 dv~~~~~~l~~~G~~~~~--~-~~g~~~~~~~DPdG~~iEl~~  211 (214)
                      .++++.+.+.+.|+.+..  - .++.+.+...|.||+.+|++=
T Consensus        30 ~~~~~~~~l~~~G~~v~~ve~~~~g~yev~~~~~dG~~~ev~v   72 (83)
T PF13670_consen   30 SIEQAVAKLEAQGYQVREVEFDDDGCYEVEARDKDGKKVEVYV   72 (83)
T ss_pred             CHHHHHHHHHhcCCceEEEEEcCCCEEEEEEEECCCCEEEEEE
Confidence            788999999999997643  2 456899999999999999973

This is family M4 in the peptidase classification.

>PRK11478 putative lyase; Provisional

Probab=88.99  E-value=2.8  Score=30.24  Aligned_cols=54  Identities=9%  Similarity=0.180  Sum_probs=34.9

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEE-ECCeEEEEEe
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLW-VGAEMIHLME  146 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~-~g~~~l~l~~  146 (214)
                      .++.|++|.|.|++++.+-.++ .|.++...........+.+|+. .++..+++++
T Consensus        74 ~g~~hi~f~v~d~~~~~~~l~~-~G~~~~~~~~~~~~g~~~~~~~DPdG~~iEl~~  128 (129)
T PRK11478         74 CGLRHLAFSVDDIDAAVAHLES-HNVKCEAIRVDPYTQKRFTFFNDPDGLPLELYE  128 (129)
T ss_pred             CceeEEEEEeCCHHHHHHHHHH-cCCeeeccccCCCCCCEEEEEECCCCCEEEEEe
Confidence            4789999999999999998887 8998764221111122334443 2455566553

>PRK10291 glyoxalase I; Provisional

Probab=88.52  E-value=3.3  Score=30.19  Aligned_cols=57  Identities=16%  Similarity=0.136  Sum_probs=39.5

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeee-cCCCCCCceEEEEE-ECCeEEEEEecCC
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEA-RPHDKLPYRGAWLW-VGAEMIHLMELPN  149 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~-~~~~~~~~~~~~l~-~g~~~l~l~~~~~  149 (214)
                      .++.|++|.|.|++++.+-.++ .|.++... .+........+|+. .++..+++++...
T Consensus        64 ~~~~hlaf~V~d~~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~i~DPdG~~iel~~~~~  122 (129)
T PRK10291         64 TAYGHIALSVDNAAEACEKIRQ-NGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKD  122 (129)
T ss_pred             CCeeEEEEEeCCHHHHHHHHHH-cCCccccCCcccCCCceEEEEEECCCCCEEEEEEccc
Confidence            4689999999999999999987 89887642 22222222334533 4567888887654

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=88.43  E-value=3.3  Score=30.16  Aligned_cols=51  Identities=14%  Similarity=0.194  Sum_probs=35.4

Q ss_pred             cceEEEEEECCHHHHHHHHHh-CCCeEEeecCCceEEEEEcC--CCCeEEEEee
Q 028083          162 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDP--DANALEFTQV  212 (214)
Q Consensus       162 g~~hiaf~V~dv~~~~~~l~~-~G~~~~~~~~g~~~~~~~DP--dG~~iEl~~~  212 (214)
                      ++.|+.+.|+|++++.+.+.+ .|.++.....+....++..+  .+..+++.+.
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~   54 (134)
T cd08348           1 RLSHVVLYVRDLEAMVRFYRDVLGFTVTDRGPLGGLVFLSRDPDEHHQIALITG   54 (134)
T ss_pred             CeeEEEEEecCHHHHHHHHHHhcCCEEEeeccCCcEEEEEecCCCceEEEEEec
Confidence            368999999999999999976 89987654332234454443  3456777653

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=88.16  E-value=1.8  Score=29.83  Aligned_cols=50  Identities=12%  Similarity=0.149  Sum_probs=34.1

Q ss_pred             ceEEEEEECCHHHHHHHHH-hCCCeEEeecC-CceEEEEEcCCCCeEEEEee
Q 028083          163 DRHTCIAIRDVSKLKMILD-KAGISYTLSKS-GRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       163 ~~hiaf~V~dv~~~~~~l~-~~G~~~~~~~~-g~~~~~~~DPdG~~iEl~~~  212 (214)
                      ++|+++.|+|++++.+.+. ..|+....... .....++..+++..++|.+.
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~i~l~~~   52 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPFLFPGAWLYAGDGPQLHLIEE   52 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCCCCCceEEEeCCCcEEEEEec
Confidence            4799999999999999886 67887653322 12334555555567887754

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=87.60  E-value=2.7  Score=28.45  Aligned_cols=48  Identities=15%  Similarity=0.214  Sum_probs=36.7

Q ss_pred             EEEEEECCHHHHHHHHHh-CCCeEEeecC--CceEEEEEcCCCCeEEEEeec
Q 028083          165 HTCIAIRDVSKLKMILDK-AGISYTLSKS--GRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       165 hiaf~V~dv~~~~~~l~~-~G~~~~~~~~--g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      |+.+.++|++++.+.+.+ .|.+......  .....++.++ +..|+|.+.+
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~-~~~i~l~~~~   51 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGNGGAEFAVLGLG-GTRLELFEGD   51 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeeccCCEEEEEEecC-CceEEEecCC
Confidence            789999999999999997 8998765543  3455666655 7888887654

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=87.36  E-value=3.9  Score=28.99  Aligned_cols=50  Identities=20%  Similarity=0.227  Sum_probs=34.3

Q ss_pred             ceEEEEEECCHHHHHHHHHh-CCCeEEee---c-CCceEEEEEcCCCCeEEEEee
Q 028083          163 DRHTCIAIRDVSKLKMILDK-AGISYTLS---K-SGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       163 ~~hiaf~V~dv~~~~~~l~~-~G~~~~~~---~-~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      ++|+++.|+|++++.+-+++ .|.+....   . .+....|+.-.+|..+++++.
T Consensus         2 ~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   56 (125)
T cd07241           2 IEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKGFESYFLSFDDGARLELMTR   56 (125)
T ss_pred             ceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCCceEEEEecCCCcEEEEEcC
Confidence            58999999999999998876 58875321   1 222333444446778888753

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=87.31  E-value=3.5  Score=29.45  Aligned_cols=49  Identities=8%  Similarity=0.073  Sum_probs=34.0

Q ss_pred             cceEEEEEECCHHHHHHHHHh-CCCeEEeecCCceEEEEEcCC-CCeEEEEee
Q 028083          162 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPD-ANALEFTQV  212 (214)
Q Consensus       162 g~~hiaf~V~dv~~~~~~l~~-~G~~~~~~~~g~~~~~~~DPd-G~~iEl~~~  212 (214)
                      .+.|+.+.|+|++++.+.+.+ .|.++.....  ..+++..++ +..|.|.+.
T Consensus         2 ~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~--~~~~l~~~~~~~~l~l~~~   52 (125)
T cd07255           2 RIGAVTLRVADLERSLAFYQDVLGLEVLERTD--STAVLGTGGKRPLLVLEED   52 (125)
T ss_pred             EEEEEEEEECCHHHHHHHHHhccCcEEEEcCC--CEEEEecCCCeEEEEEEeC
Confidence            368999999999999999886 6998865432  234444443 456666553

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=87.09  E-value=4.8  Score=29.75  Aligned_cols=58  Identities=12%  Similarity=0.015  Sum_probs=41.2

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEE-CCeEEEEEecCCC
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNP  150 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~-g~~~l~l~~~~~~  150 (214)
                      .++.|++|.|.|++++.+-.++ .|.++...........+.+|++- ++..+++++...-
T Consensus        68 ~g~~hia~~V~Dvda~~~~l~~-~G~~v~~~p~~~~~~~~~~~i~dp~G~~ie~~~~~~~  126 (136)
T cd08342          68 DGVCDVAFRVDDAAAAYERAVA-RGAKPVQEPVEEPGELKIAAIKGYGDSLHTLVDRKGY  126 (136)
T ss_pred             CceEEEEEEeCCHHHHHHHHHH-cCCeEccCceecCCeEEEEEEeccCCcEEEEEecCCC
Confidence            4688999999999999999998 89998753222133445555543 5678888875543

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=86.94  E-value=3.9  Score=32.67  Aligned_cols=56  Identities=21%  Similarity=0.362  Sum_probs=39.6

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEE-ECCeEEEEEecCC
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLW-VGAEMIHLMELPN  149 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~-~g~~~l~l~~~~~  149 (214)
                      .++.|++|.|.|++++.+..++ .|.++... +........+|+. .++..++|++..+
T Consensus       120 ~G~~Hlaf~V~Dvd~~~~~L~~-~Gv~v~~~-p~~~~~~~~~fi~DPdG~~IEl~e~~~  176 (185)
T PLN03042        120 RGFGHIGITVDDVYKACERFEK-LGVEFVKK-PDDGKMKGLAFIKDPDGYWIEIFDLKR  176 (185)
T ss_pred             CCccEEEEEcCCHHHHHHHHHH-CCCeEEeC-CccCCceeEEEEECCCCCEEEEEECCC
Confidence            4899999999999999999998 99988743 3222222334433 3566788877544

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=86.42  E-value=2.7  Score=30.07  Aligned_cols=47  Identities=15%  Similarity=0.215  Sum_probs=30.1

Q ss_pred             ceEEEEEECCHHHHHHHHHhCCCeEEeecCCceEEEEEcCCCCeEEE
Q 028083          163 DRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEF  209 (214)
Q Consensus       163 ~~hiaf~V~dv~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdG~~iEl  209 (214)
                      +.|+++.|+|++++.+-.++.|.+......+...+.+..++|..+.+
T Consensus         1 ~~~i~l~V~D~~~a~~FY~~LGf~~~~~~~~~~~~~~~~~~~~~l~l   47 (122)
T cd07235           1 LDAVGIVVADMAKSLDFYRRLGFDFPEEADDEPHVEAVLPGGVRLAW   47 (122)
T ss_pred             CceEEEEeccHHHHHHHHHHhCceecCCcCCCCcEEEEeCCCEEEEE
Confidence            36899999999999999988898764322211233344444444433

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>COG3865 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=85.93  E-value=14  Score=28.43  Aligned_cols=105  Identities=10%  Similarity=0.040  Sum_probs=60.1

Q ss_pred             eEeEEEEEcCCHHHHHHHHHHhcCCEEe---eecCCC--C---CCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcce
Q 028083           93 SVHHVGILCENLERSLEFYQNILGLEIN---EARPHD--K---LPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDR  164 (214)
Q Consensus        93 ~i~HV~l~V~D~~~a~~FY~~~LGf~~~---~~~~~~--~---~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~  164 (214)
                      ++.-.-++-.+.++|..||.++|-=.-.   .+.|..  +   +..-.+-++.++..+.-+.....    ....+...  
T Consensus         5 kit~~L~F~~~AeeA~~fY~s~FpdS~i~~i~r~p~~~~~g~~G~Vl~a~F~l~g~~f~~ld~g~~----~~f~fneA--   78 (151)
T COG3865           5 KITPFLWFDGNAEEAMNFYLSTFPDSKIIGITRYPEGEPGGKEGKVLVAEFTLNGQSFMALDGGPN----TSFKFNEA--   78 (151)
T ss_pred             cceeEEEECCcHHHHHHHHHHhCCcceeeeeeecCCCCCCCCCccEEEEEEEECCeEEEEEcCCCC----cCCCcCcc--
Confidence            4444445569999999999998865322   122221  1   12223446677754443322211    11223333  


Q ss_pred             EEEEEEC-----CHHHHHHHHHhCCCeEEeecCCceEEEEEcCCCCeEEEE
Q 028083          165 HTCIAIR-----DVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFT  210 (214)
Q Consensus       165 hiaf~V~-----dv~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdG~~iEl~  210 (214)
                       +.|.|.     .+|++...|...|-      .-...-+++|-.|.-|.|.
T Consensus        79 -~S~~v~~~~q~E~Drlwnal~~~g~------e~~~cgW~kDKfGVSWQi~  122 (151)
T COG3865          79 -FSFQVACDDQEEIDRLWNALSDNGG------EAEACGWLKDKFGVSWQIV  122 (151)
T ss_pred             -EEEEEEcCCHHHHHHHHHHHhccCc------chhcceeEecccCcEEEEc
Confidence             555554     57778888888776      2234567888888888775

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=85.49  E-value=4.6  Score=28.51  Aligned_cols=49  Identities=27%  Similarity=0.400  Sum_probs=34.0

Q ss_pred             ceEEEEEECCHHHHHHHHHhC-CCeEEeec--C-Cc-eEEEEEcCC---CCeEEEEe
Q 028083          163 DRHTCIAIRDVSKLKMILDKA-GISYTLSK--S-GR-PAIFTRDPD---ANALEFTQ  211 (214)
Q Consensus       163 ~~hiaf~V~dv~~~~~~l~~~-G~~~~~~~--~-g~-~~~~~~DPd---G~~iEl~~  211 (214)
                      +.|+++.|+|++++.+.+.+. |.+.....  . +. ..+++..++   +..+++.+
T Consensus         1 ~~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~   57 (121)
T cd07233           1 FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTY   57 (121)
T ss_pred             CeeEEEEecCcHHHHHHHHhccCCeEEEEEecCCCceEEEEecCCCCCCccEEEEEe
Confidence            369999999999999999865 99875432  2 22 334454444   57788764

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=85.10  E-value=4.5  Score=28.21  Aligned_cols=47  Identities=13%  Similarity=0.157  Sum_probs=33.8

Q ss_pred             EEEEEECCHHHHHHHHHh-CCCeEEeec---CCceEEEEEcCCC--CeEEEEe
Q 028083          165 HTCIAIRDVSKLKMILDK-AGISYTLSK---SGRPAIFTRDPDA--NALEFTQ  211 (214)
Q Consensus       165 hiaf~V~dv~~~~~~l~~-~G~~~~~~~---~g~~~~~~~DPdG--~~iEl~~  211 (214)
                      |+++.|+|++++.+.+.+ .|+++....   .+...+.+.++++  ..+++.+
T Consensus         1 Hv~l~v~d~~~~~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~   53 (119)
T cd07263           1 LVSLYVDDQDKALAFYTEKLGFEVREDVPMGGGFRWVTVAPPGSPETSLVLAP   53 (119)
T ss_pred             CceEEeCCHHHHHHHHHhccCeEEEEeeccCCCcEEEEEeCCCCCeeEEEEeC
Confidence            899999999999999987 899886543   2345555666654  3555543

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=84.18  E-value=5.8  Score=28.46  Aligned_cols=48  Identities=10%  Similarity=0.063  Sum_probs=31.7

Q ss_pred             cceEEEEEECCHHHHHHHHHh-CCCeEEeecCCceEEEEEcC-CCCeEEEE
Q 028083          162 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDP-DANALEFT  210 (214)
Q Consensus       162 g~~hiaf~V~dv~~~~~~l~~-~G~~~~~~~~g~~~~~~~DP-dG~~iEl~  210 (214)
                      ++.|+++.|+|++++.+-++. .|.+......+. ..++..+ .++.+.+.
T Consensus         2 ~l~~v~l~v~Dl~~s~~FY~~~LG~~~~~~~~~~-~~~~~~~~~~~~~~l~   51 (120)
T cd07252           2 SLGYLGVESSDLDAWRRFATDVLGLQVGDRPEDG-ALYLRMDDRAWRIAVH   51 (120)
T ss_pred             cccEEEEEeCCHHHHHHHHHhccCceeccCCCCC-eEEEEccCCceEEEEE
Confidence            468999999999999999976 699875432222 3444433 34445554

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=83.82  E-value=4.5  Score=28.89  Aligned_cols=30  Identities=23%  Similarity=0.512  Sum_probs=25.9

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeee
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEA  122 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~  122 (214)
                      .++.|++|.|.|++++.+..++ .|.++...
T Consensus        71 ~g~~~i~~~v~di~~~~~~l~~-~G~~~~~~  100 (128)
T TIGR03081        71 GGIHHIAIEVDDIEAALETLKE-KGVRLIDE  100 (128)
T ss_pred             CceEEEEEEcCCHHHHHHHHHH-CCCcccCC
Confidence            4788999999999999999887 79887653

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>PF06185 YecM: YecM protein; InterPro: IPR010393 This family consists of several bacterial YecM proteins of unknown function

Probab=83.52  E-value=14  Score=29.52  Aligned_cols=77  Identities=17%  Similarity=0.085  Sum_probs=44.0

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEE-----EEECCeEEEEEecCCCCCCCCCCCCCCcceEE
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAW-----LWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT  166 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~-----l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hi  166 (214)
                      ..+|||+++|.+.+.|..|-+..+-.--.-..-.-.++--..|     +..++..+..++.+-|..-   .-.-.|.-||
T Consensus        33 ~~~DHialRvn~~~~A~~~~~~l~~~G~llSen~INGRPI~l~~L~qPL~~~~~~I~~vELP~P~~K---~Yp~eGWEHI  109 (185)
T PF06185_consen   33 YEIDHIALRVNSNETAERWKQALLQCGELLSENMINGRPICLFKLNQPLQFGGWSIDCVELPYPKDK---RYPQEGWEHI  109 (185)
T ss_dssp             -EEEEEEEE-S-HHHHHHHHHHHTTTEEEEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEE---SS-----SS-EEEEE
T ss_pred             cCCcEEEEecCCHHHHHHHHHHHHHhChhhhhceeCCeeEEEEEcCCchhcCCeeEEEEEeCCCCCC---CCCCCCceEE
Confidence            4799999999999999999998776643221111112212222     4567888888887766431   1134688999


Q ss_pred             EEEEC
Q 028083          167 CIAIR  171 (214)
Q Consensus       167 af~V~  171 (214)
                      -|-++
T Consensus       110 E~Vip  114 (185)
T PF06185_consen  110 EFVIP  114 (185)
T ss_dssp             EEE--
T ss_pred             EEEec
Confidence            99998

; PDB: 1K4N_A.

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=82.22  E-value=7.9  Score=27.23  Aligned_cols=28  Identities=18%  Similarity=0.220  Sum_probs=24.0

Q ss_pred             cceEEEEEECCHHHHHHHHHh-CCCeEEe
Q 028083          162 RDRHTCIAIRDVSKLKMILDK-AGISYTL  189 (214)
Q Consensus       162 g~~hiaf~V~dv~~~~~~l~~-~G~~~~~  189 (214)
                      |++|+++.|.|++++.+-+.. .|.++..
T Consensus         1 ~l~Hi~i~v~d~~~~~~FY~~~lG~~~~~   29 (128)
T PF00903_consen    1 GLDHIAIRVKDLEKAIDFYTDVLGFRLVE   29 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTTSEEEE
T ss_pred             CeEEEEEEcCCHHHHHHHHHHHhCCcEEe
Confidence            478999999999999998876 6998754

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=81.76  E-value=8.2  Score=29.01  Aligned_cols=56  Identities=16%  Similarity=0.125  Sum_probs=38.6

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeee-cCCCCCCceEEEEE-ECCeEEEEEecC
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEA-RPHDKLPYRGAWLW-VGAEMIHLMELP  148 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~-~~~~~~~~~~~~l~-~g~~~l~l~~~~  148 (214)
                      .++.|+.|.|.|++++.+...+ .|.++... .+........+|+. ..+..+++++..
T Consensus        85 ~g~~hi~f~v~dld~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  142 (150)
T TIGR00068        85 NGFGHIAIGVDDVYKACERVRA-LGGNVVREPGPVKGGTTVIAFVEDPDGYKIELIQRK  142 (150)
T ss_pred             CceeEEEEecCCHHHHHHHHHH-cCCccccCCcccCCCceEEEEEECCCCCEEEEEECC
Confidence            4789999999999999999988 99887642 22222222344433 356788887654

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=81.11  E-value=7.3  Score=27.75  Aligned_cols=49  Identities=14%  Similarity=0.194  Sum_probs=32.8

Q ss_pred             ceEEEEEECCHHHHHHHHHh----CCCeEEeecCCceEEEEEcC-CCCeEEEEee
Q 028083          163 DRHTCIAIRDVSKLKMILDK----AGISYTLSKSGRPAIFTRDP-DANALEFTQV  212 (214)
Q Consensus       163 ~~hiaf~V~dv~~~~~~l~~----~G~~~~~~~~g~~~~~~~DP-dG~~iEl~~~  212 (214)
                      +.|+.+.|+|++++.+-+++    .|.+......+. .+.+..+ .+..+.++..
T Consensus         1 l~hv~l~v~d~~~s~~FY~~~f~~lg~~~~~~~~~~-~~~~~~~~~~~~~~l~~~   54 (123)
T cd07262           1 IDHVTLGVNDLERARAFYDAVLAPLGIKRVMEDGPG-AVGYGKGGGGPDFWVTKP   54 (123)
T ss_pred             CcEEEEecCcHHHHHHHHHHHHhhcCceEEeecCCc-eeEeccCCCCceEEEecc
Confidence            36999999999999998887    488875443222 3344444 3566666553

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=80.77  E-value=7  Score=27.49  Aligned_cols=29  Identities=14%  Similarity=0.225  Sum_probs=25.0

Q ss_pred             cceEEEEEECCHHHHHHHHHh-CCCeEEee
Q 028083          162 RDRHTCIAIRDVSKLKMILDK-AGISYTLS  190 (214)
Q Consensus       162 g~~hiaf~V~dv~~~~~~l~~-~G~~~~~~  190 (214)
                      ++.|+.+.|+|++++.+-+++ .|.+....
T Consensus         3 ~l~hi~l~v~d~~~s~~Fy~~~lG~~~~~~   32 (125)
T cd07253           3 RIDHVVLTVADIEATLDFYTRVLGMEVVRF   32 (125)
T ss_pred             ccceEEEEecCHHHHHHHHHHHhCceeecc
Confidence            578999999999999999887 69887644

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=80.36  E-value=8.8  Score=27.06  Aligned_cols=28  Identities=11%  Similarity=0.199  Sum_probs=24.6

Q ss_pred             cceEEEEEECCHHHHHHHHHhCCCeEEe
Q 028083          162 RDRHTCIAIRDVSKLKMILDKAGISYTL  189 (214)
Q Consensus       162 g~~hiaf~V~dv~~~~~~l~~~G~~~~~  189 (214)
                      ++.|+++.|+|++++.+.+...|+.+..
T Consensus         2 ~i~hv~l~v~d~~~s~~FY~~lG~~~~~   29 (112)
T cd08344           2 SIDHFALEVPDLEVARRFYEAFGLDVRE   29 (112)
T ss_pred             ceeEEEEecCCHHHHHHHHHHhCCcEEe
Confidence            5789999999999999988888988754

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	214
3rmu_A	134	Crystal Structure Of Human Methylmalonyl-Coa Epimer		3e-06

>pdb|3RMU|A Chain A, Crystal Structure Of Human Methylmalonyl-Coa Epimerase, Mcee Length = 134

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 14/121 (11%)
Query: 94  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRG---AWLWVG---AEMIHLMEL 147
           ++HV I   +LE++  FY+NILG +++EA P   LP  G    ++ +G    E++H + L
Sbjct: 6   LNHVAIAVPDLEKAAAFYKNILGAQVSEAVP---LPEHGVSVVFVNLGNTKMELLHPLGL 62
Query: 148 PNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGI-----SYTLSKSGRPAIFTRDP 202
            +P     +    G   H CI + +++   M L K  I        +   G+P IF    
Sbjct: 63  DSPIAGFLQKNKAGGMHHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPK 122
Query: 203 D 203
           D
Sbjct: 123 D 123

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	214
2p25_A	126	Glyoxalase family protein; structural genomics, MC	1e-31
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	3e-28
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	1e-27
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	4e-25
1nki_A	135	Probable fosfomycin resistance protein; potassium	4e-23
3ghj_A	141	Putative integron gene cassette protein; integron	2e-22
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	1e-21
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	2e-20
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	3e-19
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	7e-19
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	1e-17
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	2e-17
3huh_A	152	Virulence protein STM3117; structural genomics, ny	6e-17
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	8e-17
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	2e-16
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	3e-16
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	1e-15
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	4e-14
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	5e-14
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	1e-13
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	1e-13
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	3e-12
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	6e-12
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	1e-05
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	2e-11
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	3e-05
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	5e-11
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	7e-11
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	9e-11
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	1e-10
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	4e-10
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	5e-10
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	7e-10
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	5e-09
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	1e-08
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	2e-08
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	3e-08
2i7r_A	118	Conserved domain protein; structural genomics cons	3e-08
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	6e-08
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	7e-08
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	7e-08
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	2e-06
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	9e-08
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	1e-07
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	2e-07
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	4e-07
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	4e-07
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	1e-05
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	4e-07
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	2e-06
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	2e-06
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	3e-06
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	4e-06
3eck_A	365	Protein (homoprotocatechuate 2,3-dioxygenase); oxi	4e-06
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	5e-06
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	2e-04
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	9e-06
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	3e-05
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	6e-05
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	7e-05
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	8e-05
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	9e-05
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	1e-04
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	1e-04
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	2e-04
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	2e-04
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	3e-04
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	3e-04

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis} Length = 126

 Score =  111 bits (279), Expect = 1e-31
 Identities = 27/123 (21%), Positives = 47/123 (38%), Gaps = 5/123 (4%)

Query: 93  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 152
            +HHV I   N + +  FY   LG E+       +       L +G++ + +        
Sbjct: 5   EIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQELEIFISDQFPA 64

Query: 153 LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALE 208
               PE  G  RH    +  + ++   L++ GI     +    +G+   F  DPD   LE
Sbjct: 65  RPSYPEALGL-RHLAFKVEHIEEVIAFLNEQGIETEPLRVDDFTGKKMTFFFDPDGLPLE 123

Query: 209 FTQ 211
             +
Sbjct: 124 LHE 126

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str} Length = 126

 Score =  102 bits (255), Expect = 3e-28
 Identities = 26/125 (20%), Positives = 45/125 (36%), Gaps = 13/125 (10%)

Query: 91  VVSVHHVGILC--ENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELP 148
           +  + HV +       E +  FY   +G+E    +P +     G W   G + IH+    
Sbjct: 8   IQGIDHVQVAAPVGCEEEARAFYGETIGMEEIP-KPEELKKRGGCWFKCGNQEIHIGVEQ 66

Query: 149 NPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS--GRPAIFTRDPDANA 206
           N +P         +  H    +  + + K  L K GI      +       +  DP  N 
Sbjct: 67  NFNP--------AKRAHPAFYVLKIDEFKQELIKQGIEVIDDHARPDVIRFYVSDPFGNR 118

Query: 207 LEFTQ 211
           +EF +
Sbjct: 119 IEFME 123

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans} Length = 134

 Score =  100 bits (252), Expect = 1e-27
 Identities = 31/129 (24%), Positives = 44/129 (34%), Gaps = 11/129 (8%)

Query: 94  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLM-------E 146
           VHHV ++  + ++S EFY N LG E+       K       L  G   + +         
Sbjct: 6   VHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDIELEIFGNKLTDSN 65

Query: 147 LPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYT----LSKSGRPAIFTRDP 202
              P      P      RH    + DV   +  L   GI          +G+   F  DP
Sbjct: 66  YCAPPERISWPREACGLRHLAFYVEDVEASRQELIALGIRVEEVRYDDYTGKKMAFFFDP 125

Query: 203 DANALEFTQ 211
           D   LE  +
Sbjct: 126 DGLPLELHE 134

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2 Length = 141

 Score = 94.5 bits (235), Expect = 4e-25
 Identities = 27/122 (22%), Positives = 51/122 (41%), Gaps = 12/122 (9%)

Query: 91  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 150
           + S++H+ +   +L++S+ F+  +LGL ++           GA+L  G   + L      
Sbjct: 2   LQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWNT------GAYLTCGDLWVCLSYDEAR 55

Query: 151 DPLSGRPEHGGRDRHTCIAIR--DVSKLKMILDKAGISY-TLSKSGRPAIFTRDPDANAL 207
                 P       H    +   D   L   L++AG++    +KS   + +  DPD + L
Sbjct: 56  QY---VPPQESDYTHYAFTVAEEDFEPLSQRLEQAGVTIWKQNKSEGASFYFLDPDGHKL 112

Query: 208 EF 209
           E 
Sbjct: 113 EL 114

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A Length = 135

 Score = 89.1 bits (221), Expect = 4e-23
 Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 11/120 (9%)

Query: 91  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 150
           +  ++H+ +   +L  S+ FY+++LG  +      +    +GA+L +G+  + L   P  
Sbjct: 2   LTGLNHLTLAVADLPASIAFYRDLLGFRL------EARWDQGAYLELGSLWLCLSREPQY 55

Query: 151 DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISY-TLSKSGRPAIFTRDPDANALEF 209
               G P          IA  D ++    L   G+     ++S   + +  DPD + LE 
Sbjct: 56  ----GGPAADYTHYAFGIAAADFARFAAQLRAHGVREWKQNRSEGDSFYFLDPDGHRLEA 111

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium} Length = 141

 Score = 87.7 bits (218), Expect = 2e-22
 Identities = 29/124 (23%), Positives = 52/124 (41%), Gaps = 18/124 (14%)

Query: 93  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 152
            +  V +  +NLE+S +FY  ILG E        +  +   W+   A M+ L E      
Sbjct: 28  GLFEVAVKVKNLEKSSQFYTEILGFEAGLLDSARR--WNFLWVSGRAGMVVLQE------ 79

Query: 153 LSGRPEHGGRDRHTCIAI--RDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANA 206
                +   + +H    +   ++  LK  L+  G+S     +       +++  DP+ +A
Sbjct: 80  ----EKENWQQQHFSFRVEKSEIEPLKKALESKGVSVHGPVNQEWMQAVSLYFADPNGHA 135

Query: 207 LEFT 210
           LEFT
Sbjct: 136 LEFT 139

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102} Length = 156

 Score = 86.1 bits (213), Expect = 1e-21
 Identities = 26/130 (20%), Positives = 43/130 (33%), Gaps = 13/130 (10%)

Query: 94  VHHVGILCENLERSLEFYQNILGLEI------NEARPHDKLPYRGAWLWVGAE-MIHLME 146
           VHH+ +  ++++ S  FY  ILGL                   + A        ++ L  
Sbjct: 20  VHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDLFG 79

Query: 147 LPNPDPLSGRPEH-GGRDRHTCIAIRDVSKLKMI--LDKAGISYTLSKSGRP---AIFTR 200
            P   P    PE    R  H    I      + +  + +  I+       RP    ++  
Sbjct: 80  EPELSPPDPNPEKTFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAHGPVTRPTGRGVYFY 139

Query: 201 DPDANALEFT 210
           DPD   +E  
Sbjct: 140 DPDGFMIEIR 149

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP} Length = 136

 Score = 79.0 bits (195), Expect = 3e-19
 Identities = 28/124 (22%), Positives = 44/124 (35%), Gaps = 7/124 (5%)

Query: 91  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 150
           +  V HV +   +L+ S  +Y  IL  +       D   +       G   I L E    
Sbjct: 3   LSGVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGV-LPGGLSIVLREHDGG 61

Query: 151 DPLSGRPEHGGRDRHTCIAIRDVSKLKMI---LDKAGISYT--LSKSGRPAIFTRDPDAN 205
                     G D H   ++  ++ L ++   L KAG ++T          +  RD D  
Sbjct: 62  GTDLFDETRPGLD-HLSFSVESMTDLDVLEERLAKAGAAFTPTQELPFGWILAFRDADNI 120

Query: 206 ALEF 209
           ALE 
Sbjct: 121 ALEA 124

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens} Length = 160

 Score = 79.1 bits (195), Expect = 7e-19
 Identities = 28/131 (21%), Positives = 55/131 (41%), Gaps = 15/131 (11%)

Query: 91  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN- 149
             ++    +  ++L+ +  FY+++ GLE        KLP +  +   G +M+ L +    
Sbjct: 6   PSAIMETALYADDLDAAEAFYRDVFGLE-----MVLKLPGQLVFFKCGRQMLLLFDPQES 60

Query: 150 --PDPLSGRPEHGGRDR-HTCIAIR---DVSKLKMILDKAGI---SYTLSKSGRPAIFTR 200
              D  +  P HG   + H C       +V + K   +   I    Y    +G  +++ R
Sbjct: 61  SRADANNPIPRHGAVGQGHFCFYADDKAEVDEWKTRFEALEIPVEHYHRWPNGSYSVYIR 120

Query: 201 DPDANALEFTQ 211
           DP  N++E  +
Sbjct: 121 DPAGNSVEVGE 131

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} Length = 134

 Score = 74.8 bits (184), Expect = 1e-17
 Identities = 32/128 (25%), Positives = 56/128 (43%), Gaps = 10/128 (7%)

Query: 94  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP- 152
           ++HV I   +LE++  FY+NILG +++EA P  +      ++ +G   + L+     D  
Sbjct: 6   LNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNTKMELLHPLGLDSP 65

Query: 153 --LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYT-----LSKSGRPAIF--TRDPD 203
                +    G   H CI + +++   M L K  I        +   G+P IF   +D  
Sbjct: 66  IAGFLQKNKAGGMHHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPKDCG 125

Query: 204 ANALEFTQ 211
              +E  Q
Sbjct: 126 GVLVELEQ 133

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2 Length = 139

 Score = 74.9 bits (184), Expect = 2e-17
 Identities = 17/124 (13%), Positives = 38/124 (30%), Gaps = 11/124 (8%)

Query: 91  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLP-YRGAWLWVGAEMIHLMELPN 149
           +  + H+  +  +LER     + +       A   ++    R  +  +G   + +M+   
Sbjct: 2   IEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGDIWVAIMQGEK 61

Query: 150 PDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDAN 205
                   E         I   D  +    + K G+     +        +I+  D D +
Sbjct: 62  L------AERSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSIYFYDDDNH 115

Query: 206 ALEF 209
             E 
Sbjct: 116 MFEL 119

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygenase, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A Length = 152

 Score = 73.9 bits (181), Expect = 6e-17
 Identities = 25/128 (19%), Positives = 49/128 (38%), Gaps = 13/128 (10%)

Query: 91  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 150
           +  + H+ +   ++  ++ FY+ +LG      + +         L  GA+ I+L +    
Sbjct: 21  IDRIDHLVLTVSDISTTIRFYEEVLGFSAVTFKQNR------KALIFGAQKINLHQQEME 74

Query: 151 DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-------AIFTRDPD 203
                     G      I    ++ +   + +AGIS       R        +I+ RDPD
Sbjct: 75  FEPKASRPTPGSADLCFITSTPINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPD 134

Query: 204 ANALEFTQ 211
            N +E +Q
Sbjct: 135 GNLIEISQ 142

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A Length = 133

 Score = 72.9 bits (179), Expect = 8e-17
 Identities = 22/125 (17%), Positives = 49/125 (39%), Gaps = 7/125 (5%)

Query: 94  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPD-P 152
           VHH+G   +N++ +L+ ++ +  +E +E    +       ++  G   + L+     D P
Sbjct: 8   VHHIGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVINGGYRVELVAPDGEDSP 67

Query: 153 LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGIS------YTLSKSGRPAIFTRDPDANA 206
           ++   + G    H C  + D+ K    + + G +         +   R   F    D   
Sbjct: 68  INKTIKKGSTPYHICYEVEDIQKSIEEMSQIGYTLFKKAEIAPAIDNRKVAFLFSTDIGL 127

Query: 207 LEFTQ 211
           +E  +
Sbjct: 128 IELLE 132

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A Length = 133

 Score = 71.8 bits (176), Expect = 2e-16
 Identities = 18/124 (14%), Positives = 41/124 (33%), Gaps = 11/124 (8%)

Query: 91  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLP-YRGAWLWVGAEMIHLMELPN 149
           +  + H+ ++ ++L ++  F QNI   E   +         +  +  +    I +ME  +
Sbjct: 2   ISGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSGDKTFSLSKEKFFLIAGLWICIMEGDS 61

Query: 150 PDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDAN 205
                   E         I   +V +    +   G+     +        +I+  D D +
Sbjct: 62  L------QERTYNHIAFQIQSEEVDEYTERIKALGVEMKPERPRVQGEGRSIYFYDFDNH 115

Query: 206 ALEF 209
             E 
Sbjct: 116 LFEL 119

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str} Length = 127

 Score = 71.1 bits (174), Expect = 3e-16
 Identities = 22/125 (17%), Positives = 43/125 (34%), Gaps = 10/125 (8%)

Query: 94  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE-MIHLMELPNPDP 152
           + HV +   NLE+  +FY    G   N+   +    +   +L       + +M   +   
Sbjct: 4   IEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFEDGARLEIMSRTDVTG 63

Query: 153 LSGRPEHGGRDRHTCIAIRDVSKLKMI---LDKAGISYT----LSKSGRPAIFTRDPDAN 205
            +     G    H  I+      +  +   L + G +      ++  G       DP+ N
Sbjct: 64  KTTGENLGW--AHIAISTGTKEAVDELTEKLRQDGFAIAGEPRMTGDGYYESVVLDPEGN 121

Query: 206 ALEFT 210
            +E T
Sbjct: 122 RIEIT 126

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A* Length = 133

 Score = 70.0 bits (171), Expect = 1e-15
 Identities = 22/126 (17%), Positives = 45/126 (35%), Gaps = 13/126 (10%)

Query: 91  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 150
           +  + H+ +   ++  +  FY+ +LG++                L  G + I+L +L N 
Sbjct: 8   ISHLDHLVLTVADIPTTTNFYEKVLGMKAVSFGAG------RIALEFGHQKINLHQLGNE 61

Query: 151 DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGR-------PAIFTRDPD 203
                +    G      I    +S     ++  G++       R        + + RDPD
Sbjct: 62  FEPKAQNVRVGSADLCFITDTVLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPD 121

Query: 204 ANALEF 209
            N +E 
Sbjct: 122 GNLIEV 127

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans} Length = 161

 Score = 66.4 bits (162), Expect = 4e-14
 Identities = 23/127 (18%), Positives = 45/127 (35%), Gaps = 9/127 (7%)

Query: 94  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPD-- 151
           + H+GI   +++  L FY   L L++           + A+L +G   I L+E  + +  
Sbjct: 9   LDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGESKIELLEPLSEESP 68

Query: 152 PLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISY-----TLSKSGRPAIF--TRDPDA 204
                 + G    H  I ++ + +    + + G+            G    F   R    
Sbjct: 69  IAKFIQKRGEGIHHIAIGVKSIEERIQEVKENGVQMINDEPVPGARGAQVAFLHPRSARG 128

Query: 205 NALEFTQ 211
              EF +
Sbjct: 129 VLYEFCE 135

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125} Length = 146

 Score = 65.7 bits (160), Expect = 5e-14
 Identities = 24/126 (19%), Positives = 39/126 (30%), Gaps = 13/126 (10%)

Query: 94  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 153
           +HHV I  ++LE S+ F+  +LG    E         RG     G   +  ++  +    
Sbjct: 21  LHHVEINVDHLEESIAFWDWLLGELGYE-DYQS--WSRGKSYKHGKTYLVFVQTEDRFQT 77

Query: 154 SGRPEHGGRDRHTCIAIRD---VSKLKMILDKAGISYTLSKSGRP-------AIFTRDPD 203
                      H          V +L   L + G                  A+F  DP+
Sbjct: 78  PTFHRKRTGLNHLAFHAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHYAVFCEDPN 137

Query: 204 ANALEF 209
              +E 
Sbjct: 138 RIKVEI 143

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6 Length = 153

 Score = 64.9 bits (158), Expect = 1e-13
 Identities = 18/142 (12%), Positives = 47/142 (33%), Gaps = 23/142 (16%)

Query: 91  VVSVHHVGILCENLERSLEFYQNILGLEI-----NEARPHDKLP------YRGAWLWV-- 137
           ++ + +V I+ E+L+ ++ F++  +GL +      E     ++          A +    
Sbjct: 9   LLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPD 67

Query: 138 GAEMIHLMELPNPDPLSGRPEHGGRD---RHTCIAIRDVSKLKMILDKAGISYTLSKSGR 194
           G   I L     P  ++                  + D+ ++   L K G    + +  +
Sbjct: 68  GHSRIELSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAE-LVGEVVQ 126

Query: 195 P-----AIFTRDPDANALEFTQ 211
                   + R  +   +   +
Sbjct: 127 YENSYRLCYIRGVEGILIGLAE 148

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens} Length = 147

 Score = 64.7 bits (157), Expect = 1e-13
 Identities = 22/124 (17%), Positives = 43/124 (34%), Gaps = 13/124 (10%)

Query: 93  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 152
            + H+ +  ++++ +  FY  ILG+E+   +           L  G +  +L E+     
Sbjct: 27  RLDHIVMTVKSIKDTTMFYSKILGMEVMTFKEDR------KALCFGDQKFNLHEVGKEFE 80

Query: 153 LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-------AIFTRDPDAN 205
                   G      I    + ++   L    +        R        +I+ RDPD N
Sbjct: 81  PKAAHPVPGSLDICLITEVPLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDRN 140

Query: 206 ALEF 209
            +E 
Sbjct: 141 LIEV 144

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus} Length = 145

 Score = 60.8 bits (147), Expect = 3e-12
 Identities = 23/129 (17%), Positives = 46/129 (35%), Gaps = 21/129 (16%)

Query: 99  ILCENLERSLEFYQNILGLEINEARPHDKLPYR---GAWLWVGAEMIHLMELPNPDPLSG 155
           + C ++  S  F+ ++LG E+   RP ++  Y    G  +     M+  +   +   LSG
Sbjct: 11  LYCFDINVSQSFFVDVLGFEVKYERPDEEFVYLTLDGVDV-----MLEGIAGKSRKWLSG 65

Query: 156 RPEHG-GRDRHTCIAIRDVSKLKMILDKAGISYTL------------SKSGRPAIFTRDP 202
             E   G   +    + D+  L   ++++                  S + +     + P
Sbjct: 66  DLEFPLGSGVNFQWDVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTP 125

Query: 203 DANALEFTQ 211
           D     F Q
Sbjct: 126 DGYLFRFCQ 134

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp} Length = 335

 Score = 62.8 bits (152), Expect = 6e-12
 Identities = 24/127 (18%), Positives = 45/127 (35%), Gaps = 9/127 (7%)

Query: 94  VHHVGILCENLERSLEFYQNILGLEI-----NEARPHDKLPYRGAWLWVGAEMIHLMELP 148
           +HH+  +  + + + +FY  +LGL +     N   P     Y G     G     +   P
Sbjct: 9   IHHITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYFGN--EGGKPGTIITFFP 66

Query: 149 NPDPLSGRPEHGGRDRHT-CIAIRDVSKLKMILDKAGISYTLSKS-GRPAIFTRDPDANA 206
                 G    G     +  +    ++  +  L+K  + YT  +  G   +   DP    
Sbjct: 67  WAGARQGVIGDGQVGVTSYVVPKGAMAFWEKRLEKFNVPYTKIERFGEQYVEFDDPHGLH 126

Query: 207 LEFTQVD 213
           LE  + +
Sbjct: 127 LEIVERE 133

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp} Length = 335

 Score = 43.9 bits (103), Expect = 1e-05
 Identities = 21/122 (17%), Positives = 31/122 (25%), Gaps = 14/122 (11%)

Query: 94  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 153
                +L E  +++ +  +NI+GLE                      +I L   P     
Sbjct: 154 FGGATLLSEQPDKTADLLENIMGLERVGKEGDFVRYRSAGD---IGNVIDLKLTPIGRGQ 210

Query: 154 SGRPEHGGRDRHTCIAIRDVSKLKMILDK---AGISYTLSKSGR---PAIFTRDPDANAL 207
            G     G   H      D              G   T     R    AI+ R+      
Sbjct: 211 MGA----GTVHHIAWRANDDEDQLDWQRYIASHGYGVT-PVRDRNYFNAIYFREHGEILF 265

Query: 208 EF 209
           E 
Sbjct: 266 EI 267

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10 Length = 338

 Score = 61.6 bits (149), Expect = 2e-11
 Identities = 21/129 (16%), Positives = 43/129 (33%), Gaps = 11/129 (8%)

Query: 94  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMEL----PN 149
            HH+ ++ +N   +  FY+N+LGL   +   +   P     L+ G +             
Sbjct: 31  HHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPS-MYHLFYGDKTGSPGTELSFFEI 89

Query: 150 PDPLSGRPEHGGRDRHTCIAIRDVSKL---KMILDKAGISYT--LSKSGRPAIFTRDPDA 204
           P                 + +     L   K   +K  + ++   + + RPA+   D + 
Sbjct: 90  PLVGRTYRGTNA-ITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANRPALQFEDAEG 148

Query: 205 NALEFTQVD 213
             L     +
Sbjct: 149 LRLVLLVSN 157

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10 Length = 338

 Score = 43.1 bits (101), Expect = 3e-05
 Identities = 15/123 (12%), Positives = 40/123 (32%), Gaps = 13/123 (10%)

Query: 94  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 153
           +  V +    L++       I G          +      +  +  E    + +   D  
Sbjct: 181 MGSVELTVRRLDKMASTLTEIFGY-----TEVSRNDQEAIFQSIKGEAFGEIVVKYLDGP 235

Query: 154 SGRPEHGGRDRHTCIAIRDVSKL---KMILDKAGISYTLSKSGR---PAIFTRDPDANAL 207
           + +P  G    H  I +++ ++L   +  + + G   +     R    +++ R+ +    
Sbjct: 236 TEKPGRGS-IHHLAIRVKNDAELAYWEEQVKQRGFHSS-GIIDRFYFKSLYFRESNGILF 293

Query: 208 EFT 210
           E  
Sbjct: 294 EIA 296

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str} Length = 141

 Score = 57.6 bits (139), Expect = 5e-11
 Identities = 23/121 (19%), Positives = 42/121 (34%), Gaps = 8/121 (6%)

Query: 95  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS 154
            +      ++ RS  FY++ LGL+I E      L   G  +  G  +   +   + D   
Sbjct: 10  VNPIPFVRDINRSKSFYRDRLGLKILEDFGSFVLFETGFAIHEGRSLEETIWRTSSDA-- 67

Query: 155 GRPEHGGRDRHTCIAIRDVSKLKMILDKAGISY----TLSKSGRPAIFTRDPDANALEFT 210
            +  +G R+        DV      +    +           G+      DPD +A+E  
Sbjct: 68  -QEAYGRRNMLLYFEHADVDAAFQDI-APHVELIHPLERQAWGQRVFRFYDPDGHAIEVG 125

Query: 211 Q 211
           +
Sbjct: 126 E 126

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans} Length = 141

 Score = 57.2 bits (138), Expect = 7e-11
 Identities = 23/129 (17%), Positives = 36/129 (27%), Gaps = 11/129 (8%)

Query: 93  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLP-YRGAWLWVG---AEMIHLMELP 148
            + +V I   ++     FYQ + G +  E+               +G    E   LM+L 
Sbjct: 8   DLSYVNIFTRDIVAMSAFYQQVFGFQEIESIRSPIFRGLDTGKSCIGFNAHEAYELMQLA 67

Query: 149 NPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDA 204
                SG                 V KL  +   AG +   +              DP+ 
Sbjct: 68  QFSETSGIKFLLN---FDVDTKEAVDKLVPVAIAAGATLIKAPYETYYHWYQAVLLDPER 124

Query: 205 NALEFTQVD 213
           N      V 
Sbjct: 125 NVFRINNVL 133

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2 Length = 113

 Score = 55.9 bits (135), Expect = 9e-11
 Identities = 14/118 (11%), Positives = 33/118 (27%), Gaps = 16/118 (13%)

Query: 95  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS 154
            H+ +   ++  + EF +   GL  +            A+  +      ++ L     + 
Sbjct: 5   KHLNLTVADVVAAREFLEKYFGLTCSGT-------RGNAFAVMRDNDGFILTL-----MK 52

Query: 155 GRPEHGGRDRHTCIAIRDVSKLKMILDK---AGISYTLSKSGRP-AIFTRDPDANALE 208
           G+     +  H         ++  I  +    G      K       +   P    +E
Sbjct: 53  GKEVQYPKTFHVGFPQESEEQVDKINQRLKEDGFLVEPPKHAHAYTFYVEAPGGFTIE 110

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A* Length = 252

 Score = 58.5 bits (141), Expect = 1e-10
 Identities = 26/150 (17%), Positives = 44/150 (29%), Gaps = 25/150 (16%)

Query: 70  SDKIETATNGKHNIKEIRDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLP 129
           SDKI    +            + S+  + +    L+R L FY N+LG +    +      
Sbjct: 3   SDKIHHHHHHSSGENLYFQGHMTSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQA----- 57

Query: 130 YRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI--RDVSKLKMILDKAGISY 187
                + +G   I           +          H  I I      + K  L   G   
Sbjct: 58  -DAFTIQLGVSQIQFRA-------AADGTKPF--YHIAINIAANHFQEGKAWLSGFGELL 107

Query: 188 TLSKSGRP--------AIFTRDPDANALEF 209
           T +   +         + +  DP  N +E 
Sbjct: 108 TENDEDQAYFPFFNAYSCYVEDPSGNIIEL 137

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp} Length = 135

 Score = 55.1 bits (132), Expect = 4e-10
 Identities = 25/125 (20%), Positives = 41/125 (32%), Gaps = 16/125 (12%)

Query: 93  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 152
            V H+ I   +L+ + +FY   LG ++    P           +    + HL +  + + 
Sbjct: 9   DVFHLAIPARDLDEAYDFYVTKLGCKLARRYPD----RITLDFFGDQLVCHLSDRWDREV 64

Query: 153 LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGR--------PAIFTRDPDA 204
                  G     T    +    L  +  + GI +    S R           F  DP  
Sbjct: 65  SMYPRHFG----ITFRDKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLIDPSN 120

Query: 205 NALEF 209
           N LEF
Sbjct: 121 NLLEF 125

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100} Length = 128

 Score = 54.6 bits (131), Expect = 5e-10
 Identities = 26/128 (20%), Positives = 47/128 (36%), Gaps = 15/128 (11%)

Query: 92  VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPD 151
           + +  + I   +L+  L FY+ I+G +   A   DK                L  + NP 
Sbjct: 5   LLITSITINTSHLQGMLGFYR-IIGFQF-TASKVDKGSEVHR-AVHNGVEFSLYSIQNPQ 61

Query: 152 PLSGRPEHGGRDRHTCIAIRDVSK-LKMILDKAGISYTL----SKSGRPAIFTRDPDANA 206
                             I D+ K ++ ++   G    L       G+ AI   DPD ++
Sbjct: 62  R------SQIPSLQLGFQITDLEKTVQELVKIPGAMCILDPTDMPDGKKAIV-LDPDGHS 114

Query: 207 LEFTQVDG 214
           +E  +++G
Sbjct: 115 IELCELEG 122

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila} Length = 155

 Score = 54.7 bits (131), Expect = 7e-10
 Identities = 18/126 (14%), Positives = 37/126 (29%), Gaps = 8/126 (6%)

Query: 94  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 153
           +H   +  ++  ++  FY   LG  +    P     +         +   L+  P+    
Sbjct: 27  IHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGADRWLTVVSPEAPDGTQLLLEPSSHAA 86

Query: 154 SG---RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTL----SKSGRPAIFTRDPDANA 206
                             A+ D++     L   G+ +T           AI   D   N 
Sbjct: 87  VTPFKEALVADGIPAASFAVDDIAAEYERLSALGVRFTQEPTDMGPVVTAIL-DDTCGNL 145

Query: 207 LEFTQV 212
           ++  Q+
Sbjct: 146 IQLMQI 151

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei} Length = 144

 Score = 52.1 bits (125), Expect = 5e-09
 Identities = 20/122 (16%), Positives = 41/122 (33%), Gaps = 19/122 (15%)

Query: 96  HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG 155
              +   +L  +LEFY+ +L   +  A   +          +   ++          ++G
Sbjct: 9   LSRLYVADLNPALEFYEELLETPV--AMRFEIPQTGVELAQISTILL----------IAG 56

Query: 156 RPEHGGRDRHTCIAIR--DVSKLKMILDKAGISYTL----SKSGRPAIFTRDPDANALEF 209
             E     R+T        + K K  L++ G           +GR     R  D + +E+
Sbjct: 57  SEEALKPFRNTQATFLVDSLDKFKTFLEENGAEIIRGPSKVPTGRNMTV-RHSDGSVIEY 115

Query: 210 TQ 211
            +
Sbjct: 116 VE 117

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis} Length = 159

 Score = 51.4 bits (123), Expect = 1e-08
 Identities = 21/142 (14%), Positives = 45/142 (31%), Gaps = 20/142 (14%)

Query: 90  GVVSVHHVGILCENLERSLEFYQNILGLE-----INEARPHDKLPYRG---------AWL 135
            + +   +GI+  ++E SL+ Y    G+E       +        + G         A+ 
Sbjct: 16  DMRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFF 75

Query: 136 WVGAEMIHLMELPNPD-PLSGRPEHGGRD-RHTCIAIRDVSKLKMILDKAGIS--YTLSK 191
            +G   + L+E            +  G    H    ++D+ +    L + G+        
Sbjct: 76  ELGPLQLELIEPDENPSTWREFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQKGDF 135

Query: 192 SGRPAIF--TRDPDANALEFTQ 211
            G    +  T       +E  +
Sbjct: 136 EGGRYAYIDTLRALKVMIELLE 157

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} Length = 134

 Score = 50.2 bits (120), Expect = 2e-08
 Identities = 23/121 (19%), Positives = 41/121 (33%), Gaps = 18/121 (14%)

Query: 99  ILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPE 158
           +   +++ +L  + + LG E+     +       A+L +    + L+E P          
Sbjct: 13  LHIPDMQEALTLFCDTLGFELKYRHSNY------AYLELSGCGLRLLEEPARKI----IP 62

Query: 159 HGGRDRHTCIAIRDV----SKLKMILDKAGISYTLSKSGRP----AIFTRDPDANALEFT 210
            G      CI + D+    +KL   L+             P        R PD + L FT
Sbjct: 63  DGIARVAICIDVSDIDSLHTKLSPALENLPADQVEPLKNMPYGQREFQVRMPDGDWLNFT 122

Query: 211 Q 211
            
Sbjct: 123 A 123

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi} Length = 150

 Score = 50.0 bits (119), Expect = 3e-08
 Identities = 21/125 (16%), Positives = 33/125 (26%), Gaps = 14/125 (11%)

Query: 93  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 152
            V  + +   +LE S  FY    G       P         +  +   ++    + N   
Sbjct: 5   QVAVITLGIGDLEASARFYGEGFGWAPVFRNPE------IIFYQMNGFVLATWLVQNLQE 58

Query: 153 LSGRPEHGGRDRHT----CIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDA 204
             G                 A  +V+ L   L  AG          P      +  DPD 
Sbjct: 59  DVGVAVTSRPGSMALAHNVRAETEVAPLMERLVAAGGQLLRPADAPPHGGLRGYVADPDG 118

Query: 205 NALEF 209
           +  E 
Sbjct: 119 HIWEI 123

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2 Length = 118

 Score = 49.4 bits (118), Expect = 3e-08
 Identities = 18/121 (14%), Positives = 42/121 (34%), Gaps = 15/121 (12%)

Query: 96  HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG 155
            + I+  N+ +     ++IL  + + A          A   +G+  + L +         
Sbjct: 8   QLDIIVSNVPQVCADLEHILDKKADYANDG------FAQFTIGSHCLMLSQNH-----LV 56

Query: 156 RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANALEFTQ 211
             E+        I + DV +    L++ GI      +       ++  + P    L+F +
Sbjct: 57  PLENFQSGIIIHIEVEDVDQNYKRLNELGIKVLHGPTVTDWGTESLLVQGPAGLVLDFYR 116

Query: 212 V 212
           +
Sbjct: 117 M 117

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1 Length = 144

 Score = 48.9 bits (117), Expect = 6e-08
 Identities = 27/115 (23%), Positives = 45/115 (39%), Gaps = 14/115 (12%)

Query: 96  HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE------MIHLMELPN 149
           H  I   +L+RS++FY   LG++    R  D    +   +++G        ++ L     
Sbjct: 11  HTMIRVGDLDRSIKFYTERLGMK--VLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYG 68

Query: 150 PDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTL-SKSGRPAIFTRDPD 203
                   +H     H  I + DV +L   + K  +      +SG  A F  DPD
Sbjct: 69  VTS----YKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDESGFMA-FVVDPD 118

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens} Length = 144

 Score = 48.9 bits (116), Expect = 7e-08
 Identities = 17/126 (13%), Positives = 41/126 (32%), Gaps = 14/126 (11%)

Query: 95  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS 154
               +  +N   S +FY+ +LG++  E+ P         ++      + L      +P  
Sbjct: 27  DFTILYVDNPPASTQFYKALLGVDPVESSPT-----FSLFVLANGMKLGLWSRHTVEP-- 79

Query: 155 GRPEHGGRDRHTCIAIRDVSKLKMI---LDKAGISYTLSKSGRP---AIFTRDPDANALE 208
            +    G        + + +++         +G++     +           DPD++ L 
Sbjct: 80  -KASVTGGGGELAFRVENDAQVDETFAGWKASGVAMLQQPAKMEFGYTFTAADPDSHRLR 138

Query: 209 FTQVDG 214
                G
Sbjct: 139 VYAFAG 144

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3 Length = 307

 Score = 50.6 bits (121), Expect = 7e-08
 Identities = 18/132 (13%), Positives = 40/132 (30%), Gaps = 24/132 (18%)

Query: 88  DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMEL 147
           + GV+   HV +   ++ ++LE Y  +LGL   +     ++  +                
Sbjct: 2   NKGVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQGRVYLKA--------------W 47

Query: 148 PNPDPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYTLSKSG-----RPAI 197
              D  S             +  +      + +L+  L   G +     +G        +
Sbjct: 48  TEVDKFSLVLREADEPGMDFMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRV 107

Query: 198 FTRDPDANALEF 209
             + P  +  E 
Sbjct: 108 RFQAPSGHHFEL 119

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3 Length = 307

 Score = 46.4 bits (110), Expect = 2e-06
 Identities = 19/145 (13%), Positives = 43/145 (29%), Gaps = 22/145 (15%)

Query: 77  TNGKHNIKEIRDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLW 136
            N +   ++++    V   H  +  + L  + + +  +LG  + E    +       +L 
Sbjct: 134 VNPEAWPRDLKGMAAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLS 193

Query: 137 VGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA---IRDVSKLKMILDKAG--ISYTLSK 191
           +  +   +  + +P+         GR  H         D+ +   ++      I      
Sbjct: 194 LSTKAHDVAFIHHPEK--------GRLHHVSFHLETWEDLLRAADLISMTDTSIDIGP-- 243

Query: 192 SGR----PAIFT--RDPDANALEFT 210
             R            DP  N  E  
Sbjct: 244 -TRHGLTHGKTIYFFDPSGNRNEVF 267

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans} Length = 148

 Score = 48.5 bits (115), Expect = 9e-08
 Identities = 18/138 (13%), Positives = 44/138 (31%), Gaps = 11/138 (7%)

Query: 82  NIKEIRDYGVVSVHHVGIL-CENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA- 139
            +    + G V   +  +   +++++++++++ ILG   +     D+       ++    
Sbjct: 9   KMSRFSERGYVVRENGPVYFTKDMDKTVKWFEEILGWSGDIVARDDEGFGDYGCVFDYPS 68

Query: 140 --EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-- 195
              + HL          G P  G       + I  +  L   + + G         +P  
Sbjct: 69  EVAVAHLTPFRGFHLFKGEPIKGV---AGFMMIEGIDALHKYVKENGWDQISDIYTQPWG 125

Query: 196 --AIFTRDPDANALEFTQ 211
                    D   L F +
Sbjct: 126 ARECSITTTDGCILRFFE 143

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* Length = 184

 Score = 48.9 bits (116), Expect = 1e-07
 Identities = 23/136 (16%), Positives = 46/136 (33%), Gaps = 27/136 (19%)

Query: 95  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPY-------------------RGAWL 135
               +  ++ ++SL+FY  +LGL + +      + +                   + AW 
Sbjct: 33  QQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWT 92

Query: 136 WVGAEMIHLMELPNPDPLSGRPEHGGRD-----RHTCIAIRDVSKLKMILDKAGISYT-L 189
           +     + L      +    +  H G        H  IA+ DV       ++ G+ +   
Sbjct: 93  FSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKK 152

Query: 190 SKSGRPAI--FTRDPD 203
              G+     F +DPD
Sbjct: 153 PDDGKMKGLAFIQDPD 168

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A Length = 135

 Score = 46.6 bits (111), Expect = 4e-07
 Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 17/119 (14%)

Query: 96  HVGILCENLERSLEFYQNILGLEINEARPHD------KLPYRGAWLWVGAEMIHLMELPN 149
           H  +   +L+RS++FY  +LG++    R  +       L + G        +I L     
Sbjct: 5   HTMLRVGDLQRSIDFYTKVLGMK--LLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWG 62

Query: 150 PDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYT----LSKSGRPAI-FTRDPD 203
            D      E G    H  +++ + ++    + + G + T      K G   I F  DPD
Sbjct: 63  VDK----YELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPD 117

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii} Length = 339

 Score = 48.5 bits (115), Expect = 4e-07
 Identities = 18/129 (13%), Positives = 39/129 (30%), Gaps = 23/129 (17%)

Query: 89  YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELP 148
           + +  +    +     + +L+F+   LG+ +   R    +  RG                
Sbjct: 7   FDIAHLARAELFSPKPQETLDFFTKFLGMYVTH-REGQSVYLRG--------------YE 51

Query: 149 NPDPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYTLSKS---GRPAIFTR 200
           +P P S +            A+R      + +    L    +  T S+           +
Sbjct: 52  DPYPWSLKITEAPEAGMGHAAMRTSSPEALERRAKSLTDGNVDGTWSEDQFGYGKTFEYQ 111

Query: 201 DPDANALEF 209
            PD + L+ 
Sbjct: 112 SPDGHNLQL 120

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii} Length = 339

 Score = 43.8 bits (103), Expect = 1e-05
 Identities = 18/132 (13%), Positives = 39/132 (29%), Gaps = 15/132 (11%)

Query: 87  RDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLME 146
           +   V  + H+ ++  ++    + ++  LG    E R  D     GAW+        +  
Sbjct: 147 QGIPVKRIDHLNLMSSDVTAVKDSFERHLGFRTTE-RVVDGNVEIGAWMSSNLLGHEVAC 205

Query: 147 LPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAG--ISYTLSKSGR----PAIFT- 199
           + +     G+  H      T    +       +       I        +     + F  
Sbjct: 206 MRDMTGGHGKLHHLAFFYGT---GQHNIDAVEMFRDYDIQIEAGP---DKHGITQSQFLY 259

Query: 200 -RDPDANALEFT 210
             +P  N +E  
Sbjct: 260 VFEPGGNRIELF 271

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila} Length = 148

 Score = 47.0 bits (111), Expect = 4e-07
 Identities = 20/118 (16%), Positives = 38/118 (32%), Gaps = 8/118 (6%)

Query: 95  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS 154
           + V    +N  +S EFY+N+L  +  E+ P         ++      + L      +P +
Sbjct: 8   NLVLFYVKNPAKSEEFYKNLLDTQPIESSPT-----FAMFVMKTGLRLGLWAQEEIEPKA 62

Query: 155 GRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP---AIFTRDPDANALEF 209
            +   G        +   V ++        IS     +           DPD + L  
Sbjct: 63  HQTGGGMELSFQVNSNEMVDEIHRQWSDKEISIIQPPTQMDFGYTFVGVDPDEHRLRI 120

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A Length = 148

 Score = 45.4 bits (107), Expect = 2e-06
 Identities = 18/138 (13%), Positives = 40/138 (28%), Gaps = 17/138 (12%)

Query: 91  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV------GAEMIHL 144
            + + HV   C + + + ++YQ   G        + +       +            + +
Sbjct: 7   FICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQV 66

Query: 145 MELPNPD-PLSGRPEHGGRDR---HTCIAIRDVSKLKMILDKAGISY-----TLSKSGRP 195
           M   N +  ++             H    + D+  +   L + G+        L   G  
Sbjct: 67  MAPLNDESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNR 126

Query: 196 AIF--TRDPDANALEFTQ 211
             F   +      +E TQ
Sbjct: 127 INFMHPKSGKGVLIELTQ 144

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A Length = 323

 Score = 46.1 bits (109), Expect = 2e-06
 Identities = 23/129 (17%), Positives = 41/129 (31%), Gaps = 25/129 (19%)

Query: 91  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 150
           +V   ++ I+  +L +S EFY ++LGL + E    + +  R               L   
Sbjct: 15  IVRCAYMEIVVTDLAKSREFYVDVLGLHVTE-EDENTIYLRS--------------LEEF 59

Query: 151 DPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYT-----LSKSGRPAIFTR 200
              +     G        A R     +V   +    + G          +K    ++   
Sbjct: 60  IHHNLVLRQGPIAAVAAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVE 119

Query: 201 DPDANALEF 209
           DP     EF
Sbjct: 120 DPLGFPYEF 128

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2 Length = 119

 Score = 44.0 bits (104), Expect = 3e-06
 Identities = 20/124 (16%), Positives = 33/124 (26%), Gaps = 16/124 (12%)

Query: 92  VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPD 151
           V      I      R+  FY +ILG+ +  A  H              E    +      
Sbjct: 6   VRRVVANIATPEPARAQAFYGDILGMPV--AMDHG----WIVTHASPLEAHAQVSFAREG 59

Query: 152 PLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANAL 207
                   G       I + +  ++   + KAG+               +F RDP    +
Sbjct: 60  G------SGTDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAWGVQRLFLRDPFGKLI 113

Query: 208 EFTQ 211
               
Sbjct: 114 NILS 117

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A* Length = 138

 Score = 43.7 bits (103), Expect = 4e-06
 Identities = 25/122 (20%), Positives = 45/122 (36%), Gaps = 9/122 (7%)

Query: 95  HHVGILCENLERSLEFYQNILGLEI---NEARPHDKLPYRGAWLWVGAEMIHLMELPNPD 151
               ++ E++ +SLEFY+  LG+EI    ++ PH +    G    +  + +  +   +P+
Sbjct: 6   SLFAVVVEDMAKSLEFYRK-LGVEIPAEADSAPHTEAVLDGGIR-LAWDTVETVRSYDPE 63

Query: 152 PLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANAL 207
             +    H             V K    L  AG    L              +DPD N +
Sbjct: 64  WQAPTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRYAIVKDPDGNVV 123

Query: 208 EF 209
           + 
Sbjct: 124 DL 125

>3eck_A Protein (homoprotocatechuate 2,3-dioxygenase); oxidoreductase, extradiol, FEII, crystal packing; HET: XXG; 1.60A {Brevibacterium fuscum} SCOP: d.32.1.3 d.32.1.3 PDB: 3ecj_A* 3ojn_A* 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* Length = 365

 Score = 45.4 bits (107), Expect = 4e-06
 Identities = 22/129 (17%), Positives = 41/129 (31%), Gaps = 25/129 (19%)

Query: 91  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 150
           ++   +  ++  +L +S  FY ++LGL ++     +++  R                   
Sbjct: 15  ILRCAYAELVVTDLAKSRNFYVDVLGLHVSY-EDENQIYLRSFE--------------EF 59

Query: 151 DPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYTLSKSG-----RPAIFTR 200
              +     G       +A R     DV K +    + G      K G       A+   
Sbjct: 60  IHHNLVLTKGPVAALKAMAFRVRTPEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRVE 119

Query: 201 DPDANALEF 209
           DP     EF
Sbjct: 120 DPLGFPYEF 128

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A* Length = 309

 Score = 45.2 bits (107), Expect = 5e-06
 Identities = 21/130 (16%), Positives = 39/130 (30%), Gaps = 24/130 (18%)

Query: 90  GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 149
           GV+   H  +   NLE  + FY+N+LGL         ++ ++              +   
Sbjct: 5   GVLRPGHAQVRVLNLEEGIHFYRNVLGLVETGRDDQGRVYFKC------------WD--E 50

Query: 150 PDPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYTLSKSGRP-----AIFT 199
            D                   +      + KL   L   G++ T   +G        +  
Sbjct: 51  RDHSCYIIREADTAGIDFFGFKVLDKATLEKLDADLQAYGLTTTRIPAGEMLETGERVRF 110

Query: 200 RDPDANALEF 209
             P  + +E 
Sbjct: 111 ELPSGHLIEL 120

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A* Length = 309

 Score = 40.2 bits (94), Expect = 2e-04
 Identities = 22/157 (14%), Positives = 41/157 (26%), Gaps = 23/157 (14%)

Query: 65  EPIRDSDKIETATNGKHNIKEIRDYGVVSVHHVGILCENLERSLEFYQNILGLEINEA-R 123
           E     + I        N +       + + H  +   N+    + +  +LG  + E   
Sbjct: 123 EKTCVGNGISEVNPAPWNAQREHGIAPIQLDHCLLYGPNIAEVQKIFTEVLGFYLVERVL 182

Query: 124 PHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA---IRDVSKLKMIL 180
             D     G WL    ++  +  +  P+         G+  H          V +   I+
Sbjct: 183 SPDGDSDMGIWLSCSHKVHDIAFVEYPEK--------GKLHHCSFLLESWEQVLRAGDIM 234

Query: 181 DKAG--ISYTLSKSGR----PAIFT--RDPDANALEF 209
                 +        R            DP  N  E 
Sbjct: 235 SMNEVNVDIGP---TRHGVTRGCTIYAWDPSGNRFET 268

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A Length = 124

 Score = 42.6 bits (100), Expect = 9e-06
 Identities = 15/122 (12%), Positives = 34/122 (27%), Gaps = 25/122 (20%)

Query: 101 CENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHG 160
             ++  ++EF+ + LG         D      A +      + +  + +           
Sbjct: 13  ARDVAEAVEFWTDRLGFSR--VFVEDDF----AGVVRDDVTLFISAVQDQVV-------- 58

Query: 161 GRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-----------AIFTRDPDANALEF 209
             +    + +R + +L     +   +     SG                 RDP  N + F
Sbjct: 59  PDNTQAWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWGREFALRDPAGNCVHF 118

Query: 210 TQ 211
             
Sbjct: 119 VA 120

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans} Length = 310

 Score = 42.9 bits (101), Expect = 3e-05
 Identities = 21/130 (16%), Positives = 39/130 (30%), Gaps = 24/130 (18%)

Query: 90  GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 149
            V  + +VG   ++ +    FY ++ GLE       +   ++                  
Sbjct: 5   RVTEIRYVGYGVKDFDAEKAFYADVWGLEPVG-EDANNAWFKAQG--------------A 49

Query: 150 PDPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYTLSKSGRPAIFTRDPDA 204
            +    +      +R   IA+      DV  L+  ++ AG          PA+       
Sbjct: 50  DEHHVVQLRRADENRIDVIALAADSRSDVDALRASVEAAGCKVA----SEPAVLATPGGG 105

Query: 205 NALEFTQVDG 214
               F   DG
Sbjct: 106 YGFRFFSPDG 115

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A Length = 305

 Score = 41.9 bits (98), Expect = 6e-05
 Identities = 21/132 (15%), Positives = 42/132 (31%), Gaps = 28/132 (21%)

Query: 90  GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 149
            V  + ++G+   NL+   ++   I+G+++ +    D++ Y                   
Sbjct: 3   KVTELGYLGLSVSNLDAWRDYAAGIMGMQVVDDGEDDRI-YLRMD--------------- 46

Query: 150 PDPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYTLSKSG-------RPAI 197
                      G D    I  R     ++ +L   L  AGI + ++             +
Sbjct: 47  RWHHRIVLHADGSDDLAYIGWRVAGPVELDELAEQLKNAGIPFEVASDADAAERRVLGLV 106

Query: 198 FTRDPDANALEF 209
              DP  N  E 
Sbjct: 107 KLHDPGGNPTEI 118

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A Length = 122

 Score = 40.2 bits (94), Expect = 7e-05
 Identities = 21/123 (17%), Positives = 42/123 (34%), Gaps = 27/123 (21%)

Query: 101 CENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHG 160
             ++  ++ F+ + LG E  +    D   +  A +  G   +H+    +        ++ 
Sbjct: 13  AVDVPANVSFWVDTLGFEK-DFGDRD---F--AGVRRGDIRLHISRTEHQIV----ADNT 62

Query: 161 GRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAI-----------FT-RDPDANALE 208
                  I + D   L     +A  +   + +  PA+           F  RDP  N + 
Sbjct: 63  S----AWIEVTDPDALHEEWARAVSTD-YADTSGPAMTPVGESPAGREFAVRDPAGNCVH 117

Query: 209 FTQ 211
           FT 
Sbjct: 118 FTA 120

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A Length = 126

 Score = 40.3 bits (94), Expect = 8e-05
 Identities = 24/126 (19%), Positives = 39/126 (30%), Gaps = 29/126 (23%)

Query: 101 CENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV--GAEMIHLMELPNPDPLSGRPE 158
             + + +  FY+  LG  I              W+ +  G  M+     P  DPL+    
Sbjct: 11  SRDFDSTAAFYER-LGFGIVFRDAG--------WMILQRGDLMLEFFAHPGLDPLASWFS 61

Query: 159 HGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGR----------PAIFT-RDPDANAL 207
                   C+ + D+++        GI  T S   R            +    DPD   L
Sbjct: 62  -------CCLRLDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLL 114

Query: 208 EFTQVD 213
              Q +
Sbjct: 115 RLIQNE 120

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8 Length = 139

 Score = 40.3 bits (94), Expect = 9e-05
 Identities = 21/118 (17%), Positives = 33/118 (27%), Gaps = 9/118 (7%)

Query: 103 NLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGR 162
            L+  + FY+  L L+           Y G    +     HL E                
Sbjct: 21  QLDEIIRFYEEGLCLKR-IGEFSQHNGYDGVMFGLPHADYHL-EF-TQYEGGSTAPVPHP 77

Query: 163 DRHTCIAIRDVSKLKMI---LDKAGISYTLSKS---GRPAIFTRDPDANALEFTQVDG 214
           D      + +  +L  I   L   G     S++       +   DPD   + F    G
Sbjct: 78  DSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGGVTIEDPDGWRIVFMNSKG 135

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A* Length = 132

 Score = 40.0 bits (93), Expect = 1e-04
 Identities = 18/132 (13%), Positives = 39/132 (29%), Gaps = 19/132 (14%)

Query: 91  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 150
            ++ +   +   N+ERS +FY+ I   E     P      R        + +  +     
Sbjct: 11  TITPNLQLVYVSNVERSTDFYRFIFKKEPVFVTP------RYVAFPSSGDALFAIWSGGE 64

Query: 151 DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDK------AGISYTLSKSGRP---AIFTRD 201
           +P++  P          I +     +  + ++        I                  D
Sbjct: 65  EPVAEIPRFS----EIGIMLPTGEDVDKLFNEWTKQKSHQIIVIKEPYTDVFGRTFLISD 120

Query: 202 PDANALEFTQVD 213
           PD + +    +D
Sbjct: 121 PDGHIIRVCPLD 132

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A Length = 302

 Score = 40.8 bits (95), Expect = 1e-04
 Identities = 22/132 (16%), Positives = 41/132 (31%), Gaps = 28/132 (21%)

Query: 90  GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 149
            V+ + ++GI  ++ +    F  ++LGL++ +    D+   R                 +
Sbjct: 6   AVIELGYMGISVKDPDAWKSFATDMLGLQVLDEGEKDRFYLRM----------------D 49

Query: 150 PDPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYTLSKS-------GRPAI 197
                    H G+D    +  R     +   L   L  AG    +              +
Sbjct: 50  YWHHRIVVHHNGQDDLEYLGWRVAGKPEFEALGQKLIDAGYKIRICDKVEAQERMVLGLM 109

Query: 198 FTRDPDANALEF 209
            T DP  N  E 
Sbjct: 110 KTEDPGGNPTEI 121

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP} Length = 137

 Score = 39.4 bits (92), Expect = 2e-04
 Identities = 23/120 (19%), Positives = 45/120 (37%), Gaps = 9/120 (7%)

Query: 97  VGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGR 156
           V +   + +R++++   + G  +   +P        A L  G  ++ +     P  +S  
Sbjct: 6   VELAYTDPDRAVDWLVRVFGFRLLLRQPAIGTIRH-ADLDTGGGIVMVRRTGEPYTVS-- 62

Query: 157 PEHGGRDRHTCIAIRDVSKLKMILDKAG--ISYTLSKS---GRPAIFTRDPDANALEFTQ 211
              G   +   + + DV +  M    AG  I   L       R  +  RD + +  EFT+
Sbjct: 63  CAGGHTCKQVIVWVSDVDEHFMRSTAAGADIVQPLQDKPWGLRQYLV-RDLEGHLWEFTR 121

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B* Length = 292

 Score = 40.4 bits (94), Expect = 2e-04
 Identities = 17/131 (12%), Positives = 37/131 (28%), Gaps = 29/131 (22%)

Query: 91  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 150
           +  + ++G   +++     F    +GL        D   YR                 + 
Sbjct: 2   IERLGYLGFAVKDVPAWDHFLTKSVGLMAAG-SAGDAALYRA----------------DQ 44

Query: 151 DPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYTLSKS-------GRPAIF 198
                  + G  D      +       + ++   L +AG+++T               + 
Sbjct: 45  RAWRIAVQPGELDDLAYAGLEVDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLC 104

Query: 199 TRDPDANALEF 209
            +DP    LE 
Sbjct: 105 LQDPFGLPLEI 115

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A* Length = 300

 Score = 40.0 bits (93), Expect = 3e-04
 Identities = 24/135 (17%), Positives = 44/135 (32%), Gaps = 19/135 (14%)

Query: 90  GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 149
           G   + HV +   +   +L FY+++LG  + ++                A +       N
Sbjct: 139 GEQGMGHVVLSTRDDAEALHFYRDVLGFRLRDSMRLPPQMVGRPADGPPAWLRFFGC--N 196

Query: 150 PDPLS---GRPEHGGRDRHTCIAIRDVSKLKMILDKAG-----ISYTLSKSGR----PAI 197
           P   S             H  + +     + + LD+A      +S TL   GR      +
Sbjct: 197 PRHHSLAFLPMPTSSGIVHLMVEVEQADDVGLCLDRALRRKVPMSATL---GRHVNDLML 253

Query: 198 FT--RDPDANALEFT 210
               + P    +EF 
Sbjct: 254 SFYMKTPGGFDIEFG 268

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A* Length = 300

 Score = 40.0 bits (93), Expect = 3e-04
 Identities = 21/132 (15%), Positives = 39/132 (29%), Gaps = 28/132 (21%)

Query: 90  GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 149
            + S+ ++ I   ++    E+   +LG+   +  P   L  R          + +     
Sbjct: 2   SIRSLGYLRIEATDMAAWREYGLKVLGMVEGKGAPEGALYLRM---DDFPARLVV----- 53

Query: 150 PDPLSGRPEHGGRDRHTCIAIR-----DVSKLKMILDKAGISYTLSKSG-------RPAI 197
                     G  DR             + +++  LD  G  Y  + +           I
Sbjct: 54  --------VPGEHDRLLEAGWECANAEGLQEIRNRLDLEGTPYKEATAAELADRRVDEMI 105

Query: 198 FTRDPDANALEF 209
              DP  N LE 
Sbjct: 106 RFADPSGNCLEV 117

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	214
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	99.91
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	99.89
2p25_A	126	Glyoxalase family protein; structural genomics, MC	99.88
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	99.87
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	99.87
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	99.86
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	99.86
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	99.86
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	99.86
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	99.86
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	99.86
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	99.85
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	99.85
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	99.85
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	99.84
3huh_A	152	Virulence protein STM3117; structural genomics, ny	99.84
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	99.84
1nki_A	135	Probable fosfomycin resistance protein; potassium	99.83
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	99.83
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	99.83
3ghj_A	141	Putative integron gene cassette protein; integron	99.82
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	99.82
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	99.82
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	99.82
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	99.82
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	99.82
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	99.81
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	99.81
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	99.81
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	99.79
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	99.79
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	99.79
2i7r_A	118	Conserved domain protein; structural genomics cons	99.79
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	99.79
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	99.79
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	99.79
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	99.78
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	99.78
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	99.77
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	99.77
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	99.76
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	99.76
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	99.75
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	99.75
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	99.75
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	99.75
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.74
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	99.74
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	99.74
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	99.74
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.73
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	99.72
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	99.71
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.71
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	99.7
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.7
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.69
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	99.68
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.67
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.66
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.66
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.66
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.65
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.65
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.64
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.64
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	99.64
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.64
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.63
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.63
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.63
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.62
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.62
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.62
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.61
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.61
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.61
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.61
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.61
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.6
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.6
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.59
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.58
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.58
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.57
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.57
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.56
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.55
1xy7_A	166	Unknown protein; structural genomics, protein stru	99.53
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.52
2zw5_A	301	Bleomycin acetyltransferase; dimer, two domains; H	99.5
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.49
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.45
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.45
1u6l_A	149	Hypothetical protein; structural genomics, PSI, pr	99.41
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.4
1u7i_A	136	Hypothetical protein; structural genomics, PA1358,	99.39
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.38
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.35
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.33
1tsj_A	139	Conserved hypothetical protein; structural genomic	99.3
3l20_A	172	Putative uncharacterized protein; hypothetical pro	99.23
3oms_A	138	PHNB protein; structural genomics, PSI-2, protein	99.12
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	99.0
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	98.33
1u69_A	163	Hypothetical protein; structural genomics, MSCG, p	98.26
3opy_B	941	6-phosphofructo-1-kinase beta-subunit; ATP binding	98.04
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	96.54
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	96.43
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	93.38
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	93.04
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	93.02
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	92.62
1ccw_A	137	Protein (glutamate mutase); coenzyme B12, radical	92.6
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	92.56
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	92.51
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	92.44
3opy_A	989	6-phosphofructo-1-kinase alpha-subunit; ATP bindin	92.4
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	92.03
3ghj_A	141	Putative integron gene cassette protein; integron	91.71
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	91.04
2p25_A	126	Glyoxalase family protein; structural genomics, MC	90.78
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	90.3
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	90.09
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	89.92
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	89.74
3huh_A	152	Virulence protein STM3117; structural genomics, ny	89.48
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	88.42
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	88.36
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	88.07
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	88.06
2xij_A	762	Methylmalonyl-COA mutase, mitochondrial; isomerase	87.64
1req_A	727	Methylmalonyl-COA mutase; isomerase, intramolecula	87.63
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	87.57
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	87.47
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	86.22
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	85.28
2yxb_A	161	Coenzyme B12-dependent mutase; alpha/beta, structu	84.75
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	84.58
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	84.43
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	83.12
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	82.71
1nki_A	135	Probable fosfomycin resistance protein; potassium	82.31
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	81.69
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	81.43
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	81.09
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	80.9
1k4n_A	192	Protein EC4020, protein YECM; structural genomics,	80.62
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	80.56
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	80.46
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	80.12

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=99.91  E-value=4.6e-23  Score=152.07  Aligned_cols=123  Identities=25%  Similarity=0.329  Sum_probs=97.7

Q ss_pred             ceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEe-------cCCCCCCCCCCCCCC
Q 028083           89 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLME-------LPNPDPLSGRPEHGG  161 (214)
Q Consensus        89 ~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~-------~~~~~~~~~~~~~g~  161 (214)
                      |++++++||.|.|+|++++++||+++|||++.............+++..++..++++.       ..........+..+.
T Consensus         1 M~i~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~   80 (134)
T 3l7t_A            1 MKLKAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDIELEIFGNKLTDSNYCAPPERISWPREAC   80 (134)
T ss_dssp             -CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEETTTTEEEEEEEETTEEEEEEECCTTSTTCCCCCCCCCSSSCCS
T ss_pred             CceeeEeEEEEEeCCHHHHHHHHHHhcCCEEEEEeecCCCcceEEEEecCCeEEEEEecccccccccCCccccCCCCCCC
Confidence            4678999999999999999999999999999865443344444677888998899988       322222222233567


Q ss_pred             cceEEEEEECCHHHHHHHHHhCCCeEEee----cCCceEEEEEcCCCCeEEEEe
Q 028083          162 RDRHTCIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  211 (214)
Q Consensus       162 g~~hiaf~V~dv~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~iEl~~  211 (214)
                      +..|++|.|+|+++++++|+++|+++...    ..|.+.+||+|||||.|||+|
T Consensus        81 g~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~e  134 (134)
T 3l7t_A           81 GLRHLAFYVEDVEASRQELIALGIRVEEVRYDDYTGKKMAFFFDPDGLPLELHE  134 (134)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHTCCCCCCEECTTSCCEEEEEECTTCCEEEEEC
T ss_pred             CeEEEEEEECCHHHHHHHHHhCCCcccceeccCCCceEEEEEECCCCCEEEEeC
Confidence            88999999999999999999999997543    246789999999999999986

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=99.89  E-value=1.1e-22  Score=151.13  Aligned_cols=123  Identities=17%  Similarity=0.255  Sum_probs=97.8

Q ss_pred             ceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeec-CCCCCCceEEEEEECCeEEEEEecCCCCCCCCC-CCCCCcceEE
Q 028083           89 YGVVSVHHVGILCENLERSLEFYQNILGLEINEAR-PHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGR-PEHGGRDRHT  166 (214)
Q Consensus        89 ~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~-~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~-~~~g~g~~hi  166 (214)
                      .|+++++||+|.|+|+++|++||+ +|||++.... .........+|+..|+..++++++..+..+... ...+.+++|+
T Consensus         3 ~M~~~i~hv~i~v~Dl~~a~~FY~-~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~g~~hi   81 (133)
T 3hdp_A            3 HMSLKVHHIGYAVKNIDSALKKFK-RLGYVEESEVVRDEVRKVYIQFVINGGYRVELVAPDGEDSPINKTIKKGSTPYHI   81 (133)
T ss_dssp             CCCCCEEEEEEECSCHHHHHHHHH-HTTCEECSCCEEETTTTEEEEEEEETTEEEEEEEESSTTCTHHHHTTTSCEEEEE
T ss_pred             ccceeeCEEEEEECCHHHHHHHHH-HcCCeeecceeccCCcceEEEEEeCCCEEEEEEecCCCCChHHHHHhcCCceEEE
Confidence            467899999999999999999999 9999997542 122334567788889999999987655433211 1116788999


Q ss_pred             EEEECCHHHHHHHHHhCCCeEEee------cCCceEEEEEcCCCCeEEEEee
Q 028083          167 CIAIRDVSKLKMILDKAGISYTLS------KSGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       167 af~V~dv~~~~~~l~~~G~~~~~~------~~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      ||.|+|+++++++|+++|+++...      ..|.+.+|++|||||+|||+|.
T Consensus        82 af~v~di~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~dPdG~~iEl~e~  133 (133)
T 3hdp_A           82 CYEVEDIQKSIEEMSQIGYTLFKKAEIAPAIDNRKVAFLFSTDIGLIELLEK  133 (133)
T ss_dssp             EEEESCHHHHHHHHTTTTEEEEEEEEEEGGGTTEEEEEEEETTTEEEEEEEC
T ss_pred             EEEcCCHHHHHHHHHHcCCccccCCeecccCCCceEEEEECCCceEEEEecC
Confidence            999999999999999999997532      2467899999999999999983

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=99.88  E-value=5.8e-22  Score=145.01  Aligned_cols=122  Identities=20%  Similarity=0.250  Sum_probs=94.0

Q ss_pred             ceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEE
Q 028083           89 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  168 (214)
Q Consensus        89 ~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf  168 (214)
                      ||+.+++|+.|.|+|++++.+||+++|||++.............+++..++..+.++....+..... ...+.+..|++|
T Consensus         1 M~~~~i~hi~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~-~~~~~g~~~~~~   79 (126)
T 2p25_A            1 MFFKEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQELEIFISDQFPARPS-YPEALGLRHLAF   79 (126)
T ss_dssp             CTTSCCCCEEEEESCHHHHHHHHTTTTCCEEEEEEEEGGGTEEEEEEEETTEEEEEEECTTCCCCCC-SSCCSSCCCEEE
T ss_pred             CcccccceEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCcceEEEEecCCeEEEEEeccCCCCCCC-CCCCccceEEEE
Confidence            5678999999999999999999999999998854321122223456788877888887644322111 123457789999


Q ss_pred             EECCHHHHHHHHHhCCCeEEee----cCCceEEEEEcCCCCeEEEEe
Q 028083          169 AIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  211 (214)
Q Consensus       169 ~V~dv~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~iEl~~  211 (214)
                      .|+|+++++++|+++|+++...    ..|.+.+||+|||||.|||+|
T Consensus        80 ~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~e  126 (126)
T 2p25_A           80 KVEHIEEVIAFLNEQGIETEPLRVDDFTGKKMTFFFDPDGLPLELHE  126 (126)
T ss_dssp             ECSCHHHHHHHHHHTTCCCCCCEECTTTCCEEEEEECTTCCEEEEEC
T ss_pred             EeCCHHHHHHHHHHcCCccccccccCCCCcEEEEEECCCCCEEEeeC
Confidence            9999999999999999987543    245689999999999999986

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=99.87  E-value=1.9e-22  Score=154.92  Aligned_cols=130  Identities=16%  Similarity=0.195  Sum_probs=102.6

Q ss_pred             ccCCcceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCC--------------CCCceEEEEEECCeEEEEEecCC
Q 028083           84 KEIRDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD--------------KLPYRGAWLWVGAEMIHLMELPN  149 (214)
Q Consensus        84 ~~~~~~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~--------------~~~~~~~~l~~g~~~l~l~~~~~  149 (214)
                      +...+.++++++||+|.|.|++++++||+++|||++......+              ......+|+..|+..+++++...
T Consensus        10 ~~~~~~~~~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~leL~~~~~   89 (159)
T 3gm5_A           10 MSKNILDMRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFELGPLQLELIEPDE   89 (159)
T ss_dssp             CCSSCCCGGGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEETTEEEEEEEECS
T ss_pred             ccccccccccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEecCCEEEEEEEECC
Confidence            3445778899999999999999999999999999976432111              23456788888999999998754


Q ss_pred             CCCCCCC--CCCCCcceEEEEEECCHHHHHHHHHhCCCeEEee--cCCceEEEEEcCC--CCeEEEEeec
Q 028083          150 PDPLSGR--PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS--KSGRPAIFTRDPD--ANALEFTQVD  213 (214)
Q Consensus       150 ~~~~~~~--~~~g~g~~hiaf~V~dv~~~~~~l~~~G~~~~~~--~~g~~~~~~~DPd--G~~iEl~~~~  213 (214)
                      ..++...  ..++.|++|+||.|+|+++++++|+++|+++...  ..|.+.+||.|||  |++|||+|.+
T Consensus        90 ~~~~~~~~l~~~~~g~~Hiaf~v~di~~~~~~l~~~G~~~~~~~~~~g~~~~~~~dpd~~G~~iEl~e~~  159 (159)
T 3gm5_A           90 NPSTWREFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQKGDFEGGRYAYIDTLRALKVMIELLENY  159 (159)
T ss_dssp             SSCHHHHHHHHHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEETTEEEEEESCHHHHSSEEEEEEEC
T ss_pred             CCChhHHHhhcCCceEEEEEEEcCCHHHHHHHHHHCCCcEeeccccCCeeEEEEeccccCcEEEEEEecC
Confidence            4321110  1246789999999999999999999999998543  3578999999999  9999999864

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=99.87  E-value=6.7e-22  Score=145.74  Aligned_cols=123  Identities=26%  Similarity=0.409  Sum_probs=95.9

Q ss_pred             eeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCC---CCCCCcceEE
Q 028083           90 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGR---PEHGGRDRHT  166 (214)
Q Consensus        90 ~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~---~~~g~g~~hi  166 (214)
                      |+.+++||+|.|+|++++++||+++|||++....+.+......+|+..|+..++++.......+...   ...+.+..|+
T Consensus         2 m~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~hi   81 (134)
T 3rmu_A            2 MLGRLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNTKMELLHPLGLDSPIAGFLQKNKAGGMHHI   81 (134)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEECSSSEEEEEEECSTTCTTHHHHHHCTTCEEEEE
T ss_pred             ccceeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEecCCEEEEEEecCCCCchhhhhhhccCCCCceEE
Confidence            5789999999999999999999999999998653322334566788889888998877654433211   1235678999


Q ss_pred             EEEECCHHHHHHHHHhCCCeEEee-----cCCceEEEE--EcCCCCeEEEEee
Q 028083          167 CIAIRDVSKLKMILDKAGISYTLS-----KSGRPAIFT--RDPDANALEFTQV  212 (214)
Q Consensus       167 af~V~dv~~~~~~l~~~G~~~~~~-----~~g~~~~~~--~DPdG~~iEl~~~  212 (214)
                      +|.|+|+++++++|+++|+++..+     ..|.+.+++  +|||||.|||+|.
T Consensus        82 ~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~e~  134 (134)
T 3rmu_A           82 CIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPKDCGGVLVELEQA  134 (134)
T ss_dssp             EEEESCHHHHHHHHHHTTCTTBCCCCEECTTSSEEEEECSCSSCCSCEEEEEC
T ss_pred             EEEcCCHHHHHHHHHHcCCcccCCCcccCCCCceEEEEecCCCCcEEEEEEcC
Confidence            999999999999999999987433     134556666  8999999999983

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=99.86  E-value=8.9e-21  Score=140.08  Aligned_cols=120  Identities=18%  Similarity=0.288  Sum_probs=95.7

Q ss_pred             cceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEE
Q 028083           88 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTC  167 (214)
Q Consensus        88 ~~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hia  167 (214)
                      .|++.+++|+.|.|.|++++++||+++|||++....+      ..+++..++..+.+........+. ....+.+..|++
T Consensus         5 ~m~~~~i~hi~l~v~D~~~a~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~   77 (133)
T 3ey7_A            5 LMKISHLDHLVLTVADIPTTTNFYEKVLGMKAVSFGA------GRIALEFGHQKINLHQLGNEFEPK-AQNVRVGSADLC   77 (133)
T ss_dssp             CCCCCEEEEEEEEESCHHHHHHHHHHHHCCEEEEETT------TEEEEEETTEEEEEEETTSCCSSC-CTTCCTTCCEEE
T ss_pred             EeEecccCEEEEEECCHHHHHHHHHHccCceEEEecC------CeEEEEcCCEEEEEEcCCCCcccc-CCCCCCCccEEE
Confidence            4567899999999999999999999999999987532      246788888888888765443222 223456779999


Q ss_pred             EEECC-HHHHHHHHHhCCCeEEeec---C---C-ceEEEEEcCCCCeEEEEeecC
Q 028083          168 IAIRD-VSKLKMILDKAGISYTLSK---S---G-RPAIFTRDPDANALEFTQVDG  214 (214)
Q Consensus       168 f~V~d-v~~~~~~l~~~G~~~~~~~---~---g-~~~~~~~DPdG~~iEl~~~~~  214 (214)
                      |.|+| +++++++|+++|+++..++   .   + .+.+||+|||||.|||+|+++
T Consensus        78 ~~v~dd~~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~  132 (133)
T 3ey7_A           78 FITDTVLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPDGNLIEVSTYSN  132 (133)
T ss_dssp             EECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEESCC
T ss_pred             EEeCcHHHHHHHHHHHCCCccccCCccccCCCCCeEEEEEECCCCCEEEEEecCC
Confidence            99997 9999999999999875332   1   1 379999999999999999764

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=99.86  E-value=9e-21  Score=143.75  Aligned_cols=127  Identities=17%  Similarity=0.213  Sum_probs=96.9

Q ss_pred             CcceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCC------CCceEEEEEECC-eEEEEEecCCCCCCCCC-CC
Q 028083           87 RDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK------LPYRGAWLWVGA-EMIHLMELPNPDPLSGR-PE  158 (214)
Q Consensus        87 ~~~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~------~~~~~~~l~~g~-~~l~l~~~~~~~~~~~~-~~  158 (214)
                      .++++.+++||.|.|.|++++++||+++|||++......+.      .....+|+..++ ..++++........... ..
T Consensus        13 ~~~~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~   92 (156)
T 3kol_A           13 APGNLRKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDLFGEPELSPPDPNPEK   92 (156)
T ss_dssp             CTTSSCCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTTSEEEEECTTSCEEEEEECTTCCCSSSSTTC
T ss_pred             CccccceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCCcEEEEEeCCCCEEEEEecCCCCcCCCCCCC
Confidence            46778999999999999999999999999999986322111      112346777754 78888877654322212 22


Q ss_pred             CCCcceEEEEEEC--CHHHHHHHHHhCCCeEEeec---CCceEEEEEcCCCCeEEEEeec
Q 028083          159 HGGRDRHTCIAIR--DVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       159 ~g~g~~hiaf~V~--dv~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      ...+..|++|.|+  |+++++++|+++|+++...+   ..++.+||+|||||.|||++.+
T Consensus        93 ~~~~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~~  152 (156)
T 3kol_A           93 TFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAHGPVTRPTGRGVYFYDPDGFMIEIRCDP  152 (156)
T ss_dssp             CCSSCCEEEEECCGGGHHHHHHHHHHTTCCEEEEEEEC-CCEEEEEECTTSCEEEEEECC
T ss_pred             CCCceEEEEEEecHHHHHHHHHHHHHCCCccccCceecCCccEEEEECCCCCEEEEEecC
Confidence            4567899999999  99999999999999986432   3467999999999999999865

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=99.86  E-value=6e-22  Score=153.05  Aligned_cols=125  Identities=18%  Similarity=0.285  Sum_probs=97.8

Q ss_pred             ceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCC--CCCCCcceEE
Q 028083           89 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGR--PEHGGRDRHT  166 (214)
Q Consensus        89 ~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~--~~~g~g~~hi  166 (214)
                      +++.+++||+|.|.|+++|++||+++|||++.............+|+..|+..++++....+..+...  ...+.|++|+
T Consensus         4 ~~~~~i~Hv~l~V~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~~~g~~Hi   83 (161)
T 3oa4_A            4 EKSNKLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGESKIELLEPLSEESPIAKFIQKRGEGIHHI   83 (161)
T ss_dssp             -CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEGGGTEEEEEEEETTEEEEEEEESSTTSHHHHHHHHHCSEEEEE
T ss_pred             cccCcCCEEEEEECCHHHHHHHHHHccCCeEeeeeccCCCCeEEEEEeCCCeEEEEEeECCCCChHHHHhhcCCCCeEEE
Confidence            34689999999999999999999999999998654333344567888889999999987655432111  1246789999


Q ss_pred             EEEECCHHHHHHHHHhCCCeEEee-c----CCceEEEE--EcCCCCeEEEEeec
Q 028083          167 CIAIRDVSKLKMILDKAGISYTLS-K----SGRPAIFT--RDPDANALEFTQVD  213 (214)
Q Consensus       167 af~V~dv~~~~~~l~~~G~~~~~~-~----~g~~~~~~--~DPdG~~iEl~~~~  213 (214)
                      +|.|+|+++++++|+++|+++... +    .|...+|+  +|||||+|||++.+
T Consensus        84 af~V~Did~~~~~l~~~G~~~~~~~~~~~~~g~~~~f~~~~DPdG~~iEl~~~~  137 (161)
T 3oa4_A           84 AIGVKSIEERIQEVKENGVQMINDEPVPGARGAQVAFLHPRSARGVLYEFCEKK  137 (161)
T ss_dssp             EEECSCHHHHHHHHHHTTCCBSCSSCEECGGGCEEEEBCGGGTTTCCEEEEECC
T ss_pred             EEEECCHHHHHHHHHHCCCEecccCcccCCCCcEEEEEeccCCCeEEEEEEecC
Confidence            999999999999999999998543 1    24556666  49999999999865

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=99.86  E-value=1.4e-20  Score=138.76  Aligned_cols=118  Identities=20%  Similarity=0.291  Sum_probs=93.8

Q ss_pred             cceeeeEeEEEEEc--CCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceE
Q 028083           88 DYGVVSVHHVGILC--ENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRH  165 (214)
Q Consensus        88 ~~~i~~i~HV~l~V--~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~h  165 (214)
                      .||+.+++||.|.|  .|++++++||+++|||++....... ......|+..++..+.+.......        ..+..|
T Consensus         5 ~m~~~~i~hv~l~v~~~D~~~a~~FY~~~lG~~~~~~~~~~-~~~~~~~~~~~~~~l~l~~~~~~~--------~~~~~~   75 (126)
T 2qqz_A            5 RNYIQGIDHVQVAAPVGCEEEARAFYGETIGMEEIPKPEEL-KKRGGCWFKCGNQEIHIGVEQNFN--------PAKRAH   75 (126)
T ss_dssp             CCCEEEEEEEEEEECTTTHHHHHHHHTTTTCCEEECCCGGG-GGGCCEEEEETTEEEEEEECTTCC--------CCSSSC
T ss_pred             hcccceeeeEEEEcccccHHHHHHHHHhcCCCEEecCcccc-cCCCceEEEeCCEEEEEEecCCCC--------CCCceE
Confidence            46789999999999  8999999999999999998642211 011347788888888876642211        245689


Q ss_pred             EEEEECCHHHHHHHHHhCCCeEEeec--CCceEEEEEcCCCCeEEEEeecC
Q 028083          166 TCIAIRDVSKLKMILDKAGISYTLSK--SGRPAIFTRDPDANALEFTQVDG  214 (214)
Q Consensus       166 iaf~V~dv~~~~~~l~~~G~~~~~~~--~g~~~~~~~DPdG~~iEl~~~~~  214 (214)
                      ++|.|+|+++++++|+++|+++..++  .|.+.+||+|||||.|||++..+
T Consensus        76 ~~f~v~d~~~~~~~l~~~G~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~~  126 (126)
T 2qqz_A           76 PAFYVLKIDEFKQELIKQGIEVIDDHARPDVIRFYVSDPFGNRIEFMENKN  126 (126)
T ss_dssp             EEEEETTHHHHHHHHHHTTCCCEEECSSTTEEEEEEECTTSCEEEEEEECC
T ss_pred             EEEEcCCHHHHHHHHHHcCCCccCCCCCCCeeEEEEECCCCCEEEEEeCCC
Confidence            99999999999999999999976543  46789999999999999998753

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=99.86  E-value=1.3e-20  Score=142.43  Aligned_cols=120  Identities=21%  Similarity=0.279  Sum_probs=92.8

Q ss_pred             cceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECC----eEEEEEecCCCCCCCCCCCCCCcc
Q 028083           88 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRD  163 (214)
Q Consensus        88 ~~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~----~~l~l~~~~~~~~~~~~~~~g~g~  163 (214)
                      .|++.+++||.|.|.|++++++||+++|||++......+......+|+..++    ..+.++.......    ...+.+.
T Consensus         3 ~m~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~----~~~~~~~   78 (144)
T 2c21_A            3 HMPSRRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTS----YKHDEAY   78 (144)
T ss_dssp             ---CCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCC----CCCCSSE
T ss_pred             CCccceeEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcCCCCCceEEEEEecCCCCC----CCCCCCc
Confidence            4667899999999999999999999999999986532222233457787764    6788877654321    1234677


Q ss_pred             eEEEEEECCHHHHHHHHHhCCCeEEeecCCceEE-EEEcCCCCeEEEEee
Q 028083          164 RHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAI-FTRDPDANALEFTQV  212 (214)
Q Consensus       164 ~hiaf~V~dv~~~~~~l~~~G~~~~~~~~g~~~~-~~~DPdG~~iEl~~~  212 (214)
                      .|++|.|+|+++++++|+++|+++..+ .|...+ ||+|||||.|||++.
T Consensus        79 ~h~~f~v~d~~~~~~~l~~~G~~~~~~-~g~~~~~~~~DPdG~~iel~~~  127 (144)
T 2c21_A           79 GHIAIGVEDVKELVADMRKHDVPIDYE-DESGFMAFVVDPDGYYIELLNE  127 (144)
T ss_dssp             EEEEEEESCHHHHHHHHHHTTCCEEEE-CSSSSEEEEECTTSCEEEEEEH
T ss_pred             eEEEEEeCCHHHHHHHHHHCCCEEecc-CCcEEEEEEECCCCCEEEEEEc
Confidence            899999999999999999999998766 665555 999999999999985

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=99.86  E-value=4.7e-21  Score=143.31  Aligned_cols=124  Identities=23%  Similarity=0.188  Sum_probs=94.0

Q ss_pred             ceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEE
Q 028083           89 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  168 (214)
Q Consensus        89 ~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf  168 (214)
                      |++++++||.|.|.|++++++||+++|||++....+........+++. ++..+.++.......+. ....+.+..|++|
T Consensus         1 M~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~~~~~~~~-~~~~~~g~~h~~f   78 (136)
T 2rk0_A            1 MSLSGVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLP-GGLSIVLREHDGGGTDL-FDETRPGLDHLSF   78 (136)
T ss_dssp             -CEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSSEEEEEEECT-TSCEEEEEEETTCSSSC-CCTTSSEEEEEEE
T ss_pred             CCCCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCceEEEEEc-CCCEEEEEeCCCCcccC-CCCCCCCcceEEE
Confidence            578899999999999999999999999999986543222223334455 77788888765432211 1224567789999


Q ss_pred             EE---CCHHHHHHHHHhCCCeEEeec--CCceEEEEEcCCCCeEEEEeecC
Q 028083          169 AI---RDVSKLKMILDKAGISYTLSK--SGRPAIFTRDPDANALEFTQVDG  214 (214)
Q Consensus       169 ~V---~dv~~~~~~l~~~G~~~~~~~--~g~~~~~~~DPdG~~iEl~~~~~  214 (214)
                      .|   +|+++++++|+++|+++..+.  ..++.+||+|||||+|||++..+
T Consensus        79 ~v~~~~d~~~~~~~l~~~G~~~~~~~~~~~g~~~~~~DPdG~~iel~~~~~  129 (136)
T 2rk0_A           79 SVESMTDLDVLEERLAKAGAAFTPTQELPFGWILAFRDADNIALEAMLGRE  129 (136)
T ss_dssp             EESSHHHHHHHHHHHHHHTCCBCCCEEETTEEEEEEECTTCCEEEEEEECT
T ss_pred             EeCCHHHHHHHHHHHHHCCCcccCccccCCceEEEEECCCCCEEEEEEcCC
Confidence            99   799999999999999875332  22489999999999999998753

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=99.85  E-value=7.8e-20  Score=135.48  Aligned_cols=118  Identities=21%  Similarity=0.345  Sum_probs=90.5

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECC----eEEEEEecCCCCCCCCCCCCCCcceEEE
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRDRHTC  167 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~----~~l~l~~~~~~~~~~~~~~~g~g~~hia  167 (214)
                      ++++|+.|.|.|++++++||+++|||++......+......+|+..++    ..+++........    ...+.+..|++
T Consensus         1 m~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~----~~~~~~~~~~~   76 (135)
T 1f9z_A            1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDK----YELGTAYGHIA   76 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCC----CCCCSSEEEEE
T ss_pred             CcceEEEEEeCCHHHHHHHHHhccCcEEEEecccCCCceEEEEEecCCCCCCcEEEEEEcCCCCc----ccCCCCccEEE
Confidence            378999999999999999999999999986543223334556777653    6777776443221    12345778999


Q ss_pred             EEECCHHHHHHHHHhCCCeEEeec----CC-ceEEEEEcCCCCeEEEEeec
Q 028083          168 IAIRDVSKLKMILDKAGISYTLSK----SG-RPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       168 f~V~dv~~~~~~l~~~G~~~~~~~----~g-~~~~~~~DPdG~~iEl~~~~  213 (214)
                      |.|+|+++++++|+++|+++..++    .| .+.+||+|||||.|||++..
T Consensus        77 ~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~  127 (135)
T 1f9z_A           77 LSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEK  127 (135)
T ss_dssp             EECSCHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC-
T ss_pred             EEeCCHHHHHHHHHHCCCEEecCCccCCCCceeEEEEECCCCCEEEEEecC
Confidence            999999999999999999986432    34 36889999999999999864

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=99.85  E-value=1.3e-21  Score=150.30  Aligned_cols=120  Identities=15%  Similarity=0.205  Sum_probs=83.3

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEE-CC-e-EEEEEecCCCCCCCC--CCCCCCcceEE
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GA-E-MIHLMELPNPDPLSG--RPEHGGRDRHT  166 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~-g~-~-~l~l~~~~~~~~~~~--~~~~g~g~~hi  166 (214)
                      ++|+|+.|+|.|+++|++||+++|||++....+..+  .+...+.. ++ . .+.+...........  ....+.+..|+
T Consensus        25 Mri~~v~I~V~Dle~A~~FY~dvLGf~v~~d~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~l  102 (155)
T 4g6x_A           25 MRIHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGA--DRWLTVVSPEAPDGTQLLLEPSSHAAVTPFKEALVADGIPAA  102 (155)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHTTCCEEEEEEEETT--EEEEEEECTTCTTSCEEEEEECCSTTHHHHHHHHHHTTCCSE
T ss_pred             eEEEEEEEEeCCHHHHHHHHHHHhCCEEEEeecCCC--ceEEEEeccCCCcceEEEeccCCCccccccccccccCCceEE
Confidence            589999999999999999999999999886544332  12222222 11 1 222222221111000  01124567899


Q ss_pred             EEEECCHHHHHHHHHhCCCeEEee---cCCceEEEEEcCCCCeEEEEeec
Q 028083          167 CIAIRDVSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       167 af~V~dv~~~~~~l~~~G~~~~~~---~~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      +|.|+|+++++++|+++|+++..+   ..+++.+||+|||||+|||+|.+
T Consensus       103 ~f~VdDvda~~~~l~~~Gv~~~~~p~~~~~g~~~~f~DPdGn~iel~q~~  152 (155)
T 4g6x_A          103 SFAVDDIAAEYERLSALGVRFTQEPTDMGPVVTAILDDTCGNLIQLMQIA  152 (155)
T ss_dssp             EEEESCHHHHHHHHHHTTCCEEEEEEECSSCEEEEEECSSSCEEEEEEC-
T ss_pred             EeeechhhhhhhHHhcCCcEEeeCCEEcCCeEEEEEECCCCCEEEEEEEC
Confidence            999999999999999999998543   24578899999999999999964

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=99.85  E-value=2.6e-20  Score=136.72  Aligned_cols=118  Identities=19%  Similarity=0.279  Sum_probs=91.3

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEE-CCeEEEEEecCCCCCCCCCCCCCCcceEEEEEE
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  170 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~-g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V  170 (214)
                      ++++||.|.|.|++++++||+++|||++......+......+|+.. ++..+.++.........  ...+.+..|++|.|
T Consensus         2 m~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~--~~~~~g~~hi~~~v   79 (127)
T 3e5d_A            2 MKIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFEDGARLEIMSRTDVTGKT--TGENLGWAHIAIST   79 (127)
T ss_dssp             CCCCEEEEECSSHHHHHHHHHHHHCCEECCCEEEGGGTEEEEEEECSSSCEEEEEEETTCCCCC--CSSCSSCCCEEEEC
T ss_pred             CEEEEEEEEECCHHHHHHHHHHhcCCeeecccccCCCCccEEEEEcCCCcEEEEEecCCCCCCC--CcCCCceEEEEEEc
Confidence            5789999999999999999999999999865322223345667776 46678888765433221  12456779999999


Q ss_pred             CC---HHHHHHHHHhCCCeEEeec----CCceEEEEEcCCCCeEEEEe
Q 028083          171 RD---VSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQ  211 (214)
Q Consensus       171 ~d---v~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~~  211 (214)
                      +|   +++++++|+++|+++..++    .|.+.+||+|||||+|||+.
T Consensus        80 ~d~~~v~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~  127 (127)
T 3e5d_A           80 GTKEAVDELTEKLRQDGFAIAGEPRMTGDGYYESVVLDPEGNRIEITW  127 (127)
T ss_dssp             SSHHHHHHHHHHHHHTTCCEEEEEEECTTSCEEEEEECTTSCEEEEEC
T ss_pred             CCHHHHHHHHHHHHHcCCeEecCcccCCCCcEEEEEECCCCCEEEEeC
Confidence            98   8899999999999986432    45688999999999999973

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=99.84  E-value=7.6e-20  Score=139.19  Aligned_cols=120  Identities=20%  Similarity=0.308  Sum_probs=93.1

Q ss_pred             CcceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEE
Q 028083           87 RDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT  166 (214)
Q Consensus        87 ~~~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hi  166 (214)
                      ..+++.+++||.|.|.|++++++||+++|||++....+      ..+++..++..+.+........+. ......+..|+
T Consensus        17 ~~m~i~~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~~~------~~~~l~~~~~~l~l~~~~~~~~~~-~~~~~~g~~hi   89 (152)
T 3huh_A           17 IQMIIDRIDHLVLTVSDISTTIRFYEEVLGFSAVTFKQ------NRKALIFGAQKINLHQQEMEFEPK-ASRPTPGSADL   89 (152)
T ss_dssp             ---CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEETT------TEEEEEETTEEEEEEETTBCCSSC-CSSCCTTCCEE
T ss_pred             CCcccceeeEEEEEeCCHHHHHHHHHhcCCCEEEEccC------CeEEEEeCCeEEEEeccCCcCCCc-CcCCCCCccEE
Confidence            45778999999999999999999999999999987632      346788898888887765432221 12234567899


Q ss_pred             EEEEC-CHHHHHHHHHhCCCeEEeec------CC-ceEEEEEcCCCCeEEEEeec
Q 028083          167 CIAIR-DVSKLKMILDKAGISYTLSK------SG-RPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       167 af~V~-dv~~~~~~l~~~G~~~~~~~------~g-~~~~~~~DPdG~~iEl~~~~  213 (214)
                      +|.++ |+++++++|+++|+++..++      .| .+.+||+|||||+|||++..
T Consensus        90 ~f~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdG~~iEl~~~~  144 (152)
T 3huh_A           90 CFITSTPINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDGNLIEISQYV  144 (152)
T ss_dssp             EEEESSCHHHHHHHHHHTTCCCSEEEEEEEETTEEEEEEEEECTTCCEEEEEEC-
T ss_pred             EEEecCCHHHHHHHHHHCCCeEecCCccccCCCCcEEEEEEECCCCCEEEEEecc
Confidence            99998 99999999999999874321      12 48899999999999999864

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=99.84  E-value=7.7e-20  Score=138.30  Aligned_cols=125  Identities=14%  Similarity=0.227  Sum_probs=94.4

Q ss_pred             cceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCC-----------CCCCceEEEEEECC--eEEEEEecCCCCCCC
Q 028083           88 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPH-----------DKLPYRGAWLWVGA--EMIHLMELPNPDPLS  154 (214)
Q Consensus        88 ~~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~-----------~~~~~~~~~l~~g~--~~l~l~~~~~~~~~~  154 (214)
                      ..++.+++|+.|.|.|++++++||++ |||++......           .......+++..++  ..++++....+....
T Consensus         6 ~~~~~~i~hv~l~v~D~~~a~~FY~~-lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~   84 (153)
T 1ss4_A            6 KNKLLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRFLTPPTIA   84 (153)
T ss_dssp             TCCEEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEEEESCCCC
T ss_pred             cccccceeeEEEEeCCHHHHHHHHHH-CCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCCCCcEEEEEEecCCCCcc
Confidence            34678999999999999999999999 99998854221           11234556777743  678887754332221


Q ss_pred             ---CCCCCCCcceEEEEEECCHHHHHHHHHhCCCeEEee----cCCceEEEEEcCCCCeEEEEeec
Q 028083          155 ---GRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       155 ---~~~~~g~g~~hiaf~V~dv~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                         .....+.|++|++|.|+|+++++++|+++|+++..+    ..|.+.+||+|||||.|||++..
T Consensus        85 ~~~~~~~~~~g~~hl~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  150 (153)
T 1ss4_A           85 DHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENSYRLCYIRGVEGILIGLAEEL  150 (153)
T ss_dssp             BCTTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETTTEEEEEEECGGGCEEEEEEEC
T ss_pred             cccCCCCCCCceEEEEEEeCCHHHHHHHHHHCCCeecCCCcccCCceEEEEEECCCCCEEEEEecc
Confidence               112345678899999999999999999999998533    24678999999999999999864

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=99.83  E-value=2.1e-19  Score=134.26  Aligned_cols=112  Identities=22%  Similarity=0.369  Sum_probs=91.7

Q ss_pred             eeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEEE
Q 028083           90 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  169 (214)
Q Consensus        90 ~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~  169 (214)
                      |+++++||.|.|.|++++++||+++|||++....+      ...|+..++..+.+......      +....+..|++|.
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~------~~~~~~~~h~~~~   68 (135)
T 1nki_A            1 MLTGLNHLTLAVADLPASIAFYRDLLGFRLEARWD------QGAYLELGSLWLCLSREPQY------GGPAADYTHYAFG   68 (135)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEEETTEEEEEEECTTC------CCCCSSSCEEEEE
T ss_pred             CCceEeEEEEEeCCHHHHHHHHHHhcCCEEEEcCC------CceEEecCCEEEEEEeCCCC------CCCCCCcceEEEE
Confidence            57899999999999999999999999999986532      13678888888887765321      1234567899999


Q ss_pred             EC--CHHHHHHHHHhCCCeEEeec-CCceEEEEEcCCCCeEEEEeec
Q 028083          170 IR--DVSKLKMILDKAGISYTLSK-SGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       170 V~--dv~~~~~~l~~~G~~~~~~~-~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      |+  |+++++++|+++|+++..++ .+++.+||+|||||.|||++..
T Consensus        69 v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  115 (135)
T 1nki_A           69 IAAADFARFAAQLRAHGVREWKQNRSEGDSFYFLDPDGHRLEAHVGD  115 (135)
T ss_dssp             ECHHHHHHHHHHHHHTTCCEEECCCSSSCEEEEECTTCCEEEEESCC
T ss_pred             ccHHHHHHHHHHHHHCCCceecCCCCCeEEEEEECCCCCEEEEEECC
Confidence            98  99999999999999986543 4678999999999999999753

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=99.83  E-value=2.4e-19  Score=134.91  Aligned_cols=115  Identities=23%  Similarity=0.363  Sum_probs=92.9

Q ss_pred             eeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEEE
Q 028083           90 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  169 (214)
Q Consensus        90 ~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~  169 (214)
                      |+++++||.|.|.|++++++||+++|||++....+      ..+|+..++..+.+.......   ..+....+..|++|.
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~~---~~~~~~~~~~hi~~~   71 (141)
T 1npb_A            1 MLQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN------TGAYLTCGDLWVCLSYDEARQ---YVPPQESDYTHYAFT   71 (141)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHTTSCCEEEEEET------TEEEEEETTEEEEEEECTTCC---CCCGGGSCSCEEEEE
T ss_pred             CCceEEEEEEEeCCHHHHHHHHHhccCCEEEeecC------CcEEEEECCEEEEEEECCCCC---CCCCCCCCceEEEEE
Confidence            57899999999999999999999999999986532      136788888888887654221   112234567899999


Q ss_pred             EC--CHHHHHHHHHhCCCeEEeec-CCceEEEEEcCCCCeEEEEeec
Q 028083          170 IR--DVSKLKMILDKAGISYTLSK-SGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       170 V~--dv~~~~~~l~~~G~~~~~~~-~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      |+  |+++++++|+++|+++...+ .+++.+||+|||||.|||++.+
T Consensus        72 v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  118 (141)
T 1npb_A           72 VAEEDFEPLSQRLEQAGVTIWKQNKSEGASFYFLDPDGHKLELHVGS  118 (141)
T ss_dssp             CCHHHHHHHHHHHHHTTCCEEECCCSSSEEEEEECTTCCEEEEEECC
T ss_pred             eCHHHHHHHHHHHHHCCCeEeccCCCceeEEEEECCCCCEEEEEECc
Confidence            97  99999999999999986543 4678999999999999999853

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=99.83  E-value=1.6e-20  Score=141.31  Aligned_cols=126  Identities=15%  Similarity=0.256  Sum_probs=94.9

Q ss_pred             cceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECC------eEEEEEecCCCCCCCCC--CCC
Q 028083           88 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA------EMIHLMELPNPDPLSGR--PEH  159 (214)
Q Consensus        88 ~~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~------~~l~l~~~~~~~~~~~~--~~~  159 (214)
                      +.|+.+++||.|.|.|++++++||+++|||++.............+++..++      ..++++.......+...  ..+
T Consensus         4 ~~m~~~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~   83 (148)
T 1jc4_A            4 EDLFICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKH   83 (148)
T ss_dssp             CCCCSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHT
T ss_pred             cCccceeeEEEEEeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCCCCcCcceEEEEeecCCCCChHHHHHHhC
Confidence            3467899999999999999999999999999986532222234567788876      77888876544321100  113


Q ss_pred             C--CcceEEEEEECCHHHHHHHHHhCCCeEE-eec----CCceEEEE--EcCCCCeEEEEeec
Q 028083          160 G--GRDRHTCIAIRDVSKLKMILDKAGISYT-LSK----SGRPAIFT--RDPDANALEFTQVD  213 (214)
Q Consensus       160 g--~g~~hiaf~V~dv~~~~~~l~~~G~~~~-~~~----~g~~~~~~--~DPdG~~iEl~~~~  213 (214)
                      +  .+..|++|.|+|+++++++|+++|+++. ..+    .|...+|+  +|||||.|||++.+
T Consensus        84 ~~~~g~~h~~~~v~d~~~~~~~l~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~~~  146 (148)
T 1jc4_A           84 NGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQYP  146 (148)
T ss_dssp             TTCCEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEECC
T ss_pred             CCCCceEEEEEECCCHHHHHHHHHHCCCeecCcCcccCCCceEEEEEeecCCCcEEEEEEecC
Confidence            3  5788999999999999999999999876 221    34456666  99999999999865

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=99.82  E-value=2e-19  Score=135.97  Aligned_cols=113  Identities=27%  Similarity=0.448  Sum_probs=87.8

Q ss_pred             CCcceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECC--eEEEEEecCCCCCCCCCCCCCCcc
Q 028083           86 IRDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRD  163 (214)
Q Consensus        86 ~~~~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~--~~l~l~~~~~~~~~~~~~~~g~g~  163 (214)
                      ..+|++.+++||.|.|.|++++++||+++|||++....+.    ...+|+..++  ..+.+.....          ..+.
T Consensus        21 ~~~m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~----~~~~~~~~~~~~~~l~l~~~~~----------~~~~   86 (141)
T 3ghj_A           21 GVPMNIKGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDSA----RRWNFLWVSGRAGMVVLQEEKE----------NWQQ   86 (141)
T ss_dssp             -----CCCCCEEEEEESCHHHHHHHHHHTSCCEEEEEETT----TTEEEEEETTTTEEEEEEECCS----------SCCC
T ss_pred             cCceeeceecEEEEEeCCHHHHHHHHHHhcCCEEEEecCC----CcEEEEEecCCCcEEEEeccCC----------CCCC
Confidence            3578889999999999999999999999999999876431    1346677764  6777776522          1356


Q ss_pred             eEEEEEEC--CHHHHHHHHHhCCCeEEeec----CCceEEEEEcCCCCeEEEEee
Q 028083          164 RHTCIAIR--DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       164 ~hiaf~V~--dv~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      .|++|.|+  |+++++++|+++|+++..+.    .+.+.+||+|||||.|||++.
T Consensus        87 ~h~~~~v~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  141 (141)
T 3ghj_A           87 QHFSFRVEKSEIEPLKKALESKGVSVHGPVNQEWMQAVSLYFADPNGHALEFTAL  141 (141)
T ss_dssp             CEEEEEECGGGHHHHHHHHHHTTCCCEEEEEEGGGTEEEEEEECTTCCEEEEEEC
T ss_pred             ceEEEEEeHHHHHHHHHHHHHCCCeEeCCcccCCCCceEEEEECCCCCEEEEEEC
Confidence            89999998  99999999999999976332    346899999999999999863

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=99.82  E-value=1.6e-19  Score=135.55  Aligned_cols=115  Identities=15%  Similarity=0.256  Sum_probs=89.3

Q ss_pred             eeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCc-eEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEE
Q 028083           90 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPY-RGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  168 (214)
Q Consensus        90 ~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~-~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf  168 (214)
                      |+++++|+.|.|.|++++++||+++|||++....+...... ...|+..|+..+.+......  +      .++..|++|
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~g~~~l~l~~~~~~--~------~~~~~h~~~   72 (139)
T 1r9c_A            1 MIEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGDIWVAIMQGEKL--A------ERSYNHIAF   72 (139)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEETTEEEEEEECCCC--S------SCCSCEEEE
T ss_pred             CCceEEEEEEEeCCHHHHHHHHHHhhCCEEeecCCCccccccceEEEEECCEEEEEEeCCCC--C------CCCeeEEEE
Confidence            57899999999999999999999999999986543211110 11267778887888764321  1      346789999


Q ss_pred             EEC--CHHHHHHHHHhCCCeEEeec----CCceEEEEEcCCCCeEEEEee
Q 028083          169 AIR--DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       169 ~V~--dv~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      .|+  |+++++++++++|+++..++    .+++.+||+|||||.|||++.
T Consensus        73 ~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  122 (139)
T 1r9c_A           73 KIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSIYFYDDDNHMFELHTG  122 (139)
T ss_dssp             ECCGGGHHHHHHHHHHHTCCBCCCCC-----CCEEEEECTTSCEEEEECC
T ss_pred             EcCHHHHHHHHHHHHHCCCcccCCcccCCCCeEEEEEECCCCCEEEEEeC
Confidence            999  99999999999999976442    357899999999999999974

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=99.82  E-value=2.7e-19  Score=135.95  Aligned_cols=119  Identities=18%  Similarity=0.300  Sum_probs=92.1

Q ss_pred             CcceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEE
Q 028083           87 RDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT  166 (214)
Q Consensus        87 ~~~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hi  166 (214)
                      .++++.+++||.|.|.|++++++||+++|||++....+      ...++..++..+.+........+.. .....|..|+
T Consensus        21 ~~m~i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~------~~~~l~~g~~~l~l~~~~~~~~~~~-~~~~~g~~~~   93 (147)
T 3zw5_A           21 QSMLIRRLDHIVMTVKSIKDTTMFYSKILGMEVMTFKE------DRKALCFGDQKFNLHEVGKEFEPKA-AHPVPGSLDI   93 (147)
T ss_dssp             HHTSCEEEEEEEEEESCHHHHHHHHHHHHCCEEEEETT------TEEEEEETTEEEEEEETTSCCSSCC-SSCCTTCCEE
T ss_pred             cceecccccEEEEEeCCHHHHHHHHHHhcCCEEEecCC------CceEEEECCcEEEEEEcCCCcCccc-CCCCCCCceE
Confidence            46778999999999999999999999999999986432      2356788888888876543322211 1233466789


Q ss_pred             EEEEC-CHHHHHHHHHhCCCeEEeec------CC-ceEEEEEcCCCCeEEEEee
Q 028083          167 CIAIR-DVSKLKMILDKAGISYTLSK------SG-RPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       167 af~V~-dv~~~~~~l~~~G~~~~~~~------~g-~~~~~~~DPdG~~iEl~~~  212 (214)
                      +|.+. |+++++++|+++|+++..++      .| .+.+||+|||||+|||+++
T Consensus        94 ~~~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdGn~iEl~~y  147 (147)
T 3zw5_A           94 CLITEVPLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDRNLIEVSNY  147 (147)
T ss_dssp             EEECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEEC
T ss_pred             EEEeccCHHHHHHHHHHcCCceeeCcccccCCCCceEEEEEECCCCCEEEEecC
Confidence            99987 99999999999999875321      12 3689999999999999974

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=99.82  E-value=1.8e-19  Score=132.99  Aligned_cols=121  Identities=21%  Similarity=0.262  Sum_probs=90.2

Q ss_pred             CcceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEEC--CeEEEEEecCCCCCCCCCCCCCCcce
Q 028083           87 RDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG--AEMIHLMELPNPDPLSGRPEHGGRDR  164 (214)
Q Consensus        87 ~~~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g--~~~l~l~~~~~~~~~~~~~~~g~g~~  164 (214)
                      ..+|+++++||.|.|.|++++++||+++|||++....+... ....+.+..+  +..+.+........    ....++..
T Consensus         7 ~~~m~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~l~l~~~~~~~~----~~~~~~~~   81 (133)
T 4hc5_A            7 GSLMIAYVHSATIIVSDQEKALDFYVNTLGFEKVFDNQLDP-NMRFVTVVPPGAQTQVALGLPSWYED----GRKPGGYT   81 (133)
T ss_dssp             -CCSCCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEET-TEEEEEEECTTCSCEEEEECGGGCSS----CCCSCEEE
T ss_pred             ccccccceeEEEEEECCHHHHHHHHHhCcCCcEeeecccCC-CceEEEEECCCCceEEEEecCccccc----ccCCCCeE
Confidence            35678899999999999999999999999999986543111 1222334443  45677766542111    11235678


Q ss_pred             EEEEEECCHHHHHHHHHhCCCeEEee----cCCceEEEEEcCCCCeEEEEee
Q 028083          165 HTCIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       165 hiaf~V~dv~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      |++|.|+|+++++++|+++|+++..+    ..|.+.++|+|||||.|||+|.
T Consensus        82 ~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~G~~~el~ee  133 (133)
T 4hc5_A           82 GISLITRDIDEAYKTLTERGVTFTKPPEMMPWGQRATWFSDPDGNQFFLVEE  133 (133)
T ss_dssp             EEEEEESCHHHHHHHHHHTTCEESSSCEECTTSCEEEEEECTTCEEEEEEEC
T ss_pred             EEEEEeCCHHHHHHHHHHCCCEeecCCCcCCCCCEEEEEECCCCCEEEEEeC
Confidence            99999999999999999999998632    2456999999999999999973

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=99.82  E-value=2.6e-19  Score=132.79  Aligned_cols=116  Identities=16%  Similarity=0.270  Sum_probs=88.8

Q ss_pred             eeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCc-eEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEE
Q 028083           90 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPY-RGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  168 (214)
Q Consensus        90 ~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~-~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf  168 (214)
                      |+.+++|+.|.|.|++++.+||+++|||++....+...... ...|+..|+..+.+......        ..++..|++|
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~--------~~~~~~h~~~   72 (133)
T 2p7o_A            1 MISGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSGDKTFSLSKEKFFLIAGLWICIMEGDSL--------QERTYNHIAF   72 (133)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHHHHCCEECC-----CCCSSCEEEEEETTEEEEEEECSSC--------CCCCSCEEEE
T ss_pred             CCceEEEEEEEcCCHHHHHHHHHHhcCCEEeeecCCcccccCCceEEEeCCEEEEEecCCCC--------CCCCeeEEEE
Confidence            56899999999999999999999999999986433211110 11367778877777764321        1356789999


Q ss_pred             EEC--CHHHHHHHHHhCCCeEEeec----CCceEEEEEcCCCCeEEEEeec
Q 028083          169 AIR--DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       169 ~V~--dv~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      .|+  |+++++++++++|+++..++    .+++.+||+|||||.|||++..
T Consensus        73 ~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  123 (133)
T 2p7o_A           73 QIQSEEVDEYTERIKALGVEMKPERPRVQGEGRSIYFYDFDNHLFELHAGT  123 (133)
T ss_dssp             ECCGGGHHHHHHHHHHHTCCEECCCCCCTTCCCEEEEECSSSCEEEEECSS
T ss_pred             EcCHHHHHHHHHHHHHCCCcccCCCccCCCCeeEEEEECCCCCEEEEEcCC
Confidence            995  99999999999999987543    3578999999999999999854

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=99.82  E-value=3.4e-19  Score=140.22  Aligned_cols=124  Identities=15%  Similarity=0.207  Sum_probs=93.3

Q ss_pred             eeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECC-------------------eEEEEEecCCC
Q 028083           90 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA-------------------EMIHLMELPNP  150 (214)
Q Consensus        90 ~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~-------------------~~l~l~~~~~~  150 (214)
                      ...+++||+|.|.|++++++||+++|||++.............+|+..++                   ..++++.....
T Consensus        31 ~~~~l~Hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~  110 (187)
T 3vw9_A           31 KDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGT  110 (187)
T ss_dssp             TTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTCSSEEEEEEETTG
T ss_pred             ceeEEEEEEEEeCCHHHHHHHHHHhcCcEEeeccccCCCceeEEEecCCCcccccccccchhhhcccCCceEEEEEecCC
Confidence            34799999999999999999999999999987654444455666676543                   46777554322


Q ss_pred             CCCC-CC----CCCCCcceEEEEEECCHHHHHHHHHhCCCeEEeecC---CceEEEEEcCCCCeEEEEeec
Q 028083          151 DPLS-GR----PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS---GRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       151 ~~~~-~~----~~~g~g~~hiaf~V~dv~~~~~~l~~~G~~~~~~~~---g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      .... ..    .....+++|++|.|+|+++++++|+++|+++...+.   .+..+||+|||||.|||+|..
T Consensus       111 ~~~~~~~~~~g~~~~~g~~hl~f~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  181 (187)
T 3vw9_A          111 EDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPN  181 (187)
T ss_dssp             GGCTTCCCCCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSSTTCEEEECTTCCEEEEECGG
T ss_pred             CCCCccccccCCCCCCceeEEEEEECCHHHHHHHHHHCCCeEeeCCccCCcceEEEEECCCCCEEEEEEcc
Confidence            1111 11    112347889999999999999999999999876542   245689999999999999864

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=99.81  E-value=6.5e-19  Score=131.18  Aligned_cols=115  Identities=19%  Similarity=0.137  Sum_probs=88.7

Q ss_pred             cceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEE-CCeEEEEEecCCCCCCCCCCCCCCcceEE
Q 028083           88 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHT  166 (214)
Q Consensus        88 ~~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~-g~~~l~l~~~~~~~~~~~~~~~g~g~~hi  166 (214)
                      +.++.+++||.|.|.|++++++||+++|||++....+      ..+++.. ++..+.++....+.     ....++..|+
T Consensus         8 ~~~~~~i~~v~l~v~D~~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~l~l~~~~~~~-----~~~~~~~~~~   76 (132)
T 3sk2_A            8 AGPTITPNLQLVYVSNVERSTDFYRFIFKKEPVFVTP------RYVAFPSSGDALFAIWSGGEEP-----VAEIPRFSEI   76 (132)
T ss_dssp             CCCCCCCCEEEEECSCHHHHHHHHHHHHTCCCSEECS------SEEEEECSTTCEEEEESSSCCC-----CTTSCCCEEE
T ss_pred             CCCcceeeEEEEEECCHHHHHHHHHHHcCCeEEEcCC------CEEEEEcCCCcEEEEEeCCCCC-----cCCCCCcceE
Confidence            3445799999999999999999999999999876543      2234554 45778887654221     1233566899


Q ss_pred             EEEECC---HHHHHHHHHh---CCCeEEeec---CCceEEEEEcCCCCeEEEEeec
Q 028083          167 CIAIRD---VSKLKMILDK---AGISYTLSK---SGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       167 af~V~d---v~~~~~~l~~---~G~~~~~~~---~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      +|.|+|   +++++++|++   +|+++..++   ..++.++|+|||||+|||++++
T Consensus        77 ~~~v~~~~dv~~~~~~l~~~~~~G~~~~~~p~~~~~g~~~~~~DPdGn~iel~~~d  132 (132)
T 3sk2_A           77 GIMLPTGEDVDKLFNEWTKQKSHQIIVIKEPYTDVFGRTFLISDPDGHIIRVCPLD  132 (132)
T ss_dssp             EEEESSHHHHHHHHHHHHHCSSSCCEEEEEEEEETTEEEEEEECTTCCEEEEEECC
T ss_pred             EEEeCCHHHHHHHHHHHHhhhcCCCEEeeCCcccCceEEEEEECCCCCEEEEEeCC
Confidence            999986   9999999999   999986432   2248999999999999999864

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=99.81  E-value=1.4e-19  Score=139.64  Aligned_cols=120  Identities=18%  Similarity=0.325  Sum_probs=93.5

Q ss_pred             ceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCC---CC-CCCCCcce
Q 028083           89 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS---GR-PEHGGRDR  164 (214)
Q Consensus        89 ~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~---~~-~~~g~g~~  164 (214)
                      +++.+++||.|.|.|++++++||+++|||++....+.     ..+|+..|+..+.++.......+.   .. ...+.|..
T Consensus         4 ~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~-----~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~   78 (160)
T 3r4q_A            4 KPPSAIMETALYADDLDAAEAFYRDVFGLEMVLKLPG-----QLVFFKCGRQMLLLFDPQESSRADANNPIPRHGAVGQG   78 (160)
T ss_dssp             CCCSCEEEEEEECSCHHHHHHHHHHHSCCEEEEEETT-----TEEEEEETTEEEEEECHHHHTCCCTTCCSCCCEEEEEC
T ss_pred             cccccccEEEEEeCCHHHHHHHHHHhcCCEEEEecCC-----cEEEEeCCCEEEEEEecCCccCccccCCCCcCCCccee
Confidence            4568999999999999999999999999999875431     356778888777776543221110   11 22345678


Q ss_pred             EEEEEE---CCHHHHHHHHHhCCCeEEee---cCCceEEEEEcCCCCeEEEEeec
Q 028083          165 HTCIAI---RDVSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       165 hiaf~V---~dv~~~~~~l~~~G~~~~~~---~~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      |++|.|   +|+++++++|+++|+++..+   ..+++.+||+|||||+|||++.+
T Consensus        79 hi~f~V~~~~dld~~~~~l~~~G~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  133 (160)
T 3r4q_A           79 HFCFYADDKAEVDEWKTRFEALEIPVEHYHRWPNGSYSVYIRDPAGNSVEVGEGK  133 (160)
T ss_dssp             EEEEEESSHHHHHHHHHHHHTTTCCCCEEEECTTSCEEEEEECTTCCEEEEEEGG
T ss_pred             EEEEEeCCHHHHHHHHHHHHHCCCEEeccccccCCcEEEEEECCCCCEEEEEeCC
Confidence            999999   79999999999999997533   24789999999999999999854

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=99.81  E-value=9.6e-20  Score=138.75  Aligned_cols=119  Identities=17%  Similarity=0.124  Sum_probs=90.6

Q ss_pred             ceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCC-CCCCcceEEE
Q 028083           89 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRP-EHGGRDRHTC  167 (214)
Q Consensus        89 ~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~-~~g~g~~hia  167 (214)
                      ||+.+++|+.|.|.|++++++||+++|||++....+      ..+++..++..+.++...........+ ..+.+..|++
T Consensus         1 MM~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~   74 (150)
T 3bqx_A            1 MSLQQVAVITLGIGDLEASARFYGEGFGWAPVFRNP------EIIFYQMNGFVLATWLVQNLQEDVGVAVTSRPGSMALA   74 (150)
T ss_dssp             --CCCCCEEEEEESCHHHHHHHHHHTSCCCCSEECS------SEEEEECSSSEEEEEEHHHHHHHHSSCCCSSCCSCEEE
T ss_pred             CCccceEEEEEEcCCHHHHHHHHHHhcCCEeecCCC------CEEEEEcCCEEEEEEeccccccccCCCCCCCCCeEEEE
Confidence            567899999999999999999999999999876531      346677788888888653210000000 1135668999


Q ss_pred             EEE---CCHHHHHHHHHhCCCeEEeec----CCceEEEEEcCCCCeEEEEeec
Q 028083          168 IAI---RDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       168 f~V---~dv~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      |.|   +|+++++++|+++|+++..++    .|.+.+||+|||||.|||++.+
T Consensus        75 f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  127 (150)
T 3bqx_A           75 HNVRAETEVAPLMERLVAAGGQLLRPADAPPHGGLRGYVADPDGHIWEIAFNP  127 (150)
T ss_dssp             EECSSGGGHHHHHHHHHHTTCEEEEEEECCTTSSEEEEEECTTCCEEEEEECT
T ss_pred             EEeCCHHHHHHHHHHHHHCCCEEecCCcccCCCCEEEEEECCCCCEEEEEeCC
Confidence            999   799999999999999986432    3568999999999999999864

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=99.79  E-value=6.9e-19  Score=131.89  Aligned_cols=119  Identities=20%  Similarity=0.246  Sum_probs=88.4

Q ss_pred             eeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEE-CCeEEEEEecCCCC--CCCCCCCCCCcceEE
Q 028083           90 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPD--PLSGRPEHGGRDRHT  166 (214)
Q Consensus        90 ~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~-g~~~l~l~~~~~~~--~~~~~~~~g~g~~hi  166 (214)
                      |+++++|+.|.|.|++++++||++ |||++....+..    ..+++.. |+..+.+.......  .+...+..+++..|+
T Consensus         1 M~~~l~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~~~----~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l   75 (138)
T 2a4x_A            1 MSARISLFAVVVEDMAKSLEFYRK-LGVEIPAEADSA----PHTEAVLDGGIRLAWDTVETVRSYDPEWQAPTGGHRFAI   75 (138)
T ss_dssp             -CCEEEEEEEEESCHHHHHHHHHT-TTCCCCGGGGGC----SEEEEECTTSCEEEEEEHHHHHHHCTTCCCCBSSCSEEE
T ss_pred             CcceeeEEEEEECCHHHHHHHHHH-cCCcEEecCCCC----ceEEEEcCCCeEEEEecCccchhhCcccCCCCCCCeEEE
Confidence            457999999999999999999998 999987653311    1344555 66777777532100  000112234677899


Q ss_pred             EEEEC---CHHHHHHHHHhCCCeEEee----cCCceEEEEEcCCCCeEEEEeec
Q 028083          167 CIAIR---DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       167 af~V~---dv~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      +|.|+   |+++++++|+++|+++..+    ..|.+.+||+|||||.|||++..
T Consensus        76 ~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  129 (138)
T 2a4x_A           76 AFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRYAIVKDPDGNVVDLFAPL  129 (138)
T ss_dssp             EEECSSHHHHHHHHHHHHHTTCCEEEEEEEETTTEEEEEEECTTCCEEEEEEEC
T ss_pred             EEEeCCHHHHHHHHHHHHHCCCceeeCCcccCCCcEEEEEECCCCCEEEEEeCC
Confidence            99999   9999999999999997643    24568999999999999999865

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=99.79  E-value=3.6e-18  Score=127.03  Aligned_cols=111  Identities=23%  Similarity=0.262  Sum_probs=84.6

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEEEEC
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR  171 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V~  171 (214)
                      ++++||.|.|.|++++++||+++|||++....+      ..+++..++..+.+........+     ...+..|++|.++
T Consensus         8 ~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~------~~~~~~~~g~~~~l~~~~~~~~~-----~~~~~~h~~~~~~   76 (135)
T 3rri_A            8 NDVFHLAIPARDLDEAYDFYVTKLGCKLARRYP------DRITLDFFGDQLVCHLSDRWDRE-----VSMYPRHFGITFR   76 (135)
T ss_dssp             TSEEEEEEEESCHHHHHHHHTTTTCCEEEEEET------TEEEEEETTEEEEEEECSCSCSS-----CCSSSCEEEEECS
T ss_pred             CccceEEEEcCCHHHHHHHHHHhcCCEeeccCC------CcEEEEEeCCEEEEEEcCccccc-----CCCCCCeEEEEEc
Confidence            689999999999999999999999999975433      23456655655666554333211     2345689999996


Q ss_pred             ---CHHHHHHHHHhCCCeEEeec--------CCceEEEEEcCCCCeEEEEeec
Q 028083          172 ---DVSKLKMILDKAGISYTLSK--------SGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       172 ---dv~~~~~~l~~~G~~~~~~~--------~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                         |+++++++|+++|+++..++        .+.+.+||+|||||+|||+++.
T Consensus        77 ~~~d~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~~DPdGn~iel~~~~  129 (135)
T 3rri_A           77 DKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLIDPSNNLLEFKYYF  129 (135)
T ss_dssp             SHHHHHHHHHHHHHTTCCEEEEEEEESTTSTTCEEEEEEECTTCCEEEEEEES
T ss_pred             ChHhHHHHHHHHHHcCCceecCcccccCCCCCceEEEEEECCCCCEEEEEEEC
Confidence               59999999999999875321        2357899999999999999874

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=99.79  E-value=2.5e-18  Score=128.03  Aligned_cols=112  Identities=18%  Similarity=0.267  Sum_probs=81.6

Q ss_pred             eeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEE-ECCeEEEEEecCCCCCCCCCCCCCCcceEEEEE
Q 028083           91 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLW-VGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  169 (214)
Q Consensus        91 i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~-~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~  169 (214)
                      ...|+||.|.|.|++++++||++ |||++.......+   ..+++. .++..+.+.......      ...++..|++|.
T Consensus         4 ~~~i~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~~~~---~~~~~~~~~~~~l~l~~~~~~~------~~~~~~~~l~f~   73 (128)
T 3g12_A            4 SLLITSITINTSHLQGMLGFYRI-IGFQFTASKVDKG---SEVHRAVHNGVEFSLYSIQNPQ------RSQIPSLQLGFQ   73 (128)
T ss_dssp             CEEEEEEEEEESCHHHHHHHHHH-HTCCCEEC--------CCEEEEEETTEEEEEEECCCCS------SCCCCSEEEEEE
T ss_pred             cceEEEEEEEcCCHHHHHHHHHH-CCCEEecccCCCC---CEEEEEeCCCeEEEEEECCCCc------CCCCCceEEEEE
Confidence            46899999999999999999999 9999876422111   234555 578777775443211      112334689999


Q ss_pred             ECCHHHHHHHHHhCCCe-EEee----cCCceEEEEEcCCCCeEEEEeec
Q 028083          170 IRDVSKLKMILDKAGIS-YTLS----KSGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       170 V~dv~~~~~~l~~~G~~-~~~~----~~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      |+|+++++++++++|++ +..+    ..|.. ++|+|||||+|||.+.+
T Consensus        74 v~dvd~~~~~l~~~G~~~~~~~p~~~~~G~~-~~~~DPdGn~iel~~~~  121 (128)
T 3g12_A           74 ITDLEKTVQELVKIPGAMCILDPTDMPDGKK-AIVLDPDGHSIELCELE  121 (128)
T ss_dssp             ESCHHHHHHHHTTSTTCEEEEEEEECC-CEE-EEEECTTCCEEEEEC--
T ss_pred             eCCHHHHHHHHHHCCCceeccCceeCCCccE-EEEECCCCCEEEEEEec
Confidence            99999999999999999 6432    23455 99999999999999865

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=99.79  E-value=2e-18  Score=125.65  Aligned_cols=111  Identities=16%  Similarity=0.196  Sum_probs=84.7

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEEEEC
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR  171 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V~  171 (214)
                      ++++|+.|.|.|++++++||+++|||++....+      ..+++..|+..+.+...  ...+.  ...+.+ .|++|.|+
T Consensus         4 m~i~~v~l~v~D~~~a~~FY~~~lG~~~~~~~~------~~~~~~~~~~~l~l~~~--~~~~~--~~~~~~-~~~~~~v~   72 (118)
T 2i7r_A            4 MNLNQLDIIVSNVPQVCADLEHILDKKADYAND------GFAQFTIGSHCLMLSQN--HLVPL--ENFQSG-IIIHIEVE   72 (118)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET------TEEEEEETTEEEEEESS--CSSSC--CCCCSC-EEEEEECS
T ss_pred             ceeeEEEEEeCCHHHHHHHHHHHhCCeeEEeCC------CEEEEEeCCeEEEEEcC--CCCCc--ccCCCe-EEEEEEEC
Confidence            589999999999999999999999999875432      14567888776654321  11111  112344 48999999


Q ss_pred             CHHHHHHHHHhCCCeEEee----cCCceEEEEEcCCCCeEEEEeec
Q 028083          172 DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       172 dv~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      |+++++++|+++|+++..+    ..|.+.++|+|||||.|||++..
T Consensus        73 d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  118 (118)
T 2i7r_A           73 DVDQNYKRLNELGIKVLHGPTVTDWGTESLLVQGPAGLVLDFYRMK  118 (118)
T ss_dssp             CHHHHHHHHHHHTCCEEEEEEECTTSCEEEEEECGGGCEEEEEECC
T ss_pred             CHHHHHHHHHHCCCceecCCccccCccEEEEEECCCccEEEEEecC
Confidence            9999999999999997533    24568999999999999999863

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=99.79  E-value=2.3e-18  Score=131.56  Aligned_cols=115  Identities=18%  Similarity=0.190  Sum_probs=85.1

Q ss_pred             eeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEE-CCeEEEEEecCCCCCCCCCCCCCCcceEEEE
Q 028083           90 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  168 (214)
Q Consensus        90 ~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~-g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf  168 (214)
                      |+.+++||.|.|.|++++++||+++|||++....+      ..+++.. ++..+.++........   ....++..|++|
T Consensus         3 m~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~------~~~~~~~~~g~~l~l~~~~~~~~~---~~~~~~~~~l~f   73 (148)
T 3rhe_A            3 MLSDPNLVLFYVKNPAKSEEFYKNLLDTQPIESSP------TFAMFVMKTGLRLGLWAQEEIEPK---AHQTGGGMELSF   73 (148)
T ss_dssp             ----CEEEEEEESCHHHHHHHHHHHHTCCCSEECS------SEEEEECTTSCEEEEEEGGGCSSC---CC----CEEEEE
T ss_pred             ccccccEEEEEeCCHHHHHHHHHHHcCCEEeccCC------CEEEEEcCCCcEEEEecCCcCCcc---ccCCCCeEEEEE
Confidence            45799999999999999999999999999886532      2456776 6777887765432211   122345579999


Q ss_pred             EECC---HHHHHHHHHhCCCeEEeec---CCceEEEEEcCCCCeEEEEeec
Q 028083          169 AIRD---VSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       169 ~V~d---v~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      .|+|   +++++++|+++|+++..++   ..++.++|+|||||+|||++..
T Consensus        74 ~v~d~~dvd~~~~~l~~~G~~i~~~p~~~~~G~~~~~~DPdG~~iel~~~~  124 (148)
T 3rhe_A           74 QVNSNEMVDEIHRQWSDKEISIIQPPTQMDFGYTFVGVDPDEHRLRIFCLK  124 (148)
T ss_dssp             ECSCHHHHHHHHHHHHHTTCCEEEEEEEETTEEEEEEECTTCCEEEEEEEC
T ss_pred             EcCCHHHHHHHHHHHHhCCCEEEeCCeecCCCcEEEEECCCCCEEEEEEcC
Confidence            9987   9999999999999985332   2248899999999999999865

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=99.79  E-value=2.3e-18  Score=135.35  Aligned_cols=125  Identities=16%  Similarity=0.205  Sum_probs=90.6

Q ss_pred             ceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEEC-------------------CeEEEEEecCC
Q 028083           89 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-------------------AEMIHLMELPN  149 (214)
Q Consensus        89 ~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g-------------------~~~l~l~~~~~  149 (214)
                      +.+.+++|+.|.|.|++++++||+++|||++.......+......++..+                   +..++++....
T Consensus        27 ~~~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~L~~~~~  106 (184)
T 2za0_A           27 TKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWG  106 (184)
T ss_dssp             GTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETT
T ss_pred             ccceeEEEEEEEeCCHHHHHHHHHHhcCCEEEEeccCCCCCceeEEecccccccCCcccchheeeecCCCceEEEEecCC
Confidence            44679999999999999999999999999998643222223334445542                   35777876533


Q ss_pred             CC-CCCC-C---CCCCCcceEEEEEECCHHHHHHHHHhCCCeEEeec---CCceEEEEEcCCCCeEEEEeec
Q 028083          150 PD-PLSG-R---PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       150 ~~-~~~~-~---~~~g~g~~hiaf~V~dv~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      .. .+.. .   .....+..|++|.|+|+++++++|+++|+++...+   .+++.+||+|||||.|||++..
T Consensus       107 ~~~~~~~~~~~~~~~~~g~~hi~f~v~dvd~~~~~l~~~G~~~~~~p~~~~~~~~~~~~DPdG~~iel~~~~  178 (184)
T 2za0_A          107 TEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPN  178 (184)
T ss_dssp             GGGCTTCCCCCSSSSSCCEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSSTTCEEEECTTCCEEEEECTT
T ss_pred             CCCCcccccccCCCCCCCeeEEEEEeCCHHHHHHHHHHCCCeeecCCcCCCceeEEEEECCCCCEEEEEecC
Confidence            11 1110 0   11125678999999999999999999999987543   2356799999999999999854

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A

Probab=99.79  E-value=6.5e-18  Score=124.54  Aligned_cols=111  Identities=11%  Similarity=0.120  Sum_probs=86.2

Q ss_pred             ceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEE
Q 028083           89 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  168 (214)
Q Consensus        89 ~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf  168 (214)
                      ||.....|+.|.|.|++++++||+++|||++....+      ..+++..|+..+.+......        ..++..|++|
T Consensus         1 m~~~~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~--------~~~~~~~~~~   66 (124)
T 1xrk_A            1 MAKLTSAVPVLTARDVAEAVEFWTDRLGFSRVFVED------DFAGVVRDDVTLFISAVQDQ--------VVPDNTQAWV   66 (124)
T ss_dssp             -CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS------SEEEEEETTEEEEEEECSCT--------TTGGGCEEEE
T ss_pred             CCcccceeEEEEcCCHHHHHHHHHHccCceEEecCC------CEEEEEECCEEEEEEcCCCC--------CCCCceEEEE
Confidence            344567899999999999999999999999986521      23567788888888765332        1123479999


Q ss_pred             EECCHHHHHHHHHhC------CC--eEEeec---CCceEEEEEcCCCCeEEEEeec
Q 028083          169 AIRDVSKLKMILDKA------GI--SYTLSK---SGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       169 ~V~dv~~~~~~l~~~------G~--~~~~~~---~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      .|+|+++++++++++      |+  ++..++   ..++.++|+|||||.|||++..
T Consensus        67 ~v~dv~~~~~~l~~~~~~~~~G~~~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~~  122 (124)
T 1xrk_A           67 WVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWGREFALRDPAGNCVHFVAEE  122 (124)
T ss_dssp             EEECHHHHHHHHTTTSBSCTTTCSSCEECCCEEETTEEEEEEECTTCCEEEEEEC-
T ss_pred             EECCHHHHHHHHHHhcccccCCccccccCCceecCCCCEEEEECCCCCEEEEEEec
Confidence            999999999999999      99  765332   2238999999999999999864

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=99.78  E-value=2.3e-18  Score=130.97  Aligned_cols=119  Identities=19%  Similarity=0.242  Sum_probs=91.0

Q ss_pred             cceeeeEeEEEEEcCCHHHHHHHH---HHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcce
Q 028083           88 DYGVVSVHHVGILCENLERSLEFY---QNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDR  164 (214)
Q Consensus        88 ~~~i~~i~HV~l~V~D~~~a~~FY---~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~  164 (214)
                      .+++.+++||.|.|.|++++++||   +++|||++....+.     ...|+. |+..+.|+................+..
T Consensus        15 ~~~~~~i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~~~-----~~~~~~-g~~~l~l~~~~~~~~~~~~~~~~~g~~   88 (146)
T 3ct8_A           15 LYFQGMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWSR-----GKSYKH-GKTYLVFVQTEDRFQTPTFHRKRTGLN   88 (146)
T ss_dssp             TTTTTSCCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEETT-----EEEEEE-TTEEEEEEECCGGGSCSCCCTTSSSCC
T ss_pred             cccccceeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEecCC-----CceEec-CCeEEEEEEcCCCcccccccccCCCce
Confidence            556689999999999999999999   99999999865431     124666 888888887643110000111235678


Q ss_pred             EEEEEEC---CHHHHHHHHHhCCCeEEee-c------CCceEEEEEcCCCCeEEEEee
Q 028083          165 HTCIAIR---DVSKLKMILDKAGISYTLS-K------SGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       165 hiaf~V~---dv~~~~~~l~~~G~~~~~~-~------~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      |++|.|+   |+++++++|+++|+++..+ +      .+.+.+||+|||||.|||+++
T Consensus        89 hi~f~v~~~~dv~~~~~~l~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~p  146 (146)
T 3ct8_A           89 HLAFHAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHYAVFCEDPNRIKVEIVAP  146 (146)
T ss_dssp             EEEEECSCHHHHHHHHHHHHHHTCCBCCTTTTTCTTCTTCCEEEEECTTCCEEEEECC
T ss_pred             EEEEECCCHHHHHHHHHHHHHcCCccccCCCccccCCCceEEEEEECCCCCEEEEEeC
Confidence            9999999   9999999999999998652 1      136789999999999999874

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}

Probab=99.78  E-value=1.1e-17  Score=124.90  Aligned_cols=115  Identities=19%  Similarity=0.237  Sum_probs=86.8

Q ss_pred             eEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcce-EEEEEECCH
Q 028083           95 HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDR-HTCIAIRDV  173 (214)
Q Consensus        95 ~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~-hiaf~V~dv  173 (214)
                      -.+.|.|.|++++++||+++|||++....+.+ .....+.+..++..+.+.........   ...++... |++|.|+|+
T Consensus         4 ~~i~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-g~~~~~~l~~~~~~l~l~~~~~~~~~---~~~~~~~~~~~~~~v~dv   79 (137)
T 3itw_A            4 MVVELAYTDPDRAVDWLVRVFGFRLLLRQPAI-GTIRHADLDTGGGIVMVRRTGEPYTV---SCAGGHTCKQVIVWVSDV   79 (137)
T ss_dssp             CEEEEEESCHHHHHHHHHHHHCCEEEEEESSS-SSCSEEEEECSSSEEEEEETTCCSSC---EECCCCCCCEEEEEESCH
T ss_pred             EEEEEEECCHHHHHHHHHHccCCEEEEEecCC-CcEEEEEEecCCeEEEEEecCCCcCc---cCCCCCcEEEEEEEeCCH
Confidence            35889999999999999999999998765433 23334557778877877664322111   11222334 999999999


Q ss_pred             HHHHHHHHhCCCeEEee----cCCceEEEEEcCCCCeEEEEeec
Q 028083          174 SKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       174 ~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      ++++++|+++|+++..+    ..|.+.++|+|||||.|||++..
T Consensus        80 ~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  123 (137)
T 3itw_A           80 DEHFMRSTAAGADIVQPLQDKPWGLRQYLVRDLEGHLWEFTRHL  123 (137)
T ss_dssp             HHHHHHHHHTTCEEEEEEEEETTTEEEEEEECSSSCEEEEEECC
T ss_pred             HHHHHHHHHcCCeeccCccccCCCcEEEEEECCCCCEEEEEEEc
Confidence            99999999999997543    24678999999999999999863

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=99.77  E-value=4.6e-18  Score=129.05  Aligned_cols=114  Identities=16%  Similarity=0.229  Sum_probs=88.0

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEEC-CeEEEEEecCCCCCCCCCCCCCCcceEEEEEE
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  170 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g-~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V  170 (214)
                      .+++||.|.|.|++++++||+++|||++....+      ..+++..+ +..+.++.......   .+..+++..|++|.|
T Consensus        24 ~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~------~~~~~~~~~~~~l~l~~~~~~~~---~~~~~~~~~hl~f~v   94 (144)
T 2kjz_A           24 THPDFTILYVDNPPASTQFYKALLGVDPVESSP------TFSLFVLANGMKLGLWSRHTVEP---KASVTGGGGELAFRV   94 (144)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHTCCCSEEET------TEEEEECTTSCEEEEEETTSCSS---CCCCSSSSCEEEEEC
T ss_pred             CceeEEEEEeCCHHHHHHHHHHccCCEeccCCC------CeEEEEcCCCcEEEEEeCCCCCC---ccCCCCCceEEEEEe
Confidence            499999999999999999999999999876542      13567775 46777765433211   122345778999999


Q ss_pred             C---CHHHHHHHHHhCCCeEEeec---CCceEEEEEcCCCCeEEEEeecC
Q 028083          171 R---DVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVDG  214 (214)
Q Consensus       171 ~---dv~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdG~~iEl~~~~~  214 (214)
                      +   |+++++++|+++|+++..++   ..++.+||+|||||.|||++..+
T Consensus        95 ~d~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~~g  144 (144)
T 2kjz_A           95 ENDAQVDETFAGWKASGVAMLQQPAKMEFGYTFTAADPDSHRLRVYAFAG  144 (144)
T ss_dssp             SSHHHHHHHHHHHHHTTCCCCSCCEEETTEEEEEECCTTCCEEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHCCCeEecCceecCCceEEEEECCCCCEEEEEecCC
Confidence            8   58999999999999875332   23588999999999999998753

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}

Probab=99.76  E-value=2.5e-18  Score=131.22  Aligned_cols=120  Identities=13%  Similarity=0.109  Sum_probs=86.1

Q ss_pred             cceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCC--CCCCCCcceE
Q 028083           88 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG--RPEHGGRDRH  165 (214)
Q Consensus        88 ~~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~--~~~~g~g~~h  165 (214)
                      +-|..+++||.|.|.|++++++||+++|||++... +.    ...+++..++..+.|+....+.....  ......+ .|
T Consensus        20 ~gM~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~-~~----~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g-~~   93 (148)
T 2r6u_A           20 QGMTGRIVHFEIPFDDGDRARAFYRDAFGWAIAEI-PD----MDYSMVTTGPVGESGMPDEPGYINGGMMQRGEVTT-PV   93 (148)
T ss_dssp             STTCCCEEEEEEEESSHHHHHHHHHHHHCCEEEEE-TT----TTEEEEECSCBCTTSSBCSSSCBCEEEEESSSSCS-CE
T ss_pred             cccCCceEEEEEEeCCHHHHHHHHHHccCcEEEEC-CC----CCEEEEEeCCcceeecccCCcccccceeecCCCCe-EE
Confidence            34457999999999999999999999999999863 21    13466777765433332221111000  0001134 49


Q ss_pred             EEEEECCHHHHHHHHHhCCCeEEeec---C-CceEEEEEcCCCCeEEEEeec
Q 028083          166 TCIAIRDVSKLKMILDKAGISYTLSK---S-GRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       166 iaf~V~dv~~~~~~l~~~G~~~~~~~---~-g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      ++|.|+|+++++++|+++|+++..++   . .++.+||+|||||.|||++..
T Consensus        94 l~f~v~dld~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~~  145 (148)
T 2r6u_A           94 VTVDVESIESALERIESLGGKTVTGRTPVGNMGFAAYFTDSEGNVVGLWETA  145 (148)
T ss_dssp             EEEECSCHHHHHHHHHHTTCEEEEEEEEETTTEEEEEEECTTSCEEEEEEEC
T ss_pred             EEEEcCCHHHHHHHHHHcCCeEecCCeecCCCEEEEEEECCCCCEEEEEecC
Confidence            99999999999999999999986432   3 258999999999999999875

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=99.76  E-value=3.8e-18  Score=124.08  Aligned_cols=109  Identities=17%  Similarity=0.209  Sum_probs=82.2

Q ss_pred             cceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEEC---CeEEEEEecCCCCCCCCCCCCCCcce
Q 028083           88 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG---AEMIHLMELPNPDPLSGRPEHGGRDR  164 (214)
Q Consensus        88 ~~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g---~~~l~l~~~~~~~~~~~~~~~g~g~~  164 (214)
                      .|.+.++ |+.|.|+|++++.+||+++|||++... +  +   ..+++..+   +..+.+.....         ..++..
T Consensus         3 ~m~i~~i-~v~l~v~d~~~a~~FY~~~lG~~~~~~-~--~---~~~~~~~~~~~~~~l~l~~~~~---------~~~~~~   66 (119)
T 2pjs_A            3 HMAVRRV-VANIATPEPARAQAFYGDILGMPVAMD-H--G---WIVTHASPLEAHAQVSFAREGG---------SGTDVP   66 (119)
T ss_dssp             --CEEEE-EEEEECSCGGGGHHHHTTTTCCCEEEE-C--S---SEEEEEEEEEEEEEEEEESSSB---------TTBCCC
T ss_pred             ccceeEE-EEEEEcCCHHHHHHHHHHhcCCEEEec-C--C---EEEEEecCCCCcEEEEEEcCCC---------CCCcee
Confidence            3567889 999999999999999999999998864 1  1   23445554   23444443211         123457


Q ss_pred             EEEEEECCHHHHHHHHHhCCCeEEee----cCCceEEEEEcCCCCeEEEEee
Q 028083          165 HTCIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       165 hiaf~V~dv~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      |++|.|+|+++++++|+++|+++..+    ..|.+.+|++|||||.|||++.
T Consensus        67 ~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~  118 (119)
T 2pjs_A           67 DLSIEVDNFDEVHARILKAGLPIEYGPVTEAWGVQRLFLRDPFGKLINILSH  118 (119)
T ss_dssp             SEEEEESCHHHHHHHHHHTTCCCSEEEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred             EEEEEECCHHHHHHHHHHCCCccccCCccCCCccEEEEEECCCCCEEEEEec
Confidence            99999999999999999999987432    2356899999999999999985

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=99.75  E-value=6.2e-18  Score=122.00  Aligned_cols=107  Identities=16%  Similarity=0.214  Sum_probs=83.2

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEEC-CeEEEEEecCCCCCCCCCCCCCCcceEEEEEE
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  170 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g-~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V  170 (214)
                      ++++||.|.|.|++++.+||+++|||++.....   .  ..+|+..+ +..+.+.......        .++..|++|.|
T Consensus         2 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~---~--~~~~~~~~~~~~l~l~~~~~~~--------~~~~~~~~~~v   68 (113)
T 1xqa_A            2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRG---N--AFAVMRDNDGFILTLMKGKEVQ--------YPKTFHVGFPQ   68 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEET---T--TEEEEECTTCCEEEEEECSSCC--------CCTTCCEEEEC
T ss_pred             CeeEEEEEEeCCHHHHHHHHHHhCCCEEeccCC---C--cEEEEEcCCCcEEEEEeCCCCC--------CCceeEEEEEc
Confidence            478999999999999999999999999986421   1  23667664 4567776543211        24578999999


Q ss_pred             ---CCHHHHHHHHHhCCCeEEeec-CCceEEEEEcCCCCeEEEEe
Q 028083          171 ---RDVSKLKMILDKAGISYTLSK-SGRPAIFTRDPDANALEFTQ  211 (214)
Q Consensus       171 ---~dv~~~~~~l~~~G~~~~~~~-~g~~~~~~~DPdG~~iEl~~  211 (214)
                         +|+++++++++++|+++..+. .+++.+|++|||||.|||+.
T Consensus        69 ~~~~d~~~~~~~l~~~G~~~~~p~~~~~~~~~~~DPdG~~iel~~  113 (113)
T 1xqa_A           69 ESEEQVDKINQRLKEDGFLVEPPKHAHAYTFYVEAPGGFTIEVMC  113 (113)
T ss_dssp             SSHHHHHHHHHHHHHTTCCCCCCEEC-CEEEEEEETTTEEEEEEC
T ss_pred             CCHHHHHHHHHHHHHCCCEEecCcCCCcEEEEEECCCCcEEEEeC
Confidence               799999999999999875332 23689999999999999973

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=99.75  E-value=1.3e-17  Score=126.56  Aligned_cols=119  Identities=13%  Similarity=0.133  Sum_probs=81.6

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCC---CCCCCCCCCCCcceEEEE
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP---DPLSGRPEHGGRDRHTCI  168 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~---~~~~~~~~~g~g~~hiaf  168 (214)
                      .+|.||.|.|.|+++|++||++ ||+..........   ...+...++..+.+......   .........+.+..|++|
T Consensus         8 ~rl~~V~L~V~Dl~~s~~FY~~-lg~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~   83 (149)
T 4gym_A            8 SRLTFVNLPVADVAASQAFFGT-LGFEFNPKFTDES---CACMVVSEQAFVMLIDRARFADFTSKPIADATATTEAIVCV   83 (149)
T ss_dssp             CCCEEEEEEESCHHHHHHHHHH-TTCEECGGGCBTT---EEEEEEETTEEEEEEEHHHHGGGCSSCBCCTTTCBSCEEEE
T ss_pred             ccEEEEEEEeCCHHHHHHHHHH-hCCCcceeecCCc---eeEEeecCcceEeeeccccccccccccCCCCCCCCeeEEEE
Confidence            6899999999999999999998 6666654332211   22333445544444432111   010111223455579999


Q ss_pred             EEC---CHHHHHHHHHhCCCeEEeec---CCceEEEEEcCCCCeEEEEeecC
Q 028083          169 AIR---DVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVDG  214 (214)
Q Consensus       169 ~V~---dv~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdG~~iEl~~~~~  214 (214)
                      .|+   +++++++++.+.|+.+..++   .+++.+||+|||||+|||+.+++
T Consensus        84 ~v~~~~~vd~~~~~~~~~g~~~~~~p~~~~~~~~~~f~DPDGn~iEi~~~~p  135 (149)
T 4gym_A           84 SAIDRDDVDRFADTALGAGGTVARDPMDYGFMYGRSFHDLDGHLWEVMWMSA  135 (149)
T ss_dssp             ECSSHHHHHHHHHHHHHTTCEECSCCEECSSEEEEEEECTTCCEEEEEEECT
T ss_pred             EeccHHHHHHHHHHHHhcCceeeccccccCCEEEEEEEcCCCCEEEEEEECh
Confidence            997   68899999999999986432   45789999999999999997653

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0

Probab=99.75  E-value=3.3e-17  Score=122.42  Aligned_cols=111  Identities=22%  Similarity=0.273  Sum_probs=82.7

Q ss_pred             eEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEEEECC
Q 028083           93 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD  172 (214)
Q Consensus        93 ~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V~d  172 (214)
                      .--+..|.|.|++++++||+++|||++....+      ..+++..|+..+.+........   .+. +.+..|++|.|+|
T Consensus         7 ~~~~~~l~v~D~~~a~~FY~~~LG~~~~~~~~------~~~~l~~~~~~l~l~~~~~~~~---~~~-~~~~~~l~~~v~d   76 (134)
T 3fcd_A            7 HQITPFLHIPDMQEALTLFCDTLGFELKYRHS------NYAYLELSGCGLRLLEEPARKI---IPD-GIARVAICIDVSD   76 (134)
T ss_dssp             CEEEEEEEESCHHHHHHHHTTTTCCEEEEEET------TEEEEEETTEEEEEEECCCC-------------EEEEEECSC
T ss_pred             hcceeEEEECCHHHHHHHHHhccCcEEEEeCC------CeEEEEECCEEEEEEeCCCCCc---CCC-CCceEEEEEEeCC
Confidence            44567899999999999999999999987643      2467888888888877654311   111 2233799999999


Q ss_pred             HHHHHHHHHhCCC----eEE----eecCCceEEEEEcCCCCeEEEEeec
Q 028083          173 VSKLKMILDKAGI----SYT----LSKSGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       173 v~~~~~~l~~~G~----~~~----~~~~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      +++++++|+++|+    ++.    ....|.+.++|+|||||.|||.+..
T Consensus        77 v~~~~~~l~~~g~~~g~~i~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  125 (134)
T 3fcd_A           77 IDSLHTKLSPALENLPADQVEPLKNMPYGQREFQVRMPDGDWLNFTAPL  125 (134)
T ss_dssp             HHHHHHHHHHHHTTSCGGGEEEEEECTTSEEEEEEECTTSCEEEEEEEC
T ss_pred             HHHHHHHHHhcCCccCCccccCCcccCCCcEEEEEECCCCCEEEEEEcc
Confidence            9999999996654    322    2234668999999999999999865

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}

Probab=99.75  E-value=3.2e-17  Score=123.13  Aligned_cols=114  Identities=18%  Similarity=0.143  Sum_probs=84.8

Q ss_pred             eEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEec-----CCCCCCCCCCCCCCcceEEE
Q 028083           93 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMEL-----PNPDPLSGRPEHGGRDRHTC  167 (214)
Q Consensus        93 ~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~-----~~~~~~~~~~~~g~g~~hia  167 (214)
                      +++||.|.|+|++++++||+++|||++....+..    ...++..++..+.+...     .....+  ....+.+ .|++
T Consensus         8 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~----~~~~~~~~~~~l~l~~~~~~~~~~~~~~--~~~~~~~-~~~~   80 (141)
T 2rbb_A            8 DLSYVNIFTRDIVAMSAFYQQVFGFQEIESIRSP----IFRGLDTGKSCIGFNAHEAYELMQLAQF--SETSGIK-FLLN   80 (141)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEECGGGCBT----TEEEEECSSSEEEEECTHHHHHTTCGGG--CCCBSCC-EEEE
T ss_pred             cccEEEEEECCHHHHHHHHHHhcCCeeecccCCC----ceEEeecCCEEEEEcCcccccccccccc--CCCCCCe-EEEE
Confidence            8999999999999999999999999997543211    13456667766666442     111001  0112344 4999


Q ss_pred             EEEC---CHHHHHHHHHhCCCeEEeec----CCceEEEEEcCCCCeEEEEeec
Q 028083          168 IAIR---DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       168 f~V~---dv~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      |.|+   |+++++++|+++|+++..++    .|.+.+||+|||||.|||++..
T Consensus        81 f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  133 (141)
T 2rbb_A           81 FDVDTKEAVDKLVPVAIAAGATLIKAPYETYYHWYQAVLLDPERNVFRINNVL  133 (141)
T ss_dssp             EECSCHHHHHHHHHHHHHTTCEEEEEEEECTTSEEEEEEECTTSCEEEEEEEC
T ss_pred             EEcCCHHHHHHHHHHHHHcCCeEecCccccCCccEEEEEECCCCCEEEEEEcc
Confidence            9999   59999999999999975432    4578999999999999999865

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.74  E-value=5.8e-17  Score=139.62  Aligned_cols=116  Identities=14%  Similarity=0.183  Sum_probs=89.8

Q ss_pred             cceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCe--EEEEEecCCCCCCCCCCCCCCcceE
Q 028083           88 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRH  165 (214)
Q Consensus        88 ~~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~--~l~l~~~~~~~~~~~~~~~g~g~~h  165 (214)
                      .+.+.+++||+|.|+|++++.+||+++|||++..... ........|+..++.  .+.+.....+        ..++++|
T Consensus       148 g~~~~~l~Hv~l~v~D~~~a~~FY~~vLG~~~~~~~~-~~g~~~~~~l~~~~~~~~l~~~~~~~~--------~~~~~~H  218 (339)
T 3lm4_A          148 GIPVKRIDHLNLMSSDVTAVKDSFERHLGFRTTERVV-DGNVEIGAWMSSNLLGHEVACMRDMTG--------GHGKLHH  218 (339)
T ss_dssp             SSCCCEEEEEEEEESCHHHHHHHHHHHHCCEEEEEEE-ETTEEEEEEEESSSSSCSEEEEECTTS--------CCSEEEE
T ss_pred             CCCcceeeeEEEEcCCHHHHHHHHHHhCCCeEEEEEe-cCCcEEEEEEEeCCCceEEEEeccCCC--------CCCceeE
Confidence            4567999999999999999999999999999986543 223345677877653  4555542111        2356899


Q ss_pred             EEEEECC---HHHHHHHHHhCCCeEEeec-----CCceEEEEEcCCCCeEEEEee
Q 028083          166 TCIAIRD---VSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       166 iaf~V~d---v~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      ++|+|+|   +++++++|+++|+++..++     .+.+++||+|||||+|||++.
T Consensus       219 iaf~v~d~~~v~~~~~~l~~~G~~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~  273 (339)
T 3lm4_A          219 LAFFYGTGQHNIDAVEMFRDYDIQIEAGPDKHGITQSQFLYVFEPGGNRIELFGE  273 (339)
T ss_dssp             EEEECCCHHHHHHHHHHHHHTTCEEEEEEEEETGGGEEEEEEECTTSCEEEEECC
T ss_pred             EEEEeCCHHHHHHHHHHHHHCCCeEEeCCcccccCCceEEEEEcCCCCEEEEEEc
Confidence            9999998   8899999999999986432     235789999999999999853

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=99.74  E-value=1.5e-17  Score=126.49  Aligned_cols=114  Identities=14%  Similarity=0.241  Sum_probs=83.3

Q ss_pred             ceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEE
Q 028083           89 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  168 (214)
Q Consensus        89 ~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf  168 (214)
                      |.++++. +.|.|.|++++++||+++|||++.......+...  .....++  +.++.......      ...+..|++|
T Consensus         3 M~i~~i~-i~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~--~~~~~~~--~~l~~~~~~~~------~~~~~~hl~f   71 (144)
T 3r6a_A            3 MKILQIL-SRLYVADLNPALEFYEELLETPVAMRFEIPQTGV--ELAQIST--ILLIAGSEEAL------KPFRNTQATF   71 (144)
T ss_dssp             CCEEEEE-EEEEESCHHHHHHHHHHHTTCCCCEECCCSCSSC--EEEEETT--EEEEESCHHHH------GGGGGCCEEE
T ss_pred             EEEEEEE-EEEEECCHHHHHHHHHHhcCCEEEEEeccCCccE--EEEEecc--EEEecCCcccC------CCCcceEEEE
Confidence            3467777 9999999999999999999999876543222222  2234455  55554321110      1124589999


Q ss_pred             EECCHHHHHHHHHhCCCeEEeec---CCceEEEEEcCCCCeEEEEeec
Q 028083          169 AIRDVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       169 ~V~dv~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      .|+|+++++++|+++|+++..++   ..++.+||+|||||.|||++..
T Consensus        72 ~V~d~d~~~~~l~~~G~~v~~~p~~~~~G~~~~~~DPdG~~iel~~~~  119 (144)
T 3r6a_A           72 LVDSLDKFKTFLEENGAEIIRGPSKVPTGRNMTVRHSDGSVIEYVEHS  119 (144)
T ss_dssp             EESCHHHHHHHHHHTTCEEEEEEEEETTEEEEEEECTTSCEEEEEEEC
T ss_pred             EeCCHHHHHHHHHHcCCEEecCCccCCCceEEEEECCCCCEEEEEEcC
Confidence            99999999999999999986432   3358899999999999999864

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A

Probab=99.74  E-value=1.4e-16  Score=117.49  Aligned_cols=107  Identities=19%  Similarity=0.245  Sum_probs=84.1

Q ss_pred             eEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEEEECC
Q 028083           93 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD  172 (214)
Q Consensus        93 ~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V~d  172 (214)
                      ...++.|.|.|++++++||++ |||++....+      ..+++..|+..+.+.......       ..++..|++|.|+|
T Consensus         3 ~~~~~~l~v~D~~~a~~FY~~-LG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~~-------~~~~~~~~~~~v~d   68 (126)
T 1ecs_A            3 DQATPNLPSRDFDSTAAFYER-LGFGIVFRDA------GWMILQRGDLMLEFFAHPGLD-------PLASWFSCCLRLDD   68 (126)
T ss_dssp             CEEEEEEEESCHHHHHHHHHT-TTCEEEEECS------SEEEEEETTEEEEEEECTTCC-------GGGCCCEEEEEESC
T ss_pred             ccEEEEEEeCCHHHHHHHHHH-CCCEEEecCC------CEEEEEeCCEEEEEEeCCCCC-------CCCcceEEEEEECC
Confidence            346899999999999999998 9999986521      245678888888887643311       12356799999999


Q ss_pred             HHHHHHHHHhCCCeE-------E-ee---cCCceEEEEEcCCCCeEEEEeec
Q 028083          173 VSKLKMILDKAGISY-------T-LS---KSGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       173 v~~~~~~l~~~G~~~-------~-~~---~~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      +++++++++++|+++       . .+   ..|.+.++++|||||.|||++..
T Consensus        69 v~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  120 (126)
T 1ecs_A           69 LAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLLRLIQNE  120 (126)
T ss_dssp             HHHHHHHHHHTTCCBCSSSSSEEEEEEECTTSSEEEEEECTTSCEEEEEECC
T ss_pred             HHHHHHHHHHCCCccccccCccccCCcccCcccEEEEEECCCCCEEEEecch
Confidence            999999999999983       3 22   23568999999999999999864

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A

Probab=99.74  E-value=2.3e-17  Score=121.20  Aligned_cols=106  Identities=16%  Similarity=0.159  Sum_probs=83.0

Q ss_pred             eEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEEEECC
Q 028083           93 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD  172 (214)
Q Consensus        93 ~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V~d  172 (214)
                      .-.++.|.|.|++++++||+++|||++....+      ..+++..++..+++.......       . ++..|++|.|+|
T Consensus         5 ~~~~~~l~v~D~~~a~~FY~~~LG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~~-------~-~~~~~~~~~v~d   70 (122)
T 1qto_A            5 LGAVPVLTAVDVPANVSFWVDTLGFEKDFGDR------DFAGVRRGDIRLHISRTEHQI-------V-ADNTSAWIEVTD   70 (122)
T ss_dssp             CCCCCEEEESSHHHHHHHHHHTTCCEEEEECS------SEEEEEETTEEEEEEECSCHH-------H-HTTCEEEEEESC
T ss_pred             cceeEEEEcCCHHHHHHHHHhccCcEEeeCCC------CEEEEEECCEEEEEEcCCCCC-------C-CCceEEEEEECC
Confidence            44578999999999999999999999986521      246678888888887543211       1 123699999999


Q ss_pred             HHHHHHHHHhC------CC--eEEeec---CCceEEEEEcCCCCeEEEEee
Q 028083          173 VSKLKMILDKA------GI--SYTLSK---SGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       173 v~~~~~~l~~~------G~--~~~~~~---~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      +++++++++++      |+  ++..++   ..++.++|+|||||.|||++.
T Consensus        71 vd~~~~~l~~~~~~~~~G~~~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~  121 (122)
T 1qto_A           71 PDALHEEWARAVSTDYADTSGPAMTPVGESPAGREFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             HHHHHHHHTTTSCSCTTCTTSCEECCCEEETTEEEEEEECTTSCEEEEEEC
T ss_pred             HHHHHHHHHhhccccccCccccccCCCcCCCCCcEEEEECCCCCEEEEecC
Confidence            99999999999      99  765332   223889999999999999985

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.73  E-value=9.6e-17  Score=138.40  Aligned_cols=122  Identities=16%  Similarity=0.257  Sum_probs=92.1

Q ss_pred             ceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCC-CCceEEEEEEC----CeEEEEEecCCCCCCCCCCCCCCcc
Q 028083           89 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK-LPYRGAWLWVG----AEMIHLMELPNPDPLSGRPEHGGRD  163 (214)
Q Consensus        89 ~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~-~~~~~~~l~~g----~~~l~l~~~~~~~~~~~~~~~g~g~  163 (214)
                      +++++|+||.|.|.|++++.+||+++|||++........ ......|+..+    +..+.++..+...  ...+ ..+++
T Consensus         4 ~~i~~i~Hv~l~v~Dl~~s~~FY~~vLGl~~v~~~~~~~~~~~~~l~~~~~~g~~g~~l~l~~~~~~~--~~~~-~~~~~   80 (335)
T 3oaj_A            4 KKTMGIHHITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYFGNEGGKPGTIITFFPWAGAR--QGVI-GDGQV   80 (335)
T ss_dssp             CCCCSEEEEEEEESCHHHHHHHHTTTTCCEEEEEEECSSCTTSEEEEEESTTCCTTSEEEEEECTTCC--BCBC-CBSEE
T ss_pred             ccCCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeecCCCCCceEEEEEecCCCCCCcEEEEEECCCCC--CCCC-CCCce
Confidence            467899999999999999999999999999987643221 22223344332    4578887764331  1111 23467


Q ss_pred             eEEEEEEC--CHHHHHHHHHhCCCeEEe-ecCCceEEEEEcCCCCeEEEEeec
Q 028083          164 RHTCIAIR--DVSKLKMILDKAGISYTL-SKSGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       164 ~hiaf~V~--dv~~~~~~l~~~G~~~~~-~~~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      .|+||.|+  |+++++++|+++|+++.. ...+.+.+||+|||||.|||++..
T Consensus        81 ~hiaf~V~~~dl~~~~~rL~~~Gv~~~~~~~~g~~~~~f~DPdGn~iEl~~~~  133 (335)
T 3oaj_A           81 GVTSYVVPKGAMAFWEKRLEKFNVPYTKIERFGEQYVEFDDPHGLHLEIVERE  133 (335)
T ss_dssp             EEEEEEECTTCHHHHHHHHHHTTCCCEEEEETTEEEEEEECTTSCEEEEEECS
T ss_pred             EEEEEEecHHHHHHHHHHHHhCcceeeeeccCCcEEEEEECCCCCEEEEEEeC
Confidence            89999999  999999999999998764 345688999999999999999854

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8

Probab=99.72  E-value=3.3e-17  Score=122.79  Aligned_cols=116  Identities=12%  Similarity=0.135  Sum_probs=83.1

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECC--eEEEEEecCCCCCCCCCCCCCCcceEEEEE
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHTCIA  169 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~--~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~  169 (214)
                      ....||.|.|.|++++++||+++|||++...... ......+|+..++  ..+++........    ...+.+.+|++|.
T Consensus        10 ~~~~~i~l~v~Dl~~s~~FY~~~LG~~~~~~~~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~----~~~~~~~~hi~~~   84 (139)
T 1twu_A           10 AAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQ-HNGYDGVMFGLPHADYHLEFTQYEGGST----APVPHPDSLLVFY   84 (139)
T ss_dssp             CSCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEE-ETTEEEEEEESSSSSEEEEEEEETTCCC----CCCCCTTCEEEEE
T ss_pred             cceeEEeeEeCCHHHHHHHHHhcCCcEEEEeccC-CCCeeEEEEecCCCceEEEEeecCCCCC----CCCCCCccEEEEE
Confidence            4567889999999999999999999998854321 1233456677654  3456655433211    1234567899999


Q ss_pred             ECCH---HHHHHHHHhCCCeEEe--ec-CCceEEEEEcCCCCeEEEEee
Q 028083          170 IRDV---SKLKMILDKAGISYTL--SK-SGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       170 V~dv---~~~~~~l~~~G~~~~~--~~-~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      |+|+   ++++++|+++|+++..  .+ .+....||+|||||+|||++.
T Consensus        85 v~d~~~l~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~DPdG~~iel~~~  133 (139)
T 1twu_A           85 VPNAVELAAITSKLKHMGYQEVESENPYWSNGGVTIEDPDGWRIVFMNS  133 (139)
T ss_dssp             CCCHHHHHHHHHHHHHTTCCEECCSSHHHHSSEEEEECTTCCEEEEESS
T ss_pred             eCCcchHHHHHHHHHHcCCcCcCCCCcccCCCCeEEECCCCCEEEEEEc
Confidence            9999   9999999999999873  21 111113799999999999975

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}

Probab=99.71  E-value=1.5e-16  Score=120.08  Aligned_cols=114  Identities=18%  Similarity=0.235  Sum_probs=82.7

Q ss_pred             eEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCC-C---CCCCCCCCcceEEEEEE
Q 028083           95 HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP-L---SGRPEHGGRDRHTCIAI  170 (214)
Q Consensus        95 ~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~-~---~~~~~~g~g~~hiaf~V  170 (214)
                      -.+.|.|.|++++++||+++|||++....+..    ..+++..|+..+.+........ .   ......+.++. ++|.|
T Consensus         7 ~~~~l~v~Dl~~s~~FY~~~LG~~~~~~~~~~----~~~~l~~g~~~l~l~~~~~~~~~~~~~~~~~~~~~g~~-~~~~v   81 (145)
T 2rk9_A            7 VVPELYCFDINVSQSFFVDVLGFEVKYERPDE----EFVYLTLDGVDVMLEGIAGKSRKWLSGDLEFPLGSGVN-FQWDV   81 (145)
T ss_dssp             EEEEEEESSHHHHHHHHHHTTCCEEEEEEGGG----TEEEEEETTEEEEEEEC-----------CCSSTTTTEE-EEEEC
T ss_pred             ceEEEEECCHHHHHHHHHhccCCEEEeecCCC----CEEEEEcCCeEEEEEeccCCCcccccCccccCCCCceE-EEEEE
Confidence            35889999999999999999999998532211    2467888888888876522111 0   00112344554 99999


Q ss_pred             CCHHHHHHHHHh-CCCeEEeec-----------CCceEEEEEcCCCCeEEEEeec
Q 028083          171 RDVSKLKMILDK-AGISYTLSK-----------SGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       171 ~dv~~~~~~l~~-~G~~~~~~~-----------~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      +|+++++++|++ +|+++..++           .+++.++|+|||||.|||++..
T Consensus        82 ~dvd~~~~~l~~~~G~~~~~~~~~~~~g~~~~~~~~~~~~~~DPdG~~iel~~~~  136 (145)
T 2rk9_A           82 IDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTPDGYLFRFCQDI  136 (145)
T ss_dssp             SCHHHHHHHHHHHHGGGEEEEEEEEEC-----CCEEEEEEEECTTCCEEEEEEC-
T ss_pred             CCHHHHHHHHHhhCCCeEecCccccccccCCCCCcceEEEEECCCCCEEEEEEcC
Confidence            999999999999 999875321           2358899999999999999864

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.71  E-value=2.4e-16  Score=135.95  Aligned_cols=116  Identities=16%  Similarity=0.163  Sum_probs=87.4

Q ss_pred             cceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECC--eEEEEEecCCCCCCCCCCCCCCcceE
Q 028083           88 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRH  165 (214)
Q Consensus        88 ~~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~--~~l~l~~~~~~~~~~~~~~~g~g~~h  165 (214)
                      .+.+++++||+|.|.|++++.+||+++|||++.....      ..+++..|+  ..+++......  +...+ ..++++|
T Consensus       148 ~~~i~gl~Hv~L~v~Dle~t~~FY~~vLG~~~~~~~~------~~~~~~~g~~~~~l~l~~~~~~--~~~~~-g~g~~~H  218 (335)
T 3oaj_A          148 DVAIKGFGGATLLSEQPDKTADLLENIMGLERVGKEG------DFVRYRSAGDIGNVIDLKLTPI--GRGQM-GAGTVHH  218 (335)
T ss_dssp             TTSCCEEEEEEEECSSHHHHHHHHHHTSCCEEEEEET------TEEEEECSSSSSCEEEEESSCC--CBCBC-SBTEEEE
T ss_pred             hhhhccccceEEEECCHHHHHHHHHHHhCCEEeeccC------CEEEEEeCCCCcEEEEEeCCCC--CcCCC-CCcceEE
Confidence            4567999999999999999999999999999986532      123344443  46777654322  11111 2346899


Q ss_pred             EEEEECC---HHHHHHHHHhCCCeEEee--cCCceEEEEEcCCCCeEEEEee
Q 028083          166 TCIAIRD---VSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       166 iaf~V~d---v~~~~~~l~~~G~~~~~~--~~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      +||.|+|   +++++++|+++|+++...  +....++||+|||||+|||+..
T Consensus       219 iAf~v~d~~~l~~~~~~L~~~G~~~~~~~~r~~~~siYfrDP~G~~iEl~td  270 (335)
T 3oaj_A          219 IAWRANDDEDQLDWQRYIASHGYGVTPVRDRNYFNAIYFREHGEILFEIATD  270 (335)
T ss_dssp             EEEEESSHHHHHHHHHHHHHTTCCCCCCEECSSSEEEEEECTTSCEEEEEES
T ss_pred             EEEEcCCHHHHHHHHHHHHHCCCCccccccCCcEEEEEEECCCCcEEEEEeC
Confidence            9999997   667999999999987533  3457889999999999999975

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=99.70  E-value=2.9e-17  Score=122.96  Aligned_cols=115  Identities=18%  Similarity=0.169  Sum_probs=80.4

Q ss_pred             ceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEE-----Eec-CCCCCCCCCCCCCCc
Q 028083           89 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHL-----MEL-PNPDPLSGRPEHGGR  162 (214)
Q Consensus        89 ~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l-----~~~-~~~~~~~~~~~~g~g  162 (214)
                      +.+++++|+.|.|.|++++++||+++|||++....+  .    ..++. ++..+..     ... .....  .....+.+
T Consensus         4 ~~~~~l~~v~l~v~D~~~a~~FY~~~LG~~~~~~~~--~----~~~~~-~g~~l~~~~~~~~~~~~~~~~--~~~~~~~~   74 (141)
T 2qnt_A            4 FQGMRFVNPIPFVRDINRSKSFYRDRLGLKILEDFG--S----FVLFE-TGFAIHEGRSLEETIWRTSSD--AQEAYGRR   74 (141)
T ss_dssp             CCSCCCCCCCCEESCHHHHHHHHHHTTCCCEEEECS--S----EEEET-TSCEEEEHHHHHHHHHSCCC----CCCSCCS
T ss_pred             ccccccceEEEEECCHHHHHHHHHHhcCCEEEEEcC--C----cEEEe-ccceeccCchhhhhccccCCc--cccccCCC
Confidence            345789999999999999999999999999986432  1    12232 3333321     010 00000  01123456


Q ss_pred             ceEEEEEECCHHHHHHHHHhCCCeEEee----cCCceEEEEEcCCCCeEEEEeec
Q 028083          163 DRHTCIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       163 ~~hiaf~V~dv~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      ..|++|.|+|+++++++|++ |+++..+    ..|.+.++++|||||.|||++..
T Consensus        75 ~~~~~~~v~dv~~~~~~l~~-G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  128 (141)
T 2qnt_A           75 NMLLYFEHADVDAAFQDIAP-HVELIHPLERQAWGQRVFRFYDPDGHAIEVGESL  128 (141)
T ss_dssp             SCEEEEEESCHHHHHC-CGG-GSCEEEEEEECTTSCEEEEEECTTCCEEEEEECC
T ss_pred             ceEEEEEeCcHHHHHHHHHc-CCccccCCccCCCCCEEEEEECCCCCEEEEEecc
Confidence            78999999999999999999 9987533    23568999999999999999853

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.70  E-value=6.4e-16  Score=131.97  Aligned_cols=112  Identities=17%  Similarity=0.228  Sum_probs=85.8

Q ss_pred             cceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCe--EEEEEecCCCCCCCCCCCCCCcceE
Q 028083           88 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRH  165 (214)
Q Consensus        88 ~~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~--~l~l~~~~~~~~~~~~~~~g~g~~h  165 (214)
                      ...+.+++||+|.|+|++++.+|| ++|||++..............|+..++.  .+.+....           +.+++|
T Consensus       147 ~~~~~~l~Hv~l~v~D~~~a~~FY-~~LGf~~~~~~~~~~g~~~~~f~~~~~~~~~~~~~~~~-----------~~~~~H  214 (323)
T 1f1u_A          147 AGELVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGGN-----------GPRMHH  214 (323)
T ss_dssp             TTCCCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSSSCSEEEEESS-----------BSEEEE
T ss_pred             CCCCceeeeEEEecCCHHHHHHHH-HhCCCeEEEEEEcCCCcEEEEEEEcCCCcccEEEeCCC-----------CCCceE
Confidence            355689999999999999999999 9999999865433233345667776432  23333211           237899


Q ss_pred             EEEEECCHHH---HHHHHHhCCC--eEEee--c---CCceEEEEEcCCCCeEEEEe
Q 028083          166 TCIAIRDVSK---LKMILDKAGI--SYTLS--K---SGRPAIFTRDPDANALEFTQ  211 (214)
Q Consensus       166 iaf~V~dv~~---~~~~l~~~G~--~~~~~--~---~g~~~~~~~DPdG~~iEl~~  211 (214)
                      ++|+|+|+++   ++++|+++|+  ++..+  +   .+..++||+|||||+||+++
T Consensus       215 iaf~v~d~d~v~~~~~~l~~~G~~~~i~~~p~~~~~~~~~~~y~~DPdG~~iE~~~  270 (323)
T 1f1u_A          215 VAFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYT  270 (323)
T ss_dssp             EEEECSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEE
T ss_pred             EEEECCCHHHHHHHHHHHHHCCCccccccCCCccCCCCcEEEEEECCCCCEEEEEe
Confidence            9999999888   9999999999  87642  2   34678999999999999986

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.69  E-value=2.3e-16  Score=133.55  Aligned_cols=114  Identities=17%  Similarity=0.279  Sum_probs=85.6

Q ss_pred             ceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCC-CCCceEEEEEECCe--EEEEEecCCCCCCCCCCCCCCcceE
Q 028083           89 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD-KLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRH  165 (214)
Q Consensus        89 ~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~-~~~~~~~~l~~g~~--~l~l~~~~~~~~~~~~~~~g~g~~h  165 (214)
                      +.+.+++||+|.|+|++++.+||+++|||++....... .......|+..++.  .+.+...  +        ..++++|
T Consensus       147 ~~~~~i~Hv~l~v~D~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--------~~~~~~H  216 (309)
T 3hpy_A          147 IAPIQLDHCLLYGPNIAEVQKIFTEVLGFYLVERVLSPDGDSDMGIWLSCSHKVHDIAFVEY--P--------EKGKLHH  216 (309)
T ss_dssp             SCCSEEEEEEEEESCHHHHHHHHHHTSCCEEEEEEECSSSCSEEEEEEESSSSSCSEEEEEC--S--------STTEEEE
T ss_pred             cccceeeeEEEEeCCHHHHHHHHHHhcCCEEEEEEecCCCCceEEEEEecCCCceeEEEecC--C--------CCCceeE
Confidence            45789999999999999999999999999997543222 23345677877543  2333332  1        1246899


Q ss_pred             EEEEECCHH---HHHHHHHhCCCeEEeec-----CCceEEEEEcCCCCeEEEEee
Q 028083          166 TCIAIRDVS---KLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       166 iaf~V~dv~---~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      +||.|+|++   +++++|+++|+++..++     .+.+++||+|||||+|||+..
T Consensus       217 iaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~  271 (309)
T 3hpy_A          217 CSFLLESWEQVLRAGDIMSMNEVNVDIGPTRHGVTRGCTIYAWDPSGNRFETFMG  271 (309)
T ss_dssp             EEEECSSHHHHHHHHHHHHHTTCCBSSCSEECSSSSEEEEEEECTTSCEEEEEEE
T ss_pred             EEEECCCHHHHHHHHHHHHHCCCEEEeCCccCCCCccEEEEEECCCCCEEEEEeC
Confidence            999999765   57899999999875322     346889999999999999864

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=99.68  E-value=3.4e-16  Score=130.04  Aligned_cols=109  Identities=18%  Similarity=0.229  Sum_probs=87.6

Q ss_pred             ceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEE
Q 028083           89 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  168 (214)
Q Consensus        89 ~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf  168 (214)
                      .++++++||.|.|+|++++.+||+++|||++....+      ..+++..|+..+.+......         +.+..|++|
T Consensus        22 ~~~~~l~hV~L~V~Dle~s~~FY~~vLGl~~~~~~~------~~~~L~~g~~~l~l~~~~~~---------~~~~~hiaf   86 (252)
T 3pkv_A           22 GHMTSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQA------DAFTIQLGVSQIQFRAAADG---------TKPFYHIAI   86 (252)
T ss_dssp             ---CCEEEEEEEESCHHHHHHHHHHHHCGGGEEECS------SEEEEEETTEEEEEEECCTT---------CCCCCEEEE
T ss_pred             CcCceEEEEEEEeCCHHHHHHHHHHhcCCEEEEccC------CEEEEEeCCEEEEEEECCCC---------CCCeeEEEE
Confidence            345899999999999999999999999999886543      23678888887877764322         235789999


Q ss_pred             EEC--CHHHHHHHHHhCCCeEEe--e-------cCCceEEEEEcCCCCeEEEEeec
Q 028083          169 AIR--DVSKLKMILDKAGISYTL--S-------KSGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       169 ~V~--dv~~~~~~l~~~G~~~~~--~-------~~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      .|+  ++++++++|+++ +++..  +       ..+.+.+||+|||||.|||++.+
T Consensus        87 ~V~~~dld~~~~rL~~~-v~~~~~~~~~~~~~~~~g~~~~~f~DPdGn~iEl~~~~  141 (252)
T 3pkv_A           87 NIAANHFQEGKAWLSGF-GELLTENDEDQAYFPFFNAYSCYVEDPSGNIIELISRQ  141 (252)
T ss_dssp             EECTTCHHHHHHHHTTS-SCCCCBTTBSCEEETTTTEEEEEEECTTCCEEEEEEES
T ss_pred             EecHHHHHHHHHHHHhc-ceEeccCCccccccccCCeEEEEEECCCCCEEEEEEeC
Confidence            997  799999999999 98754  1       34588999999999999999854

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.67  E-value=1.1e-15  Score=128.93  Aligned_cols=115  Identities=16%  Similarity=0.282  Sum_probs=84.2

Q ss_pred             cceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECC--eEEEEEecCCCCCCCCCCCCCCcceE
Q 028083           88 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRH  165 (214)
Q Consensus        88 ~~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~--~~l~l~~~~~~~~~~~~~~~g~g~~h  165 (214)
                      .+++.+++||.|.|.|++++++||+++|||++..............|+..++  ..+.+....          ..++.+|
T Consensus       145 ~~~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~----------~~g~~~h  214 (307)
T 1mpy_A          145 GMAAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAFIHHP----------EKGRLHH  214 (307)
T ss_dssp             TTCCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSBSCSEEEEECS----------SSSEEEE
T ss_pred             CCCcCceeeEEEEcCCHHHHHHHHHHHcCCeeEeeeecCCCcEEEEEEEcCCCceeEEEecCC----------CCCcceE
Confidence            3567899999999999999999999999999986432222112234666543  234443321          1123789


Q ss_pred             EEEEEC---CHHHHHHHHHhCCCeEEee--c---CCceEEEEEcCCCCeEEEEee
Q 028083          166 TCIAIR---DVSKLKMILDKAGISYTLS--K---SGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       166 iaf~V~---dv~~~~~~l~~~G~~~~~~--~---~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      ++|.|+   |+++++++|+++|+++..+  .   ..++.+||+|||||+|||++.
T Consensus       215 i~f~v~d~~dv~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  269 (307)
T 1mpy_A          215 VSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCG  269 (307)
T ss_dssp             EEEECSCHHHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEEC
T ss_pred             EEEEcCCHHHHHHHHHHHHHCCCceeeCCccCCCCCceEEEEECCCCcEEEEEec
Confidence            999999   6778889999999997532  2   226789999999999999985

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.66  E-value=1.2e-15  Score=129.01  Aligned_cols=109  Identities=19%  Similarity=0.224  Sum_probs=84.6

Q ss_pred             ceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEE-CC---eEEEEEecCCCCCCCCCCCCCCcce
Q 028083           89 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GA---EMIHLMELPNPDPLSGRPEHGGRDR  164 (214)
Q Consensus        89 ~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~-g~---~~l~l~~~~~~~~~~~~~~~g~g~~  164 (214)
                      +.+++++||.|.|+|++++.+||+++|||++......     ...|+.. ++   ..+.+....           .++..
T Consensus         4 ~~i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~-----~~~~l~~~~~~~~~~l~l~~~~-----------~~~~~   67 (309)
T 3hpy_A            4 TGVLRPGHAQVRVLNLEEGIHFYRNVLGLVETGRDDQ-----GRVYFKCWDERDHSCYIIREAD-----------TAGID   67 (309)
T ss_dssp             CSEEEEEEEEEEESSHHHHHHHHHHTSCCEEEEECTT-----SCEEEECTTCCBSCSEEEEECS-----------SCEEE
T ss_pred             cccceeeEEEEEcCCHHHHHHHHHhccCCEEEEEcCC-----CeEEEEeccCCCceEEEEEeCC-----------CCcee
Confidence            3478999999999999999999999999999865321     1356664 43   234443321           23679


Q ss_pred             EEEEEECC---HHHHHHHHHhCCCeEEeec-----CCceEEEEEcCCCCeEEEEeec
Q 028083          165 HTCIAIRD---VSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       165 hiaf~V~d---v~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      |++|.|+|   +++++++|+++|+++...+     .+++.+||+|||||.|||++..
T Consensus        68 h~a~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~f~DPdG~~iel~~~~  124 (309)
T 3hpy_A           68 FFGFKVLDKATLEKLDADLQAYGLTTTRIPAGEMLETGERVRFELPSGHLIELYAEK  124 (309)
T ss_dssp             EEEEEESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCB
T ss_pred             EEEEEECCHHHHHHHHHHHHhCCCceeeccCCccCCCeeEEEEECCCCCEEEEEEcc
Confidence            99999996   9999999999999986542     3478999999999999999743

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.66  E-value=8.5e-16  Score=132.03  Aligned_cols=117  Identities=12%  Similarity=0.066  Sum_probs=86.8

Q ss_pred             cceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCC-----------CCCceEEEEEEC----CeEEEEEecCCCCC
Q 028083           88 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD-----------KLPYRGAWLWVG----AEMIHLMELPNPDP  152 (214)
Q Consensus        88 ~~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~-----------~~~~~~~~l~~g----~~~l~l~~~~~~~~  152 (214)
                      .|++++++||+|.|.|++++++||+++|||++.......           ..+...+|+..+    ...+++....... 
T Consensus        22 ~M~~~~i~Hv~l~V~Dle~s~~FY~~vLGl~~~~~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~~~~~~leL~~~~~~~-  100 (330)
T 3zi1_A           22 SMAARRALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDHFVAELTYNYGVG-  100 (330)
T ss_dssp             GCSCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEC---------CCCSCEEEEEEESSCTTTCCEEEEEEETTCC-
T ss_pred             ecccceeeEEEEEeCCHHHHHHHHHHhcCCeEEEEeecchhhhhhccCCcCCceEEEEEecCCCCCccEEEEeccCCCC-
Confidence            566789999999999999999999999999997543322           223345566554    2356666543321 


Q ss_pred             CCCCCCCCCcceEEEEEECCHHHHHHHHHhCCCeEEeecCCceEEEEEcCCCCeEEEEeec
Q 028083          153 LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       153 ~~~~~~~g~g~~hiaf~V~dv~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                         ....+.++.|++|.|+|+   +++++++|+++...+.  ..+||+|||||.|||++..
T Consensus       101 ---~~~~~~g~~hiaf~V~d~---~~~l~~~G~~~~~~~~--~~~~~~DPdG~~iel~~~~  153 (330)
T 3zi1_A          101 ---DYKLGNDFMGITLASSQA---VSNARKLEWPLTEVAE--GVFETEAPGGYKFYLQNRS  153 (330)
T ss_dssp             ---CCCBCSSEEEEEEECHHH---HHHHHHHTCCCEEEET--TEEEEECTTSCEEEEESSC
T ss_pred             ---ccccCCCeeEEEEECchH---HHHHHHcCCceeccCC--ceEEEECCCCCEEEEEecC
Confidence               123456889999999988   6778889999875543  3789999999999999853

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.66  E-value=1.4e-15  Score=129.17  Aligned_cols=107  Identities=16%  Similarity=0.234  Sum_probs=84.0

Q ss_pred             ceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCe--EEEEEecCCCCCCCCCCCCCCcceEE
Q 028083           89 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHT  166 (214)
Q Consensus        89 ~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~--~l~l~~~~~~~~~~~~~~~g~g~~hi  166 (214)
                      .++.+++||+|.|+|++++.+||+++|||++.....     ....|+..++.  .+.+...+            .|++|+
T Consensus       137 ~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~-----~~~~fl~~~~~~~~l~l~~~~------------~g~~hi  199 (310)
T 3b59_A          137 GVPVKISHIVLHSPNHQDMVKFFTDVLGFKVSDWLG-----DFMCFLRCNSAHHRIAILPGP------------PCLNHV  199 (310)
T ss_dssp             CCCCEEEEEEEEETTHHHHHHHHHHTSCCEEEEEET-----TTEEEEESSSBSCSEEEEESS------------SEEEEE
T ss_pred             CcCcEeceEEEecCCHHHHHHHHHhCCCCEEEEeeC-----CeEEEEecCCCcceEEEECCC------------CceEEE
Confidence            456899999999999999999999999999986532     13567776543  34443311            368999


Q ss_pred             EEEECCHHHH---HHHHHhCCCeEEee--c---CCceEEEEEcCCCCeEEEEee
Q 028083          167 CIAIRDVSKL---KMILDKAGISYTLS--K---SGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       167 af~V~dv~~~---~~~l~~~G~~~~~~--~---~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      +|.|+|++++   +++|+++|+++..+  +   .+.+++||+|||||.|||++.
T Consensus       200 ~f~v~d~d~~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~  253 (310)
T 3b59_A          200 AYDMLSVDDMMRGAHRLKVKGIDIGWGPGRHTAGNNTFSYFVTPGGFVTEYTSE  253 (310)
T ss_dssp             EEECSSHHHHHHHHHHHHHTTCCCSEEEEECSTTCCEEEEEECTTSCEEEEEEC
T ss_pred             EEEcCCHHHHHHHHHHHHHcCCceeecCccccCCCcEEEEEECCCCCEEEEEeC
Confidence            9999997766   99999999987543  2   236789999999999999874

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.65  E-value=1.2e-15  Score=128.24  Aligned_cols=108  Identities=16%  Similarity=0.139  Sum_probs=84.5

Q ss_pred             eeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEEEE
Q 028083           91 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  170 (214)
Q Consensus        91 i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V  170 (214)
                      +++++||.|.|.|++++++||+++|||++....+      ..+|+..++..+.+.....+         .++..|++|.|
T Consensus         2 i~~i~hv~l~v~Dl~~s~~FY~~~LG~~~~~~~~------~~~~~~~~~~~~~l~~~~~~---------~~~~~~~~f~v   66 (297)
T 1lgt_A            2 IRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD------NGDLFRIDSRAWRIAVQQGE---------VDDLAFAGYEV   66 (297)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSBSCSEEEEECT---------TCEEEEEEEEE
T ss_pred             ceEEEEEEEEcCCHHHHHHHHHHccCCEEeecCC------CeEEEEeCCCcEEEEEecCC---------CCCccEEEEEe
Confidence            5799999999999999999999999999986532      13566666542222221111         24678999999


Q ss_pred             C---CHHHHHHHHHhCCCeEEeec-------CCceEEEEEcCCCCeEEEEeec
Q 028083          171 R---DVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       171 ~---dv~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      +   |+++++++|+++|+++...+       .+.+.+||+|||||.|||++..
T Consensus        67 ~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  119 (297)
T 1lgt_A           67 ADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYGA  119 (297)
T ss_dssp             SSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHCCCeEEeCCccccccCCceeEEEEECCCCCEEEEEECc
Confidence            9   99999999999999976432       4578999999999999999854

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.65  E-value=1.9e-15  Score=129.75  Aligned_cols=125  Identities=14%  Similarity=0.187  Sum_probs=88.9

Q ss_pred             CCcc-eeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCC-CCceEEEEEEC----CeEEEEEecCCCCCCCCCCCC
Q 028083           86 IRDY-GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK-LPYRGAWLWVG----AEMIHLMELPNPDPLSGRPEH  159 (214)
Q Consensus        86 ~~~~-~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~-~~~~~~~l~~g----~~~l~l~~~~~~~~~~~~~~~  159 (214)
                      ..+| ++.+++||.|.|+|++++++||+++|||++.......+ ......++..+    +..+.++.......  . ...
T Consensus        22 ~~~m~~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~l~~~~~~~~--~-~~~   98 (338)
T 1zsw_A           22 SNAMYEIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGR--T-YRG   98 (338)
T ss_dssp             SCCSSCCCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCB--C-BCC
T ss_pred             cCccCcCccccEEEEEcCCHHHHHHHHHHhcCCEEEEeecccCCCceEEEEEcCCCCCCCCEEEEEECCCCcc--C-cCC
Confidence            3444 47899999999999999999999999999986432111 11112223332    35666665432211  1 112


Q ss_pred             CCcceEEEEEEC---CHHHHHHHHHhCCCeEEee--cCCceEEEEEcCCCCeEEEEeec
Q 028083          160 GGRDRHTCIAIR---DVSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       160 g~g~~hiaf~V~---dv~~~~~~l~~~G~~~~~~--~~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      ..+..|++|.|+   |+++++++|+++|+++..+  ..|.+.+||+|||||.|||++..
T Consensus        99 ~~~~~hiaf~v~~~~dld~~~~~l~~~G~~~~~~~~~~G~~~~~f~DPdG~~iel~~~~  157 (338)
T 1zsw_A           99 TNAITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANRPALQFEDAEGLRLVLLVSN  157 (338)
T ss_dssp             BSEEEEEEEEESCHHHHHHHHHHHHHTTCEECCSEEETTEEEEEEECTTCCEEEEEECT
T ss_pred             CCCeeeEEEEcCCHHHHHHHHHHHHHCCCccccccccCCcEEEEEECCCCCEEEEEEcC
Confidence            346789999998   7999999999999998643  24668999999999999999854

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.64  E-value=1.6e-15  Score=127.53  Aligned_cols=113  Identities=12%  Similarity=0.221  Sum_probs=83.7

Q ss_pred             eeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCC---------CCCceEEEEEECC--eEEEEEecCCCCCCCCCCC
Q 028083           90 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD---------KLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPE  158 (214)
Q Consensus        90 ~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~---------~~~~~~~~l~~g~--~~l~l~~~~~~~~~~~~~~  158 (214)
                      .+.+++||.|.|.|++++++||+++|||++.......         +......|+..++  ..+.+...  +        
T Consensus       139 ~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~--~--------  208 (300)
T 2zyq_A          139 GEQGMGHVVLSTRDDAEALHFYRDVLGFRLRDSMRLPPQMVGRPADGPPAWLRFFGCNPRHHSLAFLPM--P--------  208 (300)
T ss_dssp             GGGCSCEEEEECSCHHHHHHHHHTTTCCEEEEEEEECGGGGTCCTTSCCEEEEEEESSSBSCSEEEESS--C--------
T ss_pred             CCCccCeEEEEeCCHHHHHHHHHHhcCCEEeeeecccccccccCCCCCceEEEEEEECCCccEEEEecC--C--------
Confidence            3578999999999999999999999999987432111         1123456777654  23445432  1        


Q ss_pred             CCCcceEEEEEECCHHH---HHHHHHhCCCeEEeec-----CCceEEEEEcCCCCeEEEEee
Q 028083          159 HGGRDRHTCIAIRDVSK---LKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       159 ~g~g~~hiaf~V~dv~~---~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      ...+.+|++|.|+|+++   ++++|+++|+++..++     .+.+++||+|||||+|||++.
T Consensus       209 ~~~g~~h~af~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~  270 (300)
T 2zyq_A          209 TSSGIVHLMVEVEQADDVGLCLDRALRRKVPMSATLGRHVNDLMLSFYMKTPGGFDIEFGCE  270 (300)
T ss_dssp             CSSSEEEEEEEBSSHHHHHHHHHHHHHTTCCEEEEEEEESSSCCEEEEEECTTSSEEEEEEC
T ss_pred             CCCCceEEEEEeCCHHHHHHHHHHHHHCCCceeecccccCCCCeEEEEEECCCCCEEEEEeC
Confidence            12467999999998655   6999999999986432     237889999999999999874

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.64  E-value=1.2e-15  Score=127.83  Aligned_cols=108  Identities=13%  Similarity=0.135  Sum_probs=83.6

Q ss_pred             eeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEEEE
Q 028083           91 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  170 (214)
Q Consensus        91 i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V  170 (214)
                      +++++||.|.|.|++++++||+++|||++....+      ..+|+..++..+.+......         .++..|++|.|
T Consensus         2 i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~------~~~~l~~~~~~~~l~~~~~~---------~~~~~~~~f~v   66 (292)
T 1kw3_B            2 IERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG------DAALYRADQRAWRIAVQPGE---------LDDLAYAGLEV   66 (292)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSBSCSEEEEECT---------TCEEEEEEEEC
T ss_pred             ceeEEEEEEEeCCHHHHHHHHHhcCCCEEeecCC------CeEEEEcCCceEEEEEccCC---------CCCccEEEEEE
Confidence            5789999999999999999999999999986532      13566665532222221111         24678999999


Q ss_pred             C---CHHHHHHHHHhCCCeEEeec-------CCceEEEEEcCCCCeEEEEeec
Q 028083          171 R---DVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       171 ~---dv~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      +   |+++++++|+++|+++...+       .+.+.++|+|||||.|||++..
T Consensus        67 ~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  119 (292)
T 1kw3_B           67 DDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYGP  119 (292)
T ss_dssp             SSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHcCCeEeecCcccccccCceEEEEEECCCCCEEEEEECc
Confidence            8   99999999999999976432       4578899999999999999753

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans}

Probab=99.64  E-value=3e-15  Score=113.38  Aligned_cols=115  Identities=14%  Similarity=0.129  Sum_probs=76.2

Q ss_pred             eeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeee-cCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCc------
Q 028083           90 GVVSVHHVGILCENLERSLEFYQNILGLEINEA-RPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGR------  162 (214)
Q Consensus        90 ~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~-~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g------  162 (214)
                      ++.+++|+.|.|.|++++++||+++|||++... ...++    ..++  | ..+.+. ...+..... ...+..      
T Consensus        18 ~~~~~~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~----~~~~--g-~~l~l~-~~~~~~~~~-~~~~~~~~~g~~   88 (148)
T 3bt3_A           18 YVVRENGPVYFTKDMDKTVKWFEEILGWSGDIVARDDEG----FGDY--G-CVFDYP-SEVAVAHLT-PFRGFHLFKGEP   88 (148)
T ss_dssp             CEEEECCCEEEESCHHHHHHHHHHTTCCEEEEEEECTTS----CEEE--E-EEESSC-TTTTSCC---CCCSEEEEESCC
T ss_pred             ceEEeeeEEEEECCHHHHHHHHHhccCCEEEeeeecCCC----ccEE--c-cEEEEe-ccCCCcccc-cccccceeeccC
Confidence            467999999999999999999999999999632 22112    1233  2 223331 111111100 000111      


Q ss_pred             -ceEEEE-EECCHHHHHHHHHhCCCeEEee----cCCceEEEEEcCCCCeEEEEeec
Q 028083          163 -DRHTCI-AIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       163 -~~hiaf-~V~dv~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                       ..+.+| .|+|+++++++|+++|+++..+    ..|.+.+||+|||||.|||++..
T Consensus        89 ~~~~~~~~~v~dvd~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  145 (148)
T 3bt3_A           89 IKGVAGFMMIEGIDALHKYVKENGWDQISDIYTQPWGARECSITTTDGCILRFFESI  145 (148)
T ss_dssp             CSSEEEEEEEECHHHHHHHHHHTTCCCBCCCEEETTTEEEEEEECTTSCEEEEEEEC
T ss_pred             CCccEEEEEcCCHHHHHHHHHHcCCccccCcccCCCccEEEEEECCCCCEEEEeeec
Confidence             112255 9999999999999999987532    24568899999999999999864

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.64  E-value=3.5e-15  Score=130.07  Aligned_cols=149  Identities=13%  Similarity=0.159  Sum_probs=100.3

Q ss_pred             cceeeccccccceeeeceeeeeeceeeecCccCccchhhhccCCCCccccCCcceeeeEeEEEEEcCCHHHHHHHHHHhc
Q 028083           36 TTTVRKCRCNGQFLTTKAKMSVEGGILKKEPIRDSDKIETATNGKHNIKEIRDYGVVSVHHVGILCENLERSLEFYQNIL  115 (214)
Q Consensus        36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~HV~l~V~D~~~a~~FY~~~L  115 (214)
                      ++.+...++.|..++++..+........+                  ........+.+++||+|.|.|++++..||++ |
T Consensus       113 g~~~~f~DPdG~~iEl~~~~~~~~~~~~~------------------~~~~~~~~~~rlgHV~L~v~D~~~t~~Fy~~-L  173 (365)
T 4ghg_A          113 GDALRVEDPLGFPYEFFFETTHVERLHMR------------------YDLYSAGELVRLDHFNQVTPDVPRGRKYLED-L  173 (365)
T ss_dssp             CSEEEEECTTSCEEEEECCBCCCCCCTTC------------------TTTCCTTCCCEEEEEEEEESCHHHHHHHHHH-T
T ss_pred             ceEEEEECCCCCEEEEEEEeecccccccc------------------ccccccccCcceeEEEEeecCHHHHHHHHHh-c
Confidence            45677777777777776543222110000                  0111234468999999999999999999987 9


Q ss_pred             CCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEEEECCHH---HHHHHHHhCCCe--EEee
Q 028083          116 GLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVS---KLKMILDKAGIS--YTLS  190 (214)
Q Consensus       116 Gf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V~dv~---~~~~~l~~~G~~--~~~~  190 (214)
                      ||++.............+|+..++....+.....         .+++++|++|+|+|++   +++++|+++|+.  +.++
T Consensus       174 Gf~~sd~~~~~~g~~~~~f~~~~~~hH~la~~~~---------~~~~lhHvaf~v~d~d~v~~~~d~l~~~g~~~~i~~G  244 (365)
T 4ghg_A          174 GFRVTEDIQDDEGTTYAAWMHRKGTVHDTALTGG---------NGPRLHHVAFSTHEKHNIIQICDKMGALRISDRIERG  244 (365)
T ss_dssp             TCEEEEEEECTTSCEEEEEEESSSSSCSEEEEES---------SBSEEEEEEEECSSHHHHHHHHHHHHHTTCGGGEEEE
T ss_pred             CCEEEEEEecCCCceeEEeeecCCcccceeeecC---------CCCceeEEEEecCCHHHHHHHHHHHHhCCCCceeEeC
Confidence            9999866544444556778887654322221111         1357999999999765   567899999985  4433


Q ss_pred             --cC---CceEEEEEcCCCCeEEEEee
Q 028083          191 --KS---GRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       191 --~~---g~~~~~~~DPdG~~iEl~~~  212 (214)
                        ++   ...++||+||+||+||++.-
T Consensus       245 pgRH~~~~~~f~Y~~dP~G~~iE~~t~  271 (365)
T 4ghg_A          245 PGRHGVSNAFYLYILDPDNHRIEIYTQ  271 (365)
T ss_dssp             EEECSTTCCEEEEEECTTCCEEEEEEC
T ss_pred             CCccCCCCcEEEEEECCCCceEEEEcC
Confidence              33   37889999999999999863

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.63  E-value=1.5e-15  Score=127.71  Aligned_cols=107  Identities=17%  Similarity=0.167  Sum_probs=83.3

Q ss_pred             ceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEee-ecCCCCCCceEEEEEECCe--EEEEEecCCCCCCCCCCCCCCcceE
Q 028083           89 YGVVSVHHVGILCENLERSLEFYQNILGLEINE-ARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRH  165 (214)
Q Consensus        89 ~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~-~~~~~~~~~~~~~l~~g~~--~l~l~~~~~~~~~~~~~~~g~g~~h  165 (214)
                      |++++++||.|.|.|++++++||+++|||++.. ..+      ..+|+..++.  .+.+...  .         .++..|
T Consensus         1 M~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~------~~~~~~~~~~~~~l~l~~~--~---------~~~~~~   63 (300)
T 2zyq_A            1 MSIRSLGYLRIEATDMAAWREYGLKVLGMVEGKGAPE------GALYLRMDDFPARLVVVPG--E---------HDRLLE   63 (300)
T ss_dssp             -CCCEEEEEEEEESCHHHHHHHHHHTSCCEECSSCCS------SCEEEESSSSSCSEEEEEC--S---------SCEEEE
T ss_pred             CCcceEEEEEEEeCCHHHHHHHHHHccCCEEeccCCC------CeEEEEeCCCcEEEEEecC--C---------CCCcce
Confidence            457899999999999999999999999999976 321      1256666543  3444331  1         246789


Q ss_pred             EEEEECC---HHHHHHHHHhCCCeEEeec-------CCceEEEEEcCCCCeEEEEee
Q 028083          166 TCIAIRD---VSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       166 iaf~V~d---v~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      ++|.|++   +++++++|+++|+++...+       .+.+.+||+|||||.|||++.
T Consensus        64 ~~~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  120 (300)
T 2zyq_A           64 AGWECANAEGLQEIRNRLDLEGTPYKEATAAELADRRVDEMIRFADPSGNCLEVFHG  120 (300)
T ss_dssp             EEEECSSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTCCEEEEEEC
T ss_pred             EEEEeCCHHHHHHHHHHHHHcCCeEEeCChhhcccccceEEEEEECCCCCEEEEEEc
Confidence            9999974   8899999999999976432       457899999999999999986

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.63  E-value=3.6e-15  Score=127.95  Aligned_cols=115  Identities=13%  Similarity=0.184  Sum_probs=84.8

Q ss_pred             cceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEE--CCe--EEEEEecCCCCCCCCCCCCCCcc
Q 028083           88 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV--GAE--MIHLMELPNPDPLSGRPEHGGRD  163 (214)
Q Consensus        88 ~~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~--g~~--~l~l~~~~~~~~~~~~~~~g~g~  163 (214)
                      .+++.+++||.|.|.|++++++||+++|||++....+  +    .+++..  ++.  .+..+.. ..  +...+ ..+++
T Consensus       175 ~~~~~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~----~~~~~~~~~g~~~~~~~~~~-~~--~~~~~-~~~~~  244 (338)
T 1zsw_A          175 KHQIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRND--Q----EAIFQSIKGEAFGEIVVKYL-DG--PTEKP-GRGSI  244 (338)
T ss_dssp             GGSCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS--S----EEEEESSTTCSTTCEEEEEC-CS--SBCBC-CBTCE
T ss_pred             cccCceEEEEEEEECCHHHHHHHHHHhcCCEEEeecC--C----eEEEEecCCCCceEEEEecc-CC--CCCCC-CCCce
Confidence            4567899999999999999999999999999986543  1    233444  222  3343332 11  11111 12457


Q ss_pred             eEEEEEEC---CHHHHHHHHHhCCCeEEee--cCCceEEEEEcCCCCeEEEEee
Q 028083          164 RHTCIAIR---DVSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       164 ~hiaf~V~---dv~~~~~~l~~~G~~~~~~--~~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      .|++|.|+   |+++++++|+++|+++..+  ..+.+.+||+|||||.|||++.
T Consensus       245 ~hiaf~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~  298 (338)
T 1zsw_A          245 HHLAIRVKNDAELAYWEEQVKQRGFHSSGIIDRFYFKSLYFRESNGILFEIATD  298 (338)
T ss_dssp             EEEEEEESSHHHHHHHHHHHHHTTCCCCCCEECSSEEEEEEECTTCCEEEEEEE
T ss_pred             EEEEEEeCCHHHHHHHHHHHHHCCCceeeeeecCceEEEEEECCCCCEEEEEEc
Confidence            89999999   7999999999999987522  2457889999999999999975

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.63  E-value=5.3e-16  Score=134.31  Aligned_cols=125  Identities=14%  Similarity=0.216  Sum_probs=92.5

Q ss_pred             cceeeeEeEEEEEcC--CHHHHHHHHHHhcCCEEeeec--CCCCCCceEEEEEEC--CeEEEEEecCCCC--CCCCC---
Q 028083           88 DYGVVSVHHVGILCE--NLERSLEFYQNILGLEINEAR--PHDKLPYRGAWLWVG--AEMIHLMELPNPD--PLSGR---  156 (214)
Q Consensus        88 ~~~i~~i~HV~l~V~--D~~~a~~FY~~~LGf~~~~~~--~~~~~~~~~~~l~~g--~~~l~l~~~~~~~--~~~~~---  156 (214)
                      .+++++++||+|.|+  |++++++||+++|||++....  ..........|+..+  ...+.+++.....  ++...   
T Consensus       153 ~~~~~~l~Hv~l~V~~~D~~~~~~FY~~vLGf~~~~~~~~~~~~~~~~~~~l~~~~g~~~l~l~~~~~~~~~~~~~~~~~  232 (357)
T 2r5v_A          153 DVDLLGIDHFAICLNAGDLGPTVEYYERALGFRQIFDEHIVVGAQAMNSTVVQSASGAVTLTLIEPDRNADPGQIDEFLK  232 (357)
T ss_dssp             TCCCCEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEEEEEETTEEEEEEEEECTTSCCEEEEEEECTTSBCCHHHHHHH
T ss_pred             CCCcceEeEEEEEEchhhHHHHHHHHHHhcCCcEEEEEeeccCCcceEEEEEECCCCCEEEEEeeecCCCCCchhHHHHH
Confidence            466889999999999  999999999999999998432  112222355677763  4688888765321  11100   


Q ss_pred             CCCCCcceEEEEEECCHHHHHHHHHhCCCeEEeec-------------CC--------ceEEEEEcCCCCeEEEEee
Q 028083          157 PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK-------------SG--------RPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       157 ~~~g~g~~hiaf~V~dv~~~~~~l~~~G~~~~~~~-------------~g--------~~~~~~~DPdG~~iEl~~~  212 (214)
                      ...++|++||||+|+|+++++++|+++|+++...+             .+        ...+|++||||++|||++.
T Consensus       233 ~~~~~g~~Hiaf~v~Di~~~~~~L~~~Gv~~~~~p~~yy~~~~~r~~~~~~~~~~~~~~~~l~~~Dp~G~llqi~t~  309 (357)
T 2r5v_A          233 DHQGAGVQHIAFNSNDAVRAVKALSERGVEFLKTPGAYYDLLGERITLQTHSLDDLRATNVLADEDHGGQLFQIFTA  309 (357)
T ss_dssp             HHTSSEEEEEEEECSCHHHHHHHHHHTTCCBCCCCHHHHHTTTTTCCCSSSCHHHHHHHTCEEEEETTEEEEEEEBC
T ss_pred             hcCCCCccEEEEEcCCHHHHHHHHHHcCCCcCCCchhHHHHHHHhhccchhhHHHHHHcCeEEecCCCceEEEEEcc
Confidence            01356899999999999999999999999976442             11        1379999999999999984

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.62  E-value=3.1e-15  Score=126.35  Aligned_cols=107  Identities=17%  Similarity=0.223  Sum_probs=84.9

Q ss_pred             eeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECC--eEEEEEecCCCCCCCCCCCCCCcceEEE
Q 028083           90 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHTC  167 (214)
Q Consensus        90 ~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~--~~l~l~~~~~~~~~~~~~~~g~g~~hia  167 (214)
                      .+++++||.|.|+|++++++||+++|||++.....  .   ...|+..++  ..+.+....           ..+..|++
T Consensus         3 ~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~---~~~~~~~~~~~~~l~l~~~~-----------~~~~~~~~   66 (305)
T 2wl9_A            3 KVTELGYLGLSVSNLDAWRDYAAGIMGMQVVDDGE--D---DRIYLRMDRWHHRIVLHADG-----------SDDLAYIG   66 (305)
T ss_dssp             CCCEEEEEEEECSCHHHHHHHHTTTTCCEEECCSC--T---TEEEEECSSBSCSEEEECSS-----------CCEEEEEE
T ss_pred             ccceeeEEEEEeCCHHHHHHHHHhccCCEEeeccC--C---CeEEEEeCCCeEEEEEEECC-----------CCCeEEEE
Confidence            46899999999999999999999999999986211  1   235677765  456665321           24678999


Q ss_pred             EEEC---CHHHHHHHHHhCCCeEEeec-------CCceEEEEEcCCCCeEEEEee
Q 028083          168 IAIR---DVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       168 f~V~---dv~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      |.|+   |+++++++|+++|+++...+       .+.+.+||+|||||.|||++.
T Consensus        67 f~v~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~DPdG~~iel~~~  121 (305)
T 2wl9_A           67 WRVAGPVELDELAEQLKNAGIPFEVASDADAAERRVLGLVKLHDPGGNPTEIFYG  121 (305)
T ss_dssp             EECSSHHHHHHHHHHHHHTTCCCEECCHHHHHHTTEEEEEEEECTTCCEEEEEEE
T ss_pred             EEECCHHHHHHHHHHHHHCCCceEeCCcccccccCcEEEEEEECCCCCEEEEEEC
Confidence            9997   69999999999999976432       237889999999999999975

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.62  E-value=4.6e-15  Score=125.23  Aligned_cols=109  Identities=17%  Similarity=0.156  Sum_probs=84.6

Q ss_pred             cceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECC--eEEEEEecCCCCCCCCCCCCCCcceE
Q 028083           88 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRH  165 (214)
Q Consensus        88 ~~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~--~~l~l~~~~~~~~~~~~~~~g~g~~h  165 (214)
                      +|++++++||.|.|.|++++++||+++|||++....+  .   ...|+..++  ..+.+...  .         .++..|
T Consensus         4 ~m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~---~~~~~~~~~~~~~l~l~~~--~---------~~~~~~   67 (302)
T 2ehz_A            4 QAAVIELGYMGISVKDPDAWKSFATDMLGLQVLDEGE--K---DRFYLRMDYWHHRIVVHHN--G---------QDDLEY   67 (302)
T ss_dssp             CCCEEEEEEEEEECSCHHHHHHHHHHTTCCEEECCSC--S---SEEEEESSSBSCSEEEESS--C---------CSEEEE
T ss_pred             cccccEeeEEEEEeCCHHHHHHHHHhcCCCEEEeccC--C---cceEEEeCCCceEEEEecC--C---------CCCeeE
Confidence            5678999999999999999999999999999986422  1   235666543  23444321  1         135789


Q ss_pred             EEEEEC---CHHHHHHHHHhCCCeEEeec-------CCceEEEEEcCCCCeEEEEee
Q 028083          166 TCIAIR---DVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       166 iaf~V~---dv~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      ++|.|+   |+++++++|+++|+++...+       .+++.+||+|||||.|||++.
T Consensus        68 ~~~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  124 (302)
T 2ehz_A           68 LGWRVAGKPEFEALGQKLIDAGYKIRICDKVEAQERMVLGLMKTEDPGGNPTEIFWG  124 (302)
T ss_dssp             EEEEESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTEEEEEEEECTTSCEEEEEEE
T ss_pred             EEEEECCHHHHHHHHHHHHHCCCcEEECCccccccccceEEEEEECCCCCEEEEEEC
Confidence            999995   79999999999999976432       247889999999999999975

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.62  E-value=1.1e-14  Score=125.14  Aligned_cols=111  Identities=18%  Similarity=0.305  Sum_probs=84.9

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCe--EEEEEecCCCCCCCCCCCCCCcceEEEEE
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIA  169 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~--~l~l~~~~~~~~~~~~~~~g~g~~hiaf~  169 (214)
                      ..++||.|.|.|++++.+||+++|||++....+...    .+|+..++.  .+.+.....+      ...+.+..|++|.
T Consensus       158 ~~i~hv~L~v~Dl~~a~~FY~~vLG~~~~~~~~~~~----~~~l~~g~~~~~l~l~~~~~~------~~~~~~~~hiaf~  227 (330)
T 3zi1_A          158 DPVLKVTLAVSDLQKSLNYWCNLLGMKIYENDEEKQ----RALLGYADNQCKLELQGVKGG------VDHAAAFGRIAFS  227 (330)
T ss_dssp             CSEEEEEEEESCHHHHHHHHHHTTCCEEEEEETTTT----EEEEESSTTSCEEEEEECSSC------CCCBTTCCEEEEE
T ss_pred             CceeEEEEECCCHHHHHHHHHHhcCCEEEeeccCCc----EEEEEeCCceEEEEECCCCCC------CCCCCCCceEEEE
Confidence            458999999999999999999999999987654321    467777654  4444433211      1123456799999


Q ss_pred             EC--CHHHHHHHHHhCCCeEEee--------cCCceEEEEEcCCCCeEEEEee
Q 028083          170 IR--DVSKLKMILDKAGISYTLS--------KSGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       170 V~--dv~~~~~~l~~~G~~~~~~--------~~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      |+  |+++++++|+++|+++..+        ..+.+.+||+|||||.|||++.
T Consensus       228 v~~~dld~~~~rl~~~G~~i~~~~~~~~~pg~~g~~~~~f~DPdG~~iEl~~~  280 (330)
T 3zi1_A          228 CPQKELPDLEDLMKRENQKILTPLVSLDTPGKATVQVVILADPDGHEICFVGD  280 (330)
T ss_dssp             ECGGGHHHHHHHHHHTTCEEEEEEEEECCTTSCCEEEEEEECTTCCEEEEEEH
T ss_pred             EEcccHHHHHHHHHHcCCcEecCceecccCCCCceEEEEEECCCCCEEEEEEe
Confidence            96  8999999999999997432        2357899999999999999974

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.61  E-value=3.3e-14  Score=119.41  Aligned_cols=114  Identities=15%  Similarity=0.125  Sum_probs=82.3

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEEEEC
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR  171 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V~  171 (214)
                      ..+.|+.|.|.|++++++||+++|||++.........  ..+++..++..+..+. ...  +    ...+...|++|.|+
T Consensus       163 ~~~~~~~l~v~D~~~a~~FY~~vlG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~--~----~~~~~~~~~~~~v~  233 (282)
T 3oxh_A          163 GTLIWNELLTDKPDLALAFYEAVVGLTHSSMEIAAGQ--NYRVLKAGDAEVGGCM-EPP--M----PGVPNHWHVYFAVD  233 (282)
T ss_dssp             TSEEEEEEECSCHHHHHHHHHHHHCCEEEEC---------CEEEEETTEEEEEEE-CCS--S----TTCCSEEEEEEECS
T ss_pred             CccEEEEEEcCCHHHHHHHHHHHhCCeeeeccCCCCc--ceEEEEcCCccEeeec-CCC--C----CCCCCeEEEEEEeC
Confidence            5799999999999999999999999998864311111  2244566664433221 111  1    11234468999999


Q ss_pred             CHHHHHHHHHhCCCeEEee----cCCceEEEEEcCCCCeEEEEeecC
Q 028083          172 DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVDG  214 (214)
Q Consensus       172 dv~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~iEl~~~~~  214 (214)
                      |+++++++++++|+++..+    ..+++.++|+|||||.|||++..+
T Consensus       234 dvd~~~~~~~~~G~~~~~~p~~~~~~~~~~~~~DPdGn~~~l~~~~~  280 (282)
T 3oxh_A          234 DADATAAKAAAAGGQVIAEPADIPSVGRFAVLSDPQGAIFSVLKAAP  280 (282)
T ss_dssp             CHHHHHHHHHHTTCEEEEEEEEETTTEEEEEEECTTSCEEEEEEEC-
T ss_pred             CHHHHHHHHHHcCCEEecCCeEcCCCeEEEEEECCCCCEEEEEecCC
Confidence            9999999999999998543    245889999999999999999753

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.61  E-value=4.5e-15  Score=129.96  Aligned_cols=126  Identities=13%  Similarity=0.117  Sum_probs=96.8

Q ss_pred             CcceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecC-CCCCC-ceEEEEEECCeEEEEEecCCCCCC----CCC--CC
Q 028083           87 RDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARP-HDKLP-YRGAWLWVGAEMIHLMELPNPDPL----SGR--PE  158 (214)
Q Consensus        87 ~~~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~-~~~~~-~~~~~l~~g~~~l~l~~~~~~~~~----~~~--~~  158 (214)
                      +++.+++++||.|.|+|++++++||+++|||++..... ..+.+ .....+..|+..+.+..+..+.++    ...  ..
T Consensus        16 ~~~~i~~i~hV~i~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~~~~   95 (381)
T 1t47_A           16 DPFPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIKPATPWGHFLADHVAE   95 (381)
T ss_dssp             CCSCCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSCCSHHHHHHHHHHHH
T ss_pred             CCCcCceEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCCceEEEEEEecCCEEEEEecCCCCCCcchhHHHHHHHh
Confidence            46788999999999999999999999999999986422 12222 234456778888888876444332    111  23


Q ss_pred             CCCcceEEEEEECCHHHHHHHHHhCCCeEEeec------CC-ceEEEEEcCCCCeEEEEee
Q 028083          159 HGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK------SG-RPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       159 ~g~g~~hiaf~V~dv~~~~~~l~~~G~~~~~~~------~g-~~~~~~~DPdG~~iEl~~~  212 (214)
                      +++++.|+||+|+|+++++++++++|+++..++      .| ...++++||+|+.++|++.
T Consensus        96 ~g~gv~~iaf~V~D~~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~~pgg~~~~lv~~  156 (381)
T 1t47_A           96 HGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDR  156 (381)
T ss_dssp             HCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEE
T ss_pred             cCCceEEEEEEECCHHHHHHHHHHcCCEEeeccccccCCCCeEEEEEEecCCCcEEEEEec
Confidence            578999999999999999999999999986432      12 3578899999999999985

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.61  E-value=2.7e-15  Score=126.69  Aligned_cols=112  Identities=16%  Similarity=0.153  Sum_probs=81.1

Q ss_pred             eeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCC---CCCCceEEEEEECCe--EEEEEecCCCCCCCCCCCCCCcce
Q 028083           90 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPH---DKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDR  164 (214)
Q Consensus        90 ~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~---~~~~~~~~~l~~g~~--~l~l~~~~~~~~~~~~~~~g~g~~  164 (214)
                      .+.+++||.|.|.|++++++|| ++|||++......   .+......|+..++.  .+.+...  +        ..++++
T Consensus       143 ~~~~i~hv~l~v~D~~~s~~FY-~vLG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~--------~~~~~~  211 (305)
T 2wl9_A          143 EGQGLGHIIIREDDVEEATRFY-RLLGLEGAVEYKFALPNGAVGTPVFMHCNDRHHSLAFGVG--P--------MDKRIN  211 (305)
T ss_dssp             TTTCSCEEEECCSCHHHHHHHH-HHHTCEEEECBCEECTTSCEECCEEEESSSSSCSEEECCS--C--------CSSSEE
T ss_pred             CCceeeeEEEECCCHHHHHHHH-HHcCCeeeeeEecccCCCccceEEEEEcCCCceEEEEecC--C--------CCCCce
Confidence            3578999999999999999999 9999998743211   111223466666532  2332211  1        125689


Q ss_pred             EEEEEECC---HHHHHHHHHhCCCeEEeec-----CCceEEEEEcCCCCeEEEEee
Q 028083          165 HTCIAIRD---VSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       165 hiaf~V~d---v~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      |++|.|+|   +++++++|+++|+++..++     .+.+++||+|||||+|||++.
T Consensus       212 hiaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~  267 (305)
T 2wl9_A          212 HLMIEYTHLDDLGYAHDLVRQQKIDVTLQIGKHSNDEALTFYCANPSGWLWEPGWG  267 (305)
T ss_dssp             EEEEEESSHHHHHHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEEC
T ss_pred             EEEEEcCCHHHHHHHHHHHHHcCCCccccCcccCCCCcEEEEEECCCCCEEEEEeC
Confidence            99999998   6678899999999986432     236789999999999999874

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.61  E-value=3.5e-15  Score=125.90  Aligned_cols=109  Identities=17%  Similarity=0.170  Sum_probs=84.0

Q ss_pred             eeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECC--eEEEEEecCCCCCCCCCCCCCCcceEEE
Q 028083           90 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHTC  167 (214)
Q Consensus        90 ~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~--~~l~l~~~~~~~~~~~~~~~g~g~~hia  167 (214)
                      ++++++||.|.|.|++++++||+++|||++....+.     ..+|+..++  ..+.+......         .++..|++
T Consensus         4 ~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~-----~~~~l~~~~~~~~~~l~~~~~~---------~~~~~~~~   69 (307)
T 1mpy_A            4 GVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQ-----GRVYLKAWTEVDKFSLVLREAD---------EPGMDFMG   69 (307)
T ss_dssp             SEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECTT-----SCEEEECTTCCBSCSEEEEECS---------SCEEEEEE
T ss_pred             ccceeeeEEEEeCCHHHHHHHHHHccCCEEEeecCC-----CcEEEEecCCCCceEEEEccCC---------CCCcceEE
Confidence            468999999999999999999999999999865331     125666532  22333322111         13678999


Q ss_pred             EEE---CCHHHHHHHHHhCCCeEEeec-----CCceEEEEEcCCCCeEEEEee
Q 028083          168 IAI---RDVSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       168 f~V---~dv~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      |.|   +|+++++++|+++|+++...+     .+++.++|+|||||.|||++.
T Consensus        70 f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  122 (307)
T 1mpy_A           70 FKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYAD  122 (307)
T ss_dssp             EEESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESC
T ss_pred             EEeCCHHHHHHHHHHHHHcCCceecCCcccCCCceEEEEEECCCCCEEEEEEc
Confidence            999   799999999999999976543     246899999999999999974

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.61  E-value=1.8e-14  Score=125.64  Aligned_cols=108  Identities=20%  Similarity=0.250  Sum_probs=85.0

Q ss_pred             CcceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCe----EEEEEecCCCCCCCCCCCCCCc
Q 028083           87 RDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE----MIHLMELPNPDPLSGRPEHGGR  162 (214)
Q Consensus        87 ~~~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~----~l~l~~~~~~~~~~~~~~~g~g  162 (214)
                      ++..|++|+||.|.|+|++++++||+++|||++..+.+      ..+||+.++.    .+.+....           ..+
T Consensus        11 P~p~I~rl~hV~l~V~DLe~s~~FY~dvLGL~~~~~~~------~~~~lr~~~~~~~~~l~l~~~~-----------~~g   73 (365)
T 4ghg_A           11 PAPDILRCAYAELVVTDLAKSRNFYVDVLGLHVSYEDE------NQIYLRSFEEFIHHNLVLTKGP-----------VAA   73 (365)
T ss_dssp             CCCCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS------SEEEEECTTCCSSCSEEEEECS-----------SCE
T ss_pred             CCCCCCEEEEEEEEeCCHHHHHHHHhhCCCCEEEEEcC------CEEEEEeCCCCcceEEEeccCC-----------CCC
Confidence            34568999999999999999999999999999987633      3467776432    23333221           247


Q ss_pred             ceEEEEEEC---CHHHHHHHHHhCCCeEEeec-----CCceEEEEEcCCCCeEEEEe
Q 028083          163 DRHTCIAIR---DVSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQ  211 (214)
Q Consensus       163 ~~hiaf~V~---dv~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~iEl~~  211 (214)
                      +.|++|.|.   |++++.++|+++|+++....     .+++.++|+|||||.|||+.
T Consensus        74 l~~~a~~v~s~~dLd~~~~~L~~~Gv~v~~~~~~~~~~~g~~~~f~DPdG~~iEl~~  130 (365)
T 4ghg_A           74 LKAMAFRVRTPEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRVEDPLGFPYEFFF  130 (365)
T ss_dssp             EEEEEEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEEC
T ss_pred             cceEEEEeCCHHHHHHHHHHHHHcCCcceeccccccCCCceEEEEECCCCCEEEEEE
Confidence            899999998   58889999999999987543     23688999999999999985

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.60  E-value=1e-14  Score=124.55  Aligned_cols=109  Identities=19%  Similarity=0.227  Sum_probs=86.6

Q ss_pred             CcceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEE-CC---eEEEEEecCCCCCCCCCCCCCCc
Q 028083           87 RDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GA---EMIHLMELPNPDPLSGRPEHGGR  162 (214)
Q Consensus        87 ~~~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~-g~---~~l~l~~~~~~~~~~~~~~~g~g  162 (214)
                      .++++++++||.|.|.|++++++||+++|||++....+      ..+|++. ++   ..+.+....           ..+
T Consensus        11 ~~~~i~~l~hv~l~v~Dl~~a~~FY~~vlG~~~~~~~~------~~~~l~~~~~~~~~~l~l~~~~-----------~~~   73 (323)
T 1f1u_A           11 PAPDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE------NTIYLRSLEEFIHHNLVLRQGP-----------IAA   73 (323)
T ss_dssp             CCCCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS------SEEEEECTTCCSSCSEEEEECS-----------SCE
T ss_pred             CCcccceeeEEEEEeCCHHHHHHHHHhCCCCEEeeecC------CEEEEEecCCCCcEEEEEEECC-----------CCC
Confidence            46788999999999999999999999999999986532      2356664 32   244444321           236


Q ss_pred             ceEEEEEE---CCHHHHHHHHHhCCCeEEeecC-----CceEEEEEcCCCCeEEEEee
Q 028083          163 DRHTCIAI---RDVSKLKMILDKAGISYTLSKS-----GRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       163 ~~hiaf~V---~dv~~~~~~l~~~G~~~~~~~~-----g~~~~~~~DPdG~~iEl~~~  212 (214)
                      ..|++|.|   +|+++++++|+++|+++.....     +++.++|+||+||.|||++.
T Consensus        74 ~~~~~f~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~DP~G~~iel~~~  131 (323)
T 1f1u_A           74 VAAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYE  131 (323)
T ss_dssp             EEEEEEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECC
T ss_pred             eeEEEEEeCCHHHHHHHHHHHHhCCCcEEeccccccCCcceEEEEECCCCCEEEEEEe
Confidence            78999999   6899999999999999875432     47899999999999999875

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.60  E-value=2.1e-14  Score=123.52  Aligned_cols=108  Identities=13%  Similarity=0.259  Sum_probs=84.7

Q ss_pred             cceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEE-CC---eEEEEEecCCCCCCCCCCCCCCcc
Q 028083           88 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GA---EMIHLMELPNPDPLSGRPEHGGRD  163 (214)
Q Consensus        88 ~~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~-g~---~~l~l~~~~~~~~~~~~~~~g~g~  163 (214)
                      ++.+++++||.|.|+|++++++||+++|||++.....      ...|+.. ++   ..+.+....           ..++
T Consensus         6 ~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~------~~~~l~~~~~~~~~~l~l~~~~-----------~~g~   68 (339)
T 3lm4_A            6 RFDIAHLARAELFSPKPQETLDFFTKFLGMYVTHREG------QSVYLRGYEDPYPWSLKITEAP-----------EAGM   68 (339)
T ss_dssp             GGSEEEEEEEEEEESSHHHHHHHHHHTTCCEEEEEET------TEEEEECTTCSSSCSEEEEECS-----------SCEE
T ss_pred             CCCCcEEEEEEEEeCCHHHHHHHHHhcCCCEEEEecC------CEEEEEecCCCCceEEEEeeCC-----------CCCc
Confidence            4668999999999999999999999999999986522      2355655 22   223333221           2468


Q ss_pred             eEEEEEECC---HHHHHHHHHhCCCeEEeec---CCceEEEEEcCCCCeEEEEee
Q 028083          164 RHTCIAIRD---VSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       164 ~hiaf~V~d---v~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      .|++|.|+|   +++++++|+++|+++....   .+++.++|+|||||.|||+..
T Consensus        69 ~~~af~v~~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~f~DPdG~~iel~~~  123 (339)
T 3lm4_A           69 GHAAMRTSSPEALERRAKSLTDGNVDGTWSEDQFGYGKTFEYQSPDGHNLQLLWE  123 (339)
T ss_dssp             EEEEEEESSHHHHHHHHHHHHHTTCCEEEECCSTTBCCEEEEECTTCCEEEEECC
T ss_pred             ceEEEEeCCHHHHHHHHHHHHHCCCceeeccCCCCceEEEEEECCCCCEEEEEEe
Confidence            999999997   9999999999999987543   347899999999999999863

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.59  E-value=1e-14  Score=123.84  Aligned_cols=109  Identities=20%  Similarity=0.275  Sum_probs=87.2

Q ss_pred             cceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECC----eEEEEEecCCCCCCCCCCCCCCcc
Q 028083           88 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRD  163 (214)
Q Consensus        88 ~~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~----~~l~l~~~~~~~~~~~~~~~g~g~  163 (214)
                      .+++.+++||.|.|+|++++.+||+++|||++....+      ..+|+..++    ..+.+....           ..+.
T Consensus         3 ~~~i~~l~~v~l~v~Dl~~a~~FY~~vlG~~~~~~~~------~~~~l~~~~~~~~~~l~l~~~~-----------~~~~   65 (310)
T 3b59_A            3 LSRVTEIRYVGYGVKDFDAEKAFYADVWGLEPVGEDA------NNAWFKAQGADEHHVVQLRRAD-----------ENRI   65 (310)
T ss_dssp             CCCEEEEEEEEEEESSHHHHHHHHHHTTCCEEEEECS------SEEEEECTTSCCSCSEEEEECS-----------SCEE
T ss_pred             ceecceeeEEEEecCCHHHHHHHHHhCcCCEEeeecC------CeEEEEECCCCCCEEEEEEECC-----------CCCe
Confidence            3567899999999999999999999999999986532      236677755    556665421           2467


Q ss_pred             eEEEEEE---CCHHHHHHHHHhCCCeEEee------cCCceEEEEEcCCCCeEEEEeec
Q 028083          164 RHTCIAI---RDVSKLKMILDKAGISYTLS------KSGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       164 ~hiaf~V---~dv~~~~~~l~~~G~~~~~~------~~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      .|++|.|   +|+++++++|+++|+++...      ..+++.++|+||+||.|||++..
T Consensus        66 ~~~~~~v~~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  124 (310)
T 3b59_A           66 DVIALAADSRSDVDALRASVEAAGCKVASEPAVLATPGGGYGFRFFSPDGLLFEVSSDV  124 (310)
T ss_dssp             EEEEEEESSHHHHHHHHHHHHHHTCCBCCCSEECCSTTCCEEEEEECTTSCEEEEEECC
T ss_pred             eEEEEEeCCHHHHHHHHHHHHhCCCeEeecCccccccCCceEEEEECCCCCEEEEEEcc
Confidence            8999999   68999999999999987532      23578999999999999999753

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.58  E-value=1.4e-14  Score=121.69  Aligned_cols=112  Identities=13%  Similarity=0.245  Sum_probs=82.0

Q ss_pred             eeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCC---CCCCceEEEEEECC--eEEEEEecCCCCCCCCCCCCCCcce
Q 028083           90 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPH---DKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDR  164 (214)
Q Consensus        90 ~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~---~~~~~~~~~l~~g~--~~l~l~~~~~~~~~~~~~~~g~g~~  164 (214)
                      .+.+++||.|.|.|++++.+||+++|||++......   ++......|+..++  ..+.+...  +        ...+.+
T Consensus       139 ~~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~--~--------~~~~~~  208 (297)
T 1lgt_A          139 GEQGLGHFVRCVPDSDKALAFYTDVLGFQLSDVIDMKMGPDVTVPAYFLHCNERHHTLAIAAF--P--------LPKRIH  208 (297)
T ss_dssp             GGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCSEEEECC--C--------CSSSEE
T ss_pred             CccccceEEEecCCHHHHHHHHHHhcCCeeeeEEeccCCCCccceEEEEEeCCCcceEEEEcC--C--------CCCCce
Confidence            357899999999999999999999999998753211   11122446666543  23455432  1        125678


Q ss_pred             EEEEEECCHHHHH---HHHHhCCCeEEeec----CC-ceEEEEEcCCCCeEEEEee
Q 028083          165 HTCIAIRDVSKLK---MILDKAGISYTLSK----SG-RPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       165 hiaf~V~dv~~~~---~~l~~~G~~~~~~~----~g-~~~~~~~DPdG~~iEl~~~  212 (214)
                      |++|.|+|++++.   ++ +++|+++..++    .+ .+++||+|||||+|||++.
T Consensus       209 hiaf~v~d~~~~~~~~~~-~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~  263 (297)
T 1lgt_A          209 HFMLEVASLDDVGFAFDR-VDADGLITSTLGRHTNDHMVSFYASTPSGVEVEYGWS  263 (297)
T ss_dssp             EEEEEBSCHHHHHHHHHH-HHTTTCEEEEEEEESSSCCEEEEEECTTSCEEEEEEC
T ss_pred             EEEEeCCCHHHHHHHHHH-HhCCCcccccCcccCCCCcEEEEEECCCCcEEEEecC
Confidence            9999999987766   89 99999986432    22 5679999999999999874

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.58  E-value=6.8e-15  Score=124.16  Aligned_cols=111  Identities=14%  Similarity=0.148  Sum_probs=78.7

Q ss_pred             eeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCC---CCCCceEEEEEECCe--EEEEEecCCCCCCCCCCCCCCcceE
Q 028083           91 VVSVHHVGILCENLERSLEFYQNILGLEINEARPH---DKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRH  165 (214)
Q Consensus        91 i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~---~~~~~~~~~l~~g~~--~l~l~~~~~~~~~~~~~~~g~g~~h  165 (214)
                      .++++||.|.|+|++++.+|| ++|||++......   .+......|+..++.  .+.+..  .+        ..++.+|
T Consensus       147 ~~~l~hv~l~v~D~~~a~~FY-~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~--------~~~~~~h  215 (302)
T 2ehz_A          147 DQGLGHCIVRQTDVAEAHKFY-SLLGFRGDVEYRIPLPNGMTAELSFMHCNARDHSIAFGA--MP--------AAKRLNH  215 (302)
T ss_dssp             GGCSCEEEECCSCHHHHHHHH-HHTTCBCCEEEEEECTTSCEEEEEEEBSSSBSCSEEECS--CC--------CSSSEEE
T ss_pred             CCccceEEEEcCCHHHHHHHH-HhcCCeeeeEEeccCCCCcceEEEEEEeCCCCcEEEEec--CC--------CCCceeE
Confidence            368999999999999999999 9999998643110   111234456665432  222221  11        1246799


Q ss_pred             EEEEECCHH---HHHHHHHhCCCeEEeec-----CCceEEEEEcCCCCeEEEEee
Q 028083          166 TCIAIRDVS---KLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       166 iaf~V~dv~---~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      ++|.|+|++   +++++|+++|+++..++     .+.+++||+|||||.|||++.
T Consensus       216 iaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~  270 (302)
T 2ehz_A          216 LMLEYTHMEDLGYTHQQFVKNEIDIALQLGIHANDKALTFYGATPSGWLIEPGWR  270 (302)
T ss_dssp             EEEEESSHHHHHHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEEC
T ss_pred             EEEEcCCHHHHHHHHHHHHHCCCcEEeCCcccCCCCceEEEEECCCCcEEEEEEC
Confidence            999999866   46789999999986432     235789999999999999864

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.57  E-value=8.6e-15  Score=122.63  Aligned_cols=113  Identities=17%  Similarity=0.211  Sum_probs=81.6

Q ss_pred             ceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCC---CCCCceEEEEEECC--eEEEEEecCCCCCCCCCCCCCCcc
Q 028083           89 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPH---DKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRD  163 (214)
Q Consensus        89 ~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~---~~~~~~~~~l~~g~--~~l~l~~~~~~~~~~~~~~~g~g~  163 (214)
                      +.+.+++||.|.|+|++++++||+++|||++......   .+......|+..++  ..+.+...  +        ..++.
T Consensus       138 ~~~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~--------~~~~~  207 (292)
T 1kw3_B          138 TGDQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHTIALAAF--P--------IPKRI  207 (292)
T ss_dssp             CGGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCSEEEECC--S--------CSSSE
T ss_pred             cCCcccceEEEecCCHHHHHHHHHhccCCEEeeeeecccCCCccceEEEEEECCCcceEEEecC--C--------CCCce
Confidence            4568999999999999999999999999998753211   11122446676643  23444321  1        12567


Q ss_pred             eEEEEEECCHH---HHHHHHHhCCCeEEeec----C-CceEEEEEcCCCC-eEEEEee
Q 028083          164 RHTCIAIRDVS---KLKMILDKAGISYTLSK----S-GRPAIFTRDPDAN-ALEFTQV  212 (214)
Q Consensus       164 ~hiaf~V~dv~---~~~~~l~~~G~~~~~~~----~-g~~~~~~~DPdG~-~iEl~~~  212 (214)
                      +|++|.|+|++   +++++|+ +|+++..++    . +.+++||+||||| +|||++.
T Consensus       208 ~hiaf~v~d~~~v~~~~~~l~-~G~~~~~~p~~~~~~~~~~~y~~DPdG~~~iEl~~~  264 (292)
T 1kw3_B          208 HHFMLQANTIDDVGYAFDRLD-AAGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGWG  264 (292)
T ss_dssp             EEEEEEBSSHHHHHHHHHHHH-HTTCBCBCSEEESSSCCEEEEEECSSTTCEEEEEEC
T ss_pred             EEEEEEcCCHHHHHHHHHHHh-CCCceeecCcccCCCCeEEEEEECCCCCeeEEEEEC
Confidence            99999999765   4678999 999876432    2 3678899999999 9999874

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.57  E-value=7.4e-14  Score=117.27  Aligned_cols=116  Identities=16%  Similarity=0.183  Sum_probs=82.4

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEE-EEEecCCCCCCCCCCCCCCcceEEEEEE
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMI-HLMELPNPDPLSGRPEHGGRDRHTCIAI  170 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l-~l~~~~~~~~~~~~~~~g~g~~hiaf~V  170 (214)
                      ..+.|+.|.|.|++++++||+++||+++....+..+. ....++..++... .+...... .    +...+...+++|.|
T Consensus        31 g~~~~v~l~v~D~~~a~~FY~~vlG~~~~~~~~~~~~-~~~~~~~~~g~~~~~l~~~~~~-~----~~~~~~~~~~~~~v  104 (282)
T 3oxh_A           31 GTPNWVDLQTTDQSAAKKFYTSLFGWGYDDNPVPGGG-GVYSMATLNGEAVAAIAPMPPG-A----PEGMPPIWNTYIAV  104 (282)
T ss_dssp             TSEEEEEEEESCHHHHHHHHHHHHCCEEEEEC------CCEEEEEETTEEEEEEEECCSC-C-------CCCEEEEEEEC
T ss_pred             CCcEEEEEecCCHHHHHHHHHHhcCcEEeecCCCCCc-cCEEEEEeCCeeeEeeccCCCC-C----CCCCCCcEEEEEEe
Confidence            4799999999999999999999999998865332110 0223455555433 33332221 1    11123346899999


Q ss_pred             CCHHHHHHHHHhCCCeEEeec----CCceEEEEEcCCCCeEEEEeec
Q 028083          171 RDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       171 ~dv~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      +|+++++++++++|+++..++    ..++.++|+||+||.|||++..
T Consensus       105 ~d~d~~~~~l~~~G~~~~~~p~~~~~~g~~~~~~DP~G~~i~l~~~~  151 (282)
T 3oxh_A          105 DDVDAVVDKVVPGGGQVMMPAFDIGDAGRMSFITDPTGAAVGLWQAN  151 (282)
T ss_dssp             SCHHHHHTTTTTTTCEEEEEEEEETTTEEEEEEECTTCCEEEEEEES
T ss_pred             CCHHHHHHHHHHCCCEEEECCEecCCCeEEEEEECCCCCEEEEEEcc
Confidence            999999999999999986432    3578999999999999999864

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.56  E-value=2.7e-14  Score=123.56  Aligned_cols=122  Identities=15%  Similarity=0.080  Sum_probs=92.1

Q ss_pred             ceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCC--CCCCCCcceEE
Q 028083           89 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG--RPEHGGRDRHT  166 (214)
Q Consensus        89 ~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~--~~~~g~g~~hi  166 (214)
                      |.+++++||.|.|+|++++.+||.+.|||++.........  ....+..|+..+.+..+..+.++..  ...+++++.|+
T Consensus         1 ~~i~~l~hv~~~v~D~~~a~~fy~~~LGf~~~~~~~~~~g--~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~g~g~~~i   78 (357)
T 2r5v_A            1 MQNFEIDYVEMYVENLEVAAFSWVDKYAFAVAGTSRSADH--RSIALRQGQVTLVLTEPTSDRHPAAAYLQTHGDGVADI   78 (357)
T ss_dssp             -CCCEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTE--EEEEEEETTEEEEEEEESSTTSHHHHHHHHHSSEEEEE
T ss_pred             CCCceEEEEEEEECCHHHHHHHHHHcCCCeEEEEEcCCCc--eEEEEEeCCEEEEEeCCCCCCCHHHHHHHhcCCeEEEE
Confidence            4578999999999999999999999999999865321111  3344667888888876433322111  02256789999


Q ss_pred             EEEECCHHHHHHHHHhCCCeEEeec----CC-ceEEEEEcCCCCeEEEEee
Q 028083          167 CIAIRDVSKLKMILDKAGISYTLSK----SG-RPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       167 af~V~dv~~~~~~l~~~G~~~~~~~----~g-~~~~~~~DPdG~~iEl~~~  212 (214)
                      +|.|+|+++++++++++|+++...+    .| .....++||+|..++|++.
T Consensus        79 af~V~D~~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~~p~g~~~~lv~~  129 (357)
T 2r5v_A           79 AMATSDVAAAYEAAVRAGAEAVRAPGQHSEAAVTTATIGGFGDVVHTLIQR  129 (357)
T ss_dssp             EEEESCHHHHHHHHHHTTCCEEEEEECCC-CCCCEEEEECSTTCEEEEEEC
T ss_pred             EEEECCHHHHHHHHHHcCCeEeECcEecCCCeEEEEEEeccCCeEEEEEec
Confidence            9999999999999999999986432    23 3578899999999999875

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.55  E-value=4.6e-14  Score=125.31  Aligned_cols=127  Identities=13%  Similarity=0.093  Sum_probs=94.7

Q ss_pred             CcceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecC-CCCCCc-eEEEEEECCeEEEEEecCCCCC-----------C
Q 028083           87 RDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARP-HDKLPY-RGAWLWVGAEMIHLMELPNPDP-----------L  153 (214)
Q Consensus        87 ~~~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~-~~~~~~-~~~~l~~g~~~l~l~~~~~~~~-----------~  153 (214)
                      +.|.+++++||.|+|+|+++|++||++.|||++..... .++.+. ...+++.|+..+.+..+.++..           +
T Consensus        19 ~~~~i~~i~HV~i~V~Dle~a~~FY~~~LGf~~v~~~~~~~g~~~~~~~~l~~g~~~l~L~~~~~~~~~~~~~~~~~~~p   98 (424)
T 1sqd_A           19 DKFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLSAGEIKPTTTAS   98 (424)
T ss_dssp             CSSCEEEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEETTEEEEEEEECCGGGTTTCCGGGCCCS
T ss_pred             ccccCCeEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCceeEEEEEEcCCCEEEEEecCCCCcccccccccccccc
Confidence            57888999999999999999999999999999885532 222222 3345777888899987743321           0


Q ss_pred             C-CC---------CCCCCcceEEEEEECCHHHHHHHHHhCCCeEEeec----CCceEEEEEcCCCCeEEEEeec
Q 028083          154 S-GR---------PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       154 ~-~~---------~~~g~g~~hiaf~V~dv~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      . ..         ..+++|++|+||+|+|+++++++++++|+++...+    .+.....+++|+|+.++|++..
T Consensus        99 ~~~~~~~~~~~~~~~~g~gv~~iAf~VdDvdaa~~~l~a~Ga~~~~~P~~~~~~~~~~~i~~~Gg~~~~lvd~~  172 (424)
T 1sqd_A           99 IPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNEAVTIAEVKLYGDVVLRYVSYK  172 (424)
T ss_dssp             STTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTTEEEEEEEEETTEEEEEEEEC
T ss_pred             cccccchHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHcCCEEeecCcCCCCceEEEEEEcCCCcEEEEEecC
Confidence            0 00         13678999999999999999999999999976432    2345666778888888887653

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A

Probab=99.53  E-value=2.4e-13  Score=105.66  Aligned_cols=117  Identities=12%  Similarity=0.075  Sum_probs=78.7

Q ss_pred             eEeEEEEEcCC--HHHHHHHHHHhcCCEEeeec-------CCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCC--CC
Q 028083           93 SVHHVGILCEN--LERSLEFYQNILGLEINEAR-------PHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEH--GG  161 (214)
Q Consensus        93 ~i~HV~l~V~D--~~~a~~FY~~~LGf~~~~~~-------~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~--g~  161 (214)
                      .--++.|.|.|  +++|++||+++|||++....       +........+.+..++..+.+.... +.... ....  +.
T Consensus        24 ~~i~~~L~v~D~~~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~g~~l~l~~~~-~~~~~-~~~~~~~~  101 (166)
T 1xy7_A           24 TEFKQMLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSFVVCDVS-SLPGF-STAKSEGS  101 (166)
T ss_dssp             EEEEEEEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEETTEEEEEEEGG-GSTTC-CCCCTTSC
T ss_pred             ceEEEEEEECCcCHHHHHHHHHHHhCCEEEEEEccCCCCCCCCCCcEEEEEEEECCeEEEEeCCC-cccCC-ccccCCCC
Confidence            45688899999  99999999999999987532       1111222234467777766655421 11000 0111  23


Q ss_pred             cceEEEEEECCHHHHHHHHHhCCCeEEeecC-----CceEEEEEcCCCCeEEEEeec
Q 028083          162 RDRHTCIAIRDVSKLKMILDKAGISYTLSKS-----GRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       162 g~~hiaf~V~dv~~~~~~l~~~G~~~~~~~~-----g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      + .|++|.|+|+++++++|+++|.+ ..++.     .++.++|+||+||.|+|++..
T Consensus       102 g-~~l~~~vdDvda~~~~l~~~G~~-~~~~~~~~~~~~r~~~v~DP~G~~~~l~~~~  156 (166)
T 1xy7_A          102 G-VTFLLGTKDAEAAVAKAVDAGAV-KVEVTEAEVELGFKGKVTDPFGVTWIFAEKK  156 (166)
T ss_dssp             C-CEEEEECSCHHHHHHHHHHTTCE-ECCCCHHHHHTTEEEEEECTTSCEEEEEC--
T ss_pred             c-EEEEEEcCCHHHHHHHHHHCCCE-ECCcccccCcccEEEEEECCCCCEEEEEeec
Confidence            3 48999999999999999999999 64431     168999999999999998753

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.52  E-value=8.4e-14  Score=122.39  Aligned_cols=126  Identities=14%  Similarity=0.113  Sum_probs=98.2

Q ss_pred             CcceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeec-CCCCCCce-EEEEEECCeEEEEEecCCCCC-CCCC--CCCCC
Q 028083           87 RDYGVVSVHHVGILCENLERSLEFYQNILGLEINEAR-PHDKLPYR-GAWLWVGAEMIHLMELPNPDP-LSGR--PEHGG  161 (214)
Q Consensus        87 ~~~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~-~~~~~~~~-~~~l~~g~~~l~l~~~~~~~~-~~~~--~~~g~  161 (214)
                      +.+.+++++||.|+|+|++++++||.+.|||++.... .+++.+.. ..+++.|+..+.+..+..+++ +...  ..+|+
T Consensus         5 ~~~~i~~i~Hv~i~V~d~~~a~~fY~~~LGf~~v~~~~~e~g~r~~~~~~l~~G~i~~~L~~p~~p~s~~~a~fl~~hG~   84 (393)
T 3isq_A            5 ERGRFLHFHSVTFWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSHVIKQGKIVFVLSSALNPWNKEMGDHLVKHGD   84 (393)
T ss_dssp             SSCEEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSTTCHHHHHHHHHHCS
T ss_pred             CCCCCceEeEEEEEECCHHHHHHHHHHhcCCEEEEEEcCCCCcEEEEEEEEecCCEEEEEecCCCCCchHHHHHHHhcCC
Confidence            3567899999999999999999999999999998543 22233332 445778999999988766654 3221  34788


Q ss_pred             cceEEEEEECCHHHHHHHHHhCCCeEEeec------CC-ceEEEEEcCCCCeEEEEee
Q 028083          162 RDRHTCIAIRDVSKLKMILDKAGISYTLSK------SG-RPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       162 g~~hiaf~V~dv~~~~~~l~~~G~~~~~~~------~g-~~~~~~~DPdG~~iEl~~~  212 (214)
                      |++|+||+|+|+++++++++++|+++..++      .| .....+++|.|..+-|++.
T Consensus        85 Gv~~iAf~VdDvdaa~~ra~a~Ga~~v~eP~~~~~~~G~v~~a~I~~~Gd~~h~lVdr  142 (393)
T 3isq_A           85 GVKDIAFEVEDCDYIVQKARERGAKIMREPWVEQDKFGKVKFAVLQTYGDTTHTLVEK  142 (393)
T ss_dssp             EEEEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEE
T ss_pred             cEEEEEEEeCCHHHHHHHHHHCCCeEecCccccccCCceeEEEEEEeCCCcEEEEecc
Confidence            999999999999999999999999976433      12 4567789999999888863

>2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A*

Probab=99.50  E-value=6.6e-13  Score=110.69  Aligned_cols=109  Identities=14%  Similarity=0.078  Sum_probs=79.2

Q ss_pred             eEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECC----eEEEEEecCCCCCCCCCCCCCCcceEEEE
Q 028083           93 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRDRHTCI  168 (214)
Q Consensus        93 ~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~----~~l~l~~~~~~~~~~~~~~~g~g~~hiaf  168 (214)
                      ...++.+.|.|+++|++||+++|||++....+..   ....++..|+    ..+.+...+..        .++...+++|
T Consensus       183 ~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~  251 (301)
T 2zw5_A          183 LAVITELPVRDVAATLRLVEAALGARTAFAIGDP---PEFAEAALTPWSAGPRFRLAAVPGP--------GPVEPVRLHL  251 (301)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHSCCEEEEEEETT---EEEEEEESSSSSSSSEEEEEECCCS--------SCCCCCEEEE
T ss_pred             ceeEEEEEeCCHHHHHHHHHHhcCCeEeeecCCC---ccEEEEEcCCCccccccccccCCCc--------CCCCceEEEE
Confidence            4568889999999999999999999988432221   1223456655    33433221111        1223358999


Q ss_pred             EEC-CHHHHHHHHHhCCCeEEeec----CCceEEEEEcCCCCeEEEEee
Q 028083          169 AIR-DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       169 ~V~-dv~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      .|+ |+++++++++++|+++..++    .|.+.++|+|||||.|||.++
T Consensus       252 ~v~~dvd~~~~~~~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~~~~~~~  300 (301)
T 2zw5_A          252 DAAGTADSLHRRAVDAGARVDGPPVRRPWGRSEFVITLPEGHELTVSAP  300 (301)
T ss_dssp             EEESCHHHHHHHHHHTTCCEEEEEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred             EcCccHHHHHHHHHHcCCccccCcccCCCcceEEEEECCCCCEEEeeCC
Confidence            999 99999999999999986432    367899999999999999985

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.49  E-value=1e-13  Score=122.91  Aligned_cols=126  Identities=13%  Similarity=0.104  Sum_probs=92.4

Q ss_pred             CcceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecC-CCC-CCceEEEEEECCeEEEEEecCCCCC-----CC-----
Q 028083           87 RDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARP-HDK-LPYRGAWLWVGAEMIHLMELPNPDP-----LS-----  154 (214)
Q Consensus        87 ~~~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~-~~~-~~~~~~~l~~g~~~l~l~~~~~~~~-----~~-----  154 (214)
                      +++.+++++||.|.|+|++++++||.+.|||++..... +++ .....+++..|+..+.+.....+..     +.     
T Consensus        25 ~~~~i~~l~hV~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~G~~~~~~~~~~~G~~~l~L~~~~~~~~~~~~~p~~~~~~  104 (418)
T 1sp8_A           25 DRFHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGADAATAALPSFSA  104 (418)
T ss_dssp             CSSCEEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEETTEEEEEEEECCSSCCGGGCSSTTCCH
T ss_pred             ccccCceEEEEEEEeCCHHHHHHHHHHhCCCEEEEEEcCCCCCcceEEEEEeeCCEEEEEecCCCCcccccccccccccc
Confidence            56778999999999999999999999999999885532 222 1233445677898999987754421     00     


Q ss_pred             ---C--CCCCCCcceEEEEEECCHHHHHHHHHhCCCeEEeec----CCceEEEEEcCCCCeEEEEee
Q 028083          155 ---G--RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       155 ---~--~~~~g~g~~hiaf~V~dv~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~~~  212 (214)
                         .  ...+++|++|+||+|+|+++++++++++|+++...+    .+.....+++|+|..++|++.
T Consensus       105 ~~~~~~~~~hg~gv~~iAf~V~Dv~~a~~~l~~~Ga~~~~~p~~~~~~~~~~~i~~~Gg~~~~lvd~  171 (418)
T 1sp8_A          105 AAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRGFRLAEVELYGDVVLRYVSY  171 (418)
T ss_dssp             HHHHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEETTEEEEEEEEETTEEEEEEEC
T ss_pred             hhHHHHHhhcCCeeEEEEEEeCCHHHHHHHHHHCCCEEEeccccccCceEEEEEecCCCEEEEEEcc
Confidence               0  023678999999999999999999999999976433    223345556777777777654

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.45  E-value=3.4e-14  Score=123.17  Aligned_cols=126  Identities=13%  Similarity=0.091  Sum_probs=90.6

Q ss_pred             cceeeeEeEEEEEcC--CHHHHHHHHHHhcCCEEeeecC--CCCCC--ceEEEEEECCeEEEEEec-CCCCCCCCC---C
Q 028083           88 DYGVVSVHHVGILCE--NLERSLEFYQNILGLEINEARP--HDKLP--YRGAWLWVGAEMIHLMEL-PNPDPLSGR---P  157 (214)
Q Consensus        88 ~~~i~~i~HV~l~V~--D~~~a~~FY~~~LGf~~~~~~~--~~~~~--~~~~~l~~g~~~l~l~~~-~~~~~~~~~---~  157 (214)
                      ...+.+++||++.|+  |++++++||+++|||++.....  .....  ...+++..|+..++++++ ....++...   .
T Consensus       153 ~~~i~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~~~~~~~~~~~~~~~~  232 (357)
T 1cjx_A          153 GAGLKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLNEESSKGAGQIEEFLMQ  232 (357)
T ss_dssp             TTSEEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTTSSCEEEEEEECTTCCSHHHHHHHH
T ss_pred             CCCeeEECceEEeechhhHHHHHHHHHHhhCCceeeEEEeccCCcceEEEEEECCCCCEEEEEeeecCCCCChHHHhHHh
Confidence            456889999999999  9999999999999999875432  11111  123334446678999887 333222210   1


Q ss_pred             CCCCcceEEEEEECCHHHHHHHHHhCCCeEEe-ec-------------CCc--------eEEEEEc----CCCCeEEEEe
Q 028083          158 EHGGRDRHTCIAIRDVSKLKMILDKAGISYTL-SK-------------SGR--------PAIFTRD----PDANALEFTQ  211 (214)
Q Consensus       158 ~~g~g~~hiaf~V~dv~~~~~~l~~~G~~~~~-~~-------------~g~--------~~~~~~D----PdG~~iEl~~  211 (214)
                      ..++|++|+||+|+|+++++++|+++|+++.. .+             .+.        ..++-+|    |+|++++|++
T Consensus       233 ~~g~g~~HiAf~v~Di~~~~~~L~~~Gv~~~~~~p~~Yy~~l~~r~~~~~~~~~~l~~~~il~d~d~~~~~~g~llqift  312 (357)
T 1cjx_A          233 FNGEGIQHVAFLTDDLVKTWDALKKIGMRFMTAPPDTYYEMLEGRLPDHGEPVDQLQARGILLDGSSVEGDKRLLLQIFS  312 (357)
T ss_dssp             HTSSBCCEEEEEESCHHHHHHHHHHTTCCBCCCCCHHHHHTHHHHSTTCCCCHHHHHHHTCEEEEEEETTEEEEEEEEEB
T ss_pred             cCCCCeeEEEEEcCCHHHHHHHHHHcCCcccCCCChHHHHHHHHHhccccccHHHHHHcCeEEecCCCCCCCCeEEEEec
Confidence            14578999999999999999999999999865 22             111        1367788    8999999987


Q ss_pred             ec
Q 028083          212 VD  213 (214)
Q Consensus       212 ~~  213 (214)
                      .+
T Consensus       313 ~~  314 (357)
T 1cjx_A          313 ET  314 (357)
T ss_dssp             CC
T ss_pred             cC
Confidence            53

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.45  E-value=2.2e-13  Score=119.17  Aligned_cols=126  Identities=12%  Similarity=0.095  Sum_probs=90.4

Q ss_pred             cceeeeEeEEEEEcC--CHHHHHHHHHHhcCCEEeeecC-----CCCCCceEEEEEE--CCeEEEEEecCCC--CCCCCC
Q 028083           88 DYGVVSVHHVGILCE--NLERSLEFYQNILGLEINEARP-----HDKLPYRGAWLWV--GAEMIHLMELPNP--DPLSGR  156 (214)
Q Consensus        88 ~~~i~~i~HV~l~V~--D~~~a~~FY~~~LGf~~~~~~~-----~~~~~~~~~~l~~--g~~~l~l~~~~~~--~~~~~~  156 (214)
                      ...+.+++||++.|+  |++++++||+++|||++.....     .........++..  +..++.+.++...  .+....
T Consensus       179 ~~~~~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~i~~~~~~~~~~~l~~~~g~v~i~l~~~~~~~~~s~~~~  258 (381)
T 1t47_A          179 HRTFQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPALAKKKSQIDE  258 (381)
T ss_dssp             SCSCCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTTSCSEEEEEEECCSSSCCHHHH
T ss_pred             CCCceEEeEEEEeeccccHHHHHHHHHHhhCCEEeeecCcceeccCCccEEEEEEECCCCcEEEEEecCCcCCCccHHHH
Confidence            356789999999999  9999999999999999885421     1222334455554  3467888876522  111100


Q ss_pred             ---CCCCCcceEEEEEECCHHHHHHHHHhCCCeEEeecCC---------------------ceEEEEEcCCCCeEEEEee
Q 028083          157 ---PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSG---------------------RPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       157 ---~~~g~g~~hiaf~V~dv~~~~~~l~~~G~~~~~~~~g---------------------~~~~~~~DPdG~~iEl~~~  212 (214)
                         ...++|++||||+|+|+++++++|+++|+++...+..                     ...++-+||+|.+++|++.
T Consensus       259 ~l~~~~g~Gv~HiAf~vdDi~~~~~~L~~~Gv~~~~~p~~Yy~~l~~R~~~~~~~~~~l~~~~il~d~d~~g~llqift~  338 (381)
T 1t47_A          259 YLEFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTPDSYYDTLGEWVGDTRVPVDTLRELKILADRDEDGYLLQIFTK  338 (381)
T ss_dssp             HHHHHTSCEEEEEEEECSCHHHHHHHHHHTTCCBCCCCGGGTTSHHHHHCCCSSCHHHHHHHTCEEEECSSCEEEEEEBC
T ss_pred             HHHHhCCCCcceEEEecCCHHHHHHHHHHcCCccCCCCccHHHHHHHhccccchhHHHHHHhCeEEeeCCCCeEEEEecc
Confidence               1246789999999999999999999999998654211                     1146778999999998865


Q ss_pred             c
Q 028083          213 D  213 (214)
Q Consensus       213 ~  213 (214)
                      +
T Consensus       339 ~  339 (381)
T 1t47_A          339 P  339 (381)
T ss_dssp             C
T ss_pred             C
Confidence            3

>1u6l_A Hypothetical protein; structural genomics, PSI, protein STRU initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.81A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.41  E-value=2.2e-11  Score=92.78  Aligned_cols=112  Identities=13%  Similarity=0.006  Sum_probs=76.2

Q ss_pred             EEEEEcC-CHHHHHHHHHHhcCCEEeeec--CC--------CC--CCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCc
Q 028083           96 HVGILCE-NLERSLEFYQNILGLEINEAR--PH--------DK--LPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGR  162 (214)
Q Consensus        96 HV~l~V~-D~~~a~~FY~~~LGf~~~~~~--~~--------~~--~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g  162 (214)
                      +..|.|. |+++|++||+++||+++....  ..        ..  .....+-+..++..+.+.... +..  ..+ ...+
T Consensus         6 ~p~L~v~~d~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~~l~~~d~~-~~~--~~~-~~~g   81 (149)
T 1u6l_A            6 VPYLIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGSFALMASDNH-PAY--PYE-GIKG   81 (149)
T ss_dssp             EEEEEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETTEEEEEEECC-TTS--CCC-CCCS
T ss_pred             EEEEEECCCHHHHHHHHHHHhCCEEEEEEEcccCCcccCCCcccCCcEEEEEEEECCEEEEEEcCC-Ccc--CCC-CCCc
Confidence            3778888 999999999999999987531  11        00  122223366777666554321 110  111 1233


Q ss_pred             ceEEEEEECC---HHHHHHHHHhCCCeEEee----cCCceEEEEEcCCCCeEEEEeec
Q 028083          163 DRHTCIAIRD---VSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       163 ~~hiaf~V~d---v~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                       .+++|.|+|   +++++++|+ +|.++..+    ..|.+..+++||+|+.|+|.+..
T Consensus        82 -~~l~~~v~d~~evd~~~~~l~-~Gg~i~~p~~~~~wG~r~~~v~Dp~G~~w~l~~~~  137 (149)
T 1u6l_A           82 -CSISLNVDSKAEAERLFNALA-EGGSVQMPLGPTFWAASFGMFTDRFGVAWMVNCEQ  137 (149)
T ss_dssp             -EEEEEECSSHHHHHHHHHHHH-TTSEEEEEEEEETTEEEEEEEECTTSCEEEEEESC
T ss_pred             -eEEEEEcCCHHHHHHHHHHHH-CCCEEeecccccCcccceEEEECCCCCEEEEEEec
Confidence             489999998   889999986 78887543    34568899999999999998753

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.40  E-value=2.6e-13  Score=117.58  Aligned_cols=119  Identities=11%  Similarity=0.083  Sum_probs=89.0

Q ss_pred             CcceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCC--CCCCCCcce
Q 028083           87 RDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG--RPEHGGRDR  164 (214)
Q Consensus        87 ~~~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~--~~~~g~g~~  164 (214)
                      +||.+++++||.|.|+|++++.+|| +.|||++.......    ....+..|+..+.+...  +.++..  ...+|+++.
T Consensus         6 ~~~~i~~l~hV~~~V~D~~~~~~fy-~~LGf~~~~~~~~~----~~~l~~~g~~~l~l~~~--~~~~~~~~~~~~g~gv~   78 (357)
T 1cjx_A            6 NPMGLMGFEFIEFASPTPGTLEPIF-EIMGFTKVATHRSK----NVHLYRQGEINLILNNE--PNSIASYFAAEHGPSVC   78 (357)
T ss_dssp             CTTCEEEEEEEEEECSSTTSSHHHH-HHTTCEEEEEESSS----SEEEEEETTEEEEEECC--SSSHHHHHHHHHSSEEE
T ss_pred             CCcccceEEEEEEEeCCHHHHHHHH-HHCCCEEEEEeCCe----eEEEEecCCEEEEEECC--CCchhhhhhhhcCCeEE
Confidence            3688999999999999999999999 78999998653311    23445668877766642  222110  123678999


Q ss_pred             EEEEEECCHHHHHHHHHhCCCeEEeecC--C-ceEEEEEcCCCCeEEEEee
Q 028083          165 HTCIAIRDVSKLKMILDKAGISYTLSKS--G-RPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       165 hiaf~V~dv~~~~~~l~~~G~~~~~~~~--g-~~~~~~~DPdG~~iEl~~~  212 (214)
                      |+||+|+|+++++++++++|+++...+.  | .....+++|+|..++|++.
T Consensus        79 ~iaf~V~D~~~~~~~l~~~G~~~~~~~~~~g~~~~~~~~~~gg~~~~~vd~  129 (357)
T 1cjx_A           79 GMAFRVKDSQKAYNRALELGAQPIHIDTGPMELNLPAIKGIGGAPLYLIDR  129 (357)
T ss_dssp             EEEEEESCHHHHHHHHHHTTCCBCCCCCCTTCBCCCEEECGGGCEEEEECC
T ss_pred             EEEEEeCCHHHHHHHHHHcCCEEeecCCCCCcEEEEeeeCCCCeEEEEECC
Confidence            9999999999999999999998765432  2 3456778888888888764

>1u7i_A Hypothetical protein; structural genomics, PA1358, PSI, PROT structure initiative; HET: MSE; 1.40A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.39  E-value=3e-11  Score=90.39  Aligned_cols=114  Identities=11%  Similarity=0.110  Sum_probs=77.7

Q ss_pred             eeEeEEEEEcC--CHHHHHHHHHHhc-CCEEeee--cCC----CCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCc
Q 028083           92 VSVHHVGILCE--NLERSLEFYQNIL-GLEINEA--RPH----DKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGR  162 (214)
Q Consensus        92 ~~i~HV~l~V~--D~~~a~~FY~~~L-Gf~~~~~--~~~----~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g  162 (214)
                      .++. ..|.+.  |+++|++||+++| |+++...  .+.    .......+-+..++..+.+........   .+ .+.+
T Consensus         5 ~~i~-~~L~v~~~d~~~A~~FY~~~f~G~~~~~~~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~~~---~~-~~~~   79 (136)
T 1u7i_A            5 ARVR-PFLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGDQSVHCIDSHVRHA---FD-FTPA   79 (136)
T ss_dssp             CEEE-EEEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETTEEEEEEEESSCCS---CC-CCTT
T ss_pred             ccce-EEEEECCCCHHHHHHHHHHHcCCCEeeEEEEcccCCCCCCCcEEEEEEEECCEEEEEECCCCCCC---CC-CCCc
Confidence            3444 567775  9999999999999 9998742  111    112222333677776655443321111   11 1223


Q ss_pred             ceEEEEEECC---HHHHHHHHHhCCCeEEeec----CCceEEEEEcCCCCeEEEEee
Q 028083          163 DRHTCIAIRD---VSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       163 ~~hiaf~V~d---v~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~~~  212 (214)
                       ..++|.|+|   +++++++|+ +|.++..++    .|.+..+++||+||.|+|.+.
T Consensus        80 -~~l~~~v~d~~evd~~~~~l~-~Gg~v~~p~~~~~~G~~~~~~~Dp~G~~w~l~~~  134 (136)
T 1u7i_A           80 -FSFFVDCESNAQIERLAEALS-DGGKALMPLGDYGFSQRFAWLADRFGVSWQLNLA  134 (136)
T ss_dssp             -EEEEEECCCHHHHHHHHHHHH-TTSEEEEEEECCSSSSEEEEEECTTSCEEEEEEC
T ss_pred             -eEEEEEcCCHHHHHHHHHHHH-cCCEEecccccCCCcceEEEEECCCCCEEEEEec
Confidence             479999999   999999999 999876442    466889999999999999874

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.38  E-value=2.2e-12  Score=113.40  Aligned_cols=103  Identities=11%  Similarity=0.065  Sum_probs=77.5

Q ss_pred             CcceeeeEeEEEEEcCC--HHHHHHHHHHhcCCEEeeecC-----CCCCCceEEEEEE--CCeEEEEEecCC--CCCCCC
Q 028083           87 RDYGVVSVHHVGILCEN--LERSLEFYQNILGLEINEARP-----HDKLPYRGAWLWV--GAEMIHLMELPN--PDPLSG  155 (214)
Q Consensus        87 ~~~~i~~i~HV~l~V~D--~~~a~~FY~~~LGf~~~~~~~-----~~~~~~~~~~l~~--g~~~l~l~~~~~--~~~~~~  155 (214)
                      ....+++||||++.|+|  ++++++||+++|||+......     .+....+...+..  |..+++|+++..  .+++++
T Consensus       167 ~~~~l~~IDHv~i~V~~~~l~~a~~fY~~~lGf~~~~~~d~~~i~~~~~gl~s~~~~~~~g~v~i~L~ep~~~~~~s~I~  246 (393)
T 3isq_A          167 PKCSLEMIDHIVGNQPDQEMVSASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPGKKKSQIQ  246 (393)
T ss_dssp             CCCCEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEECTTTSBCSSCEEEEEEEECTTSSCEEEEEEEECCSBCCHHH
T ss_pred             CCCCeeEEeEEEEecCccHHHHHHHHHHHHhCCEEeccccccccccCCCcEEEEEEECCCCCEEEEEecCCCCCCCCHHH
Confidence            34578999999999998  999999999999999875422     1112233344544  457999998764  333322


Q ss_pred             C---CCCCCcceEEEEEECCHHHHHHHHHhCCCeEEe
Q 028083          156 R---PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTL  189 (214)
Q Consensus       156 ~---~~~g~g~~hiaf~V~dv~~~~~~l~~~G~~~~~  189 (214)
                      .   ...|+|++||||.|+|+.+++++|+++|+++..
T Consensus       247 ~fL~~~~G~Gi~HiA~~~dDi~~~~~~l~~~Gv~~l~  283 (393)
T 3isq_A          247 EYVDYNGGAGVQHIALKTEDIITAIRHLRERGLEFLS  283 (393)
T ss_dssp             HHHHHHTSSEEEEEEEEESCHHHHHHHHHHTTCCBCC
T ss_pred             HHHHHcCCCCcceEEEEcCCHHHHHHHHHHcCCccCC
Confidence            1   224789999999999999999999999999754

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.35  E-value=2.1e-12  Score=114.66  Aligned_cols=104  Identities=16%  Similarity=0.177  Sum_probs=77.1

Q ss_pred             CcceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCC-----CCceEEEEEE--CCeEEEEEecCC---CCCCCCC
Q 028083           87 RDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK-----LPYRGAWLWV--GAEMIHLMELPN---PDPLSGR  156 (214)
Q Consensus        87 ~~~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~-----~~~~~~~l~~--g~~~l~l~~~~~---~~~~~~~  156 (214)
                      ....+.+||||++.|+|++++++||+++|||++.+......     ......|+..  +..++.++++..   ..+....
T Consensus       196 ~~~~~~~idHv~i~V~dl~~a~~FY~~~LGf~~~~~~~~~d~~~~~~gl~s~~l~~~~g~~~l~l~e~~~~~~~~s~i~~  275 (424)
T 1sqd_A          196 LDYGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVLLPINEPVHGTKRKSQIQT  275 (424)
T ss_dssp             CCSSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTTSCSEEEEEEECCC---CCHHHH
T ss_pred             CcCCcceEeeEEEeeCCHHHHHHHHHHhhCCeEEEEEcccccccccccceEEEEEcCCCcEEEEEecccccCCCcchhhh
Confidence            34567899999999999999999999999999986543221     2334456654  457888888752   2222211


Q ss_pred             ---CCCCCcceEEEEEECCHHHHHHHHHh----CCCeEEee
Q 028083          157 ---PEHGGRDRHTCIAIRDVSKLKMILDK----AGISYTLS  190 (214)
Q Consensus       157 ---~~~g~g~~hiaf~V~dv~~~~~~l~~----~G~~~~~~  190 (214)
                         ...|.|++||||.|+|+.+++++|++    +|+++...
T Consensus       276 fl~~~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~  316 (424)
T 1sqd_A          276 YLEHNEGAGLQHLALMSEDIFRTLREMRKRSSIGGFDFMPS  316 (424)
T ss_dssp             HHHHHTSCEEEEEEEEESCHHHHHHHHHHHGGGTSCCBCCC
T ss_pred             hhhhcCCCCcCEEEEEeCCHHHHHHHHHhhhccCCcEEecC
Confidence               12577999999999999999999999    89998653

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.33  E-value=3e-12  Score=113.46  Aligned_cols=104  Identities=14%  Similarity=0.164  Sum_probs=77.3

Q ss_pred             CcceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCC-----CCceEEEEEE--CCeEEEEEecCC---CCCCCCC
Q 028083           87 RDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDK-----LPYRGAWLWV--GAEMIHLMELPN---PDPLSGR  156 (214)
Q Consensus        87 ~~~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~-----~~~~~~~l~~--g~~~l~l~~~~~---~~~~~~~  156 (214)
                      .+..+.+||||++.|+|++++++||+++|||++.+......     ......|+..  +..++.++++..   ..+....
T Consensus       193 ~~~~~~~idHv~i~V~dl~~a~~FY~~vLGf~~~~~~~~~d~~~~~~gl~s~~l~~~~g~i~l~l~e~~~~~~~~s~i~~  272 (418)
T 1sp8_A          193 ADYGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPVHGTKRRSQIQT  272 (418)
T ss_dssp             CCCSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSSCCEEEEEEECCCSSSCCHHHH
T ss_pred             CCCCcceEeeEEEecCCHHHHHHHHHHHcCCEEEEEecccccccccccceEEEEEcCCCcEEEEEeecccccCCCcchhh
Confidence            34567899999999999999999999999999986542211     1234566765  457888888752   2222111


Q ss_pred             ---CCCCCcceEEEEEECCHHHHHHHHHh----CCCeEEee
Q 028083          157 ---PEHGGRDRHTCIAIRDVSKLKMILDK----AGISYTLS  190 (214)
Q Consensus       157 ---~~~g~g~~hiaf~V~dv~~~~~~l~~----~G~~~~~~  190 (214)
                         ...|.|++||||+|+|+++++++|++    +|+++...
T Consensus       273 fl~~~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~  313 (418)
T 1sp8_A          273 FLDHHGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMAP  313 (418)
T ss_dssp             HHHHHTSSEEEEEEEEETTHHHHHHHHHTSGGGTSCCBCCC
T ss_pred             hhhccCCCCcCEEEEEeCCHHHHHHHHhhhhccCCeEEccC
Confidence               12477999999999999999999999    79998654

>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7

Probab=99.30  E-value=9.5e-11  Score=88.57  Aligned_cols=112  Identities=9%  Similarity=0.113  Sum_probs=76.7

Q ss_pred             eeeEeEEEEEcCCHHHHHHHHHHhc-CCEEeee--cCC----CCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcc
Q 028083           91 VVSVHHVGILCENLERSLEFYQNIL-GLEINEA--RPH----DKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRD  163 (214)
Q Consensus        91 i~~i~HV~l~V~D~~~a~~FY~~~L-Gf~~~~~--~~~----~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~  163 (214)
                      ++++...-++++|+++|++||+++| |+++...  ...    +......+-+..++..+...... +..       +.. 
T Consensus         3 ~~~i~p~l~~~~d~~eA~~FY~~~f~G~~~~~~~~~~~~~~~~~~~v~ha~l~~~~~~~m~~d~~-~~~-------~~~-   73 (139)
T 1tsj_A            3 IPKITTFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNGQVFMAIDAN-SGT-------ELP-   73 (139)
T ss_dssp             CCSEEEEEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETTEEEEEEC---------------C-
T ss_pred             CCceeEEEEECCCHHHHHHHHHHHcCCCEEEEEEecCcCCCCCCCcEEEEEEEECCEEEEEECCC-CCC-------Cce-
Confidence            3567777777789999999999999 9998742  111    11222334477787655443321 110       111 


Q ss_pred             eEEEEEECC---HHHHHHHHHhCCCeEEee----cCCceEEEEEcCCCCeEEEEee
Q 028083          164 RHTCIAIRD---VSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       164 ~hiaf~V~d---v~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      ..+++.|+|   +++++++|+ +|.++..+    ..|.+..+++||+|+.|+|.+.
T Consensus        74 ~sl~~~~~d~~evd~~~~~l~-~G~~v~~p~~~~~wG~~~g~v~Dp~G~~W~i~~~  128 (139)
T 1tsj_A           74 ISLFVTVKDTIEMERLFNGLK-DEGAILMPKTNMPPYREFAWVQDKFGVSFQLALP  128 (139)
T ss_dssp             CCEEEECSSHHHHHHHHHHHH-TTCEEEEEEEEETTEEEEEEEECTTSCEEEEEEC
T ss_pred             EEEEEECCCHHHHHHHHHHHh-CCCEEeecccccCCCceEEEEECCCCCEEEEeec
Confidence            468899987   788899998 68887644    3678999999999999999874

>3l20_A Putative uncharacterized protein; hypothetical protein, unknown function; 2.45A {Staphylococcus aureus}

Probab=99.23  E-value=8.6e-10  Score=86.33  Aligned_cols=111  Identities=13%  Similarity=-0.003  Sum_probs=77.0

Q ss_pred             EEEEEcCCHHHHHHHHHHhcCCEEeeecCC-----C---------CCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCC
Q 028083           96 HVGILCENLERSLEFYQNILGLEINEARPH-----D---------KLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGG  161 (214)
Q Consensus        96 HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~-----~---------~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~  161 (214)
                      ...|.+.|.++|++||+++||+++......     +         ....-.+.|.+++..+.+...... .    ...++
T Consensus        28 ~PyL~f~~a~eAi~FY~~vFG~~~~~~~~~~d~p~~~~~~~~~~~~g~v~hael~i~g~~lm~~D~~g~-~----~~~~~  102 (172)
T 3l20_A           28 FPYIAFENSKEALAYYEEVFGATDVKRLEVGEEQASHFGMTKEEAQEATMHAEFEVLGVKVLCSDSFGR-A----DKINN  102 (172)
T ss_dssp             EEEEEESCHHHHHHHHHHHSCCEEEEEEECCTTTTTTTTCCHHHHHTCEEEEEEEETTEEEEEEECTTC-C----CCCCS
T ss_pred             EEEEEECCHHHHHHHHHHHcCCEEEEEEEcccCCcccccCCcccCCCcEEEEEEEECCEEEEEECCCCC-C----CCCCC
Confidence            445556699999999999999997643211     0         122334558888877776653211 1    11223


Q ss_pred             cceEEEEEE--------CCHHHHHHHHHhCC-CeEEee----cCCceEEEEEcCCCCeEEEEee
Q 028083          162 RDRHTCIAI--------RDVSKLKMILDKAG-ISYTLS----KSGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       162 g~~hiaf~V--------~dv~~~~~~l~~~G-~~~~~~----~~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      + ..+++.+        +|+++++++|.+.| +++..+    ..|.+..+++||+|+.|+|...
T Consensus       103 ~-~sl~l~~~~~d~~~~~dvd~~~~~l~~~G~a~v~~p~~~~~wG~r~g~v~DpfG~~W~i~~~  165 (172)
T 3l20_A          103 G-ISLLIDYDVNNKEDADKVEAFYEQIKDHSSIEIELPFADQFWGGKMGVFTDKYGVRWMLHGQ  165 (172)
T ss_dssp             S-EEEEEEEETTCHHHHHHHHHHHHHHTTCTTCEEEEEEEECTTSSEEEEEECTTSCEEEEEEE
T ss_pred             c-EEEEEEEccCccCcHHHHHHHHHHHHhCCCceEecCccccCCCcEEEEEECCCCCEEEEEeC
Confidence            3 3466666        58999999999999 677644    3577899999999999999754

>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} SCOP: d.32.1.0

Probab=99.12  E-value=3.8e-09  Score=79.64  Aligned_cols=109  Identities=10%  Similarity=0.075  Sum_probs=74.7

Q ss_pred             EEEcC-CHHHHHHHHHHhcC-CEEeee--c----CCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEEE
Q 028083           98 GILCE-NLERSLEFYQNILG-LEINEA--R----PHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  169 (214)
Q Consensus        98 ~l~V~-D~~~a~~FY~~~LG-f~~~~~--~----~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~  169 (214)
                      .|.+. |.++|++||+++|| .++...  .    +........+.|..++..+.+.........    ..+.+ ..+++.
T Consensus        14 ~L~f~g~a~eA~~FY~~vFg~~~i~~~~~~~~~~~~~~g~v~ha~l~i~g~~lm~~d~~~~~~~----~~~~~-~~l~l~   88 (138)
T 3oms_A           14 FLMFEGKAEEAMNFYTSLFDQSEIVSISRYDENGPGKEGTVIHATFTLNGQEFMCIDSYVNHNF----TFTPA-MSLYVT   88 (138)
T ss_dssp             EEEESSCHHHHHHHHHTTSTTCCEEEEEECCTTCSSCTTSEEEEEEEETTEEEEEEECSSCCSC----CCCTT-SCEEEE
T ss_pred             EEEECCCHHHHHHHHHHHcCCceEEEEEecCCCCCCCCCcEEEEEEEECCEEEEEEcCCCCCCC----CCCCC-EEEEEE
Confidence            34444 99999999999999 566421  1    122333445668888877776653322111    12223 469999


Q ss_pred             ECC---HHHHHHHHHhCCCeEEee----cCCceEEEEEcCCCCeEEEEee
Q 028083          170 IRD---VSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       170 V~d---v~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      |+|   +++++++|+ .|.++..+    ..|.+..+++||+|+.|.|...
T Consensus        89 ~~d~~evd~~~~~l~-~Gg~v~~p~~~~~wg~~~~~~~Dp~G~~W~i~~~  137 (138)
T 3oms_A           89 CETEEEIDTVFHKLA-QDGAILMPLGSYPFSKKFGWLNDKYGVSWQLTLA  137 (138)
T ss_dssp             ESSHHHHHHHHHHHH-TTCEEEEEEEEETTEEEEEEEECTTSCEEEEEEC
T ss_pred             cCCHHHHHHHHHHHH-cCCeEecCcccccCCcEEEEEECCCCCEEEEEeC
Confidence            999   999999996 57776543    3567899999999999999753

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=99.00  E-value=4.6e-09  Score=85.85  Aligned_cols=108  Identities=15%  Similarity=0.077  Sum_probs=73.9

Q ss_pred             eEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECC--eEEEEEecCCCCCCCCCCCCCCcceEE---E
Q 028083           93 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHT---C  167 (214)
Q Consensus        93 ~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~--~~l~l~~~~~~~~~~~~~~~g~g~~hi---a  167 (214)
                      -.-+.+|.|.|.+++.+||+++|||++..+..      ..++|..++  ..+.+-+.+....     ....|.-|+   +
T Consensus        10 ~~~~p~LrV~nr~~~~~FY~~vlG~kll~ee~------~~a~lg~~~~~~~L~lEEsp~~~~-----~~~~Glkh~a~i~   78 (244)
T 3e0r_A           10 VRIIPTLKANNRKLNETFYIETLGMKALLEES------AFLSLGDQTGLEKLVLEEAPSMRT-----RKVEGRKKLARLI   78 (244)
T ss_dssp             EEEEEEEEESSHHHHHHHHTTTTCCEEEEECS------SEEEEECTTCCEEEEEEECCTTTC-----BCCCSSCSEEEEE
T ss_pred             EEEeeEEEECCHHHHHHHHHhccCcEEeeccC------cEEEeecCCCcceEEEEeCCCccc-----ccccccceeeeEE
Confidence            35678999999999999999999999886543      235565533  2444444332211     234566677   5


Q ss_pred             EEECCHHHHHHHHHhCCCeEE--eecCCceEEEEEcCCCCeEEEEee
Q 028083          168 IAIRDVSKLKMILDKAGISYT--LSKSGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       168 f~V~dv~~~~~~l~~~G~~~~--~~~~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      +-|++-.++-.-|.. +.++.  ...+.++.+|+.||+||.||++.-
T Consensus        79 i~vp~~~el~~lL~~-~~~~~~~~~gdhgyA~yl~dPEGn~ieiyae  124 (244)
T 3e0r_A           79 VKVENPLEIEGILSK-TDSIHRLYKGQNGYAFEIFSPEDDLILIHAE  124 (244)
T ss_dssp             EEESSHHHHHHHHTT-CSCCSEEEECSSSEEEEEECTTCCEEEEECC
T ss_pred             EEcCCHHHHHHHHhc-ccccccccccCCcEEEEEECCCCCeEEEEEc
Confidence            999987776555554 55542  233446789999999999999864

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=98.33  E-value=6e-07  Score=75.06  Aligned_cols=94  Identities=12%  Similarity=0.199  Sum_probs=66.7

Q ss_pred             cceeeeEeEEEEEcCCHHHHHHHHHHhcC-----CEEeeecCCCCCCceEEEEEECCeEEEEEecCCCC----------C
Q 028083           88 DYGVVSVHHVGILCENLERSLEFYQNILG-----LEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPD----------P  152 (214)
Q Consensus        88 ~~~i~~i~HV~l~V~D~~~a~~FY~~~LG-----f~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~----------~  152 (214)
                      ..|+.++||+++.|.+++        .||     |++.........+.....+..++..++++....+.          .
T Consensus        19 ~~M~~~lDHlVi~v~~l~--------~lG~~~~~f~~~~GG~H~~~GT~N~Li~fdg~YLElIai~~~~~~~~~~~~~~~   90 (274)
T 3p8a_A           19 SHMILKFDHIIHYIDQLD--------RFSFPGDVIKLHSGGYHHKYGTFNKLGYINENYIELLDVENNEKLKKMAKTIEG   90 (274)
T ss_dssp             --CCCEEEEEEEECTTGG--------GCCCGGGSSCCEEEEEETTTTEEEEEEECSSSEEEEEEESCHHHHHHHTTSTGG
T ss_pred             cCccccCCEEEEEeccHH--------HcCCccceEEeCCCccCCCCCCEEEEEeeCCEEEEEEeecCcccccccccccCc
Confidence            457789999999999874        477     88776443333333333344488899999876531          1


Q ss_pred             --CCCC----CCCCCcceEEEEEECCHHHHHHHHHhCCCeEEe
Q 028083          153 --LSGR----PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTL  189 (214)
Q Consensus       153 --~~~~----~~~g~g~~hiaf~V~dv~~~~~~l~~~G~~~~~  189 (214)
                        ...+    ...++|+.++|+.++|+++..+++.++|+.+..
T Consensus        91 ~~~f~~~~~~~~~geGl~~~alrt~Di~a~~a~l~~~Gl~~~~  133 (274)
T 3p8a_A           91 GVAFATQIVQEKYEQGFKNICLHTNDIEAVKNKLQSEQVEVVG  133 (274)
T ss_dssp             GTCTTTHHHHTTTCCEEEEEEEECSCHHHHHHHHHTTTCEEEE
T ss_pred             cchHHHHhhhhccCCCeEEEEEecCCHHHHHHHHHHcCCCcCC
Confidence              1111    235789999999999999999999999998653

>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=98.26  E-value=4.7e-05  Score=58.75  Aligned_cols=98  Identities=13%  Similarity=0.025  Sum_probs=67.5

Q ss_pred             CCHHHHHHHHHHhc-CCEEee--ecCC----C-CCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEEEECC-
Q 028083          102 ENLERSLEFYQNIL-GLEINE--ARPH----D-KLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD-  172 (214)
Q Consensus       102 ~D~~~a~~FY~~~L-Gf~~~~--~~~~----~-~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V~d-  172 (214)
                      +|.++|++||+++| |.++..  ..+.    + ....-++-|..++..+.+... .+.    .+ ...+ ..+.+.++| 
T Consensus        15 g~a~eAi~FY~~vF~ga~i~~~~~~~~~~~~~~~g~Vmhael~i~g~~~m~~d~-~p~----~~-~~~~-~sl~v~~~d~   87 (163)
T 1u69_A           15 SAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMGIPCLGLNG-GPA----FR-HSEA-FSFQVATDDQ   87 (163)
T ss_dssp             SCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETTEEEEEEEC-CTT----CC-CCTT-EEEEEEESSH
T ss_pred             CCHHHHHHHHHHHhCCCEEeEEEeccCCCCCCCCCeEEEEEEEECCEEEEEECC-CCC----cC-CCCc-eEEEEEeCCH
Confidence            59999999999999 998873  2211    1 223444558888876666542 111    11 1233 368888887 


Q ss_pred             --HHHHHHHHHhCCCeEEeecCCceEEEEEcCCCCeEEEEee
Q 028083          173 --VSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       173 --v~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdG~~iEl~~~  212 (214)
                        +++++++|.+.|.++.  .    .-.++||.|+.|.|...
T Consensus        88 ~e~d~~~~~L~~~Gg~v~--~----~G~v~D~fGv~W~i~~~  123 (163)
T 1u69_A           88 AETDRLWNAIVDNGGEES--A----CGWCRDKWGISWQITPR  123 (163)
T ss_dssp             HHHHHHHHHHHHTTCEEC--S----TTEEECTTSCEEEEEEH
T ss_pred             HHHHHHHHHHHhCCCEEE--E----EEEEECCCCCEEEEEeE
Confidence              7788999997788776  2    33799999999998753

>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=98.04  E-value=1.1e-05  Score=77.13  Aligned_cols=120  Identities=19%  Similarity=0.234  Sum_probs=74.6

Q ss_pred             eeeEeEEEEEc---CCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEE--CCeEEEEEecCCCC--------------
Q 028083           91 VVSVHHVGILC---ENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV--GAEMIHLMELPNPD--------------  151 (214)
Q Consensus        91 i~~i~HV~l~V---~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~--g~~~l~l~~~~~~~--------------  151 (214)
                      +.|...+.++.   .-++++++||.+.|+++......   ......+|..  +..-+++...+...              
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (941)
T 3opy_B            7 FNGTSFITLFAPNISLLQASIDFYTNFLGFAIRKNSN---QKLFWLQLEEDQNNVSIQLILDPEHAASVSQIDQNIRNLT   83 (941)
T ss_dssp             SCEEEEEEEECCC-CC-HHHHHHHHHTTCCEECSSCS---CCC---EECCTTSCCEEEEECSSCSCHHHHHHHHHHHCCC
T ss_pred             ecceeEEEEEeCCHHHHHHHHHHHHhhccceeccccC---CcceeEEEecCCCeEEEEEEeccccchhHHHHHHHHhhhh
Confidence            35666677764   67899999999999997654221   1112234432  23344443321110              


Q ss_pred             CCCCCCCCCCcceEEEEEECCHHHHHHHHHhCCCeEEeecC--CceEEEEEcCCCCeEEEEeec
Q 028083          152 PLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS--GRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       152 ~~~~~~~~g~g~~hiaf~V~dv~~~~~~l~~~G~~~~~~~~--g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      .......+.....|++|.++|++++.++|.+.+.++-..+.  +...+|..||+||.|+|.+..
T Consensus        84 ~~~~~~dW~~~~~~l~f~~~dL~~~~~~L~~~~~~~Q~~ps~~~~~e~yt~DPlGNvIgfs~~~  147 (941)
T 3opy_B           84 RSLYRKDWRSIQSNIAFKSSSLSKLVKLLKDGGHPVQQSPNEISPFEVYTVDPLGSLIGFSGFK  147 (941)
T ss_dssp             ----------CCCEEEEEESCHHHHHHHHHTTTCCCBCSSSSCSCEEECCSSCCEEEECC-CCS
T ss_pred             cccccccccccCceEEEEeCCHHHHHHHHHhcCCccccCCCcCCCceEEeECCCCCEEEEeccC
Confidence            00111223344569999999999999999999998876555  678999999999999998753

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=96.54  E-value=0.0026  Score=52.13  Aligned_cols=33  Identities=12%  Similarity=0.173  Sum_probs=30.0

Q ss_pred             ceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeee
Q 028083           89 YGVVSVHHVGILCENLERSLEFYQNILGLEINEA  122 (214)
Q Consensus        89 ~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~  122 (214)
                      ..+++++||+|.|+|++++.+|| +.|||+....
T Consensus       154 ~~i~glghV~L~v~d~~~~~~fl-~~LG~~~~~~  186 (252)
T 3pkv_A          154 DQLLSIGEINITTSDVEQAATRL-KQAELPVKLD  186 (252)
T ss_dssp             GGCCEEEEEEEECSCHHHHHHHH-HHTTCCCCGG
T ss_pred             HHCcEeeeEEEEeCCHHHHHHHH-HHcCCCcccC
Confidence            44689999999999999999999 8999998864

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=96.43  E-value=0.0026  Score=51.86  Aligned_cols=89  Identities=9%  Similarity=0.100  Sum_probs=61.5

Q ss_pred             EeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEEEEC--
Q 028083           94 VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR--  171 (214)
Q Consensus        94 i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V~--  171 (214)
                      + ||.|.|.|.+++  ||++ +|+                     +..+.+++..+++-+. .+...-|+..+-|.|+  
T Consensus       153 i-~I~LnV~d~~~s--Fy~~-~~~---------------------~~~~~F~~a~G~dl~~-~~~~t~gLe~l~~~v~~~  206 (244)
T 3e0r_A          153 I-SMELHLPTDIES--FLES-SEI---------------------GASLDFIPAQGQDLTV-DNTVTWDLSMLKFLVNEL  206 (244)
T ss_dssp             E-EEEEEECTTCCC--SCCH-HHH---------------------TTTEEEEECCCTTTTC-CTTSBSSEEEEEEEESSC
T ss_pred             E-EEEEEcCchHHH--Hhhc-cCC---------------------cccEEEEcccCCCCCC-CCCCccCceEEEEEeCHH
Confidence            5 999999999998  9986 544                     1113444443333222 2233456778888887  


Q ss_pred             CHHHHHHHHHhCCCeEEeecCCceEEEEEcCCCCeEEEEe
Q 028083          172 DVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQ  211 (214)
Q Consensus       172 dv~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdG~~iEl~~  211 (214)
                      |+.++.++|.+.|+.+.   .....+.+.||.|+.|=|.+
T Consensus       207 dl~~l~~~L~~~g~~id---kk~~~l~~~DpsgIeiwF~~  243 (244)
T 3e0r_A          207 DIASLRQKFESTEYFIP---KSEKFFLGKDRNNVELWFEE  243 (244)
T ss_dssp             CHHHHHHHTTTSCEECC---TTCCEEEEECTTSCEEEEEE
T ss_pred             HHHHHHHHHHhCCceEc---ccCCEEEEECCCCCEEEEEE
Confidence            78899999999887333   22457889999999988765

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=93.38  E-value=0.34  Score=33.08  Aligned_cols=50  Identities=20%  Similarity=0.294  Sum_probs=38.5

Q ss_pred             cceEEEEEECCHHHHHHHHHh-CCCeEEeecCCceEEEEEcCCCCeEEEEee
Q 028083          162 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       162 g~~hiaf~V~dv~~~~~~l~~-~G~~~~~~~~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      ++.|+.+.|+|++++.+.+++ .|++...... ....++..++|..+++.+.
T Consensus         3 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~-~~~~~~~~~~~~~l~l~~~   53 (113)
T 1xqa_A            3 GIKHLNLTVADVVAAREFLEKYFGLTCSGTRG-NAFAVMRDNDGFILTLMKG   53 (113)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHCCEEEEEET-TTEEEEECTTCCEEEEEEC
T ss_pred             eeEEEEEEeCCHHHHHHHHHHhCCCEEeccCC-CcEEEEEcCCCcEEEEEeC
Confidence            578999999999999998876 7998865432 2345666677888888764

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=93.04  E-value=0.3  Score=34.36  Aligned_cols=52  Identities=12%  Similarity=0.116  Sum_probs=38.3

Q ss_pred             CcceEEEEEECCHHHHHHHHHhCCCeEEee----c-CCceEEEEEcCCCCeEEEEeec
Q 028083          161 GRDRHTCIAIRDVSKLKMILDKAGISYTLS----K-SGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       161 ~g~~hiaf~V~dv~~~~~~l~~~G~~~~~~----~-~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      -++.|+++.|+|++++.+.++..|.+....    . .+....++.. +|..||+.+..
T Consensus         6 ~~i~hv~i~v~Dl~~a~~FY~~lG~~~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~~   62 (133)
T 3hdp_A            6 LKVHHIGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVIN-GGYRVELVAPD   62 (133)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCEECSCCEEETTTTEEEEEEEE-TTEEEEEEEES
T ss_pred             eeeCEEEEEECCHHHHHHHHHHcCCeeecceeccCCcceEEEEEeC-CCEEEEEEecC
Confidence            468999999999999999998889987432    2 2334444444 67789988753

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=93.02  E-value=0.47  Score=34.02  Aligned_cols=54  Identities=11%  Similarity=0.164  Sum_probs=42.0

Q ss_pred             CCcceEEEEEECCHHHHHHHHHh-CCCeEEeec----------CCceEEEEEcCCCCeEEEEeec
Q 028083          160 GGRDRHTCIAIRDVSKLKMILDK-AGISYTLSK----------SGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       160 g~g~~hiaf~V~dv~~~~~~l~~-~G~~~~~~~----------~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      -.++.|+++.|+|++++.+.+++ .|+++....          ..+...++.-++|..++|.+.+
T Consensus        17 ~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~   81 (156)
T 3kol_A           17 LRKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDLFGEP   81 (156)
T ss_dssp             SCCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTTSEEEEECTTSCEEEEEECT
T ss_pred             cceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCCcEEEEEeCCCCEEEEEecC
Confidence            35789999999999999999987 799986521          1234567777888999998753

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=92.62  E-value=0.38  Score=33.26  Aligned_cols=52  Identities=15%  Similarity=0.144  Sum_probs=39.6

Q ss_pred             cceEEEEEECCHHHHHHHHH-hCCCeEEee----cCCceEEEEEcCCCCeEEEEeec
Q 028083          162 RDRHTCIAIRDVSKLKMILD-KAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       162 g~~hiaf~V~dv~~~~~~l~-~~G~~~~~~----~~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      ++.|+++.|+|++++.+.++ ..|.+....    ..+...+++..++|..|+|.+.+
T Consensus         3 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~   59 (127)
T 3e5d_A            3 KIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFEDGARLEIMSRT   59 (127)
T ss_dssp             CCCEEEEECSSHHHHHHHHHHHHCCEECCCEEEGGGTEEEEEEECSSSCEEEEEEET
T ss_pred             EEEEEEEEECCHHHHHHHHHHhcCCeeecccccCCCCccEEEEEcCCCcEEEEEecC
Confidence            47899999999999999885 469987533    12345566776779999998764

>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*

Probab=92.60  E-value=0.016  Score=42.83  Aligned_cols=88  Identities=14%  Similarity=0.112  Sum_probs=56.4

Q ss_pred             cccccccccEEeeeeccccccccccccceeeccccccceeeeceeeeeece-eeecCccCccchhhhccCCCCccccCCc
Q 028083           10 AIPVRHQVNRLSVNFTLTYTSSQFYQTTTVRKCRCNGQFLTTKAKMSVEGG-ILKKEPIRDSDKIETATNGKHNIKEIRD   88 (214)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (214)
                      .++.++++|+|++|++.+.+...+.+  +++.+++.+..   .-..-+++. +++.+..+....               .
T Consensus        48 ~~a~~~~~d~v~lS~~~~~~~~~~~~--~i~~l~~~g~~---~i~v~vGG~~~~~~~~~~~~~~---------------~  107 (137)
T 1ccw_A           48 KAAIETKADAILVSSLYGQGEIDCKG--LRQKCDEAGLE---GILLYVGGNIVVGKQHWPDVEK---------------R  107 (137)
T ss_dssp             HHHHHHTCSEEEEEECSSTHHHHHTT--HHHHHHHTTCT---TCEEEEEESCSSSSCCHHHHHH---------------H
T ss_pred             HHHHhcCCCEEEEEecCcCcHHHHHH--HHHHHHhcCCC---CCEEEEECCCcCchHhhhhhHH---------------H
Confidence            46788999999999999999998888  88899888732   111222332 333322110000               0


Q ss_pred             ceeeeEeEEEEEcCCHHHHHHHHHHhcCC
Q 028083           89 YGVVSVHHVGILCENLERSLEFYQNILGL  117 (214)
Q Consensus        89 ~~i~~i~HV~l~V~D~~~a~~FY~~~LGf  117 (214)
                      ..-.|++.+.-.-.+..+.++|..+.+|.
T Consensus       108 ~~~~G~d~~~~~g~~~~~~~~~l~~~~~~  136 (137)
T 1ccw_A          108 FKDMGYDRVYAPGTPPEVGIADLKKDLNI  136 (137)
T ss_dssp             HHHTTCSEECCTTCCHHHHHHHHHHHHTC
T ss_pred             HHHCCCCEEECCCCCHHHHHHHHHHHhCC
Confidence            11135565555667899999999888885

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=92.56  E-value=0.31  Score=35.02  Aligned_cols=52  Identities=12%  Similarity=0.218  Sum_probs=39.2

Q ss_pred             CcceEEEEEECCHHHHHHHHHhCCCeEEeec---------------CCceEEEEEcCCC-CeEEEEee
Q 028083          161 GRDRHTCIAIRDVSKLKMILDKAGISYTLSK---------------SGRPAIFTRDPDA-NALEFTQV  212 (214)
Q Consensus       161 ~g~~hiaf~V~dv~~~~~~l~~~G~~~~~~~---------------~g~~~~~~~DPdG-~~iEl~~~  212 (214)
                      .++.|+++.|+|++++.+.+++.|++.....               .+....++.-++| ..|||.+.
T Consensus        10 ~~i~hv~l~v~D~~~a~~FY~~lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~l~l~~~   77 (153)
T 1ss4_A           10 LRMDNVSIVVESLDNAISFFEEIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRF   77 (153)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEE
T ss_pred             cceeeEEEEeCCHHHHHHHHHHCCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCCCCcEEEEEEe
Confidence            3678999999999999998888899875321               2244566776777 78998864

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=92.51  E-value=0.57  Score=32.40  Aligned_cols=51  Identities=16%  Similarity=0.206  Sum_probs=37.1

Q ss_pred             cceEEEEEECCHHHHHHHHHh-CCCeEEee---cCCceEEEEEcCCCCeEEEEee
Q 028083          162 RDRHTCIAIRDVSKLKMILDK-AGISYTLS---KSGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       162 g~~hiaf~V~dv~~~~~~l~~-~G~~~~~~---~~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      ++.|+++.|+|++++.+.+++ .|++....   ..++....+...+|..+|+.+.
T Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   59 (134)
T 3rmu_A            5 RLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNTKMELLHP   59 (134)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEECSSSEEEEEEE
T ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEecCCEEEEEEec
Confidence            578999999999999999988 89987532   1222333344456788888764

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=92.44  E-value=0.43  Score=33.98  Aligned_cols=52  Identities=12%  Similarity=0.033  Sum_probs=40.1

Q ss_pred             CcceEEEEEECCHHHHHHHHH-hCCCeEEeec----CCceEEEEEcCCC-----CeEEEEee
Q 028083          161 GRDRHTCIAIRDVSKLKMILD-KAGISYTLSK----SGRPAIFTRDPDA-----NALEFTQV  212 (214)
Q Consensus       161 ~g~~hiaf~V~dv~~~~~~l~-~~G~~~~~~~----~g~~~~~~~DPdG-----~~iEl~~~  212 (214)
                      .++.|+++.|+|++++.+.++ ..|++.....    .+....++..+++     ..|+|.+.
T Consensus         8 ~~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~l~~~   69 (148)
T 1jc4_A            8 ICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAP   69 (148)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEE
T ss_pred             ceeeEEEEEeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCCCCcCcceEEEEeec
Confidence            468999999999999999987 4799876432    2345677777775     78999875

>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=92.40  E-value=1  Score=43.37  Aligned_cols=48  Identities=25%  Similarity=0.279  Sum_probs=35.6

Q ss_pred             eEEEEEECCHHHHHHHHHhCCCeEEeecCCceEEEEEcCCCCeEEEEe
Q 028083          164 RHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQ  211 (214)
Q Consensus       164 ~hiaf~V~dv~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdG~~iEl~~  211 (214)
                      ..+.|.+.|+.++.+.|.+..+...+..-....+|..||-||.|.|..
T Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dp~~~~~~~~~  172 (989)
T 3opy_A          125 GEVTFFTASIDKLKAKLIEIGAEIIPSKIDLVEFSTRDPMGDVISFSS  172 (989)
T ss_dssp             CEEEEECSCHHHHHHHHHHSSCCBCCCC--CCCEEEESSSEEEEECCS
T ss_pred             ceEEEEeCcHHHHHHHhhhcccccCCCCCCceeEEEecCCCCEEeeec
Confidence            468999999999999999873333222222456999999999998754

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=92.03  E-value=0.16  Score=37.68  Aligned_cols=62  Identities=15%  Similarity=0.189  Sum_probs=43.8

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCC-CCceEEEE---EECCeEEEEEecCCCCCCC
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDK-LPYRGAWL---WVGAEMIHLMELPNPDPLS  154 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~-~~~~~~~l---~~g~~~l~l~~~~~~~~~~  154 (214)
                      .++.|++|.|.|++++.+..++ .|.++....+... ...+.+|+   ..++..+++++........
T Consensus        78 ~g~~Hiaf~V~Did~~~~~l~~-~G~~~~~~~~~~~~~g~~~~f~~~~DPdG~~iEl~~~~~~~~~~  143 (161)
T 3oa4_A           78 EGIHHIAIGVKSIEERIQEVKE-NGVQMINDEPVPGARGAQVAFLHPRSARGVLYEFCEKKEQAENL  143 (161)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHH-TTCCBSCSSCEECGGGCEEEEBCGGGTTTCCEEEEECCCCCCC-
T ss_pred             CCeEEEEEEECCHHHHHHHHHH-CCCEecccCcccCCCCcEEEEEeccCCCeEEEEEEecCCcccce
Confidence            4899999999999999999998 8998865422211 12345666   3457789999877654443

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=91.71  E-value=0.69  Score=33.24  Aligned_cols=53  Identities=11%  Similarity=0.065  Sum_probs=38.6

Q ss_pred             CCcceEEEEEECCHHHHHHHHHh-CCCeEEeecCC-ceEEEEEcCCCCeEEEEee
Q 028083          160 GGRDRHTCIAIRDVSKLKMILDK-AGISYTLSKSG-RPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       160 g~g~~hiaf~V~dv~~~~~~l~~-~G~~~~~~~~g-~~~~~~~DPdG~~iEl~~~  212 (214)
                      -.++.|+++.|+|++++.+.+++ .|++......+ ...++..+..+..|+|.+.
T Consensus        26 i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~l~l~~~   80 (141)
T 3ghj_A           26 IKGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDSARRWNFLWVSGRAGMVVLQEE   80 (141)
T ss_dssp             CCCCCEEEEEESCHHHHHHHHHHTSCCEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred             eceecEEEEEeCCHHHHHHHHHHhcCCEEEEecCCCcEEEEEecCCCcEEEEecc
Confidence            35689999999999999999965 79998755433 3333334556788888764

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=91.04  E-value=0.57  Score=34.19  Aligned_cols=54  Identities=17%  Similarity=0.134  Sum_probs=37.5

Q ss_pred             CCCcceEEEEEECCHHHHHHHHHh-CCCeEEee------------------cCCceEEEEEcCCCCeEEEEeec
Q 028083          159 HGGRDRHTCIAIRDVSKLKMILDK-AGISYTLS------------------KSGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       159 ~g~g~~hiaf~V~dv~~~~~~l~~-~G~~~~~~------------------~~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      .-.++.|+++.|+|++++.+.+++ .|.+....                  ..+....++. -.|..|||.+..
T Consensus        16 ~~~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~g~~~leL~~~~   88 (159)
T 3gm5_A           16 DMRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFE-LGPLQLELIEPD   88 (159)
T ss_dssp             CGGGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEE-ETTEEEEEEEEC
T ss_pred             ccccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEe-cCCEEEEEEEEC
Confidence            445789999999999999999986 89875321                  0122334443 357789998753

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=90.78  E-value=0.79  Score=31.40  Aligned_cols=50  Identities=12%  Similarity=0.022  Sum_probs=37.0

Q ss_pred             cceEEEEEECCHHHHHHHHHh-CCCeEEee---c-CCceEEEEEcCCCCeEEEEee
Q 028083          162 RDRHTCIAIRDVSKLKMILDK-AGISYTLS---K-SGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       162 g~~hiaf~V~dv~~~~~~l~~-~G~~~~~~---~-~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      ++.|+++.|+|++++.+.+++ .|.++...   . .+...+++.-+++ .++|.+.
T Consensus         5 ~i~hi~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~-~l~l~~~   59 (126)
T 2p25_A            5 EIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQ-ELEIFIS   59 (126)
T ss_dssp             CCCCEEEEESCHHHHHHHHTTTTCCEEEEEEEEGGGTEEEEEEEETTE-EEEEEEC
T ss_pred             ccceEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCcceEEEEecCCe-EEEEEec
Confidence            578999999999999999976 89987542   1 2334455665666 8888763

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=90.30  E-value=0.83  Score=32.25  Aligned_cols=50  Identities=8%  Similarity=-0.039  Sum_probs=36.4

Q ss_pred             cceEEEEEECCHHHHHHHHHh-CCCeEEeecC-C--ceEEEEEcCCCCeEEEEee
Q 028083          162 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKS-G--RPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       162 g~~hiaf~V~dv~~~~~~l~~-~G~~~~~~~~-g--~~~~~~~DPdG~~iEl~~~  212 (214)
                      ++.|+++.|+|++++.+.+++ .|+++..... +  .....+.. +|..|+|.+.
T Consensus         5 ~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~   58 (136)
T 2rk0_A            5 GVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLP-GGLSIVLREH   58 (136)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSSEEEEEEECT-TSCEEEEEEE
T ss_pred             cccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCceEEEEEc-CCCEEEEEeC
Confidence            578999999999999998876 7998764322 1  23333344 7888999875

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=90.09  E-value=0.78  Score=37.84  Aligned_cols=36  Identities=14%  Similarity=0.134  Sum_probs=31.9

Q ss_pred             CcceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeee
Q 028083           87 RDYGVVSVHHVGILCENLERSLEFYQNILGLEINEA  122 (214)
Q Consensus        87 ~~~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~  122 (214)
                      .+....+|.+|.+.+.|++++++.|+++||.+....
T Consensus       184 HpnGa~gI~~vvi~~~dp~~~~~~~~~l~g~~~~~~  219 (274)
T 3p8a_A          184 YFQKQFSIETVIVKSKNRSQTVSNWLKWFDMDIVEE  219 (274)
T ss_dssp             TCCTTEEEEEEEEEETTHHHHHHHHHHHHCCEEEEE
T ss_pred             CCCccceEEEEEEEeCCHHHHHHHHHHHhCCCcccc
Confidence            345568999999999999999999999999998754

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=89.92  E-value=0.59  Score=33.23  Aligned_cols=50  Identities=14%  Similarity=0.136  Sum_probs=36.5

Q ss_pred             cceEEEEEECCHHHHHHHHHhCCCeEEeecCCceEEEEEcCCCCeEEEEe
Q 028083          162 RDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQ  211 (214)
Q Consensus       162 g~~hiaf~V~dv~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdG~~iEl~~  211 (214)
                      ++.|+.+.|+|++++.+.+++.|+++...........+.-++|..++|.+
T Consensus         4 ~l~hv~l~v~D~~~a~~FY~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~   53 (138)
T 2a4x_A            4 RISLFAVVVEDMAKSLEFYRKLGVEIPAEADSAPHTEAVLDGGIRLAWDT   53 (138)
T ss_dssp             EEEEEEEEESCHHHHHHHHHTTTCCCCGGGGGCSEEEEECTTSCEEEEEE
T ss_pred             eeeEEEEEECCHHHHHHHHHHcCCcEEecCCCCceEEEEcCCCeEEEEec
Confidence            57899999999999999998889887543222223444446778888875

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=89.74  E-value=0.86  Score=31.43  Aligned_cols=53  Identities=21%  Similarity=0.307  Sum_probs=35.0

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEE-CCeEEEEE
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLM  145 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~-g~~~l~l~  145 (214)
                      .++.|+.|.|.|++++.+..++ .|.++...........+.+|+.- ++..++++
T Consensus        80 ~g~~~~~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~  133 (134)
T 3l7t_A           80 CGLRHLAFYVEDVEASRQELIA-LGIRVEEVRYDDYTGKKMAFFFDPDGLPLELH  133 (134)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHH-HTCCCCCCEECTTSCCEEEEEECTTCCEEEEE
T ss_pred             CCeEEEEEEECCHHHHHHHHHh-CCCcccceeccCCCceEEEEEECCCCCEEEEe
Confidence            5899999999999999999998 89887643211122223444432 44556554

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=89.48  E-value=1.3  Score=31.81  Aligned_cols=48  Identities=21%  Similarity=0.215  Sum_probs=34.5

Q ss_pred             CcceEEEEEECCHHHHHHHHHh-CCCeEEeecCCceEEEEEcCCCCeEEEEe
Q 028083          161 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQ  211 (214)
Q Consensus       161 ~g~~hiaf~V~dv~~~~~~l~~-~G~~~~~~~~g~~~~~~~DPdG~~iEl~~  211 (214)
                      .++.|+++.|.|++++.+.+++ .|+++.....+.  .++.- +|..++|.+
T Consensus        22 ~~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~~~~~--~~l~~-~~~~l~l~~   70 (152)
T 3huh_A           22 DRIDHLVLTVSDISTTIRFYEEVLGFSAVTFKQNR--KALIF-GAQKINLHQ   70 (152)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEETTTE--EEEEE-TTEEEEEEE
T ss_pred             ceeeEEEEEeCCHHHHHHHHHhcCCCEEEEccCCe--EEEEe-CCeEEEEec
Confidence            3678999999999999999998 899987654332  22222 345666665

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=88.42  E-value=2.8  Score=28.93  Aligned_cols=58  Identities=16%  Similarity=0.135  Sum_probs=38.3

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeee-cCCCCCCceEEEEE-ECCeEEEEEecCCC
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEA-RPHDKLPYRGAWLW-VGAEMIHLMELPNP  150 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~-~~~~~~~~~~~~l~-~g~~~l~l~~~~~~  150 (214)
                      .++.|+.|.|.|++++.+..++ .|.++... ........+.+|+. ..+..+++++....
T Consensus        70 ~~~~~~~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~~  129 (135)
T 1f9z_A           70 TAYGHIALSVDNAAEACEKIRQ-NGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDA  129 (135)
T ss_dssp             SSEEEEEEECSCHHHHHHHHHH-TTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC---
T ss_pred             CCccEEEEEeCCHHHHHHHHHH-CCCEEecCCccCCCCceeEEEEECCCCCEEEEEecCCC
Confidence            3788999999999999999988 89988743 22222222334443 35678888876543

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=88.36  E-value=0.63  Score=32.95  Aligned_cols=50  Identities=10%  Similarity=0.076  Sum_probs=34.6

Q ss_pred             cceEEEEEECCHHHHHHHHHhCCCeEEeecCC-ceEEEEEcCCCCeEEEEe
Q 028083          162 RDRHTCIAIRDVSKLKMILDKAGISYTLSKSG-RPAIFTRDPDANALEFTQ  211 (214)
Q Consensus       162 g~~hiaf~V~dv~~~~~~l~~~G~~~~~~~~g-~~~~~~~DPdG~~iEl~~  211 (214)
                      .+.|+++.|+|++++.+-.++.|+++.....+ +...++...+|..++|..
T Consensus         6 ~i~hv~l~v~D~~~a~~FY~~LG~~~~~~~~~~~~~~~~~~~~~~~l~l~~   56 (128)
T 3g12_A            6 LITSITINTSHLQGMLGFYRIIGFQFTASKVDKGSEVHRAVHNGVEFSLYS   56 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHTCCCEEC-----CCEEEEEETTEEEEEEE
T ss_pred             eEEEEEEEcCCHHHHHHHHHHCCCEEecccCCCCCEEEEEeCCCeEEEEEE
Confidence            57899999999999999888889887654222 234445434666777754

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=88.07  E-value=1.8  Score=29.89  Aligned_cols=48  Identities=17%  Similarity=0.247  Sum_probs=34.0

Q ss_pred             CcceEEEEEECCHHHHHHHHHh-CCCeEEeecCCceEEEEEcCCCCeEEEEe
Q 028083          161 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQ  211 (214)
Q Consensus       161 ~g~~hiaf~V~dv~~~~~~l~~-~G~~~~~~~~g~~~~~~~DPdG~~iEl~~  211 (214)
                      .++.|+++.|+|++++.+.+++ .|.++.....+.  .++.- +|..+++.+
T Consensus         9 ~~i~hi~l~v~D~~~a~~FY~~~lG~~~~~~~~~~--~~~~~-~~~~~~l~~   57 (133)
T 3ey7_A            9 SHLDHLVLTVADIPTTTNFYEKVLGMKAVSFGAGR--IALEF-GHQKINLHQ   57 (133)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHHHCCEEEEETTTE--EEEEE-TTEEEEEEE
T ss_pred             cccCEEEEEECCHHHHHHHHHHccCceEEEecCCe--EEEEc-CCEEEEEEc
Confidence            4689999999999999999987 799987554332  22222 355666654

>2xij_A Methylmalonyl-COA mutase, mitochondrial; isomerase, organic aciduria, vitamin B12; HET: B12 5AD BTB; 1.95A {Homo sapiens} PDB: 2xiq_A* 3bic_A

Probab=87.64  E-value=0.082  Score=49.71  Aligned_cols=82  Identities=11%  Similarity=0.045  Sum_probs=60.2

Q ss_pred             cccccccccEEeeeeccccccccccccceeeccccccceeeeceeeeeeceeeecCccCccchhhhccCCCCccccCCcc
Q 028083           10 AIPVRHQVNRLSVNFTLTYTSSQFYQTTTVRKCRCNGQFLTTKAKMSVEGGILKKEPIRDSDKIETATNGKHNIKEIRDY   89 (214)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (214)
                      .+++++|+|+|+||++.+.|..++.+  +++.++..|    +.....+.|++++.+...                   ..
T Consensus       649 ~aA~e~~adiVglSsl~~~~~~~~~~--vi~~Lr~~G----~~dv~VivGG~~P~~d~~-------------------~l  703 (762)
T 2xij_A          649 QQAVDADVHAVGVSTLAAGHKTLVPE--LIKELNSLG----RPDILVMCGGVIPPQDYE-------------------FL  703 (762)
T ss_dssp             HHHHHTTCSEEEEEECSSCHHHHHHH--HHHHHHHTT----CTTSEEEEEESCCGGGHH-------------------HH
T ss_pred             HHHHHcCCCEEEEeeecHHHHHHHHH--HHHHHHhcC----CCCCEEEEeCCCCcccHH-------------------HH
Confidence            56789999999999999999999988  899999999    444555566544432111                   01


Q ss_pred             eeeeEeEEEEEcCCHHHHHHHHHHhcC
Q 028083           90 GVVSVHHVGILCENLERSLEFYQNILG  116 (214)
Q Consensus        90 ~i~~i~HV~l~V~D~~~a~~FY~~~LG  116 (214)
                      .-.|.|.+.-.-.|+.+++++-.+.+.
T Consensus       704 ~~~GaD~~f~pgtd~~e~~~~i~~~l~  730 (762)
T 2xij_A          704 FEVGVSNVFGPGTRIPKAAVQVLDDIE  730 (762)
T ss_dssp             HHHTCCEEECTTCCHHHHHHHHHHHHH
T ss_pred             HhCCCCEEeCCCCCHHHHHHHHHHHHH
Confidence            114667666666799999999888764

>1req_A Methylmalonyl-COA mutase; isomerase, intramolecular transferase; HET: B12 DCA; 2.00A {Propionibacterium freudenreichii subspshermanii} SCOP: c.1.19.1 c.23.6.1 PDB: 2req_A* 3req_A* 4req_A* 6req_A* 7req_A* 5req_A* 1e1c_A*

Probab=87.63  E-value=0.1  Score=48.78  Aligned_cols=81  Identities=10%  Similarity=-0.002  Sum_probs=58.5

Q ss_pred             cccccccccEEeeeeccccccccccccceeeccccccceeeeceeeeeeceeeecCccCccchhhhccCCCCccccCCcc
Q 028083           10 AIPVRHQVNRLSVNFTLTYTSSQFYQTTTVRKCRCNGQFLTTKAKMSVEGGILKKEPIRDSDKIETATNGKHNIKEIRDY   89 (214)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (214)
                      .+++++|+|+|+||++.+.|..+..+  +++.++..|    +.....+.+++++.+...                   ..
T Consensus       641 ~aA~e~~adiVglSsl~~~~~~~~~~--vi~~L~~~G----~~~i~VivGG~~p~~d~~-------------------~l  695 (727)
T 1req_A          641 RQAVEADVHVVGVSSLAGGHLTLVPA--LRKELDKLG----RPDILITVGGVIPEQDFD-------------------EL  695 (727)
T ss_dssp             HHHHHTTCSEEEEEECSSCHHHHHHH--HHHHHHHTT----CTTSEEEEEESCCGGGHH-------------------HH
T ss_pred             HHHHHcCCCEEEEeeecHhHHHHHHH--HHHHHHhcC----CCCCEEEEcCCCccccHH-------------------HH
Confidence            56789999999999999999999888  899999999    434555556544432111                   01


Q ss_pred             eeeeEeEEEEEcCCHHHHHHHHHHhc
Q 028083           90 GVVSVHHVGILCENLERSLEFYQNIL  115 (214)
Q Consensus        90 ~i~~i~HV~l~V~D~~~a~~FY~~~L  115 (214)
                      .-.|.|.+.-.-.++.+.+.++.+.+
T Consensus       696 ~~~GaD~~f~~gt~~~e~a~~l~~~l  721 (727)
T 1req_A          696 RKDGAVEIYTPGTVIPESAISLVKKL  721 (727)
T ss_dssp             HHTTEEEEECTTCCHHHHHHHHHHHH
T ss_pred             HhCCCCEEEcCCccHHHHHHHHHHHH
Confidence            11567777777788888888887654

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=87.57  E-value=1.4  Score=32.92  Aligned_cols=55  Identities=15%  Similarity=0.212  Sum_probs=39.1

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEE-ECCeEEEEEecC
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLW-VGAEMIHLMELP  148 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~-~g~~~l~l~~~~  148 (214)
                      .++.|+.|.|.|++++.+-.++ .|.++.... ........+|+. .++..++|++..
T Consensus       126 ~g~~hl~f~v~dv~~~~~~l~~-~G~~~~~~~-~~~~~~~~~~~~DPdG~~iel~~~~  181 (187)
T 3vw9_A          126 RGFGHIGIAVPDVYSACKRFEE-LGVKFVKKP-DDGKMKGLAFIQDPDGYWIEILNPN  181 (187)
T ss_dssp             CBEEEEEEECSCHHHHHHHHHH-TTCCEEECT-TSSSSTTCEEEECTTCCEEEEECGG
T ss_pred             CceeEEEEEECCHHHHHHHHHH-CCCeEeeCC-ccCCcceEEEEECCCCCEEEEEEcc
Confidence            5899999999999999999998 899887642 222111234444 356788888754

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=87.47  E-value=2.7  Score=29.79  Aligned_cols=52  Identities=19%  Similarity=0.181  Sum_probs=38.0

Q ss_pred             CcceEEEEEECCHHHHHHHHHh-CCCeEEeec---CC-ceEEEEEcCC---CCeEEEEee
Q 028083          161 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSK---SG-RPAIFTRDPD---ANALEFTQV  212 (214)
Q Consensus       161 ~g~~hiaf~V~dv~~~~~~l~~-~G~~~~~~~---~g-~~~~~~~DPd---G~~iEl~~~  212 (214)
                      .++.|+.+.|+|++++.+.+++ .|++.....   .+ ....++.-++   +..|+|.+.
T Consensus         7 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~   66 (144)
T 2c21_A            7 RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYN   66 (144)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEE
T ss_pred             ceeEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcCCCCCceEEEEEec
Confidence            3678999999999999999975 799876432   22 2335565554   588999875

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=86.22  E-value=2.8  Score=30.13  Aligned_cols=49  Identities=18%  Similarity=0.152  Sum_probs=36.3

Q ss_pred             CcceEEEEEECCHHHHHHHH----HhCCCeEEeecCCceEEEEEcCCCCeEEEEee
Q 028083          161 GRDRHTCIAIRDVSKLKMIL----DKAGISYTLSKSGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       161 ~g~~hiaf~V~dv~~~~~~l----~~~G~~~~~~~~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      .++.|+++.|+|++++.+.+    ...|++......++. .|+.  +|..|+|.+.
T Consensus        19 ~~i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~~~~~-~~~~--g~~~l~l~~~   71 (146)
T 3ct8_A           19 GMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWSRGK-SYKH--GKTYLVFVQT   71 (146)
T ss_dssp             TSCCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEETTEE-EEEE--TTEEEEEEEC
T ss_pred             cceeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEecCCCc-eEec--CCeEEEEEEc
Confidence            47899999999999999888    568999865433332 3444  5678888764

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=85.28  E-value=2.5  Score=31.48  Aligned_cols=55  Identities=16%  Similarity=0.263  Sum_probs=37.9

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEE-ECCeEEEEEecC
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLW-VGAEMIHLMELP  148 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~-~g~~~l~l~~~~  148 (214)
                      .++.|+.|.|.|++++.+..++ .|.++... +......+.+|+. ..+..+++++..
T Consensus       123 ~g~~hi~f~v~dvd~~~~~l~~-~G~~~~~~-p~~~~~~~~~~~~DPdG~~iel~~~~  178 (184)
T 2za0_A          123 RGFGHIGIAVPDVYSACKRFEE-LGVKFVKK-PDDGKMKGLAFIQDPDGYWIEILNPN  178 (184)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHH-TTCCEEEC-TTSSSSTTCEEEECTTCCEEEEECTT
T ss_pred             CCeeEEEEEeCCHHHHHHHHHH-CCCeeecC-CcCCCceeEEEEECCCCCEEEEEecC
Confidence            4788999999999999999998 89988753 2222112234444 356678887643

>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}

Probab=84.75  E-value=0.094  Score=39.79  Aligned_cols=35  Identities=17%  Similarity=0.126  Sum_probs=31.3

Q ss_pred             cccccccccEEeeeeccccccccccccceeecccccc
Q 028083           10 AIPVRHQVNRLSVNFTLTYTSSQFYQTTTVRKCRCNG   46 (214)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   46 (214)
                      .++.++++|+|+||++++.|...+.+  +++.+|..+
T Consensus        63 ~aa~~~~~diV~lS~~~~~~~~~~~~--~i~~L~~~g   97 (161)
T 2yxb_A           63 MAAVQEDVDVIGVSILNGAHLHLMKR--LMAKLRELG   97 (161)
T ss_dssp             HHHHHTTCSEEEEEESSSCHHHHHHH--HHHHHHHTT
T ss_pred             HHHHhcCCCEEEEEeechhhHHHHHH--HHHHHHhcC
Confidence            45778999999999999999999888  899998877

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=84.58  E-value=4.1  Score=27.89  Aligned_cols=54  Identities=9%  Similarity=0.234  Sum_probs=35.3

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEE-CCeEEEEEe
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLME  146 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~-g~~~l~l~~  146 (214)
                      .+..|+.|.|.|++++.+...+ .|.++...........+.+++.- .+..+++++
T Consensus        78 ~~~~~~~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~g~~~~~~~DP~G~~~el~e  132 (133)
T 4hc5_A           78 GGYTGISLITRDIDEAYKTLTE-RGVTFTKPPEMMPWGQRATWFSDPDGNQFFLVE  132 (133)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHH-TTCEESSSCEECTTSCEEEEEECTTCEEEEEEE
T ss_pred             CCeEEEEEEeCCHHHHHHHHHH-CCCEeecCCCcCCCCCEEEEEECCCCCEEEEEe
Confidence            5789999999999999999998 79988742111111213344432 455666653

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=84.43  E-value=3.1  Score=29.77  Aligned_cols=31  Identities=19%  Similarity=0.337  Sum_probs=26.7

Q ss_pred             CcceEEEEEECCHHHHHHHHHh-CCCeEEeec
Q 028083          161 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSK  191 (214)
Q Consensus       161 ~g~~hiaf~V~dv~~~~~~l~~-~G~~~~~~~  191 (214)
                      .++.|+++.|+|++++.+.+++ .|.++....
T Consensus        26 ~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~   57 (147)
T 3zw5_A           26 RRLDHIVMTVKSIKDTTMFYSKILGMEVMTFK   57 (147)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHHHCCEEEEET
T ss_pred             ccccEEEEEeCCHHHHHHHHHHhcCCEEEecC
Confidence            4788999999999999999987 799987543

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=83.12  E-value=2.7  Score=29.35  Aligned_cols=49  Identities=2%  Similarity=-0.114  Sum_probs=35.5

Q ss_pred             CcceEEEEEECCHHHHHHHHHh-CCCeEEeecCCceEEEEEcCCCCeEEEEe
Q 028083          161 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQ  211 (214)
Q Consensus       161 ~g~~hiaf~V~dv~~~~~~l~~-~G~~~~~~~~g~~~~~~~DPdG~~iEl~~  211 (214)
                      .++.|+.+.|.|++++.+-+++ .|.+......  ....+...+|..++|.+
T Consensus        12 ~~i~~v~l~v~D~~~s~~FY~~~lG~~~~~~~~--~~~~~~~~~~~~l~l~~   61 (132)
T 3sk2_A           12 ITPNLQLVYVSNVERSTDFYRFIFKKEPVFVTP--RYVAFPSSGDALFAIWS   61 (132)
T ss_dssp             CCCCEEEEECSCHHHHHHHHHHHHTCCCSEECS--SEEEEECSTTCEEEEES
T ss_pred             ceeeEEEEEECCHHHHHHHHHHHcCCeEEEcCC--CEEEEEcCCCcEEEEEe
Confidence            4689999999999999998876 7887654322  23345556677777765

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=82.71  E-value=2.9  Score=29.43  Aligned_cols=50  Identities=14%  Similarity=0.107  Sum_probs=33.9

Q ss_pred             cceEEEEEECCHHHHHHHHHh-CCCeEEeecCCce-----EEEEEcCCCCeEEEEee
Q 028083          162 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRP-----AIFTRDPDANALEFTQV  212 (214)
Q Consensus       162 g~~hiaf~V~dv~~~~~~l~~-~G~~~~~~~~g~~-----~~~~~DPdG~~iEl~~~  212 (214)
                      ++.|+.+.|+|++++.+.+++ .|++......+..     ..++. .+|..|++.+.
T Consensus         4 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~-~g~~~l~l~~~   59 (139)
T 1r9c_A            4 GLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFL-IGDIWVAIMQG   59 (139)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEE-ETTEEEEEEEC
T ss_pred             eEEEEEEEeCCHHHHHHHHHHhhCCEEeecCCCccccccceEEEE-ECCEEEEEEeC
Confidence            578999999999999998875 7998764322111     11232 25667877653

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=82.31  E-value=6  Score=27.55  Aligned_cols=47  Identities=11%  Similarity=0.071  Sum_probs=32.8

Q ss_pred             cceEEEEEECCHHHHHHHHHh-CCCeEEeecCCceEEEEEcCCCCeEEEEe
Q 028083          162 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQ  211 (214)
Q Consensus       162 g~~hiaf~V~dv~~~~~~l~~-~G~~~~~~~~g~~~~~~~DPdG~~iEl~~  211 (214)
                      ++.|+.+.|+|++++.+-+++ .|+++.....+.  .++.. +|..+++.+
T Consensus         4 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~--~~~~~-~~~~l~l~~   51 (135)
T 1nki_A            4 GLNHLTLAVADLPASIAFYRDLLGFRLEARWDQG--AYLEL-GSLWLCLSR   51 (135)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEETTE--EEEEE-TTEEEEEEE
T ss_pred             eEeEEEEEeCCHHHHHHHHHHhcCCEEEEcCCCc--eEEec-CCEEEEEEe
Confidence            578999999999999999987 899886542222  23332 344566654

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=81.69  E-value=3.9  Score=29.24  Aligned_cols=48  Identities=15%  Similarity=0.094  Sum_probs=35.3

Q ss_pred             cceEEEEEECCHHHHHHHHHh-CCCeEEeecCCceEEEEEcCCCCeEEEEee
Q 028083          162 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       162 g~~hiaf~V~dv~~~~~~l~~-~G~~~~~~~~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      ++.|+.+.|+|++++.+.+++ .|+++.... + ...++.. +|..|+|.+.
T Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~-~-~~~~~~~-~~~~l~l~~~   53 (150)
T 3bqx_A            5 QVAVITLGIGDLEASARFYGEGFGWAPVFRN-P-EIIFYQM-NGFVLATWLV   53 (150)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHTSCCCCSEEC-S-SEEEEEC-SSSEEEEEEH
T ss_pred             ceEEEEEEcCCHHHHHHHHHHhcCCEeecCC-C-CEEEEEc-CCEEEEEEec
Confidence            578999999999999999986 798875433 2 2344443 6778888763

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=81.43  E-value=2.8  Score=30.09  Aligned_cols=49  Identities=8%  Similarity=-0.014  Sum_probs=35.4

Q ss_pred             cceEEEEEECCHHHHHHHHHh-CCCeEEeecCCceEEEEEcCCCCeEEEEee
Q 028083          162 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       162 g~~hiaf~V~dv~~~~~~l~~-~G~~~~~~~~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      ++.|+.+.|+|++++.+.+++ .|+++.....+  ..++.-++|..|+|.+.
T Consensus        25 ~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~--~~~~~~~~~~~l~l~~~   74 (144)
T 2kjz_A           25 HPDFTILYVDNPPASTQFYKALLGVDPVESSPT--FSLFVLANGMKLGLWSR   74 (144)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHTCCCSEEETT--EEEEECTTSCEEEEEET
T ss_pred             ceeEEEEEeCCHHHHHHHHHHccCCEeccCCCC--eEEEEcCCCcEEEEEeC
Confidence            678999999999999998876 69886543222  33445455778888653

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=81.09  E-value=6.1  Score=27.76  Aligned_cols=48  Identities=10%  Similarity=0.069  Sum_probs=33.9

Q ss_pred             cceEEEEEECCHHHHHHHHHh-CCCeEEeecCCceEEEEEcCCCCeEEEEee
Q 028083          162 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       162 g~~hiaf~V~dv~~~~~~l~~-~G~~~~~~~~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      ++.|+++.|+|++++.+-+++ .|+++.....+.  .++.. +|..++|.+.
T Consensus         4 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~--~~~~~-~~~~l~l~~~   52 (141)
T 1npb_A            4 SLNHLTLAVSDLQKSVTFWHELLGLTLHARWNTG--AYLTC-GDLWVCLSYD   52 (141)
T ss_dssp             EEEEEEEEESCHHHHHHHHHTTSCCEEEEEETTE--EEEEE-TTEEEEEEEC
T ss_pred             eEEEEEEEeCCHHHHHHHHHhccCCEEEeecCCc--EEEEE-CCEEEEEEEC
Confidence            578999999999999999986 799886543222  33332 4556666653

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=80.90  E-value=3.3  Score=29.96  Aligned_cols=48  Identities=6%  Similarity=-0.077  Sum_probs=35.0

Q ss_pred             cceEEEEEECCHHHHHHHHHh-CCCeEEeecCCceEEEEEcCCCCeEEEEe
Q 028083          162 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQ  211 (214)
Q Consensus       162 g~~hiaf~V~dv~~~~~~l~~-~G~~~~~~~~g~~~~~~~DPdG~~iEl~~  211 (214)
                      ++.|+.+.|+|++++.+-+++ .|.++.....  ...++.-++|..+++.+
T Consensus         6 ~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~--~~~~~~~~~g~~l~l~~   54 (148)
T 3rhe_A            6 DPNLVLFYVKNPAKSEEFYKNLLDTQPIESSP--TFAMFVMKTGLRLGLWA   54 (148)
T ss_dssp             -CEEEEEEESCHHHHHHHHHHHHTCCCSEECS--SEEEEECTTSCEEEEEE
T ss_pred             cccEEEEEeCCHHHHHHHHHHHcCCEEeccCC--CEEEEEcCCCcEEEEec
Confidence            578999999999999998876 7988754432  23445555777887765

>1k4n_A Protein EC4020, protein YECM; structural genomics, A NEW fold of protein, PSI, protein structure initiative; 1.60A {Escherichia coli} SCOP: d.32.1.5

Probab=80.62  E-value=18  Score=28.03  Aligned_cols=93  Identities=14%  Similarity=0.127  Sum_probs=59.4

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEe-eecCCCCCCceEEE-----EEECCeEEEEEecCCCCCCCCCCCCCCcceE
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEIN-EARPHDKLPYRGAW-----LWVGAEMIHLMELPNPDPLSGRPEHGGRDRH  165 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~-~~~~~~~~~~~~~~-----l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~h  165 (214)
                      ..+|||.++|.+.+.+-+|-+..+-.--. ....- .++--..|     +..++..+..++.+.|.. ...  ...|.-|
T Consensus        42 ~~~DHIalRvn~~~~Ae~~~~~l~~~G~llSen~I-NGRPI~l~~L~qPL~~~~~~I~cvELP~P~~-K~Y--p~eGWEH  117 (192)
T 1k4n_A           42 LTADHISLRCHQNATAERWRRGFEQCGELLSENMI-NGRPICLFKLHEPVQVAHWQFSIVELPWPGE-KRY--PHEGWEH  117 (192)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHTTTEEEEEEEEE-TTEEEEEEEEEEEEEETTEEEEEEEEECCCS-SCC--SSCEEEE
T ss_pred             ccCcEEEEecCCHHHHHHHHHHHHHhchhhhcccc-CCeeEEEEEcCCCceeCCeEEEEEEcCCCCC-CCC--CCCCceE
Confidence            47999999999999999999997765322 11111 12212222     456788888888876652 111  2378899


Q ss_pred             EEEEEC----CHHHHHHH------HHhCCCeEE
Q 028083          166 TCIAIR----DVSKLKMI------LDKAGISYT  188 (214)
Q Consensus       166 iaf~V~----dv~~~~~~------l~~~G~~~~  188 (214)
                      |-|-++    ++++..++      +...|+++.
T Consensus       118 IE~Vlp~~~~t~~~~~~~l~~~~~~~~~gikvK  150 (192)
T 1k4n_A          118 IEIVLPGDPETLNARALALLSDEGLSLPGISVK  150 (192)
T ss_dssp             EEEECCSCGGGHHHHHHHTSCHHHHHSTTCEEE
T ss_pred             EEEEecCCcCCHHHHHHHHhhcccccCCCcEEE
Confidence            999998    33443333      334578874

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=80.56  E-value=2.4  Score=30.69  Aligned_cols=54  Identities=15%  Similarity=0.249  Sum_probs=36.7

Q ss_pred             eEeEEEEEcCCHHHHHHHHHHhcCCEEeee-cCCCCCCceEEEEE-ECCeEEEEEecCC
Q 028083           93 SVHHVGILCENLERSLEFYQNILGLEINEA-RPHDKLPYRGAWLW-VGAEMIHLMELPN  149 (214)
Q Consensus        93 ~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~-~~~~~~~~~~~~l~-~g~~~l~l~~~~~  149 (214)
                      ++.|+.|.|.|++++.+-.++ .|.++... ......  +.+|++ ..+..++|++...
T Consensus        98 g~~~l~f~VdDvda~~~~l~~-~Gv~~~~~p~~~~~g--~~~~f~DPdGn~iel~q~~~  153 (155)
T 4g6x_A           98 GIPAASFAVDDIAAEYERLSA-LGVRFTQEPTDMGPV--VTAILDDTCGNLIQLMQIAY  153 (155)
T ss_dssp             TCCSEEEEESCHHHHHHHHHH-TTCCEEEEEEECSSC--EEEEEECSSSCEEEEEEC--
T ss_pred             CceEEEeeechhhhhhhHHhc-CCcEEeeCCEEcCCe--EEEEEECCCCCEEEEEEECC
Confidence            578999999999999999998 89887643 222222  344443 3566788887643

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=80.46  E-value=6.1  Score=28.69  Aligned_cols=49  Identities=14%  Similarity=0.203  Sum_probs=34.1

Q ss_pred             CcceEEEEEECCHHHHHHHHHh-CCCeEEeecCCceEEEEEcCCCCeEEEEe
Q 028083          161 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQ  211 (214)
Q Consensus       161 ~g~~hiaf~V~dv~~~~~~l~~-~G~~~~~~~~g~~~~~~~DPdG~~iEl~~  211 (214)
                      .++.|+++.|+|++++.+-+++ .|.++.....+. ..++.. +|..+++.+
T Consensus         7 ~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~-~~~~~~-g~~~~~l~~   56 (160)
T 3r4q_A            7 SAIMETALYADDLDAAEAFYRDVFGLEMVLKLPGQ-LVFFKC-GRQMLLLFD   56 (160)
T ss_dssp             SCEEEEEEECSCHHHHHHHHHHHSCCEEEEEETTT-EEEEEE-TTEEEEEEC
T ss_pred             ccccEEEEEeCCHHHHHHHHHHhcCCEEEEecCCc-EEEEeC-CCEEEEEEe
Confidence            4689999999999999999987 899987543332 233333 344555543

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=80.12  E-value=3.7  Score=28.42  Aligned_cols=50  Identities=12%  Similarity=0.080  Sum_probs=32.0

Q ss_pred             cceEEEEEECCHHHHHHHHHh-CCCeEEeecCCce-----EEEEEcCCCCeEEEEee
Q 028083          162 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRP-----AIFTRDPDANALEFTQV  212 (214)
Q Consensus       162 g~~hiaf~V~dv~~~~~~l~~-~G~~~~~~~~g~~-----~~~~~DPdG~~iEl~~~  212 (214)
                      ++.|+.+.|+|++++.+.+++ .|++......+..     ..++.- +|..+++.+.
T Consensus         4 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~   59 (133)
T 2p7o_A            4 GLSHITLIVKDLNKTTAFLQNIFNAEEIYSSGDKTFSLSKEKFFLI-AGLWICIMEG   59 (133)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHHCCEECC-----CCCSSCEEEEEE-TTEEEEEEEC
T ss_pred             eEEEEEEEcCCHHHHHHHHHHhcCCEEeeecCCcccccCCceEEEe-CCEEEEEecC
Confidence            578999999999999998876 7998754322111     012322 4667777653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	214
d1zswa1	144	d.32.1.10 (A:1-144) Hypothetical protein BC1024 {B	4e-15
d2c21a1	139	d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathion	3e-14
d1f9za_	135	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	8e-13
d1r9ca_	130	d.32.1.2 (A:) Fosfomycin resistance protein FosX {	2e-12
d1nkia_	134	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	2e-11
d1qipa_	176	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	7e-11
d1npba_	140	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	1e-10
d1mpya2	162	d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (met	2e-10
d1zswa2	170	d.32.1.10 (A:145-314) Hypothetical protein BC1024	5e-10
d1f1ua2	176	d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxy	6e-10
d1xrka_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	2e-09
d1xqaa_	113	d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillu	1e-08
d2i7ra1	115	d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Str	2e-08
d1jc4a_	145	d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propion	3e-08
d1mpya1	145	d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metap	5e-08
d1ss4a_	149	d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillu	6e-08
d1twua_	137	d.32.1.8 (A:) Hypothetical protein YycE {Bacillus	7e-08
d1klla_	128	d.32.1.2 (A:) Mitomycin resistance protein D, MRD	1e-07
d1lgta1	131	d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygena	2e-07
d1sqia1	149	d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxyge	4e-07
d1f1ua1	146	d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxyge	8e-07
d1sp8a2	224	d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxy	2e-06
d1t47a1	163	d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxyg	4e-06
d1kw3b2	156	d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxyge	4e-06
d1kw3b1	132	d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygena	1e-05
d2pjsa1	111	d.32.1.2 (A:3-113) Uncharacterized protein Atu1953	2e-05
d1sp8a1	172	d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxyg	3e-05
d1jifa_	122	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	3e-05
d1ecsa_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {K	7e-05
d1sqda1	167	d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxyg	6e-04

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 144

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 67.3 bits (163), Expect = 4e-15
 Identities = 23/133 (17%), Positives = 46/133 (34%), Gaps = 7/133 (5%)

Query: 89  YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV---GAEMIHLM 145
           Y +   HH+ ++ +N   +  FY+N+LGL   +   +   P      +    G+    L 
Sbjct: 2   YEIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELS 61

Query: 146 ELPNPDPLSGRPEHGGRDR--HTCIAIRDVSKLKMILDKAGISYT--LSKSGRPAIFTRD 201
               P             R      +   +   K   +K  + ++   + + RPA+   D
Sbjct: 62  FFEIPLVGRTYRGTNAITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANRPALQFED 121

Query: 202 PDANALEFTQVDG 214
            +   L     +G
Sbjct: 122 AEGLRLVLLVSNG 134

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]} Length = 139

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

 Score = 65.1 bits (157), Expect = 3e-14
 Identities = 26/118 (22%), Positives = 44/118 (37%)

Query: 94  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 153
           + H  I   +L+RS++FY   LG+++       +  Y   +L  G EM   +     +  
Sbjct: 4   MLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYG 63

Query: 154 SGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQ 211
               +H     H  I + DV +L   + K  +            F  DPD   +E   
Sbjct: 64  VTSYKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDESGFMAFVVDPDGYYIELLN 121

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

 Score = 61.2 bits (147), Expect = 8e-13
 Identities = 22/122 (18%), Positives = 49/122 (40%), Gaps = 5/122 (4%)

Query: 95  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS 154
            H  +   +L+RS++FY  +LG+++     + +  Y  A++  G E    +     +   
Sbjct: 4   LHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGV 63

Query: 155 GRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-----AIFTRDPDANALEF 209
            + E G    H  +++ + ++    + + G + T              F  DPD   +E 
Sbjct: 64  DKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIEL 123

Query: 210 TQ 211
            +
Sbjct: 124 IE 125

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]} Length = 130

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

 Score = 59.6 bits (143), Expect = 2e-12
 Identities = 16/122 (13%), Positives = 34/122 (27%), Gaps = 11/122 (9%)

Query: 93  SVHHVGILCENLERSLEFYQNILGLEINEARPH-DKLPYRGAWLWVGAEMIHLMELPNPD 151
            + H+  +  +LER     + +       A         R  +  +G   + +M+     
Sbjct: 4   GLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGDIWVAIMQGEKLA 63

Query: 152 PLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANAL 207
                           I   D  +    + K G+     +        +I+  D D +  
Sbjct: 64  E------RSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSIYFYDDDNHMF 117

Query: 208 EF 209
           E 
Sbjct: 118 EL 119

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]} Length = 134

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 57.2 bits (137), Expect = 2e-11
 Identities = 25/118 (21%), Positives = 48/118 (40%), Gaps = 11/118 (9%)

Query: 93  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 152
            ++H+ +   +L  S+ FY+++LG  +           +GA+L +G+  + L   P    
Sbjct: 4   GLNHLTLAVADLPASIAFYRDLLGFRLEAR------WDQGAYLELGSLWLCLSREPQYGG 57

Query: 153 LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISY-TLSKSGRPAIFTRDPDANALEF 209
               P          IA  D ++    L   G+     ++S   + +  DPD + LE 
Sbjct: 58  ----PAADYTHYAFGIAAADFARFAAQLRAHGVREWKQNRSEGDSFYFLDPDGHRLEA 111

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.9 bits (136), Expect = 7e-11
 Identities = 21/144 (14%), Positives = 46/144 (31%), Gaps = 27/144 (18%)

Query: 95  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE-------------- 140
               +  ++ ++SL+FY  +LG+ + +      + +   +L    +              
Sbjct: 25  QQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWA 84

Query: 141 -----MIHLMELPNPDPLSGRPEHGGRD-----RHTCIAIRDVSKLKMILDKAGISYT-- 188
                 + L      +    +  H G        H  IA+ DV       ++ G+ +   
Sbjct: 85  LSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKK 144

Query: 189 -LSKSGRPAIFTRDPDANALEFTQ 211
                 +   F +DPD   +E   
Sbjct: 145 PDDGKMKGLAFIQDPDGYWIEILN 168

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]} Length = 140

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

 Score = 55.8 bits (133), Expect = 1e-10
 Identities = 24/118 (20%), Positives = 46/118 (38%), Gaps = 8/118 (6%)

Query: 93  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 152
           S++H+ +   +L++S+ F+  +LGL ++           G      +       +P    
Sbjct: 4   SLNHLTLAVSDLQKSVTFWHELLGLTLHARWNTGAYLTCGDLWVCLSYDEARQYVP---- 59

Query: 153 LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS-KSGRPAIFTRDPDANALEF 209
                E         +A  D   L   L++AG++     KS   + +  DPD + LE 
Sbjct: 60  ---PQESDYTHYAFTVAEEDFEPLSQRLEQAGVTIWKQNKSEGASFYFLDPDGHKLEL 114

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 162

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 54.9 bits (131), Expect = 2e-10
 Identities = 13/120 (10%), Positives = 32/120 (26%)

Query: 90  GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 149
             V   H  +  + L  + + +  +LG  + E    +       +L +  +   +  + +
Sbjct: 2   AAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAFIHH 61

Query: 150 PDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEF 209
           P+           +    +                       +    I+  DP  N  E 
Sbjct: 62  PEKGRLHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEV 121

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 170

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 54.4 bits (130), Expect = 5e-10
 Identities = 12/127 (9%), Positives = 31/127 (24%), Gaps = 9/127 (7%)

Query: 88  DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMEL 147
            + +  +  V +    L++       I G          +      +  +  E    + +
Sbjct: 7   KHQIQGMGSVELTVRRLDKMASTLTEIFGY-----TEVSRNDQEAIFQSIKGEAFGEIVV 61

Query: 148 PNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS----GRPAIFTRDPD 203
              D  + +P  G           D              +  S         +++ R+ +
Sbjct: 62  KYLDGPTEKPGRGSIHHLAIRVKNDAELAYWEEQVKQRGFHSSGIIDRFYFKSLYFRESN 121

Query: 204 ANALEFT 210
               E  
Sbjct: 122 GILFEIA 128

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 54.1 bits (129), Expect = 6e-10
 Identities = 19/120 (15%), Positives = 37/120 (30%), Gaps = 2/120 (1%)

Query: 91  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 150
           +V + H   +  ++ R   + +  LG  ++E           AW+     +         
Sbjct: 3   LVRLDHFNQVTPDVPRGRAYLE-DLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGGN 61

Query: 151 DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGR-PAIFTRDPDANALEF 209
            P          ++H  I I D      I D+               ++  DPD + +E 
Sbjct: 62  GPRMHHVAFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEI 121

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

 Score = 51.5 bits (122), Expect = 2e-09
 Identities = 12/116 (10%), Positives = 28/116 (24%), Gaps = 9/116 (7%)

Query: 99  ILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPE 158
           +   ++  ++EF+ + LG                A +      + +  + +         
Sbjct: 10  LTARDVAEAVEFWTDRLGFSRVFVEDDF------AGVVRDDVTLFISAVQDQVVPDNTQA 63

Query: 159 HGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP---AIFTRDPDANALEFTQ 211
                    +       +      A          +P       RDP  N + F  
Sbjct: 64  WVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWGREFALRDPAGNCVHFVA 119

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]} Length = 113

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

 Score = 49.4 bits (116), Expect = 1e-08
 Identities = 15/118 (12%), Positives = 32/118 (27%), Gaps = 10/118 (8%)

Query: 94  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 153
           + H+ +   ++  + EF +   GL  +  R +     R    ++   M            
Sbjct: 4   IKHLNLTVADVVAAREFLEKYFGLTCSGTRGNAFAVMRDNDGFILTLMKGKEV------- 56

Query: 154 SGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-AIFTRDPDANALEFT 210
             +            +   V K+   L + G      K       +   P    +E  
Sbjct: 57  --QYPKTFHVGFPQESEEQVDKINQRLKEDGFLVEPPKHAHAYTFYVEAPGGFTIEVM 112

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]} Length = 115

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 48.7 bits (115), Expect = 2e-08
 Identities = 17/124 (13%), Positives = 43/124 (34%), Gaps = 15/124 (12%)

Query: 93  SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP 152
           +++ + I+  N+ +     ++IL  + + A           +      ++       P  
Sbjct: 2   NLNQLDIIVSNVPQVCADLEHILDKKADYANDG-----FAQFTIGSHCLMLSQNHLVP-- 54

Query: 153 LSGRPEHGGRDRHTCIAIRDV----SKLKMILDKAGISYTLSKSGRPAIFTRDPDANALE 208
                E+        I + DV     +L  +  K     T++  G  ++  + P    L+
Sbjct: 55  ----LENFQSGIIIHIEVEDVDQNYKRLNELGIKVLHGPTVTDWGTESLLVQGPAGLVLD 110

Query: 209 FTQV 212
           F ++
Sbjct: 111 FYRM 114

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

 Score = 48.8 bits (115), Expect = 3e-08
 Identities = 17/138 (12%), Positives = 40/138 (28%), Gaps = 17/138 (12%)

Query: 91  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLW---------VGAEM 141
            + + HV   C + + + ++YQ   G        + +       +             ++
Sbjct: 5   FICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQV 64

Query: 142 IHLMELPNPDPLSGRPEHGGRD-RHTCIAIRDVSKLKMILDKAGISYT-----LSKSGRP 195
           +  +   +         +G     H    + D+  +   L + G+        L   G  
Sbjct: 65  MAPLNDESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNR 124

Query: 196 AIF--TRDPDANALEFTQ 211
             F   +      +E TQ
Sbjct: 125 INFMHPKSGKGVLIELTQ 142

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 48.4 bits (114), Expect = 5e-08
 Identities = 20/125 (16%), Positives = 38/125 (30%), Gaps = 14/125 (11%)

Query: 90  GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 149
           GV+   HV +   ++ ++LE Y  +LGL        D+      +L    E+     +  
Sbjct: 4   GVMRPGHVQLRVLDMSKALEHYVELLGLI-----EMDRDDQGRVYLKAWTEVDKFSLVLR 58

Query: 150 PDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-----AIFTRDPDA 204
                G    G +        +    L       G +     +G        +  + P  
Sbjct: 59  EADEPGMDFMGFKVVDEDALRQLERDLM----AYGCAVEQLPAGELNSCGRRVRFQAPSG 114

Query: 205 NALEF 209
           +  E 
Sbjct: 115 HHFEL 119

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

 Score = 48.1 bits (113), Expect = 6e-08
 Identities = 15/140 (10%), Positives = 39/140 (27%), Gaps = 19/140 (13%)

Query: 91  VVSVHHVGILCENLERSLEFYQNILGLEINE------------ARPHDKLPYRGAWLWVG 138
           ++ + +V I+ E+L+ ++ F++ I                         +         G
Sbjct: 7   LLRMDNVSIVVESLDNAISFFEEIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDG 66

Query: 139 AEMIHLMELPNPDPLSGRPEHGGRD---RHTCIAIRDVSKLKMILDKAGISY----TLSK 191
              I L     P  ++                  + D+ ++   L K G          +
Sbjct: 67  HSRIELSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYE 126

Query: 192 SGRPAIFTRDPDANALEFTQ 211
           +     + R  +   +   +
Sbjct: 127 NSYRLCYIRGVEGILIGLAE 146

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

 Score = 47.6 bits (112), Expect = 7e-08
 Identities = 17/125 (13%), Positives = 30/125 (24%), Gaps = 9/125 (7%)

Query: 96  HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG 155
            +      L+  + FY+  L L+                +  G                 
Sbjct: 12  RIARPTGQLDEIIRFYEEGLCLKRIG---EFSQHNGYDGVMFGLPHADYHLEFTQYEGGS 68

Query: 156 RPEHGGRDRHTCIAIRDVSKLKMI---LDKAGISYTLSKS---GRPAIFTRDPDANALEF 209
                  D      + +  +L  I   L   G     S++       +   DPD   + F
Sbjct: 69  TAPVPHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGGVTIEDPDGWRIVF 128

Query: 210 TQVDG 214
               G
Sbjct: 129 MNSKG 133

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]} Length = 128

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

 Score = 46.6 bits (109), Expect = 1e-07
 Identities = 21/124 (16%), Positives = 40/124 (32%), Gaps = 7/124 (5%)

Query: 94  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 153
           +    ++ E++ +S+EFY+  +G+EI                 +      +  + + DP 
Sbjct: 3   ISLFAVVVEDMAKSMEFYRK-MGVEIPAEADSAPHTEAVLDGGIRLAWDTVETVRSYDPE 61

Query: 154 SGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK------SGRPAIFTRDPDANAL 207
              P  G R           S  K   +     Y           G+     +DPD N +
Sbjct: 62  WQAPTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRYAIVKDPDGNVV 121

Query: 208 EFTQ 211
           +   
Sbjct: 122 DLFA 125

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]} Length = 131

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

 Score = 46.1 bits (108), Expect = 2e-07
 Identities = 18/126 (14%), Positives = 36/126 (28%), Gaps = 19/126 (15%)

Query: 91  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 150
           + S+ ++G    ++     F    LGL       +      G    + +    +      
Sbjct: 2   IRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTDN------GDLFRIDSRAWRIAVQQGE 55

Query: 151 DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-------AIFTRDPD 203
                     G   +       ++++   L +AGI+ T   +           I   DP 
Sbjct: 56  VD---DLAFAG---YEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPF 109

Query: 204 ANALEF 209
              LE 
Sbjct: 110 GLPLEI 115

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.6 bits (107), Expect = 4e-07
 Identities = 14/101 (13%), Positives = 30/101 (29%), Gaps = 5/101 (4%)

Query: 90  GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN 149
             +  H V     N +++  FY N +G E    +  +          +    I  +    
Sbjct: 8   RFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVFVLCSA 67

Query: 150 PDPLSG-----RPEHGGRDRHTCIAIRDVSKLKMILDKAGI 185
            +P +        +HG   +     + D   +     + G 
Sbjct: 68  LNPWNKEMGDHLVKHGDGVKDIAFEVEDCEHIVQKARERGA 108

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 146

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 44.6 bits (104), Expect = 8e-07
 Identities = 19/124 (15%), Positives = 39/124 (31%), Gaps = 15/124 (12%)

Query: 91  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 150
           +V   ++ I+  +L +S EFY ++LGL + E   +               ++    +   
Sbjct: 14  IVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDENTIYLRSLEEFIHHNLVLRQGPIAAV 73

Query: 151 DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-----AIFTRDPDAN 205
                         +   +  +V   +    + G      K G       ++   DP   
Sbjct: 74  ----------AAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGF 123

Query: 206 ALEF 209
             EF
Sbjct: 124 PYEF 127

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 224

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 44.3 bits (104), Expect = 2e-06
 Identities = 14/111 (12%), Positives = 29/111 (26%), Gaps = 13/111 (11%)

Query: 88  DYGVVSVHHVGILCENLERSLEFYQNILGLEI-------NEARPHDKLPYRGAWLWVGAE 140
           DYG+    H+      L  +  ++    G          +       L            
Sbjct: 4   DYGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENV 63

Query: 141 MIHLMELPNPDPLSGRPE------HGGRDRHTCIAIRDVSKLKMILDKAGI 185
           ++ L E  +      + +       G   +H  +A  DV +    +     
Sbjct: 64  LLPLNEPVHGTKRRSQIQTFLDHHGGPGVQHMALASDDVLRTLREMQARSA 114

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 163

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 43.3 bits (101), Expect = 4e-06
 Identities = 16/105 (15%), Positives = 31/105 (29%), Gaps = 8/105 (7%)

Query: 89  YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV--GAEMIHLME 146
           + V  +  V     N +++  +Y    G+++      +      A   +  G+    L  
Sbjct: 3   FPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTS 62

Query: 147 LPNPDPLSGRP------EHGGRDRHTCIAIRDVSKLKMILDKAGI 185
           +  P    G        EHG       I + D         + G 
Sbjct: 63  VIKPATPWGHFLADHVAEHGDGVVDLAIEVPDARAAHAYAIEHGA 107

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]} Length = 156

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

 Score = 42.8 bits (100), Expect = 4e-06
 Identities = 20/124 (16%), Positives = 37/124 (29%), Gaps = 11/124 (8%)

Query: 94  VHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL 153
           + H      +  +++ FY  +LG  +++       P            +H     +   L
Sbjct: 11  IGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAH----FLHCNGRHHTIAL 66

Query: 154 SGRPEHGGRDRHT--CIAIRDVSKLKMILDKAGI-SYTLSKSGRP---AIFTRDPDAN-A 206
           +  P              I DV      LD AG  +  L +       + +   P     
Sbjct: 67  AAFPIPKRIHHFMLQANTIDDVGYAFDRLDAAGRITSLLGRHTNDQTLSFYADTPSPMIE 126

Query: 207 LEFT 210
           +EF 
Sbjct: 127 VEFG 130

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]} Length = 132

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

 Score = 41.5 bits (96), Expect = 1e-05
 Identities = 17/129 (13%), Positives = 37/129 (28%), Gaps = 25/129 (19%)

Query: 91  VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP 150
           +  + ++G   +++     F    +GL               A          +   P  
Sbjct: 2   IERLGYLGFAVKDVPAWDHFLTKSVGLM------AAGSAGDAALYRADQRAWRIAVQPGE 55

Query: 151 DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDK---AGISYTLSKSGRP-------AIFTR 200
                         +  + + D + L+ + DK   AG+++T               +  +
Sbjct: 56  LD---------DLAYAGLEVDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQ 106

Query: 201 DPDANALEF 209
           DP    LE 
Sbjct: 107 DPFGLPLEI 115

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]} Length = 111

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 40.4 bits (93), Expect = 2e-05
 Identities = 17/118 (14%), Positives = 29/118 (24%), Gaps = 16/118 (13%)

Query: 96  HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG 155
              I      R+  FY +ILG+                      E    +          
Sbjct: 5   VANIATPEPARAQAFYGDILGMP------VAMDHGWIVTHASPLEAHAQVSFAREGG--- 55

Query: 156 RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANALEF 209
               G       I + +  ++   + KAG+               +F RDP    +  
Sbjct: 56  ---SGTDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAWGVQRLFLRDPFGKLINI 110

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 172

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 41.0 bits (95), Expect = 3e-05
 Identities = 8/57 (14%), Positives = 20/57 (35%)

Query: 89  YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLM 145
           +  ++ HHV + C +   +   +   LG  +             A L + +  +  +
Sbjct: 9   FHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFL 65

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]} Length = 122

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

 Score = 39.7 bits (91), Expect = 3e-05
 Identities = 12/115 (10%), Positives = 27/115 (23%), Gaps = 9/115 (7%)

Query: 99  ILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPE 158
           +   ++  ++ F+ + LG E +              +  G   +H+    +         
Sbjct: 11  LTAVDVPANVSFWVDTLGFEKDFGDRDFA------GVRRGDIRLHISRTEHQIVADNTSA 64

Query: 159 HGGRDRHTCIAIRDVSKLKMILDKAGISYTL---SKSGRPAIFTRDPDANALEFT 210
                    +       +                          RDP  N + FT
Sbjct: 65  WIEVTDPDALHEEWARAVSTDYADTSGPAMTPVGESPAGREFAVRDPAGNCVHFT 119

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 38.8 bits (89), Expect = 7e-05
 Identities = 15/115 (13%), Positives = 24/115 (20%), Gaps = 3/115 (2%)

Query: 99  ILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPE 158
           +   + + +  FY+  LG  I                 +     H    P     S    
Sbjct: 8   LPSRDFDSTAAFYER-LGFGI--VFRDAGWMILQRGDLMLEFFAHPGLDPLASWFSCCLR 64

Query: 159 HGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVD 213
                           +          +  L   G       DPD   L   Q +
Sbjct: 65  LDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLLRLIQNE 119

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 167

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 36.7 bits (84), Expect = 6e-04
 Identities = 9/62 (14%), Positives = 20/62 (32%), Gaps = 1/62 (1%)

Query: 89  YGVVSVHHVGILCENLERSLEFYQNILGLE-INEARPHDKLPYRGAWLWVGAEMIHLMEL 147
           + V   HH+   C +       +   LG+    ++          ++L    ++  L   
Sbjct: 8   FKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTA 67

Query: 148 PN 149
           P 
Sbjct: 68  PY 69

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	214
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	99.86
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	99.85
d1nkia_	134	Fosfomycin resistance protein A (FosA) {Pseudomona	99.84
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	99.84
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	99.84
d2i7ra1	115	Hypotheical protein SP0731 {Streptococcus pneumoni	99.84
d1f9za_	135	Glyoxalase I (lactoylglutathione lyase) {Escherich	99.83
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	99.83
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.83
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.82
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.82
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.81
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.81
d2c21a1	139	Glyoxalase I (lactoylglutathione lyase) {Leishmani	99.8
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.79
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	99.78
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.76
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	99.76
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.75
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.75
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.75
d2pjsa1	111	Uncharacterized protein Atu1953 {Agrobacterium tum	99.75
d1twua_	137	Hypothetical protein YycE {Bacillus subtilis [TaxI	99.73
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.73
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.72
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.72
d1jifa_	122	Bleomycin resistance protein, BRP {Streptomyces ve	99.68
d1ecsa_	120	Bleomycin resistance protein, BRP {Klebsiella pneu	99.67
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.61
d1xrka_	120	Bleomycin resistance protein, BRP {Streptoalloteic	99.59
d1xy7a_	135	Hypothetical protein At5g48480 {Thale cress (Arabi	99.58
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.4
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.34
d1t47a2	199	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.33
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.3
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.24
d1u6la_	137	Hypothetical protein PA1353 {Pseudomonas aeruginos	99.11
d1u7ia_	134	Hypothetical protein PA1358 {Pseudomonas aeruginos	98.8
d1tsja_	129	Hypothetical protein MW1090 {Staphylococcus aureus	98.33
d1u69a_	156	Hypothetical protein PA2721 {Pseudomonas aeruginos	97.32
d7reqa2	168	Methylmalonyl-CoA mutase alpha subunit, C-terminal	95.26
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	94.57
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	94.19
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	94.13
d1xrsb1	160	D-lysine 5,6-aminomutase beta subunit KamE, C-term	93.38
d1ccwa_	137	Glutamate mutase, small subunit {Clostridium cochl	93.33
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	92.73
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	91.72
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	89.92
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	89.74
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	89.19
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	88.4
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	87.63
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	87.61
d3bula2	156	Methionine synthase, C-terminal domain {Escherichi	84.47
d2g3aa1	137	Probable acetyltransferase Atu2258 {Agrobacterium	83.9
d1k4na_	190	Hypothetical protein YecM (EC4020) {Escherichia co	82.97
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	82.37
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	81.84
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	80.64

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=99.86  E-value=4.9e-21  Score=140.81  Aligned_cols=115  Identities=15%  Similarity=0.220  Sum_probs=91.0

Q ss_pred             eeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCC-CCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEE
Q 028083           90 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD-KLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  168 (214)
Q Consensus        90 ~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~-~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf  168 (214)
                      |+++|+||.|.|+|++++++||+++|||++.+..+.. .......++..++..+.+.....+.        ..+..|++|
T Consensus         1 Mi~~i~Hi~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~f   72 (130)
T d1r9ca_           1 MIEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGDIWVAIMQGEKLA--------ERSYNHIAF   72 (130)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEETTEEEEEEECCCCS--------SCCSCEEEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHhcCCEEEEEcCCccccceeEEEEecCCEEEeeccccccc--------ccceeeeee
Confidence            6789999999999999999999999999998764433 2334567788888777766543321        235689999


Q ss_pred             EEC--CHHHHHHHHHhCCCeEEeec----CCceEEEEEcCCCCeEEEEee
Q 028083          169 AIR--DVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       169 ~V~--dv~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      .|+  |+++++++++++|+++..++    .+++.+||+|||||+|||++.
T Consensus        73 ~v~~~dv~~~~~~l~~~gv~i~~~~~~~~~~~~~~~~~DPdGn~iEl~~~  122 (130)
T d1r9ca_          73 KIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSIYFYDDDNHMFELHTG  122 (130)
T ss_dssp             ECCGGGHHHHHHHHHHHTCCBCCCCC-----CCEEEEECTTSCEEEEECC
T ss_pred             cccHHHHHHHHHHHHHCCCeEecCCcccCCCEEEEEEECCCCCEEEEEEC
Confidence            886  89999999999999985432    357889999999999999874

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=99.85  E-value=1.4e-20  Score=140.93  Aligned_cols=122  Identities=14%  Similarity=0.254  Sum_probs=91.7

Q ss_pred             eeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCC-----------CCCceEEEEEEC--CeEEEEEecCCCCCCCC-
Q 028083           90 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD-----------KLPYRGAWLWVG--AEMIHLMELPNPDPLSG-  155 (214)
Q Consensus        90 ~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~-----------~~~~~~~~l~~g--~~~l~l~~~~~~~~~~~-  155 (214)
                      .+++++||+|.|+|+++|.+||++ |||++....+..           ......+++...  ...++++.......... 
T Consensus         6 ~~~ri~Hv~i~v~Dle~s~~FY~~-LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~   84 (149)
T d1ss4a_           6 KLLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRFLTPPTIADH   84 (149)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEEEESCCCCBC
T ss_pred             CCCEEeEEEEEeCCHHHHHHHHHH-cCCcEeeeeccceeeeeeeeccCCCceeEEEEeecccceEEEEEeeccccCcccc
Confidence            458999999999999999999998 999988653221           222344556553  35677765543332222 


Q ss_pred             --CCCCCCcceEEEEEECCHHHHHHHHHhCCCeEEee----cCCceEEEEEcCCCCeEEEEee
Q 028083          156 --RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       156 --~~~~g~g~~hiaf~V~dv~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~iEl~~~  212 (214)
                        .+....|++|++|+|+|+++++++|++.|+++..+    ..+.+.+|++|||||.|||+|.
T Consensus        85 ~~~~~~~~g~~hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~e~  147 (149)
T d1ss4a_          85 RTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENSYRLCYIRGVEGILIGLAEE  147 (149)
T ss_dssp             TTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETTTEEEEEEECGGGCEEEEEEE
T ss_pred             cccCCCCcceeEEEEeechhHHHHHHHHHCCCeEccCCeECCCCeEEEEEECCCCCEEEEEEc
Confidence              23345688999999999999999999999998533    3457789999999999999985

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.84  E-value=4.2e-20  Score=136.64  Aligned_cols=110  Identities=22%  Similarity=0.371  Sum_probs=88.9

Q ss_pred             eeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEEE
Q 028083           90 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  169 (214)
Q Consensus        90 ~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~  169 (214)
                      |+++|+||+|.|+|++++.+||+++||+++..+.+      ...++..++..++..........      ..+..|++|.
T Consensus         1 mi~~i~Hv~l~v~d~~~~~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~------~~~~~h~~~~   68 (134)
T d1nkia_           1 MLTGLNHLTLAVADLPASIAFYRDLLGFRLEARWD------QGAYLELGSLWLCLSREPQYGGP------AADYTHYAFG   68 (134)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEEETTEEEEEEECTTCCCC------CSSSCEEEEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHhhCCeEEEecc------ceeeeecCCeEEEEeeecccccc------ccccccchhc
Confidence            68899999999999999999999999999987654      23567888877776655443222      2345677777


Q ss_pred             EC--CHHHHHHHHHhCCCeEEeec-CCceEEEEEcCCCCeEEEEe
Q 028083          170 IR--DVSKLKMILDKAGISYTLSK-SGRPAIFTRDPDANALEFTQ  211 (214)
Q Consensus       170 V~--dv~~~~~~l~~~G~~~~~~~-~g~~~~~~~DPdG~~iEl~~  211 (214)
                      ++  |+++++++|+++|+++...+ .+++.+||+|||||+|||++
T Consensus        69 ~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~f~DPdGn~iEl~~  113 (134)
T d1nkia_          69 IAAADFARFAAQLRAHGVREWKQNRSEGDSFYFLDPDGHRLEAHV  113 (134)
T ss_dssp             ECHHHHHHHHHHHHHTTCCEEECCCSSSCEEEEECTTCCEEEEES
T ss_pred             cccchHHHHHHHHHHCCCcCccCCCcceeEEEEECCCCCEEEEEE
Confidence            75  99999999999999987654 44788999999999999976

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=99.84  E-value=4e-21  Score=142.90  Aligned_cols=126  Identities=13%  Similarity=0.218  Sum_probs=93.9

Q ss_pred             ceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEE------ECCeEEEEEecCCCCCCCCC----CC
Q 028083           89 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLW------VGAEMIHLMELPNPDPLSGR----PE  158 (214)
Q Consensus        89 ~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~------~g~~~l~l~~~~~~~~~~~~----~~  158 (214)
                      -|+++|+||+|.|+|+++|.+||+++||+++..............+..      .+...+++++...+......    ..
T Consensus         3 ~m~~~i~Hi~i~v~Dl~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~   82 (145)
T d1jc4a_           3 DLFICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHN   82 (145)
T ss_dssp             CCCSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTT
T ss_pred             ccceEEeEEEEEeCCHHHHHHHHHhhccCceeeeeeecccceEEEeeeceeccccccchhhhhhhhcccCcccccccccC
Confidence            468999999999999999999999999999876543333333333322      35678888887665443321    23


Q ss_pred             CCCcceEEEEEECCHHHHHHHHHhCCCeEEee-----cCCceEEEE--EcCCCCeEEEEeecC
Q 028083          159 HGGRDRHTCIAIRDVSKLKMILDKAGISYTLS-----KSGRPAIFT--RDPDANALEFTQVDG  214 (214)
Q Consensus       159 ~g~g~~hiaf~V~dv~~~~~~l~~~G~~~~~~-----~~g~~~~~~--~DPdG~~iEl~~~~~  214 (214)
                      .+.|++|+||+|+|+++++++|+++|+++..+     ..|...+|+  +||+|++|||+|.+.
T Consensus        83 ~~~g~~Hia~~v~di~~~~~~l~~~Gv~~~~~~~~~~~~g~~~~f~~p~dp~G~~iEl~e~p~  145 (145)
T d1jc4a_          83 GRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQYPK  145 (145)
T ss_dssp             TCCEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEECCC
T ss_pred             CCCcceEEEEecchHHHHHHHHHHCCCEEeCCCceECCCCCEEEEEeccCCCCeEEEEEECCC
Confidence            45689999999999999999999999997532     133444444  688999999999863

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=99.84  E-value=4.6e-20  Score=137.41  Aligned_cols=114  Identities=24%  Similarity=0.386  Sum_probs=90.8

Q ss_pred             eeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEEE
Q 028083           90 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  169 (214)
Q Consensus        90 ~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~  169 (214)
                      |+++++||+|.|+|++++++||+++|||++.....      ...++..++..+.+.........   +....+.+|++|.
T Consensus         1 Mi~~l~Hi~l~v~d~~~~~~FY~~vLG~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~h~~~~   71 (140)
T d1npba_           1 MLQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN------TGAYLTCGDLWVCLSYDEARQYV---PPQESDYTHYAFT   71 (140)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHTTSCCEEEEEET------TEEEEEETTEEEEEEECTTCCCC---CGGGSCSCEEEEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHHhCCEEEEEec------cccccccccccceeecccccccC---CCcCCccceeeee
Confidence            67899999999999999999999999999986533      23557777776666554433221   2234567899999


Q ss_pred             EC--CHHHHHHHHHhCCCeEEee-cCCceEEEEEcCCCCeEEEEee
Q 028083          170 IR--DVSKLKMILDKAGISYTLS-KSGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       170 V~--dv~~~~~~l~~~G~~~~~~-~~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      ++  |+++++++|+++|+++... ..+++.+||+|||||.|||++.
T Consensus        72 ~~~~d~~~~~~~l~~~Gv~~~~~~~~~~~~~~~~DPdGn~iEi~~~  117 (140)
T d1npba_          72 VAEEDFEPLSQRLEQAGVTIWKQNKSEGASFYFLDPDGHKLELHVG  117 (140)
T ss_dssp             CCHHHHHHHHHHHHHTTCCEEECCCSSSEEEEEECTTCCEEEEEEC
T ss_pred             chHHHHHHHHHHHHHCCCeEeecCCCCceEEEEECCCCCEEEEEEC
Confidence            85  8999999999999998754 4568999999999999999874

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.84  E-value=2.3e-20  Score=135.12  Aligned_cols=110  Identities=16%  Similarity=0.203  Sum_probs=88.3

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEEEEC
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR  171 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V~  171 (214)
                      +.++|+.|.|+|+++|++||+++||+++....+      ..+++..|+..+.+........    ...+.+ .+++|.|+
T Consensus         1 m~l~~i~i~V~di~~a~~FYe~~lg~~~~~~~~------~~~~~~~g~~~l~l~~~~~~~~----~~~~~~-~~~~f~v~   69 (115)
T d2i7ra1           1 MNLNQLDIIVSNVPQVCADLEHILDKKADYAND------GFAQFTIGSHCLMLSQNHLVPL----ENFQSG-IIIHIEVE   69 (115)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET------TEEEEEETTEEEEEESSCSSSC----CCCCSC-EEEEEECS
T ss_pred             CcceEEEEEECCHHHHHHHHHHhhCCceeeecC------CeEEEEEcCceeeeeecccCCC----CCCCcc-eEEEEEEC
Confidence            468999999999999999999999999876533      2366888998888776433211    112333 58999999


Q ss_pred             CHHHHHHHHHhCCCeEEee----cCCceEEEEEcCCCCeEEEEee
Q 028083          172 DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       172 dv~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      |+++++++++++|+++..+    +.|.+.++|+|||||.|||+|.
T Consensus        70 D~d~~~~~l~~~G~~i~~~~~~~~~g~~~~~~~DPdGn~ie~~~~  114 (115)
T d2i7ra1          70 DVDQNYKRLNELGIKVLHGPTVTDWGTESLLVQGPAGLVLDFYRM  114 (115)
T ss_dssp             CHHHHHHHHHHHTCCEEEEEEECTTSCEEEEEECGGGCEEEEEEC
T ss_pred             CHHHHHHHHHhhccccccceEEeeCCeEEEEEECCCCCEEEEEEe
Confidence            9999999999999997643    3567899999999999999985

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

Probab=99.83  E-value=3.1e-20  Score=135.68  Aligned_cols=119  Identities=20%  Similarity=0.330  Sum_probs=84.2

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECC----eEEEEEecCCCCCCCCCCCCCCcceEEE
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRDRHTC  167 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~----~~l~l~~~~~~~~~~~~~~~g~g~~hia  167 (214)
                      +++.|++|.|.|+++|.+||+++|||++....+.........++..+.    ............    ....+.+..|++
T Consensus         1 Mkl~Hv~i~V~Dl~~s~~FY~~iLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~   76 (135)
T d1f9za_           1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVD----KYELGTAYGHIA   76 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCC----CCCCCSSEEEEE
T ss_pred             CcceEEEEEcCCHHHHHHHHHHHhCCEEEeeccccccceeeeeeccceeeeccccccccccccc----cccccccceeec
Confidence            478999999999999999999999999986644344433333333321    111111111111    122345678999


Q ss_pred             EEECCHHHHHHHHHhCCCeEEeec-----CCceEEEEEcCCCCeEEEEeecC
Q 028083          168 IAIRDVSKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQVDG  214 (214)
Q Consensus       168 f~V~dv~~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~iEl~~~~~  214 (214)
                      +.+++++++.++++++|..+...+     .+...+||+|||||+|||+|.++
T Consensus        77 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~q~~~  128 (135)
T d1f9za_          77 LSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKD  128 (135)
T ss_dssp             EECSCHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC--
T ss_pred             cchHHHHHHHHHHHHcCCCeecCCccccCCCeEEEEEECCCCCEEEEEECCC
Confidence            999999999999999999875432     34778899999999999999753

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=99.83  E-value=2.9e-20  Score=133.13  Aligned_cols=107  Identities=16%  Similarity=0.226  Sum_probs=82.0

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEEC-CeEEEEEecCCCCCCCCCCCCCCcceEEEEEE
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  170 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g-~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V  170 (214)
                      ++|+||.|.|+|++++++||+++|||++......     ...|+..+ +..+.+.......        .++..|++|.|
T Consensus         2 m~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~--------~~~~~h~~f~v   68 (113)
T d1xqaa_           2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRGN-----AFAVMRDNDGFILTLMKGKEVQ--------YPKTFHVGFPQ   68 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEETT-----TEEEEECTTCCEEEEEECSSCC--------CCTTCCEEEEC
T ss_pred             CcccEEEEEeCCHHHHHHHHHHhhCCEEEEeecC-----cceeeeecceeeeeeeeeeccc--------ccccceeeeee
Confidence            5899999999999999999999999999865431     22334433 3456665543321        24578999999


Q ss_pred             CC---HHHHHHHHHhCCCeEEeec-CCceEEEEEcCCCCeEEEEe
Q 028083          171 RD---VSKLKMILDKAGISYTLSK-SGRPAIFTRDPDANALEFTQ  211 (214)
Q Consensus       171 ~d---v~~~~~~l~~~G~~~~~~~-~g~~~~~~~DPdG~~iEl~~  211 (214)
                      +|   +++++++++++|+++..++ .+++.+||+|||||+|||+|
T Consensus        69 ~~~~~v~~~~~~l~~~G~~~~~~~~~~~~~~~~~DPdG~~iEi~c  113 (113)
T d1xqaa_          69 ESEEQVDKINQRLKEDGFLVEPPKHAHAYTFYVEAPGGFTIEVMC  113 (113)
T ss_dssp             SSHHHHHHHHHHHHHTTCCCCCCEEC-CEEEEEEETTTEEEEEEC
T ss_pred             ccccchhhhhhhHHHcCCccccCCCCceEEEEEECCCCCEEEEEC
Confidence            86   7789999999999976543 45789999999999999975

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.83  E-value=4.9e-20  Score=141.23  Aligned_cols=116  Identities=15%  Similarity=0.240  Sum_probs=86.7

Q ss_pred             eeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEEE
Q 028083           90 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  169 (214)
Q Consensus        90 ~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~  169 (214)
                      ..++++||+|+|+|++++++||+++|||++.+..+.........|+..+...........+        ..++++|++|.
T Consensus         2 ~~~rldHv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~h~~~~   73 (162)
T d1mpya2           2 AAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAFIHHP--------EKGRLHHVSFH   73 (162)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSBSCSEEEEECS--------SSSEEEEEEEE
T ss_pred             CcccccEEEEECCCHHHHHHHHHHccCCEEEEEEccccccceeeeeecccccccccccccC--------CCCccceeEEE
Confidence            4578999999999999999999999999998776655555555555555432222222222        12468999999


Q ss_pred             ECCHH---HHHHHHHhCCCeEEeec-----CCceEEEEEcCCCCeEEEEeec
Q 028083          170 IRDVS---KLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       170 V~dv~---~~~~~l~~~G~~~~~~~-----~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      +.+++   +++++|++.|+++..++     .+.+++||+|||||.|||++..
T Consensus        74 ~~~~~~~~~~~~~L~~~gv~~~~~p~~~~~g~~~~~y~~DPdGn~iEl~~~~  125 (162)
T d1mpya2          74 LETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGG  125 (162)
T ss_dssp             CSCHHHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECC
T ss_pred             EeeehhhhhHHHHHHHcCCccccCccccCCCCeEEEEEECCCCCEEEEEECC
Confidence            98655   78899999999886432     2368999999999999998753

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.82  E-value=2e-20  Score=139.87  Aligned_cols=121  Identities=16%  Similarity=0.213  Sum_probs=86.0

Q ss_pred             eeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCC-ceEEEEEEC----CeEEEEEecCCCCCCCCCCCCCCcce
Q 028083           90 GVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLP-YRGAWLWVG----AEMIHLMELPNPDPLSGRPEHGGRDR  164 (214)
Q Consensus        90 ~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~-~~~~~l~~g----~~~l~l~~~~~~~~~~~~~~~g~g~~  164 (214)
                      .|++|+||+|.|+|++++.+||+++|||++....+..+.. ....++..+    ...+.+.........   ....++++
T Consensus         3 ~i~gl~Hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~~~   79 (144)
T d1zswa1           3 EIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGRT---YRGTNAIT   79 (144)
T ss_dssp             CCCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCBC---BCCBSEEE
T ss_pred             cccceeeEEEEeCCHHHHHHHHHHHhCCeeEeeeccccCCceeEEEecccccceeeEEeecccccccCC---ccCCCcee
Confidence            4689999999999999999999999999998664422221 112222221    123444433322111   11224579


Q ss_pred             EEEEEECC---HHHHHHHHHhCCCeEEee--cCCceEEEEEcCCCCeEEEEeec
Q 028083          165 HTCIAIRD---VSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       165 hiaf~V~d---v~~~~~~l~~~G~~~~~~--~~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      |+||.|+|   ++++.++|++.|+.+.++  ..+...+||+|||||.|||++.+
T Consensus        80 Hiaf~v~~~~~l~~~~~~l~~~gv~~~~~~~~~~~~~~yf~DPdG~~iEl~~~~  133 (144)
T d1zswa1          80 RIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANRPALQFEDAEGLRLVLLVSN  133 (144)
T ss_dssp             EEEEEESCHHHHHHHHHHHHHTTCEECCSEEETTEEEEEEECTTCCEEEEEECT
T ss_pred             EEEEecCCchhHHHHhhhhhccceeeeCccccCCeEEEEEECCCCCEEEEEEeC
Confidence            99999997   778899999999988643  35788999999999999999864

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.82  E-value=2.1e-20  Score=144.69  Aligned_cols=116  Identities=12%  Similarity=0.184  Sum_probs=84.3

Q ss_pred             cceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECC-e--EEEEEecCCCCCCCCCCCCCCcce
Q 028083           88 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA-E--MIHLMELPNPDPLSGRPEHGGRDR  164 (214)
Q Consensus        88 ~~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~-~--~l~l~~~~~~~~~~~~~~~g~g~~  164 (214)
                      .+.|+|++||.|.|.|++++++||+++|||++....+     ....|...++ .  .+.+.....+.   ..+ ..++++
T Consensus         7 ~~~I~Gl~HV~L~V~Dle~s~~FY~~vLG~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~l~   77 (170)
T d1zswa2           7 KHQIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRND-----QEAIFQSIKGEAFGEIVVKYLDGPT---EKP-GRGSIH   77 (170)
T ss_dssp             GGSCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS-----SEEEEESSTTCSTTCEEEEECCSSB---CBC-CBTCEE
T ss_pred             hHHhCCeeeEEEEeCCHHHHHHHHHHHhCCEEEeecC-----ceEEEEeccCccceEEEeccccccc---ccc-Cccccc
Confidence            4567999999999999999999999999999987643     1223332222 1  22222222221   112 224689


Q ss_pred             EEEEEECC---HHHHHHHHHhCCCeEEee--cCCceEEEEEcCCCCeEEEEee
Q 028083          165 HTCIAIRD---VSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       165 hiaf~V~d---v~~~~~~l~~~G~~~~~~--~~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      ||||.|+|   ++++++++++.|+++.+.  +..++++||+|||||+|||+..
T Consensus        78 HiAf~V~~~~~l~~~~~~l~~~G~~~~~~~~~~~~~s~Yf~DPdG~~iEl~t~  130 (170)
T d1zswa2          78 HLAIRVKNDAELAYWEEQVKQRGFHSSGIIDRFYFKSLYFRESNGILFEIATD  130 (170)
T ss_dssp             EEEEEESSHHHHHHHHHHHHHTTCCCCCCEECSSEEEEEEECTTCCEEEEEEE
T ss_pred             eEEEEeCChHHHHHHHHHHHhcCCCccccccCCCEEEEEEECCCCcEEEEEEC
Confidence            99999985   778899999999998643  3458899999999999999874

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=99.81  E-value=1.2e-19  Score=134.22  Aligned_cols=104  Identities=17%  Similarity=0.168  Sum_probs=83.7

Q ss_pred             eeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeE--EEEEecCCCCCCCCCCCCCCcceEEEE
Q 028083           91 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEM--IHLMELPNPDPLSGRPEHGGRDRHTCI  168 (214)
Q Consensus        91 i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~--l~l~~~~~~~~~~~~~~~g~g~~hiaf  168 (214)
                      |++|+||+|.|+|++++++||+++|||++....+      ..+|++.++..  +.+...  +         .+++.|++|
T Consensus         2 I~~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~~~~l~l~~~--~---------~~~~~h~~f   64 (131)
T d1lgta1           2 IRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD------NGDLFRIDSRAWRIAVQQG--E---------VDDLAFAGY   64 (131)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSBSCSEEEEEC--T---------TCEEEEEEE
T ss_pred             cccccEEEEEeCCHHHHHHHHHHhhCCceeecCC------cceEEeecCCceEEEEecC--C---------CCCceEEEE
Confidence            6899999999999999999999999999987543      34778877643  333322  1         246899999


Q ss_pred             EEC---CHHHHHHHHHhCCCeEEeec-------CCceEEEEEcCCCCeEEEEe
Q 028083          169 AIR---DVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQ  211 (214)
Q Consensus       169 ~V~---dv~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DPdG~~iEl~~  211 (214)
                      .|.   |++++.++|+++|+++...+       .+...+||+|||||+|||+.
T Consensus        65 ~v~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~f~DPdGn~iE~~~  117 (131)
T d1lgta1          65 EVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYY  117 (131)
T ss_dssp             EESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEE
T ss_pred             EEccHHHHHHHHHHHHHcCCceEECCccccccCCceEEEEEECCCCCEEEEEe
Confidence            996   57789999999999987542       34678999999999999985

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.81  E-value=1.3e-19  Score=138.75  Aligned_cols=126  Identities=13%  Similarity=0.131  Sum_probs=98.2

Q ss_pred             CcceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCC-CC-CceEEEEEECCeEEEEEecCCCCCCCCC------CC
Q 028083           87 RDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD-KL-PYRGAWLWVGAEMIHLMELPNPDPLSGR------PE  158 (214)
Q Consensus        87 ~~~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~-~~-~~~~~~l~~g~~~l~l~~~~~~~~~~~~------~~  158 (214)
                      +|+++.++|||+|.|.|+++|++||+++|||++......+ .. ....+.+..++..+.+............      ..
T Consensus         1 ~p~~i~~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~~~~i~l~~~~~~~~~~~~~~~~~~~~   80 (163)
T d1t47a1           1 DPFPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIKPATPWGHFLADHVAE   80 (163)
T ss_dssp             CCSCCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSCCSHHHHHHHHHHHH
T ss_pred             CCCCCceEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecCCEEEEEeccCCCCCccccccchhhhc
Confidence            4788999999999999999999999999999998543222 22 2234447778889999887665433211      23


Q ss_pred             CCCcceEEEEEECCHHHHHHHHHhCCCeEEeec------CC-ceEEEEEcCCCCeEEEEee
Q 028083          159 HGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK------SG-RPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       159 ~g~g~~hiaf~V~dv~~~~~~l~~~G~~~~~~~------~g-~~~~~~~DPdG~~iEl~~~  212 (214)
                      ++.|++|+||+|+|+++++++|+++|+++..++      .| ....++++|+|..++|+|.
T Consensus        81 ~g~G~~hiaf~VdDid~a~~~l~~~Ga~~~~~P~~~~d~~G~v~~a~I~~~g~~~~~lier  141 (163)
T d1t47a1          81 HGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDR  141 (163)
T ss_dssp             HCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEE
T ss_pred             CCCceEEEEEeeCCHHHHHHHHHHCCCeEEecCcceeCCCCEEEEEEEecCCCceEEEEec
Confidence            578999999999999999999999999975432      22 4678899999999999874

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

Probab=99.80  E-value=2.4e-19  Score=131.13  Aligned_cols=118  Identities=21%  Similarity=0.278  Sum_probs=85.8

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCe---EEEEEecCCCCCCCCCCCCCCcceEEEE
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE---MIHLMELPNPDPLSGRPEHGGRDRHTCI  168 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~---~l~l~~~~~~~~~~~~~~~g~g~~hiaf  168 (214)
                      .+++||+|.|.|+++|++||+++|||++..............+...+..   ............   .........++++
T Consensus         2 ~r~~Hv~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~   78 (139)
T d2c21a1           2 RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVT---SYKHDEAYGHIAI   78 (139)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCC---CCCCCSSEEEEEE
T ss_pred             CceEEEEEEeCCHHHHHHHHHHHhCCEeeccccccccceeeeeecccccccccccccccccCcc---cccCCCccceeee
Confidence            5899999999999999999999999999876443333322233332211   111111111111   1123445678999


Q ss_pred             EECCHHHHHHHHHhCCCeEEeecCCceEEEEEcCCCCeEEEEee
Q 028083          169 AIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       169 ~V~dv~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      .++++.++++++...++++.....+...+||+|||||+|||++.
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdGn~iEl~~~  122 (139)
T d2c21a1          79 GVEDVKELVADMRKHDVPIDYEDESGFMAFVVDPDGYYIELLNE  122 (139)
T ss_dssp             EESCHHHHHHHHHHTTCCEEEECSSSSEEEEECTTSCEEEEEEH
T ss_pred             ehhhHHHHHHHHHHcCCceeeCCCCcEEEEEECCCCCEEEEEEC
Confidence            99999999999999999998888888999999999999999984

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.79  E-value=5.3e-19  Score=131.00  Aligned_cols=106  Identities=13%  Similarity=0.150  Sum_probs=83.8

Q ss_pred             eeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEEEE
Q 028083           91 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  170 (214)
Q Consensus        91 i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V  170 (214)
                      |++|+||+|.|+|++++.+||+++|||++.....      ..+|++.++....+.....+         .+++.|++|.|
T Consensus         2 i~~L~hv~i~v~Dl~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~~~~l~~~~~~---------~~~~~h~~f~v   66 (132)
T d1kw3b1           2 IERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG------DAALYRADQRAWRIAVQPGE---------LDDLAYAGLEV   66 (132)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSBSCSEEEEECT---------TCEEEEEEEEC
T ss_pred             cccccEEEEEeCCHHHHHHHHHHHhCCceecccc------ceeeeeeeecceeeeeeccC---------CCCceEEEEEe
Confidence            5799999999999999999999999999987543      34778887653222222221         24689999999


Q ss_pred             C---CHHHHHHHHHhCCCeEEeec-------CCceEEEEEcCCCCeEEEEe
Q 028083          171 R---DVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQ  211 (214)
Q Consensus       171 ~---dv~~~~~~l~~~G~~~~~~~-------~g~~~~~~~DPdG~~iEl~~  211 (214)
                      +   |++++.++++++|+++.+..       .....+||+|||||+|||+.
T Consensus        67 ~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdGn~iE~~~  117 (132)
T d1kw3b1          67 DDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYY  117 (132)
T ss_dssp             SSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEE
T ss_pred             ccHHHHHHHHHHHHHcCCCceecCccccccCCcceEEEEECCCCCEEEEEE
Confidence            6   67889999999999987543       34678999999999999985

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=2.6e-18  Score=132.46  Aligned_cols=123  Identities=17%  Similarity=0.220  Sum_probs=87.1

Q ss_pred             eeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECC-------------------eEEEEEecCCC-
Q 028083           91 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGA-------------------EMIHLMELPNP-  150 (214)
Q Consensus        91 i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~-------------------~~l~l~~~~~~-  150 (214)
                      ..+++|++|.|+|+++|++||+++|||++..............|+..+.                   ....+...... 
T Consensus        21 ~~~l~Hi~l~V~Dl~~si~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  100 (176)
T d1qipa_          21 DFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTE  100 (176)
T ss_dssp             TCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETTGG
T ss_pred             ceEEeEEEEEeCCHHHHHHHHHHhhCCeEeeeecccCCceEEEEeecCCccccccccccccccccccccceeEEEeeccc
Confidence            3579999999999999999999999999886544444444455544321                   11222222211 


Q ss_pred             -CCC-CC--CCCCCCcceEEEEEECCHHHHHHHHHhCCCeEEeec-C--CceEEEEEcCCCCeEEEEeec
Q 028083          151 -DPL-SG--RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK-S--GRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       151 -~~~-~~--~~~~g~g~~hiaf~V~dv~~~~~~l~~~G~~~~~~~-~--g~~~~~~~DPdG~~iEl~~~~  213 (214)
                       ... ..  ......++.|+++.++|+++++++|+++|+++..++ +  +...+||+|||||.|||+|..
T Consensus       101 ~~~~~~~~~~~~~~~g~~h~~~~~~d~~~~~~~l~~~Gv~~~~~p~~g~~~~~~f~~DPdG~~IElvq~~  170 (176)
T d1qipa_         101 DDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPN  170 (176)
T ss_dssp             GCTTCCCBCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCEEEECTTSSSSTTCEEEECTTCCEEEEECTT
T ss_pred             cccCcCccCCCCCccceeEEEeeHHHHHHHHHHHHHCCCEEeeCCccCCceEEEEEECCCCCEEEEEeCC
Confidence             111 11  122345788999999999999999999999997654 2  355688999999999999864

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.76  E-value=3.1e-18  Score=133.01  Aligned_cols=112  Identities=17%  Similarity=0.248  Sum_probs=82.4

Q ss_pred             eeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEEEE
Q 028083           91 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  170 (214)
Q Consensus        91 i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V  170 (214)
                      +++|+||+|.|+|++++++|| +.|||++.+...........+|+..++....+.....+         .++.+|++|.+
T Consensus         3 i~rl~Hv~l~v~Dle~s~~FY-e~LGf~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---------~~~~~H~~f~~   72 (176)
T d1f1ua2           3 LVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGGN---------GPRMHHVAFAT   72 (176)
T ss_dssp             CCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSSSCSEEEEESS---------BSEEEEEEEEC
T ss_pred             eeEeeeEEEEcCCHHHHHHHH-HHCCCEEEEEEecCCcceeeeeeccCccccceeccccc---------CCCccceeEEe
Confidence            478999999999999999999 57999998765544555556667765433333222222         24789999999


Q ss_pred             CC---HHHHHHHHHhCCCeE--Eee--c---CCceEEEEEcCCCCeEEEEee
Q 028083          171 RD---VSKLKMILDKAGISY--TLS--K---SGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       171 ~d---v~~~~~~l~~~G~~~--~~~--~---~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      .+   +.++.++|+++|+..  ...  +   ....++||+|||||+|||+..
T Consensus        73 ~~~~~v~~~~~~l~~~g~~~~~~~~p~~h~~g~~~~~Y~~DPdG~~iEl~~~  124 (176)
T d1f1ua2          73 HEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQ  124 (176)
T ss_dssp             SSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEEC
T ss_pred             ccchhHHHHHHHHHHcCCceeeeecccccCCCCceEEEEECCCCCEEEEEeC
Confidence            84   556778999999853  322  2   236789999999999999864

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=99.76  E-value=1.1e-18  Score=127.94  Aligned_cols=117  Identities=20%  Similarity=0.257  Sum_probs=81.6

Q ss_pred             eEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEE-CCeEEEEEecCCC--CCCCCCCCCCCcceEEEEE
Q 028083           93 SVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNP--DPLSGRPEHGGRDRHTCIA  169 (214)
Q Consensus        93 ~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~-g~~~l~l~~~~~~--~~~~~~~~~g~g~~hiaf~  169 (214)
                      +|+||+|.|.|++++++||++ |||.+........    .+++.. ++..+.+......  ..+.......++..|++|.
T Consensus         2 ri~hv~l~V~D~~~s~~FY~~-Lg~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   76 (128)
T d1klla_           2 RISLFAVVVEDMAKSMEFYRK-MGVEIPAEADSAP----HTEAVLDGGIRLAWDTVETVRSYDPEWQAPTGGHRFAIAFE   76 (128)
T ss_dssp             CCCEEEEEESCHHHHHHHHHH-TTCCCCTTGGGCS----EEEEECGGGCEEEEEEHHHHHHHCTTCCCCCSSCSCEEEEE
T ss_pred             eEeEEEEEcCCHHHHHHHHHH-hCCcccccccccc----ceeeeccceeeeeecccccccccCCCCCCCccccceeEeee
Confidence            689999999999999999977 9998875433221    233333 4445554432111  0111112223445799999


Q ss_pred             ECC---HHHHHHHHHhCCCeEEee----cCCceEEEEEcCCCCeEEEEeecC
Q 028083          170 IRD---VSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVDG  214 (214)
Q Consensus       170 V~d---v~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~iEl~~~~~  214 (214)
                      |++   +++++++|+++|+++..+    ..|.+.+||+|||||+|||+++-|
T Consensus        77 v~~~~~l~~~~~~l~~~G~~~~~~p~~~~~G~~~~~~~DPdG~~iel~~p~p  128 (128)
T d1klla_          77 FPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRYAIVKDPDGNVVDLFAPLP  128 (128)
T ss_dssp             CSSHHHHHHHHHHHHHTTCEEEEEEEECTTSEEEEEEECTTSCEEEEEEECC
T ss_pred             eccchhhHHHHHHHHhccCccccCCeEcCCCcEEEEEECCCCCEEEEEecCC
Confidence            986   777899999999997643    256889999999999999998754

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.75  E-value=1.3e-17  Score=125.19  Aligned_cols=110  Identities=21%  Similarity=0.270  Sum_probs=82.3

Q ss_pred             cceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCe--EEEEEecCCCCCCCCCCCCCCcceE
Q 028083           88 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRH  165 (214)
Q Consensus        88 ~~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~--~l~l~~~~~~~~~~~~~~~g~g~~h  165 (214)
                      +..+++|+||.|.|.|++++++||+++|||++....+      ...++...+.  .+.+.....+         .++++|
T Consensus        11 ~~~i~rl~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~---------~~~~~h   75 (146)
T d1f1ua1          11 APDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE------NTIYLRSLEEFIHHNLVLRQGP---------IAAVAA   75 (146)
T ss_dssp             CCCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS------SEEEEECTTCCSSCSEEEEECS---------SCEEEE
T ss_pred             CCCCcEEeEEEEEeCCHHHHHHHHHhccCcEEEeecC------CceeeecccccccceeeccccC---------CCCCce
Confidence            4458999999999999999999999999999997533      1244443221  1111111111         246899


Q ss_pred             EEEEEC---CHHHHHHHHHhCCCeEEeec----CC-ceEEEEEcCCCCeEEEEee
Q 028083          166 TCIAIR---DVSKLKMILDKAGISYTLSK----SG-RPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       166 iaf~V~---dv~~~~~~l~~~G~~~~~~~----~g-~~~~~~~DPdG~~iEl~~~  212 (214)
                      ++|.+.   |+++++++|+++|+++...+    .+ ++.+||+|||||+|||++.
T Consensus        76 ~~~~~~~~~dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~  130 (146)
T d1f1ua1          76 FAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYE  130 (146)
T ss_dssp             EEEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECC
T ss_pred             eeEeeccchhHHHHHHHHHHcCCceeeccccccCCceEEEEEECCCCcEEEEEEe
Confidence            999997   68899999999999987543    22 6899999999999999863

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=4.7e-18  Score=127.88  Aligned_cols=125  Identities=14%  Similarity=0.122  Sum_probs=93.2

Q ss_pred             ceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCC-C-ceEEEEEECCeEEEEEecCCCCCC-CCC--CCCCCcc
Q 028083           89 YGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKL-P-YRGAWLWVGAEMIHLMELPNPDPL-SGR--PEHGGRD  163 (214)
Q Consensus        89 ~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~-~-~~~~~l~~g~~~l~l~~~~~~~~~-~~~--~~~g~g~  163 (214)
                      -.+.++|||+|.|+|+++|++||+++|||++......+.. . .....+..++..+.+..+...... ...  ..+++|+
T Consensus         7 ~~~~~~dHi~i~V~Dl~~a~~fY~~~lGf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~G~   86 (149)
T d1sqia1           7 GRFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVFVLCSALNPWNKEMGDHLVKHGDGV   86 (149)
T ss_dssp             CEEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSTTCHHHHHHHHHHCSEE
T ss_pred             CceeeEeEEEEEcCCHHHHHHHHhhccceEEEEEecccCCceEEEEEEecCCcEEEEEEeccCCCCchhhhhhhhCCCeE
Confidence            3468999999999999999999999999999855332222 2 223346678888888876544321 111  3467899


Q ss_pred             eEEEEEECCHHHHHHHHHhCCCeEEeec------CC-ceEEEEEcCCCCeEEEEeec
Q 028083          164 RHTCIAIRDVSKLKMILDKAGISYTLSK------SG-RPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       164 ~hiaf~V~dv~~~~~~l~~~G~~~~~~~------~g-~~~~~~~DPdG~~iEl~~~~  213 (214)
                      +|+||+|+|+++++++|+++|+++..++      .| ...++++.|+|..+||+|..
T Consensus        87 ~hiaf~V~di~~~~~~l~~~G~~~~~~P~~~~d~~G~v~~a~i~~~g~~~~~lier~  143 (149)
T d1sqia1          87 KDIAFEVEDCEHIVQKARERGAKIVREPWVEEDKFGKVKFAVLQTYGDTTHTLVEKI  143 (149)
T ss_dssp             EEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEE
T ss_pred             EEEEEEeccHHHHHHHHHHCCCEEccCCeEEECCCCeEEEEEEECCCCCEEEEEEeC
Confidence            9999999999999999999999975332      22 24567788888999999853

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.75  E-value=2e-17  Score=126.72  Aligned_cols=128  Identities=14%  Similarity=0.132  Sum_probs=96.0

Q ss_pred             CCcceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCC-CCCceEEE-EEECCeEEEEEecCCCCCCCC--------
Q 028083           86 IRDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD-KLPYRGAW-LWVGAEMIHLMELPNPDPLSG--------  155 (214)
Q Consensus        86 ~~~~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~-~~~~~~~~-l~~g~~~l~l~~~~~~~~~~~--------  155 (214)
                      ..++.+.+++||+|.|+|++++++||+++|||++......+ .......+ +..++.++.+...........        
T Consensus         5 ~~~~~i~~~dHv~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~   84 (167)
T d1sqda1           5 SDKFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLSAGEIKPTTTA   84 (167)
T ss_dssp             CCSSCEEEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEETTEEEEEEEECCGGGTTTCCGGGCCC
T ss_pred             CCCCCCceEeEEEEEeCCHHHHHHHHHHHhCCeEEEEeeccCCCeeEEEEEeeCCCeeEEEecccccccccccccccccc
Confidence            45888999999999999999999999999999988654332 22233333 556777777665433211110        


Q ss_pred             ----C---------CCCCCcceEEEEEECCHHHHHHHHHhCCCeEEeec----CCceEEEEEcCCCCeEEEEeec
Q 028083          156 ----R---------PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       156 ----~---------~~~g~g~~hiaf~V~dv~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                          .         ..++.|++||||+|+|+++++++|+++|+++..++    .+.+..+++.+++..++|++..
T Consensus        85 ~~~~~~~~~~~~~~~~~~~G~~Hiaf~VdDi~aa~~~l~~~G~~~~~~P~~~~~~~~~a~I~~~gd~~~~~v~r~  159 (167)
T d1sqda1          85 SIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNEAVTIAEVKLYGDVVLRYVSYK  159 (167)
T ss_dssp             SSTTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTTEEEEEEEEETTEEEEEEEEC
T ss_pred             ccccCCcchHHHhhhccCCCceEEEEEeCCHHHHHHHHHHCCCEEecCCeecCCCEEEEEEEccCCcEEEEEecC
Confidence                0         12467999999999999999999999999976443    4567788999999999999864

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.75  E-value=4.2e-18  Score=120.93  Aligned_cols=106  Identities=18%  Similarity=0.214  Sum_probs=77.8

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEEEEC
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR  171 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V~  171 (214)
                      +++ +..|.|+|+++|++||+++|||++....+      ....+..++....++.......      .+.+..|++|.++
T Consensus         2 ~ri-~~~l~v~d~~~a~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~   68 (111)
T d2pjsa1           2 RRV-VANIATPEPARAQAFYGDILGMPVAMDHG------WIVTHASPLEAHAQVSFAREGG------SGTDVPDLSIEVD   68 (111)
T ss_dssp             EEE-EEEEECSCGGGGHHHHTTTTCCCEEEECS------SEEEEEEEEEEEEEEEEESSSB------TTBCCCSEEEEES
T ss_pred             eEE-EEEEEeCCHHHHHHHHHHhhCCceeeccc------ceeEeccccccceeeecccccC------CCCceeEEEEEec
Confidence            556 68999999999999999999999987543      1233444333333333222211      2234468999999


Q ss_pred             CHHHHHHHHHhCCCeEEee----cCCceEEEEEcCCCCeEEEE
Q 028083          172 DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFT  210 (214)
Q Consensus       172 dv~~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~iEl~  210 (214)
                      |+++++++++++|+++..+    ..|.+.+|++|||||+|||.
T Consensus        69 dvd~~~~~l~~~g~~~~~~p~~~~~g~~~~~~~DP~Gn~iei~  111 (111)
T d2pjsa1          69 NFDEVHARILKAGLPIEYGPVTEAWGVQRLFLRDPFGKLINIL  111 (111)
T ss_dssp             CHHHHHHHHHHTTCCCSEEEEECTTSCEEEEEECTTSCEEEEE
T ss_pred             CHHHHHHHHHhhccccccCCeEcCCCcEEEEEECCCCCEEEeC
Confidence            9999999999999987533    35678999999999999985

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

Probab=99.73  E-value=4.9e-18  Score=126.04  Aligned_cols=112  Identities=13%  Similarity=0.180  Sum_probs=79.9

Q ss_pred             EEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCe--EEEEEecCCCCCCCCCCCCCCcceEEEEEECC--
Q 028083           97 VGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD--  172 (214)
Q Consensus        97 V~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~--~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V~d--  172 (214)
                      |.+.|.|++++.+||+++|||++........ ....+|+..++.  .+.+........    +..+.+.+|++|.|+|  
T Consensus        13 Va~pv~Dle~s~~FY~~vLG~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~----~~~~~~~~hlaf~v~~~~   87 (137)
T d1twua_          13 IARPTGQLDEIIRFYEEGLCLKRIGEFSQHN-GYDGVMFGLPHADYHLEFTQYEGGST----APVPHPDSLLVFYVPNAV   87 (137)
T ss_dssp             EEEECSCHHHHHHHHTTTSCCCEEEEEEEET-TEEEEEEESSSSSEEEEEEEETTCCC----CCCCCTTCEEEEECCCHH
T ss_pred             EecccCCHHHHHHHHHhccCCceeeeecccc-ceeEEEecCCCCceeeeccccccccc----ccccccCceEEEEeCCHH
Confidence            4445689999999999999999976533222 345566766554  333433332222    1233456899999985  


Q ss_pred             -HHHHHHHHHhCCCeEEeec---CCceEEEEEcCCCCeEEEEeec
Q 028083          173 -VSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       173 -v~~~~~~l~~~G~~~~~~~---~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                       +++++++|+++|+++..+.   .+.+.+||+||||++|||.+..
T Consensus        88 dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~f~DPDG~~Iel~~~~  132 (137)
T d1twua_          88 ELAAITSKLKHMGYQEVESENPYWSNGGVTIEDPDGWRIVFMNSK  132 (137)
T ss_dssp             HHHHHHHHHHHTTCCEECCSSHHHHSSEEEEECTTCCEEEEESSC
T ss_pred             HHHHHHHHHHHCCCeEeCCCCCCCCceEEEEECCCCCEEEEEcCC
Confidence             7889999999999987544   3577899999999999998754

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.73  E-value=5.9e-17  Score=125.02  Aligned_cols=128  Identities=13%  Similarity=0.101  Sum_probs=97.2

Q ss_pred             CCcceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCC-CCCceEEE-EEECCeEEEEEecCCCCCCCC---C----
Q 028083           86 IRDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD-KLPYRGAW-LWVGAEMIHLMELPNPDPLSG---R----  156 (214)
Q Consensus        86 ~~~~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~-~~~~~~~~-l~~g~~~l~l~~~~~~~~~~~---~----  156 (214)
                      .+...+++++||+|.|.|++++++||++.|||++....... .......+ +..++..+.+...........   .    
T Consensus         6 ~d~~~i~~~~Hi~i~V~D~e~a~~FY~~~LGf~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (172)
T d1sp8a1           6 SDRFHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGADAATAALPSFS   85 (172)
T ss_dssp             CCSSCEEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEETTEEEEEEEECCSSCCGGGCSSTTCC
T ss_pred             CccCCcCEEEEEEEEeCCHHHHHHHHHHhhCceEEEEecccccceeEEEEEeccCCeeeEEeeccCCCchhhhcccccCC
Confidence            45788999999999999999999999999999998653322 22333333 566777777765544332211   0    


Q ss_pred             --------CCCCCcceEEEEEECCHHHHHHHHHhCCCeEEeec----CCceEEEEEcCCCCeEEEEeec
Q 028083          157 --------PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       157 --------~~~g~g~~hiaf~V~dv~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                              ..++.|++||||+|+|+++++++|+++|+++..++    .|.+..+++.|.+..+||++..
T Consensus        86 ~~~~~~~~~~~g~Gi~Hiaf~VdDi~aa~~~l~~~Ga~~~~~P~~~~~g~~~a~v~~~g~~~~~lve~~  154 (172)
T d1sp8a1          86 AAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRGFRLAEVELYGDVVLRYVSYP  154 (172)
T ss_dssp             HHHHHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEETTEEEEEEEEETTEEEEEEECC
T ss_pred             cchhhhhhhhcCCceEEEEEeeCcHHHHHHHHHHCcCEeccCCccCCCCEEEEEEECCCCcEEEEEecC
Confidence                    12578999999999999999999999999986443    4567788888888889999865

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.72  E-value=1.4e-17  Score=124.22  Aligned_cols=106  Identities=17%  Similarity=0.190  Sum_probs=76.9

Q ss_pred             eeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCe----EEEEEecCCCCCCCCCCCCCCcceEE
Q 028083           91 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAE----MIHLMELPNPDPLSGRPEHGGRDRHT  166 (214)
Q Consensus        91 i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~----~l~l~~~~~~~~~~~~~~~g~g~~hi  166 (214)
                      |++|+||.|.|+|++++.+||+++|||++........     .+....+.    ...+.. . .         ..+..|+
T Consensus         5 i~rl~Hv~l~v~D~~~s~~FY~~vLG~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~-~-~---------~~~~~~~   68 (145)
T d1mpya1           5 VMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQGR-----VYLKAWTEVDKFSLVLRE-A-D---------EPGMDFM   68 (145)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECTTSC-----EEEECTTCCBSCSEEEEE-C-S---------SCEEEEE
T ss_pred             CcEeeeEEEEeCCHHHHHHHHHHhhCCEEEEeeccCc-----cceecccccceeeccccc-c-C---------cccceee
Confidence            6899999999999999999999999999986533211     22222221    111211 1 1         1245677


Q ss_pred             EEEEC---CHHHHHHHHHhCCCeEEeec----CC-ceEEEEEcCCCCeEEEEee
Q 028083          167 CIAIR---DVSKLKMILDKAGISYTLSK----SG-RPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       167 af~V~---dv~~~~~~l~~~G~~~~~~~----~g-~~~~~~~DPdG~~iEl~~~  212 (214)
                      ++.+.   |+++++++|+++|+++...+    .+ ++.+||+|||||.|||++.
T Consensus        69 ~~~~~~~~dl~~~~~~L~~~g~~~~~~~~~~~~g~~~~~~f~DPdG~~iEl~~~  122 (145)
T d1mpya1          69 GFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYAD  122 (145)
T ss_dssp             EEEESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESC
T ss_pred             eeeehhHHHHHHHHHHHHHCCCcEEECCCcccCCceEEEEEECCCCCEEEEEEe
Confidence            77765   78899999999999986543    23 5899999999999999863

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.72  E-value=1.5e-17  Score=126.62  Aligned_cols=112  Identities=17%  Similarity=0.234  Sum_probs=80.0

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCC---CCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEE
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEARPH---DKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  168 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~---~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf  168 (214)
                      .||+||+|.|.|++++.+||+++|||++......   ........|+..+.....+.....+        ...+++|+||
T Consensus         9 ~GlgHv~l~v~D~e~t~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~a~~~~~--------~~~gl~Hiaf   80 (156)
T d1kw3b2           9 QGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHTIALAAFP--------IPKRIHHFML   80 (156)
T ss_dssp             GCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCSEEEECCS--------CSSSEEEEEE
T ss_pred             CCcceEEEecCCHHHHHHHHHHhcCceeeeEEeeccCCCCcceeEEEeeccccceeeeccCC--------CCCceeEEEE
Confidence            6999999999999999999999999998754211   1222234456655443333222222        1247899999


Q ss_pred             EEC---CHHHHHHHHHhCCCeEEe-ec---CCceEEEEEcCCCC-eEEEEe
Q 028083          169 AIR---DVSKLKMILDKAGISYTL-SK---SGRPAIFTRDPDAN-ALEFTQ  211 (214)
Q Consensus       169 ~V~---dv~~~~~~l~~~G~~~~~-~~---~g~~~~~~~DPdG~-~iEl~~  211 (214)
                      +|+   |+.+++++|+++|+.+.. ++   ....++|++||||+ .+|+..
T Consensus        81 ~v~~~ddv~~~~d~l~~~G~~~~g~~rH~~~~~~s~Y~~DP~G~~~~E~~~  131 (156)
T d1kw3b2          81 QANTIDDVGYAFDRLDAAGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGW  131 (156)
T ss_dssp             EBSSHHHHHHHHHHHHHTTCBCBCSEEESSSCCEEEEEECSSTTCEEEEEE
T ss_pred             ECCCHHHHHHHHHHHHhcCCceecCcccCCCCeEEEEEECCCCCeEEEEec
Confidence            997   455689999999987542 22   23689999999998 599976

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

Probab=99.68  E-value=3.9e-16  Score=112.59  Aligned_cols=101  Identities=17%  Similarity=0.188  Sum_probs=80.7

Q ss_pred             EEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEEEECCHHHHH
Q 028083           98 GILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLK  177 (214)
Q Consensus        98 ~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V~dv~~~~  177 (214)
                      .|.|.|+++|++||+++|||++....+      ..+++..++..+++........        ....++.+.+.|++.++
T Consensus        10 vL~v~Dl~~s~~FY~~vLG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~~~--------~~~~~~~~~~~~i~~~~   75 (122)
T d1jifa_          10 VLTAVDVPANVSFWVDTLGFEKDFGDR------DFAGVRRGDIRLHISRTEHQIV--------ADNTSAWIEVTDPDALH   75 (122)
T ss_dssp             EEEESSHHHHHHHHHHTTCCEEEEECS------SEEEEEETTEEEEEEECSCHHH--------HTTCEEEEEESCHHHHH
T ss_pred             EEEcCCHHHHHHHHHhhhCCceEecCC------ceeEeeeeeeeeeeeccccccc--------cceeEEEEeechhHHHH
Confidence            589999999999999999999987543      2467888998888877654321        23468999999999999


Q ss_pred             HHHHhCCCeEEe-----------ecCCceEEEEEcCCCCeEEEEee
Q 028083          178 MILDKAGISYTL-----------SKSGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       178 ~~l~~~G~~~~~-----------~~~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      +++++++.....           ...+++.+|++|||||+|||...
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdGn~ief~~~  121 (122)
T d1jifa_          76 EEWARAVSTDYADTSGPAMTPVGESPAGREFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             HHHHTTSCSCTTCTTSCEECCCEEETTEEEEEEECTTCCEEEEEEC
T ss_pred             HHHHhhcceEEeeccccccCccccCCCeEEEEEECCCCCEEEEEeC
Confidence            999999876421           12467899999999999999863

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.67  E-value=1.6e-15  Score=109.38  Aligned_cols=102  Identities=23%  Similarity=0.332  Sum_probs=79.4

Q ss_pred             EEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEEEECCHHHHH
Q 028083           98 GILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLK  177 (214)
Q Consensus        98 ~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V~dv~~~~  177 (214)
                      .|.|.|+++|.+||++ |||++.+..+      ..+++..++..+.+.........       ....++++.++|+++++
T Consensus         7 ~l~v~Dl~~s~~FY~~-LGf~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~d~~~~~   72 (120)
T d1ecsa_           7 NLPSRDFDSTAAFYER-LGFGIVFRDA------GWMILQRGDLMLEFFAHPGLDPL-------ASWFSCCLRLDDLAEFY   72 (120)
T ss_dssp             EEEESCHHHHHHHHHT-TTCEEEEECS------SEEEEEETTEEEEEEECTTCCGG-------GCCCEEEEEESCHHHHH
T ss_pred             EEEeCCHHHHHHHHHH-cCCeeEEecC------ceeeeecceeccccccccccccC-------CCCcEEEEEECCHHHHH
Confidence            3999999999999998 9999987543      24567777777777665543221       12357999999999999


Q ss_pred             HHHHhCCCeEEe-----------ecCCceEEEEEcCCCCeEEEEeec
Q 028083          178 MILDKAGISYTL-----------SKSGRPAIFTRDPDANALEFTQVD  213 (214)
Q Consensus       178 ~~l~~~G~~~~~-----------~~~g~~~~~~~DPdG~~iEl~~~~  213 (214)
                      +++++.|+.+..           ...|.+.+||+|||||+|||.|.+
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~~~~~DPDGn~iei~q~d  119 (120)
T d1ecsa_          73 RQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLLRLIQNE  119 (120)
T ss_dssp             HHHHHTTCCBCSSSSSEEEEEEECTTSSEEEEEECTTSCEEEEEECC
T ss_pred             HHHhhhhhhhccccccccccceecCCCcEEEEEECCCCCEEEEEEcc
Confidence            999999987521           125789999999999999999964

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.61  E-value=3.5e-16  Score=118.47  Aligned_cols=119  Identities=10%  Similarity=0.078  Sum_probs=89.7

Q ss_pred             CcceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCC--CCCCCcce
Q 028083           87 RDYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGR--PEHGGRDR  164 (214)
Q Consensus        87 ~~~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~--~~~g~g~~  164 (214)
                      .|+.+.|++||.|+|+|++++.+||++ |||+...+....    ....++.|+..+.+..  .++++...  .++|+|++
T Consensus         3 np~g~~Gidhv~fav~d~~~~~~~~~~-lGF~~~~~~~~~----~~~l~~~G~i~ll~~~--~~~s~~~~~~~~hg~gv~   75 (150)
T d1cjxa1           3 NPMGLMGFEFIEFASPTPGTLEPIFEI-MGFTKVATHRSK----NVHLYRQGEINLILNN--EPNSIASYFAAEHGPSVC   75 (150)
T ss_dssp             CTTCEEEEEEEEEECSSTTSSHHHHHH-TTCEEEEEESSS----SEEEEEETTEEEEEEC--CSSSHHHHHHHHHSSEEE
T ss_pred             CCCccCCEEEEEEecCCHHHHHHHHHH-hCCEEEecccce----EEEEEecCcEEEEecC--CCCCHhHhHHhhCCCceE
Confidence            377889999999999999999999987 999998654322    2344677886655543  33333222  45899999


Q ss_pred             EEEEEECCHHHHHHHHHhCCCeEEeec--C-CceEEEEEcCCCCeEEEEee
Q 028083          165 HTCIAIRDVSKLKMILDKAGISYTLSK--S-GRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       165 hiaf~V~dv~~~~~~l~~~G~~~~~~~--~-g~~~~~~~DPdG~~iEl~~~  212 (214)
                      |+||+|+|++++++++.++|+++...+  . ......+++|+|.+|.|++.
T Consensus        76 hiaf~V~D~~~a~~~a~~~Ga~~i~~~~~~g~~~~~~i~g~gg~~i~Fv~~  126 (150)
T d1cjxa1          76 GMAFRVKDSQKAYNRALELGAQPIHIDTGPMELNLPAIKGIGGAPLYLIDR  126 (150)
T ss_dssp             EEEEEESCHHHHHHHHHHTTCCBCCCCCCTTCBCCCEEECGGGCEEEEECC
T ss_pred             EEEEEeCCHHHHHHHHHHCCCEEcccCCCCCceeeeEEEcCCCCEEEEECc
Confidence            999999999999999999999875433  2 24456677888888888764

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

Probab=99.59  E-value=1.6e-14  Score=103.27  Aligned_cols=102  Identities=12%  Similarity=0.128  Sum_probs=78.7

Q ss_pred             EEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEEEECCHHH
Q 028083           96 HVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSK  175 (214)
Q Consensus        96 HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V~dv~~  175 (214)
                      +-.|.|+|+++|++||+++|||++....+      ...++..++..+++........        .+..++.+.+.+++.
T Consensus         7 ~pvL~v~D~~~s~~FY~~~LG~~~~~~~~------~~~~~~~~~~~l~~~~~~~~~~--------~~~~~~~~~~~~~~~   72 (120)
T d1xrka_           7 VPVLTARDVAEAVEFWTDRLGFSRVFVED------DFAGVVRDDVTLFISAVQDQVV--------PDNTQAWVWVRGLDE   72 (120)
T ss_dssp             EEEEEESCHHHHHHHHHHTTCCEEEEECS------SEEEEEETTEEEEEEECSCTTT--------GGGCEEEEEEECHHH
T ss_pred             EEEEEECCHHHHHHHHHHhhCCeEEEECC------CeeEEecccceeeccccccccC--------CCCceEEEeeccHHH
Confidence            34589999999999999999999987643      2466788888888876654422        245678999999999


Q ss_pred             HHHHHHhCCCeEE--------ee---cCCceEEEEEcCCCCeEEEEe
Q 028083          176 LKMILDKAGISYT--------LS---KSGRPAIFTRDPDANALEFTQ  211 (214)
Q Consensus       176 ~~~~l~~~G~~~~--------~~---~~g~~~~~~~DPdG~~iEl~~  211 (214)
                      .++.+.+.+....        .+   ..+++.+||+|||||+|||+.
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~DPdGn~ief~~  119 (120)
T d1xrka_          73 LYAEWSEVVSTNFRDASGPAMTEIVEQPWGREFALRDPAGNCVHFVA  119 (120)
T ss_dssp             HHHHHTTTSBSCTTTCSSCEECCCEEETTEEEEEEECTTCCEEEEEE
T ss_pred             HHHHHHHhhhHHhhhcccccccCceecCCEEEEEEECCCCCEEEEEE
Confidence            9988887765531        11   244689999999999999985

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.58  E-value=2.2e-14  Score=105.56  Aligned_cols=115  Identities=11%  Similarity=0.044  Sum_probs=80.2

Q ss_pred             EEEEEcCCHHHHHHHHHHhcCCEEeeecCCCC-------CCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEE
Q 028083           96 HVGILCENLERSLEFYQNILGLEINEARPHDK-------LPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  168 (214)
Q Consensus        96 HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~-------~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf  168 (214)
                      ++.+.++|+++|++||+++||+++.......+       .....+.|..|+..+.+.......... .+...+...++++
T Consensus        10 ~l~v~~~~~~eAi~FY~~~fG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~   88 (135)
T d1xy7a_          10 MLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSFVVCDVSSLPGFS-TAKSEGSGVTFLL   88 (135)
T ss_dssp             EEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEETTEEEEEEEGGGSTTCC-CCCTTSCCCEEEE
T ss_pred             EEEEECCCHHHHHHHHHHHhCCEEEEEEecCCccccccCCcEEEEEEEECCeeeeccccccccccc-cCCCCCcceEEEE
Confidence            45667789999999999999999875432211       122345577888776665543221111 1122223358999


Q ss_pred             EECCHHHHHHHHHhCCCeEEeec----CCceEEEEEcCCCCeEEEEe
Q 028083          169 AIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQ  211 (214)
Q Consensus       169 ~V~dv~~~~~~l~~~G~~~~~~~----~g~~~~~~~DPdG~~iEl~~  211 (214)
                      .|+|++++++++.++|.++..+.    .|.+.++++||+||.|+|.|
T Consensus        89 ~v~d~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~v~Dp~G~~W~i~e  135 (135)
T d1xy7a_          89 GTKDAEAAVAKAVDAGAVKVEVTEAEVELGFKGKVTDPFGVTWIFAE  135 (135)
T ss_dssp             ECSCHHHHHHHHHHTTCEECCCCHHHHHTTEEEEEECTTSCEEEEEC
T ss_pred             eecCcceeEEEeecccceEecCcccccccCEEEEEECCCCCEEEEeC
Confidence            99999999999999999987653    47889999999999999975

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.40  E-value=3e-13  Score=108.45  Aligned_cols=99  Identities=14%  Similarity=0.137  Sum_probs=70.8

Q ss_pred             cceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCC-----CCCceEEEEEE--CCeEEEEEecCCCCCCCCC----
Q 028083           88 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHD-----KLPYRGAWLWV--GAEMIHLMELPNPDPLSGR----  156 (214)
Q Consensus        88 ~~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~-----~~~~~~~~l~~--g~~~l~l~~~~~~~~~~~~----  156 (214)
                      ...+++||||++.|+|++++++||+++|||+.....+..     ........+..  |..++.++++..+......    
T Consensus         4 d~Gl~~IDHI~i~V~dld~a~~fY~~vLGf~~~~~~~~~~i~~~~~~l~s~v~~~~~g~v~~~l~E~~~~~~~~s~i~~F   83 (224)
T d1sp8a2           4 DYGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPVHGTKRRSQIQTF   83 (224)
T ss_dssp             CCSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSSCCEEEEEEECCCSSSCCHHHHH
T ss_pred             CCCcCeeeeeEEeccCHHHHHHHHHHHhCCEEEEEeccccccccceeEEEEEEEcCCCccceeeeeecCCCCCccHHHHH
Confidence            466899999999999999999999999999987543211     11222223333  4567888876544322211    


Q ss_pred             --CCCCCcceEEEEEECCHHHHHHHHHhCCCe
Q 028083          157 --PEHGGRDRHTCIAIRDVSKLKMILDKAGIS  186 (214)
Q Consensus       157 --~~~g~g~~hiaf~V~dv~~~~~~l~~~G~~  186 (214)
                        ...|.|++||||.|+||++++++|+++|+.
T Consensus        84 L~~~~g~GiqHIAf~vdDI~~av~~L~arGv~  115 (224)
T d1sp8a2          84 LDHHGGPGVQHMALASDDVLRTLREMQARSAM  115 (224)
T ss_dssp             HHHHTSSEEEEEEEEETTHHHHHHHHHTSGGG
T ss_pred             HHhccCCCceeEEEEeCCHHHHHHHHHhcccc
Confidence              124579999999999999999999988643

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.34  E-value=1.2e-12  Score=103.27  Aligned_cols=99  Identities=13%  Similarity=0.083  Sum_probs=70.9

Q ss_pred             eeeEeEEEEEcC--CHHHHHHHHHHhcCCEEeeec--CCCCCCceEEEEEEC--CeEEEEEecCCCC-CCCCC---CCCC
Q 028083           91 VVSVHHVGILCE--NLERSLEFYQNILGLEINEAR--PHDKLPYRGAWLWVG--AEMIHLMELPNPD-PLSGR---PEHG  160 (214)
Q Consensus        91 i~~i~HV~l~V~--D~~~a~~FY~~~LGf~~~~~~--~~~~~~~~~~~l~~g--~~~l~l~~~~~~~-~~~~~---~~~g  160 (214)
                      +++||||++.|+  |+++++.||+++|||+.....  +..........+...  ...+.+....... ++...   ...|
T Consensus         3 l~~IDHIa~~V~~~~l~~a~~FY~~vlGf~~~~~~di~~~~~~l~s~~~~~~~~~~~~~l~~~~~~~~sqi~~fl~~~~g   82 (203)
T d1cjxa2           3 LKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLNEESSKGAGQIEEFLMQFNG   82 (203)
T ss_dssp             EEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTTSSCEEEEEEECTTCCSHHHHHHHHHTS
T ss_pred             CCeeCeeEeccChhhHHHHHHHHHHHhCCEEeEEEecCCCcceEEEEEeeccccccceecccCCCCCccHHHHHHHhcCC
Confidence            589999999997  999999999999999988543  222322233334443  4455555544332 22221   2357


Q ss_pred             CcceEEEEEECCHHHHHHHHHhCCCeEEe
Q 028083          161 GRDRHTCIAIRDVSKLKMILDKAGISYTL  189 (214)
Q Consensus       161 ~g~~hiaf~V~dv~~~~~~l~~~G~~~~~  189 (214)
                      .|++||||.|+||.+++++|+++|+++..
T Consensus        83 ~GiqHIAf~vdDI~aav~~L~~~Gv~fL~  111 (203)
T d1cjxa2          83 EGIQHVAFLTDDLVKTWDALKKIGMRFMT  111 (203)
T ss_dssp             SBCCEEEEEESCHHHHHHHHHHTTCCBCC
T ss_pred             CCCceEEEEeCCHHHHHHHHHhcCCcccc
Confidence            89999999999999999999999999753

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.33  E-value=2e-12  Score=101.67  Aligned_cols=101  Identities=11%  Similarity=0.083  Sum_probs=71.2

Q ss_pred             eeeeEeEEEEEcC--CHHHHHHHHHHhcCCEEeeecCC-----CCCCceEEEEEE--CCeEEEEEecCCC--CCCCCC--
Q 028083           90 GVVSVHHVGILCE--NLERSLEFYQNILGLEINEARPH-----DKLPYRGAWLWV--GAEMIHLMELPNP--DPLSGR--  156 (214)
Q Consensus        90 ~i~~i~HV~l~V~--D~~~a~~FY~~~LGf~~~~~~~~-----~~~~~~~~~l~~--g~~~l~l~~~~~~--~~~~~~--  156 (214)
                      ++++||||++.|+  ++++++.||+++|||+.......     ........-+..  +..++.+.++...  .++++.  
T Consensus         3 ~f~~IDHia~avp~~~l~~av~fY~~vfGf~~~~~~~~~di~~~~~~l~s~~~~s~~~~v~l~lne~~~~~~~s~i~~FL   82 (199)
T d1t47a2           3 TFQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPALAKKKSQIDEYL   82 (199)
T ss_dssp             SCCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTTSCSEEEEEEECCSSSCCHHHHHH
T ss_pred             cceeeCceEeccChhhHHHHHHHHHHHhCCeEeeEecccccccceeEEEEeeccccccccceeecccCccccccchhhhh
Confidence            3579999999998  99999999999999998754211     111222222333  3456777654422  232222  


Q ss_pred             -CCCCCcceEEEEEECCHHHHHHHHHhCCCeEEee
Q 028083          157 -PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS  190 (214)
Q Consensus       157 -~~~g~g~~hiaf~V~dv~~~~~~l~~~G~~~~~~  190 (214)
                       ...|+|++||||.|+||.++++.|+++|+++...
T Consensus        83 ~~~~g~GiQHIAl~tdDI~~av~~L~~~G~~fL~~  117 (199)
T d1t47a2          83 EFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDT  117 (199)
T ss_dssp             HHHTSCEEEEEEEECSCHHHHHHHHHHTTCCBCCC
T ss_pred             hhcCCCcceEEEEEcCCHHHHHHHHHHcCCCCCCC
Confidence             2356799999999999999999999999997543

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=3e-12  Score=101.43  Aligned_cols=102  Identities=12%  Similarity=0.075  Sum_probs=72.2

Q ss_pred             CcceeeeEeEEEEEcCC--HHHHHHHHHHhcCCEEeeecCCC-----CCCceEEEEEE--CCeEEEEEecCCCC--CCCC
Q 028083           87 RDYGVVSVHHVGILCEN--LERSLEFYQNILGLEINEARPHD-----KLPYRGAWLWV--GAEMIHLMELPNPD--PLSG  155 (214)
Q Consensus        87 ~~~~i~~i~HV~l~V~D--~~~a~~FY~~~LGf~~~~~~~~~-----~~~~~~~~l~~--g~~~l~l~~~~~~~--~~~~  155 (214)
                      ++..+++||||++.|++  ++++++||+++|||+........     ....+...+..  +..++.+.++....  +.+.
T Consensus        18 p~~gl~~IDHv~~~Vp~~~ld~av~fY~~vfGf~~~~~~~~~~i~~~~~~l~s~~l~s~~~~i~~~lne~~~~~~~sqi~   97 (210)
T d1sqia2          18 PSCNLEIIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPGRKKSQIQ   97 (210)
T ss_dssp             CCCCEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEECCC-----------CEEEEEECTTSCCEEEEEECC-----CHHH
T ss_pred             CCCCcceeCceEeccCchhHHHHHHHHHHHhCCEEEEEecccccCCceeEEEEEEEEecCccccccccccCCCCcccHHH
Confidence            45678999999999987  99999999999999876532211     11122223444  45677787654332  2222


Q ss_pred             C---CCCCCcceEEEEEECCHHHHHHHHHhCCCeEE
Q 028083          156 R---PEHGGRDRHTCIAIRDVSKLKMILDKAGISYT  188 (214)
Q Consensus       156 ~---~~~g~g~~hiaf~V~dv~~~~~~l~~~G~~~~  188 (214)
                      .   ...|.|++||||.|+||.+++++|+++|+++.
T Consensus        98 ~fl~~~~G~GiQHIAf~t~DI~~av~~L~~~Gv~fL  133 (210)
T d1sqia2          98 EYVDYNGGAGVQHIALRTEDIITTIRHLRERGMEFL  133 (210)
T ss_dssp             HHHHHHTSSEEEEEEEEESCHHHHHHHHHHHTCCBC
T ss_pred             HHHhhcCCCCeeEEEEEcCCHHHHHHHHHHcCCCCC
Confidence            1   23588999999999999999999999999975

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.24  E-value=1.4e-11  Score=98.84  Aligned_cols=98  Identities=15%  Similarity=0.148  Sum_probs=69.3

Q ss_pred             cceeeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCC-----ceEEEEEE--CCeEEEEEecCCCCCC---CCC-
Q 028083           88 DYGVVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLP-----YRGAWLWV--GAEMIHLMELPNPDPL---SGR-  156 (214)
Q Consensus        88 ~~~i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~-----~~~~~l~~--g~~~l~l~~~~~~~~~---~~~-  156 (214)
                      +..+++||||++.|+|++++.+||.+.||++...........     .....+..  |..++.+.++..+...   +.. 
T Consensus        17 ~~gl~~IDHI~iaVpdld~a~~~y~~~lG~~~~~~~~~~di~~~~~~l~s~v~~s~~g~v~~~l~E~~~~~~~~sqi~~F   96 (230)
T d1sqda2          17 DYGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVLLPINEPVHGTKRKSQIQTY   96 (230)
T ss_dssp             CSSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTTSCSEEEEEEECCC---CCHHHHH
T ss_pred             CCCcCccCcceecccCHHHHHHHHHHHcCCeeeEEecccccccceeeEeeccccCCCcccceeEEeecCCCCCcchHHHH
Confidence            455799999999999999999999999999887654322211     11112333  4568888876544322   221 


Q ss_pred             --CCCCCcceEEEEEECCHHHHHHHHHhCCC
Q 028083          157 --PEHGGRDRHTCIAIRDVSKLKMILDKAGI  185 (214)
Q Consensus       157 --~~~g~g~~hiaf~V~dv~~~~~~l~~~G~  185 (214)
                        ..+|.|++||||.|+||.+++++|+++|.
T Consensus        97 L~~~~G~GiQHIAf~tdDI~aav~~LrarG~  127 (230)
T d1sqda2          97 LEHNEGAGLQHLALMSEDIFRTLREMRKRSS  127 (230)
T ss_dssp             HHHHTSCEEEEEEEEESCHHHHHHHHHHHGG
T ss_pred             HhhccCCceeEEEEEeCCHHHHHHHHHHhhc
Confidence              23688999999999999999999999643

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.11  E-value=3.2e-09  Score=77.64  Aligned_cols=107  Identities=14%  Similarity=0.029  Sum_probs=72.0

Q ss_pred             cCCHHHHHHHHHHhcCCEEeeecCCCC------------CCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEE
Q 028083          101 CENLERSLEFYQNILGLEINEARPHDK------------LPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  168 (214)
Q Consensus       101 V~D~~~a~~FY~~~LGf~~~~~~~~~~------------~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf  168 (214)
                      -+|.++|++||+++||+++........            .....+-+..++..+.........     +...+...++++
T Consensus        11 ~g~a~eAl~FY~~~fG~e~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g~~~~~~d~~~~~-----~~~~~~~~~~~l   85 (137)
T d1u6la_          11 NGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGSFALMASDNHPAY-----PYEGIKGCSISL   85 (137)
T ss_dssp             SSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETTEEEEEEECCTTS-----CCCCCCSEEEEE
T ss_pred             CCCHHHHHHHHHHHCCCEEEEEEEcccCCccccCCCCCCCeEEEEEEEEcCeEEEecccCCcc-----cccCCCcEEEEE
Confidence            469999999999999999875321111            112234477777666554432221     112233467889


Q ss_pred             EECCHH--HHHHHHHhCCCeEEee----cCCceEEEEEcCCCCeEEEEee
Q 028083          169 AIRDVS--KLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       169 ~V~dv~--~~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      .+++.+  +.+.++.++|.++..+    +.|.+..+|+||+|+.|+|...
T Consensus        86 ~~~~~d~~~~~~~~l~~G~~v~~p~~~~~wG~~~g~v~Dp~G~~W~i~~~  135 (137)
T d1u6la_          86 NVDSKAEAERLFNALAEGGSVQMPLGPTFWAASFGMFTDRFGVAWMVNCE  135 (137)
T ss_dssp             ECSSHHHHHHHHHHHHTTSEEEEEEEEETTEEEEEEEECTTSCEEEEEES
T ss_pred             EcCCHHHHHHHHhhcccCceeecCccccCCCcEEEEEECCCCCEEEEEec
Confidence            888544  5577778889998644    3577889999999999999764

>d1u7ia_ d.32.1.7 (A:) Hypothetical protein PA1358 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1358
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.80  E-value=3.4e-07  Score=66.58  Aligned_cols=111  Identities=8%  Similarity=0.030  Sum_probs=70.3

Q ss_pred             EEEEEcCCHHHHHHHHHHhcCCEEeeec-------CCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEE
Q 028083           96 HVGILCENLERSLEFYQNILGLEINEAR-------PHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  168 (214)
Q Consensus        96 HV~l~V~D~~~a~~FY~~~LGf~~~~~~-------~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf  168 (214)
                      ++.+.-+|.++|++||+++||.+.....       +......-.+-|..++..+.+.........    ..+.+ ..+++
T Consensus         9 yL~f~g~~a~eAi~FY~~~Fg~~~v~~~~~~~~~~~~~~g~v~ha~l~i~~~~i~~~d~~~~~~~----~~~~~-~s~~l   83 (134)
T d1u7ia_           9 FLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGDQSVHCIDSHVRHAF----DFTPA-FSFFV   83 (134)
T ss_dssp             EEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETTEEEEEEEESSCCSC----CCCTT-EEEEE
T ss_pred             EEEECCcCHHHHHHHHHHhCCCeEEEEEEEcCCCCCCCCCCEEEEEEEECCEEEEEecCCCCCCC----CCCCc-eEEEE
Confidence            4455567999999999999998754221       112223334558888887777654322111    12223 46788


Q ss_pred             EECCHHHH--HHHHHhCCCeEEee----cCCceEEEEEcCCCCeEEEEe
Q 028083          169 AIRDVSKL--KMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  211 (214)
Q Consensus       169 ~V~dv~~~--~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~iEl~~  211 (214)
                      .+++.++.  +.+..+.|.++..+    ..|.+...++||.|+.|.|.-
T Consensus        84 ~~~~~d~~~~~~~~l~~gg~v~~p~~~~~~g~~~g~v~D~fGv~W~i~~  132 (134)
T d1u7ia_          84 DCESNAQIERLAEALSDGGKALMPLGDYGFSQRFAWLADRFGVSWQLNL  132 (134)
T ss_dssp             ECCCHHHHHHHHHHHHTTSEEEEEEECCSSSSEEEEEECTTSCEEEEEE
T ss_pred             EeccHHHHHHHHHHHhcCCEEecCcccccccceEEEEECCCCCEEEEEc
Confidence            88754433  44444557676543    357888999999999999863

>d1tsja_ d.32.1.7 (A:) Hypothetical protein MW1090 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein MW1090
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.33  E-value=1.4e-05  Score=57.32  Aligned_cols=101  Identities=12%  Similarity=0.158  Sum_probs=63.0

Q ss_pred             CCHHHHHHHHHHhcCC-EEeeec------CCCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEEEECCHH
Q 028083          102 ENLERSLEFYQNILGL-EINEAR------PHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVS  174 (214)
Q Consensus       102 ~D~~~a~~FY~~~LGf-~~~~~~------~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf~V~dv~  174 (214)
                      +|.++|++||+++||- ++....      +......-.+-|..++..+.+........        .. .++.+.+++.+
T Consensus        14 g~a~eAi~FY~~vFg~~~v~~~~~~~~~~~~~~g~i~ha~l~i~g~~~~~~d~~~~~~--------~~-~s~~v~~~~~~   84 (129)
T d1tsja_          14 NQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNGQVFMAIDANSGTE--------LP-ISLFVTVKDTI   84 (129)
T ss_dssp             SCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETTEEEEEEC---------------C-CCEEEECSSHH
T ss_pred             CCHHHHHHHHHHHcCCcEEEEEEecCCCCCCCCCcEEEEEEEECCEEEEeecCCCCCC--------CC-EEEEeccCCHH
Confidence            6999999999999965 443211      12223334455888887766654332211        11 34777888655


Q ss_pred             H---HHHHHHhCCCeEEee----cCCceEEEEEcCCCCeEEEEee
Q 028083          175 K---LKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       175 ~---~~~~l~~~G~~~~~~----~~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      +   ++++|.+.| ++..+    ..|.+...++||.|+.|.|..+
T Consensus        85 e~~~~~~~L~~gg-~v~~p~~~~~~g~~~g~v~D~fGv~W~i~~p  128 (129)
T d1tsja_          85 EMERLFNGLKDEG-AILMPKTNMPPYREFAWVQDKFGVSFQLALP  128 (129)
T ss_dssp             HHHHHHHHHHTTC-EEEEEEEEETTEEEEEEEECTTSCEEEEEEC
T ss_pred             HHHHHHHHhccCC-EEecccccccccceEEEEECCCCCEEEEeCC
Confidence            4   566776555 65433    3567888999999999999754

>d1u69a_ d.32.1.7 (A:) Hypothetical protein PA2721 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA2721
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.32  E-value=0.0048  Score=45.15  Aligned_cols=102  Identities=13%  Similarity=-0.015  Sum_probs=63.9

Q ss_pred             EEEEcCCHHHHHHHHHHhcCC-EEeee--cC-----CCCCCceEEEEEECCeEEEEEecCCCCCCCCCCCCCCcceEEEE
Q 028083           97 VGILCENLERSLEFYQNILGL-EINEA--RP-----HDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCI  168 (214)
Q Consensus        97 V~l~V~D~~~a~~FY~~~LGf-~~~~~--~~-----~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hiaf  168 (214)
                      .-++-+|.++|.+||+++||- ++...  .+     ......-++.+..++..+..... .+..     ..+.+ .++.+
T Consensus         6 ~L~F~Gna~EAl~FY~~vFg~~~i~~~~~~~~~~p~~~~~~Vmha~l~i~g~~lm~sD~-~~~~-----~~~~~-~sl~l   78 (156)
T d1u69a_           6 CLWYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMGIPCLGLNG-GPAF-----RHSEA-FSFQV   78 (156)
T ss_dssp             EEEESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETTEEEEEEEC-CTTC-----CCCTT-EEEEE
T ss_pred             eeeECCcHHHHHHHHHHHcCCCEEeEEEecCCCCCCCCCCcEEEEEEEECCeEEEeecC-CCCC-----CCCCC-eEEEE
Confidence            345679999999999999964 33321  11     11222334557888866554432 1211     12334 46888


Q ss_pred             EECC---HHHHHHHHHhCCCeEEeecCCceEEEEEcCCCCeEEEEe
Q 028083          169 AIRD---VSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQ  211 (214)
Q Consensus       169 ~V~d---v~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdG~~iEl~~  211 (214)
                      .++|   +++++++|.+.|- +..+ -    -.++|+.|..|.|+.
T Consensus        79 ~~d~~eE~d~~f~~LsegG~-~~~~-~----G~v~DkFGV~Wqi~~  118 (156)
T d1u69a_          79 ATDDQAETDRLWNAIVDNGG-EESA-C----GWCRDKWGISWQITP  118 (156)
T ss_dssp             EESSHHHHHHHHHHHHHTTC-EECS-T----TEEECTTSCEEEEEE
T ss_pred             ecCCHHHHHHHHHHHhccCC-CCCC-C----eEEECCCCCEEEeCh
Confidence            8885   6677888888773 2222 2    259999999999984

>d7reqa2 c.23.6.1 (A:561-728) Methylmalonyl-CoA mutase alpha subunit, C-terminal domain {Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Cobalamin (vitamin B12)-binding domain
family: Cobalamin (vitamin B12)-binding domain
domain: Methylmalonyl-CoA mutase alpha subunit, C-terminal domain
species: Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]

Probab=95.26  E-value=0.0012  Score=49.12  Aligned_cols=51  Identities=12%  Similarity=0.074  Sum_probs=42.6

Q ss_pred             cccccccccEEeeeeccccccccccccceeeccccccceeeeceeeeeeceeeecCc
Q 028083           10 AIPVRHQVNRLSVNFTLTYTSSQFYQTTTVRKCRCNGQFLTTKAKMSVEGGILKKEP   66 (214)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   66 (214)
                      .+++|+|+|+|++|++.+.|..++.+  +++.++..|    ......+.++++++++
T Consensus        82 ~aa~~~~advI~iSs~~~~~~~~~~~--l~~~L~~~g----~~~v~VivGG~ip~~d  132 (168)
T d7reqa2          82 RQAVEADVHVVGVSSLAGGHLTLVPA--LRKELDKLG----RPDILITVGGVIPEQD  132 (168)
T ss_dssp             HHHHHHTCSEEEEEECSSCHHHHHHH--HHHHHHHTT----CTTSEEEEEESCCGGG
T ss_pred             HHHHccCCCEEEEecCcccchHHHHH--HHHHHHhcC----CCCeEEEEeCCCCHHH
Confidence            57899999999999999999999999  899999998    4555566777666543

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.57  E-value=0.061  Score=38.57  Aligned_cols=59  Identities=15%  Similarity=0.061  Sum_probs=42.8

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEE-ECCeEEEEEecCCCC
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLW-VGAEMIHLMELPNPD  151 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~-~g~~~l~l~~~~~~~  151 (214)
                      .|+.||+|.|.|++++.+...+ .|.+............+.+++. .|+..+.|++..+..
T Consensus       103 ~G~~Hiaf~VdDi~aa~~~l~~-~G~~~~~~P~~~~~~~~~a~I~~~gd~~~~~v~r~~~~  162 (167)
T d1sqda1         103 LGVRAVAIEVEDAESAFSISVA-NGAIPSSPPIVLNEAVTIAEVKLYGDVVLRYVSYKAED  162 (167)
T ss_dssp             SEEEEEEEEESCHHHHHHHHHH-TTCCEEEEEEEETTTEEEEEEEEETTEEEEEEEECCC-
T ss_pred             CCceEEEEEeCCHHHHHHHHHH-CCCEEecCCeecCCCEEEEEEEccCCcEEEEEecCCCc
Confidence            4899999999999999999998 8998775422122334545544 488888888875543

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=94.19  E-value=0.059  Score=39.07  Aligned_cols=58  Identities=14%  Similarity=0.127  Sum_probs=44.3

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEE-CCeEEEEEecCCC
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNP  150 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~-g~~~l~l~~~~~~  150 (214)
                      .++.||+|.|.|++++.+-..+ .|.++...........+.++++. |+..+.|++..+.
T Consensus        98 ~Gi~Hiaf~VdDi~aa~~~l~~-~Ga~~~~~P~~~~~g~~~a~v~~~g~~~~~lve~~~~  156 (172)
T d1sp8a1          98 LAVRAVALRVADAEDAFRASVA-AGARPAFGPVDLGRGFRLAEVELYGDVVLRYVSYPDG  156 (172)
T ss_dssp             SEEEEEEEEESCHHHHHHHHHT-TTCCEEEEEEEEETTEEEEEEEEETTEEEEEEECCTT
T ss_pred             CceEEEEEeeCcHHHHHHHHHH-CcCEeccCCccCCCCEEEEEEECCCCcEEEEEecCCC
Confidence            5899999999999999999998 99988754222223445566654 8888899987754

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=94.13  E-value=0.095  Score=34.42  Aligned_cols=50  Identities=20%  Similarity=0.294  Sum_probs=39.7

Q ss_pred             cceEEEEEECCHHHHHHHHHh-CCCeEEeecCCceEEEEEcCCCCeEEEEee
Q 028083          162 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       162 g~~hiaf~V~dv~~~~~~l~~-~G~~~~~~~~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      ++.|+.+.|+|++++.+-+.+ .|.++..... ....++.++++..+.+.+.
T Consensus         3 ~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~~-~~~~~~~~~~~~~~~~~~~   53 (113)
T d1xqaa_           3 GIKHLNLTVADVVAAREFLEKYFGLTCSGTRG-NAFAVMRDNDGFILTLMKG   53 (113)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHCCEEEEEET-TTEEEEECTTCCEEEEEEC
T ss_pred             cccEEEEEeCCHHHHHHHHHHhhCCEEEEeec-Ccceeeeecceeeeeeeee
Confidence            578999999999999998887 6998865443 3456778888888888754

>d1xrsb1 c.23.6.1 (B:102-261) D-lysine 5,6-aminomutase beta subunit KamE, C-terminal domain {Clostridium sticklandii [TaxId: 1511]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Cobalamin (vitamin B12)-binding domain
family: Cobalamin (vitamin B12)-binding domain
domain: D-lysine 5,6-aminomutase beta subunit KamE, C-terminal domain
species: Clostridium sticklandii [TaxId: 1511]

Probab=93.38  E-value=0.0045  Score=45.54  Aligned_cols=78  Identities=12%  Similarity=0.065  Sum_probs=50.9

Q ss_pred             cccccccccEEeeeecc---ccccccccccceeeccccccceeeece--eeeeeceeeecCccCccchhhhccCCCCccc
Q 028083           10 AIPVRHQVNRLSVNFTL---TYTSSQFYQTTTVRKCRCNGQFLTTKA--KMSVEGGILKKEPIRDSDKIETATNGKHNIK   84 (214)
Q Consensus        10 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (214)
                      .+++++|+|+||||+|.   +.|..++.+  +++.+++.|    +.+  ..-.++..++++...                
T Consensus        73 ~~a~e~~~d~VglS~l~t~~~~h~~~~~~--~i~~l~~~g----~~d~v~vivGG~~~~~~~a~----------------  130 (160)
T d1xrsb1          73 KKAVELEADVLLVSQTVTQKNVHIQNMTH--LIELLEAEG----LRDRFVLLCGGPRINNEIAK----------------  130 (160)
T ss_dssp             HHHHHTTCSEEEEECCCCTTSHHHHHHHH--HHHHHHHTT----CGGGSEEEEECTTCCHHHHH----------------
T ss_pred             HHHHhcCCCEEEEeecccccchhHHHHHH--HHHHHHHcC----CCCceEEEEcCCCCCHHHHH----------------
Confidence            56889999999999994   456677777  899999988    432  223333333221100                


Q ss_pred             cCCcceeeeEeEEEEEcCCHHHHHHHHHHhc
Q 028083           85 EIRDYGVVSVHHVGILCENLERSLEFYQNIL  115 (214)
Q Consensus        85 ~~~~~~i~~i~HV~l~V~D~~~a~~FY~~~L  115 (214)
                         .   .|.|.+.-...++.+.++|+.+.+
T Consensus       131 ---~---~GaD~~f~~g~~a~~~a~~l~~~l  155 (160)
T d1xrsb1         131 ---E---LGYDAGFGPGRFADDVATFAVKTL  155 (160)
T ss_dssp             ---T---TTCSEEECTTCCHHHHHHHHHHHH
T ss_pred             ---H---cCCCEEcCCCCCHHHHHHHHHHHH
Confidence               1   355666666678888888877654

>d1ccwa_ c.23.6.1 (A:) Glutamate mutase, small subunit {Clostridium cochlearium [TaxId: 1494]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Cobalamin (vitamin B12)-binding domain
family: Cobalamin (vitamin B12)-binding domain
domain: Glutamate mutase, small subunit
species: Clostridium cochlearium [TaxId: 1494]

Probab=93.33  E-value=0.0058  Score=43.66  Aligned_cols=88  Identities=11%  Similarity=0.102  Sum_probs=57.3

Q ss_pred             cccccccccEEeeeeccccccccccccceeeccccccceeeeceeeeeeceee-ecCccCccchhhhccCCCCccccCCc
Q 028083           10 AIPVRHQVNRLSVNFTLTYTSSQFYQTTTVRKCRCNGQFLTTKAKMSVEGGIL-KKEPIRDSDKIETATNGKHNIKEIRD   88 (214)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (214)
                      .++.++++|+|++|++.+.|...+.+  +++.+|+.+    ......+.++.+ .....+.  .++            ..
T Consensus        48 ~a~~~~~~d~v~lS~~~~~~~~~~~~--~~~~l~~~~----~~~i~iivGG~~~~~~~~~~--~~~------------~~  107 (137)
T d1ccwa_          48 KAAIETKADAILVSSLYGQGEIDCKG--LRQKCDEAG----LEGILLYVGGNIVVGKQHWP--DVE------------KR  107 (137)
T ss_dssp             HHHHHHTCSEEEEEECSSTHHHHHTT--HHHHHHHTT----CTTCEEEEEESCSSSSCCHH--HHH------------HH
T ss_pred             HHHHhcCCCEEEEeeccccchHHHHH--HHHHHHHhc----cCCCEEEEeCCcCCCccccH--HHH------------HH
Confidence            46789999999999999999988887  888898887    333433444423 2211110  000            01


Q ss_pred             ceeeeEeEEEEEcCCHHHHHHHHHHhcCC
Q 028083           89 YGVVSVHHVGILCENLERSLEFYQNILGL  117 (214)
Q Consensus        89 ~~i~~i~HV~l~V~D~~~a~~FY~~~LGf  117 (214)
                      +.-.|++.|.-.-.++++..+|-++-|+.
T Consensus       108 l~~~Gv~~if~~~t~~~~~~~~l~~~l~~  136 (137)
T d1ccwa_         108 FKDMGYDRVYAPGTPPEVGIADLKKDLNI  136 (137)
T ss_dssp             HHHTTCSEECCTTCCHHHHHHHHHHHHTC
T ss_pred             HHHcCCCEEECCCCCHHHHHHHHHHHhCc
Confidence            11135666666678889999998887764

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=92.73  E-value=0.13  Score=35.42  Aligned_cols=56  Identities=16%  Similarity=0.160  Sum_probs=39.1

Q ss_pred             eeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEEE-CCeEEEEEec
Q 028083           91 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWV-GAEMIHLMEL  147 (214)
Q Consensus        91 i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~~-g~~~l~l~~~  147 (214)
                      ..++.|++|.|.|+++..+..++ .|.++...........+.+|++- ++..++|++.
T Consensus        91 ~~g~~hi~~~v~d~~~~~~~l~~-~G~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~e~  147 (149)
T d1ss4a_          91 ALGYLRVMFTVEDIDEMVSRLTK-HGAELVGEVVQYENSYRLCYIRGVEGILIGLAEE  147 (149)
T ss_dssp             SBEEEEEEEEESCHHHHHHHHHH-TTCEESSCCEEETTTEEEEEEECGGGCEEEEEEE
T ss_pred             CcceeEEEEeechhHHHHHHHHH-CCCeEccCCeECCCCeEEEEEECCCCCEEEEEEc
Confidence            36899999999999999999998 89988643211123334455543 4567777654

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=91.72  E-value=0.16  Score=36.20  Aligned_cols=56  Identities=11%  Similarity=0.040  Sum_probs=40.2

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEE-ECCeEEEEEecCC
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLW-VGAEMIHLMELPN  149 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~-~g~~~l~l~~~~~  149 (214)
                      .++.||+|.|.|++++.+.... +|.++.......+. .....++ .|+..+.+++..+
T Consensus        72 ~gv~hiaf~V~D~~~a~~~a~~-~Ga~~i~~~~~~g~-~~~~~i~g~gg~~i~Fv~~~~  128 (150)
T d1cjxa1          72 PSVCGMAFRVKDSQKAYNRALE-LGAQPIHIDTGPME-LNLPAIKGIGGAPLYLIDRFG  128 (150)
T ss_dssp             SEEEEEEEEESCHHHHHHHHHH-TTCCBCCCCCCTTC-BCCCEEECGGGCEEEEECCCS
T ss_pred             CceEEEEEEeCCHHHHHHHHHH-CCCEEcccCCCCCc-eeeeEEEcCCCCEEEEECcCC
Confidence            5899999999999999999998 99998865433322 2222233 3677778877543

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.92  E-value=0.41  Score=33.14  Aligned_cols=51  Identities=8%  Similarity=-0.014  Sum_probs=33.5

Q ss_pred             CcceEEEEEECCHHHHHHHHH-hCCCeEEeec---CC--ceEEEEEcCCCCeEEEEe
Q 028083          161 GRDRHTCIAIRDVSKLKMILD-KAGISYTLSK---SG--RPAIFTRDPDANALEFTQ  211 (214)
Q Consensus       161 ~g~~hiaf~V~dv~~~~~~l~-~~G~~~~~~~---~g--~~~~~~~DPdG~~iEl~~  211 (214)
                      .+++||+|+|.|++++.+.+. ..|.+.....   .+  ....+...-++..+++.+
T Consensus        10 ~~~dHi~i~V~Dl~~a~~fY~~~lGf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   66 (149)
T d1sqia1          10 LHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVFVLCS   66 (149)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEE
T ss_pred             eeEeEEEEEcCCHHHHHHHHhhccceEEEEEecccCCceEEEEEEecCCcEEEEEEe
Confidence            467899999999999999885 5799875321   11  223333334455566654

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=89.74  E-value=0.23  Score=33.70  Aligned_cols=56  Identities=14%  Similarity=0.247  Sum_probs=40.2

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCC-CCceEEEEEE---CCeEEEEEecC
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDK-LPYRGAWLWV---GAEMIHLMELP  148 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~-~~~~~~~l~~---g~~~l~l~~~~  148 (214)
                      .+++|+++.|.|++++.+-.++ .|.++....+..+ .....+|+..   ++..++|++.+
T Consensus        85 ~g~~Hia~~v~di~~~~~~l~~-~Gv~~~~~~~~~~~~g~~~~f~~p~dp~G~~iEl~e~p  144 (145)
T d1jc4a_          85 AGLHHMAWRVDDIDAVSATLRE-RGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQYP  144 (145)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHH-HTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEECC
T ss_pred             CcceEEEEecchHHHHHHHHHH-CCCEEeCCCceECCCCCEEEEEeccCCCCeEEEEEECC
Confidence            5899999999999999999998 8998864432222 2234455532   56788888763

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=89.19  E-value=0.63  Score=32.70  Aligned_cols=52  Identities=12%  Similarity=0.111  Sum_probs=36.9

Q ss_pred             CcceEEEEEECCHHHHHHHHHh-CCCeEEeec-----CCceEEEEEcCCCCeEEEEee
Q 028083          161 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSK-----SGRPAIFTRDPDANALEFTQV  212 (214)
Q Consensus       161 ~g~~hiaf~V~dv~~~~~~l~~-~G~~~~~~~-----~g~~~~~~~DPdG~~iEl~~~  212 (214)
                      .+++|++|.|.|++++.+.++. .|.+.....     ......++....+..++|.+.
T Consensus         6 ~~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~~~~i~l~~~   63 (163)
T d1t47a1           6 KGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSV   63 (163)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEE
T ss_pred             ceEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecCCEEEEEecc
Confidence            4789999999999999999986 799875321     123344444455666777664

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=88.40  E-value=0.7  Score=31.23  Aligned_cols=48  Identities=19%  Similarity=0.174  Sum_probs=34.0

Q ss_pred             cceEEEEEECCHHHHHHHHHh-CCCeEEeecCCceEEEEE-cCCCCeEEEEe
Q 028083          162 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTR-DPDANALEFTQ  211 (214)
Q Consensus       162 g~~hiaf~V~dv~~~~~~l~~-~G~~~~~~~~g~~~~~~~-DPdG~~iEl~~  211 (214)
                      ++.|+++.|+|++++.+-.++ .|.++.....+  .++++ |-..+.+.+.+
T Consensus         4 ~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~~~--~~~l~~~~~~~~l~l~~   53 (131)
T d1lgta1           4 SLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTDN--GDLFRIDSRAWRIAVQQ   53 (131)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEETT--EEEEESSSBSCSEEEEE
T ss_pred             cccEEEEEeCCHHHHHHHHHHhhCCceeecCCc--ceEEeecCCceEEEEec
Confidence            578999999999999999998 59988765443  23343 33344555543

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=87.63  E-value=0.36  Score=32.37  Aligned_cols=49  Identities=14%  Similarity=0.147  Sum_probs=33.7

Q ss_pred             cceEEEEEECCHHHHHHHHHhCCCeEEeecCCceEEEEEcCCCCeEEEE
Q 028083          162 RDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFT  210 (214)
Q Consensus       162 g~~hiaf~V~dv~~~~~~l~~~G~~~~~~~~g~~~~~~~DPdG~~iEl~  210 (214)
                      ++.|+++.|.|+++..+-.++.|..+.........+.+.-+++..+.+.
T Consensus         2 ri~hv~l~V~D~~~s~~FY~~Lg~~~~~~~~~~~~~~~~~~~~~~~~~~   50 (128)
T d1klla_           2 RISLFAVVVEDMAKSMEFYRKMGVEIPAEADSAPHTEAVLDGGIRLAWD   50 (128)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHTTCCCCTTGGGCSEEEEECGGGCEEEEE
T ss_pred             eEeEEEEEcCCHHHHHHHHHHhCCccccccccccceeeeccceeeeeec
Confidence            5789999999999999999888887654332223344444555555543

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=87.61  E-value=0.64  Score=33.16  Aligned_cols=31  Identities=13%  Similarity=0.149  Sum_probs=26.8

Q ss_pred             CcceEEEEEECCHHHHHHHHHh-CCCeEEeec
Q 028083          161 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSK  191 (214)
Q Consensus       161 ~g~~hiaf~V~dv~~~~~~l~~-~G~~~~~~~  191 (214)
                      .|++||++.|+|+++..+-++. .|+++....
T Consensus        11 ~Gl~HV~L~V~Dle~s~~FY~~vLG~~~~~~~   42 (170)
T d1zswa2          11 QGMGSVELTVRRLDKMASTLTEIFGYTEVSRN   42 (170)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHTTCCEEEEEC
T ss_pred             CCeeeEEEEeCCHHHHHHHHHHHhCCEEEeec
Confidence            5799999999999999999888 699887553

>d3bula2 c.23.6.1 (A:741-896) Methionine synthase, C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Cobalamin (vitamin B12)-binding domain
family: Cobalamin (vitamin B12)-binding domain
domain: Methionine synthase, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=84.47  E-value=0.053  Score=39.27  Aligned_cols=82  Identities=10%  Similarity=0.112  Sum_probs=53.9

Q ss_pred             cccccccccEEeeeeccccccccccccceeeccccccceeeeceeeeeeceeeecCccCccchhhhccCCCCccccCCcc
Q 028083           10 AIPVRHQVNRLSVNFTLTYTSSQFYQTTTVRKCRCNGQFLTTKAKMSVEGGILKKEPIRDSDKIETATNGKHNIKEIRDY   89 (214)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (214)
                      .++.+++.|+|+||++.+.|...+.+  +++.+++.+.    ..+.-+++..++++...      .        ...   
T Consensus        51 ~~~~~~~~d~i~lS~l~~~~~~~~~~--~~~~l~~~g~----~~~vivGG~~~~~~~~~------~--------~~~---  107 (156)
T d3bula2          51 RTAKEVNADLIGLSGLITPSLDEMVN--VAKEMERQGF----TIPLLIGGATTSKAHTA------V--------KIE---  107 (156)
T ss_dssp             HHHHHHTCSEEEEECCSTHHHHHHHH--HHHHHHHTTC----CSCEEEESTTCCHHHHH------H--------HTG---
T ss_pred             HHHHhhCCCEEEEecccccchHHHHH--HHHHHHhccc----cceEEEecccccchHHH------h--------hhc---
Confidence            46789999999999999999999888  8999999994    33444445434321100      0        000   


Q ss_pred             eeeeEeEEEEEcCCHHHHHHHHHHhcC
Q 028083           90 GVVSVHHVGILCENLERSLEFYQNILG  116 (214)
Q Consensus        90 ~i~~i~HV~l~V~D~~~a~~FY~~~LG  116 (214)
                        ....--.++++|..+++..=.+++.
T Consensus       108 --~~y~gad~ya~DA~~av~~a~~Ll~  132 (156)
T d3bula2         108 --QNYSGPTVYVQNASRTVGVVAALLS  132 (156)
T ss_dssp             --GGCSSCEEECCSHHHHHHHHHHHTC
T ss_pred             --cccccceeeccCHHHHHHHHHHHhC
Confidence              0011123688888888888777654

>d2g3aa1 d.108.1.1 (A:1-137) Probable acetyltransferase Atu2258 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable acetyltransferase Atu2258
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=83.90  E-value=0.94  Score=31.03  Aligned_cols=42  Identities=17%  Similarity=0.085  Sum_probs=28.5

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEE
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWL  135 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l  135 (214)
                      .++.++.+.+.|.. +..||++ +||+.....+.........||
T Consensus        92 ~g~~~i~l~~~n~~-a~~fY~k-~GF~~~g~~~~~~~~~~~~~m  133 (137)
T d2g3aa1          92 RGCMGAYIDTMNPD-ALRTYER-YGFTKIGSLGPLSSGQSITWL  133 (137)
T ss_dssp             TTCCEEEEEESCHH-HHHHHHH-HTCEEEEEECCCTTSCCEEEE
T ss_pred             cCCceEEEecccHh-hHHHHHh-CCCEEEEEECCCCCCCcEEEE
Confidence            45667788888864 7999999 999998665543333333443

>d1k4na_ d.32.1.5 (A:) Hypothetical protein YecM (EC4020) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YecM (EC4020)
domain: Hypothetical protein YecM (EC4020)
species: Escherichia coli [TaxId: 562]

Probab=82.97  E-value=6.8  Score=28.49  Aligned_cols=77  Identities=12%  Similarity=0.057  Sum_probs=51.3

Q ss_pred             eeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEE-----EEECCeEEEEEecCCCCCCCCCCCCCCcceEE
Q 028083           92 VSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAW-----LWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT  166 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~-----l~~g~~~l~l~~~~~~~~~~~~~~~g~g~~hi  166 (214)
                      ..+||+.++|.+.+.|-+|-+..+-.--.-..-.-.++--..|     +..++..+..++.+-|..-   .-...|.-||
T Consensus        42 ~~~DHialR~n~~~~A~~w~~~l~~~G~llSen~INGRPI~l~~L~~Pl~~~~~~I~ciELP~P~~k---~Yp~eGWEHI  118 (190)
T d1k4na_          42 LTADHISLRCHQNATAERWRRGFEQCGELLSENMINGRPICLFKLHEPVQVAHWQFSIVELPWPGEK---RYPHEGWEHI  118 (190)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHTTTEEEEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEECCCSS---CCSSCEEEEE
T ss_pred             ccCcEEEEeeCCHHHHHHHHHHHHHhchhhhcCeeCCeeEEEEEcCCCceeCCcEEEEEEeCCCCCC---CCCCCCceEE
Confidence            5799999999999999999999777643321111122222222     4567888888887666421   1134688999


Q ss_pred             EEEEC
Q 028083          167 CIAIR  171 (214)
Q Consensus       167 af~V~  171 (214)
                      -+-++
T Consensus       119 ElVlp  123 (190)
T d1k4na_         119 EIVLP  123 (190)
T ss_dssp             EEECC
T ss_pred             EEEec
Confidence            99998

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.37  E-value=2.5  Score=29.47  Aligned_cols=57  Identities=16%  Similarity=0.248  Sum_probs=42.8

Q ss_pred             eeeEeEEEEEcCCHHHHHHHHHHhcCCEEeeecCCCCCCceEEEEE-ECCeEEEEEecCC
Q 028083           91 VVSVHHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLW-VGAEMIHLMELPN  149 (214)
Q Consensus        91 i~~i~HV~l~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~l~-~g~~~l~l~~~~~  149 (214)
                      ..++.|+++.+.|+++..+.+++ .|.++... +..+.....+|++ .++..++|++...
T Consensus       114 ~~g~~h~~~~~~d~~~~~~~l~~-~Gv~~~~~-p~~g~~~~~~f~~DPdG~~IElvq~~~  171 (176)
T d1qipa_         114 PRGFGHIGIAVPDVYSACKRFEE-LGVKFVKK-PDDGKMKGLAFIQDPDGYWIEILNPNK  171 (176)
T ss_dssp             SCBEEEEEEECSCHHHHHHHHHH-TTCEEEEC-TTSSSSTTCEEEECTTCCEEEEECTTT
T ss_pred             ccceeEEEeeHHHHHHHHHHHHH-CCCEEeeC-CccCCceEEEEEECCCCCEEEEEeCCC
Confidence            36899999999999999999997 89988864 3333333445654 4677899987653

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=81.84  E-value=2.2  Score=28.57  Aligned_cols=31  Identities=26%  Similarity=0.254  Sum_probs=26.5

Q ss_pred             cceEEEEEECCHHHHHHHHHhC-CCeEEeecC
Q 028083          162 RDRHTCIAIRDVSKLKMILDKA-GISYTLSKS  192 (214)
Q Consensus       162 g~~hiaf~V~dv~~~~~~l~~~-G~~~~~~~~  192 (214)
                      ++.|+++.|+|++++.+-++.. |+++.....
T Consensus         4 ~L~hv~i~v~Dl~~s~~FY~~vLG~~~~~~~~   35 (132)
T d1kw3b1           4 RLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG   35 (132)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEET
T ss_pred             cccEEEEEeCCHHHHHHHHHHHhCCceecccc
Confidence            6889999999999999999984 999865443

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=80.64  E-value=1.3  Score=29.84  Aligned_cols=55  Identities=7%  Similarity=0.097  Sum_probs=33.2

Q ss_pred             eeEeEEEEEcCCHHHHHHH---HHHhcCCEEeeecCCCCCCceEEEEE-ECCeEEEEEecCC
Q 028083           92 VSVHHVGILCENLERSLEF---YQNILGLEINEARPHDKLPYRGAWLW-VGAEMIHLMELPN  149 (214)
Q Consensus        92 ~~i~HV~l~V~D~~~a~~F---Y~~~LGf~~~~~~~~~~~~~~~~~l~-~g~~~l~l~~~~~  149 (214)
                      .+++|++|.|.|.+.-.+|   ..+ .|.......  ........|+. .++..++|+....
T Consensus        76 ~~~~Hiaf~v~~~~~l~~~~~~l~~-~gv~~~~~~--~~~~~~~~yf~DPdG~~iEl~~~~~  134 (144)
T d1zswa1          76 NAITRIGLLVPSEDSLHYWKERFEK-FDVKHSEMT--TYANRPALQFEDAEGLRLVLLVSNG  134 (144)
T ss_dssp             SEEEEEEEEESCHHHHHHHHHHHHH-TTCEECCSE--EETTEEEEEEECTTCCEEEEEECTT
T ss_pred             CceeEEEEecCCchhHHHHhhhhhc-cceeeeCcc--ccCCeEEEEEECCCCCEEEEEEeCC
Confidence            4699999999995554444   444 777654321  12223334443 3577899887654