Citrus Sinensis ID: 028202

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210--
Protein Sequence
MALAASSSSSLAAKQLAGLITSSSCYTKSTASLVKLGCISPRTKRSLKVSAAVDANSMPLTGVVFQPFEEVKKEVLDVPVSPLLSLARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILLVMV
Secondary Structure (PSIPRED)
ccccccccHHHHHHHHHccccccccccccccccccccccccccccccEEEEccccccccccccccccHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccEcccccccccccccccccccccccccccccccccccEEEEEEEccccccccEEEEEccHHHHHHHHHcccccccHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccEEEc
Coil and Loop (DISEMBL)
malaasssSSLAAKQLAGlitssscytkstASLVklgcisprtkrslkvsaavdansmpltgvvfqpFEEVKkevldvpvspllsLARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQnlrggkvklhsimqppsefdhaekgdalygKFSGLTAALNHLIYSISRLKSYNVILLVMV
Flexible Loop (DISEMBL)
malaasssssLAAKQLAGLITSSSCYTKSTASLVKLGCISPRTKRSLKVSAAVDANSMPLTGVVFQPFEEVKKEVLDVPVSPLLSLARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYGKFSGLTAALNHLIYsisrlksynvILLVMV
Low Complexity Region (SEG)
MalaassssslaaKQLAGLITSSSCYTKSTASLVKLGCISPRTKRSLKVSAAVDANSMPLTGVVFQPFEEVKKEvldvpvspllslARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLakffkesseeerehaekfMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILLVMV
Disordered region (IsUnstruct)
****************AGLITSSSCYTKSTASLVKLGCISPRTKRSLKVSAAVDANSMPLTGVVFQPFEEVKKEVLDVPVSPLLSLARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFF******************************************GDALYGKFSGLTAALNHLIYSISRLKSYNVILLVM*
Disordered Region (DISOPRED)
*************************************************************GVVFQPFEEVKKEVLDVP******LA*QKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILLVMV
Disordered Region (DISEMBL)
************AKQLAGLITSSSCYTKSTASLVKLGCISPRTKRSLKVSAAVDANSMPLTGVVFQPFEEVKKEVLDVPVSPLLSLARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFK**********EKFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILLVMV
Disordered Region (DISPRO)
*******************************************KRSLKVSAAVDANSMPLTGVVFQPFEEVKKEVLDVPVSPLLSLARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILLVMV
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MALAASSSSSLAAKQLAGLITSSSCYTKSTASLVKLGCISPRTKRSLKVSAAVDANSMPLTGVVFQPFEEVKKEVLDVPVSPLLSLARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILLVMV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	212	2.2.26 [Sep-21-2011]
Q948P6	256	Ferritin-3, chloroplastic	yes	no	0.650	0.539	0.760	1e-57
Q8H1T3	259	Ferritin-2, chloroplastic	N/A	no	0.636	0.521	0.755	1e-57
Q96540	254	Ferritin-1, chloroplastic	N/A	no	0.622	0.519	0.757	2e-57
Q39101	255	Ferritin-1, chloroplastic	yes	no	0.613	0.509	0.753	6e-56
O65100	256	Ferritin-3, chloroplastic	N/A	no	0.646	0.535	0.715	7e-56
Q94FY2	250	Ferritin, chloroplastic O	N/A	no	0.811	0.688	0.586	3e-55
P19976	250	Ferritin-1, chloroplastic	no	no	0.811	0.688	0.586	3e-55
Q8RX97	251	Ferritin-1, chloroplastic	N/A	no	0.632	0.533	0.746	3e-55
Q41709	250	Ferritin-2, chloroplastic	N/A	no	0.594	0.504	0.801	4e-55
Q9S756	259	Ferritin-4, chloroplastic	no	no	0.608	0.498	0.774	7e-55

>sp|Q948P6|FRI3_SOYBN Ferritin-3, chloroplastic OS=Glycine max PE=2 SV=1

 Score =  223 bits (567), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 105/138 (76%), Positives = 116/138 (84%)

Query: 45  RSLKVSAAVDANSMPLTGVVFQPFEEVKKEVLDVPVSPLLSLARQKYEDECEAAINEQIN 104
           ++L   A  D N+ PLTGVVF+PFEEVKKE+  VP  P  SLARQKY D+CEA INEQIN
Sbjct: 39  KNLVPCATKDTNNRPLTGVVFEPFEEVKKELDLVPTVPQASLARQKYTDDCEATINEQIN 98

Query: 105 VEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSI 164
           VEYNVSYVYHA++AYFDRDN+AL+GLAKFFKESSEEEREHAEK MEYQN RGGKVKL SI
Sbjct: 99  VEYNVSYVYHAMFAYFDRDNVALKGLAKFFKESSEEEREHAEKLMEYQNKRGGKVKLQSI 158

Query: 165 MQPPSEFDHAEKGDALYG 182
           + P SEFDH EKGDALY 
Sbjct: 159 VMPLSEFDHEEKGDALYA 176

Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Has ferroxidase activity. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.
Glycine max (taxid: 3847)
EC: 1EC: .EC: 1EC: 6EC: .EC: 3EC: .EC: 1

>sp|Q8H1T3|FRI2_TOBAC Ferritin-2, chloroplastic OS=Nicotiana tabacum GN=FER2 PE=2 SV=1

 Score =  222 bits (566), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 102/135 (75%), Positives = 117/135 (86%)

Query: 47  LKVSAAVDANSMPLTGVVFQPFEEVKKEVLDVPVSPLLSLARQKYEDECEAAINEQINVE 106
           L V A+  +N+ PLTGVVF+PFEEVKKE++ VP  P +SLAR KY D+CEAA+NEQINVE
Sbjct: 44  LVVCASKGSNTKPLTGVVFEPFEEVKKELMLVPTVPQVSLARHKYSDQCEAAVNEQINVE 103

Query: 107 YNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQ 166
           YNVSYVYH +YAYFDRDN+AL+GLA+FFKESSEEER HAEK MEYQN RGGKVKL SI+ 
Sbjct: 104 YNVSYVYHGMYAYFDRDNVALKGLARFFKESSEEERGHAEKLMEYQNKRGGKVKLQSILM 163

Query: 167 PPSEFDHAEKGDALY 181
           P SEFDHAE+GDALY
Sbjct: 164 PLSEFDHAEEGDALY 178

Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Has ferroxidase activity. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.

Nicotiana tabacum (taxid: 4097)

EC: 1

EC: .

EC: 1

EC: 6

EC: .

EC: 3

EC: .

EC: 1

>sp|Q96540|FRI1_BRANA Ferritin-1, chloroplastic OS=Brassica napus GN=LSC30 PE=2 SV=1

 Score =  221 bits (564), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 100/132 (75%), Positives = 116/132 (87%)

Query: 50  SAAVDANSMPLTGVVFQPFEEVKKEVLDVPVSPLLSLARQKYEDECEAAINEQINVEYNV 109
           S+ VD N+MP+TGVVFQPFEEVKK  L +P++   SLARQ+Y D  EAAINEQINVEYNV
Sbjct: 48  SSTVDTNNMPMTGVVFQPFEEVKKADLAIPITSNASLARQRYADSSEAAINEQINVEYNV 107

Query: 110 SYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPS 169
           SYVYH++YAYFDRDN+AL+GLAKFFKESS+EEREHAEKFMEYQN RGG+V LH I+ P S
Sbjct: 108 SYVYHSMYAYFDRDNVALKGLAKFFKESSDEEREHAEKFMEYQNQRGGRVTLHPIVSPIS 167

Query: 170 EFDHAEKGDALY 181
           +F+HAEKGDALY
Sbjct: 168 DFEHAEKGDALY 179

Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Has ferroxidase activity. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.

Brassica napus (taxid: 3708)

EC: 1

EC: .

EC: 1

EC: 6

EC: .

EC: 3

EC: .

EC: 1

>sp|Q39101|FRI1_ARATH Ferritin-1, chloroplastic OS=Arabidopsis thaliana GN=FER1 PE=1 SV=1

 Score =  216 bits (551), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 98/130 (75%), Positives = 113/130 (86%)

Query: 53  VDANSMPLTGVVFQPFEEVKKEVLDVPVSPLLSLARQKYEDECEAAINEQINVEYNVSYV 112
           VD N+MP+TGVVFQPFEEVKK  L +P++   SLARQ++ D  EA INEQINVEYNVSYV
Sbjct: 52  VDTNNMPMTGVVFQPFEEVKKADLAIPITSHASLARQRFADASEAVINEQINVEYNVSYV 111

Query: 113 YHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPSEFD 172
           YH++YAYFDRDN+A++GLAKFFKESSEEER HAEKFMEYQN RGG+VKLH I+ P SEF+
Sbjct: 112 YHSMYAYFDRDNVAMKGLAKFFKESSEEERGHAEKFMEYQNQRGGRVKLHPIVSPISEFE 171

Query: 173 HAEKGDALYG 182
           HAEKGDALY 
Sbjct: 172 HAEKGDALYA 181

Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Has ferroxidase activity. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: 6

EC: .

EC: 3

EC: .

EC: 1

>sp|O65100|FRI3_VIGUN Ferritin-3, chloroplastic OS=Vigna unguiculata PE=2 SV=1

 Score =  216 bits (551), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 98/137 (71%), Positives = 118/137 (86%)

Query: 45  RSLKVSAAVDANSMPLTGVVFQPFEEVKKEVLDVPVSPLLSLARQKYEDECEAAINEQIN 104
           R+++V AA      PLTGV+F+PF+E+KK+ L VP++P +SL+RQ Y DE EAAINEQIN
Sbjct: 44  RNMRVCAAASNAPAPLTGVIFEPFQELKKDYLAVPIAPNVSLSRQNYSDEAEAAINEQIN 103

Query: 105 VEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSI 164
           VEYNVSYVYH+L+AYFDRDNIAL+GLAKFFKESSEEEREHAEK ++YQN+RGG+V LH I
Sbjct: 104 VEYNVSYVYHSLFAYFDRDNIALKGLAKFFKESSEEEREHAEKLIKYQNIRGGRVVLHPI 163

Query: 165 MQPPSEFDHAEKGDALY 181
             PPSEF+H EKGDALY
Sbjct: 164 TSPPSEFEHPEKGDALY 180

Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Has ferroxidase activity. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.

Vigna unguiculata (taxid: 3917)

EC: 1

EC: .

EC: 1

EC: 6

EC: .

EC: 3

EC: .

EC: 1

>sp|Q94FY2|FRI_MALXI Ferritin, chloroplastic OS=Malus xiaojinensis PE=3 SV=1

 Score =  214 bits (546), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 109/186 (58%), Positives = 133/186 (71%), Gaps = 14/186 (7%)

Query: 1   MALAASSSSSLAA----KQLAGLITSSSCYTKSTASLVKLGCISPRTKRSLKVSAAVDAN 56
           MALA S  S+ +       + G   + +C    +    KLG       R+L+V A+    
Sbjct: 1   MALAPSKVSTFSGFSPKPSVGGAQKNPTCSVSLSFLNEKLGS------RNLRVCAS---- 50

Query: 57  SMPLTGVVFQPFEEVKKEVLDVPVSPLLSLARQKYEDECEAAINEQINVEYNVSYVYHAL 116
           ++PLTGV+F+PFEEVKK  L VP +P +SLARQ Y DECE+AINEQINVEYN SYVYH+L
Sbjct: 51  TVPLTGVIFEPFEEVKKSELAVPTAPQVSLARQNYADECESAINEQINVEYNASYVYHSL 110

Query: 117 YAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPSEFDHAEK 176
           +AYFDRDN+AL+G AKFFKESSEEEREHAEK M+YQN RGG+V LH+I   PSEF+H EK
Sbjct: 111 FAYFDRDNVALKGFAKFFKESSEEEREHAEKLMKYQNTRGGRVVLHAIKNVPSEFEHVEK 170

Query: 177 GDALYG 182
           GDALY 
Sbjct: 171 GDALYA 176

Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Has ferroxidase activity. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.

Malus xiaojinensis (taxid: 141206)

EC: 1

EC: .

EC: 1

EC: 6

EC: .

EC: 3

EC: .

EC: 1

>sp|P19976|FRI1_SOYBN Ferritin-1, chloroplastic OS=Glycine max PE=1 SV=4

 Score =  214 bits (546), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 109/186 (58%), Positives = 132/186 (70%), Gaps = 14/186 (7%)

Query: 1   MALAASSSSSLAA----KQLAGLITSSSCYTKSTASLVKLGCISPRTKRSLKVSAAVDAN 56
           MALA S  S+ +       + G   + +C    +    KLG       R+L+V A+    
Sbjct: 1   MALAPSKVSTFSGFSPKPSVGGAQKNPTCSVSLSFLNEKLGS------RNLRVCAS---- 50

Query: 57  SMPLTGVVFQPFEEVKKEVLDVPVSPLLSLARQKYEDECEAAINEQINVEYNVSYVYHAL 116
           ++PLTGV+F+PFEEVKK  L VP +P +SLARQ Y DECE+AINEQINVEYN SYVYH+L
Sbjct: 51  TVPLTGVIFEPFEEVKKSELAVPTAPQVSLARQNYADECESAINEQINVEYNASYVYHSL 110

Query: 117 YAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPSEFDHAEK 176
           +AYFDRDN+AL+G AKFFKESSEEEREHAEK M+YQN RGG+V LH I   PSEF+H EK
Sbjct: 111 FAYFDRDNVALKGFAKFFKESSEEEREHAEKLMKYQNTRGGRVVLHPIKNAPSEFEHVEK 170

Query: 177 GDALYG 182
           GDALY 
Sbjct: 171 GDALYA 176

Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Has ferroxidase activity. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.

Glycine max (taxid: 3847)

EC: 1

EC: .

EC: 1

EC: 6

EC: .

EC: 3

EC: .

EC: 1

>sp|Q8RX97|FRI1_TOBAC Ferritin-1, chloroplastic OS=Nicotiana tabacum GN=FER1 PE=2 SV=1

 Score =  214 bits (545), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 100/134 (74%), Positives = 113/134 (84%)

Query: 49  VSAAVDANSMPLTGVVFQPFEEVKKEVLDVPVSPLLSLARQKYEDECEAAINEQINVEYN 108
           VSA+   N  PLTGVVF+PFEE+KKE++ VP  P  SL RQKY D+CEAAINEQINVEYN
Sbjct: 39  VSASKATNHKPLTGVVFEPFEELKKELMLVPAVPDTSLCRQKYSDDCEAAINEQINVEYN 98

Query: 109 VSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPP 168
            SYVYHA++AYFDRDN+AL+GLAKFFKESS EEREHAEK ME+QN RGG+VKL SI  PP
Sbjct: 99  NSYVYHAMFAYFDRDNVALKGLAKFFKESSLEEREHAEKLMEFQNKRGGRVKLLSICAPP 158

Query: 169 SEFDHAEKGDALYG 182
           +EFDH EKGDALY 
Sbjct: 159 TEFDHCEKGDALYA 172

Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Has ferroxidase activity. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.

Nicotiana tabacum (taxid: 4097)

EC: 1

EC: .

EC: 1

EC: 6

EC: .

EC: 3

EC: .

EC: 1

>sp|Q41709|FRI2_VIGUN Ferritin-2, chloroplastic OS=Vigna unguiculata GN=PFE2 PE=2 SV=2

 Score =  214 bits (545), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 101/126 (80%), Positives = 110/126 (87%)

Query: 56  NSMPLTGVVFQPFEEVKKEVLDVPVSPLLSLARQKYEDECEAAINEQINVEYNVSYVYHA 115
           N   LTGV+F+PFEEVKKE+  VP  P  SLARQKY DE EAA+NEQINVEYNVSYVYHA
Sbjct: 44  NHRALTGVIFEPFEEVKKELDLVPTVPQASLARQKYVDESEAAVNEQINVEYNVSYVYHA 103

Query: 116 LYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPSEFDHAE 175
           L+AYFDRDN+ALRGLAKFFKESSEEEREHAEK MEYQN RGGKVKL SI+ P SEFDHA+
Sbjct: 104 LFAYFDRDNVALRGLAKFFKESSEEEREHAEKLMEYQNRRGGKVKLQSIVMPLSEFDHAD 163

Query: 176 KGDALY 181
           KGDAL+
Sbjct: 164 KGDALH 169

Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Has ferroxidase activity. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.

Vigna unguiculata (taxid: 3917)

EC: 1

EC: .

EC: 1

EC: 6

EC: .

EC: 3

EC: .

EC: 1

>sp|Q9S756|FRI4_ARATH Ferritin-4, chloroplastic OS=Arabidopsis thaliana GN=FER4 PE=2 SV=1

 Score =  213 bits (542), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 103/133 (77%), Positives = 114/133 (85%), Gaps = 4/133 (3%)

Query: 50  SAAVDANSMPLTGVVFQPFEEVKKEVLDVPVSPLLSLARQKYEDECEAAINEQINVEYNV 109
           S+  DA    L+GVVF+PF+EVKKE+  VP S  LSLARQKY DECEAAINEQINVEYNV
Sbjct: 56  SSTTDA----LSGVVFEPFKEVKKELDLVPTSSHLSLARQKYSDECEAAINEQINVEYNV 111

Query: 110 SYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPS 169
           SYVYHA+YAYFDRDNIAL+GLAKFFKESS EEREHAEK MEYQN RGG+VKL SI+ P S
Sbjct: 112 SYVYHAMYAYFDRDNIALKGLAKFFKESSLEEREHAEKLMEYQNKRGGRVKLQSIVMPLS 171

Query: 170 EFDHAEKGDALYG 182
           EF+H +KGDALYG
Sbjct: 172 EFEHVDKGDALYG 184

Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Has ferroxidase activity. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: 6

EC: .

EC: 3

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	212
327187676	265	ferritin [Tamarix androssowii]	0.825	0.660	0.664	5e-58
156118336	263	ferritin [Solanum tuberosum]	0.688	0.555	0.732	3e-57
255571441	253	ferritin, plant, putative [Ricinus commu	0.716	0.600	0.660	6e-57
396075510	254	ferritin 1 [Brassica rapa subsp. pekinen	0.622	0.519	0.765	2e-56
312282781	253	unnamed protein product [Thellungiella h	0.688	0.577	0.721	3e-56
222160692	254	ferritin [Brassica juncea]	0.622	0.519	0.765	4e-56
4469288	250	ferritin [Medicago sativa]	0.830	0.704	0.609	5e-56
146160989	251	ferritin [Medicago falcata]	0.834	0.705	0.609	5e-56
351723695	256	ferritin-3, chloroplastic [Glycine max]	0.650	0.539	0.760	6e-56
89276793	265	iron-binding protein [Pyrus pyrifolia]	0.683	0.547	0.712	6e-56

>gi|327187676|dbj|BAK09173.1| ferritin [Tamarix androssowii]

 Score =  229 bits (584), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 121/182 (66%), Positives = 137/182 (75%), Gaps = 7/182 (3%)

Query: 2   ALAASSSSSLAAKQLAGLITSSSCYTKSTASLVKLGCISPRTKRSLKVSA-AVDANSMPL 60
           A AAS+ S  AA      +T +   + S    V+    SP   R L VSA A +AN+ PL
Sbjct: 6   AAAASTFSYFAATSAENQVTCAQSLSGS----VRFS--SPSNGRRLVVSASAPEANNRPL 59

Query: 61  TGVVFQPFEEVKKEVLDVPVSPLLSLARQKYEDECEAAINEQINVEYNVSYVYHALYAYF 120
           TGVVF+PFEEVKKE+  VP  P +SLARQK+ DECEAAINEQINVEYNVSYVYHA+YAYF
Sbjct: 60  TGVVFKPFEEVKKELQMVPTLPQVSLARQKFVDECEAAINEQINVEYNVSYVYHAMYAYF 119

Query: 121 DRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDAL 180
           DRDN+AL+GLAKFFKESS EEREHAEK MEYQN RGG+VKL SI+ P SEFDH EKGDAL
Sbjct: 120 DRDNVALKGLAKFFKESSLEEREHAEKLMEYQNKRGGRVKLQSIVMPLSEFDHMEKGDAL 179

Query: 181 YG 182
           Y 
Sbjct: 180 YA 181

Source: Tamarix androssowii

Species: Tamarix androssowii

Genus: Tamarix

Family: Tamaricaceae

Order: Caryophyllales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|156118336|gb|ABU49726.1| ferritin [Solanum tuberosum]

 Score =  226 bits (577), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 107/146 (73%), Positives = 123/146 (84%)

Query: 36  LGCISPRTKRSLKVSAAVDANSMPLTGVVFQPFEEVKKEVLDVPVSPLLSLARQKYEDEC 95
           L   S ++   L V A+  +NS PLTGVVF+PFEEVKKE++ VP +P  SLARQK+ D+ 
Sbjct: 32  LKIFSAKSGNGLVVCASKSSNSKPLTGVVFEPFEEVKKELMLVPTAPHASLARQKFTDQS 91

Query: 96  EAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLR 155
           EAA+NEQINVEYNVSYVYHA+YAYF RDN+AL+GLAKFFKESSEEEREHAEKFMEYQN R
Sbjct: 92  EAALNEQINVEYNVSYVYHAMYAYFGRDNVALKGLAKFFKESSEEEREHAEKFMEYQNKR 151

Query: 156 GGKVKLHSIMQPPSEFDHAEKGDALY 181
           GGKVKL SI+ P SEFDHAEKGDAL+
Sbjct: 152 GGKVKLQSILMPLSEFDHAEKGDALH 177

Source: Solanum tuberosum

Species: Solanum tuberosum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255571441|ref|XP_002526668.1| ferritin, plant, putative [Ricinus communis] gi|223533968|gb|EEF35690.1| ferritin, plant, putative [Ricinus communis]

 Score =  226 bits (575), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 107/162 (66%), Positives = 127/162 (78%), Gaps = 10/162 (6%)

Query: 30  TASLVKLGCISP---------RTKRSLK-VSAAVDANSMPLTGVVFQPFEEVKKEVLDVP 79
           T  L   G +SP         R +R+   V +A   + + LTGV+FQPFEEVKKE   VP
Sbjct: 12  TTRLRSDGVVSPTGNLCSLLQRKRRNTGIVISATAGDGLQLTGVIFQPFEEVKKEAFMVP 71

Query: 80  VSPLLSLARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSE 139
           ++P +SLARQ +EDECEAA+NEQINVEYN SYVYHAL+AYFDRDN+AL+GLAKFFKESSE
Sbjct: 72  ITPQVSLARQLFEDECEAALNEQINVEYNASYVYHALFAYFDRDNVALKGLAKFFKESSE 131

Query: 140 EEREHAEKFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALY 181
           EEREHAEK M+YQN+RGG+VKLH I+ PPSEF+H EKGDALY
Sbjct: 132 EEREHAEKLMQYQNIRGGRVKLHCIVAPPSEFEHVEKGDALY 173

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|396075510|gb|AFN81242.1| ferritin 1 [Brassica rapa subsp. pekinensis]

 Score =  224 bits (572), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 101/132 (76%), Positives = 117/132 (88%)

Query: 50  SAAVDANSMPLTGVVFQPFEEVKKEVLDVPVSPLLSLARQKYEDECEAAINEQINVEYNV 109
           S+ VD N+MP+TGVVFQPFEEVKK  L +P++   SLARQ+Y D CEAAINEQINVEYNV
Sbjct: 48  SSTVDTNNMPMTGVVFQPFEEVKKADLAIPITSNASLARQRYADSCEAAINEQINVEYNV 107

Query: 110 SYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPS 169
           SYVYH++YAYFDRDN+AL+GLAKFFKESS+EEREHAEKFMEYQN RGG+V LH I+ P S
Sbjct: 108 SYVYHSMYAYFDRDNVALKGLAKFFKESSDEEREHAEKFMEYQNKRGGRVTLHPIVSPIS 167

Query: 170 EFDHAEKGDALY 181
           +F+HAEKGDALY
Sbjct: 168 DFEHAEKGDALY 179

Source: Brassica rapa subsp. pekinensis

Species: Brassica rapa

Genus: Brassica

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|312282781|dbj|BAJ34256.1| unnamed protein product [Thellungiella halophila]

 Score =  223 bits (569), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 106/147 (72%), Positives = 123/147 (83%), Gaps = 1/147 (0%)

Query: 36  LGCISPRTKRSLKVSAA-VDANSMPLTGVVFQPFEEVKKEVLDVPVSPLLSLARQKYEDE 94
           +G     + R++ V+AA VD N+MP+TGVVFQPFEEVKK  L +P+   +SLARQ Y D 
Sbjct: 32  IGFSRKTSGRAMVVAAAPVDTNNMPMTGVVFQPFEEVKKADLAIPIKSHVSLARQGYADA 91

Query: 95  CEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNL 154
            EAAINEQINVEYNVSYVYH++YAYFDRDN+AL+GLAKFFKESSEEER HAEKFMEYQN 
Sbjct: 92  TEAAINEQINVEYNVSYVYHSMYAYFDRDNVALKGLAKFFKESSEEERGHAEKFMEYQNK 151

Query: 155 RGGKVKLHSIMQPPSEFDHAEKGDALY 181
           RGG+VKLH I+ P SEF+HAEKGDALY
Sbjct: 152 RGGRVKLHPIVSPISEFEHAEKGDALY 178

Source: Thellungiella halophila

Species: Eutrema halophilum

Genus: Eutrema

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|222160692|gb|ACM47495.1| ferritin [Brassica juncea]

 Score =  223 bits (568), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 101/132 (76%), Positives = 117/132 (88%)

Query: 50  SAAVDANSMPLTGVVFQPFEEVKKEVLDVPVSPLLSLARQKYEDECEAAINEQINVEYNV 109
           S+ VD N+MP+TGVVFQPFEEVKK  L +P++   SLARQ+Y D  EAAINEQINVEYNV
Sbjct: 48  SSTVDTNNMPMTGVVFQPFEEVKKADLAIPITSHASLARQRYADSSEAAINEQINVEYNV 107

Query: 110 SYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPS 169
           SYVYH++YAYFDRDN+AL+GLAKFFKESS+EEREHAEKFMEYQN RGG+VKLH I+ P S
Sbjct: 108 SYVYHSMYAYFDRDNVALKGLAKFFKESSDEEREHAEKFMEYQNKRGGRVKLHPIVSPVS 167

Query: 170 EFDHAEKGDALY 181
           +F+HAEKGDALY
Sbjct: 168 DFEHAEKGDALY 179

Source: Brassica juncea

Species: Brassica juncea

Genus: Brassica

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|4469288|emb|CAA65771.1| ferritin [Medicago sativa]

 Score =  223 bits (567), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 111/182 (60%), Positives = 140/182 (76%), Gaps = 6/182 (3%)

Query: 1   MALAASSSSSLAAKQLAGLITSSSCYTKSTASLVKLGCISPRTKRSLKVSAAVDANSMPL 60
           MAL+AS  S  +   + G  + ++ +  S+ +L   G      ++++KV AA       L
Sbjct: 1   MALSASKVSIFSPSPIVGHFSKNTTF--SSLNLPMDG----DKRKNVKVHAAAANAPTAL 54

Query: 61  TGVVFQPFEEVKKEVLDVPVSPLLSLARQKYEDECEAAINEQINVEYNVSYVYHALYAYF 120
           TGV+F+PFEEVKK+VL VP++  +SLARQ Y+DE E+AINEQINVEYNVSYVYH+L+AYF
Sbjct: 55  TGVIFEPFEEVKKDVLAVPIAHNVSLARQNYQDEVESAINEQINVEYNVSYVYHSLFAYF 114

Query: 121 DRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDAL 180
           DRDN+AL+GLAKFFKESSEEEREHAEK M+YQN+RGG+V LH I+ PPSEFDHAEKGDAL
Sbjct: 115 DRDNVALKGLAKFFKESSEEEREHAEKLMKYQNIRGGRVVLHPIVSPPSEFDHAEKGDAL 174

Query: 181 YG 182
           Y 
Sbjct: 175 YA 176

Source: Medicago sativa

Species: Medicago sativa

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|146160989|gb|ABQ08714.1| ferritin [Medicago falcata]

 Score =  223 bits (567), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 111/182 (60%), Positives = 139/182 (76%), Gaps = 5/182 (2%)

Query: 1   MALAASSSSSLAAKQLAGLITSSSCYTKSTASLVKLGCISPRTKRSLKVSAAVDANSMPL 60
           MAL+AS  S  +   + G  + ++ ++ S    + L     + K ++KV AA       L
Sbjct: 1   MALSASKVSIFSPSPIVGHFSKNTTFSSS----LNLPMDGDKMK-NMKVCAAAANAPTAL 55

Query: 61  TGVVFQPFEEVKKEVLDVPVSPLLSLARQKYEDECEAAINEQINVEYNVSYVYHALYAYF 120
           TGV+F+PFEEVKK+VL VP++  +SLARQ Y+DE E+AINEQINVEYNVSYVYH+L+AYF
Sbjct: 56  TGVIFEPFEEVKKDVLAVPIAHNVSLARQNYQDEVESAINEQINVEYNVSYVYHSLFAYF 115

Query: 121 DRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDAL 180
           DRDN+AL+GLAKFFKESSEEEREHAEK M+YQN+RGG+V LH I+ PPSEFDHAEKGDAL
Sbjct: 116 DRDNVALKGLAKFFKESSEEEREHAEKLMKYQNIRGGRVVLHPIVSPPSEFDHAEKGDAL 175

Query: 181 YG 182
           Y 
Sbjct: 176 YA 177

Source: Medicago falcata

Species: Medicago falcata

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351723695|ref|NP_001237032.1| ferritin-3, chloroplastic [Glycine max] gi|29839387|sp|Q948P6.1|FRI3_SOYBN RecName: Full=Ferritin-3, chloroplastic; AltName: Full=SFerH-3; Flags: Precursor gi|15487307|dbj|BAB64536.1| ferritin [Glycine max]

 Score =  223 bits (567), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 105/138 (76%), Positives = 116/138 (84%)

Query: 45  RSLKVSAAVDANSMPLTGVVFQPFEEVKKEVLDVPVSPLLSLARQKYEDECEAAINEQIN 104
           ++L   A  D N+ PLTGVVF+PFEEVKKE+  VP  P  SLARQKY D+CEA INEQIN
Sbjct: 39  KNLVPCATKDTNNRPLTGVVFEPFEEVKKELDLVPTVPQASLARQKYTDDCEATINEQIN 98

Query: 105 VEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSI 164
           VEYNVSYVYHA++AYFDRDN+AL+GLAKFFKESSEEEREHAEK MEYQN RGGKVKL SI
Sbjct: 99  VEYNVSYVYHAMFAYFDRDNVALKGLAKFFKESSEEEREHAEKLMEYQNKRGGKVKLQSI 158

Query: 165 MQPPSEFDHAEKGDALYG 182
           + P SEFDH EKGDALY 
Sbjct: 159 VMPLSEFDHEEKGDALYA 176

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|89276793|gb|ABD66595.1| iron-binding protein [Pyrus pyrifolia]

 Score =  223 bits (567), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 104/146 (71%), Positives = 122/146 (83%), Gaps = 1/146 (0%)

Query: 38  CISPRTKRSL-KVSAAVDANSMPLTGVVFQPFEEVKKEVLDVPVSPLLSLARQKYEDECE 96
            +S + +R L K + +  + ++ LTGVVFQPFEEVK +   VPVSP +SLARQ+Y DE E
Sbjct: 40  ALSFKPQRKLEKFAVSASSEAVALTGVVFQPFEEVKNDAFVVPVSPQVSLARQRYTDESE 99

Query: 97  AAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRG 156
           AA NEQINVEYNVSYVYHAL+AYFDRDN+AL+GLAKFFKESSEEEREHAEK MEYQN RG
Sbjct: 100 AATNEQINVEYNVSYVYHALFAYFDRDNVALKGLAKFFKESSEEEREHAEKLMEYQNKRG 159

Query: 157 GKVKLHSIMQPPSEFDHAEKGDALYG 182
           G+VKLHS++  P+EFDHAEKGDALY 
Sbjct: 160 GRVKLHSVIAAPTEFDHAEKGDALYA 185

Source: Pyrus pyrifolia

Species: Pyrus pyrifolia

Genus: Pyrus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	212
TAIR|locus:2149755	255	FER1 "ferretin 1" [Arabidopsis	0.759	0.631	0.518	7.8e-39
TAIR|locus:2063104	259	FER4 "ferritin 4" [Arabidopsis	0.731	0.598	0.528	1.9e-37
TAIR|locus:2078481	259	FER3 "ferritin 3" [Arabidopsis	0.882	0.722	0.463	3.5e-36
TAIR|locus:2074683	253	FER2 "ferritin 2" [Arabidopsis	0.665	0.557	0.556	9.2e-36
WB|WBGene00001500	170	ftn-1 [Caenorhabditis elegans	0.396	0.494	0.428	1.6e-13
UNIPROTKB|O16453	170	ftn-1 "Protein FTN-1" [Caenorh	0.396	0.494	0.428	1.6e-13
WB|WBGene00001501	170	ftn-2 [Caenorhabditis elegans	0.396	0.494	0.416	4.4e-13
UNIPROTKB|Q9TYS3	170	ftn-2 "Ferritin" [Caenorhabdit	0.396	0.494	0.416	4.4e-13
ZFIN|ZDB-GENE-000831-2	177	fth1a "ferritin, heavy polypep	0.533	0.638	0.350	9.1e-13
UNIPROTKB|F1NL14	209	FTH1 "Ferritin" [Gallus gallus	0.415	0.421	0.4	2.4e-12

TAIR|locus:2149755 FER1 "ferretin 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
 Identities = 85/164 (51%), Positives = 106/164 (64%)

Query:    45 RSLKVSAA-VDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQI 103
             R++ V+AA VD N+MP+TGVVFQPFEEVKK             ARQ++ D  EA INEQI
Sbjct:    43 RAVVVAAATVDTNNMPMTGVVFQPFEEVKKADLAIPITSHASLARQRFADASEAVINEQI 102

Query:   104 NVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHS 163
             NVEYNVSYVYH++YAYFDRDN+A++GL                  MEYQN RGG+VKLH 
Sbjct:   103 NVEYNVSYVYHSMYAYFDRDNVAMKGLAKFFKESSEEERGHAEKFMEYQNQRGGRVKLHP 162

Query:   164 IMQPPSEFDHAEKGDALYGKFSGLTAA--LNHLIYSISRLKSYN 205
             I+ P SEF+HAEKGDALY     L+     N  + ++ ++ S N
Sbjct:   163 IVSPISEFEHAEKGDALYAMELALSLEKLTNEKLLNVHKVASEN 206

GO:0006826 "iron ion transport" evidence=IEA;IGI;ISS

GO:0006879 "cellular iron ion homeostasis" evidence=IEA;ISS

GO:0008199 "ferric iron binding" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM;ISS;IDA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0046914 "transition metal ion binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005506 "iron ion binding" evidence=TAS

GO:0010039 "response to iron ion" evidence=IEP;RCA

GO:0042542 "response to hydrogen peroxide" evidence=IEP

GO:0009409 "response to cold" evidence=IEP

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0009617 "response to bacterium" evidence=IEP;IMP

GO:0016020 "membrane" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0000302 "response to reactive oxygen species" evidence=IGI;RCA

GO:0009908 "flower development" evidence=IGI

GO:0015979 "photosynthesis" evidence=IGI;RCA

GO:0048366 "leaf development" evidence=IGI

GO:0055072 "iron ion homeostasis" evidence=IGI;RCA

GO:0010043 "response to zinc ion" evidence=IEP

GO:0005739 "mitochondrion" evidence=IDA

TAIR|locus:2063104 FER4 "ferritin 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
 Identities = 83/157 (52%), Positives = 101/157 (64%)

Query:    51 AAVDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVS 110
             A+  + +  L+GVVF+PF+EVKKE            ARQKY DECEAAINEQINVEYNVS
Sbjct:    53 ASKSSTTDALSGVVFEPFKEVKKELDLVPTSSHLSLARQKYSDECEAAINEQINVEYNVS 112

Query:   111 YVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSE 170
             YVYHA+YAYFDRDNIAL+GL                  MEYQN RGG+VKL SI+ P SE
Sbjct:   113 YVYHAMYAYFDRDNIALKGLAKFFKESSLEEREHAEKLMEYQNKRGGRVKLQSIVMPLSE 172

Query:   171 FDHAEKGDALYGKFSGLTAA--LNHLIYSISRLKSYN 205
             F+H +KGDALYG    L+    +N  + ++  + S N
Sbjct:   173 FEHVDKGDALYGMELALSLEKLVNEKLLNLHSVASKN 209

GO:0006826 "iron ion transport" evidence=IEA;IGI;ISS

GO:0006879 "cellular iron ion homeostasis" evidence=IEA;ISS

GO:0008199 "ferric iron binding" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM;ISS;IDA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0046914 "transition metal ion binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0010039 "response to iron ion" evidence=IEP;RCA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0000302 "response to reactive oxygen species" evidence=IGI;RCA

GO:0009908 "flower development" evidence=IGI

GO:0015979 "photosynthesis" evidence=IGI;RCA

GO:0048366 "leaf development" evidence=IGI

GO:0055072 "iron ion homeostasis" evidence=IGI;RCA

GO:0005739 "mitochondrion" evidence=IDA

GO:0009793 "embryo development ending in seed dormancy" evidence=RCA

GO:0010027 "thylakoid membrane organization" evidence=RCA

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0016226 "iron-sulfur cluster assembly" evidence=RCA

GO:0048481 "ovule development" evidence=RCA

TAIR|locus:2078481 FER3 "ferritin 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 390 (142.3 bits), Expect = 3.5e-36, P = 3.5e-36
 Identities = 90/194 (46%), Positives = 112/194 (57%)

Query:    14 KQLAGLITSSSCYTKSTASLVKLGCISPRTKRSLKVSAAVDANSMPLTGVVFQPFEEVKK 73
             K ++ L +SSS  + S  S  K G +S      L+ S +    +  L+GVVF+PFEEVKK
Sbjct:    19 KDISPLFSSSSSIS-SPVSSGKSGNLS----FPLRASKSSTTTTSTLSGVVFEPFEEVKK 73

Query:    74 EXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXX 133
             E            AR  Y  ECEAA+NEQINVEYNVSYVYHALYAYFDRDN+AL+GL   
Sbjct:    74 EMDLVPSGQQLSLARHLYSPECEAAVNEQINVEYNVSYVYHALYAYFDRDNVALKGLAKF 133

Query:   134 XXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYGKFSGLTAA--L 191
                            MEYQN RGG+VKL  ++ P SEFDH EKGDALY     L+    +
Sbjct:   134 FKESSVEEREHAELLMEYQNKRGGRVKLQPMVLPQSEFDHPEKGDALYAMELALSLEKLV 193

Query:   192 NHLIYSISRLKSYN 205
             N  + ++  + S N
Sbjct:   194 NEKLLNLHSVASKN 207

GO:0006826 "iron ion transport" evidence=IEA;IGI;ISS

GO:0006879 "cellular iron ion homeostasis" evidence=IEA;ISS

GO:0008199 "ferric iron binding" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM;ISS;IDA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0046914 "transition metal ion binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0010039 "response to iron ion" evidence=IEP;RCA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0000302 "response to reactive oxygen species" evidence=IGI;RCA

GO:0009908 "flower development" evidence=IGI

GO:0015979 "photosynthesis" evidence=IGI;RCA

GO:0048366 "leaf development" evidence=IGI

GO:0055072 "iron ion homeostasis" evidence=IGI;RCA

GO:0009570 "chloroplast stroma" evidence=IDA

TAIR|locus:2074683 FER2 "ferritin 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
 Identities = 79/142 (55%), Positives = 90/142 (63%)

Query:    40 SPRTKRSLKVSAAVDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAI 99
             SP   R   V AA   N+  LTGVVF+PFEEVKKE            AR K+ D+ E+AI
Sbjct:    35 SPSGSR-FSVQAAKGTNTKSLTGVVFEPFEEVKKEMELVPTTPFVSLARHKFSDDSESAI 93

Query:   100 NEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKV 159
             N+QINVEYNVSYVYHALYAYFDRDN+ L+G                   MEYQN RGG+V
Sbjct:    94 NDQINVEYNVSYVYHALYAYFDRDNVGLKGFAKFFNDSSLEERGHAEMFMEYQNKRGGRV 153

Query:   160 KLHSIMQPPSEFDHAEKGDALY 181
             KL SI+ P SEFDH EKGDAL+
Sbjct:   154 KLQSILMPVSEFDHEEKGDALH 175

GO:0006826 "iron ion transport" evidence=IEA;ISS

GO:0006879 "cellular iron ion homeostasis" evidence=IEA;ISS

GO:0008199 "ferric iron binding" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM;ISS

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0046914 "transition metal ion binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

GO:0006979 "response to oxidative stress" evidence=IMP

GO:0000302 "response to reactive oxygen species" evidence=RCA

GO:0010039 "response to iron ion" evidence=RCA

GO:0015979 "photosynthesis" evidence=RCA

GO:0055072 "iron ion homeostasis" evidence=RCA

WB|WBGene00001500 ftn-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
 Identities = 36/84 (42%), Positives = 49/84 (58%)

Query:    87 ARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXX 146
             ARQ Y DE EAA+N+QINVE   SYVY ++ A+FDRD+IALR +                
Sbjct:     4 ARQNYHDEVEAAVNKQINVELYASYVYLSMSAHFDRDDIALRNIAKFFKEQSDEERGHAT 63

Query:   147 XXMEYQNLRGGKVKLHSIMQPPSE 170
               M  Q +RGG+V + +I +P  +
Sbjct:    64 ELMRIQAVRGGRVAMQNIQKPEKD 87

GO:0006879 "cellular iron ion homeostasis" evidence=IEA;IMP

GO:0006826 "iron ion transport" evidence=IEA

GO:0008199 "ferric iron binding" evidence=IEA

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0008340 "determination of adult lifespan" evidence=IMP

UNIPROTKB|O16453 ftn-1 "Protein FTN-1" [Caenorhabditis elegans (taxid:6239)]

 Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
 Identities = 36/84 (42%), Positives = 49/84 (58%)

Query:    87 ARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXX 146
             ARQ Y DE EAA+N+QINVE   SYVY ++ A+FDRD+IALR +                
Sbjct:     4 ARQNYHDEVEAAVNKQINVELYASYVYLSMSAHFDRDDIALRNIAKFFKEQSDEERGHAT 63

Query:   147 XXMEYQNLRGGKVKLHSIMQPPSE 170
               M  Q +RGG+V + +I +P  +
Sbjct:    64 ELMRIQAVRGGRVAMQNIQKPEKD 87

GO:0042802 "identical protein binding" evidence=IPI

GO:0005515 "protein binding" evidence=IPI

WB|WBGene00001501 ftn-2 [Caenorhabditis elegans (taxid:6239)]

 Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
 Identities = 35/84 (41%), Positives = 47/84 (55%)

Query:    87 ARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXX 146
             ARQ Y  E EAA+N+QIN+E   SYVY ++  YFDRD++AL  +                
Sbjct:     4 ARQNYHSEVEAAVNKQINIELYASYVYLSMSFYFDRDDVALPNIAKFFKEQSDEEREHAT 63

Query:   147 XXMEYQNLRGGKVKLHSIMQPPSE 170
               M  QNLRGG+V L  I +P ++
Sbjct:    64 ELMRVQNLRGGRVVLQDIQKPEND 87

GO:0006826 "iron ion transport" evidence=IEA

GO:0006879 "cellular iron ion homeostasis" evidence=IEA

GO:0008199 "ferric iron binding" evidence=IEA

UNIPROTKB|Q9TYS3 ftn-2 "Ferritin" [Caenorhabditis elegans (taxid:6239)]

 Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
 Identities = 35/84 (41%), Positives = 47/84 (55%)

Query:    87 ARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXX 146
             ARQ Y  E EAA+N+QIN+E   SYVY ++  YFDRD++AL  +                
Sbjct:     4 ARQNYHSEVEAAVNKQINIELYASYVYLSMSFYFDRDDVALPNIAKFFKEQSDEEREHAT 63

Query:   147 XXMEYQNLRGGKVKLHSIMQPPSE 170
               M  QNLRGG+V L  I +P ++
Sbjct:    64 ELMRVQNLRGGRVVLQDIQKPEND 87

GO:0042802 "identical protein binding" evidence=IPI

GO:0005515 "protein binding" evidence=IPI

ZFIN|ZDB-GENE-000831-2 fth1a "ferritin, heavy polypeptide 1a" [Danio rerio (taxid:7955)]

 Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
 Identities = 41/117 (35%), Positives = 60/117 (51%)

Query:    88 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXX 147
             RQ +E+ CEAA+N QIN+E   SYVY ++  YFDRD+ AL                    
Sbjct:     6 RQNFEEACEAAVNRQINMELYASYVYLSMSYYFDRDDQALHNFAKFFRHQSHEEREHAEK 65

Query:   148 XMEYQNLRGGKVKLHSIMQPPSEFDHAEKG-DALYGKFSGLTAALNHLIYSISRLKS 203
              M++QN RGG++ L  + +P  E D    G +AL      L  ++NH +  + +L S
Sbjct:    66 LMKFQNQRGGRIFLQDVKKP--EKDEWGSGVEALECALQ-LEKSVNHSLLELHKLAS 119

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006879 "cellular iron ion homeostasis" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0006826 "iron ion transport" evidence=IEA

GO:0008199 "ferric iron binding" evidence=IEA

GO:0046914 "transition metal ion binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|F1NL14 FTH1 "Ferritin" [Gallus gallus (taxid:9031)]

 Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
 Identities = 36/90 (40%), Positives = 48/90 (53%)

Query:    88 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXX 147
             RQ Y  +CEAAIN QIN+E   SYVY ++  YFDRD++AL+                   
Sbjct:    38 RQNYHQDCEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEK 97

Query:   148 XMEYQNLRGGKVKLHSIMQPPSEFDHAEKG 177
              M+ QN RGG++ L  I +P  + D  E G
Sbjct:    98 LMKLQNQRGGRIFLQDIKKP--DRDDWENG 125

GO:0006826 "iron ion transport" evidence=IEA

GO:0008199 "ferric iron binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0006879 "cellular iron ion homeostasis" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q39101	FRI1_ARATH	1, ., 1, 6, ., 3, ., 1	0.7538	0.6132	0.5098	yes	no
Q948P6	FRI3_SOYBN	1, ., 1, 6, ., 3, ., 1	0.7608	0.6509	0.5390	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.16.3.1	0.914
3rd Layer	1.16.3	0.921

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	212
cd01056	161	cd01056, Euk_Ferritin, eukaryotic ferritins	6e-39
cd00904	160	cd00904, Ferritin, Ferritin iron storage proteins	4e-28
cd01055	156	cd01055, Nonheme_Ferritin, nonheme-containing ferr	8e-22
pfam00210	142	pfam00210, Ferritin, Ferritin-like domain	1e-19
COG1528	167	COG1528, Ftn, Ferritin-like protein [Inorganic ion	4e-16

>gnl|CDD|153114 cd01056, Euk_Ferritin, eukaryotic ferritins

 Score =  131 bits (331), Expect = 6e-39
 Identities = 50/89 (56%), Positives = 66/89 (74%), Gaps = 4/89 (4%)

Query: 93  DECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQ 152
           +ECEAA+N+QIN+E N SYVY ++ AYFDRD++AL G AKFF++ S+EEREHAEK ++YQ
Sbjct: 2   EECEAALNKQINLELNASYVYLSMAAYFDRDDVALPGFAKFFRKLSDEEREHAEKLIKYQ 61

Query: 153 NLRGGKVKLHSIMQPPSEFDHAEKGDALY 181
           N RGG+V L  I +P    +  E G  L 
Sbjct: 62  NKRGGRVVLQDIKKP----EKDEWGSGLE 86

Eukaryotic Ferritin (Euk_Ferritin) domain. Ferritins are the primary iron storage proteins of most living organisms and members of a broad superfamily of ferritin-like diiron-carboxylate proteins. The iron-free (apoferritin) ferritin molecule is a protein shell composed of 24 protein chains arranged in 432 symmetry. Iron storage involves the uptake of iron (II) at the protein shell, its oxidation by molecular oxygen at the dinuclear ferroxidase centers, and the movement of iron (III) into the cavity for deposition as ferrihydrite; the protein shell can hold up to 4500 iron atoms. In vertebrates, two types of chains (subunits) have been characterized, H or M (fast) and L (slow), which differ in rates of iron uptake and mineralization. Fe(II) oxidation in the H/M subunits take place initially at the ferroxidase center, a carboxylate-bridged diiron center, located within the subunit four-helix bundle. In a complementary role, negatively charged residues on the protein shell inner surface of the L subunits promote ferrihydrite nucleation. Most plant ferritins combine both oxidase and nucleation functions in one chain: they have four interior glutamate residues as well as seven ferroxidase center residues. Length = 161

>gnl|CDD|153098 cd00904, Ferritin, Ferritin iron storage proteins

 Score =  103 bits (258), Expect = 4e-28
 Identities = 44/77 (57%), Positives = 61/77 (79%)

Query: 94  ECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQN 153
           + EAA+N Q+N+E   SY Y ++  YFDRD++AL+G+A FFKE ++EEREHAEKF +YQN
Sbjct: 3   KVEAAVNRQLNLELYASYTYLSMATYFDRDDVALKGVAHFFKEQAQEEREHAEKFYKYQN 62

Query: 154 LRGGKVKLHSIMQPPSE 170
            RGG+V+L  I +PPS+
Sbjct: 63  ERGGRVELQDIEKPPSD 79

Ferritins are the primary iron storage proteins of most living organisms and members of a broad superfamily of ferritin-like diiron-carboxylate proteins. The iron-free (apoferritin) ferritin molecule is a protein shell composed of 24 protein chains arranged in 432 symmetry. Iron storage involves the uptake of iron (II) at the protein shell, its oxidation by molecular oxygen at the dinuclear ferroxidase centers, and the movement of iron (III) into the cavity for deposition as ferrihydrite; the protein shell can hold up to 4500 iron atoms. In vertebrates, two types of chains (subunits) have been characterized, H or M (fast) and L (slow), which differ in rates of iron uptake and mineralization. Bacterial non-heme ferritins are composed only of H chains. Fe(II) oxidation in the H/M subunits take place initially at the ferroxidase center, a carboxylate-bridged diiron center, located within the subunit four-helix bundle. In a complementary role, negatively charged residues on the protein shell inner surface of the L subunits promote ferrihydrite nucleation. Most plant ferritins combine both oxidase and nucleation functions in one chain: they have four interior glutamate residues as well as seven ferroxidase center residues. Length = 160

>gnl|CDD|153113 cd01055, Nonheme_Ferritin, nonheme-containing ferritins

 Score = 87.2 bits (217), Expect = 8e-22
 Identities = 41/77 (53%), Positives = 55/77 (71%), Gaps = 2/77 (2%)

Query: 96  EAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLR 155
           E A+NEQIN+E   SY+Y A+ A+FD  +  L G A FF+  ++EEREHA KF +Y N R
Sbjct: 5   EKALNEQINLELYSSYLYLAMAAWFD--SKGLDGFANFFRVQAQEEREHAMKFFDYLNDR 62

Query: 156 GGKVKLHSIMQPPSEFD 172
           GG+V+L +I  PPSEF+
Sbjct: 63  GGRVELPAIEAPPSEFE 79

Nonheme Ferritin domain, found in archaea and bacteria, is a member of a broad superfamily of ferritin-like diiron-carboxylate proteins. The ferritin protein shell is composed of 24 protein subunits arranged in 432 symmetry. Each protein subunit, a four-helix bundle with a fifth short terminal helix, contains a dinuclear ferroxidase center (H type). Unique to this group of proteins is a third metal site in the ferroxidase center. Iron storage involves the uptake of iron (II) at the protein shell, its oxidation by molecular oxygen at the ferroxidase centers, and the movement of iron (III) into the cavity for deposition as ferrihydrite. Length = 156

>gnl|CDD|215791 pfam00210, Ferritin, Ferritin-like domain

 Score = 81.2 bits (201), Expect = 1e-19
 Identities = 40/105 (38%), Positives = 50/105 (47%), Gaps = 7/105 (6%)

Query: 96  EAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLR 155
             A+NEQ+  E   SY Y  +  YFD     L GLA+FF E +EEEREHA+K  E     
Sbjct: 1   IEALNEQLADELTASYQYLQMAWYFD--GPGLPGLAEFFDEQAEEEREHADKLAERILAL 58

Query: 156 GGK-----VKLHSIMQPPSEFDHAEKGDALYGKFSGLTAALNHLI 195
           GGK     V+L  I  P       E  +A       +T +L  LI
Sbjct: 59  GGKPVLTPVELLEIEPPDEFGSVLEALEAALEHEKEVTESLRELI 103

This family contains ferritins and other ferritin-like proteins such as members of the DPS family and bacterioferritins. Length = 142

>gnl|CDD|224445 COG1528, Ftn, Ferritin-like protein [Inorganic ion transport and metabolism]

 Score = 72.3 bits (178), Expect = 4e-16
 Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 2/75 (2%)

Query: 98  AINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGG 157
            +NEQ+N+E+  S +Y  + A+    + +L G AKF +  ++EE  HA K   Y N RG 
Sbjct: 9   LLNEQMNLEFYASNLYLQMAAWCS--SESLPGFAKFLRAQAQEELTHAMKLFNYLNERGA 66

Query: 158 KVKLHSIMQPPSEFD 172
           + +L +I  PP++F 
Sbjct: 67  RPELKAIEAPPNKFS 81

Length = 167

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	212
PRK15022	167	ferritin-like protein; Provisional	100.0
PRK10304	165	ferritin; Provisional	99.97
cd00904	160	Ferritin Ferritin iron storage proteins. Ferritins	99.97
COG1528	167	Ftn Ferritin-like protein [Inorganic ion transport	99.96
cd01056	161	Euk_Ferritin eukaryotic ferritins. Eukaryotic Ferr	99.96
KOG2332	178	consensus Ferritin [Inorganic ion transport and me	99.95
cd01055	156	Nonheme_Ferritin nonheme-containing ferritins. Non	99.92
PRK10635	158	bacterioferritin; Provisional	99.9
TIGR00754	157	bfr bacterioferritin. Bacterioferritin is a homomu	99.86
cd00907	153	Bacterioferritin Bacterioferritin, ferritin-like d	99.79
COG2193	157	Bfr Bacterioferritin (cytochrome b1) [Inorganic io	99.77
cd01041	134	Rubrerythrin Rubrerythrin, ferritin-like diiron-bi	99.76
PF00210	142	Ferritin: Ferritin-like domain; InterPro: IPR00833	99.71
cd01052	148	DPSL DPS-like protein, ferritin-like diiron-bindin	99.66
cd01046	123	Rubrerythrin_like rubrerythrin-like, diiron-bindin	99.58
PRK13456	186	DNA protection protein DPS; Provisional	99.02
cd01043	139	DPS DPS protein, ferritin-like diiron-binding doma	98.86
cd00657	130	Ferritin_like Ferritin-like superfamily of diiron-	98.42
cd07908	154	Mn_catalase_like Manganese catalase-like protein,	98.31
PRK09448	162	DNA starvation/stationary phase protection protein	97.71
PF02915	137	Rubrerythrin: Rubrerythrin; InterPro: IPR003251 Ru	97.47
cd01045	139	Ferritin_like_AB Uncharacterized family of ferriti	97.31
cd01051	156	Mn_catalase Manganese catalase, ferritin-like diir	96.86
cd01044	125	Ferritin_CCC1_N Ferritin-CCC1, N-terminal ferritin	96.45
COG0783	156	Dps DNA-binding ferritin-like protein (oxidative d	96.18
PF09537	111	DUF2383: Domain of unknown function (DUF2383); Int	95.48
COG1592	166	Rubrerythrin [Energy production and conversion]	95.32
COG1633	176	Uncharacterized conserved protein [Function unknow	95.3
COG2406	172	Protein distantly related to bacterial ferritins [	93.99
cd01042	165	DMQH Demethoxyubiquinone hydroxylase, ferritin-lik	93.2
TIGR02284	139	conserved hypothetical protein. Members of this pr	92.06
cd01041	134	Rubrerythrin Rubrerythrin, ferritin-like diiron-bi	89.56
cd01046	123	Rubrerythrin_like rubrerythrin-like, diiron-bindin	87.46
PF13668	137	Ferritin_2: Ferritin-like domain	87.03
PF12902	227	Ferritin-like: Ferritin-like; PDB: 3HL1_A.	85.47
PF03232	172	COQ7: Ubiquinone biosynthesis protein COQ7; InterP	84.43
cd07910	180	MiaE MiaE tRNA-modifying nonheme diiron monooxygen	83.85
PF02915	137	Rubrerythrin: Rubrerythrin; InterPro: IPR003251 Ru	82.67
COG2941	204	CAT5 Ubiquinone biosynthesis protein COQ7 [Coenzym	80.37

>PRK15022 ferritin-like protein; Provisional

Probab=100.00  E-value=4.7e-33  Score=232.14  Aligned_cols=117  Identities=15%  Similarity=0.259  Sum_probs=110.9

Q ss_pred             cccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccCCCCCC
Q 028202           90 KYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPS  169 (212)
Q Consensus        90 ~~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I~~P~~  169 (212)
                      +.+++++++||+|||.|++|||+|++||+||+  +.+|||||+||+.||+|||+||+||++|+++|||+|.+++|++|+.
T Consensus         1 m~~~~~~~~LN~QIn~E~~aSy~YLsMa~~~~--~~~L~GfA~ff~~qa~EEreHA~k~~~yl~~rGg~v~l~~I~~P~~   78 (167)
T PRK15022          1 MATAGMLLKLNSQMNLEFYASNLYLHLSEWCS--EQSLNGTATFLRAQAQSNVTQMMRMFNFMKSAGATPIVKAIDVPGE   78 (167)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCCChhHHHHHHHHHHHHHHHHHHHHHHHHHcCCceeeCCCCCCcc
Confidence            46789999999999999999999999999998  5599999999999999999999999999999999999999999999


Q ss_pred             cCccccc-cccHHHHHHHHHHHHHHHHHHHHhcCChhhhh
Q 028202          170 EFDHAEK-GDALYGKFSGLTAALNHLIYSISRLKSYNVIL  208 (212)
Q Consensus       170 e~~~~e~-~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~  208 (212)
                      +|+++.. ++..+.+|+.++..|+++...+.+++||.+.-
T Consensus        79 ~~~s~~e~fe~al~hEk~vt~~I~~L~~~A~~~~D~~t~~  118 (167)
T PRK15022         79 KLNSLEELFQKTLEEYEQRSSTLAQLADEAKALNDDSTLN  118 (167)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHhHHH
Confidence            9999865 88889999999999999999999999999864

>PRK10304 ferritin; Provisional

Probab=99.97  E-value=9.2e-32  Score=223.31  Aligned_cols=118  Identities=20%  Similarity=0.358  Sum_probs=112.1

Q ss_pred             cccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccCCCCCC
Q 028202           90 KYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPS  169 (212)
Q Consensus        90 ~~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I~~P~~  169 (212)
                      +++++++++||+|||.||+|+|+|++|++||+  +|||+|||+||+++|.|||+||+||++||++|||+|++++|++|..
T Consensus         1 ~~~~~i~~~Ln~qin~El~As~~Yl~ma~~~~--~~gl~g~A~~f~~qs~EE~~HA~kl~~~i~~rgg~~~~~~i~~p~~   78 (165)
T PRK10304          1 MLKPEMIEKLNEQMNLELYSSLLYQQMSAWCS--YHTFEGAAAFLRRHAQEEMTHMQRLFDYLTDTGNLPRINTVESPFA   78 (165)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hCCChHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeeeCCCCCCcc
Confidence            47899999999999999999999999999999  7799999999999999999999999999999999999999999999


Q ss_pred             cCccccc-cccHHHHHHHHHHHHHHHHHHHHhcCChhhhhh
Q 028202          170 EFDHAEK-GDALYGKFSGLTAALNHLIYSISRLKSYNVILL  209 (212)
Q Consensus       170 e~~~~e~-~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~  209 (212)
                      +|+++.. ++..+.+|..++..|++++..|.+++||++..+
T Consensus        79 ~~~s~~e~~~~~l~~E~~vt~~i~~l~~~A~~~~D~~t~~f  119 (165)
T PRK10304         79 EYSSLDELFQETYKHEQLITQKINELAHAAMTNQDYPTFNF  119 (165)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHhHHHH
Confidence            9999865 888899999999999999999999999998754

>cd00904 Ferritin Ferritin iron storage proteins

Probab=99.97  E-value=2.7e-31  Score=218.02  Aligned_cols=118  Identities=43%  Similarity=0.641  Sum_probs=111.6

Q ss_pred             cHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccCCCCCC-c
Q 028202           92 EDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPS-E  170 (212)
Q Consensus        92 s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I~~P~~-e  170 (212)
                      +++|+++||+|||.|++|||+|++||+||++++|||+|||+||+++|+|||+||++|++||++|||+|+++.|++|.. +
T Consensus         1 ~~~~~~~Ln~qi~~El~as~~Yl~ma~~~~~~~~~l~g~a~~f~~~s~eE~~HA~~l~~yi~~rgg~~~l~~i~~~~~~~   80 (160)
T cd00904           1 SEKVEAAVNRQLNLELYASYTYLSMATYFDRDDVALKGVAHFFKEQAQEEREHAEKFYKYQNERGGRVELQDIEKPPSDE   80 (160)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHCCCccccCcCCCCcccc
Confidence            578999999999999999999999999999999999999999999999999999999999999999999999999998 8


Q ss_pred             Cccccc-cccHHHHHHHHHHHHHHHHHHHHhcCChhhhhh
Q 028202          171 FDHAEK-GDALYGKFSGLTAALNHLIYSISRLKSYNVILL  209 (212)
Q Consensus       171 ~~~~e~-~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~  209 (212)
                      |+++.. ++..+.+|+.++..|++++..|.+++|+++...
T Consensus        81 ~~~~~e~~e~al~~Ek~v~~~i~~l~~~A~~~~D~~t~~f  120 (160)
T cd00904          81 WGGTLDAMEAALKLEKFVNQALLDLHELASEEKDPHLCDF  120 (160)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
Confidence            888754 778888999999999999999999999998764

Ferritins are the primary iron storage proteins of most living organisms and members of a broad superfamily of ferritin-like diiron-carboxylate proteins. The iron-free (apoferritin) ferritin molecule is a protein shell composed of 24 protein chains arranged in 432 symmetry. Iron storage involves the uptake of iron (II) at the protein shell, its oxidation by molecular oxygen at the dinuclear ferroxidase centers, and the movement of iron (III) into the cavity for deposition as ferrihydrite; the protein shell can hold up to 4500 iron atoms. In vertebrates, two types of chains (subunits) have been characterized, H or M (fast) and L (slow), which differ in rates of iron uptake and mineralization. Bacterial non-heme ferritins are composed only of H chains. Fe(II) oxidation in the H/M subunits take place initially at the ferroxidase center, a carboxylate-bridged diiron center, located within the subunit four-helix bundle. In a complementary rol

>COG1528 Ftn Ferritin-like protein [Inorganic ion transport and metabolism]

Probab=99.96  E-value=1.4e-29  Score=210.72  Aligned_cols=118  Identities=27%  Similarity=0.446  Sum_probs=111.6

Q ss_pred             cccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccCCCCCC
Q 028202           90 KYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPS  169 (212)
Q Consensus        90 ~~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I~~P~~  169 (212)
                      +.++++.++||+|||.||+|||+|++||+||+  ..||+|+|+||+.||+||+.||+||++|+++||++|.++.|++|+.
T Consensus         1 mls~~~~~~LN~Q~N~E~yas~lYl~maa~~~--~~~l~G~A~f~~~qa~EE~~H~~k~~~yl~~~g~~~~l~~I~~P~~   78 (167)
T COG1528           1 MLSEKMIELLNEQMNLEFYASNLYLQMAAWCS--SESLPGFAKFLRAQAQEELTHAMKLFNYLNERGARPELKAIEAPPN   78 (167)
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hcCChhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCcCCCcc
Confidence            35789999999999999999999999999999  5699999999999999999999999999999999999999999999


Q ss_pred             cCccccc-cccHHHHHHHHHHHHHHHHHHHHhcCChhhhhh
Q 028202          170 EFDHAEK-GDALYGKFSGLTAALNHLIYSISRLKSYNVILL  209 (212)
Q Consensus       170 e~~~~e~-~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~  209 (212)
                      +|+++.. +...+.+|+.++..|+++...|.++|||.|.-.
T Consensus        79 ~~~s~~e~f~~tlehEq~vt~~I~~L~~~a~~~kD~~T~nF  119 (167)
T COG1528          79 KFSSLKELFEKTLEHEQKVTSSINELAEVAREEKDYATFNF  119 (167)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchhHHHH
Confidence            9999865 888899999999999999999999999998643

>cd01056 Euk_Ferritin eukaryotic ferritins

Probab=99.96  E-value=3.1e-29  Score=205.35  Aligned_cols=119  Identities=43%  Similarity=0.657  Sum_probs=110.5

Q ss_pred             cHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccCCCCC-Cc
Q 028202           92 EDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPP-SE  170 (212)
Q Consensus        92 s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I~~P~-~e  170 (212)
                      +++|+++||+|||.|++|+|+|++||.||++.++|++|||+||+.+|+|||+||++|++||++|||+|++++|++|. ..
T Consensus         1 ~~~i~~~Ln~~i~~El~as~~Yl~~a~~~~~~~~~l~g~a~~f~~~a~eE~~HA~~l~~~i~~rgg~~~~~~i~~~~~~~   80 (161)
T cd01056           1 HEECEAALNKQINLELNASYVYLSMAAYFDRDDVALPGFAKFFRKLSDEEREHAEKLIKYQNKRGGRVVLQDIKKPEKDE   80 (161)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCCCCCcc
Confidence            46899999999999999999999999999966569999999999999999999999999999999999999999998 77


Q ss_pred             Cccccc-cccHHHHHHHHHHHHHHHHHHHHhcCChhhhhhh
Q 028202          171 FDHAEK-GDALYGKFSGLTAALNHLIYSISRLKSYNVILLV  210 (212)
Q Consensus       171 ~~~~e~-~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~~  210 (212)
                      |.++.. +.....+|+.++..|++++..|.+.+|+++..++
T Consensus        81 ~~~~~e~l~~al~~E~~vt~~~~~l~~~A~~~~D~~t~~fl  121 (161)
T cd01056          81 WGSGLEALELALDLEKLVNQSLLDLHKLASEHNDPHLADFL  121 (161)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHcCCHhHHHHH
Confidence            877754 7888999999999999999999999999997653

Eukaryotic Ferritin (Euk_Ferritin) domain. Ferritins are the primary iron storage proteins of most living organisms and members of a broad superfamily of ferritin-like diiron-carboxylate proteins. The iron-free (apoferritin) ferritin molecule is a protein shell composed of 24 protein chains arranged in 432 symmetry. Iron storage involves the uptake of iron (II) at the protein shell, its oxidation by molecular oxygen at the dinuclear ferroxidase centers, and the movement of iron (III) into the cavity for deposition as ferrihydrite; the protein shell can hold up to 4500 iron atoms. In vertebrates, two types of chains (subunits) have been characterized, H or M (fast) and L (slow), which differ in rates of iron uptake and mineralization. Fe(II) oxidation in the H/M subunits take place initially at the ferroxidase center, a carboxylate-bridged diiron center, located within the subunit four-helix bundle. In a complementary role, negatively charged r

>KOG2332 consensus Ferritin [Inorganic ion transport and metabolism]

Probab=99.95  E-value=3.5e-28  Score=204.40  Aligned_cols=122  Identities=48%  Similarity=0.708  Sum_probs=108.2

Q ss_pred             CccchhcccccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeee
Q 028202           82 PLLSLARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKL  161 (212)
Q Consensus        82 ~~~s~~Rq~~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l  161 (212)
                      .+.+++||+++++++.+||.|||.|+++||+|++|++||+|++++|+||++||.++|+||||||++||+|+|+|||+|.+
T Consensus         4 ~~~~~~r~~~~~~~~~~in~~in~el~~sy~Ylsma~yf~rd~v~l~g~~~ff~~~s~eereha~klm~~~n~rgg~i~l   83 (178)
T KOG2332|consen    4 KMSSEARQNYHDEAEAAINSQINLELNASYVYLSMAAYFDRDDVALKGFAKFFLKQSQEEREHAEKLMKTQNMRGGRIEL   83 (178)
T ss_pred             cchHHHhhcchhhccchhhhhccchhccchhhhhhhhccCccccchhhhhhhhhhhhhhhhhhHHHHHHHHHHhCCcccc
Confidence            34589999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCcCccccccccHHHHHHHHHH--HHH----HHHHHHHhcCChhhh
Q 028202          162 HSIMQPPSEFDHAEKGDALYGKFSGLTA--ALN----HLIYSISRLKSYNVI  207 (212)
Q Consensus       162 ~~I~~P~~e~~~~e~~d~l~a~E~aLt~--~In----e~i~~~~~~kD~~~~  207 (212)
                      ++|.+|..    .+|++.+.+||.++..  .+|    ++-..+.+.+|.+..
T Consensus        84 ~~i~~P~~----~ew~~~l~ale~al~LEk~vn~sLl~Lh~lA~~knD~hL~  131 (178)
T KOG2332|consen   84 QDIKKPEL----DEWGKGLEALEAALHLEKNVNQSLLELHSLATKKNDPHLC  131 (178)
T ss_pred             cccccccc----chhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHH
Confidence            99999954    5778889999999774  344    444456666787654

>cd01055 Nonheme_Ferritin nonheme-containing ferritins

Probab=99.92  E-value=7.8e-25  Score=176.62  Aligned_cols=116  Identities=41%  Similarity=0.620  Sum_probs=106.1

Q ss_pred             cHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccCCCCCCcC
Q 028202           92 EDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPSEF  171 (212)
Q Consensus        92 s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I~~P~~e~  171 (212)
                      +++|+++||+||+.|+.|+++|++||.||++  +|++||++||+++|+||++||+++++|+++|||+|++++|++|+..|
T Consensus         1 ~~~~~~~Ln~~~~~El~A~~~Yl~~a~~~~~--~~~~~~a~~f~~~a~eE~~HA~~l~~~i~~~gg~~~~~~~~~~~~~~   78 (156)
T cd01055           1 SEKLEKALNEQINLELYSSYLYLAMAAWFDS--KGLDGFANFFRVQAQEEREHAMKFFDYLNDRGGRVELPAIEAPPSEF   78 (156)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--cCChhHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeeCCCCCCCCccc
Confidence            4789999999999999999999999999995  59999999999999999999999999999999999999999998777


Q ss_pred             cccc-ccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhh
Q 028202          172 DHAE-KGDALYGKFSGLTAALNHLIYSISRLKSYNVILL  209 (212)
Q Consensus       172 ~~~e-~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~  209 (212)
                      +++. .+.....+|..++..|++++..|.+.+|+++..+
T Consensus        79 ~~~~~~l~~al~~E~~~~~~~~~l~~~A~~~~D~~~~~~  117 (156)
T cd01055          79 ESLLEVFEAALEHEQKVTESINNLVDLALEEKDYATFNF  117 (156)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHhHHHH
Confidence            7664 3666778888888899999999999999998654

Nonheme Ferritin domain, found in archaea and bacteria, is a member of a broad superfamily of ferritin-like diiron-carboxylate proteins. The ferritin protein shell is composed of 24 protein subunits arranged in 432 symmetry. Each protein subunit, a four-helix bundle with a fifth short terminal helix, contains a dinuclear ferroxidase center (H type). Unique to this group of proteins is a third metal site in the ferroxidase center. Iron storage involves the uptake of iron (II) at the protein shell, its oxidation by molecular oxygen at the ferroxidase centers, and the movement of iron (III) into the cavity for deposition as ferrihydrite.

>PRK10635 bacterioferritin; Provisional

Probab=99.90  E-value=4.5e-23  Score=170.35  Aligned_cols=118  Identities=17%  Similarity=0.062  Sum_probs=111.5

Q ss_pred             ccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccCCCCCCc
Q 028202           91 YEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPSE  170 (212)
Q Consensus        91 ~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I~~P~~e  170 (212)
                      .++++++.||++++.|+.|+++|+.||.+|+  +||+++++.+|+.+|.|||+||++|++||+++||.|+++++++|..+
T Consensus         3 ~~~~vi~~LN~~L~~El~Ai~QY~~ha~~~~--~~G~~~la~~~~~ea~eEm~HA~~l~eRIl~LgG~P~~~~~~~~~~g   80 (158)
T PRK10635          3 GDVKIINYLNKLLGNELVAINQYFLHARMFK--NWGLMRLNDVEYHESIDEMKHADKYIERILFLEGIPNLQDLGKLNIG   80 (158)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCC
Confidence            5789999999999999999999999999999  89999999999999999999999999999999999999999999988


Q ss_pred             CccccccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhhh
Q 028202          171 FDHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILLV  210 (212)
Q Consensus       171 ~~~~e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~~  210 (212)
                      .+..|++.....+|......|++++..|.+.+||+|..++
T Consensus        81 ~~v~eml~~dl~~E~~ai~~y~e~i~~a~~~~D~~s~~ll  120 (158)
T PRK10635         81 EDVEEMLRSDLRLELEGAKDLREAIAYADSVHDYVSRDMM  120 (158)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence            6666778888999999999999999999999999997664

>TIGR00754 bfr bacterioferritin

Probab=99.86  E-value=2.8e-21  Score=157.31  Aligned_cols=116  Identities=18%  Similarity=0.111  Sum_probs=107.7

Q ss_pred             cHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccCCCCCCcC
Q 028202           92 EDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPSEF  171 (212)
Q Consensus        92 s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I~~P~~e~  171 (212)
                      +++++++||+||+.|+.|+++|+.|+.||.  +|+++|++.||++++.||++||.+|.+|++++||.|.++.+++|+...
T Consensus         4 ~~~~~~~LN~~l~~E~~a~~~Y~~~~~~~~--~~~~~g~a~~~~~~a~EE~~Ha~~laeri~~lGg~p~~~~i~~~~~~~   81 (157)
T TIGR00754         4 DPDVIQHLNKQLTNELTAINQYFLHARMQK--NWGLKELADHEYHESIDEMKHADEIIERILFLEGLPNLQDLGKLRIGE   81 (157)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCcCCCCCCCC
Confidence            679999999999999999999999999996  889999999999999999999999999999999999999999998875


Q ss_pred             ccccccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhh
Q 028202          172 DHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILL  209 (212)
Q Consensus       172 ~~~e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~  209 (212)
                      +..+.+......|..++..|++++..+.+.+|+.|..+
T Consensus        82 ~~~e~l~~~l~~E~~~~~~~~e~i~~A~~~~D~~t~~l  119 (157)
T TIGR00754        82 TVREMLEADLALELDVLNRLKEAIAYAEEVRDYVSRDL  119 (157)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence            44456888888999999999999999999999998765

Bacterioferritin is a homomultimer most species. In Neisseria gonorrhoeae, Synechocystis PCC6803, Magnetospirillum magnetotacticum, and Pseudomonas aeruginosa, two types of subunit are found in a heteromultimeric complex, with each species having one member of each type. At present, both types of subunit are including in this single model.

>cd00907 Bacterioferritin Bacterioferritin, ferritin-like diiron-binding domain

Probab=99.79  E-value=1.2e-18  Score=139.56  Aligned_cols=116  Identities=22%  Similarity=0.175  Sum_probs=104.7

Q ss_pred             cHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccCCCCCCcC
Q 028202           92 EDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPSEF  171 (212)
Q Consensus        92 s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I~~P~~e~  171 (212)
                      ++++++.||++|+.|+.++++|+.++.||+  +++++|+++||+.++.||++||++|.+|++.+||.|.+..+++|..+.
T Consensus         3 ~~~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~--~~~~~~~~~~f~~~a~ee~~Ha~~lae~i~~lGg~p~~~~~~~~~~~~   80 (153)
T cd00907           3 DPKVIEALNKALTGELTAINQYFLHARMLE--DWGLEKLAERFRKESIEEMKHADKLIERILFLEGLPNLQRLGKLRIGE   80 (153)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCcCCCCCcCC
Confidence            678999999999999999999999999998  669999999999999999999999999999999999999888887765


Q ss_pred             ccccccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhh
Q 028202          172 DHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILL  209 (212)
Q Consensus       172 ~~~e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~  209 (212)
                      +..+.+......|..+...+++++..+.+.+|+.+..+
T Consensus        81 ~~~~~l~~~l~~E~~~~~~y~~~~~~A~~~~D~~t~~~  118 (153)
T cd00907          81 DVPEMLENDLALEYEAIAALNEAIALCEEVGDYVSRDL  118 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence            54455666777788888899999999999999998765

Bacterioferritins, also known as cytochrome b1, are members of a broad superfamily of ferritin-like diiron-carboxylate proteins. Similar to ferritin in architecture, Bfr forms an oligomer of 24 subunits that assembles to form a hollow sphere with 432 symmetry. Up to 12 heme cofactor groups (iron protoporphyrin IX or coproporphyrin III) are bound between dimer pairs. The role of the heme is unknown, although it may be involved in mediating iron-core reduction and iron release. Each subunit is composed of a four-helix bundle which carries a diiron ferroxidase center; it is here that initial oxidation of ferrous iron by molecular oxygen occurs, facilitating the detoxification of iron, protection against dioxygen and radical products, and storage of ferric-hydroxyphosphate at the core. Some bacterioferritins are composed of two subunit types, one conferring heme-binding ability (alpha) and the other (beta) best

>COG2193 Bfr Bacterioferritin (cytochrome b1) [Inorganic ion transport and metabolism]

Probab=99.77  E-value=3.5e-18  Score=140.35  Aligned_cols=118  Identities=19%  Similarity=0.119  Sum_probs=112.4

Q ss_pred             ccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccCCCCCCc
Q 028202           91 YEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPSE  170 (212)
Q Consensus        91 ~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I~~P~~e  170 (212)
                      ..+++++.||+++..||.|.++|+.++..+.  |||+..++++|+++|.+||.||++++++|++.+|.|+++.+.+...+
T Consensus         3 G~~~Vi~~LN~~L~~EL~ainQYflHsrM~~--~WG~~~L~~~~~~esi~Em~HAd~lieRIlfLeG~Pnlq~~~~l~iG   80 (157)
T COG2193           3 GDPKVIRLLNEALGLELAAINQYFLHSRMYK--NWGLTKLAAHEYHESIEEMKHADQLIERILFLEGLPNLQDLGKLRIG   80 (157)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--CcChHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcccccccccC
Confidence            4589999999999999999999999999999  99999999999999999999999999999999999999999999988


Q ss_pred             CccccccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhhh
Q 028202          171 FDHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILLV  210 (212)
Q Consensus       171 ~~~~e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~~  210 (212)
                      -+.+|.+....++|......+.++|..|.+.+||++..+.
T Consensus        81 ~tv~E~L~~DL~~E~~a~~~lk~~i~~~e~~~Dyvsrdl~  120 (157)
T COG2193          81 ETVKEMLEADLALEYEARDALKEAIAYCEEVQDYVSRDLL  120 (157)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHH
Confidence            8888888888999999999999999999999999998764

>cd01041 Rubrerythrin Rubrerythrin, ferritin-like diiron-binding domain

Probab=99.76  E-value=4.2e-18  Score=135.39  Aligned_cols=109  Identities=16%  Similarity=0.124  Sum_probs=95.9

Q ss_pred             HHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccCCCCCCcCccc
Q 028202           95 CEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPSEFDHA  174 (212)
Q Consensus        95 ve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I~~P~~e~~~~  174 (212)
                      ..+.||+.+..|+.++++|+.|+.|++  ++|++|+|+||+.++.+|+.||.+|++|++++||.|.     .|+..|++.
T Consensus         2 t~~~L~~a~~~E~~a~~~Y~~~a~~a~--~~g~~~~a~~f~~~a~eE~~HA~~~~~~l~~l~g~~~-----~~~~~~~~~   74 (134)
T cd01041           2 TEKNLLAAFAGESQARNRYTYFAEKAR--KEGYEQIARLFRATAENEKEHAKGHFKLLKGLGGGDT-----GPPIGIGDT   74 (134)
T ss_pred             hHHHHHHHHHhHHHHHHHHHHHHHHHH--HCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc-----CCCCCcchH
Confidence            457899999999999999999999999  5699999999999999999999999999999999999     566666655


Q ss_pred             -cccccHHHHHHH-HHHHHHHHHHHHHhcCChhhhhhh
Q 028202          175 -EKGDALYGKFSG-LTAALNHLIYSISRLKSYNVILLV  210 (212)
Q Consensus       175 -e~~d~l~a~E~a-Lt~~Ine~i~~~~~~kD~~~~~~~  210 (212)
                       +.+.....+|.. .+..|++++..|.+++|+++..++
T Consensus        75 ~~~l~~~~~~E~~e~~~~y~~~~~~A~~e~d~~~~~~f  112 (134)
T cd01041          75 LENLKAAIAGETYEYTEMYPEFAEVAEEEGFKEAARSF  112 (134)
T ss_pred             HHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence             346667778875 668999999999999999987654

Rubrerythrin domain is a nonheme iron binding domain found in many air-sensitive bacteria and archaea and member of a broad superfamily of ferritin-like diiron-carboxylate proteins. The homodimeric rubrerythrin protein contains a binuclear metal center located within a four helix bundle. Many, but not all, rubrerythrin proteins have a second domain with a rubredoxin-like hexacoordinated iron center. Rubrerythrin is thought to reduce hydrogen peroxide as part of an oxidative stress protection system but its function is still poorly understood.

>PF00210 Ferritin: Ferritin-like domain; InterPro: IPR008331 Ferritin is one of the major non-haem iron storage proteins in animals, plants, and microorganisms []

Probab=99.71  E-value=4.7e-17  Score=126.04  Aligned_cols=112  Identities=29%  Similarity=0.391  Sum_probs=95.2

Q ss_pred             HHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeecc-----CCCCCCc
Q 028202           96 EAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHS-----IMQPPSE  170 (212)
Q Consensus        96 e~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~-----I~~P~~e  170 (212)
                      +++||++++.|+.++++|+.++.+|+  +.+++|+++||+++++||++|++++.+|++.|||.|....     ++.|+. 
T Consensus         1 i~~Ln~~l~~e~~~~~~y~~~~~~~~--~~~~~~l~~~~~~~a~e~~~h~~~l~e~i~~lgg~p~~~~~~~~~~~~~~~-   77 (142)
T PF00210_consen    1 IEALNEQLALELQASQQYLNMHWNFD--GPNFPGLAKFFQDQAEEEREHADELAERILMLGGKPSGSPVEIPEIPKPPE-   77 (142)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHH--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS-SSTSHHHHHHHHSSSS-
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHhc--CCCchhhHHHhHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHhhhhhcccc-
Confidence            57899999999999999999999999  6799999999999999999999999999999999655544     566655 


Q ss_pred             Cccc-cccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhhh
Q 028202          171 FDHA-EKGDALYGKFSGLTAALNHLIYSISRLKSYNVILLV  210 (212)
Q Consensus       171 ~~~~-e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~~  210 (212)
                      |.++ +.+......|..+...+++++..|.+.+|+.+.-++
T Consensus        78 ~~~~~~~l~~~l~~e~~~~~~~~~l~~~a~~~~D~~t~~~~  118 (142)
T PF00210_consen   78 WTDPREALEAALEDEKEIIEEYRELIKLAEKEGDPETADFL  118 (142)
T ss_dssp             SSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSHHHHHHH
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence            4444 336666777777778999999999999999987553

It consists of a mineral core of hydrated ferric oxide, and a multi-subunit protein shell that encloses the former and assures its solubility in an aqueous environment. In animals the protein is mainly cytoplasmic and there are generally two or more genes that encode closely related subunits - in mammals there are two subunits which are known as H(eavy) and L(ight). In plants ferritin is found in the chloroplast []. This entry represents the main structural domain of ferritin. The domain is also found in other ferritin-like proteins such as members of the DNA protection during starvation (DPS) family and bacterioferritins.; GO: 0008199 ferric iron binding, 0006879 cellular iron ion homeostasis; PDB: 1N1Q_C 4DYU_E 2YJJ_D 2YJK_B 2VXX_B 3FVB_A 2WLU_A 2XGW_A 2WLA_A 1Z4A_D ....

>cd01052 DPSL DPS-like protein, ferritin-like diiron-binding domain

Probab=99.66  E-value=1.1e-15  Score=121.64  Aligned_cols=116  Identities=19%  Similarity=0.084  Sum_probs=97.3

Q ss_pred             cHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccC-------
Q 028202           92 EDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSI-------  164 (212)
Q Consensus        92 s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I-------  164 (212)
                      .+++++.||++++.|+.++++|+.++.++.  ++++.++++||++++.||++||+++.+|++.+||+|.....       
T Consensus         4 ~~~~~~~Ln~~la~e~~~~~~y~~~~~~~~--g~~f~~l~~~~~~~~~ee~~Had~laEri~~lGg~p~~~~~~~~~~~~   81 (148)
T cd01052           4 VDELIELLNKAFADEWLAYYYYTILAKHVK--GPEGEGIKEELEEAAEEELNHAELLAERIYELGGTPPRDPKDWYEISG   81 (148)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChHHHHHHhc
Confidence            357899999999999999999999999999  66899999999999999999999999999999999998553       


Q ss_pred             ---CCCCCcCcc-ccccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhhh
Q 028202          165 ---MQPPSEFDH-AEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILLV  210 (212)
Q Consensus       165 ---~~P~~e~~~-~e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~~  210 (212)
                         +.|...+.+ .+.+......|..+...+++++..+.+ +|+.|..++
T Consensus        82 ~~~~~~~~~~~~~~~~l~~~~~~e~~~i~~~~~~~~~a~~-~D~~t~~ll  130 (148)
T cd01052          82 CKCGYLPPDPPDVKGILKVNLKAERCAIKVYKELCDMTHG-KDPVTYDLA  130 (148)
T ss_pred             ccccCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CChHHHHHH
Confidence               333333323 344677777888888899999998865 999887653

DPSL (DPS-like). DPSL is a phylogenetically distinct class within the ferritin-like superfamily, and similar in many ways to the DPS (DNA Protecting protein under Starved conditions) proteins. Like DPS, these proteins are expressed in response to oxidative stress, form dodecameric cage-like particles, preferentially utilize hydrogen peroxide in the controlled oxidation of iron, and possess a short N-terminal extension implicated in stabilizing cellular DNA. This domain is a member of a broad superfamily of ferritin-like diiron-carboxylate proteins. These proteins are distantly related to bacterial ferritins which assemble 24 monomers, each of which have a four-helix bundle with a fifth shorter helix at the C terminus and a diiron (ferroxidase) center. Ferritins contain a center where oxidation of ferrous iron by molecular oxygen occurs, facilitating the detoxification of iron, protection against dioxygen and radical

>cd01046 Rubrerythrin_like rubrerythrin-like, diiron-binding domain

Probab=99.58  E-value=1.5e-14  Score=114.36  Aligned_cols=100  Identities=17%  Similarity=0.115  Sum_probs=85.5

Q ss_pred             HHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccCCCCCCcCccc
Q 028202           95 CEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPSEFDHA  174 (212)
Q Consensus        95 ve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I~~P~~e~~~~  174 (212)
                      +++.||.|++.|++++++|+.|+.|++  ..|++|+|+||+.++.+|+.||+++.+++   |+      |+     -+..
T Consensus         2 ~~~~L~~a~~~E~~a~~~Y~~~a~~a~--~eG~~~~A~~f~~~a~eE~~HA~~~~~~l---~~------i~-----~~~~   65 (123)
T cd01046           2 LEEDLEANFKGETTEVGMYLAMARVAQ--REGYPEVAEELKRIAMEEAEHAARFAELL---GK------VS-----EDTK   65 (123)
T ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHHHH--HCCCHHHHHHHHHHHHHHHHHHHHHHHHH---hc------Cc-----ccHH
Confidence            678999999999999999999999999  55999999999999999999999999976   22      21     1223


Q ss_pred             cccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhhh
Q 028202          175 EKGDALYGKFSGLTAALNHLIYSISRLKSYNVILLV  210 (212)
Q Consensus       175 e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~~  210 (212)
                      +.+.....+|...+..|++++..|+++||+.+..+.
T Consensus        66 ~~le~a~~~E~~~~~~~~~~~~~A~~egd~~~~~~~  101 (123)
T cd01046          66 ENLEMMLEGEAGANEGKKDAATEAKAEGLDEAHDFF  101 (123)
T ss_pred             HHHHHHHHhHHHHHHhHHHHHHHHHHcCCHHHHHHH
Confidence            446677888888888999999999999999987653

Rubrerythrin-like domain, similar to rubrerythrin, a nonheme iron binding domain found in many air-sensitive bacteria and archaea, and member of a broad superfamily of ferritin-like diiron-carboxylate proteins. Rubrerythrin is thought to reduce hydrogen peroxide as part of an oxidative stress protection system. The rubrerythrin protein has two domains, a binuclear metal center located within a four-helix bundle of the rubrerythrin domain, and a rubredoxin domain. The Rubrerythrin-like domains in this CD are singular domains (no C-terminus rubredoxin domain) and are phylogenetically distinct from rubrerythrin domains of rubrerythrin-rubredoxin proteins.

>PRK13456 DNA protection protein DPS; Provisional

Probab=99.02  E-value=3.9e-09  Score=89.86  Aligned_cols=115  Identities=17%  Similarity=0.101  Sum_probs=88.4

Q ss_pred             cHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccCC--C-CC
Q 028202           92 EDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIM--Q-PP  168 (212)
Q Consensus        92 s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I~--~-P~  168 (212)
                      .+++++.||+.+..|+.+.|+|..+++...  .+--++++.||.+...||+.||+.+.++|.+.||.|.+.+-+  . -.
T Consensus        18 ~~~li~lLn~AlA~E~~a~~~Y~~~a~~~~--G~~~e~V~e~le~a~~EEl~HA~~lAeRI~qLGG~P~~~p~~~~~ls~   95 (186)
T PRK13456         18 VDKLVELLVKNAAAEFTTYYYYTILRAHLI--GLEGEGLKEIAEDARLEDRNHFEALVPRIYELGGKLPRDIREFHDISA   95 (186)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--CcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChHHHhhhhc
Confidence            368999999999999999999999999999  666789999999999999999999999999999999886652  0 00


Q ss_pred             CcC-ccccc-cccHHHHHHHHH------HHHHHHHHHHHhcCChhhhhh
Q 028202          169 SEF-DHAEK-GDALYGKFSGLT------AALNHLIYSISRLKSYNVILL  209 (212)
Q Consensus       169 ~e~-~~~e~-~d~l~a~E~aLt------~~Ine~i~~~~~~kD~~~~~~  209 (212)
                      ..+ .-++. .+....+|..|.      ..|+++++.+. .+|.+|--+
T Consensus        96 ~~~~~~p~d~tdv~~mL~~~L~AEr~AI~~Y~eii~~~~-~kDp~T~~l  143 (186)
T PRK13456         96 CPDAYLPENPTDPKEILKVLLEAERCAIRTYTEICDMTA-GKDPRTYDL  143 (186)
T ss_pred             CccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCccHHHH
Confidence            000 00111 133444555554      57899999998 678887544

>cd01043 DPS DPS protein, ferritin-like diiron-binding domain

Probab=98.86  E-value=1.7e-08  Score=80.17  Aligned_cols=111  Identities=19%  Similarity=0.155  Sum_probs=93.1

Q ss_pred             HHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeecc--------CCCCC-
Q 028202           98 AINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHS--------IMQPP-  168 (212)
Q Consensus        98 aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~--------I~~P~-  168 (212)
                      .||..+..++..+..|....-+-.  ++++..+..+|.+.++++++|+..+.+++...||.|....        ++.++ 
T Consensus         2 ~Ln~~lA~~~~~~~~~~~~HW~v~--G~~f~~lh~~l~e~~~~~~~~~D~lAERi~~lgg~P~~~~~~~~~~s~l~~~~~   79 (139)
T cd01043           2 ALNQLLADLYVLYLKLKNYHWNVK--GPNFFALHELFEELYDELREAIDEIAERIRALGGKPLGTLKEYAELSTIKEEPA   79 (139)
T ss_pred             HHHHHHHHHHHHHHHHhCCCcCcc--CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHhHCCCCCCCC
Confidence            588888999988888887776666  7799999999999999999999999999999999999874        66665 


Q ss_pred             CcCccccccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhhh
Q 028202          169 SEFDHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILLV  210 (212)
Q Consensus       169 ~e~~~~e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~~  210 (212)
                      ..++..+........+..+...+++++..|.+.+|++|..+.
T Consensus        80 ~~~~~~~~l~~~~~~~~~~i~~~~~~i~~a~~~~D~~t~~ll  121 (139)
T cd01043          80 GVLSAKEMVAELLEDYETLIEELREAIELADEAGDPATADLL  121 (139)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence            455555556666777777778999999999999999987653

DPS (DNA Protecting protein under Starved conditions) domain is a member of a broad superfamily of ferritin-like diiron-carboxylate proteins. Some DPS proteins nonspecifically bind DNA, protecting it from cleavage caused by reactive oxygen species such as the hydroxyl radicals produced during oxidation of Fe(II) by hydrogen peroxide. These proteins assemble into dodecameric structures, some form DPS-DNA co-crystalline complexes, and possess iron and H2O2 detoxification capabilities. Expression of DPS is induced by oxidative or nutritional stress, including metal ion starvation. Members of the DPS family are homopolymers formed by 12 four-helix bundle subunits that assemble with 23 symmetry into a hollow shell. The DPS ferroxidase site is unusual in that it is not located in a four-helix bundle as in ferritin, but is shared by 2-fold symmetry-related subunits providing the iron ligands. Many DPS sequences (e.g., E. coli) disp

>cd00657 Ferritin_like Ferritin-like superfamily of diiron-containing four-helix-bundle proteins

Probab=98.42  E-value=3.4e-06  Score=61.57  Aligned_cols=61  Identities=28%  Similarity=0.310  Sum_probs=56.2

Q ss_pred             HHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeecc
Q 028202           98 AINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHS  163 (212)
Q Consensus        98 aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~  163 (212)
                      +||..+..|+.+.+.|..++..++     .+++..+|...+.+|+.|++.|.+++..+|+.+....
T Consensus         2 ~L~~~~~~E~~a~~~y~~~~~~~~-----~~~~~~~~~~~a~~E~~H~~~l~~~~~~~g~~~~~~~   62 (130)
T cd00657           2 LLNDALAGEYAAIIAYGQLAARAP-----DPDLKDELLEIADEERRHADALAERLRELGGTPPLPP   62 (130)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCH
Confidence            689999999999999999999876     6889999999999999999999999999999987553

Ferritin-like, diiron-carboxylate proteins participate in a range of functions including iron regulation, mono-oxygenation, and reactive radical production. These proteins are characterized by the fact that they catalyze dioxygen-dependent oxidation-hydroxylation reactions within diiron centers; one exception is manganese catalase, which catalyzes peroxide-dependent oxidation-reduction within a dimanganese center. Diiron-carboxylate proteins are further characterized by the presence of duplicate metal ligands, glutamates and histidines (ExxH) and two additional glutamates within a four-helix bundle. Outside of these conserved residues there is little obvious homology. Members include bacterioferritin, ferritin, rubrerythrin, aromatic and alkene monooxygenase hydroxylases (AAMH), ribonucleotide reductase R2 (RNRR2), acyl-ACP-desaturases (Acyl_ACP_Desat), manganese (Mn) catalases, demethoxyub

>cd07908 Mn_catalase_like Manganese catalase-like protein, ferritin-like diiron-binding domain

Probab=98.31  E-value=1.1e-05  Score=65.19  Aligned_cols=69  Identities=14%  Similarity=0.086  Sum_probs=61.8

Q ss_pred             ccHHHHHHHHHhhh---hhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeec
Q 028202           91 YEDECEAAINEQIN---VEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLH  162 (212)
Q Consensus        91 ~s~eve~aLNeQIn---~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~  162 (212)
                      -+++.-..|++|+.   .|+.+..+|+..+.-..  . +.+.+++.|...+.+|++|++.|.+++..+||.+.+.
T Consensus        10 ~~~~~~~~~~~~~~g~~~E~~ai~~Y~y~~~~~~--~-~~~~~k~~f~~lA~eE~~H~~~l~~~i~~lgg~p~~~   81 (154)
T cd07908          10 PNPRYAELLLDDYAGTNSELTAISQYIYQHLISE--E-KYPEIAETFLGIAIVEMHHLEILGQLIVLLGGDPRYR   81 (154)
T ss_pred             CChHHHHHHHHHhCCcchHHHHHHHHHHHHHHcc--C-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcch
Confidence            45677888899888   99999999999998776  3 6899999999999999999999999999999988754

This uncharacterized bacterial protein family has a ferritin-like domain similar to that of the manganese catalase protein of Lactobacillus plantarum and the bll3758 protein of Bradyrhizobium japonicum. Ferritin-like, diiron-carboxylate proteins participate in a range of functions including iron regulation, mono-oxygenation, and reactive radical production. These proteins are characterized by the fact that they catalyze dioxygen-dependent oxidation-hydroxylation reactions within diiron centers; one exception is manganese catalase, which catalyzes peroxide-dependent oxidation-reduction within a dimanganese center. Diiron-carboxylate proteins are further characterized by the presence of duplicate metal ligands, glutamates and histidines (ExxH) and two additional glutamates within a four-helix bundle. Outside of these conserved residues there is little obvious homology. Members include bacterio

>PRK09448 DNA starvation/stationary phase protection protein Dps; Provisional

Probab=97.71  E-value=0.0006  Score=56.64  Aligned_cols=113  Identities=10%  Similarity=0.103  Sum_probs=81.4

Q ss_pred             cHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeee--------cc
Q 028202           92 EDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKL--------HS  163 (212)
Q Consensus        92 s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l--------~~  163 (212)
                      .+++.+.||..+..++.....|..+.-+-.  ...+..+..+|.+++.++++|+..+-+++...||.|.-        ..
T Consensus        20 ~~~~~~~Ln~~LA~~~~l~~k~~~~hW~v~--G~~f~~lH~~lee~~~~~~~~~D~iAERi~~lGg~p~~t~~e~~~~s~   97 (162)
T PRK09448         20 KKATIELLNQQLAQFIDLSLITKQAHWNMK--GANFIAVHEMLDGFRTALEDHLDTMAERAVQLGGVALGTTQVVASKTP   97 (162)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhhhcc--CCCHHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCCCCCHHHHHHhCC
Confidence            356889999999999998888887776555  45888999999999999999999999999999998753        34


Q ss_pred             CCC-CCCcCccccccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhh
Q 028202          164 IMQ-PPSEFDHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILL  209 (212)
Q Consensus       164 I~~-P~~e~~~~e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~  209 (212)
                      |+. |...++..+....+..--..+...+++.+   .+++|+.|.-+
T Consensus        98 i~e~~~~~~~~~~~l~~l~~d~~~~~~~~r~~i---~e~~D~~T~dl  141 (162)
T PRK09448         98 LKSYPLDIHNVQDHLKALADRYAIVANDVRKAI---DEAGDEDTADI  141 (162)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH---hhcCChhHHHH
Confidence            544 44433333222222222223334556666   77889988654

>PF02915 Rubrerythrin: Rubrerythrin; InterPro: IPR003251 Rubrerythrin (Rr), found in anaerobic sulphate-reducing bacteria [], is a fusion protein containing an N-terminal diiron-binding domain and a C-terminal domain homologous to rubredoxin []

Probab=97.47  E-value=0.0019  Score=49.29  Aligned_cols=62  Identities=21%  Similarity=0.286  Sum_probs=56.0

Q ss_pred             HHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeee
Q 028202           97 AAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKL  161 (212)
Q Consensus        97 ~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l  161 (212)
                      +.|+..|..|..+...|..++.-+..+  | |.+.+.|+..|.+|.+|+..|.+.+..+++....
T Consensus         1 e~L~~A~~~E~~~~~~Y~~~a~~~~~~--~-p~~~~~f~~lA~~E~~H~~~~~~l~~~~~~~~~~   62 (137)
T PF02915_consen    1 EILEMAIKMELEAAKFYRELAEKAKDE--G-PELKELFRRLAEEEQEHAKFLEKLLRKLGPGEEP   62 (137)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHT--T-HHHHHHHHHHHHHHHHHHHHHHHHHCHCSTTHHT
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhhhc--c-cHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCc
Confidence            468889999999999999999999954  7 9999999999999999999999999999876544

The physiological role of Rr has not been identified. The 3-D structure of Desulphovibrio vulgaris rubrerythrin has been solved []. The structure reveals a tetramer of two-domain subunits. In each monomer, the N-terminal 146 residues form a four-alpha-helix bundle containing the diiron-oxo site (centre I), and the C-terminal 45 residues form a rubredoxin-like FeS4 domain.; GO: 0016491 oxidoreductase activity, 0046872 metal ion binding, 0055114 oxidation-reduction process; PDB: 1VJX_A 2FZF_A 3SID_B 3QHC_B 3QHB_B 4DI0_A 1J30_B 1YV1_A 1YUZ_B 1YUX_B ....

>cd01045 Ferritin_like_AB Uncharacterized family of ferritin-like proteins found in archaea and bacteria

Probab=97.31  E-value=0.0011  Score=50.59  Aligned_cols=55  Identities=29%  Similarity=0.317  Sum_probs=50.7

Q ss_pred             HHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 028202           97 AAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRG  156 (212)
Q Consensus        97 ~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RG  156 (212)
                      +.||..|..|..+...|...+..++.     +++..+|...+.+|+.|++.|.+.+..+|
T Consensus         1 ~~l~~a~~~E~~~~~~Y~~~a~~~~~-----~~~~~~~~~la~eE~~H~~~l~~~~~~~~   55 (139)
T cd01045           1 EILALAIKMEEEAAEFYLELAEKAKD-----PELKKLFEELAEEEKEHAERLEELYEKLF   55 (139)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhHCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            36899999999999999999998772     38999999999999999999999999987

Ferritin-like domain found in archaea and bacteria (Ferritin_like_AB). This uncharacterized domain is a member of a broad superfamily of ferritin-like diiron-carboxylate proteins whose function is unknown. This family includes unknown or hypothetical proteins which were sequenced from mostly anaerobic or microaerophilic metal-metabolizing and/or nitrogen-fixing microbes. The family includes sequences from ferric-, sulfate-, and arsenic-reducing bacteria, Geobacter, Magnetospirillum, Desulfovibrio, and Desulfitobacterium. Also included are several nitrogen-fixing endosymbiotic bacteria, Rhizobium, Mesorhizobium, and Bradyrhizobium; also phototrophic purple nonsulfur bacteria, Rhodobacter and Rhodopseudomonas, as well as, obligate thermophiles, Thermotoga, Thermoanaerobacter, and Pyrococcus. The conserved residues of a diiron center are present in this uncharacterized domain.

>cd01051 Mn_catalase Manganese catalase, ferritin-like diiron-binding domain

Probab=96.86  E-value=0.026  Score=46.73  Aligned_cols=62  Identities=15%  Similarity=0.070  Sum_probs=51.8

Q ss_pred             HHHHHHHHHhh---hhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCe
Q 028202           93 DECEAAINEQI---NVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGK  158 (212)
Q Consensus        93 ~eve~aLNeQI---n~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~  158 (212)
                      +..-..|.+|+   +-|+.+..+|+..+.-++    ..+.+...|...+.||+.|++.|-+.+...||.
T Consensus        19 p~~A~~l~~~~gG~~gEl~ai~qYl~q~~~~~----~~~~~~d~l~~ia~eEm~H~e~la~~I~~Lg~~   83 (156)
T cd01051          19 PRFAKLLQEQLGGAFGELSAAMQYLFQSFNFR----EDPKYRDLLLDIGTEELSHLEMVATLIAMLLKD   83 (156)
T ss_pred             HHHHHHHHHHhCCccHHHHHHHHHHHHHhhcC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            33444444444   469999999999999884    358999999999999999999999999999983

Manganese (Mn) catalase is a member of a broad superfamily of ferritin-like diiron enzymes. While many diiron enzymes catalyze dioxygen-dependent reactions, manganese catalase performs peroxide-dependent oxidation-reduction. Catalases are important antioxidant metalloenzymes that catalyze disproportionation of hydrogen peroxide, forming dioxygen and water. Manganese catalase, a nonheme type II catalase, contains a binuclear manganese cluster that catalyzes the redox dismutation of hydrogen peroxide, interconverting between dimanganese(II) [(2,2)] and dimanganese(III) [(3,3)] oxidation states during turnover. Mn catalases are found in a broad range of microorganisms in microaerophilic environments, including the mesophilic lactic acid bacteria (e.g., Lactobacillus plantarum) and bacterial and archaeal thermophiles (e.g., Thermus thermophilus and Pyrobaculum caldifontis). L. plantarum and T. thermophilus holoenz

>cd01044 Ferritin_CCC1_N Ferritin-CCC1, N-terminal ferritin-like diiron-binding domain

Probab=96.45  E-value=0.013  Score=46.00  Aligned_cols=58  Identities=19%  Similarity=0.184  Sum_probs=52.0

Q ss_pred             HHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeee
Q 028202           98 AINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVK  160 (212)
Q Consensus        98 aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~  160 (212)
                      .+|+.++.|..+..+|..++....     =+...+.|...|++|++|++-|-+++..+|+.+.
T Consensus         2 ~~~~~~~~E~~~~~~Y~~la~~~~-----~~~~k~~f~~lA~~E~~H~~~~~~~~~~~~~~~~   59 (125)
T cd01044           2 RLRKFQKDEITEAAIYRKLAKREK-----DPENREILLKLAEDERRHAEFWKKFLGKRGVPPP   59 (125)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcC-----CHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC
Confidence            478899999999999999999876     2458999999999999999999999999998774

Ferritin-like N-terminal domain present in an uncharacterized family of proteins found in bacteria and archaea. These proteins also have a C-terminal CCC1-like transmembrane domain and are thought to be involved in iron and/or manganese transport. This domain has the conserved residues of a diiron center found in other ferritin-like proteins.

>COG0783 Dps DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism]

Probab=96.18  E-value=0.088  Score=43.91  Aligned_cols=115  Identities=21%  Similarity=0.198  Sum_probs=77.0

Q ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeee--------eccC
Q 028202           93 DECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVK--------LHSI  164 (212)
Q Consensus        93 ~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~--------l~~I  164 (212)
                      .++.+.||+++..=+.....++ -..| .=..-.+--+-.+|.++.+|-.+|..-+-++++..||.|.        +..|
T Consensus        14 ~~~~~~Ln~~lAd~~~Ly~k~~-~~HW-nV~G~~F~~lHe~~ee~y~el~~~~DeiAERi~~LGg~p~~t~~~~~~~s~i   91 (156)
T COG0783          14 KKIAEALNQLLADLYVLYLKTH-NYHW-NVKGPNFFALHEKLEELYEELAEHVDEIAERIRALGGVPLGTLSEYLKLSSI   91 (156)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHh-hccc-ceeCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcccHHHHHHhCCC
Confidence            6788889987644322222211 1112 2123345567899999999999999999999999999875        4445


Q ss_pred             CCCCCcCccccccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhh
Q 028202          165 MQPPSEFDHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILL  209 (212)
Q Consensus       165 ~~P~~e~~~~e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~  209 (212)
                      +..+.+++..+....+..--..+...+++.+..+.+.+|.+|.-+
T Consensus        92 ke~~~~~~~~~~l~~l~~~~~~l~~~~r~~~~~a~e~gD~~Tadl  136 (156)
T COG0783          92 KEEPGDYTAREMLKELVEDYEYLIKELRKGIELADEAGDEVTADL  136 (156)
T ss_pred             cccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCChhHHHH
Confidence            555544444444444444444555688999999999999998754

>PF09537 DUF2383: Domain of unknown function (DUF2383); InterPro: IPR019052 This entry represents a functionally uncharacterised ferritin like domain

Probab=95.48  E-value=0.11  Score=39.65  Aligned_cols=64  Identities=20%  Similarity=0.216  Sum_probs=53.4

Q ss_pred             HHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeec
Q 028202           94 ECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLH  162 (212)
Q Consensus        94 eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~  162 (212)
                      ++++.||+.|.....+...|-..+--++  +   +.+..+|.+.+.+...|+..|-.++...||.|.-.
T Consensus         1 ~~i~~Ln~Ll~~~~d~~~~Y~~a~~~~~--~---~~lk~~f~~~~~~~~~~~~~L~~~i~~~Gg~p~~~   64 (111)
T PF09537_consen    1 ETIEALNDLLKGLHDGIEGYEKAAEKAE--D---PELKSLFQEFAQERQQHAEELQAEIQELGGEPEES   64 (111)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHH----S---HHHHHHHHHHHHHHHHHHHHHHHHHHHTT--H---
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHCC--C---HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCcc
Confidence            4688999999999999999999998877  2   78889999999999999999999999999988543

; PDB: 3FSE_B.

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=95.32  E-value=0.069  Score=45.10  Aligned_cols=61  Identities=16%  Similarity=0.209  Sum_probs=54.1

Q ss_pred             HHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 028202           94 ECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRG  156 (212)
Q Consensus        94 eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RG  156 (212)
                      +.++-|-+...-|=.+...|+.||...++.  |++.+|+.|+..+.+|..||..+.+.+.+.+
T Consensus         4 ~t~~~L~~aF~GEs~a~~rY~~~A~~A~~e--G~~~va~lfr~iA~~E~~HA~~~~~~l~~~~   64 (166)
T COG1592           4 ETEENLRKAFAGESMAVMRYLIFAKVAEEE--GYPEIARLFRAIAEAEAVHAKNHLKLLGKLL   64 (166)
T ss_pred             hHHHHHHHHhcchHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence            456667777788889999999999999976  9999999999999999999999999887755

>COG1633 Uncharacterized conserved protein [Function unknown]

Probab=95.30  E-value=0.19  Score=42.55  Aligned_cols=64  Identities=22%  Similarity=0.252  Sum_probs=58.0

Q ss_pred             ccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCee
Q 028202           91 YEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKV  159 (212)
Q Consensus        91 ~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V  159 (212)
                      -...++++|+..|..|..|...|..++..+++.     -+.+.|..-+.+||+|..+|-+.+.++++..
T Consensus        21 ~~~~~~e~L~~Ai~~E~eA~~fY~~lae~~~~~-----~~rk~~~~la~eE~~H~~~f~~l~~~~~~~~   84 (176)
T COG1633          21 KELSIEELLAIAIRGELEAIKFYEELAERIEDE-----EIRKLFEDLADEEMRHLRKFEKLLEKLTPKE   84 (176)
T ss_pred             hhccHHHHHHHHHHHHHHHHHHHHHHHHhcCCH-----hHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence            345789999999999999999999999999853     6889999999999999999999999998876

>COG2406 Protein distantly related to bacterial ferritins [General function prediction only]

Probab=93.99  E-value=0.95  Score=38.05  Aligned_cols=114  Identities=20%  Similarity=0.197  Sum_probs=70.9

Q ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCee-----eeccC---
Q 028202           93 DECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKV-----KLHSI---  164 (212)
Q Consensus        93 ~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V-----~l~~I---  164 (212)
                      +++++.|-..-..|+.+.|-|..+..-..  ...=.|.-.|....-.|-+.|++.+.+++.+.||.+     .|..|   
T Consensus        16 ~kli~~Llka~AaE~tt~YYYtilr~~l~--Gle~e~~keiae~Ar~E~r~H~e~i~~Ri~elg~~~Prd~~~l~dISgC   93 (172)
T COG2406          16 DKLIELLLKAAAAEWTTYYYYTILRYALK--GLEGEGIKEIAEEAREEDRKHFELIAPRIYELGGDLPRDMKKLHDISGC   93 (172)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHh--ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHhhcCC
Confidence            46677777777889999999998887665  223345667777777788999999999999999974     23333   


Q ss_pred             CCCC--CcCcc-ccccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhh
Q 028202          165 MQPP--SEFDH-AEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILL  209 (212)
Q Consensus       165 ~~P~--~e~~~-~e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~  209 (212)
                      +.|.  .++.+ .++..++-.-|.--...++++. ++..-+|+.|-+|
T Consensus        94 ~~a~LPedp~D~~~~l~vlv~AE~CAir~ykeic-~~T~GkDprTyeL  140 (172)
T COG2406          94 KPAYLPEDPYDIDEILAVLVKAERCAIRAYKEIC-NLTAGKDPRTYEL  140 (172)
T ss_pred             CCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHH-ccccCCCcchHHH
Confidence            2222  12222 2233333333333333444433 3345568877665

>cd01042 DMQH Demethoxyubiquinone hydroxylase, ferritin-like diiron-binding domain

Probab=93.20  E-value=0.48  Score=39.84  Aligned_cols=95  Identities=16%  Similarity=0.101  Sum_probs=72.2

Q ss_pred             hhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccCCCCC---CcC--------cc
Q 028202          105 VEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPP---SEF--------DH  173 (212)
Q Consensus       105 ~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I~~P~---~e~--------~~  173 (212)
                      -|+.|..+|....+.+.     .+.+..++++...+|.+|-..|=+.+..+|++|.+-.   |.   ..|        -.
T Consensus        11 GE~gA~~IY~gQ~~~~~-----~~~~~~~l~~~~~~E~~Hl~~f~~~i~~~~~rps~l~---PlW~~~gf~lG~~tal~G   82 (165)
T cd01042          11 GEVGAVRIYRGQLAVAR-----DPAVRPLIKEMLDEEKDHLAWFEELLPELGVRPSLLL---PLWYVAGFALGALTALLG   82 (165)
T ss_pred             chHHHHHHHHHHHHHhC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCchHH---HHHHHHHHHHHHHHHhhC
Confidence            58899999999998876     3899999999999999999999999999999987643   10   000        01


Q ss_pred             ccc-cccHHHHHHHHHHHHHHHHHHHHhcCChhhh
Q 028202          174 AEK-GDALYGKFSGLTAALNHLIYSISRLKSYNVI  207 (212)
Q Consensus       174 ~e~-~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~  207 (212)
                      +++ .-...+.|..+...|++-+..+...+|-.+.
T Consensus        83 ~~~a~~~~~avE~~V~~Hy~~ql~~L~~~~d~~l~  117 (165)
T cd01042          83 KKAAMACTAAVETVVEEHYNDQLRELPAQPDKELR  117 (165)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhhccCCHHHH
Confidence            122 3446778888888898888888765565443

Demethoxyubiquinone hydroxylases (DMQH) are members of the ferritin-like, diiron-carboxylate family which are present in eukaryotes (the CLK-1/CAT5 family) and prokaryotes (the Coq7 family). DMQH participates in one of the last steps of ubiquinone biosysnthesis and is responsible for DMQ hydroxylation, resulting in the formation of hydroxyubiquinone, a precursor of ubiquinone. CLK-1 is a mitochondrial inner membrane protein and Coq7 is a proposed interfacial integral membrane protein. Mutations in the Caenorhabditis elegans gene clk-1 affect biological timing and extend longevity. The conserved residues of a diiron center are present in this domain.

>TIGR02284 conserved hypothetical protein

Probab=92.06  E-value=0.59  Score=37.77  Aligned_cols=61  Identities=15%  Similarity=0.152  Sum_probs=55.3

Q ss_pred             HHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeee
Q 028202           96 EAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKL  161 (212)
Q Consensus        96 e~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l  161 (212)
                      ++.||+.|...+.+..-|-..+...+     -+.+..+|.+.+.+-..|+..|-.++...||.|.-
T Consensus         2 i~~Ln~Lie~~~D~~~gY~~aae~v~-----~~~lk~~f~~~~~~~~~~~~eL~~~v~~lGg~p~~   62 (139)
T TIGR02284         2 IHSLNDLIEISIDGKDGFEESAEEVK-----DPELATLFRRIAGEKSAIVSELQQVVASLGGKPED   62 (139)
T ss_pred             hHHHHHHHHHcccHHHHHHHHHHHCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence            57899999999999999999887654     47889999999999999999999999999998753

Members of this protein family are found mostly in the Proteobacteria, although one member is found in the the marine planctomycete Pirellula sp. strain 1. The function is unknown.

>cd01041 Rubrerythrin Rubrerythrin, ferritin-like diiron-binding domain

Probab=89.56  E-value=3.7  Score=32.27  Aligned_cols=60  Identities=17%  Similarity=0.258  Sum_probs=52.3

Q ss_pred             HHHHHHHHHhhhhhhH-HHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 028202           93 DECEAAINEQINVEYN-VSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNL  154 (212)
Q Consensus        93 ~eve~aLNeQIn~El~-ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~  154 (212)
                      ..+...|..-+..|.. +.-.|..++..+...  +....+.||..-..+|.+|+..|-+.+..
T Consensus        72 ~~~~~~l~~~~~~E~~e~~~~y~~~~~~A~~e--~d~~~~~~f~~i~~~E~~H~~~l~~~l~~  132 (134)
T cd01041          72 GDTLENLKAAIAGETYEYTEMYPEFAEVAEEE--GFKEAARSFEAIAEAEKVHAERYKKALEN  132 (134)
T ss_pred             chHHHHHHHHHHhhHHHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            3677888889999986 779999999999955  99999999999999999999998776643

Rubrerythrin domain is a nonheme iron binding domain found in many air-sensitive bacteria and archaea and member of a broad superfamily of ferritin-like diiron-carboxylate proteins. The homodimeric rubrerythrin protein contains a binuclear metal center located within a four helix bundle. Many, but not all, rubrerythrin proteins have a second domain with a rubredoxin-like hexacoordinated iron center. Rubrerythrin is thought to reduce hydrogen peroxide as part of an oxidative stress protection system but its function is still poorly understood.

>cd01046 Rubrerythrin_like rubrerythrin-like, diiron-binding domain

Probab=87.46  E-value=2.7  Score=32.92  Aligned_cols=59  Identities=12%  Similarity=0.181  Sum_probs=53.1

Q ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 028202           93 DECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQN  153 (212)
Q Consensus        93 ~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln  153 (212)
                      +.+.+.|..-+..|...+-.|..+...+...  |....+.||+.....|.+|+.++-+.+.
T Consensus        62 ~~~~~~le~a~~~E~~~~~~~~~~~~~A~~e--gd~~~~~~~~~~~~~E~~H~~~~~~~l~  120 (123)
T cd01046          62 EDTKENLEMMLEGEAGANEGKKDAATEAKAE--GLDEAHDFFHEAAKDEARHGKMLKGLLE  120 (123)
T ss_pred             ccHHHHHHHHHHhHHHHHHhHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            5678888889999999999999999999955  9999999999999999999999877654

Rubrerythrin-like domain, similar to rubrerythrin, a nonheme iron binding domain found in many air-sensitive bacteria and archaea, and member of a broad superfamily of ferritin-like diiron-carboxylate proteins. Rubrerythrin is thought to reduce hydrogen peroxide as part of an oxidative stress protection system. The rubrerythrin protein has two domains, a binuclear metal center located within a four-helix bundle of the rubrerythrin domain, and a rubredoxin domain. The Rubrerythrin-like domains in this CD are singular domains (no C-terminus rubredoxin domain) and are phylogenetically distinct from rubrerythrin domains of rubrerythrin-rubredoxin proteins.

>PF13668 Ferritin_2: Ferritin-like domain

Probab=87.03  E-value=11  Score=29.35  Aligned_cols=95  Identities=17%  Similarity=0.159  Sum_probs=61.1

Q ss_pred             HHHHHHhhhhhhHHHHHHHHHHHhhccC---CccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccCCCCCCcC-
Q 028202           96 EAAINEQINVEYNVSYVYHALYAYFDRD---NIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPSEF-  171 (212)
Q Consensus        96 e~aLNeQIn~El~ASy~YlsMAayFdrd---nvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I~~P~~e~-  171 (212)
                      .+.||-.++.|+.....|..-..-+..+   ..-=+..-.+|+.-...|+.|...|-+.+.  |+.+.    +.|..+| 
T Consensus         3 ~~iL~~Al~lE~l~~~fY~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~E~~H~~~l~~~l~--g~~~~----~~~~~~~~   76 (137)
T PF13668_consen    3 LDILNFALNLEYLEADFYQQAAEGFTLQDNKAALDPEVRDLFQEIADQEQGHVDFLQAALE--GGRPV----PPPAYDFP   76 (137)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCChhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCCC----CCCccccc
Confidence            3678999999999999999877643210   112345678888889999999999998887  66653    3333333 


Q ss_pred             ----cccc-ccccHHHHHHHHHHHHHHHHH
Q 028202          172 ----DHAE-KGDALYGKFSGLTAALNHLIY  196 (212)
Q Consensus       172 ----~~~e-~~d~l~a~E~aLt~~Ine~i~  196 (212)
                          +++. .......+|......++..+.
T Consensus        77 ~~~~~~~~~~L~~A~~~E~~~~~~Y~g~~~  106 (137)
T PF13668_consen   77 FDPFTDDASFLRLAYTLEDVGVSAYKGAAP  106 (137)
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                2222 234445555555555554444

>PF12902 Ferritin-like: Ferritin-like; PDB: 3HL1_A

Probab=85.47  E-value=3.9  Score=35.87  Aligned_cols=63  Identities=17%  Similarity=0.172  Sum_probs=44.4

Q ss_pred             HHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeecc
Q 028202           99 INEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHS  163 (212)
Q Consensus        99 LNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~  163 (212)
                      |...|.+|+...-.||..+.--+..  .-...+.-.+.-+.|||-|....-+-++-.||.|.+.+
T Consensus         1 Lq~Ai~lE~atip~YL~a~ySi~~~--~~~~~~~~i~~V~~eEMlHl~l~~Nll~alGg~P~l~~   63 (227)
T PF12902_consen    1 LQQAIELELATIPPYLTALYSIKPG--TNEEARNLIRSVAIEEMLHLSLAANLLNALGGSPRLTS   63 (227)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHHBS-T--TSH-HHHHHHHHHHHHHHHHHHHHHHHHHTT-------
T ss_pred             CcHHHHHHHHHHHHHHHHHcccCCC--cchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcccc
Confidence            4567899999999999665544422  22338889999999999999999999999999998873

>PF03232 COQ7: Ubiquinone biosynthesis protein COQ7; InterPro: IPR011566 Coq7 (also known as Clk-1) is a di-iron carboxylate protein occuring in both prokaryotes and eukaryotes that is essential for ubiquinone biosynthesis [, ]

Probab=84.43  E-value=3.4  Score=34.92  Aligned_cols=97  Identities=16%  Similarity=0.098  Sum_probs=72.9

Q ss_pred             hhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccCCCCCC-----------cCc
Q 028202          104 NVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPS-----------EFD  172 (212)
Q Consensus       104 n~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I~~P~~-----------e~~  172 (212)
                      .-|+-|..+|..-...+..    .+....++++..++|.+|-..|-+.+..+|.+|.+-   .|.-           ..-
T Consensus        12 AGE~~A~~iY~gQ~~~~~~----~~~~~~~l~~~~~~E~~Hl~~f~~~l~~~~~RpS~l---~Plw~~~g~~LG~~tal~   84 (172)
T PF03232_consen   12 AGEVGAVRIYRGQLAVARR----DPELRPFLKEMAEEEKDHLAWFEQLLPELRVRPSLL---NPLWYVAGFALGALTALL   84 (172)
T ss_pred             HHHHHHHHHHHHHHHHHCC----CHHHHHHHHHHHHHHHHHHHHHHHHhHHcCCCCcHH---HHHHHHHHHHHHHHHHhh
Confidence            5689999999998888773    789999999999999999999999999999987553   2210           000


Q ss_pred             cccc-cccHHHHHHHHHHHHHHHHHHHHh---cCChhhh
Q 028202          173 HAEK-GDALYGKFSGLTAALNHLIYSISR---LKSYNVI  207 (212)
Q Consensus       173 ~~e~-~d~l~a~E~aLt~~Ine~i~~~~~---~kD~~~~  207 (212)
                      -.++ .....+.|..+...|++-|..+..   ..|-.+.
T Consensus        85 G~~~~~a~t~avE~~V~~Hy~~Ql~~L~~~~~~~d~~l~  123 (172)
T PF03232_consen   85 GDKAAMACTAAVETVVEEHYNDQLRELPAMGEEEDPELR  123 (172)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHH
Confidence            0111 344678888888899999999985   4454443

It has been implicated in the aging process as mutations in the Caenorhabditis elegans gene lead to increased lifespan []. Coq7 is a membrane-bound protein that functions as a monooxygenase to hydroxylate demethoxyubiquinone (2-methoxy-5-methyl-6-polyprenyl-1,4-benzoquinone) in the penultimate step of ubiquinone biosynthesis []. Biochemical studies indicate that NADH can serve directly as a reductant for catalytic activation of dioxygen and substrate oxidation by the enzyme, with no requirement for an additional reductase protein component []. This direct reaction with NADH is so far unique amongst members of the di-iron carboxylate protein family. This entry is specific for the bacterial Coq7 proteins.; GO: 0006744 ubiquinone biosynthetic process, 0055114 oxidation-reduction process

>cd07910 MiaE MiaE tRNA-modifying nonheme diiron monooxygenase, ferritin-like diiron-binding domain

Probab=83.85  E-value=8.6  Score=33.01  Aligned_cols=68  Identities=15%  Similarity=0.158  Sum_probs=54.4

Q ss_pred             HHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccCCCC
Q 028202           94 ECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQP  167 (212)
Q Consensus        94 eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I~~P  167 (212)
                      .....|-++-+-|.-|+..=++|=.-+.    ..+++..-+-.-+.||++|-++.++.|.+||.  .++++.++
T Consensus        18 nl~~iL~DHA~CE~KAA~~A~~L~~rY~----~~~~Lv~~m~~LarEEL~HFeqV~~im~~Rgi--~l~~~~~~   85 (180)
T cd07910          18 NLDEILIDHAHCEKKAASSAMSLIFRYP----EKPELVEAMSDLAREELQHFEQVLKIMKKRGI--PLGPDSKD   85 (180)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHcC----CcHhHHHHHHHHHHHHHHHHHHHHHHHHHcCC--CCCCCCCC
Confidence            5667788899999999988665533333    35888889999999999999999999999995  55555555

MiaE is a nonheme diiron monooxygenase that catalyzes the posttranscriptional allylic hydroxylation of a modified nucleoside in tRNA called 2-methylthio-N-6-isopentenyl adenosine (ms2i6A). ms2i6A is found at position 37, next to the anticodon at the 3' position in almost all eukaryotic and bacterial tRNA's that read codons beginning with uridine. The miaE gene is absent in Escherichia coli, a finding consistent with the absence of the hydroxylated derivative of ms2i6A in this species.

>PF02915 Rubrerythrin: Rubrerythrin; InterPro: IPR003251 Rubrerythrin (Rr), found in anaerobic sulphate-reducing bacteria [], is a fusion protein containing an N-terminal diiron-binding domain and a C-terminal domain homologous to rubredoxin []

Probab=82.67  E-value=7.9  Score=29.07  Aligned_cols=52  Identities=25%  Similarity=0.304  Sum_probs=46.4

Q ss_pred             HHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHH
Q 028202           94 ECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFME  150 (212)
Q Consensus        94 eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLie  150 (212)
                      ....+|.-.+..|-.+.-.|..++..+.     -+...++|...+.+|.+|...|-+
T Consensus        84 ~~~~~l~~a~~~E~~~~~~Y~~~a~~~~-----~~~~~~~~~~l~~~E~~H~~~l~~  135 (137)
T PF02915_consen   84 NLEEALEMAIKEEKDAYEFYAELARKAP-----DPEIRKLFEELAKEEKEHEDLLEK  135 (137)
T ss_dssp             HHHHHHHHHHHHHHTHHHHHHHHHHHTT-----SHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCC-----CHHHHHHHHHHHHHHHHHHHHHHH
Confidence            6789999999999999999999998765     477889999999999999998864

The physiological role of Rr has not been identified. The 3-D structure of Desulphovibrio vulgaris rubrerythrin has been solved []. The structure reveals a tetramer of two-domain subunits. In each monomer, the N-terminal 146 residues form a four-alpha-helix bundle containing the diiron-oxo site (centre I), and the C-terminal 45 residues form a rubredoxin-like FeS4 domain.; GO: 0016491 oxidoreductase activity, 0046872 metal ion binding, 0055114 oxidation-reduction process; PDB: 1VJX_A 2FZF_A 3SID_B 3QHC_B 3QHB_B 4DI0_A 1J30_B 1YV1_A 1YUZ_B 1YUX_B ....

>COG2941 CAT5 Ubiquinone biosynthesis protein COQ7 [Coenzyme metabolism]

Probab=80.37  E-value=8.9  Score=33.39  Aligned_cols=116  Identities=14%  Similarity=0.087  Sum_probs=73.4

Q ss_pred             CCCCccchhcccccHHHHHHHHHhh----hhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 028202           79 PVSPLLSLARQKYEDECEAAINEQI----NVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNL  154 (212)
Q Consensus        79 ~~~~~~s~~Rq~~s~eve~aLNeQI----n~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~  154 (212)
                      |..|.....|..+++.=-..+...|    .-|+-|-++|..-+++....+   +..  -.++..+||-.|--.|-+++++
T Consensus        22 ~~~~~~a~~rpdlS~~d~~~~~~iiRVnhaGE~~A~~iY~GQ~~~~r~~~---~R~--~l~em~d~E~~HL~~f~~~l~e   96 (204)
T COG2941          22 PTRPRPAMPRPDLSDADKRILAGIIRVNHAGELGAQAIYQGQAAVARSPE---PRI--QLKEMADEEIDHLAWFEQRLLE   96 (204)
T ss_pred             CCCCCCCCCCCCcCcHHHHHHHHhhhccchhHHHHHHHHhhHHHHHcCcc---hHH--HHHHHHHHHHHHHHHHHHHHHH
Confidence            3444444555556665444444333    359999999999998887542   222  7899999999999999999999


Q ss_pred             cCCeeeeccC---------CCCCCcCccccc-cccHHHHHHHHHHHHHHHHHHHHh
Q 028202          155 RGGKVKLHSI---------MQPPSEFDHAEK-GDALYGKFSGLTAALNHLIYSISR  200 (212)
Q Consensus       155 RGG~V~l~~I---------~~P~~e~~~~e~-~d~l~a~E~aLt~~Ine~i~~~~~  200 (212)
                      ++.+|.+-.-         .+-. ..-.+.+ .-...+.|..+...|++-++.+..
T Consensus        97 ~~vRPsll~P~W~~~~FalGA~a-~Llgdk~am~~teavE~vIe~Hy~~ql~~L~~  151 (204)
T COG2941          97 LGVRPSLLNPLWYAAAFALGAGA-GLLGDKAAMGFTEAVETVIEKHYDGQLRELPN  151 (204)
T ss_pred             ccCCccHHHHHHHHHHHHHHHHH-hhcccHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            9999876420         0000 0000111 233566777777777666666543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	212
3a9q_A	212	Crystal Structure Analysis Of E173a Variant Of The		2e-39
3a68_A	212	Crystal Structure Of Plant Ferritin Reveals A Novel		3e-39
3vnx_A	204	Crystal Structure Of Ferritin From Multicellular Gr		9e-25
3ka8_A	176	Frog M-Ferritin, Eqh Mutant, With Cobalt Length = 1		4e-13
3ka9_A	176	Frog M-Ferritin, Eeh Mutant, With Cobalt Length = 1		4e-13
1mfr_A	176	Crystal Structure Of M Ferritin Length = 176		4e-13
3ka6_A	176	Frog M-Ferritin, Eed Mutant, With Cobalt Length = 1		4e-13
3sh6_A	176	Frog M-Ferritin, D122r Mutant, With Magnesium Lengt		4e-13
3shx_A	176	Frog M-Ferritin With Magnesium, L134p Mutant Length		4e-13
3se1_A	176	Frog M-Ferritin With Magnesium, R72d Mutant Length		3e-12
1rcc_A	173	Bullfrog Red Cell L Ferritin TartrateMGPH 5.5 Lengt		9e-12
1rcd_A	173	Bullfrog Red Cell L Ferritin TartrateMGPH 5.5 Lengt		1e-11
3es3_A	183	Directing Noble Metal Ion Chemistry Within A Design		2e-11
2z6m_A	176	Crystal Structure Of Human Ferritin H8 As Biotempla		3e-11
3erz_A	183	Directing Noble Metal Ion Chemistry Within A Design		3e-11
2clu_A	183	Recombinant Human H Ferritin, K86q And E107d Mutant		4e-11
2cei_A	183	Recombinant Human H Ferritin, K86q Mutant, Soaked W		4e-11
4dyx_A	172	Crystal Structure Of The Cu-adduct Of Human H-ferri		4e-11
1rci_A	173	Bullfrog Red Cell L Ferritin TartrateMGPH 5.5 Lengt		5e-11
3ajp_A	182	Crystal Structure Of Human H Ferritin E140a Mutant		5e-11
3ajq_A	182	Crystal Structure Of Human H Ferritin E140q Mutant		5e-11
3ajo_A	182	Crystal Structure Of Wild-Type Human Ferritin H Cha		5e-11
2chi_A	183	Recombinant Human H Ferritin, K86q And E27d Mutant		9e-11
2cn7_A	183	Recombinant Human H Ferritin, K86q, E27d And E107d		9e-11
1r03_A	182	Crystal Structure Of A Human Mitochondrial Ferritin		3e-10
1bg7_A	176	Localized Unfolding At The Junction Of Three Ferrit		4e-10
4dyy_A	172	Crystal Structure Of The Cu-adduct Of Human H-ferri		2e-09
1h96_A	182	Recombinant Mouse L-Chain Ferritin Length = 182		2e-09
4dz0_A	172	Crystal Structure Of The Cu-adduct Of Human H-ferri		3e-09
2zg9_X	174	Crystal Structure Of Pd(Allyl)APO-H114afr Length =		5e-09
2v2p_A	174	Mutant (E53,56,57,60q And R59m) Recombinant Horse S		6e-09
2v2l_A	174	Mutant (E53,56,57,60q) Recombinant Horse Spleen Apo		6e-09
2zg8_X	174	Crystal Structure Of Pd(Allyl)APO-H49afr Length = 1		7e-09
2v2n_A	174	Mutant R59m Recombinant Horse Spleen Apoferritin Co		9e-09
2za6_A	175	Recombinant Horse L-Chain Apoferritin Length = 175		9e-09
2g4h_A	174	Anomalous Substructure Of Apoferritin Length = 174		1e-08
3af9_X	174	Crystal Structure Of Pd(Allyl)APO-C48afr Length = 1		1e-08
2za7_A	171	Recombinant Horse L-Chain Apoferritin N-Terminal De		1e-08
2zur_X	174	Crystal Structure Of Rh(Nbd)APO-Fr Length = 174		1e-08
2gyd_A	170	Complex Of Equine Apoferritin With The H-Diaziflura		1e-08
3hx2_A	192	Crystal Structure Of Human Ferritin Phe167serfsx26		1e-08
3kxu_A	191	Crystal Structure Of Human Ferritin Ftl498instc Pat		1e-08
1ies_A	174	Tetragonal Crystal Structure Of Native Horse Spleen		1e-08
3af8_X	174	Crystal Structure Of Pd(Ally)APO-C126afr Length = 1		2e-08
3np2_X	174	Crystal Structure Of Pd(Allyl)APO-E45cC48A-Rhlfr Le		3e-08
3np0_X	174	Crystal Structure Of Pd(Allyl)APO-E45cH49AR52H-Rhlf		3e-08
2ffx_J	173	Structure Of Human Ferritin L. Chain Length = 173		3e-08
2fg4_A	174	Structure Of Human Ferritin L Chain Length = 174		4e-08
3noz_X	174	Crystal Structure Of Pd(Allyl)APO-E45cR52H-Rhlfr Le		4e-08
2za8_A	167	Recombinant Horse L-Chain Apoferritin N-Terminal De		2e-07
3kx9_A	173	Engineering A Closed Form Of The Archaeoglobus Fulg		2e-07
1s3q_A	173	Crystal Structures Of A Novel Open Pore Ferritin Fr		7e-07
1z4a_A	164	Ferritin From T. Maritima Length = 164		5e-05
1vlg_A	176	Crystal Structure Of Ferritin (Tm1128) From Thermot		1e-04

>pdb|3A9Q|A Chain A, Crystal Structure Analysis Of E173a Variant Of The Soybean Ferritin Sfer4 Length = 212

Iteration: 1
 Score =  158 bits (399), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 76/126 (60%), Positives = 87/126 (69%)
Query: 56  NSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHA 115
           N   LTGV+F+PFEEVKKE            ARQKY DE E+A+NEQINVEYNVSYVYHA
Sbjct: 6   NHRALTGVIFEPFEEVKKELDLVPTVPQASLARQKYVDESESAVNEQINVEYNVSYVYHA 65
Query: 116 LYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAE 175
           ++AYFDRDN+ALRGL                  MEYQN RGGKVKL SI+ P S+FDHA+
Sbjct: 66  MFAYFDRDNVALRGLAKFFKESSEEEREHAEKLMEYQNKRGGKVKLQSIVMPLSDFDHAD 125
Query: 176 KGDALY 181
           KGDAL+
Sbjct: 126 KGDALH 131

>pdb|3A68|A Chain A, Crystal Structure Of Plant Ferritin Reveals A Novel Metal Binding Site That Functions As A Transit Site For Metal Transfer In Ferritin Length = 212

Iteration: 1
 Score =  157 bits (398), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 76/126 (60%), Positives = 87/126 (69%)
Query: 56  NSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHA 115
           N   LTGV+F+PFEEVKKE            ARQKY DE E+A+NEQINVEYNVSYVYHA
Sbjct: 6   NHRALTGVIFEPFEEVKKELDLVPTVPQASLARQKYVDESESAVNEQINVEYNVSYVYHA 65
Query: 116 LYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAE 175
           ++AYFDRDN+ALRGL                  MEYQN RGGKVKL SI+ P S+FDHA+
Sbjct: 66  MFAYFDRDNVALRGLAKFFKESSEEEREHAEKLMEYQNKRGGKVKLQSIVMPLSDFDHAD 125
Query: 176 KGDALY 181
           KGDAL+
Sbjct: 126 KGDALH 131

>pdb|3VNX|A Chain A, Crystal Structure Of Ferritin From Multicellular Green Algae, Ulva Pertusa Length = 204

Iteration: 1
 Score =  109 bits (273), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 56/126 (44%), Positives = 73/126 (57%), Gaps = 1/126 (0%)
Query: 57  SMPLTGVVFQPFEEVKKEXXXXXXXXXXXX-ARQKYEDECEAAINEQINVEYNVSYVYHA 115
           +  +TG+VFQPF EV+ E             AR +Y  ECEAAINEQIN+EY +SYVYHA
Sbjct: 1   AQEVTGMVFQPFSEVQGELSTVTQAPVTDSYARVEYHIECEAAINEQINIEYTISYVYHA 60
Query: 116 LYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAE 175
           L++YF RDN+ L G                   M+YQ  RGG+V+L  +  P  EF + +
Sbjct: 61  LHSYFARDNVGLPGFAKFFKEASDEEREHAHMLMDYQTKRGGRVELKPLAAPEMEFANDD 120
Query: 176 KGDALY 181
           KG+ALY
Sbjct: 121 KGEALY 126

>pdb|3KA8|A Chain A, Frog M-Ferritin, Eqh Mutant, With Cobalt Length = 176

Iteration: 1
 Score = 71.2 bits (173), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 46/83 (55%)
Query: 88  RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXX 147
           RQ Y  +CEAA+N  +N+E   SY Y ++YA+FDRD++AL  +                 
Sbjct: 6   RQNYHSDCEAAVNRMLNLELYASYTYSSMYAFFDRDDVALHNVAEFFKEHSHEEREHAEK 65
Query: 148 XMEYQNLRGGKVKLHSIMQPPSE 170
            M+YQN RGG+V L  I +P  +
Sbjct: 66  FMKYQNKRGGRVVLQDIKKPERD 88

>pdb|3KA9|A Chain A, Frog M-Ferritin, Eeh Mutant, With Cobalt Length = 176

Iteration: 1
 Score = 71.2 bits (173), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 46/83 (55%)
Query: 88  RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXX 147
           RQ Y  +CEAA+N  +N+E   SY Y ++YA+FDRD++AL  +                 
Sbjct: 6   RQNYHSDCEAAVNRMLNLELYASYTYSSMYAFFDRDDVALHNVAEFFKEHSHEEREHAEK 65
Query: 148 XMEYQNLRGGKVKLHSIMQPPSE 170
            M+YQN RGG+V L  I +P  +
Sbjct: 66  FMKYQNKRGGRVVLQDIKKPERD 88

>pdb|1MFR|A Chain A, Crystal Structure Of M Ferritin Length = 176

Iteration: 1
 Score = 71.2 bits (173), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 46/83 (55%)
Query: 88  RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXX 147
           RQ Y  +CEAA+N  +N+E   SY Y ++YA+FDRD++AL  +                 
Sbjct: 6   RQNYHSDCEAAVNRMLNLELYASYTYSSMYAFFDRDDVALHNVAEFFKEHSHEEREHAEK 65
Query: 148 XMEYQNLRGGKVKLHSIMQPPSE 170
            M+YQN RGG+V L  I +P  +
Sbjct: 66  FMKYQNKRGGRVVLQDIKKPERD 88

>pdb|3KA6|A Chain A, Frog M-Ferritin, Eed Mutant, With Cobalt Length = 176

Iteration: 1
 Score = 71.2 bits (173), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 46/83 (55%)
Query: 88  RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXX 147
           RQ Y  +CEAA+N  +N+E   SY Y ++YA+FDRD++AL  +                 
Sbjct: 6   RQNYHSDCEAAVNRMLNLELYASYTYSSMYAFFDRDDVALHNVAEFFKEHSHEEREHAEK 65
Query: 148 XMEYQNLRGGKVKLHSIMQPPSE 170
            M+YQN RGG+V L  I +P  +
Sbjct: 66  FMKYQNKRGGRVVLQDIKKPERD 88

>pdb|3SH6|A Chain A, Frog M-Ferritin, D122r Mutant, With Magnesium Length = 176

Iteration: 1
 Score = 71.2 bits (173), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 46/83 (55%)
Query: 88  RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXX 147
           RQ Y  +CEAA+N  +N+E   SY Y ++YA+FDRD++AL  +                 
Sbjct: 6   RQNYHSDCEAAVNRMLNLELYASYTYSSMYAFFDRDDVALHNVAEFFKEHSHEEREHAEK 65
Query: 148 XMEYQNLRGGKVKLHSIMQPPSE 170
            M+YQN RGG+V L  I +P  +
Sbjct: 66  FMKYQNKRGGRVVLQDIKKPERD 88

>pdb|3SHX|A Chain A, Frog M-Ferritin With Magnesium, L134p Mutant Length = 176

Iteration: 1
 Score = 70.9 bits (172), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 46/83 (55%)
Query: 88  RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXX 147
           RQ Y  +CEAA+N  +N+E   SY Y ++YA+FDRD++AL  +                 
Sbjct: 6   RQNYHSDCEAAVNRMLNLELYASYTYSSMYAFFDRDDVALHNVAEFFKEHSHEEREHAEK 65
Query: 148 XMEYQNLRGGKVKLHSIMQPPSE 170
            M+YQN RGG+V L  I +P  +
Sbjct: 66  FMKYQNKRGGRVVLQDIKKPERD 88

>pdb|3SE1|A Chain A, Frog M-Ferritin With Magnesium, R72d Mutant Length = 176

Iteration: 1
 Score = 68.2 bits (165), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 45/83 (54%)
Query: 88  RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXX 147
           RQ Y  +CEAA+N  +N+E   SY Y ++YA+FDRD++AL  +                 
Sbjct: 6   RQNYHSDCEAAVNRMLNLELYASYTYSSMYAFFDRDDVALHNVAEFFKEHSHEEREHAEK 65
Query: 148 XMEYQNLRGGKVKLHSIMQPPSE 170
            M+YQN  GG+V L  I +P  +
Sbjct: 66  FMKYQNKDGGRVVLQDIKKPERD 88

>pdb|1RCC|A Chain A, Bullfrog Red Cell L Ferritin TartrateMGPH 5.5 Length = 173

Iteration: 1
 Score = 66.6 bits (161), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 46/80 (57%)
Query: 88  RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXX 147
           RQ +  +CEA +N  +N++++ SYVY ++ +YF+RD++AL                    
Sbjct: 6   RQNFHQDCEAGLNRTVNLKFHSSYVYLSMASYFNRDDVALSNFAKFFRERSAAAKAHAEK 65
Query: 148 XMEYQNLRGGKVKLHSIMQP 167
            +EYQN RGG+V L S+ +P
Sbjct: 66  LIEYQNQRGGRVFLQSVEKP 85

>pdb|1RCD|A Chain A, Bullfrog Red Cell L Ferritin TartrateMGPH 5.5 Length = 173

Iteration: 1
 Score = 65.9 bits (159), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 46/80 (57%)
Query: 88  RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXX 147
           RQ +  +CEA +N  +N++++ SYVY ++ +YF+RD++AL                    
Sbjct: 6   RQNFHQDCEAGLNRTVNLKFHSSYVYLSMASYFNRDDVALSNFAKFFRERSEEEKEHAEK 65
Query: 148 XMEYQNLRGGKVKLHSIMQP 167
            +EYQN RGG+V L S+ +P
Sbjct: 66  LIEYQNQRGGRVFLQSVEKP 85

>pdb|3ES3|A Chain A, Directing Noble Metal Ion Chemistry Within A Designed Ferritin Protein. The Complex With Gold Ions. Ferritin H8-H9x Mutant Length = 183

Iteration: 1
 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 45/83 (54%)
Query: 88  RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXX 147
           RQ Y+ + EAAIN QIN+E   SYVY ++  YFDRD++AL+                   
Sbjct: 10  RQNYDQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEERCHAEK 69
Query: 148 XMEYQNLRGGKVKLHSIMQPPSE 170
            M+ QN RGG++ L  I +P  +
Sbjct: 70  LMKLQNQRGGRIFLQDIQKPDRD 92

>pdb|2Z6M|A Chain A, Crystal Structure Of Human Ferritin H8 As Biotemplate For Noble Metal Nanoparticle Synthesis Length = 176

Iteration: 1
 Score = 65.1 bits (157), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 45/83 (54%)
Query: 88  RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXX 147
           RQ Y+ + EAAIN QIN+E   SYVY ++  YFDRD++AL+                   
Sbjct: 9   RQNYDQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEERCHAEK 68
Query: 148 XMEYQNLRGGKVKLHSIMQPPSE 170
            M+ QN RGG++ L  I +P  +
Sbjct: 69  LMKLQNQRGGRIFLQDIKKPDRD 91

>pdb|3ERZ|A Chain A, Directing Noble Metal Ion Chemistry Within A Designed Ferritin Protein. Mercury Ions On The Three-Fold Channel Length = 183

Iteration: 1
 Score = 64.7 bits (156), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 45/83 (54%)
Query: 88  RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXX 147
           RQ Y+ + EAAIN QIN+E   SYVY ++  YFDRD++AL+                   
Sbjct: 10  RQNYDQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEERCHAEK 69
Query: 148 XMEYQNLRGGKVKLHSIMQPPSE 170
            M+ QN RGG++ L  I +P  +
Sbjct: 70  LMKLQNQRGGRIFLQDIKKPDRD 92

>pdb|2CLU|A Chain A, Recombinant Human H Ferritin, K86q And E107d Mutant Length = 183

Iteration: 1
 Score = 64.7 bits (156), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 44/83 (53%)
Query: 88  RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXX 147
           RQ Y  + EAAIN QIN+E   SYVY ++  YFDRD++AL+                   
Sbjct: 10  RQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEK 69
Query: 148 XMEYQNLRGGKVKLHSIMQPPSE 170
            M+ QN RGG++ L  I +P  +
Sbjct: 70  LMKLQNQRGGRIFLQDIQKPDCD 92

>pdb|2CEI|A Chain A, Recombinant Human H Ferritin, K86q Mutant, Soaked With Zn Length = 183

Iteration: 1
 Score = 64.7 bits (156), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 44/83 (53%)
Query: 88  RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXX 147
           RQ Y  + EAAIN QIN+E   SYVY ++  YFDRD++AL+                   
Sbjct: 10  RQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEK 69
Query: 148 XMEYQNLRGGKVKLHSIMQPPSE 170
            M+ QN RGG++ L  I +P  +
Sbjct: 70  LMKLQNQRGGRIFLQDIQKPDCD 92

>pdb|4DYX|A Chain A, Crystal Structure Of The Cu-adduct Of Human H-ferritin Variant 4his- Delta C-star Length = 172

Iteration: 1
 Score = 64.3 bits (155), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 44/83 (53%)
Query: 88  RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXX 147
           RQ Y  + EAAIN QIN+E   SYVY ++  YFDRD++AL+                   
Sbjct: 5   RQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFHHQSHEEHEHAHK 64
Query: 148 XMEYQNLRGGKVKLHSIMQPPSE 170
            M+ QN RGG++ L  I +P  +
Sbjct: 65  LMKLQNQRGGRIFLQDIQKPDED 87

>pdb|1RCI|A Chain A, Bullfrog Red Cell L Ferritin TartrateMGPH 5.5 Length = 173

Iteration: 1
 Score = 64.3 bits (155), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 45/80 (56%)
Query: 88  RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXX 147
           RQ +  +CEA +N  +N+++  SYVY ++ +YF+RD++AL                    
Sbjct: 6   RQNFHQDCEAGLNRTVNLKFYSSYVYLSMASYFNRDDVALSNFAKFFRERSEEEKEHAEK 65
Query: 148 XMEYQNLRGGKVKLHSIMQP 167
            +EYQN RGG+V L S+ +P
Sbjct: 66  LIEYQNQRGGRVFLQSVEKP 85

>pdb|3AJP|A Chain A, Crystal Structure Of Human H Ferritin E140a Mutant Length = 182

Iteration: 1
 Score = 64.3 bits (155), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 44/83 (53%)
Query: 88  RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXX 147
           RQ Y  + EAAIN QIN+E   SYVY ++  YFDRD++AL+                   
Sbjct: 9   RQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEK 68
Query: 148 XMEYQNLRGGKVKLHSIMQPPSE 170
            M+ QN RGG++ L  I +P  +
Sbjct: 69  LMKLQNQRGGRIFLQDIKKPDCD 91

>pdb|3AJQ|A Chain A, Crystal Structure Of Human H Ferritin E140q Mutant Length = 182

Iteration: 1
 Score = 64.3 bits (155), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 44/83 (53%)
Query: 88  RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXX 147
           RQ Y  + EAAIN QIN+E   SYVY ++  YFDRD++AL+                   
Sbjct: 9   RQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEK 68
Query: 148 XMEYQNLRGGKVKLHSIMQPPSE 170
            M+ QN RGG++ L  I +P  +
Sbjct: 69  LMKLQNQRGGRIFLQDIKKPDCD 91

>pdb|3AJO|A Chain A, Crystal Structure Of Wild-Type Human Ferritin H Chain Length = 182

Iteration: 1
 Score = 63.9 bits (154), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 44/83 (53%)
Query: 88  RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXX 147
           RQ Y  + EAAIN QIN+E   SYVY ++  YFDRD++AL+                   
Sbjct: 9   RQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEK 68
Query: 148 XMEYQNLRGGKVKLHSIMQPPSE 170
            M+ QN RGG++ L  I +P  +
Sbjct: 69  LMKLQNQRGGRIFLQDIKKPDCD 91

>pdb|2CHI|A Chain A, Recombinant Human H Ferritin, K86q And E27d Mutant Length = 183

Iteration: 1
 Score = 63.2 bits (152), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 44/83 (53%)
Query: 88  RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXX 147
           RQ Y  + EAAIN QIN++   SYVY ++  YFDRD++AL+                   
Sbjct: 10  RQNYHQDSEAAINRQINLDLYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEK 69
Query: 148 XMEYQNLRGGKVKLHSIMQPPSE 170
            M+ QN RGG++ L  I +P  +
Sbjct: 70  LMKLQNQRGGRIFLQDIQKPDCD 92

>pdb|2CN7|A Chain A, Recombinant Human H Ferritin, K86q, E27d And E107d Mutant Length = 183

Iteration: 1
 Score = 63.2 bits (152), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 44/83 (53%)
Query: 88  RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXX 147
           RQ Y  + EAAIN QIN++   SYVY ++  YFDRD++AL+                   
Sbjct: 10  RQNYHQDSEAAINRQINLDLYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEK 69
Query: 148 XMEYQNLRGGKVKLHSIMQPPSE 170
            M+ QN RGG++ L  I +P  +
Sbjct: 70  LMKLQNQRGGRIFLQDIQKPDCD 92

>pdb|1R03|A Chain A, Crystal Structure Of A Human Mitochondrial Ferritin Length = 182

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/90 (37%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 88  RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXX 147
           RQ +  + EAAIN QIN+E   SYVY ++  YF RD++AL                    
Sbjct: 9   RQNFHPDSEAAINRQINLELYASYVYLSMAYYFSRDDVALNNFSRYFLHQSREETEHAEK 68
Query: 148 XMEYQNLRGGKVKLHSIMQPPSEFDHAEKG 177
            M  QN RGG+++L  I +P  E D  E G
Sbjct: 69  LMRLQNQRGGRIRLQDIKKP--EQDDWESG 96

>pdb|1BG7|A Chain A, Localized Unfolding At The Junction Of Three Ferritin Subunits. A Mechanism For Iron Release? Length = 176

Iteration: 1
 Score = 61.2 bits (147), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 43/83 (51%)
Query: 88  RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXX 147
           RQ +  +CEAAIN  +N+E   SY Y ++  YFDRD+IAL  +                 
Sbjct: 6   RQNFHRDCEAAINRMVNMELYASYTYLSMAFYFDRDDIALHNVAKFFKEQSHEEREHAEK 65
Query: 148 XMEYQNLRGGKVKLHSIMQPPSE 170
            M+ QN RGG++ L  + +P  +
Sbjct: 66  LMKDQNKRGGRIVLQDVQKPERD 88

>pdb|4DYY|A Chain A, Crystal Structure Of The Cu-adduct Of Human H-ferritin Variant Mic1 Length = 172

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 42/83 (50%)
Query: 88  RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXX 147
           RQ Y  + EAAIN QIN+E   SYVY ++  YFDRD++AL+                   
Sbjct: 5   RQNYHQDSEAAINRQINLELYASYVYLSMSEYFDRDDVALKNFAKYFHHQSHEEHEHAHK 64
Query: 148 XMEYQNLRGGKVKLHSIMQPPSE 170
            M+ Q  RGG++ L  I +   +
Sbjct: 65  LMKLQEQRGGRIFLQDIQKADED 87

>pdb|1H96|A Chain A, Recombinant Mouse L-Chain Ferritin Length = 182

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 41/83 (49%)
Query: 88  RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXX 147
           RQ Y  E EAA+N  +N+    SY Y +L  +FDRD++AL G+                 
Sbjct: 5   RQNYSTEVEAAVNRLVNLHLRASYTYLSLGFFFDRDDVALEGVGHFFRELAEEKREGAER 64
Query: 148 XMEYQNLRGGKVKLHSIMQPPSE 170
            +E+QN RGG+     + +P  +
Sbjct: 65  LLEFQNDRGGRALFQDVQKPSQD 87

>pdb|4DZ0|A Chain A, Crystal Structure Of The Cu-adduct Of Human H-ferritin Variant Mic1 Labeled With A Dansyl Fluorophore Length = 172

Iteration: 1
 Score = 58.2 bits (139), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 42/83 (50%)
Query: 88  RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXX 147
           RQ Y  + EAAIN QIN+E   SYVY ++  YFDRD++AL+                   
Sbjct: 5   RQNYHQDSEAAINRQINLELYASYVYLSMSEYFDRDDVALKNFACYFHHQSHEEHEHAHK 64
Query: 148 XMEYQNLRGGKVKLHSIMQPPSE 170
            M+ Q  RGG++ L  I +   +
Sbjct: 65  LMKLQEQRGGRIFLQDIQKADED 87

>pdb|2ZG9|X Chain X, Crystal Structure Of Pd(Allyl)APO-H114afr Length = 174

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 55/116 (47%), Gaps = 2/116 (1%)
Query: 88  RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXX 147
           RQ Y  E EAA+N  +N+    SY Y +L  YFDRD++AL G+                 
Sbjct: 5   RQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVCHFFRELAEEKREGAER 64
Query: 148 XMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYGKFSGLTAALNHLIYSISRLKS 203
            ++ QN RGG+  L   +Q PS+ +     DA+      L  +LN  +  ++ L S
Sbjct: 65  LLKMQNQRGGRA-LFQDLQKPSQDEWGTTPDAMKAAIV-LEKSLNQALLDLAALGS 118

>pdb|2V2P|A Chain A, Mutant (E53,56,57,60q And R59m) Recombinant Horse Spleen Apoferritin Cocrystallized With Haemin In Acidic Conditions Length = 174

Iteration: 1
 Score = 57.4 bits (137), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Query: 88  RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXX 147
           RQ Y  E EAA+N  +N+    SY Y +L  YFDRD++AL G+                 
Sbjct: 5   RQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVCHFFRQLAQQKMQGAER 64
Query: 148 XMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYGKFSGLTAALNHLIYSISRLKS 203
            ++ QN RGG+  L   +Q PS+ +     DA+      L  +LN  +  +  L S
Sbjct: 65  LLKMQNQRGGRA-LFQDLQKPSQDEWGTTPDAMKAAIV-LEKSLNQALLDLHALGS 118

>pdb|2V2L|A Chain A, Mutant (E53,56,57,60q) Recombinant Horse Spleen Apoferritin Cocrystallized With Haemin In Acidic Conditions Length = 174

Iteration: 1
 Score = 57.4 bits (137), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Query: 88  RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXX 147
           RQ Y  E EAA+N  +N+    SY Y +L  YFDRD++AL G+                 
Sbjct: 5   RQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVCHFFRQLAQQKRQGAER 64
Query: 148 XMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYGKFSGLTAALNHLIYSISRLKS 203
            ++ QN RGG+  L   +Q PS+ +     DA+      L  +LN  +  +  L S
Sbjct: 65  LLKMQNQRGGRA-LFQDLQKPSQDEWGTTPDAMKAAIV-LEKSLNQALLDLHALGS 118

>pdb|2ZG8|X Chain X, Crystal Structure Of Pd(Allyl)APO-H49afr Length = 174

Iteration: 1
 Score = 57.0 bits (136), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Query: 88  RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXX 147
           RQ Y  E EAA+N  +N+    SY Y +L  YFDRD++AL G+                 
Sbjct: 5   RQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVCAFFRELAEEKREGAER 64
Query: 148 XMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYGKFSGLTAALNHLIYSISRLKS 203
            ++ QN RGG+  L   +Q PS+ +     DA+      L  +LN  +  +  L S
Sbjct: 65  LLKMQNQRGGRA-LFQDLQKPSQDEWGTTPDAMKAAIV-LEKSLNQALLDLHALGS 118

>pdb|2V2N|A Chain A, Mutant R59m Recombinant Horse Spleen Apoferritin Cocrystallized With Haemin In Acidic Conditions Length = 174

Iteration: 1
 Score = 56.6 bits (135), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Query: 88  RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXX 147
           RQ Y  E EAA+N  +N+    SY Y +L  YFDRD++AL G+                 
Sbjct: 5   RQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVCHFFRELAEEKMEGAER 64
Query: 148 XMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYGKFSGLTAALNHLIYSISRLKS 203
            ++ QN RGG+  L   +Q PS+ +     DA+      L  +LN  +  +  L S
Sbjct: 65  LLKMQNQRGGRA-LFQDLQKPSQDEWGTTPDAMKAAIV-LEKSLNQALLDLHALGS 118

>pdb|2ZA6|A Chain A, Recombinant Horse L-Chain Apoferritin Length = 175

Iteration: 1
 Score = 56.6 bits (135), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Query: 88  RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXX 147
           RQ Y  E EAA+N  +N+    SY Y +L  YFDRD++AL G+                 
Sbjct: 6   RQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVCHFFRELAEEKREGAER 65
Query: 148 XMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYGKFSGLTAALNHLIYSISRLKS 203
            ++ QN RGG+  L   +Q PS+ +     DA+      L  +LN  +  +  L S
Sbjct: 66  LLKMQNQRGGRA-LFQDLQKPSQDEWGTTPDAMKAAIV-LEKSLNQALLDLHALGS 119

>pdb|2G4H|A Chain A, Anomalous Substructure Of Apoferritin Length = 174

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Query: 88  RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXX 147
           RQ Y  E EAA+N  +N+    SY Y +L  YFDRD++AL G+                 
Sbjct: 5   RQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVCHFFRELAEEKREGAER 64
Query: 148 XMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYGKFSGLTAALNHLIYSISRLKS 203
            ++ QN RGG+  L   +Q PS+ +     DA+      L  +LN  +  +  L S
Sbjct: 65  LLKMQNQRGGRA-LFQDLQKPSQDEWGTTPDAMKAAIV-LEKSLNQALLDLHALGS 118

>pdb|3AF9|X Chain X, Crystal Structure Of Pd(Allyl)APO-C48afr Length = 174

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Query: 88  RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXX 147
           RQ Y  E EAA+N  +N+    SY Y +L  YFDRD++AL G+                 
Sbjct: 5   RQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVAHFFRELAEEKREGAER 64
Query: 148 XMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYGKFSGLTAALNHLIYSISRLKS 203
            ++ QN RGG+  L   +Q PS+ +     DA+      L  +LN  +  +  L S
Sbjct: 65  LLKMQNQRGGRA-LFQDLQKPSQDEWGTTLDAMKAAIV-LEKSLNQALLDLHALGS 118

>pdb|2ZA7|A Chain A, Recombinant Horse L-Chain Apoferritin N-Terminal Deletion Mutant (Residues 1-4) Length = 171

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Query: 88  RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXX 147
           RQ Y  E EAA+N  +N+    SY Y +L  YFDRD++AL G+                 
Sbjct: 2   RQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVCHFFRELAEEKREGAER 61
Query: 148 XMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYGKFSGLTAALNHLIYSISRLKS 203
            ++ QN RGG+  L   +Q PS+ +     DA+      L  +LN  +  +  L S
Sbjct: 62  LLKMQNQRGGRA-LFQDLQKPSQDEWGTTPDAMKAAIV-LEKSLNQALLDLHALGS 115

>pdb|2ZUR|X Chain X, Crystal Structure Of Rh(Nbd)APO-Fr Length = 174

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 55/116 (47%), Gaps = 2/116 (1%)
Query: 88  RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXX 147
           RQ Y  E EAA+N  +N+    SY Y +L  YFDRD++AL G+                 
Sbjct: 5   RQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVXHFFRELAEEKREGAER 64
Query: 148 XMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYGKFSGLTAALNHLIYSISRLKS 203
            ++ QN RGG+  L   +Q PS+ +     DA+      L  +LN  +  +  L S
Sbjct: 65  LLKMQNQRGGRA-LFQDLQKPSQDEWGTTLDAMKAAIV-LEKSLNQALLDLHALGS 118

>pdb|2GYD|A Chain A, Complex Of Equine Apoferritin With The H-Diaziflurane Photolabeling Reagent Length = 170

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Query: 88  RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXX 147
           RQ Y  E EAA+N  +N+    SY Y +L  YFDRD++AL G+                 
Sbjct: 4   RQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVCHFFRELAEEKREGAER 63
Query: 148 XMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYGKFSGLTAALNHLIYSISRLKS 203
            ++ QN RGG+  L   +Q PS+ +     DA+      L  +LN  +  +  L S
Sbjct: 64  LLKMQNQRGGRA-LFQDLQKPSQDEWGTTLDAMKAAIV-LEKSLNQALLDLHALGS 117

>pdb|3HX2|A Chain A, Crystal Structure Of Human Ferritin Phe167serfsx26 Mutant. This File Is A Part 13 OF THE SPLIT ENTRY AND CONTAINS THE Copies 1 And 2 Of The Total Six Copies Of The Biological Unit That Are Present In The Crystallographic Asymmetric Unit. The Entire Structure Contains Six Copies Of The Biological Unit In The Crystallographic Asymmetric Unit And Is Described In Remark 400 Length = 192

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Query: 88  RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXX 147
           RQ Y  + EAA+N  +N+    SY Y +L  YFDRD++AL G+                 
Sbjct: 7   RQNYSTDVEAAVNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEKREGYER 66
Query: 148 XMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYGKFSGLTAALNHLIYSISRLKS 203
            ++ QN RGG+     I + P+E +  +  DA+    + L   LN  +  +  L S
Sbjct: 67  LLKMQNQRGGRALFQDI-KKPAEDEWGKTPDAMKAAMA-LEKKLNQALLDLHALGS 120

>pdb|3KXU|A Chain A, Crystal Structure Of Human Ferritin Ftl498instc Pathogenic M Length = 191

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Query: 88  RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXX 147
           RQ Y  + EAA+N  +N+    SY Y +L  YFDRD++AL G+                 
Sbjct: 6   RQNYSTDVEAAVNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEKREGYER 65
Query: 148 XMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYGKFSGLTAALNHLIYSISRLKS 203
            ++ QN RGG+     I + P+E +  +  DA+    + L   LN  +  +  L S
Sbjct: 66  LLKMQNQRGGRALFQDI-KKPAEDEWGKTPDAMKAAMA-LEKKLNQALLDLHALGS 119

>pdb|1IES|A Chain A, Tetragonal Crystal Structure Of Native Horse Spleen Ferritin Length = 174

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Query: 88  RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXX 147
           RQ Y  E EAA+N  +N+    SY Y +L  YFDRD++AL G+                 
Sbjct: 5   RQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVCHFFRELAEEKREGAER 64
Query: 148 XMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYGKFSGLTAALNHLIYSISRLKS 203
            ++ QN RGG+  L   +Q PS+ +     DA+      L  +LN  +  +  L S
Sbjct: 65  LLKMQNQRGGRA-LFQDLQKPSQDEWGTTLDAMKAAIV-LEKSLNQALLDLHALGS 118

>pdb|3AF8|X Chain X, Crystal Structure Of Pd(Ally)APO-C126afr Length = 174

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Query: 88  RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXX 147
           RQ Y  E EAA+N  +N+    SY Y +L  YFDRD++AL G+                 
Sbjct: 5   RQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVCHFFRELAEEKREGAER 64
Query: 148 XMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYGKFSGLTAALNHLIYSISRLKS 203
            ++ QN RGG+  L   +Q PS+ +     DA+      L  +LN  +  +  L S
Sbjct: 65  LLKMQNQRGGRA-LFQDLQKPSQDEWGTTLDAMKAAIV-LEKSLNQALLDLHALGS 118

>pdb|3NP2|X Chain X, Crystal Structure Of Pd(Allyl)APO-E45cC48A-Rhlfr Length = 174

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Query: 88  RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXX 147
           RQ Y  E EAA+N  +N+    SY Y +L  YFDRD++AL G+                 
Sbjct: 5   RQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALCGVAHFFRELAEEKREGAER 64
Query: 148 XMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYGKFSGLTAALNHLIYSISRLKS 203
            ++ QN RGG+  L   +Q PS+ +     DA+      L  +LN  +  +  L S
Sbjct: 65  LLKMQNQRGGRA-LFQDLQKPSQDEWGTTLDAMKAAIV-LEKSLNQALLDLHALGS 118

>pdb|3NP0|X Chain X, Crystal Structure Of Pd(Allyl)APO-E45cH49AR52H-Rhlfr Length = 174

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Query: 88  RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXX 147
           RQ Y  E EAA+N  +N+    SY Y +L  YFDRD++AL G+                 
Sbjct: 5   RQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALCGVCAFFHELAEEKREGAER 64
Query: 148 XMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYGKFSGLTAALNHLIYSISRLKS 203
            ++ QN RGG+  L   +Q PS+ +     DA+      L  +LN  +  +  L S
Sbjct: 65  LLKMQNQRGGRA-LFQDLQKPSQDEWGTTLDAMKAAIV-LEKSLNQALLDLHALGS 118

>pdb|2FFX|J Chain J, Structure Of Human Ferritin L. Chain Length = 173

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Query: 88  RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXX 147
           RQ Y  + EAA+N  +N+    SY Y +L  YFDRD++AL G+                 
Sbjct: 5   RQNYSTDVEAAVNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEKREGYER 64
Query: 148 XMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYGKFSGLTAALNHLIYSISRLKS 203
            ++ QN RGG+     I + P+E +  +  DA+    + L   LN  +  +  L S
Sbjct: 65  LLKMQNQRGGRALFQDI-KKPAEDEWGKTPDAMKAAMA-LEKKLNQALLDLHALGS 118

>pdb|2FG4|A Chain A, Structure Of Human Ferritin L Chain Length = 174

Iteration: 1
 Score = 54.7 bits (130), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Query: 88  RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXX 147
           RQ Y  + EAA+N  +N+    SY Y +L  YFDRD++AL G+                 
Sbjct: 5   RQNYSTDVEAAVNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEKREGYER 64
Query: 148 XMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYGKFSGLTAALNHLIYSISRLKS 203
            ++ QN RGG+     I + P+E +  +  DA+    + L   LN  +  +  L S
Sbjct: 65  LLKMQNQRGGRALFQDI-KKPAEDEWGKTPDAMKAAMA-LEKKLNQALLDLHALGS 118

>pdb|3NOZ|X Chain X, Crystal Structure Of Pd(Allyl)APO-E45cR52H-Rhlfr Length = 174

Iteration: 1
 Score = 54.7 bits (130), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Query: 88  RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXX 147
           RQ Y  E EAA+N  +N+    SY Y +L  YFDRD++AL G+                 
Sbjct: 5   RQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALCGVCHFFHELAEEKREGAER 64
Query: 148 XMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYGKFSGLTAALNHLIYSISRLKS 203
            ++ QN RGG+  L   +Q PS+ +     DA+      L  +LN  +  +  L S
Sbjct: 65  LLKMQNQRGGRA-LFQDLQKPSQDEWGTTLDAMKAAIV-LEKSLNQALLDLHALGS 118

>pdb|2ZA8|A Chain A, Recombinant Horse L-Chain Apoferritin N-Terminal Deletion Mutant (Residues 1-8) Length = 167

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 2/113 (1%)
Query: 91  YEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXME 150
           Y  E EAA+N  +N+    SY Y +L  YFDRD++AL G+                  ++
Sbjct: 1   YSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVCHFFRELAEEKREGAERLLK 60
Query: 151 YQNLRGGKVKLHSIMQPPSEFDHAEKGDALYGKFSGLTAALNHLIYSISRLKS 203
            QN RGG+  L   +Q PS+ +     DA+      L  +LN  +  +  L S
Sbjct: 61  MQNQRGGRA-LFQDLQKPSQDEWGTTPDAMKAAIV-LEKSLNQALLDLHALGS 111

>pdb|3KX9|A Chain A, Engineering A Closed Form Of The Archaeoglobus Fulgidus Ferritin By Site Directed Mutagenesis Length = 173

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 98  AINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGG 157
           A+N QIN E   +Y+Y ++ +YFD  +I L+G                    ++ + RGG
Sbjct: 11  ALNRQINAEIYSAYLYLSMASYFD--SIGLKGFSNWMRVQWQEELMHAMKMFDFVSERGG 68
Query: 158 KVKLHSIMQPPSEFD 172
           +VKL+++ +PPSE+D
Sbjct: 69  RVKLYAVEEPPSEWD 83

>pdb|1S3Q|A Chain A, Crystal Structures Of A Novel Open Pore Ferritin From The Hyperthermophilic Archaeon Archaeoglobus Fulgidus Length = 173

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 98  AINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGG 157
           A+N QIN E   +Y+Y +  +YFD  +I L+G                    ++ + RGG
Sbjct: 11  ALNRQINAEIYSAYLYLSXASYFD--SIGLKGFSNWXRVQWQEELXHAXKXFDFVSERGG 68
Query: 158 KVKLHSIMQPPSEFD 172
           +VKL+++ +PPSE+D
Sbjct: 69  RVKLYAVEEPPSEWD 83

>pdb|1Z4A|A Chain A, Ferritin From T. Maritima Length = 164

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 49/112 (43%), Gaps = 13/112 (11%)
Query: 98  AINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGG 157
           A+NEQ+N E   SY+Y ++  YFD +    +G                    EY   RGG
Sbjct: 11  ALNEQLNREIYSSYLYLSMATYFDAE--GFKGFAHWMKKQAQEELTHAMKFYEYIYERGG 68
Query: 158 KVKLHSIMQPPSEFDHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILL 209
           +V+L +I +PPS ++         G      AAL H  +    +  YN++ L
Sbjct: 69  RVELEAIEKPPSNWN---------GIKDAFEAALKHEEFVTQSI--YNILEL 109

>pdb|1VLG|A Chain A, Crystal Structure Of Ferritin (Tm1128) From Thermotoga Maritima At 2.00 A Resolution Length = 176

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 13/112 (11%)
Query: 98  AINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGG 157
           A+N+Q+N E   SY+Y ++  YFD +    +G                    EY   RGG
Sbjct: 23  ALNDQLNREIYSSYLYLSMATYFDAE--GFKGFAHWMKKQAQEELTHAMKFYEYIYERGG 80
Query: 158 KVKLHSIMQPPSEFDHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILL 209
           +V+L +I +PPS ++         G      AAL H  +    +  YN++ L
Sbjct: 81  RVELEAIEKPPSNWN---------GIKDAFEAALKHEEFVTQSI--YNILEL 121

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	212
3a68_A	212	Sferh-4, ferritin-4, chloroplastic; 4-helix bundle	2e-60
3vnx_A	204	Ferritin; 4-helix bundle, iron storage, oxidoreduc	5e-58
2cih_A	183	Ferritin heavy chain; apoferritin, ferroxidase, DI	2e-41
1rcd_A	173	L ferritin; iron storage; 2.00A {Rana catesbeiana}	4e-40
3ka8_A	176	Ferritin, middle subunit; iron storage, DIIRON, ir	5e-40
3oj5_A	189	Ferritin family protein; ferroxidase, cytosol, oxi	7e-40
1vlg_A	176	Ferritin; TM1128, structural genomics, JCSG, prote	3e-39
1z6o_M	191	Ferritin heavy chain; metal binding protein, iron	3e-39
2v2p_A	174	Ferritin light chain; metal transport, iron, haemi	4e-39
3kxu_A	191	Ferritin; iron storage protein, disorder, iron, me	9e-39
3e6s_A	168	Ferritin; iron storage, ferroxidase, oxidoreductas	2e-38
1eum_A	165	Ferritin 1; ECFTNA, metal binding protein; 2.05A {	1e-37
2jd6_0	174	Ferritin homolog, ferritin; metal transport, iron,	3e-37
3qz3_A	184	Ferritin; structural genomics, the center for stru	3e-37
1s3q_A	173	Ferritin; ferroxidase, four helix bundle, iron sto	5e-37
1krq_A	167	Ferritin; H-chain like four-helix bundle, binding	6e-37
3bvf_A	181	Ferritin; iron storage, metal-binding, oxidoreduct	7e-37
1z6o_A	212	Ferritin light chain; metal binding protein, iron	1e-31
1jgc_A	161	Bacterioferritin, BFR; iron storage protein, metal	5e-08
2y3q_A	158	Bacterioferritin; metal binding protein, redox; HE	1e-07
2fkz_A	155	Bacterioferritin; ferroxidase, DIIRON site, iron T	2e-07
3qb9_A	174	Bacterioferritin, BFR; cytosol, structural genomic	2e-07
3r2k_A	154	Bacterioferritin, BFR; bacterial ferritin, iron bi	5e-07
3fvb_A	182	Bacterioferritin; niaid, ssgcid, decode, structura	6e-06
3gvy_A	161	Bacterioferritin; iron storage, DI-iron, ferroxida	4e-05
1nfv_A	179	Bacterioferritin; 24 subunits in the active molecu	2e-04

>3a68_A Sferh-4, ferritin-4, chloroplastic; 4-helix bundle, iron storage, CAGE-like protein, plant, iron, metal-binding, oxidoreductase, plastid; 1.80A {Glycine max} PDB: 3a9q_A Length = 212

 Score =  187 bits (477), Expect = 2e-60
 Identities = 101/143 (70%), Positives = 115/143 (80%), Gaps = 4/143 (2%)

Query: 51  AAVDANSMPLTGVVFQPFEEVKKEVLDVPVSPLLSLARQKYEDECEAAINEQINVEYNVS 110
           A    N   LTGV+F+PFEEVKKE+  VP  P  SLARQKY DE E+A+NEQINVEYNVS
Sbjct: 1   AKGSTNHRALTGVIFEPFEEVKKELDLVPTVPQASLARQKYVDESESAVNEQINVEYNVS 60

Query: 111 YVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPSE 170
           YVYHA++AYFDRDN+ALRGLAKFFKESSEEEREHAEK MEYQN RGGKVKL SI+ P S+
Sbjct: 61  YVYHAMFAYFDRDNVALRGLAKFFKESSEEEREHAEKLMEYQNKRGGKVKLQSIVMPLSD 120

Query: 171 FDHAEKGDALYGKFSGLTAALNH 193
           FDHA+KGDAL+     +  AL+ 
Sbjct: 121 FDHADKGDALH----AMELALSL 139

>3vnx_A Ferritin; 4-helix bundle, iron storage, oxidoreductase; 2.40A {Ulva pertusa} Length = 204

 Score =  181 bits (460), Expect = 5e-58
 Identities = 74/138 (53%), Positives = 98/138 (71%), Gaps = 5/138 (3%)

Query: 57  SMPLTGVVFQPFEEVKKEVLDVPVSPLL-SLARQKYEDECEAAINEQINVEYNVSYVYHA 115
           +  +TG+VFQPF EV+ E+  V  +P+  S AR +Y  ECEAAINEQIN+EY +SYVYHA
Sbjct: 1   AQEVTGMVFQPFSEVQGELSTVTQAPVTDSYARVEYHIECEAAINEQINIEYTISYVYHA 60

Query: 116 LYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPSEFDHAE 175
           L++YF RDN+ L G AKFFKE+S+EEREHA   M+YQ  RGG+V+L  +  P  EF + +
Sbjct: 61  LHSYFARDNVGLPGFAKFFKEASDEEREHAHMLMDYQTKRGGRVELKPLAAPEMEFANDD 120

Query: 176 KGDALYGKFSGLTAALNH 193
           KG+ALY     +  AL+ 
Sbjct: 121 KGEALY----AMELALSL 134

>2cih_A Ferritin heavy chain; apoferritin, ferroxidase, DI-iron non-heme protein, iron storage, iron, metal-binding, oxidoreductase, phosphorylation; 1.5A {Homo sapiens} PDB: 2chi_A 2cei_A 1fha_A 2fha_A 2cn7_A 2iu2_A 2clu_A 2cn6_A 3ajo_A 3ajq_A 3ajp_A 3erz_A 3es3_A 2z6m_A 1r03_A Length = 183

 Score =  137 bits (348), Expect = 2e-41
 Identities = 44/93 (47%), Positives = 59/93 (63%)

Query: 81  SPLLSLARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEE 140
           +   S  RQ Y  + EAAIN QIN++   SYVY ++  YFDRD++AL+  AK+F   S E
Sbjct: 3   TASTSQVRQNYHQDSEAAINRQINLDLYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHE 62

Query: 141 EREHAEKFMEYQNLRGGKVKLHSIMQPPSEFDH 173
           EREHAEK M+ QN RGG++ L  I +P  +   
Sbjct: 63  EREHAEKLMKLQNQRGGRIFLQDIQKPDCDDWE 95

>1rcd_A L ferritin; iron storage; 2.00A {Rana catesbeiana} SCOP: a.25.1.1 PDB: 1rcg_A 1rci_A 1rcc_A 1rce_A Length = 173

 Score =  134 bits (339), Expect = 4e-40
 Identities = 47/109 (43%), Positives = 69/109 (63%), Gaps = 8/109 (7%)

Query: 85  SLARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREH 144
           S  RQ +  +CEA +N  +N++++ SYVY ++ +YF+RD++AL   AKFF+E SEEE+EH
Sbjct: 3   SQVRQNFHQDCEAGLNRTVNLKFHSSYVYLSMASYFNRDDVALSNFAKFFRERSEEEKEH 62

Query: 145 AEKFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYGKFSGLTAALNH 193
           AEK +EYQN RGG+V L S+ +P       +  + L      L  AL  
Sbjct: 63  AEKLIEYQNQRGGRVFLQSVEKPE----RDDWANGLE----ALQTALKL 103

>3ka8_A Ferritin, middle subunit; iron storage, DIIRON, iron, metal-binding, oxidoreductase; 1.35A {Rana catesbeiana} PDB: 3ka9_A 3ka3_A 1mfr_A 3ka4_A 3rbc_A 3re7_A 3rgd_A 3ka6_A 3shx_A 3sh6_A 3se1_A 1bg7_A Length = 176

 Score =  133 bits (338), Expect = 5e-40
 Identities = 48/90 (53%), Positives = 64/90 (71%)

Query: 84  LSLARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEERE 143
           +S  RQ Y  +CEAA+N  +N+E   SY Y ++YA+FDRD++AL  +A+FFKE S EERE
Sbjct: 2   VSQVRQNYHSDCEAAVNRMLNLELYASYTYSSMYAFFDRDDVALHNVAEFFKEHSHEERE 61

Query: 144 HAEKFMEYQNLRGGKVKLHSIMQPPSEFDH 173
           HAEKFM+YQN RGG+V L  I +P  +   
Sbjct: 62  HAEKFMKYQNKRGGRVVLQDIKKPERDEWG 91

>3oj5_A Ferritin family protein; ferroxidase, cytosol, oxidoreductase; 2.85A {Mycobacterium tuberculosis} PDB: 3qd8_A Length = 189

 Score =  133 bits (338), Expect = 7e-40
 Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 2/89 (2%)

Query: 88  RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEK 147
            +  + +  A + EQI+ E+  +  Y A+  YFD ++  L  LAK F   + EER HA  
Sbjct: 4   YEGPKTKFHALMQEQIHNEFTAAQQYVAIAVYFDSED--LPQLAKHFYSQAVEERNHAMM 61

Query: 148 FMEYQNLRGGKVKLHSIMQPPSEFDHAEK 176
            +++   R  +V++  +    ++FD   +
Sbjct: 62  LVQHLLDRDLRVEIPGVDTVRNQFDRPRE 90

>1vlg_A Ferritin; TM1128, structural genomics, JCSG, protein structu initiative, PSI, joint center for structural genomics, META protein; 2.00A {Thermotoga maritima} SCOP: a.25.1.1 PDB: 1z4a_A* Length = 176

 Score =  132 bits (334), Expect = 3e-39
 Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 8/98 (8%)

Query: 85  SLARQKYE------DECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESS 138
                 +       ++   A+N+Q+N E   SY+Y ++  YFD +    +G A + K+ +
Sbjct: 4   DKIHHHHHHMMVISEKVRKALNDQLNREIYSSYLYLSMATYFDAE--GFKGFAHWMKKQA 61

Query: 139 EEEREHAEKFMEYQNLRGGKVKLHSIMQPPSEFDHAEK 176
           +EE  HA KF EY   RGG+V+L +I +PPS ++  + 
Sbjct: 62  QEELTHAMKFYEYIYERGGRVELEAIEKPPSNWNGIKD 99

>1z6o_M Ferritin heavy chain; metal binding protein, iron storage; 1.91A {Trichoplusia NI} SCOP: a.25.1.1 Length = 191

 Score =  132 bits (334), Expect = 3e-39
 Identities = 28/112 (25%), Positives = 48/112 (42%), Gaps = 7/112 (6%)

Query: 85  SLARQKYE---DECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEE 141
               + +      C  ++ +QI +E   S  Y A+ A+F +D +   G A+ F +++ EE
Sbjct: 8   VQIPKDWITMHRSCRNSMRQQIQMEVGASLQYLAMGAHFSKDVVNRPGFAQLFFDAASEE 67

Query: 142 REHAEKFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYGKFSGLTAALNH 193
           REHA K +EY  +RG      S +        +     +      L  AL+ 
Sbjct: 68  REHAMKLIEYLLMRGELTNDVSSLLQVRPPTRSSWKGGVE----ALEHALSM 115

>2v2p_A Ferritin light chain; metal transport, iron, haemin, apoferritin, iron storage, metal-binding; 1.15A {Equus caballus} PDB: 2v2r_A 2v2m_A 2v2l_A 2v2s_A 2v2o_A 2v2n_A 2za6_A 2v2j_A 2v2i_A 2z5p_A 1dat_A 2g4h_A 1aew_A 3h7g_A 2zg9_X 2zg8_X 3fi6_A 3o7r_A 2w0o_A 1hrs_A* ... Length = 174

 Score =  131 bits (331), Expect = 4e-39
 Identities = 32/89 (35%), Positives = 53/89 (59%)

Query: 85  SLARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREH 144
           S  RQ Y  E EAA+N  +N+    SY Y +L  YFDRD++AL G+  FF++ ++++ + 
Sbjct: 2   SQIRQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVCHFFRQLAQQKMQG 61

Query: 145 AEKFMEYQNLRGGKVKLHSIMQPPSEFDH 173
           AE+ ++ QN RGG+     + +P  +   
Sbjct: 62  AERLLKMQNQRGGRALFQDLQKPSQDEWG 90

>3kxu_A Ferritin; iron storage protein, disorder, iron, metal binding protein; 1.85A {Homo sapiens} PDB: 3hx2_A 3hx5_A 3hx7_A Length = 191

 Score =  131 bits (331), Expect = 9e-39
 Identities = 36/89 (40%), Positives = 54/89 (60%)

Query: 85  SLARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREH 144
           S  RQ Y  + EAA+N  +N+    SY Y +L  YFDRD++AL G++ FF+E +EE+RE 
Sbjct: 3   SQIRQNYSTDVEAAVNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEKREG 62

Query: 145 AEKFMEYQNLRGGKVKLHSIMQPPSEFDH 173
            E+ ++ QN RGG+     I +P  +   
Sbjct: 63  YERLLKMQNQRGGRALFQDIKKPAEDEWG 91

>3e6s_A Ferritin; iron storage, ferroxidase, oxidoreductase; 1.95A {Pseudo-nitzschia multiseries} PDB: 3e6r_A Length = 168

 Score =  129 bits (327), Expect = 2e-38
 Identities = 25/101 (24%), Positives = 45/101 (44%), Gaps = 9/101 (8%)

Query: 93  DECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQ 152
           +E     N Q+  E+  S VY +   +FD+++    G+A +    S EEREH   F+++ 
Sbjct: 3   EELLDLFNRQVTQEFTASQVYLSASIWFDQND--WEGMAAYMLAESAEEREHGLGFVDFA 60

Query: 153 NLRGGKVKLHSIMQPPSEFDHAEKGDALYGKFSGLTAALNH 193
           N R   ++L ++  P S  + +   D          + L  
Sbjct: 61  NKRNIPIELQAVPAPVSCAEWSSPEDV-------WQSILEL 94

>1eum_A Ferritin 1; ECFTNA, metal binding protein; 2.05A {Escherichia coli} SCOP: a.25.1.1 Length = 165

 Score =  127 bits (321), Expect = 1e-37
 Identities = 19/84 (22%), Positives = 40/84 (47%), Gaps = 2/84 (2%)

Query: 93  DECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQ 152
            E    +NEQ+N+E   S +Y  + A+         G A F +  ++EE  H ++  +Y 
Sbjct: 4   PEMIEKLNEQMNLELYSSLLYQQMSAWCSYHT--FEGAAAFLRRHAQEEMTHMQRLFDYL 61

Query: 153 NLRGGKVKLHSIMQPPSEFDHAEK 176
              G   +++++  P +E+   ++
Sbjct: 62  TDTGNLPRINTVESPFAEYSSLDE 85

>2jd6_0 Ferritin homolog, ferritin; metal transport, iron, pores, archaeon, entry channels, thermostability, hyperthermophIle, ferroxidase center; 2.75A {Pyrococcus furiosus} PDB: 2jd7_0 2jd8_0 2x17_0 Length = 174

 Score =  126 bits (320), Expect = 3e-37
 Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 2/83 (2%)

Query: 93  DECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQ 152
           +    A+N+Q+N E   +Y+Y A+ AYF+  ++ L G A + K  +EEE  HA +F  Y 
Sbjct: 4   ERMLKALNDQLNRELYSAYLYFAMAAYFE--DLGLEGFANWMKAQAEEEIGHALRFYNYI 61

Query: 153 NLRGGKVKLHSIMQPPSEFDHAE 175
             R G+V+L  I +PP E++   
Sbjct: 62  YDRNGRVELDEIPKPPKEWESPL 84

>3qz3_A Ferritin; structural genomics, the center for structural genomics of I diseases, csgid, cytoplasmic, oxidoreductase; 2.10A {Vibrio cholerae o1 biovar el tor} Length = 184

 Score =  127 bits (320), Expect = 3e-37
 Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 5/94 (5%)

Query: 85  SLARQKY---EDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEE 141
           +   Q++          +NEQIN+E+  S +Y  + A+ +  +    G A+F +  + EE
Sbjct: 2   NAMNQEFFMLSQAMVEHLNEQINLEFFSSNLYLQMSAWCE--DKGFDGAAEFLRAHAVEE 59

Query: 142 REHAEKFMEYQNLRGGKVKLHSIMQPPSEFDHAE 175
            +H ++   Y +  G    L +I  P  +F    
Sbjct: 60  MQHMQRLFTYVSETGALPILGAIAAPRHDFASLG 93

>1s3q_A Ferritin; ferroxidase, four helix bundle, iron storage, metal binding; 2.10A {Archaeoglobus fulgidus} SCOP: a.25.1.1 PDB: 1sq3_A 3kx9_A Length = 173

 Score =  126 bits (318), Expect = 5e-37
 Identities = 30/83 (36%), Positives = 53/83 (63%), Gaps = 2/83 (2%)

Query: 93  DECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQ 152
           ++   A+N QIN E   +Y+Y ++ +YFD  +I L+G + + +   +EE  HA K  ++ 
Sbjct: 6   EKMVEALNRQINAEIYSAYLYLSMASYFD--SIGLKGFSNWMRVQWQEELMHAMKMFDFV 63

Query: 153 NLRGGKVKLHSIMQPPSEFDHAE 175
           + RGG+VKL+++ +PPSE+D   
Sbjct: 64  SERGGRVKLYAVEEPPSEWDSPL 86

>1krq_A Ferritin; H-chain like four-helix bundle, binding protein; 2.70A {Campylobacter jejuni} SCOP: a.25.1.1 Length = 167

 Score =  125 bits (317), Expect = 6e-37
 Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 2/83 (2%)

Query: 93  DECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQ 152
            E    +NEQIN E   + +Y ++ ++   ++  L G   F    + EE +HA+K + Y 
Sbjct: 4   KEVVKLLNEQINKEMYAANLYLSMSSWCYENS--LDGAGAFLFAHASEESDHAKKLITYL 61

Query: 153 NLRGGKVKLHSIMQPPSEFDHAE 175
           N     V+L  + QP   F    
Sbjct: 62  NETDSHVELQEVKQPEQNFKSLL 84

>1z6o_A Ferritin light chain; metal binding protein, iron storage; 1.91A {Trichoplusia NI} SCOP: a.25.1.1 Length = 212

 Score =  113 bits (284), Expect = 1e-31
 Identities = 17/98 (17%), Positives = 31/98 (31%), Gaps = 1/98 (1%)

Query: 85  SLARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREH 144
                         +     +    SY Y    AYF+       G +K FK+ S+E    
Sbjct: 27  VYGEYGSHGNVATELQAYAKLHLERSYDYLLSAAYFNNYQTNRAGFSKLFKKLSDEAWSK 86

Query: 145 AEKFMEYQNLRGGKVKLHSIMQPPSEF-DHAEKGDALY 181
               +++   RG K+         +E  ++  +   L 
Sbjct: 87  TIDIIKHVTKRGDKMNFDQHSTMKTERKNYTAENHELE 124

>1jgc_A Bacterioferritin, BFR; iron storage protein, metal binding protein; HET: HEM; 2.60A {Rhodobacter capsulatus} SCOP: a.25.1.1 Length = 161

 Score = 49.6 bits (118), Expect = 5e-08
 Identities = 16/76 (21%), Positives = 25/76 (32%), Gaps = 2/76 (2%)

Query: 100 NEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKV 159
           N  +  E      Y   +   +  +  L  +AK  +E S EE  HA+K +       G  
Sbjct: 12  NAALRSELTAISQYWVHFRLQE--DWGLAKMAKKSREESIEEMGHADKIIARILFLEGHP 69

Query: 160 KLHSIMQPPSEFDHAE 175
            L  +          E
Sbjct: 70  NLQKLDPLRIGEGPRE 85

>2y3q_A Bacterioferritin; metal binding protein, redox; HET: HEM; 1.55A {Escherichia coli} PDB: 1bfr_A* 1bcf_A* 2htn_A* 2vxi_A* 3e1j_A* 3e1l_A* 3e1m_A* 3e1n_A* 3e1o_A* 3e1p_A* 3ghq_A* 3e1q_A* 3e2c_A* 3isf_A* 3is8_A* 3ise_A* 3is7_A* Length = 158

 Score = 48.8 bits (116), Expect = 1e-07
 Identities = 16/79 (20%), Positives = 28/79 (35%), Gaps = 2/79 (2%)

Query: 97  AAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRG 156
             +N+ +  E      Y      F   N  L+ L       S +E +HA++++E      
Sbjct: 9   NYLNKLLGNELVAINQYFLHARMFK--NWGLKRLNDVEYHESIDEMKHADRYIERILFLE 66

Query: 157 GKVKLHSIMQPPSEFDHAE 175
           G   L  + +     D  E
Sbjct: 67  GLPNLQDLGKLNIGEDVEE 85

>2fkz_A Bacterioferritin; ferroxidase, DIIRON site, iron T metal binding protein; HET: HEM; 2.00A {Azotobacter vinelandii} SCOP: a.25.1.1 PDB: 2fl0_A* 1sof_A* Length = 155

 Score = 48.0 bits (114), Expect = 2e-07
 Identities = 17/108 (15%), Positives = 32/108 (29%), Gaps = 2/108 (1%)

Query: 97  AAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRG 156
             +N+ +  E      Y      ++  +  L  L K     S +E +HA+K ++      
Sbjct: 9   QHLNKILGNELIAINQYFLHARMYE--DWGLEKLGKHEYHESIDEMKHADKLIKRILFLE 66

Query: 157 GKVKLHSIMQPPSEFDHAEKGDALYGKFSGLTAALNHLIYSISRLKSY 204
           G   L  + +        E  +            L   I     +  Y
Sbjct: 67  GLPNLQELGKLLIGEHTKEMLECDLKLEQAGLPDLKAAIAYCESVGDY 114

>3qb9_A Bacterioferritin, BFR; cytosol, structural genomics, TB structural genomics consort TBSGC, metal binding protein; HET: HEM; 2.11A {Mycobacterium tuberculosis} PDB: 2wtl_A* 3bkn_A* Length = 174

 Score = 48.1 bits (114), Expect = 2e-07
 Identities = 17/79 (21%), Positives = 24/79 (30%), Gaps = 6/79 (7%)

Query: 97  AAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRG 156
             +NEQ+  E      Y       D  N     LA   +  S +E  HAE+  +   L  
Sbjct: 11  RLLNEQLTSELTAINQYFLHSKMQD--NWGFTELAAHTRAESFDEMRHAEEITDRILLLD 68

Query: 157 GKVKLHSIMQPPSEFDHAE 175
           G        Q        +
Sbjct: 69  G----LPNYQRIGSLRIGQ 83

>3r2k_A Bacterioferritin, BFR; bacterial ferritin, iron binding, iron storage, iron homeost iron release, iron mobilization; 1.55A {Pseudomonas aeruginosa} PDB: 3r2h_A 3r2l_A 3r2m_A 3r2o_A 3r2r_A 3r2s_A Length = 154

 Score = 46.9 bits (111), Expect = 5e-07
 Identities = 12/74 (16%), Positives = 23/74 (31%), Gaps = 2/74 (2%)

Query: 97  AAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRG 156
             +N  +  E      Y      ++  +     L +      EEE +HA+  +    L  
Sbjct: 9   DYLNTLLTGELAARDQYFIHSRMYE--DWGFSKLYERLNHEMEEETQHADALLRRILLLE 66

Query: 157 GKVKLHSIMQPPSE 170
           G  ++      P  
Sbjct: 67  GTPRMRPDDIHPGT 80

>3fvb_A Bacterioferritin; niaid, ssgcid, decode, structural genomics, seattle structural genomics center for infectious disease; HET: HEM; 1.81A {Brucella melitensis biovar ABORTUS2308} Length = 182

 Score = 43.9 bits (103), Expect = 6e-06
 Identities = 17/68 (25%), Positives = 27/68 (39%), Gaps = 2/68 (2%)

Query: 100 NEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKV 159
           NE + +E      Y   Y   +  +     LAK  +E S EE  HA+K ++      G  
Sbjct: 33  NEALFLELGAVNQYWLHYRLLN--DWGYTRLAKKEREESIEEMHHADKLIDRIIFLEGFP 90

Query: 160 KLHSIMQP 167
            L ++   
Sbjct: 91  NLQTVSPL 98

>3gvy_A Bacterioferritin; iron storage, DI-iron, ferroxida activity, heme, metal binding protein; HET: HEM; 2.80A {Rhodobacter sphaeroides} Length = 161

 Score = 41.4 bits (97), Expect = 4e-05
 Identities = 15/78 (19%), Positives = 25/78 (32%), Gaps = 6/78 (7%)

Query: 100 NEQINVEYNVS--YVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGG 157
           N  +  E      Y  H        ++     +A   ++ S EE  HA+K ++     GG
Sbjct: 12  NAALRSELTAVSQYWLHYRLQ----EDWGFGSIAHKSRKESIEEMHHADKLIQRIIFLGG 67

Query: 158 KVKLHSIMQPPSEFDHAE 175
              L  +          E
Sbjct: 68  HPNLQRLNPLRIGQTLRE 85

>1nfv_A Bacterioferritin; 24 subunits in the active molecule, DIIRON HAEM Fe-coproporphyrin III cofactor, iron storage-electron complex; HET: FEC; 1.95A {Desulfovibrio desulfuricans} SCOP: a.25.1.1 PDB: 1nf6_A* 1nf4_A* Length = 179

 Score = 40.0 bits (93), Expect = 2e-04
 Identities = 13/62 (20%), Positives = 21/62 (33%), Gaps = 4/62 (6%)

Query: 111 YVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPSE 170
           Y+          D++    LA   K  + +E  HAE F E     GG+       +  + 
Sbjct: 30  YMNQHYSL----DDMDYGELAANMKLIAIDEMRHAENFAERIKELGGEPTTQKEGKVVTG 85

Query: 171 FD 172
             
Sbjct: 86  QA 87

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	212
3vnx_A	204	Ferritin; 4-helix bundle, iron storage, oxidoreduc	100.0
3a68_A	212	Sferh-4, ferritin-4, chloroplastic; 4-helix bundle	100.0
3ka8_A	176	Ferritin, middle subunit; iron storage, DIIRON, ir	100.0
3kxu_A	191	Ferritin; iron storage protein, disorder, iron, me	100.0
2cih_A	183	Ferritin heavy chain; apoferritin, ferroxidase, DI	100.0
1rcd_A	173	L ferritin; iron storage; 2.00A {Rana catesbeiana}	100.0
2v2p_A	174	Ferritin light chain; metal transport, iron, haemi	100.0
1z6o_M	191	Ferritin heavy chain; metal binding protein, iron	100.0
1z6o_A	212	Ferritin light chain; metal binding protein, iron	99.97
3e6s_A	168	Ferritin; iron storage, ferroxidase, oxidoreductas	99.97
1s3q_A	173	Ferritin; ferroxidase, four helix bundle, iron sto	99.97
3qz3_A	184	Ferritin; structural genomics, the center for stru	99.96
3uno_A	189	Probable bacterioferritin BFRB; ferroxidase activi	99.96
1eum_A	165	Ferritin 1; ECFTNA, metal binding protein; 2.05A {	99.96
1krq_A	167	Ferritin; H-chain like four-helix bundle, binding	99.96
3bvf_A	181	Ferritin; iron storage, metal-binding, oxidoreduct	99.94
4am5_A	159	Bacterioferritin; metal binding protein, ferroxida	99.93
1vlg_A	176	Ferritin; TM1128, structural genomics, JCSG, prote	99.92
2jd6_0	174	Ferritin homolog, ferritin; metal transport, iron,	99.91
3oj5_A	189	Ferritin family protein; ferroxidase, cytosol, oxi	99.88
3uoi_A	161	Bacterioferritin, BFR; structural genomics, TB str	99.84
3r2k_A	154	Bacterioferritin, BFR; bacterial ferritin, iron bi	99.84
3gvy_A	161	Bacterioferritin; iron storage, DI-iron, ferroxida	99.82
2y3q_A	158	Bacterioferritin; metal binding protein, redox; HE	99.82
3fvb_A	182	Bacterioferritin; niaid, ssgcid, decode, structura	99.82
1lko_A	191	Rubrerythrin all-iron(II) form; reduced form, DIIR	99.81
3qb9_A	174	Bacterioferritin, BFR; cytosol, structural genomic	99.81
1nfv_A	179	Bacterioferritin; 24 subunits in the active molecu	99.81
1jgc_A	161	Bacterioferritin, BFR; iron storage protein, metal	99.8
2fkz_A	155	Bacterioferritin; ferroxidase, DIIRON site, iron T	99.8
2c41_A	158	DPS family DNA-binding stress response protein; ir	99.79
1j30_A	144	144AA long hypothetical rubrerythrin; sulerythrin,	99.78
1ji5_A	142	DLP-1; dodecamer, four-helix bundle, metal transpo	99.78
2vzb_A	170	Putative bacterioferritin-related protein; DPS, DP	99.78
2qqy_A	149	Sigma B operon; dodecameric alpha-helical, ferriti	99.77
1n1q_A	149	DPS protein; four-helix bundle, unknown function;	99.77
1jig_A	146	DLP-2; dodecamer, four-helix bundle, metal transpo	99.75
2d5k_A	156	DPS, DPS family protein; four helix bundle, metal	99.74
2vxx_A	192	Starvation induced DNA binding protein; stress res	99.74
2clb_A	188	DPS-like protein; DI-iron carboxylate, hypothetica	99.68
1tjo_A	182	Iron-rich DPSA-homolog protein; ferritin, low-iron	99.53
1yuz_A	202	Nigerythrin; rubrythrin, rubredoxin, hemerythrin,	99.5
2chp_A	153	MRGA, metalloregulation DNA-binding stress protein	99.28
2fjc_A	156	Antigen TPF1; mini ferritin, iron binding protein,	99.27
1o9r_A	162	Agrobacterium tumefaciens DPS; iron-binding protei	99.27
2bk6_A	156	Non-heme iron-containing ferritin; DPS (DNA bindin	99.25
2yjk_A	161	AFP, DPS; metal-binding protein, iron uptake, ferr	99.24
2c2u_A	207	DPS, DNA-binding stress response protein; DNA-bind	99.19
2wlu_A	175	DPS-like peroxide resistance protein; DNA-binding,	99.15
2pyb_A	151	NAPA, neutrophil activating protein; ferritin, DPS	99.14
2cf7_A	165	DPR; peroxide resistance, DPS-family, ferritin-lik	99.13
2yw6_A	183	DNA protection during starvation protein; DNA-bind	99.11
2z90_A	161	Starvation-inducible DNA-binding protein or FINE t	99.11
2xgw_A	199	Peroxide resistance protein; metal binding protein	99.1
2c2j_A	211	DNA-binding stress response protein; DNA-binding p	99.08
3pwf_A	170	Rubrerythrin; non heme iron peroxidases, oxidative	99.07
3iq1_A	159	DPS family protein; csgid, SAD, niaid, metal trans	99.02
3ak8_A	167	DNA protection during starvation protein; DPS-like	99.0
3kwo_A	152	Putative bacterioferritin; alpha-helix, bacterial	98.99
4eve_A	164	Neutrophil-activating protein; dodecamer, four-hel	98.98
4di0_A	144	Rubrerythrin; ssgcid, seattle structural genomics	98.9
2oh3_A	167	Rubrerythrin, COG1633: uncharacterized conserved p	97.88
4a25_A	169	DPS, ferritin DPS family protein; metal binding pr	97.6
2fzf_A	175	Hypothetical protein; structural genomics, southea	97.41
4etr_A	153	Putative uncharacterized protein; DUF2383, domain	97.11
3qhb_A	179	Symerythrin, ORF180; four-helix bundle, carboxylat	96.78
3k6c_A	95	Uncharacterized protein NE0167; structural genomic	95.84
1zpy_A	95	Hypothetical protein NE0167; structural genomics,	95.76
3fse_A	365	Two-domain protein containing DJ-1/THIJ/PFPI-like	95.53
1zuj_A	179	Hypothetical protein llacc01001955; oxidative stre	95.35
1zs3_A	182	Lactococcus lactis Mg1363 DPSA; oxidative stress,	95.07
1vjx_A	157	Putative ferritin-like DIIRON-carboxylate protein;	94.63
4di0_A	144	Rubrerythrin; ssgcid, seattle structural genomics	92.38
2qqy_A	149	Sigma B operon; dodecameric alpha-helical, ferriti	91.78
3hl1_A	317	Ferritin like protein; structural genomics, joint	91.76
1vjx_A	157	Putative ferritin-like DIIRON-carboxylate protein;	91.59
1j30_A	144	144AA long hypothetical rubrerythrin; sulerythrin,	91.05
1o9i_A	266	Pseudocatalase; oxidoreductase, hexamer, dimangane	90.24
2e0z_A	345	Virus-like particle; bacteriophage, HK97; 3.60A {P	90.02
2fzf_A	175	Hypothetical protein; structural genomics, southea	89.93
2v8t_A	302	Manganese-containing pseudocatalase; manganese cat	88.52
3qhb_A	179	Symerythrin, ORF180; four-helix bundle, carboxylat	87.0
3uoi_A	161	Bacterioferritin, BFR; structural genomics, TB str	86.66
4am5_A	159	Bacterioferritin; metal binding protein, ferroxida	86.25
2itb_A	206	TRNA-(MS(2)IO(6)A)-hydroxylase, putative; putative	85.97
3r2k_A	154	Bacterioferritin, BFR; bacterial ferritin, iron bi	85.59
1nfv_A	179	Bacterioferritin; 24 subunits in the active molecu	84.57
2y3q_A	158	Bacterioferritin; metal binding protein, redox; HE	84.44
3qb9_A	174	Bacterioferritin, BFR; cytosol, structural genomic	84.08
3gvy_A	161	Bacterioferritin; iron storage, DI-iron, ferroxida	83.72
2fkz_A	155	Bacterioferritin; ferroxidase, DIIRON site, iron T	83.62
1jgc_A	161	Bacterioferritin, BFR; iron storage protein, metal	82.45
2oh3_A	167	Rubrerythrin, COG1633: uncharacterized conserved p	81.85

>3vnx_A Ferritin; 4-helix bundle, iron storage, oxidoreductase; 2.40A {Ulva pertusa}

Probab=100.00  E-value=9.1e-47  Score=320.89  Aligned_cols=152  Identities=50%  Similarity=0.789  Sum_probs=136.6

Q ss_pred             CccccccccchHHhhhhhhcCCCCC-ccchhcccccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHH
Q 028202           58 MPLTGVVFQPFEEVKKEVLDVPVSP-LLSLARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKE  136 (212)
Q Consensus        58 ~~~~g~~~~p~~e~~~~~~~~~~~~-~~s~~Rq~~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~  136 (212)
                      +++|||||+||+|||+++.+||++| +.|++||||+++|+++||+|||.||+|||+|++||+||+++||||+|||+||++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~rq~~~~~v~~~LN~qin~EL~As~~Ylsma~~f~~~d~~l~g~a~~f~~   81 (204)
T 3vnx_A            2 QEVTGMVFQPFSEVQGELSTVTQAPVTDSYARVEYHIECEAAINEQINIEYTISYVYHALHSYFARDNVGLPGFAKFFKE   81 (204)
T ss_dssp             ------CCCHHHHTHHHHHHHHHCCTTSCSSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTTCCHHHHHHHHH
T ss_pred             CCCCcceeccHHHHHHHHhcCCCCCCccccceecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHH
Confidence            4789999999999999999999999 679999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCeeeeccCCCCCCcCccccccccHHHHHHHHH------HHHHHHHHHHHhcCChhhhhh
Q 028202          137 SSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYGKFSGLT------AALNHLIYSISRLKSYNVILL  209 (212)
Q Consensus       137 qS~EEreHAekLieyln~RGG~V~l~~I~~P~~e~~~~e~~d~l~a~E~aLt------~~Ine~i~~~~~~kD~~~~~~  209 (212)
                      +|+|||+||++|++||++|||+|++++|++|..+|++++|++.+.+||.+|.      ..|++++..|.+.+||++...
T Consensus        82 ~s~EE~~HA~kLi~yi~~rGG~~~l~~i~~p~~~~~~~~~~~~~e~le~aL~~Ek~v~~~l~~l~~lA~~~~D~~t~~f  160 (204)
T 3vnx_A           82 ASDEEREHAHMLMDYQTKRGGRVELKPLAAPEMEFANDDKGEALYAMELALSLEKLNFQKLQALQAIADKHKDAALCDF  160 (204)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCCCCCCCCCCCCCCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCcccCCCCCCCccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCChHHHHH
Confidence            9999999999999999999999999999999999988877666676766666      478899999999999998654

>3a68_A Sferh-4, ferritin-4, chloroplastic; 4-helix bundle, iron storage, CAGE-like protein, plant, iron, metal-binding, oxidoreductase, plastid; 1.80A {Glycine max} PDB: 3a9q_A

Probab=100.00  E-value=3.2e-44  Score=306.62  Aligned_cols=156  Identities=65%  Similarity=0.925  Sum_probs=137.0

Q ss_pred             cCCCCccccccccchHHhhhhhhcCCCCCccchhcccccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHH
Q 028202           54 DANSMPLTGVVFQPFEEVKKEVLDVPVSPLLSLARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKF  133 (212)
Q Consensus        54 ~~~~~~~~g~~~~p~~e~~~~~~~~~~~~~~s~~Rq~~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkF  133 (212)
                      .++++++|||||+||+|||+++..+|..+..|++|||++++|+++||+|||.||+|+|+|++||+||+++++||+||++|
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~rq~~~~~v~~~LN~qin~El~As~~Yl~ma~~f~~~~v~l~g~a~~   83 (212)
T 3a68_A            4 STNHRALTGVIFEPFEEVKKELDLVPTVPQASLARQKYVDESESAVNEQINVEYNVSYVYHAMFAYFDRDNVALRGLAKF   83 (212)
T ss_dssp             ----------CCCHHHHHTTTTTTSCCSTTSCSSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCCHHHHHH
T ss_pred             CCCCCCcCceeeecHHHHHHHHhcCcCCCccCcccCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcccchHHHHHH
Confidence            35678999999999999999999999999999999999999999999999999999999999999999888899999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCeeeeccCCCCCCcCccccccccHHHHHHHHH------HHHHHHHHHHHhcCChhhh
Q 028202          134 FKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYGKFSGLT------AALNHLIYSISRLKSYNVI  207 (212)
Q Consensus       134 Fr~qS~EEreHAekLieyln~RGG~V~l~~I~~P~~e~~~~e~~d~l~a~E~aLt------~~Ine~i~~~~~~kD~~~~  207 (212)
                      |+++|+|||+||++|++||++|||+|++++|++|..+|++++|.+.+.+||.+|.      ..|++++..|.+.+||++.
T Consensus        84 f~~~s~EE~~HA~kl~~yi~~rGG~~~l~~i~~p~~~~~~~e~~~~~e~le~aL~~Ek~v~~~l~~l~~~A~~~~D~~t~  163 (212)
T 3a68_A           84 FKESSEEEREHAEKLMEYQNKRGGKVKLQSIVMPLSDFDHADKGDALHAMELALSLEKLTNEKLLNLHSVATKNGDVQLA  163 (212)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTCCCCCCCBCCCCCCCCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCCCccCCcCCCCCCcCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence            9999999999999999999999999999999999999988877766777766666      4789999999999999986


Q ss_pred             hh
Q 028202          208 LL  209 (212)
Q Consensus       208 ~~  209 (212)
                      .+
T Consensus       164 ~f  165 (212)
T 3a68_A          164 DF  165 (212)
T ss_dssp             HH
T ss_pred             HH
Confidence            54

>3ka8_A Ferritin, middle subunit; iron storage, DIIRON, iron, metal-binding, oxidoreductase; 1.35A {Rana catesbeiana} SCOP: a.25.1.1 PDB: 3ka9_A 3ka3_A 1mfr_A 3ka4_A 3rbc_A 3re7_A 3rgd_A 4das_A* 3ka6_A 3shx_A 3sh6_A 3se1_A 1bg7_A

Probab=100.00  E-value=2.1e-35  Score=244.71  Aligned_cols=126  Identities=42%  Similarity=0.653  Sum_probs=117.4

Q ss_pred             cchhcccccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeecc
Q 028202           84 LSLARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHS  163 (212)
Q Consensus        84 ~s~~Rq~~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~  163 (212)
                      +|++||||+++|+++||+|||.||+|||+|++||+||++++|||+|||+||+++|+|||+||++|++||++|||+|++++
T Consensus         2 ~~~~rqn~~~~v~~~LN~qin~El~As~~Yl~ma~~f~~~d~~l~g~a~~f~~~s~EE~~HA~kl~~~i~~rgg~~~l~~   81 (176)
T 3ka8_A            2 VSQVRQNYHSDCEAAVNRMLNLELYASYTYSSMYAFFDRDDVALHNVAEFFKEHSHEEREHAEKFMKYQNKRGGRVVLQD   81 (176)
T ss_dssp             CCTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCC
T ss_pred             CCccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeeeCc
Confidence            48999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCC-CCcCcccc-ccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhh
Q 028202          164 IMQP-PSEFDHAE-KGDALYGKFSGLTAALNHLIYSISRLKSYNVILL  209 (212)
Q Consensus       164 I~~P-~~e~~~~e-~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~  209 (212)
                      |++| ..+|.++. .+.....+|+.++..|++++..|.+.+|+++..+
T Consensus        82 i~~p~~~~~~~~~e~le~aL~~Ek~v~~~l~~l~~la~~~~D~~t~~f  129 (176)
T 3ka8_A           82 IKKPERDEWGNTLEAMQAALQLEKTVNQALLDLHKLATDKVDPHLCDF  129 (176)
T ss_dssp             CCCCSCSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred             ccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHHH
Confidence            9999 66787764 3677777888888899999999999999998654

>3kxu_A Ferritin; iron storage protein, disorder, iron, metal binding protein; 1.85A {Homo sapiens} PDB: 3hx2_A 3hx5_A 3hx7_A

Probab=100.00  E-value=2.8e-35  Score=247.97  Aligned_cols=126  Identities=34%  Similarity=0.488  Sum_probs=117.5

Q ss_pred             cchhcccccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeecc
Q 028202           84 LSLARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHS  163 (212)
Q Consensus        84 ~s~~Rq~~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~  163 (212)
                      +|++||||+++|+++||+|||.||+|||+|++||+||++++|||+|||+||+++|+|||+||++|++||++|||+|++++
T Consensus         2 ~s~~rqn~~~~v~~~LN~qin~EL~As~~Ylsma~~f~~~d~~l~g~a~~f~~~s~EE~~HA~kl~~yi~~rgG~~~l~~   81 (191)
T 3kxu_A            2 SSQIRQNYSTDVEAAVNSLVNLYLQASYTYLSLGFYFDRDDVALEGVSHFFRELAEEKREGYERLLKMQNQRGGRALFQD   81 (191)
T ss_dssp             CCTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCC
T ss_pred             CCccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCC
Confidence            48999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCC-cCcccc-ccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhh
Q 028202          164 IMQPPS-EFDHAE-KGDALYGKFSGLTAALNHLIYSISRLKSYNVILL  209 (212)
Q Consensus       164 I~~P~~-e~~~~e-~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~  209 (212)
                      |++|.. +|.++. .+.....+|+.++..|++++..|.+.+||++...
T Consensus        82 i~~p~~~~~~s~~e~le~aL~~Ek~v~~~l~~l~~la~~~~D~~t~~f  129 (191)
T 3kxu_A           82 IKKPAEDEWGKTPDAMKAAMALEKKLNQALLDLHALGSARTDPHLCDF  129 (191)
T ss_dssp             CCCCSCSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred             cCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHH
Confidence            999994 888764 3677778888888899999999999999998654

>2cih_A Ferritin heavy chain; apoferritin, ferroxidase, DI-iron non-heme protein, iron storage, iron, metal-binding, oxidoreductase, phosphorylation; 1.5A {Homo sapiens} PDB: 2chi_A 2cei_A 1fha_A 2fha_A 2cn7_A 2iu2_A 2clu_A 2cn6_A 3ajo_A 3ajq_A 3ajp_A 3erz_A 3es3_A 2z6m_A 1r03_A

Probab=100.00  E-value=2.2e-34  Score=239.95  Aligned_cols=129  Identities=36%  Similarity=0.544  Sum_probs=117.2

Q ss_pred             CCccchhcccccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeee
Q 028202           81 SPLLSLARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVK  160 (212)
Q Consensus        81 ~~~~s~~Rq~~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~  160 (212)
                      .++.|++|||++++|+++||+|||.||+|+|+|++||+||++++|||+||++||+++|+|||+||++|++||++|||+|+
T Consensus         3 ~~~~s~~rq~~~~~~~~~LN~qi~~El~As~~Yl~~a~~~~~~d~~l~g~a~~f~~~s~EE~~HA~kl~~~i~~rgg~~~   82 (183)
T 2cih_A            3 TASTSQVRQNYHQDSEAAINRQINLDLYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIF   82 (183)
T ss_dssp             ---CCTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred             CCccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccc
Confidence            34568999999999999999999999999999999999999988999999999999999999999999999999999999


Q ss_pred             eccCCCCCCc-Ccccc-ccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhh
Q 028202          161 LHSIMQPPSE-FDHAE-KGDALYGKFSGLTAALNHLIYSISRLKSYNVILL  209 (212)
Q Consensus       161 l~~I~~P~~e-~~~~e-~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~  209 (212)
                      +++|++|..+ |.++. .+.....+|+.++..|++++..|.+.+||++..+
T Consensus        83 l~~i~~p~~~~~~~~~e~le~aL~~Ek~v~~~l~~l~~~a~~~~D~~t~~f  133 (183)
T 2cih_A           83 LQDIQKPDCDDWESGLNAMECALHLEKNVNQSLLELHKLATDKNDPHLCDF  133 (183)
T ss_dssp             CCCCCCCSCSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred             cCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence            9999999754 77653 4777788888888899999999999999998654

>1rcd_A L ferritin; iron storage; 2.00A {Rana catesbeiana} SCOP: a.25.1.1 PDB: 1rcg_A 1rci_A 1rcc_A 1rce_A

Probab=100.00  E-value=3.2e-34  Score=236.41  Aligned_cols=126  Identities=37%  Similarity=0.614  Sum_probs=117.3

Q ss_pred             cchhcccccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeecc
Q 028202           84 LSLARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHS  163 (212)
Q Consensus        84 ~s~~Rq~~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~  163 (212)
                      .|++|||++++|+++||+|||.||+|+|+|++||+||++++|||+|||+||+++|+|||+||++|++||++|||+|++++
T Consensus         2 ~~~~rqn~~~~v~~~LN~qi~~El~as~~Yl~~a~~~~~~~~~l~g~a~~f~~~s~EE~~HA~~l~~~i~~rgg~~~l~~   81 (173)
T 1rcd_A            2 ESQVRQNFHQDCEAGLNRTVNLKFHSSYVYLSMASYFNRDDVALSNFAKFFRERSEEEKEHAEKLIEYQNQRGGRVFLQS   81 (173)
T ss_dssp             -CTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCC
T ss_pred             CCcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeecCC
Confidence            48999999999999999999999999999999999999988999999999999999999999999999999999999999


Q ss_pred             CCCC-CCcCcccc-ccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhh
Q 028202          164 IMQP-PSEFDHAE-KGDALYGKFSGLTAALNHLIYSISRLKSYNVILL  209 (212)
Q Consensus       164 I~~P-~~e~~~~e-~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~  209 (212)
                      |++| ..+|.++. .+.....+|+.++..|++++..|.+.+|+++..+
T Consensus        82 i~~p~~~~~~~~~e~le~aL~~E~~v~~~l~~l~~~a~~~~D~~t~~f  129 (173)
T 1rcd_A           82 VEKPERDDWANGLEALQTALKLQKSVNQALLDLHAVAADKSDPHMTDF  129 (173)
T ss_dssp             CCCCSCSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred             CCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence            9999 78887653 4777788888888899999999999999998654

>2v2p_A Ferritin light chain; metal transport, iron, haemin, apoferritin, iron storage, metal-binding; 1.15A {Equus caballus} PDB: 2v2r_A 2v2m_A 2v2l_A 2v2s_A 2v2o_A 2v2n_A 2za6_A 2v2j_A 2v2i_A 2z5p_A 1dat_A 2g4h_A 1aew_A 3h7g_A 2zg9_X 2zg8_X 3fi6_A 3o7r_A 2w0o_A 1hrs_A* ...

Probab=100.00  E-value=3.1e-34  Score=236.68  Aligned_cols=125  Identities=31%  Similarity=0.460  Sum_probs=117.5

Q ss_pred             chhcccccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccC
Q 028202           85 SLARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSI  164 (212)
Q Consensus        85 s~~Rq~~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I  164 (212)
                      |++||||+++|+++||+|||.||+|+|+|++||+||++++|||+|||+||+++|+|||+||++|++||++|||+|++++|
T Consensus         2 ~~~~qn~~~~v~~~LN~qi~~El~as~~Yl~~a~~~~~~~~~l~g~a~~f~~~s~EE~~HA~~l~~~i~~rgg~~~l~~i   81 (174)
T 2v2p_A            2 SQIRQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVCHFFRQLAQQKMQGAERLLKMQNQRGGRALFQDL   81 (174)
T ss_dssp             CCSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCC
T ss_pred             CcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCC
Confidence            78999999999999999999999999999999999998889999999999999999999999999999999999999999


Q ss_pred             CCC-CCcCcccc-ccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhh
Q 028202          165 MQP-PSEFDHAE-KGDALYGKFSGLTAALNHLIYSISRLKSYNVILL  209 (212)
Q Consensus       165 ~~P-~~e~~~~e-~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~  209 (212)
                      ++| ..+|.++. .+.....+|+.++..|++++..|.+.+|+++..+
T Consensus        82 ~~p~~~~~~~~~e~le~aL~~Ek~v~~~l~~l~~~a~~~~D~~t~~f  128 (174)
T 2v2p_A           82 QKPSQDEWGTTPDAMKAAIVLEKSLNQALLDLHALGSAQADPHLCDF  128 (174)
T ss_dssp             CCCSCSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred             CCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence            999 88887763 4777788888888899999999999999998764

>1z6o_M Ferritin heavy chain; metal binding protein, iron storage; 1.91A {Trichoplusia NI} SCOP: a.25.1.1

Probab=100.00  E-value=2.1e-33  Score=235.61  Aligned_cols=125  Identities=25%  Similarity=0.372  Sum_probs=114.7

Q ss_pred             ccchhcccccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCee---
Q 028202           83 LLSLARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKV---  159 (212)
Q Consensus        83 ~~s~~Rq~~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V---  159 (212)
                      ..|++||+++++|+++||+|||.||+|||+|++||+||++++|||+|||+||+++|+|||+||++|++||++|||+|   
T Consensus         9 ~~~~~~~~~~~~~~~~LN~qin~El~As~~Yl~ma~~f~~~~~~l~g~a~~f~~~s~EE~~HA~kli~yi~~rGg~~~~~   88 (191)
T 1z6o_M            9 QIPKDWITMHRSCRNSMRQQIQMEVGASLQYLAMGAHFSKDVVNRPGFAQLFFDAASEEREHAMKLIEYLLMRGELTNDV   88 (191)
T ss_dssp             CCCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSCC
T ss_pred             cCcHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCcccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcchh
Confidence            35899999999999999999999999999999999999998899999999999999999999999999999999999   


Q ss_pred             -eeccCCCCC-CcCcccc-ccccHHHHHHHHHHHHHHHHHHHHhcCChhhh
Q 028202          160 -KLHSIMQPP-SEFDHAE-KGDALYGKFSGLTAALNHLIYSISRLKSYNVI  207 (212)
Q Consensus       160 -~l~~I~~P~-~e~~~~e-~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~  207 (212)
                       ++++|++|. .+|.++. .+.....+|+.++..|++++..|.+.+||.+.
T Consensus        89 ~~l~~i~~p~~~~~~~~~e~le~aL~~Ek~v~~~i~~l~~~a~~~~D~~d~  139 (191)
T 1z6o_M           89 SSLLQVRPPTRSSWKGGVEALEHALSMESDVTKSIRNVIKACEDDSEFNDY  139 (191)
T ss_dssp             GGGCCCCCCSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCH
T ss_pred             hhhhcCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCCH
Confidence             999999996 6777653 47777888888888999999999999777654

>1z6o_A Ferritin light chain; metal binding protein, iron storage; 1.91A {Trichoplusia NI} SCOP: a.25.1.1

Probab=99.97  E-value=2e-31  Score=227.50  Aligned_cols=124  Identities=15%  Similarity=0.150  Sum_probs=109.7

Q ss_pred             hhcccccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccCC
Q 028202           86 LARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIM  165 (212)
Q Consensus        86 ~~Rq~~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I~  165 (212)
                      ..+.+.+++|+++||+|||.||+|||+|++||+||++++|||+|||+||+++|+|||+||++||+||++|||+|++++|+
T Consensus        28 ~~~~~~~~~v~~~LN~qin~El~As~~Yl~ma~~f~~dd~~l~gfa~~f~~~s~EE~~HA~kli~yi~~rGg~~~l~~i~  107 (212)
T 1z6o_A           28 YGEYGSHGNVATELQAYAKLHLERSYDYLLSAAYFNNYQTNRAGFSKLFKKLSDEAWSKTIDIIKHVTKRGDKMNFDQHS  107 (212)
T ss_dssp             CTTTTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCTTCCC
T ss_pred             ccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccccccc
Confidence            44557899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCC-CcCccc------cccccHHHHHHHHHHHHHHHHHHHHhcC----Chhhhhh
Q 028202          166 QPP-SEFDHA------EKGDALYGKFSGLTAALNHLIYSISRLK----SYNVILL  209 (212)
Q Consensus       166 ~P~-~e~~~~------e~~d~l~a~E~aLt~~Ine~i~~~~~~k----D~~~~~~  209 (212)
                      +|. .+|.+.      +.+...+.+|+.++..|++++..|.+.+    ||++..+
T Consensus       108 ~p~~~~~~~~~~~~~~e~le~aL~~Ek~vt~~l~~l~~~a~~~~~~~~D~~t~~f  162 (212)
T 1z6o_A          108 TMKTERKNYTAENHELEALAKALDTQKELAERAFYIHREATRNSQHLHDPEIAQY  162 (212)
T ss_dssp             CSCCCCCCCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTCCCHHHHHH
T ss_pred             cccccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHH
Confidence            996 777762      2355555566666668999999999999    9998654

>3e6s_A Ferritin; iron storage, ferroxidase, oxidoreductase; 1.95A {Pseudo-nitzschia multiseries} SCOP: a.25.1.1 PDB: 3e6r_A

Probab=99.97  E-value=1.2e-30  Score=214.93  Aligned_cols=116  Identities=25%  Similarity=0.400  Sum_probs=106.8

Q ss_pred             cHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccCCCCC--C
Q 028202           92 EDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPP--S  169 (212)
Q Consensus        92 s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I~~P~--~  169 (212)
                      +++|+++||+|||.||+|||+|++||+||+++  +|+|||+||+++|+|||+||++|++||++|||+|++++|++|.  .
T Consensus         2 ~~~v~~~LN~qin~El~As~~Yl~ma~~f~~~--~l~g~a~~f~~~s~EE~~HA~kl~~~i~~rgg~~~l~~i~~p~~~~   79 (168)
T 3e6s_A            2 SEELLDLFNRQVTQEFTASQVYLSASIWFDQN--DWEGMAAYMLAESAEEREHGLGFVDFANKRNIPIELQAVPAPVSCA   79 (168)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCGGG
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCcC--CchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCcCCCCccc
Confidence            68999999999999999999999999999954  8999999999999999999999999999999999999999998  6


Q ss_pred             cCcccc-ccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhh
Q 028202          170 EFDHAE-KGDALYGKFSGLTAALNHLIYSISRLKSYNVILL  209 (212)
Q Consensus       170 e~~~~e-~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~  209 (212)
                      +|.++. .+.....+|+.++..|++++..|.+.+|+++...
T Consensus        80 ~~~~~~e~le~aL~~Ek~v~~~l~~l~~la~~~~D~~t~~f  120 (168)
T 3e6s_A           80 EWSSPEDVWQSILELEQANTRSLLNLAEAASTCHDFAVMAF  120 (168)
T ss_dssp             TCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHhHHHH
Confidence            888764 3677778888888899999999999999998654

>1s3q_A Ferritin; ferroxidase, four helix bundle, iron storage, metal binding; 2.10A {Archaeoglobus fulgidus} SCOP: a.25.1.1 PDB: 1sq3_A 3kx9_A

Probab=99.97  E-value=3.4e-30  Score=212.53  Aligned_cols=118  Identities=29%  Similarity=0.515  Sum_probs=110.3

Q ss_pred             cccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccCCCCCC
Q 028202           90 KYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPS  169 (212)
Q Consensus        90 ~~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I~~P~~  169 (212)
                      +++++|+++||+|||.|++|+|+|++||+||+  +|||+|||+||+++|+|||+||++|++||++|||+|++++|++|..
T Consensus         3 m~~~~v~~~LN~qi~~El~as~~Yl~~a~~~~--~~~l~g~a~~f~~~a~EE~~HA~~l~~~i~~~gg~~~l~~i~~p~~   80 (173)
T 1s3q_A            3 SISEKMVEALNRQINAEIYSAYLYLSMASYFD--SIGLKGFSNWMRVQWQEELMHAMKMFDFVSERGGRVKLYAVEEPPS   80 (173)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCC
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--HcChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCCCC
Confidence            58899999999999999999999999999999  5899999999999999999999999999999999999999999999


Q ss_pred             cCcccc-ccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhh
Q 028202          170 EFDHAE-KGDALYGKFSGLTAALNHLIYSISRLKSYNVILL  209 (212)
Q Consensus       170 e~~~~e-~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~  209 (212)
                      +|.++. .+.....+|+.++..|++++..|.+.+|+++..+
T Consensus        81 ~~~~~~e~le~aL~~E~~v~~~~~~l~~~a~~~~D~~t~~f  121 (173)
T 1s3q_A           81 EWDSPLAAFEHVYEHEVNVTKRIHELVEMAMQEKDFATYNF  121 (173)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHH
Confidence            987763 4777888888888899999999999999998754

>3qz3_A Ferritin; structural genomics, the center for structural genomics of I diseases, csgid, cytoplasmic, oxidoreductase; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: a.25.1.1

Probab=99.96  E-value=1.6e-29  Score=210.97  Aligned_cols=120  Identities=22%  Similarity=0.319  Sum_probs=110.7

Q ss_pred             cccccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccCCCC
Q 028202           88 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQP  167 (212)
Q Consensus        88 Rq~~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I~~P  167 (212)
                      ..+++++|+++||+|||.||+|+|+|++|++||+  +|||+||++||+++|+|||+||++|++||++|||+|.+++|++|
T Consensus         8 ~~m~~~~v~~~LN~qin~EL~as~~Yl~~a~~f~--~~~l~g~a~~f~~~a~EE~~HA~~l~~~i~~~Gg~~~l~~i~~p   85 (184)
T 3qz3_A            8 FFMLSQAMVEHLNEQINLEFFSSNLYLQMSAWCE--DKGFDGAAEFLRAHAVEEMQHMQRLFTYVSETGALPILGAIAAP   85 (184)
T ss_dssp             -CCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCC
T ss_pred             eeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hcChHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcccCCCCCc
Confidence            3479999999999999999999999999999999  79999999999999999999999999999999999999999999


Q ss_pred             CCcCcccc-ccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhh
Q 028202          168 PSEFDHAE-KGDALYGKFSGLTAALNHLIYSISRLKSYNVILL  209 (212)
Q Consensus       168 ~~e~~~~e-~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~  209 (212)
                      ..+|.++. .+.....+|+.++..|++++..|.+.+|+++..+
T Consensus        86 ~~~~~~~~e~le~aL~~Ek~v~~~l~~l~~la~~~~D~~t~~f  128 (184)
T 3qz3_A           86 RHDFASLGEVFRETYQHEQKITQQINKLAHVAFTSQDYSTFNF  128 (184)
T ss_dssp             CCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred             ccCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHhHHHH
Confidence            98887764 4777788888888899999999999999998654

>3uno_A Probable bacterioferritin BFRB; ferroxidase activity, iron storage, oxidoreductase; 2.50A {Mycobacterium tuberculosis} PDB: 3oj5_A 3qd8_A

Probab=99.96  E-value=1.3e-29  Score=212.77  Aligned_cols=118  Identities=22%  Similarity=0.238  Sum_probs=108.0

Q ss_pred             cccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccCCCCCC
Q 028202           90 KYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPS  169 (212)
Q Consensus        90 ~~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I~~P~~  169 (212)
                      +++++|+++||+|||.|++|+|+|++||+||+  ++||+|||+||+++|+|||+||++|++||++|||+|++++|++|..
T Consensus         6 ~~~~~v~~~LN~qi~~El~As~~Yl~~a~~f~--~~~l~g~a~~f~~~A~EE~~HA~~l~~~i~~rGG~~~l~~i~~p~~   83 (189)
T 3uno_A            6 GPKTKFHALMQEQIHNEFTAAQQYVAIAVYFD--SEDLPQLAKHFYSQAVEERNHAMMLVQHLLDRDLRVEIPGVDTVRN   83 (189)
T ss_dssp             --CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--cCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCCCCCc
Confidence            67899999999999999999999999999999  5589999999999999999999999999999999999999999999


Q ss_pred             cCcccc-ccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhh
Q 028202          170 EFDHAE-KGDALYGKFSGLTAALNHLIYSISRLKSYNVILL  209 (212)
Q Consensus       170 e~~~~e-~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~  209 (212)
                      +|.++. .+.....+|+.++..|++++..|.+.+|+++..+
T Consensus        84 ~~~s~~e~le~aL~~Ek~v~~~l~~l~~la~~~~D~~t~~f  124 (189)
T 3uno_A           84 QFDRPREALALALDQERTVTDQVGRLTAVARDEGDFLGEQF  124 (189)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence            988764 4777788888888899999999999999998654

>1eum_A Ferritin 1; ECFTNA, metal binding protein; 2.05A {Escherichia coli} SCOP: a.25.1.1

Probab=99.96  E-value=3.7e-29  Score=203.73  Aligned_cols=118  Identities=20%  Similarity=0.349  Sum_probs=109.0

Q ss_pred             cccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccCCCCCC
Q 028202           90 KYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPS  169 (212)
Q Consensus        90 ~~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I~~P~~  169 (212)
                      +++++|+++||+|||.|++|+|+|++||+||+  +|||+|||+||+++|+|||+||++|++||++|||+|++++|++|..
T Consensus         1 m~~~~~~~~LN~~i~~El~A~~~Yl~~a~~~~--~~gl~~~a~~f~~~a~eE~~HA~~l~~~i~~~gg~~~l~~i~~p~~   78 (165)
T 1eum_A            1 MLKPEMIEKLNEQMNLELYSSLLYQQMSAWCS--YHTFEGAAAFLRRHAQEEMTHMQRLFDYLTDTGNLPRINTVESPFA   78 (165)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCC
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCCCC
Confidence            47899999999999999999999999999999  6899999999999999999999999999999999999999999999


Q ss_pred             cCcccc-ccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhh
Q 028202          170 EFDHAE-KGDALYGKFSGLTAALNHLIYSISRLKSYNVILL  209 (212)
Q Consensus       170 e~~~~e-~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~  209 (212)
                      +|+++. .+.....+|+.++..|++++..|.+++|+++..+
T Consensus        79 ~~~~~~e~l~~al~~E~~~~~~~~~l~~~a~~~~D~~~~~f  119 (165)
T 1eum_A           79 EYSSLDELFQETYKHEQLITQKINELAHAAMTNQDYPTFNF  119 (165)
T ss_dssp             CCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHH
Confidence            987763 4777788888888899999999999999988654

>1krq_A Ferritin; H-chain like four-helix bundle, binding protein; 2.70A {Campylobacter jejuni} SCOP: a.25.1.1

Probab=99.96  E-value=2.1e-28  Score=199.89  Aligned_cols=118  Identities=25%  Similarity=0.377  Sum_probs=109.0

Q ss_pred             cccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccCCCCCC
Q 028202           90 KYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPS  169 (212)
Q Consensus        90 ~~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I~~P~~  169 (212)
                      +++++|+++||+|||.|++|+|+|++||.||+  ++||+||++||+++|+|||+||++|++||++|||+|++++|++|..
T Consensus         1 m~~~~~~~~Ln~~i~~El~A~~~Yl~~a~~~~--~~gl~~~a~~f~~~a~eE~~HA~~l~~~i~~~gG~~~l~~i~~p~~   78 (167)
T 1krq_A            1 MLSKEVVKLLNEQINKEMYAANLYLSMSSWCY--ENSLDGAGAFLFAHASEESDHAKKLITYLNETDSHVELQEVKQPEQ   78 (167)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCCCCCCC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--HcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCCCC
Confidence            47899999999999999999999999999999  5799999999999999999999999999999999999999999998


Q ss_pred             cCccc-cccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhh
Q 028202          170 EFDHA-EKGDALYGKFSGLTAALNHLIYSISRLKSYNVILL  209 (212)
Q Consensus       170 e~~~~-e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~  209 (212)
                      +|+++ +.+.....+|..++..|++++..|.+.+|+++..+
T Consensus        79 ~~~~~~e~l~~al~~E~~~~~~~~~l~~~a~~~~D~~~~~~  119 (167)
T 1krq_A           79 NFKSLLDVFEKTYEHEQFITKSINTLVEHMLTHKDYSTFNF  119 (167)
T ss_dssp             CCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred             CcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHH
Confidence            88776 34777788888888899999999999999998654

>4am5_A Bacterioferritin; metal binding protein, ferroxidase centre, iron storage, DI centre, iron channel, heme binding; HET: HEM; 1.58A {Blastochloris viridis} PDB: 4am2_A* 4am4_A*

Probab=99.93  E-value=1.4e-25  Score=180.81  Aligned_cols=117  Identities=18%  Similarity=0.146  Sum_probs=107.0

Q ss_pred             cccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccCCCCCC
Q 028202           90 KYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPS  169 (212)
Q Consensus        90 ~~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I~~P~~  169 (212)
                      +.+++++++||+||+.|++|+++|++||.||+  ++|++|+++||+++|.|||+||++|++|++++||.|+++++++|..
T Consensus         2 k~~~kvi~~LN~~l~~El~A~~~Y~~~a~~~~--~~g~~~~a~~f~~~a~eE~~HA~~l~~~i~~lGG~p~~~~~~~~~~   79 (159)
T 4am5_A            2 KGDQKVIEYLNRGLRSELTAVSQYWLHYRMLE--DWGYKDLAKKWRAESIEEMAHADKFVERILFLEGLPNLQTLDPLRI   79 (159)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSBCCCCCC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcccccccccc
Confidence            36799999999999999999999999999999  7899999999999999999999999999999999999999987765


Q ss_pred             cCccc-cccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhh
Q 028202          170 EFDHA-EKGDALYGKFSGLTAALNHLIYSISRLKSYNVILL  209 (212)
Q Consensus       170 e~~~~-e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~  209 (212)
                       ++++ +.+.....+|..++..|++++..|.+.+|+.+..+
T Consensus        80 -~~~~~e~l~~~l~~E~~~~~~~~~~~~~a~~~~D~~t~~~  119 (159)
T 4am5_A           80 -GQTVKEVLESDLAAEREARALYQEGAAYAASVGDFPSKNL  119 (159)
T ss_dssp             -CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred             -chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
Confidence             4444 45777888999999999999999999999998764

>1vlg_A Ferritin; TM1128, structural genomics, JCSG, protein structu initiative, PSI, joint center for structural genomics, META protein; 2.00A {Thermotoga maritima} SCOP: a.25.1.1 PDB: 1z4a_A*

Probab=99.92  E-value=3.3e-25  Score=181.84  Aligned_cols=118  Identities=30%  Similarity=0.490  Sum_probs=110.4

Q ss_pred             cccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccCCCCCC
Q 028202           90 KYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPS  169 (212)
Q Consensus        90 ~~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I~~P~~  169 (212)
                      +++++++++||+||+.|++|+|+|++|+.||+  ++|++|+++||+++|+||++||++|++||+.|||.|.+++|++|..
T Consensus        15 ~~~~~~~~~Ln~~l~~El~a~~~Yl~~a~~~~--~~~~~~la~~f~~~a~EE~~HAd~l~eri~~lGg~~~l~~i~~p~~   92 (176)
T 1vlg_A           15 VISEKVRKALNDQLNREIYSSYLYLSMATYFD--AEGFKGFAHWMKKQAQEELTHAMKFYEYIYERGGRVELEAIEKPPS   92 (176)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCC
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeecCCCCCCCC
Confidence            68999999999999999999999999999999  6799999999999999999999999999999999999999999998


Q ss_pred             cCccc-cccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhh
Q 028202          170 EFDHA-EKGDALYGKFSGLTAALNHLIYSISRLKSYNVILL  209 (212)
Q Consensus       170 e~~~~-e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~  209 (212)
                      +|.++ +.+.....+|..++..|++++..|.+.+|++|.-+
T Consensus        93 ~~~~~~e~le~~l~~E~~v~~~~~~l~~~A~~~~D~~t~~~  133 (176)
T 1vlg_A           93 NWNGIKDAFEAALKHEEFVTQSIYNILELASEEKDHATVSF  133 (176)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHhHHHH
Confidence            88765 45777888888888999999999999999998754

>2jd6_0 Ferritin homolog, ferritin; metal transport, iron, pores, archaeon, entry channels, thermostability, hyperthermophIle, ferroxidase center; 2.75A {Pyrococcus furiosus} PDB: 2jd7_0 2jd8_0 2x17_0

Probab=99.91  E-value=8.4e-24  Score=171.96  Aligned_cols=118  Identities=30%  Similarity=0.505  Sum_probs=108.8

Q ss_pred             cccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccCCCCCC
Q 028202           90 KYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPS  169 (212)
Q Consensus        90 ~~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I~~P~~  169 (212)
                      +++++++++||+||+.|++++|+|++|+.||+  +++++|+++||+++++||++||++|++||++|||+|.+++|+.|..
T Consensus         1 m~~~~~~~~Ln~~l~~El~a~~~Yl~~a~~~~--~~~~~~l~~~f~~~a~ee~~had~laeri~~lGg~p~~~~i~~~~~   78 (174)
T 2jd6_0            1 MLSERMLKALNDQLNRELYSAYLYFAMAAYFE--DLGLEGFANWMKAQAEEEIGHALRFYNYIYDRNGRVELDEIPKPPK   78 (174)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hCCchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCc
Confidence            36889999999999999999999999999998  5799999999999999999999999999999999999999999988


Q ss_pred             cCccc-cccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhh
Q 028202          170 EFDHA-EKGDALYGKFSGLTAALNHLIYSISRLKSYNVILL  209 (212)
Q Consensus       170 e~~~~-e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~  209 (212)
                      +|.+. +.+......|..++..|++++..|.+.+|+++..+
T Consensus        79 ~~~~~~e~l~~~l~~E~~~~~~~~~~~~~A~~~~D~~t~~~  119 (174)
T 2jd6_0           79 EWESPLKAFEAAYEHEKFISKSIYELAALAEEEKDYSTRAF  119 (174)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred             CcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHhHHHH
Confidence            87665 44777888888888899999999999999998754

>3oj5_A Ferritin family protein; ferroxidase, cytosol, oxidoreductase; 2.85A {Mycobacterium tuberculosis} PDB: 3qd8_A

Probab=99.88  E-value=1.4e-22  Score=167.87  Aligned_cols=119  Identities=23%  Similarity=0.250  Sum_probs=107.9

Q ss_pred             cccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccCCCCCC
Q 028202           90 KYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPS  169 (212)
Q Consensus        90 ~~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I~~P~~  169 (212)
                      +++++++++||+||+.|+.++|+|+.|+.||+  ++|++|+++||+++++||++||++|++||+.|||.|.++.|+.|..
T Consensus         6 m~~~~v~~~LN~~la~El~a~~~Yl~~a~~~~--~~gf~~l~~~f~~~a~ee~~Had~laeri~~lGg~p~~~~i~~~~~   83 (189)
T 3oj5_A            6 GPKTKFHALMQEQIHNEFTAAQQYVAIAVYFD--SEDLPQLAKHFYSQAVEERNHAMMLVQHLLDRDLRVEIPGVDTVRN   83 (189)
T ss_dssp             --CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCC
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeecCCCCCCCC
Confidence            57889999999999999999999999999998  5589999999999999999999999999999999999999999998


Q ss_pred             cCccc-cccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhhh
Q 028202          170 EFDHA-EKGDALYGKFSGLTAALNHLIYSISRLKSYNVILLV  210 (212)
Q Consensus       170 e~~~~-e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~~  210 (212)
                      +|.+. +.+......|..++..|++++..|.+.+|+.+..++
T Consensus        84 ~~~~~~e~l~~~l~~E~~~~~~~~~l~~~A~~~~D~~t~~~l  125 (189)
T 3oj5_A           84 QFDRPREALALALDQERTVTDQVGRLTAVARDEGDFLGEQFM  125 (189)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHhHHHHH
Confidence            88554 457778888888889999999999999999987653

>3uoi_A Bacterioferritin, BFR; structural genomics, TB structural genomics consortium, TBSG ferroxidation and iron storage, cytosol; HET: HEM; 1.90A {Mycobacterium tuberculosis} PDB: 3uof_A* 3qb9_A* 2wtl_A* 3bkn_A*

Probab=99.84  E-value=1.6e-20  Score=149.62  Aligned_cols=117  Identities=19%  Similarity=0.087  Sum_probs=105.5

Q ss_pred             ccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccCCCCCCc
Q 028202           91 YEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPSE  170 (212)
Q Consensus        91 ~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I~~P~~e  170 (212)
                      .+++++++||+||+.|+.++++|++|+.||+  +++++++++||+++++||++||++|++|++.+||.|.++.+.+|+.+
T Consensus         5 ~~~~~~~~Ln~~la~E~~a~~~Y~~~a~~~~--~~~~~~l~~~f~~~a~ee~~Had~l~e~i~~lGg~p~~~~~~~~~~~   82 (161)
T 3uoi_A            5 GDPDVLRLLNEQLTSELTAINQYFLHSKMQD--NWGFTELAAHTRAESFDEMRHAEEITDRILLLDGLPNYQRIGSLRIG   82 (161)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCCCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCCCCCCCCCC
Confidence            5789999999999999999999999999998  67999999999999999999999999999999999999999888776


Q ss_pred             CccccccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhh
Q 028202          171 FDHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILL  209 (212)
Q Consensus       171 ~~~~e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~  209 (212)
                      .+..+.+......|..++..|++++..|.+.+|+.+..+
T Consensus        83 ~~~~e~l~~~l~~E~~~~~~~~~~~~~A~~~~D~~t~~~  121 (161)
T 3uoi_A           83 QTLREQFEADLAIEYDVLNRLKPGIVMCREKQDTTSAVL  121 (161)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
Confidence            433344666777888888899999999999999998654

>3r2k_A Bacterioferritin, BFR; bacterial ferritin, iron binding, iron storage, iron homeost iron release, iron mobilization; 1.55A {Pseudomonas aeruginosa} SCOP: a.25.1.0 PDB: 3r2h_A 3r2l_A 3r2m_A 3r2o_A 3r2r_A 3r2s_A

Probab=99.84  E-value=1.6e-20  Score=148.81  Aligned_cols=116  Identities=16%  Similarity=0.084  Sum_probs=101.8

Q ss_pred             ccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccCCCCCCc
Q 028202           91 YEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPSE  170 (212)
Q Consensus        91 ~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I~~P~~e  170 (212)
                      .+++++++||+||+.|+.++++|++|+.||+  +++++|+++||+++++||++||++|++|++.+||.|.+ ++.++...
T Consensus         3 ~~~~~~~~Ln~~la~E~~a~~~Y~~~a~~~~--~~~~~~l~~~f~~~a~ee~~had~l~eri~~lGg~p~~-~~~~~~~~   79 (154)
T 3r2k_A            3 GHPEVIDYLNTLLTGELAARDQYFIHSRMYE--DWGFSKLYERLNHEMEEETQHADALLRRILLLEGTPRM-RPDDIHPG   79 (154)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCC-CCCCCCCC
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCC-CCCCCCCC
Confidence            5789999999999999999999999999998  77999999999999999999999999999999999999 77755432


Q ss_pred             CccccccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhh
Q 028202          171 FDHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILL  209 (212)
Q Consensus       171 ~~~~e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~  209 (212)
                      .+..+.+......|..++..|++++..|.+.+|+.+..+
T Consensus        80 ~~~~e~l~~~l~~E~~~~~~~~~~~~~a~~~~D~~t~~~  118 (154)
T 3r2k_A           80 TTVPEMLEADLKLERHVRAALAKGIALCEQHKDFVSRDI  118 (154)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
Confidence            222344666777888888899999999999999998654

>3gvy_A Bacterioferritin; iron storage, DI-iron, ferroxida activity, heme, metal binding protein; HET: HEM; 2.80A {Rhodobacter sphaeroides} SCOP: a.25.1.1

Probab=99.82  E-value=7.5e-20  Score=145.91  Aligned_cols=117  Identities=16%  Similarity=0.149  Sum_probs=104.3

Q ss_pred             ccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccCCCCCCc
Q 028202           91 YEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPSE  170 (212)
Q Consensus        91 ~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I~~P~~e  170 (212)
                      .++++++.||+||+.|+.++++|+.|+.+|+  +++++++++||+++++||++||++|++|++.+||.|.++.+.+|...
T Consensus         3 ~~~~~~~~Ln~~la~E~~a~~~Y~~~a~~~~--~~~~~~l~~~f~~~a~ee~~Had~l~eri~~lGg~p~~~~~~~~~~~   80 (161)
T 3gvy_A            3 GDAKVIEYLNAALRSELTAVSQYWLHYRLQE--DWGFGSIAHKSRKESIEEMHHADKLIQRIIFLGGHPNLQRLNPLRIG   80 (161)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCCCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCChHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCccCCCCCCCCC
Confidence            5789999999999999999999999999998  67999999999999999999999999999999999999888877654


Q ss_pred             CccccccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhh
Q 028202          171 FDHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILL  209 (212)
Q Consensus       171 ~~~~e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~  209 (212)
                      .+..+.+......|..++..|++++..|.+.+|+.+..+
T Consensus        81 ~~~~e~l~~~l~~E~~~~~~~~~~~~~A~~~~D~~t~~~  119 (161)
T 3gvy_A           81 QTLRETLDADLAAEHDARTLYIEARDHCEKVRDYPSKML  119 (161)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCHHHHTT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
Confidence            333344677777888888899999999999999998654

>2y3q_A Bacterioferritin; metal binding protein, redox; HET: HEM; 1.55A {Escherichia coli} PDB: 1bfr_A* 1bcf_A* 2htn_A* 2vxi_A* 3e1j_A* 3e1l_A* 3e1m_A* 3e1n_A* 3e1o_A* 3e1p_A* 3ghq_A* 3e1q_A* 3e2c_A* 3isf_A* 3is8_A* 3ise_A* 3is7_A*

Probab=99.82  E-value=1.3e-19  Score=143.11  Aligned_cols=118  Identities=17%  Similarity=0.091  Sum_probs=106.2

Q ss_pred             cccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccCCCCCC
Q 028202           90 KYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPS  169 (212)
Q Consensus        90 ~~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I~~P~~  169 (212)
                      +.++++++.||++|+.|+.++++|+.++.+|+  +++++++++||+++++||++||++|.+|++.+||.|.++.+.+|+.
T Consensus         2 ~~~~~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~--~~~~~~l~~~f~~~a~ee~~Ha~~l~e~i~~lgg~p~~~~~~~~~~   79 (158)
T 2y3q_A            2 KGDTKVINYLNKLLGNELVAINQYFLHARMFK--NWGLKRLNDVEYHESIDEMKHADRYIERILFLEGLPNLQDLGKLNI   79 (158)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCCC
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCCCCCcCCC
Confidence            36789999999999999999999999999999  6799999999999999999999999999999999999999988877


Q ss_pred             cCccccccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhh
Q 028202          170 EFDHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILL  209 (212)
Q Consensus       170 e~~~~e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~  209 (212)
                      +.+..+.+......|..+...|++++..|.+.+|+.+..+
T Consensus        80 ~~~~~e~l~~~l~~E~~~~~~y~~~~~~a~~~~D~~t~~~  119 (158)
T 2y3q_A           80 GEDVEEMLRSDLALELDGAKNLREAIGYADSVHDYVSRDM  119 (158)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
Confidence            6444455777788888888899999999999999987654

>3fvb_A Bacterioferritin; niaid, ssgcid, decode, structural genomics, seattle structural genomics center for infectious disease; HET: HEM; 1.81A {Brucella melitensis biovar ABORTUS2308}

Probab=99.82  E-value=1.1e-19  Score=149.57  Aligned_cols=118  Identities=21%  Similarity=0.150  Sum_probs=106.1

Q ss_pred             cccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccCCCCCC
Q 028202           90 KYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPS  169 (212)
Q Consensus        90 ~~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I~~P~~  169 (212)
                      +.+++++++||+||+.|+.++++|++++.||+  +++++++++||+++++||++||++|++|++.+||.|.++.+.+|..
T Consensus        23 ~~~~~~~~~LN~~la~E~~a~~~Y~~~a~~~~--~~~~~~l~~~f~~~a~eE~~Had~laeri~~lGg~p~~~~~~~~~~  100 (182)
T 3fvb_A           23 KGEPKVIERLNEALFLELGAVNQYWLHYRLLN--DWGYTRLAKKEREESIEEMHHADKLIDRIIFLEGFPNLQTVSPLRI  100 (182)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSBCCCCCC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCcCCCCCCCCC
Confidence            36899999999999999999999999999998  7799999999999999999999999999999999999988888876


Q ss_pred             cCccccccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhh
Q 028202          170 EFDHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILL  209 (212)
Q Consensus       170 e~~~~e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~  209 (212)
                      +.+..+.+......|..++..|++++..|.+.+|+.+..+
T Consensus       101 ~~~~~e~l~~~l~~E~~~~~~y~~~i~~A~~~~D~~t~~~  140 (182)
T 3fvb_A          101 GQNVKEVLEADLKGEYDARASYKESREICDKLGDYVSKQL  140 (182)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
Confidence            6433345677777888888899999999999999998654

>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A

Probab=99.81  E-value=6.3e-20  Score=153.92  Aligned_cols=111  Identities=14%  Similarity=0.183  Sum_probs=98.6

Q ss_pred             HHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccCCCCCCcCcc
Q 028202           94 ECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPSEFDH  173 (212)
Q Consensus        94 eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I~~P~~e~~~  173 (212)
                      ++++.||+|++.|++|+++|++||.|+++  .||+|+|+||+.+|++|++||+++++||+  ||.|.++++. |...|++
T Consensus         8 ~t~~~Ln~a~~~E~~A~~~Yl~~A~~a~~--~G~~~iA~~f~~~A~eE~~HA~~~~~~l~--gg~~~i~~~~-p~~~~~s   82 (191)
T 1lko_A            8 RTEKNILTAFAGESQARNRYNYFGGQAKK--DGFVQISDIFAETADQEREHAKRLFKFLE--GGDLEIVAAF-PAGIIAD   82 (191)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTCHHHHHHHHHHHHHHHHHHHHHHHHCC--SSCCCCCCCC-CCCCCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCcHHHHHHHHHHHHHHHHHHHHHHHHHc--CCCccccCcC-CccccCC
Confidence            79999999999999999999999999995  49999999999999999999999999999  9999999955 6666665


Q ss_pred             cc-ccccHHHHH-HHHHHHHHHHHHHHHhcCChhhhhh
Q 028202          174 AE-KGDALYGKF-SGLTAALNHLIYSISRLKSYNVILL  209 (212)
Q Consensus       174 ~e-~~d~l~a~E-~aLt~~Ine~i~~~~~~kD~~~~~~  209 (212)
                      .. .+.....+| ...+..|++++..+.++||+.+..+
T Consensus        83 ~~e~l~~al~~E~~e~t~~y~~~~~~A~eegd~~~~~~  120 (191)
T 1lko_A           83 THANLIASAAGEHHEYTEMYPSFARIAREEGYEEIARV  120 (191)
T ss_dssp             HHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHH
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHHHHhCcHHHHHH
Confidence            53 366677777 7777789999999999999998764

>3qb9_A Bacterioferritin, BFR; cytosol, structural genomics, TB structural genomics consort TBSGC, metal binding protein; HET: HEM; 2.11A {Mycobacterium tuberculosis} PDB: 2wtl_A* 3bkn_A*

Probab=99.81  E-value=2.9e-19  Score=144.40  Aligned_cols=119  Identities=18%  Similarity=0.095  Sum_probs=106.3

Q ss_pred             cccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccCCCCCC
Q 028202           90 KYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPS  169 (212)
Q Consensus        90 ~~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I~~P~~  169 (212)
                      +.++++++.||+||+.|+.++++|+.++.+|+  +++++++++||+.+++||++||++|.+|++.+||.|.++.|++|+.
T Consensus         4 ~~~~~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~--~~~~~~l~~~f~~~a~eE~~Ha~~l~e~i~~lgg~p~~~~i~~~~~   81 (174)
T 3qb9_A            4 QGDPDVLRLLNEQLTSELTAINQYFLHSKMQD--NWGFTELAAHTRAESFDEMRHAEEITDRILLLDGLPNYQRIGSLRI   81 (174)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCCC
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcccccCCCCCCC
Confidence            46789999999999999999999999999999  6799999999999999999999999999999999999999988876


Q ss_pred             cCccccccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhhh
Q 028202          170 EFDHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILLV  210 (212)
Q Consensus       170 e~~~~e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~~  210 (212)
                      ..+..+.+......|..+...|++++..|.+.+|+.+..++
T Consensus        82 ~~~~~e~l~~al~~E~~~~~~y~~l~~~a~~~~D~~t~~~l  122 (174)
T 3qb9_A           82 GQTLREQFEADLAIEYDVLNRLKPGIVMCREKQDTTSAVLL  122 (174)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
Confidence            43333456777888888888999999999999999886543

>1nfv_A Bacterioferritin; 24 subunits in the active molecule, DIIRON HAEM Fe-coproporphyrin III cofactor, iron storage-electron complex; HET: FEC; 1.95A {Desulfovibrio desulfuricans} SCOP: a.25.1.1 PDB: 1nf6_A* 1nf4_A*

Probab=99.81  E-value=2.2e-19  Score=146.01  Aligned_cols=122  Identities=15%  Similarity=0.065  Sum_probs=108.7

Q ss_pred             hhcccccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccCC
Q 028202           86 LARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIM  165 (212)
Q Consensus        86 ~~Rq~~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I~  165 (212)
                      -+|++.++++++.||.+|+.|+.++++|+.|+.+|+  +++++++++||+.+++||++||++|.+|++.+||.|.++.+.
T Consensus         3 ~~~~~~~~~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~--~~~~~~l~~~f~~~a~eE~~Ha~~l~e~i~~lgg~p~~~~~~   80 (179)
T 1nfv_A            3 GNREDRKAKVIEVLNKARAMELHAIHQYMNQHYSLD--DMDYGELAANMKLIAIDEMRHAENFAERIKELGGEPTTQKEG   80 (179)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTBHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSS
T ss_pred             cccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCcCCCCC
Confidence            368999999999999999999999999999999999  569999999999999999999999999999999999999988


Q ss_pred             CCCCcCccccccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhh
Q 028202          166 QPPSEFDHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILL  209 (212)
Q Consensus       166 ~P~~e~~~~e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~  209 (212)
                      .|..+.+..+.+......|..+...|++++..|.+.+|+.+..+
T Consensus        81 ~~~~~~~~~e~l~~al~~E~~~~~~y~~l~~~a~~~~D~~t~~~  124 (179)
T 1nfv_A           81 KVVTGQAVPVIYESDADQEDATIEAYSQFLKVCKEQGDIVTARL  124 (179)
T ss_dssp             CCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred             cCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
Confidence            87765333345677777888888899999999999999987654

>1jgc_A Bacterioferritin, BFR; iron storage protein, metal binding protein; HET: HEM; 2.60A {Rhodobacter capsulatus} SCOP: a.25.1.1

Probab=99.80  E-value=4.5e-19  Score=140.34  Aligned_cols=117  Identities=14%  Similarity=0.047  Sum_probs=105.7

Q ss_pred             ccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccCCCCCCc
Q 028202           91 YEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPSE  170 (212)
Q Consensus        91 ~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I~~P~~e  170 (212)
                      .++++++.||++|+.|+.++++|+.|+.||+  +++++++++||+++++||++||++|++|++.+||.|.++.+.+|+.+
T Consensus         3 ~~~~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~--~~~~~~l~~~f~~~a~ee~~Ha~~l~e~i~~lgg~p~~~~~~~~~~~   80 (161)
T 1jgc_A            3 GDAKVIEFLNAALRSELTAISQYWVHFRLQE--DWGLAKMAKKSREESIEEMGHADKIIARILFLEGHPNLQKLDPLRIG   80 (161)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCCCC
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCCCCCcCCCC
Confidence            4678999999999999999999999999999  67999999999999999999999999999999999999999888776


Q ss_pred             CccccccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhh
Q 028202          171 FDHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILL  209 (212)
Q Consensus       171 ~~~~e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~  209 (212)
                      .+..+.+......|..+...|++++..|.+.+|+.+..+
T Consensus        81 ~~~~e~l~~~l~~E~~~~~~~~~~~~~a~~~~D~~t~~~  119 (161)
T 1jgc_A           81 EGPRETLECDLAGEHDALKLYREARDYCAEVGDIVSKNI  119 (161)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence            544455777788888888899999999999999988654

>2fkz_A Bacterioferritin; ferroxidase, DIIRON site, iron T metal binding protein; HET: HEM; 2.00A {Azotobacter vinelandii} SCOP: a.25.1.1 PDB: 2fl0_A* 1sof_A*

Probab=99.80  E-value=6.2e-19  Score=138.19  Aligned_cols=117  Identities=15%  Similarity=0.061  Sum_probs=105.4

Q ss_pred             ccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccCCCCCCc
Q 028202           91 YEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPSE  170 (212)
Q Consensus        91 ~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I~~P~~e  170 (212)
                      .++++++.||++++.|+.++++|+.++.+++  +++++++++||++++.||++||++|.+|++.+||.|.+..+.+|+.+
T Consensus         3 ~~~~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~--~~~~~~l~~~f~~~a~eE~~Ha~~l~e~i~~lgg~p~~~~~~~~~~~   80 (155)
T 2fkz_A            3 GDKIVIQHLNKILGNELIAINQYFLHARMYE--DWGLEKLGKHEYHESIDEMKHADKLIKRILFLEGLPNLQELGKLLIG   80 (155)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCCCC
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCC
Confidence            5788999999999999999999999999998  67999999999999999999999999999999999999888877665


Q ss_pred             CccccccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhh
Q 028202          171 FDHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILL  209 (212)
Q Consensus       171 ~~~~e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~  209 (212)
                      .+..+.+.....+|..++..|++++..|.+.+|+.+..+
T Consensus        81 ~~~~e~l~~~l~~E~~~~~~~~~~~~~a~~~~D~~t~~~  119 (155)
T 2fkz_A           81 EHTKEMLECDLKLEQAGLPDLKAAIAYCESVGDYASREL  119 (155)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence            444455777788888888899999999999999988654

>2c41_A DPS family DNA-binding stress response protein; iron-binding/oxidation protein, DPS (DNA-binding proteins from starved cells); HET: PG4 PGE; 1.81A {Thermosynechococcus elongatus}

Probab=99.79  E-value=1e-18  Score=140.43  Aligned_cols=118  Identities=8%  Similarity=0.049  Sum_probs=106.7

Q ss_pred             ccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeec--------
Q 028202           91 YEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLH--------  162 (212)
Q Consensus        91 ~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~--------  162 (212)
                      -++++.+.||+|++.|+.++++|+.++.|+.  ++++.+++.||+++++||++||+++.+||+.+||.|..+        
T Consensus         7 ~~~~v~~~LN~~La~e~~~~~~y~~~hw~v~--g~~f~~lh~~~~~~~~ee~~had~iaErI~~lGg~p~~~~~~~~~~s   84 (158)
T 2c41_A            7 LKEQVLTTLKREQANAVVMYLNYKKYHWLTY--GPLFRDLHLLFEEQGSEVFAMIDELAERSLMLDGQPVADPADYLKVA   84 (158)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSGGGHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhhheE--CcChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHC
Confidence            4678999999999999999999999999999  779999999999999999999999999999999999998        


Q ss_pred             cCCCCCCcCccccccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhhh
Q 028202          163 SIMQPPSEFDHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILLV  210 (212)
Q Consensus       163 ~I~~P~~e~~~~e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~~  210 (212)
                      .|+.|+...+..+.+..+...|..+...|++++..|.+.+|++|.-+.
T Consensus        85 ~i~~~~~~~~~~e~l~~~l~~e~~~~~~~~~~i~~a~~~~D~~T~~ll  132 (158)
T 2c41_A           85 TVTPSSGQLTVKQMIEEAIANHELIITEMHQDAEIATEAGDIGTADLY  132 (158)
T ss_dssp             CSCCCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
Confidence            478887733333568888899999999999999999999999997653

>1j30_A 144AA long hypothetical rubrerythrin; sulerythrin, sulfolobus tokodaii strain 7, FOU bundle, domain swapping, metal binding site plasticity; 1.70A {Sulfolobus tokodaii} SCOP: a.25.1.1

Probab=99.78  E-value=8.6e-19  Score=139.54  Aligned_cols=108  Identities=10%  Similarity=0.004  Sum_probs=93.5

Q ss_pred             HHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHh--cCCeeeeccCCCCCCcC
Q 028202           94 ECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNL--RGGKVKLHSIMQPPSEF  171 (212)
Q Consensus        94 eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~--RGG~V~l~~I~~P~~e~  171 (212)
                      ++++.||+|++.|++|+++|++||.||+  ++|++++|+||+++|.+|+.||.+|++|+++  +|+ |   +++.|   +
T Consensus         8 ~~~~~Ln~a~~~E~~A~~~Y~~~A~~a~--~~g~~~~a~~f~~~A~eE~~HA~~~~~~l~~~~lg~-p---~~~~p---~   78 (144)
T 1j30_A            8 KTAENLKQGFIGESMANRRYLYFAKRAD--EEGYPEIAGLLRSIAEGETAHAFGHLDFIRQGGLTD-P---ATDKP---I   78 (144)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCBC-T---TTSCB---C
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCC-C---CcCCC---C
Confidence            5999999999999999999999999999  6799999999999999999999999999999  855 4   35555   3


Q ss_pred             ccc-cccccHHHHHHHH-HHHHHHHHHHHHhcCChhhhhhh
Q 028202          172 DHA-EKGDALYGKFSGL-TAALNHLIYSISRLKSYNVILLV  210 (212)
Q Consensus       172 ~~~-e~~d~l~a~E~aL-t~~Ine~i~~~~~~kD~~~~~~~  210 (212)
                      +++ +.+......|... +..|++++..|.++||+.+..+.
T Consensus        79 ~~~~e~L~~al~~E~~~~~~~y~~~~~~A~~egd~~~~~~f  119 (144)
T 1j30_A           79 GTLEQMIESAIAGETYEWTQMYPGFAKVAREEGFPEVAEWF  119 (144)
T ss_dssp             SSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTCHHHHHHH
T ss_pred             ccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHH
Confidence            333 4466677788888 68899999999999999987653

>1ji5_A DLP-1; dodecamer, four-helix bundle, metal transport; 2.50A {Bacillus anthracis} SCOP: a.25.1.1

Probab=99.78  E-value=2.2e-18  Score=135.05  Aligned_cols=113  Identities=14%  Similarity=0.090  Sum_probs=102.5

Q ss_pred             HHHHHHHhhhhhhHHHHHHHHHHHhh-ccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeecc--------CC
Q 028202           95 CEAAINEQINVEYNVSYVYHALYAYF-DRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHS--------IM  165 (212)
Q Consensus        95 ve~aLNeQIn~El~ASy~YlsMAayF-drdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~--------I~  165 (212)
                      ++++||+|++.|+ +.|+|+.|+.|+ .  +.+++++++||+++++||++||+++.+|++.+||.|....        |+
T Consensus         2 ~~~~Ln~~la~e~-~~~~~~~~~hw~v~--g~~f~~l~~~~~~~~~ee~~had~laeri~~lGg~p~~~~~~~~~~s~i~   78 (142)
T 1ji5_A            2 VIEVLNKQVADWS-VLFTKLHNFHWYVK--GPQFFTLHEKFEELYTESATHIDEIAERILAIGGKPVATMKEYLEISSIQ   78 (142)
T ss_dssp             HHHHHHHHHHHHH-HHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHCCCC
T ss_pred             HHHHHHHHHHHHH-HHHHHHHhhhhccc--CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHhhCCCC
Confidence            6789999999999 999999999994 5  5699999999999999999999999999999999999976        99


Q ss_pred             CCCCcCccccccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhhh
Q 028202          166 QPPSEFDHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILLV  210 (212)
Q Consensus       166 ~P~~e~~~~e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~~  210 (212)
                      .|+.+++..+.+..+...|..+...+++++..|.+.+|++|.-+.
T Consensus        79 ~~~~~~~~~e~l~~~l~~e~~~~~~~~~~~~~a~~~~D~~t~~~l  123 (142)
T 1ji5_A           79 EAAYGETAEGMVEAIMKDYEMMLVELKKGMEIAQNSDDEMTSDLL  123 (142)
T ss_dssp             CCCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
Confidence            888888555668888889999999999999999999999987653

>2vzb_A Putative bacterioferritin-related protein; DPS, DPSL, iron, oxidative stress, metal transport; 2.30A {Bacteroides fragilis}

Probab=99.78  E-value=9.1e-19  Score=140.00  Aligned_cols=118  Identities=15%  Similarity=0.108  Sum_probs=101.9

Q ss_pred             cccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeecc---CCC
Q 028202           90 KYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHS---IMQ  166 (212)
Q Consensus        90 ~~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~---I~~  166 (212)
                      +.+++++++||+||+.|+.++++|+.++.||+  +++++++++||+++++||++||++|++|++.+||.|.++.   ++.
T Consensus        13 m~~~~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~--~~~~~~l~~~f~~~a~ee~~Had~lae~i~~lGg~p~~~~~~~~~~   90 (170)
T 2vzb_A           13 LDVKSLIDQLNAALSEEWLAYYQYWVGALVVE--GAMRADVQGEFEEHAEEERHHAQLIADRIIELEGVPVLDPKKWFEL   90 (170)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCB--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCGGGHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCHHHHHHh
Confidence            46789999999999999999999999999998  6799999999999999999999999999999999999887   544


Q ss_pred             ------CCCcCccccccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhhh
Q 028202          167 ------PPSEFDHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILLV  210 (212)
Q Consensus       167 ------P~~e~~~~e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~~  210 (212)
                            |+.+|+..+.+......|..+...|++++..|.+. |+.+..++
T Consensus        91 ~~~~~~~~~~~~~~e~l~~~l~~E~~~~~~~~~~~~~a~~~-D~~t~~~l  139 (170)
T 2vzb_A           91 ARCKYDSPTAFDSVSLLNQNVSSERCAILRYQEIANFTNGK-DYTTCDIA  139 (170)
T ss_dssp             CSSCCCCCCSCBHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CHHHHHHH
T ss_pred             hcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CHHHHHHH
Confidence                  44446544556777778888888999999999666 99886543

>2qqy_A Sigma B operon; dodecameric alpha-helical, ferritin fold, structural genomic protein structure initiative; 2.00A {Bacillus anthracis str}

Probab=99.77  E-value=4.1e-18  Score=132.72  Aligned_cols=117  Identities=17%  Similarity=0.118  Sum_probs=102.1

Q ss_pred             ccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccCCCCCCc
Q 028202           91 YEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPSE  170 (212)
Q Consensus        91 ~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I~~P~~e  170 (212)
                      .++++++.||++++.|+.++++|+.++.+++  +++++++++||+.+++||++|+++|.+|++.+||.|.+ .+.+|+..
T Consensus         7 ~~~~~~~~Ln~~l~~E~~a~~~Y~~~a~~~~--~~~~~~l~~~f~~~a~ee~~Ha~~l~e~i~~lgg~p~~-~~~~~~~~   83 (149)
T 2qqy_A            7 DVKELIEGLNEDLAGEYSAIIMYNHNAATVS--GIYRQVLKPFFESEISDEQGHALYLAEKIKTLGGTPTT-IPLRVKQA   83 (149)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCC-CCCCCCCC
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCC-CCCCCCCC
Confidence            4578999999999999999999999999999  77999999999999999999999999999999999998 66665543


Q ss_pred             CccccccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhhh
Q 028202          171 FDHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILLV  210 (212)
Q Consensus       171 ~~~~e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~~  210 (212)
                      .+..+.+......|..+...|++++..|.+.+|+.+..++
T Consensus        84 ~~~~e~l~~~l~~E~~~~~~~~~~~~~a~~~~D~~t~~~l  123 (149)
T 2qqy_A           84 EDVREMLEYARQSEYETIKRYEKRKEQAANLNMTELVVKL  123 (149)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
Confidence            3333456777788888888999999999999999886543

>1n1q_A DPS protein; four-helix bundle, unknown function; 2.20A {Brevibacillus brevis} SCOP: a.25.1.1

Probab=99.77  E-value=4.8e-18  Score=134.72  Aligned_cols=121  Identities=15%  Similarity=0.084  Sum_probs=107.9

Q ss_pred             cccccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeec-----
Q 028202           88 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLH-----  162 (212)
Q Consensus        88 Rq~~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~-----  162 (212)
                      +.+.++++.++||+|++.|+.+.+.|..+..++.  ++++.|++.||+++++||++||+++.+|++.+||.|..+     
T Consensus         2 ~~~~~~~v~~~LN~~la~e~~~~~~~~~~hw~v~--g~~f~~lh~~~~~~~~ee~~had~laeri~~lGg~p~~~~~~~~   79 (149)
T 1n1q_A            2 KTSIQQLVAVLLNRQVANWVVLYVKLHNFHWNVN--GPNFFTLHEKFEELYTEASGHIDTLAERVLSIGGSPIATLAASL   79 (149)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHH
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHHHhccchhee--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
Confidence            4467889999999999999887777777777777  779999999999999999999999999999999999998     


Q ss_pred             ---cCCCCCCcCccccccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhhh
Q 028202          163 ---SIMQPPSEFDHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILLV  210 (212)
Q Consensus       163 ---~I~~P~~e~~~~e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~~  210 (212)
                         .|+.|+.+++..+.+..+...|..+...+++++..|.+.+|++|..+.
T Consensus        80 ~~s~i~~~~~~~~~~e~l~~~l~~e~~~~~~~~~~i~~a~~~~D~~T~~ll  130 (149)
T 1n1q_A           80 EEASIKEATGGESAAEMVSSVVNDFVDLVGELKVARDVADEADDEATADML  130 (149)
T ss_dssp             HHCCSCCCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred             hHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
Confidence               588888888555668888999999999999999999999999997654

>1jig_A DLP-2; dodecamer, four-helix bundle, metal transport; 1.46A {Bacillus anthracis} SCOP: a.25.1.1

Probab=99.75  E-value=1.5e-17  Score=131.18  Aligned_cols=116  Identities=16%  Similarity=0.075  Sum_probs=105.2

Q ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeec--------cC
Q 028202           93 DECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLH--------SI  164 (212)
Q Consensus        93 ~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~--------~I  164 (212)
                      +++.++||+|++.|+.+.+.|..+..++.  ++++.|+++||+++++||++||+++.+|++.+||.|..+        .|
T Consensus         4 ~~v~~~LN~~la~~~~~~~~~~~~hw~v~--g~~f~~lh~~~~~~~~ee~~had~laeri~~lGg~p~~~~~~~~~~s~i   81 (146)
T 1jig_A            4 TNVVEVLNKQVANWNVLYVKLHNYHWYVT--GPHFFTLHEKFEEFYNEAGTYIDELAERILALEGKPLATMKEYLATSSV   81 (146)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHCCS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhhccc--CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHhHCcC
Confidence            67899999999999988888888887778  779999999999999999999999999999999999998        48


Q ss_pred             CCCCCcCccccccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhhh
Q 028202          165 MQPPSEFDHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILLV  210 (212)
Q Consensus       165 ~~P~~e~~~~e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~~  210 (212)
                      +.|+.+++..+.+..+...|..+...+++++..|.+.+|++|.-+.
T Consensus        82 ~~~~~~~~~~e~l~~~l~~e~~~~~~~~~~i~~a~~~~D~~T~~ll  127 (146)
T 1jig_A           82 NEGTSKESAEEMVQTLVNDYSALIQELKEGMEVAGEAGDATSADML  127 (146)
T ss_dssp             CCCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
Confidence            8898888545668888999999999999999999999999997654

>2d5k_A DPS, DPS family protein; four helix bundle, metal binding protein; 1.85A {Staphylococcus aureus subsp}

Probab=99.74  E-value=2.1e-17  Score=132.88  Aligned_cols=117  Identities=13%  Similarity=0.103  Sum_probs=106.3

Q ss_pred             cHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeec--------c
Q 028202           92 EDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLH--------S  163 (212)
Q Consensus        92 s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~--------~  163 (212)
                      +++++++||+|++.|+.+.+.|..+..++.  ++++.|++.||+++++||++||+++.+||+.+||.|..+        .
T Consensus         5 ~~~v~~~LN~~La~e~~~~~~~~~~hw~v~--g~~f~~lh~~~~~~~~ee~~had~iaERI~~lGg~p~~~~~~~~~~s~   82 (156)
T 2d5k_A            5 QQDVVKELNQQVANWTVAYTKLHNFHWYVK--GPNFFSLHVKFEELYNEASQYVDELAERILAVGGNPVGTLTECLEQSI   82 (156)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhheeeeE--CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCC
Confidence            568999999999999988888888888878  779999999999999999999999999999999999998        5


Q ss_pred             CCCCCCcCccccccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhhh
Q 028202          164 IMQPPSEFDHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILLV  210 (212)
Q Consensus       164 I~~P~~e~~~~e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~~  210 (212)
                      |+.|+.+++..+.+..+...|..+...|++++..|.+.+|++|.-+.
T Consensus        83 i~~~~~~~~~~e~l~~~l~~e~~~~~~~~~~i~~a~~~~D~~T~~ll  129 (156)
T 2d5k_A           83 VKEAAKGYSAEQMVEELSQDFTNISKQLENAIEIAGNAGDDVSEDMF  129 (156)
T ss_dssp             SCCCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
Confidence            88898888555668888999999999999999999999999997654

>2vxx_A Starvation induced DNA binding protein; stress response protein, DPS, oxidation, iron binding, ferroxidase centre; HET: PG4; 2.40A {Synechococcus elongatus}

Probab=99.74  E-value=2.1e-17  Score=137.25  Aligned_cols=120  Identities=13%  Similarity=0.081  Sum_probs=108.1

Q ss_pred             ccccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeec------
Q 028202           89 QKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLH------  162 (212)
Q Consensus        89 q~~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~------  162 (212)
                      .+-+++++++||+|++.|+.++++|+.++.|++  ++++++++.||.++++||++|+++|.+||+.+||.|...      
T Consensus        23 ~~~~~~vi~~LN~~La~e~~a~~~y~~~hw~v~--g~~f~~lh~~~~~~~~ee~~had~laErI~~LGg~p~~~~~~~~~  100 (192)
T 2vxx_A           23 KATTTPICEGMNRLLASFQALYLQYQKHHFVVE--GAEFYPLHQFFQDCYEQVQDHVHALGERLNGLGGVPVAGFQQLAA  100 (192)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHH
Confidence            345678999999999999999999999999999  779999999999999999999999999999999999998      


Q ss_pred             --cCCCCCCcCccc-cccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhhh
Q 028202          163 --SIMQPPSEFDHA-EKGDALYGKFSGLTAALNHLIYSISRLKSYNVILLV  210 (212)
Q Consensus       163 --~I~~P~~e~~~~-e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~~  210 (212)
                        .|+.|+.++.++ +.+..+...|..+...|++++..|.+.+|+.|..++
T Consensus       101 ~s~i~e~~~~~~~~~e~l~~~l~~e~~~i~~~~~~i~~a~~~~D~~T~~lL  151 (192)
T 2vxx_A          101 LCCFTPEPEGAFNCRQMLSNDLQAEQAIIGVLRQQATQAESLGDRATAYLY  151 (192)
T ss_dssp             HCSSCCCCSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred             HCcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
Confidence              888887755444 557888888999999999999999999999987653

>2clb_A DPS-like protein; DI-iron carboxylate, hypothetical protein, bacterioferritin, hydrogen peroxide, metal binding protein, archaea; 2.4A {Sulfolobus solfataricus}

Probab=99.68  E-value=1.7e-16  Score=132.09  Aligned_cols=117  Identities=14%  Similarity=0.100  Sum_probs=104.7

Q ss_pred             ccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeec--------
Q 028202           91 YEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLH--------  162 (212)
Q Consensus        91 ~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~--------  162 (212)
                      -+++++++||+|++.|+.+.++|+.++.++.  ++++.+++.||+++++||++||+++.+||+.+||.|...        
T Consensus        22 ~~~~v~~~LN~~La~e~~~~~~y~~~hw~v~--G~~f~~lh~~f~~~~~ee~~haD~iaERI~~LGg~p~~~~~~~~~~s   99 (188)
T 2clb_A           22 DIKKLVDKLVKATAAEFTTYYYYTILRMHLT--GMEGEGLKEIAEDARLEDRLHFELMTQRIYELGGGLPRDIRQLADIS   99 (188)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC--HHHHGGGHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSSHHHHHHHC
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHhc
Confidence            3678999999999999999999999998888  779999999999999999999999999999999999954        


Q ss_pred             cCC-C-CCCcCccc-cccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhhh
Q 028202          163 SIM-Q-PPSEFDHA-EKGDALYGKFSGLTAALNHLIYSISRLKSYNVILLV  210 (212)
Q Consensus       163 ~I~-~-P~~e~~~~-e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~~  210 (212)
                      .|+ . |+.+|.++ +.+..+...|..+...|++++..|.+. |++|.-++
T Consensus       100 ~I~~e~~~~~~~~~~e~l~~~l~~e~~v~~~~~~~i~~A~e~-D~~T~dlL  149 (188)
T 2clb_A          100 ACSDAYLPENWKDPKEILKVLLEAEQCAIRTWKEVCDMTYGK-DPRTYDLA  149 (188)
T ss_dssp             SSCCCCCCTTTTSHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CHHHHHHH
T ss_pred             cCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHH
Confidence            788 7 67666554 558888899999999999999999999 99997654

>1tjo_A Iron-rich DPSA-homolog protein; ferritin, low-iron, metal binding protein; 1.60A {Halobacterium salinarum} SCOP: a.25.1.1 PDB: 1moj_A 1tk6_A 1tko_A 1tkp_A

Probab=99.53  E-value=1.3e-13  Score=113.93  Aligned_cols=117  Identities=15%  Similarity=0.178  Sum_probs=98.6

Q ss_pred             ccHHHHHHHHHhhhhhhHHHHHHHHHHHhh-ccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeee--------
Q 028202           91 YEDECEAAINEQINVEYNVSYVYHALYAYF-DRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKL--------  161 (212)
Q Consensus        91 ~s~eve~aLNeQIn~El~ASy~YlsMAayF-drdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l--------  161 (212)
                      -.+++++.||+++..|+.+ |.|+.++.|+ .  ++++.+++.||.++++||++||+++.+||+.+||.|..        
T Consensus        26 ~~~~vi~~LN~~La~~~~~-~~~~~~~hw~v~--G~~f~~lh~~~ee~~~e~~~haD~laERI~~LGg~P~~~~~~~~~~  102 (182)
T 1tjo_A           26 RAEQCVDALNADLANVYVL-YHQLKKHHWNVE--GAEFRDLHLFLGEAAETAEEVADELAERVQALGGVPHASPETLQAE  102 (182)
T ss_dssp             HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHH-HHHHHHhhhhee--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHh
Confidence            4568999999999666655 5555555665 6  67999999999999999999999999999999999999        


Q ss_pred             ccCCCCCCcCcc-ccccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhhh
Q 028202          162 HSIMQPPSEFDH-AEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILLV  210 (212)
Q Consensus       162 ~~I~~P~~e~~~-~e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~~  210 (212)
                      ..|+.|+.++.+ .+.+..+...|..+...+++++..|.+.+|++|..+.
T Consensus       103 s~i~e~~~~~~~~~e~l~~~l~~e~~~i~~~r~~i~~a~e~~D~~T~dll  152 (182)
T 1tjo_A          103 ASVDVEDEDVYDIRTSLANDMAIYGDIIEATREHTELAENLGDHATAHML  152 (182)
T ss_dssp             CCSCCCCSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHCCCHHHHHHH
Confidence            778888776434 4567888888889999999999999999999997654

>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A

Probab=99.50  E-value=1.1e-13  Score=117.21  Aligned_cols=111  Identities=8%  Similarity=-0.042  Sum_probs=93.7

Q ss_pred             HHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccCCCCCCcCccc
Q 028202           95 CEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPSEFDHA  174 (212)
Q Consensus        95 ve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I~~P~~e~~~~  174 (212)
                      +++.||.+++.|.++++.|+.|+.++++.  |++++|+||+..+.+|++||+++++++..+||.|.+ .+. |...+.+.
T Consensus        29 T~~nL~~a~~gE~~a~~~Y~~~A~~A~~e--G~~~iA~~F~~~A~~E~~HA~~~~~~l~~l~~~~~i-~~~-p~~~~gst  104 (202)
T 1yuz_A           29 TLENLKAAIAGETGAHAKYTAFAKAAREQ--GYEQIARLFEATAAAELIHIGLEYALVAEMEPGYEK-PTV-AAPSAYSC  104 (202)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCC-CCC---CCCCCH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcee-ccC-CccCCCCH
Confidence            88999999999999999999999999954  999999999999999999999999999999999999 887 55344433


Q ss_pred             -cccccHHHHH-HHHHHHHHHHHHHHHhcCChhhhhh
Q 028202          175 -EKGDALYGKF-SGLTAALNHLIYSISRLKSYNVILL  209 (212)
Q Consensus       175 -e~~d~l~a~E-~aLt~~Ine~i~~~~~~kD~~~~~~  209 (212)
                       +.+......| ...+..|.+.+..+.++||+.+..+
T Consensus       105 ~enL~~a~~gE~~E~t~my~~~a~~A~eEgd~~~a~~  141 (202)
T 1yuz_A          105 DLNLISGANGEIYETSDMYPAFIRKAQEEGNSKAVHV  141 (202)
T ss_dssp             HHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHH
T ss_pred             HHHHHHHHHhHHHHHHHHHHHHHHHHHHCCCHHHHHH
Confidence             2344455555 5555679999999999999988654

>2chp_A MRGA, metalloregulation DNA-binding stress protein; DNA-binding protein, DPS, dodecameric, ferritin; 2.0A {Bacillus subtilis}

Probab=99.28  E-value=7e-11  Score=94.92  Aligned_cols=116  Identities=17%  Similarity=0.143  Sum_probs=101.0

Q ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeec--------cC
Q 028202           93 DECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLH--------SI  164 (212)
Q Consensus        93 ~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~--------~I  164 (212)
                      +++.+.||+.+..|+.+.++|+...-+..  ++++..+..+|.++++++++|+..+.+++...||.|...        .|
T Consensus        11 ~~vi~~Ln~~La~~~~~~~q~~~~hw~v~--G~~f~~lh~~~ee~~~e~~~~~D~lAERI~~LGg~P~~~~~~~~~~s~i   88 (153)
T 2chp_A           11 TLVENSLNTQLSNWFLLYSKLHRFHWYVK--GPHFFTLHEKFEELYDHAAETVDTIAERLLAIGGQPVATVKEYTEHASI   88 (153)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCSS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhheE--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHhHCCC
Confidence            47899999999999999999997777766  789999999999999999999999999999999999985        35


Q ss_pred             CCCCCcCccccccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhhh
Q 028202          165 MQPPSEFDHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILLV  210 (212)
Q Consensus       165 ~~P~~e~~~~e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~~  210 (212)
                      +.++.+++..+....+...+..+...+++++..|.+.+|++|..+.
T Consensus        89 ~e~~~~~~~~eml~~~l~~~~~~i~~~r~~i~~a~~~~D~~T~dll  134 (153)
T 2chp_A           89 TDGGNETSASEMVQALVNDYKQISSESKFVIGLAEENQDNATADLF  134 (153)
T ss_dssp             CSCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCHHHHHHH
Confidence            6666666555667777778888888999999999999999997653

>2fjc_A Antigen TPF1; mini ferritin, iron binding protein, metal transport; 2.50A {Treponema pallidum} SCOP: a.25.1.1

Probab=99.27  E-value=5.5e-11  Score=95.81  Aligned_cols=118  Identities=8%  Similarity=-0.018  Sum_probs=102.3

Q ss_pred             ccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeec--------
Q 028202           91 YEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLH--------  162 (212)
Q Consensus        91 ~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~--------  162 (212)
                      -.+++++.||+.+..|+.+.++|+...-+..  ++++..+..+|.++++++++|+..+.++|...||.|...        
T Consensus        10 ~~~~vi~~Ln~~La~~~~~~~q~~~~hw~v~--G~~f~~lh~~~ee~~~e~~~~aD~lAERI~~LGg~P~~~~~~~~~~s   87 (156)
T 2fjc_A           10 AIAAICEQLRQHVADLGVLYIKLHNYHWHIY--GIEFKQVHELLEEYYVSVTEAFDTIAERLLQLGAQAPASMAEYLALS   87 (156)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhhheE--CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHhhC
Confidence            4678999999999999999999999988888  789999999999999999999999999999999999884        


Q ss_pred             cCCCCCCc-CccccccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhhh
Q 028202          163 SIMQPPSE-FDHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILLV  210 (212)
Q Consensus       163 ~I~~P~~e-~~~~e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~~  210 (212)
                      .|+.++.+ ++..+....+...|..+...+++++..|.+.+|++|..+.
T Consensus        88 ~i~e~~~~~~~~~eml~~~l~~~~~~i~~~r~~i~~a~~~~D~~T~dll  136 (156)
T 2fjc_A           88 GIAEETEKEITIVSALARVKRDFEYLSTRFSQTQVLAAESGDAVTDGII  136 (156)
T ss_dssp             CSCCCCCCSEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCHHHHHHH
Confidence            35655555 3444566777777888888999999999999999997654

>1o9r_A Agrobacterium tumefaciens DPS; iron-binding protein, DNA protection from oxidative damage, DNA-binding, iron- binding protein; 1.45A {Agrobacterium tumefaciens} SCOP: a.25.1.1 PDB: 3ge4_A*

Probab=99.27  E-value=7.5e-11  Score=95.44  Aligned_cols=118  Identities=10%  Similarity=0.118  Sum_probs=102.4

Q ss_pred             ccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeec--------
Q 028202           91 YEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLH--------  162 (212)
Q Consensus        91 ~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~--------  162 (212)
                      -.+++.+.||+.+..|+.+.++|+...-+..  ++++..+..+|.++++++++|+..+.++|...||.|..+        
T Consensus        14 ~~~~vi~~Ln~~La~~~~l~~q~~~~hw~v~--G~~f~~lh~~~ee~~~e~~~~aD~lAERI~~LGg~P~~~~~~~~~~s   91 (162)
T 1o9r_A           14 AKSTVIGILNESLASVIDLALVTKQAHWNLK--GPQFIAVHELLDTFRTQLDNHGDTIAERVVQLGGTALGSLQAVSSTT   91 (162)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCB--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhhheE--CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHhHC
Confidence            4567999999999999999999999888888  789999999999999999999999999999999999987        


Q ss_pred             cCCCCCCcC-ccccccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhhh
Q 028202          163 SIMQPPSEF-DHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILLV  210 (212)
Q Consensus       163 ~I~~P~~e~-~~~e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~~  210 (212)
                      .|+..+.+. +..+....+...|..+...+++++..|.+.+|++|..+.
T Consensus        92 ~i~e~~~~~~~~~eml~~~l~~~~~~i~~~r~~i~~a~~~~D~~T~dll  140 (162)
T 1o9r_A           92 KLKAYPTDIYKIHDHLDALIERYGEVANMIRKAIDDSDEAGDPTTADIF  140 (162)
T ss_dssp             CSCCCCSSCCBHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCHHHHHHH
Confidence            566544443 445566777777888888999999999999999997654

>2bk6_A Non-heme iron-containing ferritin; DPS (DNA binding protein from starved cells), ferroxidase center, mutagenesis study; 2.19A {Listeria innocua} SCOP: a.25.1.1 PDB: 1qgh_A 2bjy_A 2iy4_A 2bkc_A

Probab=99.25  E-value=5.5e-11  Score=95.67  Aligned_cols=116  Identities=14%  Similarity=0.053  Sum_probs=101.9

Q ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeec--------cC
Q 028202           93 DECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLH--------SI  164 (212)
Q Consensus        93 ~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~--------~I  164 (212)
                      +++.+.||+.+..|+.+.++|+..+-+..  ++++..+..+|.++++++++|+..+.++|...||.|...        .|
T Consensus         7 ~~vi~~Ln~~La~~~~~~~q~~~~hw~v~--G~~f~~lh~~~ee~~~e~~~~~D~lAERI~~Lgg~P~~~~~~~~~~s~l   84 (156)
T 2bk6_A            7 VDTKEFLNHQVANLNVFTVKIHQIGWYMR--GHNFFTLHEKMDDLYSEFGEQMDEVAERLLAIGGSPFSTLKEFLENASV   84 (156)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCCS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccchheE--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHhHCCC
Confidence            46899999999999999999999988888  789999999999999999999999999999999999985        37


Q ss_pred             CCCCCcC--ccccccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhhh
Q 028202          165 MQPPSEF--DHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILLV  210 (212)
Q Consensus       165 ~~P~~e~--~~~e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~~  210 (212)
                      +..+.++  +..+....+...+..+...+++++..|.+.+|++|..+.
T Consensus        85 ~e~~~~~~~~~~eml~~~l~~~~~~i~~~r~~i~~a~~~~D~~T~dll  132 (156)
T 2bk6_A           85 EEAPYTKPKTMDQLMEDLVGTLELLRDEYKQGIELTDKEGDDVTNDML  132 (156)
T ss_dssp             CCCCCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHCCCHHHHHHH
Confidence            6655555  555667777788888888999999999999999997653

>2yjk_A AFP, DPS; metal-binding protein, iron uptake, ferritin fold; 2.00A {Microbacterium arborescens} PDB: 2yjj_A

Probab=99.24  E-value=7.5e-11  Score=95.58  Aligned_cols=118  Identities=7%  Similarity=-0.011  Sum_probs=101.0

Q ss_pred             cccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeecc------
Q 028202           90 KYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHS------  163 (212)
Q Consensus        90 ~~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~------  163 (212)
                      .-.+++.+.||+.+..|+.+.++|+...-+..  ++++..+..+|.++++++++|+..+.+++...||.|....      
T Consensus        16 ~~~~~vi~~Ln~~La~~~~l~~q~~~~hw~v~--G~~f~~lh~~~ee~~~e~~~~aD~lAERI~~LGg~P~~t~~~~~~~   93 (161)
T 2yjk_A           16 EVAAAAAQFLTPVVHKMQALVVNGKQAHWNVR--GSNFIAIHELLDSVVAHAQDYADTAAERIVALGLPIDSRVSTMAEK   93 (161)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhheeeE--CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHh
Confidence            34567999999999999999999997777777  7899999999999999999999999999999999999855      


Q ss_pred             -CCCCCCcC-ccccccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhhh
Q 028202          164 -IMQPPSEF-DHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILLV  210 (212)
Q Consensus       164 -I~~P~~e~-~~~e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~~  210 (212)
                       |+.++.+. +..+....+...|..+...+++++ .|.+.+|++|..+.
T Consensus        94 si~e~~~~~~~~~eml~~~l~~~~~~i~~~r~~i-~a~~~~D~~T~dll  141 (161)
T 2yjk_A           94 TSTAVPAGFAQWQDEIKAIVSDIDAALVDLQAAI-DGLDEVDLTSQDVA  141 (161)
T ss_dssp             CCCCSCSSCEEHHHHHHHHHHHHHHHHHHHHHHH-HHHTTTCHHHHHHH
T ss_pred             ccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH-HhcccCCHHHHHHH
Confidence             66655543 445566777777888888999999 99999999997654

>2c2u_A DPS, DNA-binding stress response protein; DNA-binding protein, iron; 1.1A {Deinococcus radiodurans} PDB: 2c2f_A 2f7n_A

Probab=99.19  E-value=2.2e-10  Score=97.24  Aligned_cols=118  Identities=9%  Similarity=0.007  Sum_probs=101.2

Q ss_pred             ccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeec--------
Q 028202           91 YEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLH--------  162 (212)
Q Consensus        91 ~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~--------  162 (212)
                      -.+++++.||+.+..|+.+.++|+...-+..  ++++..+..+|.++++|+++|+..+.++|+..||.|...        
T Consensus        57 ~~~~vi~~LN~~LAde~~l~~qy~~~HWnv~--G~~F~~LHe~~ee~~~e~~~haD~lAERIl~LGG~P~~t~~~~~~~s  134 (207)
T 2c2u_A           57 EFQTVAETLQRNLATTISLYLKFKKYHWDIR--GRFFRDLHLAYDEFIAEIFPSIDEQAERLVALGGSPLAAPADLARYS  134 (207)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHTHHHHHHHHHHHHTTBCCCCSHHHHHHHC
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHhC
Confidence            4467999999999999999999997777777  789999999999999999999999999999999999885        


Q ss_pred             cCCCCCCc-CccccccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhhh
Q 028202          163 SIMQPPSE-FDHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILLV  210 (212)
Q Consensus       163 ~I~~P~~e-~~~~e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~~  210 (212)
                      .|+..+.+ ++..++...+...|..+...++++|..|.+.+|++|..+.
T Consensus       135 ~I~e~~~g~~~~~emL~~ll~~e~~~i~~~re~i~~aee~~D~~T~dLl  183 (207)
T 2c2u_A          135 TVQVPQETVRDARTQVADLVQDLSRVGKGYRDDSQACDEANDPVTADMY  183 (207)
T ss_dssp             SSCCCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred             CCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
Confidence            36655544 4445567777777888888999999999999999997654

>2wlu_A DPS-like peroxide resistance protein; DNA-binding, oxidoreductase; 1.94A {Streptococcus pyogenes} PDB: 2wla_A

Probab=99.15  E-value=6.5e-10  Score=91.47  Aligned_cols=120  Identities=11%  Similarity=0.033  Sum_probs=101.5

Q ss_pred             ccccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeec------
Q 028202           89 QKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLH------  162 (212)
Q Consensus        89 q~~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~------  162 (212)
                      ..-.+++.+.||+.+..|+.+..+|....-+..  +.++..+..+|.++++++++|+..+.++|...||.|...      
T Consensus        22 ~~~~~~vi~~LN~~LA~~~~l~~k~~~~HWnv~--G~~f~~lh~~~ee~~~e~~~~aD~lAERIl~LGg~P~~t~~~~~~   99 (175)
T 2wlu_A           22 ASKNEKTKAVLNQAVADLSVAASIVHQVHWYMR--GPGFLYLHPKMDELLDSLNANLDEVSERLITIGGAPYSTLAEFSK   99 (175)
T ss_dssp             -CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHhhhccc--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHH
Confidence            456789999999999999999999976665555  679999999999999999999999999999999999985      


Q ss_pred             --cCCCCCCcC--ccccccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhhh
Q 028202          163 --SIMQPPSEF--DHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILLV  210 (212)
Q Consensus       163 --~I~~P~~e~--~~~e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~~  210 (212)
                        .|+..+.++  +..+....+...+..+...+++++..|.+.+|++|..+.
T Consensus       100 ~s~i~e~~~~~~~~~~eml~~~l~~~~~~i~~~r~~i~~ae~~~D~~T~dll  151 (175)
T 2wlu_A          100 HSKLDEAKGTYDKTVAQHLARLVEVYLYLSSLYQVGLDITDEEGDAGTNDLF  151 (175)
T ss_dssp             HCSCCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred             hCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
Confidence              466555544  555667777778888888999999999999999997654

>2pyb_A NAPA, neutrophil activating protein; ferritin, DPS, four-helix bundle, metal transport; 2.60A {Borrelia burgdorferi}

Probab=99.14  E-value=2.4e-10  Score=91.50  Aligned_cols=116  Identities=9%  Similarity=0.015  Sum_probs=100.4

Q ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeecc--------C
Q 028202           93 DECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHS--------I  164 (212)
Q Consensus        93 ~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~--------I  164 (212)
                      +++.+.||+.+..|+.+..+|....-+..  +.++..+..+|.++++++++|+..+.++|...||.|....        |
T Consensus         4 ~~vi~~Ln~~La~~~~~~~~~~~~hW~v~--G~~f~~lh~~~ee~~~e~~~~aD~lAERI~~Lgg~P~~~~~~~~~~s~l   81 (151)
T 2pyb_A            4 DAIQLKLQELLASLHIFYSNLRGIHWNIK--DTNFFVIHKKTQKLYEYIEKIIDIVAERSRMLGYDSEFRYSEFMKKSFI   81 (151)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CSSTHHHHHHHHHHHTTTHHHHHHHHHHHHHHTCCCCCCSTTTTTTCSS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHccccccC--CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCC
Confidence            46899999999999999999977665566  6799999999999999999999999999999999999852        5


Q ss_pred             CCCCCcC--ccccccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhhh
Q 028202          165 MQPPSEF--DHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILLV  210 (212)
Q Consensus       165 ~~P~~e~--~~~e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~~  210 (212)
                      +.++.++  +..+....+...+..+...+++++..|.+.+|++|.-+.
T Consensus        82 ~e~~~~~~~~~~eml~~~l~~~~~~i~~~r~~i~~a~~~~D~~T~dll  129 (151)
T 2pyb_A           82 KELDIESTSNFLPSMESIVCSLTEILKNIFGMRKLIDTAGDYGTANIM  129 (151)
T ss_dssp             CCCCSCSSSCCCSSCCTTSTTHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCHHHHHHH
Confidence            5655555  666777878888999999999999999999999997653

>2cf7_A DPR; peroxide resistance, DPS-family, ferritin-like, ferroxidase, iron-binding; HET: EPE; 1.50A {Streptococcus suis} PDB: 2ux1_A* 2bw1_A* 1umn_A* 2v15_A* 2xjm_A* 2xjn_A* 2xjo_A* 2xkq_A*

Probab=99.13  E-value=5.9e-10  Score=90.82  Aligned_cols=119  Identities=12%  Similarity=0.007  Sum_probs=97.6

Q ss_pred             cccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeec-------
Q 028202           90 KYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLH-------  162 (212)
Q Consensus        90 ~~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~-------  162 (212)
                      .-.+++.+.||+++..|+.++.+|....-+..  +.++..+..+|.++++++++|+..+.++|...||.|...       
T Consensus        13 ~~~~~vi~~LN~~La~~~~l~~~~~~~hW~v~--G~~f~~lh~~~ee~~~e~~~haD~lAERIl~LGg~P~~t~~~~~~~   90 (165)
T 2cf7_A           13 PSLADSKAVLNQAVADLSVAHSILHQVHWYMR--GRGFMIWHPKMDEYMEEIDGYLAEMSERLITLGGAPFSTLKEFSEN   90 (165)
T ss_dssp             C---CHHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHhhhhheE--CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
Confidence            34567899999999999999999976665566  678999999999999999999999999999999999885       


Q ss_pred             -cCCCCCCcC--ccccccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhhh
Q 028202          163 -SIMQPPSEF--DHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILLV  210 (212)
Q Consensus       163 -~I~~P~~e~--~~~e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~~  210 (212)
                       .|+..+.++  +..++...+...|..+...+++++..|.+.+|++|.-+.
T Consensus        91 s~i~e~~~~~~~~~~eml~~~l~~~~~~i~~~r~~i~~a~~~~D~~T~dll  141 (165)
T 2cf7_A           91 SQLKEVLGDYNVTIEEQLARVVEVFRYLAALFQKGFDVSDEEGDSVTNDIF  141 (165)
T ss_dssp             CSCCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCHHHHHHH
Confidence             355444433  445567777778888888999999999999999997654

>2yw6_A DNA protection during starvation protein; DNA-binding protein, quarternary assembly, ferroxidation, oxidoreductase; HET: DNA; 2.53A {Mycobacterium smegmatis} SCOP: a.25.1.1 PDB: 1vei_A 1vel_A 1veq_A 1uvh_A* 2yw7_A

Probab=99.11  E-value=6.5e-10  Score=92.18  Aligned_cols=118  Identities=14%  Similarity=0.053  Sum_probs=101.1

Q ss_pred             cccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeec-------
Q 028202           90 KYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLH-------  162 (212)
Q Consensus        90 ~~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~-------  162 (212)
                      +-.+++.+.||+.+..|+.+.++|+...-+..  ++++..+..+|.++++|+++|+..+.++|...||.|...       
T Consensus        12 ~~~~~vi~~LN~~LA~~~~l~~q~~~~hW~v~--G~~F~~lh~~~ee~~~e~~~haD~lAERIl~LGg~P~~t~~~~~~~   89 (183)
T 2yw6_A           12 KKASDVADLLQKQLSTYNDLHLTLKHVHWNVV--GPNFIGVHEMIDPQVELVRGYADEVAERIATLGKSPKGTPGAIIKD   89 (183)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc--CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHH
Confidence            45678999999999999999999998777777  789999999999999999999999999999999999984       


Q ss_pred             -cCCCCCCc-CccccccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhhh
Q 028202          163 -SIMQPPSE-FDHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILLV  210 (212)
Q Consensus       163 -~I~~P~~e-~~~~e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~~  210 (212)
                       .|+.++.+ ++..++...+...|..+...++++|..|.+. |++|..+.
T Consensus        90 s~i~e~~~~~~~~~eml~~~l~~~~~~i~~~r~~i~~ae~~-D~~T~dll  138 (183)
T 2yw6_A           90 RTWDDYSVERDTVQAHLAALDLVYNGVIEDTRKSIEKLEDL-DLVSQDLL  138 (183)
T ss_dssp             CCSCCCCCCSEEHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CHHHHHHH
T ss_pred             CCCCccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CHHHHHHH
Confidence             56665554 3444566777777888888999999999999 99987654

>2z90_A Starvation-inducible DNA-binding protein or FINE tangled PILI major subunit; quarternary assembly, ferroxidation; 2.40A {Mycobacterium smegmatis str}

Probab=99.11  E-value=9.2e-10  Score=89.26  Aligned_cols=118  Identities=10%  Similarity=0.012  Sum_probs=99.2

Q ss_pred             cccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeec-------
Q 028202           90 KYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLH-------  162 (212)
Q Consensus        90 ~~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~-------  162 (212)
                      +-.+++.+.||+.+..|+.+..+|....-+..  +.++..+..+|.++++++++|+..+.++|...||.|...       
T Consensus        14 ~~~~~vi~~Ln~~La~~~~l~~~~~~~hW~v~--G~~f~~lh~~~ee~~~e~~~~aD~lAERIl~LGg~P~~t~~~~~~~   91 (161)
T 2z90_A           14 HATPEFGGNLQKVLVDLIELSLQGKQAHWNVV--GSNFRDLHLQLDELVDFAREGSDTIAERMRALDAVPDGRSDTVAAT   91 (161)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEE--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhhhhheE--CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHhH
Confidence            35678999999999999999999976665566  679999999999999999999999999999999999985       


Q ss_pred             -cCCCCCCcC-ccccccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhhh
Q 028202          163 -SIMQPPSEF-DHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILLV  210 (212)
Q Consensus       163 -~I~~P~~e~-~~~e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~~  210 (212)
                       .|+..+.++ +..+....+...|..+...+++++..|.+. |++|..+.
T Consensus        92 s~i~e~~~~~~~~~eml~~~l~~~~~~i~~~r~~i~~a~~~-D~~T~dll  140 (161)
T 2z90_A           92 TTLPEFPAFERSTADVVDLITTRINATVDTIRRVHDAVDAE-DPSTADLL  140 (161)
T ss_dssp             CCSCCCCSSCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CHHHHHHH
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CHHHHHHH
Confidence             466555543 444556777777788888999999999999 99997654

>2xgw_A Peroxide resistance protein; metal binding protein; 2.10A {Streptococcus pyogenes}

Probab=99.10  E-value=1.2e-09  Score=92.13  Aligned_cols=119  Identities=11%  Similarity=0.034  Sum_probs=101.3

Q ss_pred             cccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeec-------
Q 028202           90 KYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLH-------  162 (212)
Q Consensus        90 ~~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~-------  162 (212)
                      +-.+++.+.||+.+..|+.+..+|....-+..  +.++..+..+|.++++|+++||..+.++|+..||.|...       
T Consensus        39 ~~~~~vi~~LN~~LAde~~l~~k~~~~HWnV~--G~~F~~LH~~~ee~~~e~~~haD~lAERIl~LGG~P~~t~~~~~~~  116 (199)
T 2xgw_A           39 SKNEKTKAVLNQAVADLSVAASIVHQVHWYMR--GPGFLYLHPKMDELLDSLNANLDEVSERLITIGGAPYSTLAEFSKH  116 (199)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
Confidence            56778999999999999999999966665555  668999999999999999999999999999999999985       


Q ss_pred             -cCCCCCCcC--ccccccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhhh
Q 028202          163 -SIMQPPSEF--DHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILLV  210 (212)
Q Consensus       163 -~I~~P~~e~--~~~e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~~  210 (212)
                       .|+..+.++  +..+....+...|..+...+++++..|.+.+|++|..+.
T Consensus       117 s~i~e~~~g~~~~~~emL~~ll~~e~~~i~~~re~i~~aee~~D~~T~dll  167 (199)
T 2xgw_A          117 SKLDEAKGTYDKTVAQHLARLVEVYLYLSSLYQVGLDITDEEGDAGTNDLF  167 (199)
T ss_dssp             CSCCCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred             CCCCcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
Confidence             466555544  555667777778888888999999999999999997654

>2c2j_A DNA-binding stress response protein; DNA-binding protein, DPS; 2.05A {Deinococcus radiodurans} PDB: 2c6r_A

Probab=99.08  E-value=1e-09  Score=93.48  Aligned_cols=117  Identities=9%  Similarity=0.067  Sum_probs=100.2

Q ss_pred             ccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeec--------
Q 028202           91 YEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLH--------  162 (212)
Q Consensus        91 ~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~--------  162 (212)
                      -.+++++.||+.+..|+.+..+|+..+-+..  ++++..+..+|.++++|+++|+..+.++|...||.|...        
T Consensus        44 ~~~~vi~~LN~~LAde~~l~~q~~~~HWnv~--G~~F~~LHe~fee~~~e~~~haD~lAERIl~LGG~P~~t~~~~~~~s  121 (211)
T 2c2j_A           44 DLKKSVQALQNTLTELQALQLQTKQAHWNVS--GTLWYTLHELLQDHYEGISKFADDVAERQLSVGASSDGRAITIVAAS  121 (211)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHhC
Confidence            4578999999999999999999998777777  789999999999999999999999999999999999884        


Q ss_pred             cCCCCCCc-CccccccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhhh
Q 028202          163 SIMQPPSE-FDHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILLV  210 (212)
Q Consensus       163 ~I~~P~~e-~~~~e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~~  210 (212)
                      .|+..+.+ ++..++...+...|..+...++++|..|.+. |++|..+.
T Consensus       122 ~i~e~~~g~~~~~emL~~ll~~e~~~i~~~re~i~~aee~-D~~T~dLl  169 (211)
T 2c2j_A          122 RLPEIPGGFLDDAQVIQFFTYQYETVGQRIHQRVGDVEKV-DPTTANLL  169 (211)
T ss_dssp             CSCCCCCSCEEHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CHHHHHHH
T ss_pred             CCcccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CHHHHHHH
Confidence            46655554 3444566777777888888999999999999 99997654

>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A

Probab=99.07  E-value=7.5e-10  Score=91.46  Aligned_cols=102  Identities=11%  Similarity=0.003  Sum_probs=80.0

Q ss_pred             cHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccCCCCCCcC
Q 028202           92 EDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPSEF  171 (212)
Q Consensus        92 s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I~~P~~e~  171 (212)
                      ..+.++.||+++.-|.+|.++|+.+|.+++  ++|++.+|++|++.|.+|++||.++++++   ||      |  +.   
T Consensus         4 ~~~T~~nL~~afagEs~A~~~Y~~~A~~A~--~eG~~~iA~~F~~~A~~E~~HA~~~~~~L---~~------i--~~---   67 (170)
T 3pwf_A            4 RTMTKKFLEEAFAGESMAHMRYLIFAEKAE--QEGFPNIAKLFRAIAYAEFVHAKNHFIAL---GK------L--GK---   67 (170)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHT---TC------C--CC---
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HcCHHHHHHHHHHHHHHHHHHHHHHHHHH---cC------C--CC---
Confidence            357889999999999999999999999999  55999999999999999999999999995   33      1  11   


Q ss_pred             ccccccccHHHHHHH-HHHHHHHHHHHHHhcCChhhhhhh
Q 028202          172 DHAEKGDALYGKFSG-LTAALNHLIYSISRLKSYNVILLV  210 (212)
Q Consensus       172 ~~~e~~d~l~a~E~a-Lt~~Ine~i~~~~~~kD~~~~~~~  210 (212)
                       ..+.+......|.. .+..|.+.+..+.++||+.+..++
T Consensus        68 -t~enL~~a~~gE~~e~~~mY~~~a~~A~eeg~~~~a~~f  106 (170)
T 3pwf_A           68 -TPENLQMGIEGETFEVEEMYPVYNKAAEFQGEKEAVRTT  106 (170)
T ss_dssp             -HHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHH
T ss_pred             -hHHHHHHHHHhHHHHHHHHHHHHHHHHHHCCCHHHHHHH
Confidence             12222223333333 345788999999999999886543

>3iq1_A DPS family protein; csgid, SAD, niaid, metal transport, STRU genomics, center for structural genomics of infectious DISE; 1.67A {Vibrio cholerae o1 biovar el tor}

Probab=99.02  E-value=5.1e-09  Score=84.46  Aligned_cols=118  Identities=11%  Similarity=0.018  Sum_probs=97.2

Q ss_pred             ccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeec--------
Q 028202           91 YEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLH--------  162 (212)
Q Consensus        91 ~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~--------  162 (212)
                      -.+++.+.||..+..++....+|... .|.=. +.++..+..+|.++++++++|+..+.+++...||.|...        
T Consensus        15 ~~~~v~~~Ln~~LAd~~~l~~k~~~~-HWnv~-G~~F~~lH~~~ee~~~~~~~~~D~lAERI~~LGg~P~~t~~~~~~~s   92 (159)
T 3iq1_A           15 QSQKLANALNNLLANYQVFYMNTRGY-HWNIQ-GKEFFELHAKFEEIYTDLQLKIDELAERILTLSARPMHSFSGYLKAA   92 (159)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHCC-STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhh-heeeE-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHC
Confidence            34578999999999999999999876 44333 568999999999999999999999999999999999863        


Q ss_pred             cCCCCCCcCccccccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhhh
Q 028202          163 SIMQPPSEFDHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILLV  210 (212)
Q Consensus       163 ~I~~P~~e~~~~e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~~  210 (212)
                      .|+.++..++..+....+...+..+...+++.+..|.+.+|++|.-+.
T Consensus        93 ~i~e~~~~~~~~eml~~ll~~~~~~i~~~r~~i~~ae~~~D~~T~dll  140 (159)
T 3iq1_A           93 QIKEHTDSIDGRSSMQGLVDGFSILLHQQRDILELAGETGDEGTSALM  140 (159)
T ss_dssp             SSCCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred             CCCccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHcCCHHHHHHH
Confidence            366554444445556667777777888999999999999999997653

>3ak8_A DNA protection during starvation protein; DPS-like protein, dodecamer, iron-binding protein, metal BIN protein, oxidoreductase; HET: DNA; 1.25A {Salmonella enterica subsp} PDB: 3ak9_A* 1f33_A* 1f30_A* 1dps_A 1jts_A* 1jre_A* 1l8h_A* 1l8i_A* 4dyu_A*

Probab=99.00  E-value=3.5e-09  Score=86.31  Aligned_cols=115  Identities=9%  Similarity=0.075  Sum_probs=95.4

Q ss_pred             ccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeec--------
Q 028202           91 YEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLH--------  162 (212)
Q Consensus        91 ~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~--------  162 (212)
                      -.+++.+.||+.+..|+.+.++|....-+..  ++++..+..+|.++++|+++|+..+.++|...||.|...        
T Consensus        25 ~~~~vi~~Ln~~LA~~~~l~~k~~~~hw~v~--G~~f~~lh~~~ee~~~e~~~~aD~lAERI~~LGg~P~~t~~~~~~~s  102 (167)
T 3ak8_A           25 DKKATVELLNRQVIQFIDLSLITKQAHWNMR--GANFIAVHEMLDGFRTALTDHLDTMAERAVQLGGVALGTTQVINSKT  102 (167)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCB--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhheeE--CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHC
Confidence            3467999999999999999999977665555  789999999999999999999999999999999999986        


Q ss_pred             cCCCCCCc-CccccccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhhh
Q 028202          163 SIMQPPSE-FDHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILLV  210 (212)
Q Consensus       163 ~I~~P~~e-~~~~e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~~  210 (212)
                      .|+..+.+ ++..+....+...|..+...+++++..|.   |++|.-+.
T Consensus       103 ~i~e~~~~~~~~~eml~~~l~~~~~~i~~~r~~i~~a~---D~~T~dll  148 (167)
T 3ak8_A          103 PLKSYPLDIHNVQDHLKELADRYAVVANDVRKAIGEAK---DEDTADIF  148 (167)
T ss_dssp             CSCCCCSSCCBHHHHHHHHHHHHHHHHHHHHHHHHHCC---SHHHHHHH
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhC---CHHHHHHH
Confidence            56665554 34445566677777777788999998885   99987653

>3kwo_A Putative bacterioferritin; alpha-helix, bacterial ferritin fold, structural genomics, center for structural genomics of infectious diseases; 1.99A {Campylobacter jejuni} SCOP: a.25.1.0

Probab=98.99  E-value=5.9e-09  Score=83.54  Aligned_cols=115  Identities=10%  Similarity=0.032  Sum_probs=98.7

Q ss_pred             HHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeee--------ccCC
Q 028202           94 ECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKL--------HSIM  165 (212)
Q Consensus        94 eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l--------~~I~  165 (212)
                      ++.+.||..+..++....+|....-+..  +.++..+..+|.++++++++|+..+.+++...||.|..        ..|+
T Consensus         5 ~~~~~Ln~~LAd~~~l~~k~~~~HWnv~--G~~F~~lH~~~ee~~~~~~~~~D~iAERI~~LGg~P~~t~~~~~~~s~i~   82 (152)
T 3kwo_A            5 SVTKQLLQMQADAHHLWVKFHNYHWNVK--GLQFFSIHEYTEKAYEEMAELFDSCAERVLQLGEKAITCQKVLMENAKSP   82 (152)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHBC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCHHHHHHHCCSC
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhheeeE--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHhHCCCC
Confidence            5789999999999999999998776666  66899999999999999999999999999999999986        5566


Q ss_pred             CCCCcC-ccccccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhhh
Q 028202          166 QPPSEF-DHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILLV  210 (212)
Q Consensus       166 ~P~~e~-~~~e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~~  210 (212)
                      .++.++ +..+....+...+..+...+++.|..|.+.+|++|.-+.
T Consensus        83 e~~~~~~~~~eml~~~l~~~~~~i~~~r~~i~~a~~~~D~~T~dll  128 (152)
T 3kwo_A           83 KVAKDCFTPLEVIELIKQDYEYLLAEFKKLNEAAEKESDTTTAAFA  128 (152)
T ss_dssp             CCCCSCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
Confidence            666654 555666767777777888999999999999999997653

>4eve_A Neutrophil-activating protein; dodecamer, four-helix bundle, metal transport; 2.10A {Helicobacter pylori} PDB: 4evd_A 3t9j_A 3ta8_A 4evb_A 4evc_A 1ji4_A

Probab=98.98  E-value=5.5e-09  Score=85.15  Aligned_cols=117  Identities=8%  Similarity=0.008  Sum_probs=97.5

Q ss_pred             cHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeee--------cc
Q 028202           92 EDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKL--------HS  163 (212)
Q Consensus        92 s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l--------~~  163 (212)
                      .+++.+.||+.+..++....+|... .|.=. +.++..+..+|.++++++++|+..+.++|...||.|..        ..
T Consensus        20 ~~~v~~~Ln~~LAd~~~l~~k~~~~-HWnv~-G~~F~~lH~~~ee~~~e~~~~~D~lAERI~~LGg~P~~t~~~~~~~s~   97 (164)
T 4eve_A           20 HMKTFEILKHLQADAIVLFMKVHNF-HWNVK-GTDFFNVHKATEEIYEEFADMFDDLAERIVQLGHHPLVTLSEAIKLTR   97 (164)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHHHH-HHHCC-STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHh-hhhee-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHcC
Confidence            4468999999999999999999876 44333 56899999999999999999999999999999999886        34


Q ss_pred             CCCCCCcC-ccccccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhhh
Q 028202          164 IMQPPSEF-DHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILLV  210 (212)
Q Consensus       164 I~~P~~e~-~~~e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~~  210 (212)
                      |+.++.++ +..+....+...+..+...+++.|..|.+.+|++|.-+.
T Consensus        98 i~e~~~~~~~~~eml~~ll~~~~~~i~~~r~~i~~aee~~D~~T~dll  145 (164)
T 4eve_A           98 VKEETKTSFHSKDIFKEILEDYKHLEKEFKELSNTAEKEGDKVTVTYA  145 (164)
T ss_dssp             SCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred             CCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
Confidence            56655555 555667777777788888999999999999999997653

>4di0_A Rubrerythrin; ssgcid, seattle structural genomics center for infectious DI peroxidase, oxidoreductase; 1.90A {Burkholderia pseudomallei}

Probab=98.90  E-value=7.1e-09  Score=83.35  Aligned_cols=109  Identities=14%  Similarity=0.107  Sum_probs=80.9

Q ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccCCCCCCcCc
Q 028202           93 DECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPSEFD  172 (212)
Q Consensus        93 ~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I~~P~~e~~  172 (212)
                      .+.++.||.++.-|.+|.+.|+.++..+++  +|++.+|++|+..|.+|++||.++++++...|+ |. ..+  |. + +
T Consensus        11 ~~t~~nL~~afagEs~A~~~Y~~~A~~A~~--eG~~~iA~~F~~~A~~E~~HA~~~~~~L~~~~~-p~-~~~--~~-~-~   82 (144)
T 4di0_A           11 SKTEENLKYAFAGESQANRRYLYFASKADV--EGQNDIAALFRSTAEGETGHAHGHLEYLEAVGD-PA-TGL--PF-G-T   82 (144)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTCHHHHHHHHHHHHHHHHHHHHHHHHHTTTCC-TT-TSC--CC-S-S
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CChHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-cc-cCC--CC-C-c
Confidence            468999999999999999999999999994  599999999999999999999999999876553 21 111  11 0 0


Q ss_pred             cccccccHHHHHHHH-HHHHHHHHHHHHhcCChhhhhh
Q 028202          173 HAEKGDALYGKFSGL-TAALNHLIYSISRLKSYNVILL  209 (212)
Q Consensus       173 ~~e~~d~l~a~E~aL-t~~Ine~i~~~~~~kD~~~~~~  209 (212)
                      ..+.+....+-|..- +..|...+..+.++|+.....+
T Consensus        83 T~enL~~A~~GE~~e~~~~Y~~~a~~A~~eG~~~ia~~  120 (144)
T 4di0_A           83 SRQNLQSAIAGETHEYTDMYPGMAKTARDEGFEEIANW  120 (144)
T ss_dssp             HHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHH
T ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHHHHHHCCcHHHHHH
Confidence            111122233333333 2368889999999998876554

>2oh3_A Rubrerythrin, COG1633: uncharacterized conserved protein; ZP_00055496.1, COG1633: uncharacterized conSer protein; HET: MSE PGE; 2.00A {Magnetospirillum magnetotacticum} SCOP: a.25.1.8

Probab=97.88  E-value=0.00016  Score=57.91  Aligned_cols=60  Identities=12%  Similarity=0.119  Sum_probs=55.9

Q ss_pred             HHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 028202           94 ECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLR  155 (212)
Q Consensus        94 eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~R  155 (212)
                      .+.+.|+..|..|..+..+|..++..++  +++.+.+++.|+..|.+|+.|+..|.++...+
T Consensus         5 ~~~e~L~~Ai~~E~~~~~~Y~~lA~~~~--~~~~~~~k~~f~~LA~eE~~H~~~l~~~~~~~   64 (167)
T 2oh3_A            5 TLAEFLAHAIALETEAAERYVELADMME--AHNNLDTATVFRDMARFSTLHGDEIKQRSRAL   64 (167)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            4789999999999999999999999888  56899999999999999999999999998774

>4a25_A DPS, ferritin DPS family protein; metal binding protein, detoxification process; 2.00A {Kineococcus radiotolerans}

Probab=97.60  E-value=0.00087  Score=54.54  Aligned_cols=116  Identities=14%  Similarity=0.051  Sum_probs=79.5

Q ss_pred             ccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeec-------c
Q 028202           91 YEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLH-------S  163 (212)
Q Consensus        91 ~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~-------~  163 (212)
                      -++++.+.||..+...+.-...+....-.-.  .-.+..+-.+|.+++++.++|+..+.+++...||.|.-.       .
T Consensus        21 a~~~i~~~Ln~~LAd~~~Ly~k~k~~HWnV~--G~~F~~lH~~fee~y~e~~~~~D~iAERI~~LGg~P~~~~~~~~~~~   98 (169)
T 4a25_A           21 ASSRLNAGLQEVLVDLTALHLQGKQAHWNIV--GENWRDLHLQLDTLVEAARGFSDDVAERMRAVGGVPDARPQTVAASR   98 (169)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHEE--SSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhceeeE--CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCccHHHHHHhc
Confidence            4578999999998888876666654443333  447889999999999999999999999999999987432       1


Q ss_pred             CCCC-CCcCccccccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhh
Q 028202          164 IMQP-PSEFDHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILL  209 (212)
Q Consensus       164 I~~P-~~e~~~~e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~  209 (212)
                      +..+ +...+..+....+......+...+++++..+. .+|.+|.-+
T Consensus        99 ~~~~~~~~~~~~~mv~~l~~~~~~~~~~~r~~~~~ae-~~D~~T~dl  144 (169)
T 4a25_A           99 IGDVGPDEIDTRACVEAIVALVRHTVDTIRRVHDPID-AEDPASADL  144 (169)
T ss_dssp             SCCCCSSCEEHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCHHHHHH
T ss_pred             CccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCHHHHHH
Confidence            2222 22222222333344444444557788887774 589988654

>2fzf_A Hypothetical protein; structural genomics, southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI; 2.70A {Pyrococcus furiosus} SCOP: a.25.1.1

Probab=97.41  E-value=0.00081  Score=53.86  Aligned_cols=61  Identities=20%  Similarity=0.202  Sum_probs=54.8

Q ss_pred             HHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhc-CCee
Q 028202           94 ECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLR-GGKV  159 (212)
Q Consensus        94 eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~R-GG~V  159 (212)
                      .+.+.|+..+..|..+.+.|..++..+.  +   +.+++.|..-|.+|++|+..|.+++..+ |+.+
T Consensus        20 ~~~e~L~~A~~~E~~a~~~Y~~~A~~~~--~---~~~~~~f~~lA~~E~~H~~~l~~~~~~l~g~~~   81 (175)
T 2fzf_A           20 SLEELLGMAIKAEIGAREFYKSLAEKIK--I---EALKEKINWLAEEEKKHEALLRKLYSQMFPGKE   81 (175)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHSCC--C---TTHHHHHHHHHHHTHHHHHHHHHHHHHHSTTCC
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHCC--C---HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence            5789999999999999999999999876  3   8999999999999999999999999986 4433

>4etr_A Putative uncharacterized protein; DUF2383, domain of unknown function, cytoplasmic, unknown FU; 2.25A {Pseudomonas aeruginosa}

Probab=97.11  E-value=0.0053  Score=48.80  Aligned_cols=72  Identities=18%  Similarity=0.116  Sum_probs=59.1

Q ss_pred             hcccccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeecc
Q 028202           87 ARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHS  163 (212)
Q Consensus        87 ~Rq~~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~  163 (212)
                      +-+.+++++++.||+.|..++.+...|-..+.-.+     =+.+..+|...+.+...|+..|-.++...||.|...+
T Consensus         4 ~~~~~~~~~i~~Ln~Li~~~~D~~~gY~~aae~~~-----d~~lk~~f~~~a~~~~~~~~eL~~~i~~lGg~p~~~~   75 (153)
T 4etr_A            4 MNQTNLDDTLDVLNDLLQTSKDGEAGFHACAEDLR-----DPQLKAAMLEQSRDCAAAADELERIVLELGGKPKDST   75 (153)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCC----
T ss_pred             hhHhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            33457789999999999999999999999776543     4689999999999999999999999999999987554

>3qhb_A Symerythrin, ORF180; four-helix bundle, carboxylate bridged-DIIRON, ferritin-like superfamily, metal transport; 1.20A {Cyanophora paradoxa} PDB: 3qhc_A 3sid_A

Probab=96.78  E-value=0.0024  Score=53.12  Aligned_cols=111  Identities=14%  Similarity=0.098  Sum_probs=77.5

Q ss_pred             HHHHHHHHhhhhhhHH-HHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeec---------c
Q 028202           94 ECEAAINEQINVEYNV-SYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLH---------S  163 (212)
Q Consensus        94 eve~aLNeQIn~El~A-Sy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~---------~  163 (212)
                      ...+.|+..+.-|.+. ...|..++.-.+++  |++.+|+.|+.-+..|++||.++.+++...++.+.-+         .
T Consensus        24 ~T~eNL~~A~~GE~~E~~~~Y~~fA~~A~~E--G~~~IA~~F~~~A~~E~~HA~r~~kll~~l~~~~~~~~~~~~~~v~~  101 (179)
T 3qhb_A           24 NTDANAASSIEVEMYECDCMYPTFAEIARRS--GQPEIGAMFDAIAKEEGMHAQLLTKLYSELEVKDSAETLEAKRLVST  101 (179)
T ss_dssp             SHHHHHHHHHHHHHHHHHTHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCCCCHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHhHHHHHHHHHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccc
Confidence            3568888999999999 78999999999966  9999999999999999999999999997655542100         1


Q ss_pred             CCCCCCcCcc-ccccccHHHHHHHHH-------HHHHHHHHHHHhcCChhhhh
Q 028202          164 IMQPPSEFDH-AEKGDALYGKFSGLT-------AALNHLIYSISRLKSYNVIL  208 (212)
Q Consensus       164 I~~P~~e~~~-~e~~d~l~a~E~aLt-------~~Ine~i~~~~~~kD~~~~~  208 (212)
                      ...|.....+ .+  +...+++.++.       ..+.+.+..+.++|+-....
T Consensus       102 ~~~p~~~~~~T~e--N~~~~L~~A~~GE~~E~~~mYp~fA~~A~eEG~~eiA~  152 (179)
T 3qhb_A          102 IESQIDAVASDSR--GLRRALETALEVETIESQKTYPAFAKLAAEQGNMEVAT  152 (179)
T ss_dssp             HHHTHHHHHHSHH--HHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTCHHHHH
T ss_pred             ccccccccCcHHH--HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHCCCHHHHH
Confidence            1112100000 00  11233555544       25788888999998766543

>3k6c_A Uncharacterized protein NE0167; structural genomics, MCSG, unknown function protein, PSI, PR structure initiative; 2.20A {Nitrosomonas europaea}

Probab=95.84  E-value=0.045  Score=41.23  Aligned_cols=57  Identities=19%  Similarity=0.273  Sum_probs=50.0

Q ss_pred             HHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 028202           94 ECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRG  156 (212)
Q Consensus        94 eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RG  156 (212)
                      ++..+|+ -|.-|+.|.+.|.+++.-++     -+.+-+.|.+-++||.+|+..|++++..++
T Consensus        19 d~~Rai~-sl~~EleAI~~Y~q~a~~~~-----d~~~k~vl~~i~~EEkeH~g~~lelLrr~D   75 (95)
T 3k6c_A           19 DMHRAII-SLREELEAVDLYNQRVNACK-----DKELKAILAHNRDEEKEHAAMLLEWIRRCD   75 (95)
T ss_dssp             HHHHHHH-HHHHHHHHHHHHHHHHHHCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHH-HHHHHHHHHHHHHHHHHhCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            4777887 56789999999999999988     467788899999999999999999988765

>1zpy_A Hypothetical protein NE0167; structural genomics, MCSG, PSI, protein structure initiative; 2.20A {Nitrosomonas europaea atcc 19718} PDB: 3k6c_A

Probab=95.76  E-value=0.051  Score=40.92  Aligned_cols=57  Identities=19%  Similarity=0.271  Sum_probs=48.7

Q ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 028202           93 DECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLR  155 (212)
Q Consensus        93 ~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~R  155 (212)
                      .++..+|. -|-.|+.|.+.|.+++.-++     -+.+-+.+.+-++||++|+-.|.++|...
T Consensus        18 ~d~~rai~-aL~~EleAI~~Y~q~A~~t~-----D~evk~vl~~iadEEkeH~g~~l~~Lrr~   74 (95)
T 1zpy_A           18 RDMHRAII-SLREELEAVDLYNQRVNACK-----DKELKAILAHNRDEEKEHAAMLLEWIRRC   74 (95)
T ss_dssp             HHHHHHHH-HHHHHHHHHHHHHHHHHHCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHH-HHHHHHHHHHHHHHHHHhCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            35677788 55599999999999999988     35677888899999999999999998876

>3fse_A Two-domain protein containing DJ-1/THIJ/PFPI-like ferritin-like domains; structural genomics; HET: MSE CSX; 1.90A {Anabaena variabilis atcc 29413}

Probab=95.53  E-value=0.098  Score=47.47  Aligned_cols=113  Identities=13%  Similarity=0.085  Sum_probs=81.8

Q ss_pred             hh-cccccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccC
Q 028202           86 LA-RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSI  164 (212)
Q Consensus        86 ~~-Rq~~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I  164 (212)
                      .+ |-.-..++..+||..+..|..+...|...+.     ++.-+++-+.|.+-.+++++|+++|-+|+.+.||+|..+..
T Consensus       201 ~~~~~~~~~~~v~~ln~a~~ge~~~~~a~e~~a~-----~~~d~~~~~~~~~i~~~~~~h~~~l~~~~~~~g~~~~~~~~  275 (365)
T 3fse_A          201 DAWGGSTKGDIVRGLNTALGGERYSLEALEKYTE-----KESDVEAKALFQEMITNKQRHIEYLETYLTRLGEKPSLSAN  275 (365)
T ss_dssp             HHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGSCC
T ss_pred             hhhcCCchhhhhHHHHHHhhcChhHHHHHHHHHH-----hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCcCcc
Confidence            44 5567789999999999999999888877665     45689999999999999999999999999999999997664


Q ss_pred             C-----CCCCcCccccccccHHHHHHHHHH---HHHHHHHHHHhcCChhh
Q 028202          165 M-----QPPSEFDHAEKGDALYGKFSGLTA---ALNHLIYSISRLKSYNV  206 (212)
Q Consensus       165 ~-----~P~~e~~~~e~~d~l~a~E~aLt~---~Ine~i~~~~~~kD~~~  206 (212)
                      -     .-...+.+   -+..+.++.+|..   .|....+.|...-|-.+
T Consensus       276 ~~~~~a~~~~~~~~---~~~~~~l~~al~~~~~gi~~~~~l~~~~~dp~~  322 (365)
T 3fse_A          276 IANQYAKVKTALTG---SDDIYQIRSALGDIQTGIGDIGNLCAMYTDPIA  322 (365)
T ss_dssp             ------------------CHHHHHHHHHHHHHHHHHHHHHHTTTCSCHHH
T ss_pred             hhHHHHHHHHHhcC---CChHHHHHHHhcchhhhHHHHHHHHHhcCCHHH
Confidence            3     22222222   2445667777764   55556666655555544

>1zuj_A Hypothetical protein llacc01001955; oxidative stress, DPS, DNA binding, lactic acid bacteria, DN protein; 2.90A {Lactococcus lactis} SCOP: a.25.1.1

Probab=95.35  E-value=0.14  Score=42.10  Aligned_cols=113  Identities=11%  Similarity=0.044  Sum_probs=77.8

Q ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeee--------e-cc
Q 028202           93 DECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVK--------L-HS  163 (212)
Q Consensus        93 ~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~--------l-~~  163 (212)
                      +.+.+.||..+..-+.-...+ --+.|.    |-=|+|-.+|.++..+.+++...+-+++...||.|.        + ..
T Consensus        24 ~~~~~~Ln~~LAd~~~Ly~k~-~~~HWn----V~G~~FH~~fee~y~~~~~~~D~iAERi~~LG~~p~~t~~e~~~~~s~   98 (179)
T 1zuj_A           24 PTAGAMLSHVLSNIFYEKISL-MQAGLY----AKSANYRIKFREIALKEDEWFYLISEQLLDENELVPTTLDEFVSNHKF   98 (179)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHH-HHHHHH----CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCCS
T ss_pred             HHHHHHHHHHHHHHHHHHHHH-hcccee----eEChhHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHhcCc
Confidence            467788997776655433333 334453    334566999999999999999999999999999864        4 55


Q ss_pred             CCCCCCcC--ccccccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhhh
Q 028202          164 IMQPPSEF--DHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILLV  210 (212)
Q Consensus       164 I~~P~~e~--~~~e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~~  210 (212)
                      |+..+.++  +..+....+..--..+...+++++..+.+.+|++|.-+.
T Consensus        99 i~e~~~~~~~~~~e~l~~l~~d~~~~~~~~r~~i~~a~e~~D~~Tadll  147 (179)
T 1zuj_A           99 IENDPKAKYWTDEALIENFINDFQNQNLFIGRAIKLAQKEEKFSLELAI  147 (179)
T ss_dssp             CCCCTTGGGSCHHHHHHHHHHHHHHHHHHHHHHTHHHHHTTCHHHHHHH
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
Confidence            66655543  322333333333444446788899999999999987553

>1zs3_A Lactococcus lactis Mg1363 DPSA; oxidative stress, DNA binding, lactic acid bacteria, DNA binding protein; 2.70A {Lactococcus lactis} SCOP: a.25.1.1

Probab=95.07  E-value=0.2  Score=41.26  Aligned_cols=113  Identities=10%  Similarity=0.060  Sum_probs=76.4

Q ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeee--------e-cc
Q 028202           93 DECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVK--------L-HS  163 (212)
Q Consensus        93 ~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~--------l-~~  163 (212)
                      +.+.+.||..+..-+.-...+ --+.|.    |-=|+|-.+|.++..+.+++...+-+++...||.|.        + ..
T Consensus        25 ~~~~~~Ln~~LAd~~~Ly~k~-k~~HWn----V~G~~FH~~fee~y~~~~~~~D~iAERi~~LG~~p~~t~~e~~~~~s~   99 (182)
T 1zs3_A           25 PTAGAMLGHVLSNLFIENIRL-TQAGIY----AKSPVKCEYLREIAQREVEYFFKISDLLLDENEIVPSTTEEFLKYHKF   99 (182)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHH-HHHHHH----CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCCS
T ss_pred             HHHHHHHHHHHHHHHHHHHHH-hcccee----eEChhHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHhcCc
Confidence            357788887776655443333 334453    334566999999999999999999999999999864        3 45


Q ss_pred             CCCCCCcC--ccccccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhhh
Q 028202          164 IMQPPSEF--DHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILLV  210 (212)
Q Consensus       164 I~~P~~e~--~~~e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~~  210 (212)
                      |+..+.++  +..+....+..--..+...+++++..+.+.+|++|.-+.
T Consensus       100 i~e~~~~~~~~~~e~l~~L~~d~~~~~~~~r~~i~~A~e~~D~~Tadll  148 (182)
T 1zs3_A          100 ITEDPKAKYWTDEDLLESFIVDFQAQNMFITRAIKLANKEEKFALAAGV  148 (182)
T ss_dssp             CCCCGGGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHhHHHHH
Confidence            55554432  222333333333344445788899999999999987553

>1vjx_A Putative ferritin-like DIIRON-carboxylate protein; structural genomics, joint center for structural genomics, J protein structure initiative; 2.30A {Thermotoga maritima} SCOP: a.25.1.1

Probab=94.63  E-value=0.048  Score=42.92  Aligned_cols=57  Identities=23%  Similarity=0.238  Sum_probs=50.1

Q ss_pred             ccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 028202           91 YEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQN  153 (212)
Q Consensus        91 ~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln  153 (212)
                      -+....+.|...|..|..+...|..++. ..     -+.+.+.|..-|.+|++|...|.++..
T Consensus        11 ~~~~~~e~L~~Ai~~E~~~~~~Y~~lA~-~~-----~~~~k~lF~~LA~eE~~H~~~l~~l~~   67 (157)
T 1vjx_A           11 HHMKVSDILTVAIRLEEEGERFYRELSE-HF-----NGEIKKTFLELADQERIHAEIFRKMSD   67 (157)
T ss_dssp             BSCBHHHHHHHHHHHHHHHHHHHHHHTT-SC-----CSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHH-cC-----CHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            3456778999999999999999999998 43     589999999999999999999999843

>4di0_A Rubrerythrin; ssgcid, seattle structural genomics center for infectious DI peroxidase, oxidoreductase; 1.90A {Burkholderia pseudomallei}

Probab=92.38  E-value=0.33  Score=38.35  Aligned_cols=59  Identities=15%  Similarity=0.268  Sum_probs=52.2

Q ss_pred             HHHHHHHHhhhhhhHHH-HHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 028202           94 ECEAAINEQINVEYNVS-YVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNL  154 (212)
Q Consensus        94 eve~aLNeQIn~El~AS-y~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~  154 (212)
                      ...+-|...+.-|..+. ..|..++..+..+  |++..+++|+.-+..|..|+.++.+.+..
T Consensus        82 ~T~enL~~A~~GE~~e~~~~Y~~~a~~A~~e--G~~~ia~~f~~~a~~E~~Ha~~~~~~l~~  141 (144)
T 4di0_A           82 TSRQNLQSAIAGETHEYTDMYPGMAKTARDE--GFEEIANWFETLAKAERSHANRYTKALDG  141 (144)
T ss_dssp             SHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cHHHHHHHHHHhHHHHHHHHHHHHHHHHHHC--CcHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            45677888899999995 6999999999966  99999999999999999999999988753

>2qqy_A Sigma B operon; dodecameric alpha-helical, ferritin fold, structural genomic protein structure initiative; 2.00A {Bacillus anthracis str}

Probab=91.78  E-value=0.66  Score=34.78  Aligned_cols=65  Identities=12%  Similarity=0.154  Sum_probs=53.0

Q ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCee
Q 028202           93 DECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKV  159 (212)
Q Consensus        93 ~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V  159 (212)
                      ....+.|...+..|-.+...|..+...++.  .+-++...||.....+|.+|+..|-.++.+-++.+
T Consensus        84 ~~~~e~l~~~l~~E~~~~~~~~~~~~~a~~--~~D~~t~~~l~~~~~eee~h~~~l~~~l~~~~~~~  148 (149)
T 2qqy_A           84 EDVREMLEYARQSEYETIKRYEKRKEQAAN--LNMTELVVKLEDMIADETNHMEELDRLLNDKAMVL  148 (149)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTCHHHHHHHHHHHHHHHHHHHHHHHHHC------
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence            357788999999999999999999999884  37889999999999999999999999887666554

>3hl1_A Ferritin like protein; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Caulobacter vibrioides}

Probab=91.76  E-value=0.75  Score=41.28  Aligned_cols=69  Identities=13%  Similarity=0.054  Sum_probs=59.1

Q ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccC
Q 028202           93 DECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSI  164 (212)
Q Consensus        93 ~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I  164 (212)
                      +++.++|+..|.+|+...=.||....--...|   .+.+.-.+.-+.|||-|....-+-++-.||.|.+..-
T Consensus         9 ~~L~~~Lq~Ai~lE~stIp~YL~a~ySi~~~n---~~~~~~i~~V~~eEMlHl~l~aNll~AiGg~p~~~~P   77 (317)
T 3hl1_A            9 PRLYQHFQGAIDLELWTIPYYLTVLYSIKDPT---TVPYRLIQAAVYQEMLHAQLVSNIANAYGYSPTLSAP   77 (317)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHBSCTT---SHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcC---HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCCCC
Confidence            47889999999999999999997665555332   4788889999999999999999999999999988653

>1vjx_A Putative ferritin-like DIIRON-carboxylate protein; structural genomics, joint center for structural genomics, J protein structure initiative; 2.30A {Thermotoga maritima} SCOP: a.25.1.1

Probab=91.59  E-value=0.81  Score=35.73  Aligned_cols=58  Identities=22%  Similarity=0.273  Sum_probs=51.3

Q ss_pred             cHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 028202           92 EDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNL  154 (212)
Q Consensus        92 s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~  154 (212)
                      ......+|...|..|..|...|..++..+.  +   +..-+.|..-+.+|++|...|.+++..
T Consensus        98 ~~~~~~~l~~ai~~E~~a~~~Y~~~a~~~~--d---~~~k~l~~~la~eE~~H~~~l~~~~~~  155 (157)
T 1vjx_A           98 DLTLKEVLDIAISVEKDSIILYYELKDGLV--N---SDAQKTVKKIIDQEKEHLRKLLEMKRE  155 (157)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHHHHCC--S---HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHHHHHHhCC--C---HHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            345788999999999999999999999877  2   688899999999999999999988764

>1j30_A 144AA long hypothetical rubrerythrin; sulerythrin, sulfolobus tokodaii strain 7, FOU bundle, domain swapping, metal binding site plasticity; 1.70A {Sulfolobus tokodaii} SCOP: a.25.1.1

Probab=91.05  E-value=0.73  Score=35.53  Aligned_cols=60  Identities=22%  Similarity=0.305  Sum_probs=53.7

Q ss_pred             HHHHHHHHHhhhhhhHH-HHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 028202           93 DECEAAINEQINVEYNV-SYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNL  154 (212)
Q Consensus        93 ~eve~aLNeQIn~El~A-Sy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~  154 (212)
                      ..+.+.|..-+..|..+ ...|..++..+...  |.+..+.+|+.-+.+|.+|+..+-+.+..
T Consensus        79 ~~~~e~L~~al~~E~~~~~~~y~~~~~~A~~e--gd~~~~~~f~~i~~~E~~H~~~~~~~l~~  139 (144)
T 1j30_A           79 GTLEQMIESAIAGETYEWTQMYPGFAKVAREE--GFPEVAEWFETLARAEKSHAEKFQNVLKQ  139 (144)
T ss_dssp             SSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHc--CcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45778899999999999 79999999999955  89999999999999999999999877643

>1o9i_A Pseudocatalase; oxidoreductase, hexamer, dimanganese catalase, metalloenzyme, preoxidase; HET: MES; 1.33A {Lactobacillus plantarum} SCOP: a.25.1.3 PDB: 1jkv_A 1jku_A

Probab=90.24  E-value=0.57  Score=41.00  Aligned_cols=62  Identities=10%  Similarity=-0.030  Sum_probs=50.0

Q ss_pred             ccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhH-HHHHHHHHHHHHHHHHHHHHHHHhcCCe
Q 028202           91 YEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGL-AKFFKESSEEEREHAEKFMEYQNLRGGK  158 (212)
Q Consensus        91 ~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~Gf-AkFFr~qS~EEreHAekLieyln~RGG~  158 (212)
                      +..-+.+.+-.+ +-|+.|+.+|+..+.-|.  +   ++. ...+..-+.||+.|++.+-..+++.++.
T Consensus        21 ~A~~L~e~~GG~-~GElsAamqYl~Q~~~~~--~---~~~y~dLL~dIatEEl~HlEmva~~I~~L~~g   83 (266)
T 1o9i_A           21 MARRLQESLGGQ-WGETTGMMSFLSQGWAST--G---AEKYKDLLLDTGTEEMAHVEMISTMIGYLLED   83 (266)
T ss_dssp             HHHHHHHHHHST-TSHHHHHHHHHHHHHHCC--S---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             HHHHHHHHhCCC-ccHHHHHHHHHHHHhcCC--C---cHHHHHHHHHHHHHhccHHHHHHHHHHHHcCC
Confidence            333444444433 889999999999999888  2   466 8899999999999999999999999764

>2e0z_A Virus-like particle; bacteriophage, HK97; 3.60A {Pyrococcus furiosus}

Probab=90.02  E-value=0.057  Score=48.88  Aligned_cols=61  Identities=18%  Similarity=0.274  Sum_probs=0.0

Q ss_pred             ccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 028202           91 YEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRG  156 (212)
Q Consensus        91 ~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RG  156 (212)
                      -.+++.++|...|..|+.|...|..++..++.     +..-+.|.+-++||++|+..|.+.+...+
T Consensus        16 ~~~el~~air~ai~~E~eAi~~Y~q~A~~~~d-----~~~K~vl~~ia~EEk~H~~~f~~ll~~l~   76 (345)
T 2e0z_A           16 TKEELMEILRLAIIAELDAINLYEQMARYSED-----ENVRKILLDVAREEKAHVGEFMALLLNLD   76 (345)
T ss_dssp             ------------------------------------------------------------------
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            34578899999999999999999999999884     45667899999999999999998776654

>2fzf_A Hypothetical protein; structural genomics, southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI; 2.70A {Pyrococcus furiosus} SCOP: a.25.1.1

Probab=89.93  E-value=1.6  Score=34.40  Aligned_cols=58  Identities=14%  Similarity=0.100  Sum_probs=51.7

Q ss_pred             cHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 028202           92 EDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNL  154 (212)
Q Consensus        92 s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~  154 (212)
                      ...+..+|...+..|..+...|..++....  +   +...+.|..-+.+|.+|...|-+++..
T Consensus       103 ~~~~~~~L~~ai~~E~~a~~~Y~~~a~~~~--d---~~~r~l~~~ia~eE~~H~~~l~~~l~~  160 (175)
T 2fzf_A          103 VQDIIDLIRWAMKAEEIAAEFYLKLEEMVK--E---EEKKRLMRYLADMERGHYYTLRAEYEL  160 (175)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTSC--S---HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHHhhCC--C---HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            356889999999999999999999999876  2   789999999999999999999887765

>2v8t_A Manganese-containing pseudocatalase; manganese catalase, oxidoreductase; 0.98A {Thermus thermophilus} PDB: 2v8u_A 2cwl_A

Probab=88.52  E-value=0.83  Score=40.68  Aligned_cols=64  Identities=17%  Similarity=0.049  Sum_probs=50.4

Q ss_pred             ccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 028202           91 YEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRG  156 (212)
Q Consensus        91 ~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RG  156 (212)
                      |..-+.+.+-.+ +-|+.++++|+..+.-|... -+++.+...+..-+.||+.|++.+-..+++.+
T Consensus        22 ~A~~L~eq~GG~-~GElsAamqYl~Qs~~~~~~-~~~~~~~dLL~dIatEEL~HlEmvat~I~~L~   85 (302)
T 2v8t_A           22 AAAAVQALLGGR-FGEMSTLMNYMYQSFNFRGK-KALKPYYDLIANIATEELGHIELVAATINSLL   85 (302)
T ss_dssp             HHHHHTHHHHST-TSHHHHHHHHHHHHHHCSCT-TTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCC-ccHHHHHHHHHHHHccCCCC-cchHHHHHHHHHHHHHhccHHHHHHHHHHHHc
Confidence            333444444433 88999999999999998842 23667899999999999999999999888883

>3qhb_A Symerythrin, ORF180; four-helix bundle, carboxylate bridged-DIIRON, ferritin-like superfamily, metal transport; 1.20A {Cyanophora paradoxa} PDB: 3qhc_A 3sid_A

Probab=87.00  E-value=1.9  Score=35.51  Aligned_cols=58  Identities=17%  Similarity=0.122  Sum_probs=50.8

Q ss_pred             HHHHHHHhhhhhhHH-HHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 028202           95 CEAAINEQINVEYNV-SYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNL  154 (212)
Q Consensus        95 ve~aLNeQIn~El~A-Sy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~  154 (212)
                      +.+.|...|.-|..- ...|-.++.-....  |.+..+++|+.-+..|..|+.++-+.+..
T Consensus       116 ~~~~L~~A~~GE~~E~~~mYp~fA~~A~eE--G~~eiA~~F~~ia~~Ek~H~~ry~~ll~~  174 (179)
T 3qhb_A          116 LRRALETALEVETIESQKTYPAFAKLAAEQ--GNMEVATAFEAIVKSETKHANWVKRALEN  174 (179)
T ss_dssp             HHHHHHHHHHHHHHHHHTHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            566688899999974 57899999999976  99999999999999999999999876653

>3uoi_A Bacterioferritin, BFR; structural genomics, TB structural genomics consortium, TBSG ferroxidation and iron storage, cytosol; HET: HEM; 1.90A {Mycobacterium tuberculosis} PDB: 3uof_A* 3qb9_A* 2wtl_A* 3bkn_A*

Probab=86.66  E-value=3.6  Score=31.38  Aligned_cols=60  Identities=13%  Similarity=0.150  Sum_probs=52.9

Q ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 028202           93 DECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNL  154 (212)
Q Consensus        93 ~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~  154 (212)
                      ..+.+.|...+..|..+...|..+...++.  .+-++.+.||.....+|.+|+..|-+++..
T Consensus        83 ~~~~e~l~~~l~~E~~~~~~~~~~~~~A~~--~~D~~t~~~l~~~~~eee~h~~~l~~~l~~  142 (161)
T 3uoi_A           83 QTLREQFEADLAIEYDVLNRLKPGIVMCRE--KQDTTSAVLLEKIVADEEEHIDYLETQLEL  142 (161)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            467888889999999999999999999984  378999999999999999999998887653

>4am5_A Bacterioferritin; metal binding protein, ferroxidase centre, iron storage, DI centre, iron channel, heme binding; HET: HEM; 1.58A {Blastochloris viridis} PDB: 4am2_A* 4am4_A*

Probab=86.25  E-value=3.2  Score=32.17  Aligned_cols=61  Identities=13%  Similarity=0.183  Sum_probs=52.2

Q ss_pred             ccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 028202           91 YEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQN  153 (212)
Q Consensus        91 ~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln  153 (212)
                      ....+.+.+...+..|..+...|..+...|..  .+-+..+.||+.-..||.+|+..|-+++.
T Consensus        79 ~~~~~~e~l~~~l~~E~~~~~~~~~~~~~a~~--~~D~~t~~~l~~il~eEeeH~~~l~~~L~  139 (159)
T 4am5_A           79 IGQTVKEVLESDLAAEREARALYQEGAAYAAS--VGDFPSKNLFEELMGDEEHHIDFLETQLD  139 (159)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34567888899999999999999999999994  48999999999999999999987765443

>2itb_A TRNA-(MS(2)IO(6)A)-hydroxylase, putative; putative ATTH, structural genomics, joint center for structu genomics, JCSG; 2.05A {Pseudomonas putida} SCOP: a.25.1.7

Probab=85.97  E-value=4.5  Score=34.18  Aligned_cols=70  Identities=20%  Similarity=0.294  Sum_probs=56.2

Q ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccCCCCC
Q 028202           93 DECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPP  168 (212)
Q Consensus        93 ~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I~~P~  168 (212)
                      ......|.++-+-|.-|+..=++|=.-|-    ..+++..-+-.-+.||++|-++.++.|.+||  +.++.+.+++
T Consensus        26 ~nl~~iL~DHA~CE~KAA~tAm~Li~rYp----~~~~Lv~~m~~LarEEL~HFeqVl~im~~Rg--i~l~~~~~~~   95 (206)
T 2itb_A           26 ADQETLLIDHKNCEFKAASTALSLIAKYN----THLDLINMMSRLAREELVHHEQVLRLMKRRG--VPLRPVSAGR   95 (206)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHHHHHTT----TCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCCCS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCC----CcHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--CCCCCCCCCH
Confidence            34567888999999999988665533332    5788999999999999999999999999999  5566666654

>3r2k_A Bacterioferritin, BFR; bacterial ferritin, iron binding, iron storage, iron homeost iron release, iron mobilization; 1.55A {Pseudomonas aeruginosa} SCOP: a.25.1.0 PDB: 3r2h_A 3r2l_A 3r2m_A 3r2o_A 3r2r_A 3r2s_A

Probab=85.59  E-value=3  Score=31.68  Aligned_cols=61  Identities=11%  Similarity=0.045  Sum_probs=52.4

Q ss_pred             ccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHH-HHHHHHHHHHHHH
Q 028202           91 YEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEE-EREHAEKFMEYQN  153 (212)
Q Consensus        91 ~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~E-EreHAekLieyln  153 (212)
                      ....+.+.|...+..|..+...|..+...++.  .+-++.+.||..-..+ |.+|+..|-+++.
T Consensus        78 ~~~~~~e~l~~~l~~E~~~~~~~~~~~~~a~~--~~D~~t~~~l~~~~~e~ee~h~~~l~~~l~  139 (154)
T 3r2k_A           78 PGTTVPEMLEADLKLERHVRAALAKGIALCEQ--HKDFVSRDILKAQLADTEEDHAYWLEQQLG  139 (154)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTCHHHHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            33457788888999999999999999999984  3789999999999999 9999998877654

>1nfv_A Bacterioferritin; 24 subunits in the active molecule, DIIRON HAEM Fe-coproporphyrin III cofactor, iron storage-electron complex; HET: FEC; 1.95A {Desulfovibrio desulfuricans} SCOP: a.25.1.1 PDB: 1nf6_A* 1nf4_A*

Probab=84.57  E-value=4.5  Score=31.56  Aligned_cols=58  Identities=14%  Similarity=0.144  Sum_probs=50.2

Q ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 028202           93 DECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQ  152 (212)
Q Consensus        93 ~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyl  152 (212)
                      ..+.+.|...+..|-.+...|..+...++..  +-+....||.....+|.+|+..|-+++
T Consensus        86 ~~~~e~l~~al~~E~~~~~~y~~l~~~a~~~--~D~~t~~~l~~~~~eEe~h~~~l~~~l  143 (179)
T 1nfv_A           86 QAVPVIYESDADQEDATIEAYSQFLKVCKEQ--GDIVTARLFERIIEEEQAHLTYYENIG  143 (179)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4578899999999999999999999999743  678999999999999999997775544

>2y3q_A Bacterioferritin; metal binding protein, redox; HET: HEM; 1.55A {Escherichia coli} PDB: 1bfr_A* 1bcf_A* 2htn_A* 2vxi_A* 3e1j_A* 3e1l_A* 3e1m_A* 3e1n_A* 3e1o_A* 3e1p_A* 3ghq_A* 3e1q_A* 3e2c_A* 3isf_A* 3is8_A* 3ise_A* 3is7_A*

Probab=84.44  E-value=6  Score=29.78  Aligned_cols=60  Identities=13%  Similarity=0.133  Sum_probs=52.1

Q ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 028202           93 DECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNL  154 (212)
Q Consensus        93 ~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~  154 (212)
                      ....+.|...+..|-.+...|..+...++..  +-+....||.....+|.+|...|-+++..
T Consensus        81 ~~~~e~l~~~l~~E~~~~~~y~~~~~~a~~~--~D~~t~~~l~~~~~ee~~h~~~l~~~l~~  140 (158)
T 2y3q_A           81 EDVEEMLRSDLALELDGAKNLREAIGYADSV--HDYVSRDMMIEILRDEEGHIDWLETELDL  140 (158)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4577888999999999999999999999743  67899999999999999999998877643

>3qb9_A Bacterioferritin, BFR; cytosol, structural genomics, TB structural genomics consort TBSGC, metal binding protein; HET: HEM; 2.11A {Mycobacterium tuberculosis} PDB: 2wtl_A* 3bkn_A*

Probab=84.08  E-value=5.5  Score=30.86  Aligned_cols=60  Identities=13%  Similarity=0.164  Sum_probs=52.8

Q ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 028202           93 DECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNL  154 (212)
Q Consensus        93 ~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~  154 (212)
                      ..+.+.|...+..|-.+...|..+...++..  +-++...||..-..||..|+..|.+++..
T Consensus        83 ~~~~e~l~~al~~E~~~~~~y~~l~~~a~~~--~D~~t~~~l~~~l~eEe~h~~~l~~~l~~  142 (174)
T 3qb9_A           83 QTLREQFEADLAIEYDVLNRLKPGIVMCREK--QDTTSAVLLEKIVADEEEHIDYLETQLEL  142 (174)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4567888889999999999999999998843  78899999999999999999999887764

>3gvy_A Bacterioferritin; iron storage, DI-iron, ferroxida activity, heme, metal binding protein; HET: HEM; 2.80A {Rhodobacter sphaeroides} SCOP: a.25.1.1

Probab=83.72  E-value=4.3  Score=30.99  Aligned_cols=59  Identities=10%  Similarity=0.161  Sum_probs=52.1

Q ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 028202           93 DECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQN  153 (212)
Q Consensus        93 ~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln  153 (212)
                      ..+.+.|...+..|..+...|..+...++.  .+-++.+.||..-..+|.+|+..|.+.+.
T Consensus        81 ~~~~e~l~~~l~~E~~~~~~~~~~~~~A~~--~~D~~t~~~l~~~~~eEe~h~~~l~~~l~  139 (161)
T 3gvy_A           81 QTLRETLDADLAAEHDARTLYIEARDHCEK--VRDYPSKMLFEELIADEEGHIDYLETQID  139 (161)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHHHHHHHTT--TTCHHHHTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            457888999999999999999999999984  48899999999999999999998887654

>2fkz_A Bacterioferritin; ferroxidase, DIIRON site, iron T metal binding protein; HET: HEM; 2.00A {Azotobacter vinelandii} SCOP: a.25.1.1 PDB: 2fl0_A* 1sof_A*

Probab=83.62  E-value=6.4  Score=29.37  Aligned_cols=58  Identities=12%  Similarity=0.112  Sum_probs=50.9

Q ss_pred             HHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 028202           94 ECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQN  153 (212)
Q Consensus        94 eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln  153 (212)
                      ...+.|...+..|-.+...|..+...++..  +-++.+.||.....+|.+|...|-+++.
T Consensus        82 ~~~e~l~~~l~~E~~~~~~~~~~~~~a~~~--~D~~t~~~l~~~~~eee~h~~~l~~~l~  139 (155)
T 2fkz_A           82 HTKEMLECDLKLEQAGLPDLKAAIAYCESV--GDYASRELLEDILESEEDHIDWLETQLD  139 (155)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            577889999999999999999999999853  7889999999999999999888776653

>1jgc_A Bacterioferritin, BFR; iron storage protein, metal binding protein; HET: HEM; 2.60A {Rhodobacter capsulatus} SCOP: a.25.1.1

Probab=82.45  E-value=6.7  Score=29.60  Aligned_cols=60  Identities=12%  Similarity=0.137  Sum_probs=52.2

Q ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 028202           93 DECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNL  154 (212)
Q Consensus        93 ~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~  154 (212)
                      ..+.+.|...+..|-.+...|..+...++.  .+-++.+.||.....+|.+|...|-+++..
T Consensus        81 ~~~~e~l~~~l~~E~~~~~~~~~~~~~a~~--~~D~~t~~~l~~~~~ee~~h~~~l~~~l~~  140 (161)
T 1jgc_A           81 EGPRETLECDLAGEHDALKLYREARDYCAE--VGDIVSKNIFESLITDEEGHVDFLETQISL  140 (161)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            356788889999999999999999999984  378999999999999999999988877643

>2oh3_A Rubrerythrin, COG1633: uncharacterized conserved protein; ZP_00055496.1, COG1633: uncharacterized conSer protein; HET: MSE PGE; 2.00A {Magnetospirillum magnetotacticum} SCOP: a.25.1.8

Probab=81.85  E-value=6.3  Score=30.70  Aligned_cols=56  Identities=14%  Similarity=0.015  Sum_probs=49.0

Q ss_pred             HHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 028202           94 ECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNL  154 (212)
Q Consensus        94 eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~  154 (212)
                      .+..+|.-.|..|..+...|..++....     =+..-+.|..-+.+|.+|...|.+.+..
T Consensus        93 ~~~~~l~~A~~~E~~a~~fY~~~a~~~~-----d~~~k~~~~~la~eE~~H~~~l~~~~~~  148 (167)
T 2oh3_A           93 TPYHALRYARDNEIRGMEYYKEAAANSA-----DPEVKRLGADFAAEEAEHVVALDKWIEK  148 (167)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHHCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5678999999999999999999987755     3688889999999999999999987654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	212
d1z6om1	191	a.25.1.1 (M:1-191) (Apo)ferritin {Cabbage looper(T	9e-32
d1z6oa1	200	a.25.1.1 (A:13-212) (Apo)ferritin {Cabbage looper(	4e-31
d1rcda_	171	a.25.1.1 (A:) (Apo)ferritin {Bullfrog (Rana catesb	2e-29
d1bg7a_	173	a.25.1.1 (A:) (Apo)ferritin {Bullfrog (Rana catesb	7e-29
d1r03a_	171	a.25.1.1 (A:) (Apo)ferritin {Human (Homo sapiens),	2e-28
d1lb3a_	179	a.25.1.1 (A:) (Apo)ferritin {Mouse (Mus musculus)	9e-28
d1euma_	161	a.25.1.1 (A:) Non-hem ferritin {Escherichia coli,	2e-23
d1s3qa1	162	a.25.1.1 (A:3-164) Non-hem ferritin {Archaeon Arch	5e-23
d1vlga_	164	a.25.1.1 (A:) Non-hem ferritin {Thermotoga maritim	2e-22
d1krqa_	165	a.25.1.1 (A:) Non-hem ferritin {Campylobacter jeju	1e-21
d2htna1	158	a.25.1.1 (A:1-158) Bacterioferritin (cytochrome b1	8e-13
d1nf4a_	169	a.25.1.1 (A:) Bacterioferritin (cytochrome b1) {De	1e-10
d1jgca_	160	a.25.1.1 (A:) Bacterioferritin (cytochrome b1) {Rh	1e-10
d2fkza1	154	a.25.1.1 (A:1-154) Bacterioferritin (cytochrome b1	1e-07

>d1z6om1 a.25.1.1 (M:1-191) (Apo)ferritin {Cabbage looper(Trichoplusia ni), H chain [TaxId: 7111]} Length = 191

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: (Apo)ferritin
species: Cabbage looper(Trichoplusia ni), H chain [TaxId: 7111]

 Score =  112 bits (281), Expect = 9e-32
 Identities = 25/89 (28%), Positives = 42/89 (47%)

Query: 93  DECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQ 152
             C  ++ +QI +E   S  Y A+ A+F +D +   G A+ F +++ EEREHA K +EY 
Sbjct: 19  RSCRNSMRQQIQMEVGASLQYLAMGAHFSKDVVNRPGFAQLFFDAASEEREHAMKLIEYL 78

Query: 153 NLRGGKVKLHSIMQPPSEFDHAEKGDALY 181
            +RG      S +        +     + 
Sbjct: 79  LMRGELTNDVSSLLQVRPPTRSSWKGGVE 107

>d1z6oa1 a.25.1.1 (A:13-212) (Apo)ferritin {Cabbage looper(Trichoplusia ni), L chain [TaxId: 7111]} Length = 200

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: (Apo)ferritin
species: Cabbage looper(Trichoplusia ni), L chain [TaxId: 7111]

 Score =  110 bits (277), Expect = 4e-31
 Identities = 20/108 (18%), Positives = 35/108 (32%), Gaps = 5/108 (4%)

Query: 87  ARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAE 146
                       +     +    SY Y    AYF+       G +K FK+ S+E      
Sbjct: 17  GEYGSHGNVATELQAYAKLHLERSYDYLLSAAYFNNYQTNRAGFSKLFKKLSDEAWSKTI 76

Query: 147 KFMEYQNLRGGKVKLHSIMQPPSEF-DHAEKGDALYGKFSGLTAALNH 193
             +++   RG K+         +E  ++  +   L      L  AL+ 
Sbjct: 77  DIIKHVTKRGDKMNFDQHSTMKTERKNYTAENHELE----ALAKALDT 120

>d1rcda_ a.25.1.1 (A:) (Apo)ferritin {Bullfrog (Rana catesbeiana) [TaxId: 8400]} Length = 171

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: (Apo)ferritin
species: Bullfrog (Rana catesbeiana) [TaxId: 8400]

 Score =  105 bits (264), Expect = 2e-29
 Identities = 43/84 (51%), Positives = 63/84 (75%)

Query: 85  SLARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREH 144
           S  RQ +  +CEA +N  +N++++ SYVY ++ +YF+RD++AL   AKFF+E SEEE+EH
Sbjct: 1   SQVRQNFHQDCEAGLNRTVNLKFHSSYVYLSMASYFNRDDVALSNFAKFFRERSEEEKEH 60

Query: 145 AEKFMEYQNLRGGKVKLHSIMQPP 168
           AEK +EYQN RGG+V L S+ +P 
Sbjct: 61  AEKLIEYQNQRGGRVFLQSVEKPE 84

>d1bg7a_ a.25.1.1 (A:) (Apo)ferritin {Bullfrog (Rana catesbeiana) [TaxId: 8400]} Length = 173

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: (Apo)ferritin
species: Bullfrog (Rana catesbeiana) [TaxId: 8400]

 Score =  104 bits (260), Expect = 7e-29
 Identities = 51/122 (41%), Positives = 66/122 (54%), Gaps = 2/122 (1%)

Query: 85  SLARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREH 144
           S  RQ +  +CEAAIN  +N+E   SY Y ++  YFDRD+IAL  +AKFFKE S EEREH
Sbjct: 2   SQVRQNFHRDCEAAINRMVNMELYASYTYLSMAFYFDRDDIALHNVAKFFKEQSHEEREH 61

Query: 145 AEKFMEYQNLRGGKVKLHSIMQPP--SEFDHAEKGDALYGKFSGLTAALNHLIYSISRLK 202
           AEK M+ QN RGG++ L  + +P      +  E   A       +  AL  L    S   
Sbjct: 62  AEKLMKDQNKRGGRIVLQDVQKPERDEWGNTLEAMQAALQLEKTVNQALLDLHKVGSDKV 121

Query: 203 SY 204
             
Sbjct: 122 DP 123

>d1r03a_ a.25.1.1 (A:) (Apo)ferritin {Human (Homo sapiens), mitocondial isoform [TaxId: 9606]} Length = 171

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: (Apo)ferritin
species: Human (Homo sapiens), mitocondial isoform [TaxId: 9606]

 Score =  102 bits (256), Expect = 2e-28
 Identities = 40/87 (45%), Positives = 55/87 (63%)

Query: 85  SLARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREH 144
           S  RQ +  + EAAIN QIN+E   SYVY ++  YF RD++AL   +++F   S EE EH
Sbjct: 1   SRVRQNFHPDSEAAINRQINLELYASYVYLSMAYYFSRDDVALNNFSRYFLHQSREETEH 60

Query: 145 AEKFMEYQNLRGGKVKLHSIMQPPSEF 171
           AEK M  QN RGG+++L  I +P  + 
Sbjct: 61  AEKLMRLQNQRGGRIRLQDIKKPEQDD 87

>d1lb3a_ a.25.1.1 (A:) (Apo)ferritin {Mouse (Mus musculus) [TaxId: 10090]} Length = 179

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: (Apo)ferritin
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  101 bits (253), Expect = 9e-28
 Identities = 39/97 (40%), Positives = 56/97 (57%), Gaps = 4/97 (4%)

Query: 85  SLARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREH 144
           S  RQ Y  E EAA+N  +N+    SY Y +L  +FDRD++AL G+  FF+E +EE+RE 
Sbjct: 1   SQIRQNYSTEVEAAVNRLVNLHLRASYTYLSLGFFFDRDDVALEGVGHFFRELAEEKREG 60

Query: 145 AEKFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALY 181
           AE+ +E+QN RGG+     + +P       E G    
Sbjct: 61  AERLLEFQNDRGGRALFQDVQKPS----QDEWGKTQE 93

>d1euma_ a.25.1.1 (A:) Non-hem ferritin {Escherichia coli, FtnA [TaxId: 562]} Length = 161

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Non-hem ferritin
species: Escherichia coli, FtnA [TaxId: 562]

 Score = 89.6 bits (222), Expect = 2e-23
 Identities = 19/85 (22%), Positives = 41/85 (48%), Gaps = 2/85 (2%)

Query: 92  EDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEY 151
           + E    +NEQ+N+E   S +Y  + A+         G A F +  ++EE  H ++  +Y
Sbjct: 2   KPEMIEKLNEQMNLELYSSLLYQQMSAWCSYHT--FEGAAAFLRRHAQEEMTHMQRLFDY 59

Query: 152 QNLRGGKVKLHSIMQPPSEFDHAEK 176
               G   +++++  P +E+   ++
Sbjct: 60  LTDTGNLPRINTVESPFAEYSSLDE 84

>d1s3qa1 a.25.1.1 (A:3-164) Non-hem ferritin {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 162

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Non-hem ferritin
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 88.9 bits (220), Expect = 5e-23
 Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 7/116 (6%)

Query: 93  DECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQ 152
           ++   A+N QIN E   +Y+Y ++ +YFD  +I L+G + + +   +EE  HA K  ++ 
Sbjct: 4   EKMVEALNRQINAEIYSAYLYLSMASYFD--SIGLKGFSNWMRVQWQEELMHAMKMFDFV 61

Query: 153 NLRGGKVKLHSIMQPPSEFDHAEKGDALYGKFS---GLTAALNHLIYSISRLKSYN 205
           + RGG+VKL+++ +PPSE+D      A    +     +T  ++ L+    + K + 
Sbjct: 62  SERGGRVKLYAVEEPPSEWDSPL--AAFEHVYEHEVNVTKRIHELVEMAMQEKDFA 115

>d1vlga_ a.25.1.1 (A:) Non-hem ferritin {Thermotoga maritima [TaxId: 2336]} Length = 164

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Non-hem ferritin
species: Thermotoga maritima [TaxId: 2336]

 Score = 87.4 bits (216), Expect = 2e-22
 Identities = 31/84 (36%), Positives = 52/84 (61%), Gaps = 2/84 (2%)

Query: 93  DECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQ 152
           ++   A+N+Q+N E   SY+Y ++  YFD +    +G A + K+ ++EE  HA KF EY 
Sbjct: 6   EKVRKALNDQLNREIYSSYLYLSMATYFDAEG--FKGFAHWMKKQAQEELTHAMKFYEYI 63

Query: 153 NLRGGKVKLHSIMQPPSEFDHAEK 176
             RGG+V+L +I +PPS ++  + 
Sbjct: 64  YERGGRVELEAIEKPPSNWNGIKD 87

>d1krqa_ a.25.1.1 (A:) Non-hem ferritin {Campylobacter jejuni [TaxId: 197]} Length = 165

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Non-hem ferritin
species: Campylobacter jejuni [TaxId: 197]

 Score = 85.0 bits (210), Expect = 1e-21
 Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 2/84 (2%)

Query: 93  DECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQ 152
            E    +NEQIN E   + +Y ++ ++   ++  L G   F    + EE +HA+K + Y 
Sbjct: 4   KEVVKLLNEQINKEMYAANLYLSMSSWCYENS--LDGAGAFLFAHASEESDHAKKLITYL 61

Query: 153 NLRGGKVKLHSIMQPPSEFDHAEK 176
           N     V+L  + QP   F     
Sbjct: 62  NETDSHVELQEVKQPEQNFKSLLD 85

>d2htna1 a.25.1.1 (A:1-158) Bacterioferritin (cytochrome b1) {Escherichia coli [TaxId: 562]} Length = 158

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Bacterioferritin (cytochrome b1)
species: Escherichia coli [TaxId: 562]

 Score = 61.6 bits (149), Expect = 8e-13
 Identities = 18/102 (17%), Positives = 32/102 (31%), Gaps = 2/102 (1%)

Query: 94  ECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQN 153
           +    +N+ +  E      Y      F   N  L+ L       S +E +HA++++E   
Sbjct: 6   KVINYLNKLLGNELVAINQYFLHARMFK--NWGLKRLNDVEYHESIDEMKHADRYIERIL 63

Query: 154 LRGGKVKLHSIMQPPSEFDHAEKGDALYGKFSGLTAALNHLI 195
              G   L  + +     D  E   +           L   I
Sbjct: 64  FLEGLPNLQDLGKLNIGEDVEEMLRSDLALELDGAKNLREAI 105

>d1nf4a_ a.25.1.1 (A:) Bacterioferritin (cytochrome b1) {Desulfovibrio desulfuricans [TaxId: 876]} Length = 169

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Bacterioferritin (cytochrome b1)
species: Desulfovibrio desulfuricans [TaxId: 876]

 Score = 55.9 bits (134), Expect = 1e-10
 Identities = 17/117 (14%), Positives = 40/117 (34%), Gaps = 2/117 (1%)

Query: 88  RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEK 147
           R+  + +    +N+   +E +  + Y  +  ++  D++    LA   K  + +E  HAE 
Sbjct: 2   REDRKAKVIEVLNKARAMELHAIHQY--MNQHYSLDDMDYGELAANMKLIAIDEMRHAEN 59

Query: 148 FMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYGKFSGLTAALNHLIYSISRLKSY 204
           F E     GG+       +  +        ++   +      A +  +         
Sbjct: 60  FAERIKELGGEPTTQKEGKVVTGQAVPVIYESDADQEDATIEAYSQFLKVCKEQGDI 116

>d1jgca_ a.25.1.1 (A:) Bacterioferritin (cytochrome b1) {Rhodobacter capsulatus [TaxId: 1061]} Length = 160

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Bacterioferritin (cytochrome b1)
species: Rhodobacter capsulatus [TaxId: 1061]

 Score = 55.5 bits (133), Expect = 1e-10
 Identities = 16/111 (14%), Positives = 30/111 (27%), Gaps = 2/111 (1%)

Query: 94  ECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQN 153
           +    +N  +  E      Y   +   +  +  L  +AK  +E S EE  HA+K +    
Sbjct: 6   KVIEFLNAALRSELTAISQYWVHFRLQE--DWGLAKMAKKSREESIEEMGHADKIIARIL 63

Query: 154 LRGGKVKLHSIMQPPSEFDHAEKGDALYGKFSGLTAALNHLIYSISRLKSY 204
              G   L  +          E  +                    + +   
Sbjct: 64  FLEGHPNLQKLDPLRIGEGPRETLECDLAGEHDALKLYREARDYCAEVGDI 114

>d2fkza1 a.25.1.1 (A:1-154) Bacterioferritin (cytochrome b1) {Azotobacter vinelandii [TaxId: 354]} Length = 154

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Bacterioferritin (cytochrome b1)
species: Azotobacter vinelandii [TaxId: 354]

 Score = 47.4 bits (112), Expect = 1e-07
 Identities = 16/98 (16%), Positives = 30/98 (30%), Gaps = 2/98 (2%)

Query: 98  AINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGG 157
            +N+ +  E      Y      +  ++  L  L K     S +E +HA+K ++      G
Sbjct: 10  HLNKILGNELIAINQYFLHARMY--EDWGLEKLGKHEYHESIDEMKHADKLIKRILFLEG 67

Query: 158 KVKLHSIMQPPSEFDHAEKGDALYGKFSGLTAALNHLI 195
              L  + +        E  +            L   I
Sbjct: 68  LPNLQELGKLLIGEHTKEMLECDLKLEQAGLPDLKAAI 105

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	212
d1rcda_	171	(Apo)ferritin {Bullfrog (Rana catesbeiana) [TaxId:	100.0
d1bg7a_	173	(Apo)ferritin {Bullfrog (Rana catesbeiana) [TaxId:	100.0
d1r03a_	171	(Apo)ferritin {Human (Homo sapiens), mitocondial i	100.0
d1lb3a_	179	(Apo)ferritin {Mouse (Mus musculus) [TaxId: 10090]	100.0
d1krqa_	165	Non-hem ferritin {Campylobacter jejuni [TaxId: 197	99.97
d1z6om1	191	(Apo)ferritin {Cabbage looper(Trichoplusia ni), H	99.97
d1vlga_	164	Non-hem ferritin {Thermotoga maritima [TaxId: 2336	99.97
d1z6oa1	200	(Apo)ferritin {Cabbage looper(Trichoplusia ni), L	99.97
d1euma_	161	Non-hem ferritin {Escherichia coli, FtnA [TaxId: 5	99.97
d1s3qa1	162	Non-hem ferritin {Archaeon Archaeoglobus fulgidus	99.97
d2fkza1	154	Bacterioferritin (cytochrome b1) {Azotobacter vine	99.87
d1jgca_	160	Bacterioferritin (cytochrome b1) {Rhodobacter caps	99.87
d2htna1	158	Bacterioferritin (cytochrome b1) {Escherichia coli	99.86
d1nf4a_	169	Bacterioferritin (cytochrome b1) {Desulfovibrio de	99.84
d1yuza1	135	Nigerythrin, N-terminal domain {Desulfovibrio vulg	99.8
d1j30a_	141	Hypothetical rubrerythrin {Archaeon Sulfolobus tok	99.72
d1lkoa1	146	Rubrerythrin, N-terminal domain {Desulfovibrio vul	99.68
d1nnqa1	133	Rubrerythrin, N-terminal domain {Archaeon Pyrococc	99.22
d1o9ra_	162	Dodecameric ferritin homolog {Agrobacterium tumefa	98.76
d1ji5a_	142	Dodecameric ferritin homolog {Bacillus anthracis,	98.66
d1jiga_	146	Dodecameric ferritin homolog {Bacillus anthracis,	98.65
d1tjoa_	180	Dodecameric ferritin homolog {Archaeon Halobacteri	98.49
d1umna_	151	Dodecameric ferritin homolog {Streptococcus suis [	98.45
d2oh3a1	152	Uncharacterized protein AMB4284 homologue {Magneto	98.45
d1n1qa_	149	Dodecameric ferritin homolog {Bacillus brevis, Dps	98.41
d2fjca1	151	Dodecameric ferritin homolog {Treponema pallidum,	98.38
d1ji4a_	144	Dodecameric ferritin homolog {Helicobacter pylori,	98.17
d1dpsa_	159	Dodecameric ferritin homolog {Escherichia coli, Dp	97.94
d2fzfa1	158	Hypothetical protein PF1190 {Archaeon Pyrococcus f	97.84
d2bk6a1	150	Dodecameric ferritin homolog {Listeria innocua [Ta	97.84
d2ib0a1	142	Hypothetical protein Rv2844 {Mycobacterium tubercu	97.69
d2yw6a1	141	Dodecameric ferritin homolog {Mycobacterium smegma	97.39
d1vjxa_	149	Hypothetical protein TM1526 {Thermotoga maritima [	96.76
d1zs3a1	171	Dodecameric ferritin homolog {Lactococcus lactis,	96.4
d1zpya1	91	Hypothetical protein NE0167 {Nitrosomonas europaea	96.14
d1zuja1	168	Dodecameric ferritin homolog {Lactococcus lactis,	95.28
d1lkoa1	146	Rubrerythrin, N-terminal domain {Desulfovibrio vul	92.93
d1yuza1	135	Nigerythrin, N-terminal domain {Desulfovibrio vulg	92.53
d2fkza1	154	Bacterioferritin (cytochrome b1) {Azotobacter vine	89.4
d1vjxa_	149	Hypothetical protein TM1526 {Thermotoga maritima [	88.45
d2oh3a1	152	Uncharacterized protein AMB4284 homologue {Magneto	87.32
d2fzfa1	158	Hypothetical protein PF1190 {Archaeon Pyrococcus f	85.92
d1nf4a_	169	Bacterioferritin (cytochrome b1) {Desulfovibrio de	84.91
d2htna1	158	Bacterioferritin (cytochrome b1) {Escherichia coli	84.27
d1nnqa1	133	Rubrerythrin, N-terminal domain {Archaeon Pyrococc	82.92
d2itba1	199	Putative tRNA-(Ms(2)io(6)a)-hydroxylase PP2188 {Ps	82.36
d1j30a_	141	Hypothetical rubrerythrin {Archaeon Sulfolobus tok	81.38
d2cwla1	299	Manganese catalase (T-catalase) {Thermus thermophi	81.34

>d1rcda_ a.25.1.1 (A:) (Apo)ferritin {Bullfrog (Rana catesbeiana) [TaxId: 8400]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: (Apo)ferritin
species: Bullfrog (Rana catesbeiana) [TaxId: 8400]

Probab=100.00  E-value=1.4e-34  Score=236.17  Aligned_cols=124  Identities=37%  Similarity=0.627  Sum_probs=116.3

Q ss_pred             chhcccccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccC
Q 028202           85 SLARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSI  164 (212)
Q Consensus        85 s~~Rq~~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I  164 (212)
                      |++||||+++|+++||+|||.|++|||+|++||+||+++++||+|||+||+.+|+|||+||++|++||++|||.|++++|
T Consensus         1 ~~~r~n~~~e~~~aLN~qi~~El~as~~Yl~ma~~f~~~~~~l~g~a~~f~~~s~EE~~Ha~~l~~yi~~rgg~~~~~~i   80 (171)
T d1rcda_           1 SQVRQNFHQDCEAGLNRTVNLKFHSSYVYLSMASYFNRDDVALSNFAKFFRERSEEEKEHAEKLIEYQNQRGGRVFLQSV   80 (171)
T ss_dssp             CTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCC
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeccc
Confidence            68999999999999999999999999999999999999899999999999999999999999999999999999999999


Q ss_pred             CCCC-CcCcccc-ccccHHHHHHHHHHHHHHHHHHHHhcCChhhhh
Q 028202          165 MQPP-SEFDHAE-KGDALYGKFSGLTAALNHLIYSISRLKSYNVIL  208 (212)
Q Consensus       165 ~~P~-~e~~~~e-~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~  208 (212)
                      ++|+ .+|.++. .+.....+|+.++..|++++..|.+.+|+++..
T Consensus        81 ~~~~~~~~~s~~e~~~~al~~Ek~v~~~l~~l~~~a~~~~D~~~~~  126 (171)
T d1rcda_          81 EKPERDDWANGLEALQTALKLQKSVNQALLDLHAVAADKSDPHMTD  126 (171)
T ss_dssp             CCCSCSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred             CCCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence            8877 4777764 477888899999999999999999999999865

>d1bg7a_ a.25.1.1 (A:) (Apo)ferritin {Bullfrog (Rana catesbeiana) [TaxId: 8400]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: (Apo)ferritin
species: Bullfrog (Rana catesbeiana) [TaxId: 8400]

Probab=100.00  E-value=1.4e-34  Score=236.57  Aligned_cols=124  Identities=41%  Similarity=0.575  Sum_probs=104.0

Q ss_pred             chhcccccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccC
Q 028202           85 SLARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSI  164 (212)
Q Consensus        85 s~~Rq~~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I  164 (212)
                      |++||||+++|+++||+|||.|++|||+|++||+||+++++||+|||+||+.+|+|||+||++|++||++|||+|++++|
T Consensus         2 ~~~r~n~~~e~e~aLN~qi~~El~as~~Yl~ma~~f~~~~~~l~g~a~~f~~~s~EE~~HA~~l~~yl~~rgg~~~~~~i   81 (173)
T d1bg7a_           2 SQVRQNFHRDCEAAINRMVNMELYASYTYLSMAFYFDRDDIALHNVAKFFKEQSHEEREHAEKLMKDQNKRGGRIVLQDV   81 (173)
T ss_dssp             CTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCC
T ss_pred             CcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCC
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCC-CcCccccc-cccHHHHHHHHHHHHHHHHHHHHhcCChhhhh
Q 028202          165 MQPP-SEFDHAEK-GDALYGKFSGLTAALNHLIYSISRLKSYNVIL  208 (212)
Q Consensus       165 ~~P~-~e~~~~e~-~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~  208 (212)
                      ++|+ .+|+++.. ++....+|+.++..|++++..|.+.+|+.+..
T Consensus        82 ~~~~~~~~~s~~~~~~~al~~Ek~v~~~l~~l~~~a~~~~D~~~~~  127 (173)
T d1bg7a_          82 QKPERDEWGNTLEAMQAALQLEKTVNQALLDLHKVGSDKVDPHLCD  127 (173)
T ss_dssp             CCCSCSCCCSHHHHHHHHHHHHHHHHHHHHHC--------------
T ss_pred             CCCCCCCCCCHhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence            9876 46777754 77888899999999999999999999998865

>d1r03a_ a.25.1.1 (A:) (Apo)ferritin {Human (Homo sapiens), mitocondial isoform [TaxId: 9606]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: (Apo)ferritin
species: Human (Homo sapiens), mitocondial isoform [TaxId: 9606]

Probab=100.00  E-value=4.3e-34  Score=233.01  Aligned_cols=125  Identities=34%  Similarity=0.520  Sum_probs=116.8

Q ss_pred             chhcccccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccC
Q 028202           85 SLARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSI  164 (212)
Q Consensus        85 s~~Rq~~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I  164 (212)
                      |.+||||+++|+++||+|||.|++|||+|++||.||+++++||+|||+||+.+|+|||+||++|++||++|||+|++++|
T Consensus         1 ~~~r~n~~~e~e~aLN~qi~~El~as~~Yl~ma~~f~~~~~~l~g~a~~f~~~a~EE~~Ha~~l~~yi~~rgg~~~~~~i   80 (171)
T d1r03a_           1 SRVRQNFHPDSEAAINRQINLELYASYVYLSMAYYFSRDDVALNNFSRYFLHQSREETEHAEKLMRLQNQRGGRIRLQDI   80 (171)
T ss_dssp             CTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCC
T ss_pred             CCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCc
Confidence            67999999999999999999999999999999999998899999999999999999999999999999999999999999


Q ss_pred             CCCCC-cCcccc-ccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhh
Q 028202          165 MQPPS-EFDHAE-KGDALYGKFSGLTAALNHLIYSISRLKSYNVILL  209 (212)
Q Consensus       165 ~~P~~-e~~~~e-~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~  209 (212)
                      ++|.. +|+++. .++....+|+.++..|++++..|.+.+|+.+...
T Consensus        81 ~~~~~~~~~s~~~~~~~~l~~E~~vt~~i~~l~~~a~~~~D~~t~~f  127 (171)
T d1r03a_          81 KKPEQDDWESGLHAMECALLLEKNVNQSLLELHALASDKGDPHLCDF  127 (171)
T ss_dssp             CCCSCSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred             cCCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence            99876 466664 4777888999999999999999999999998654

>d1lb3a_ a.25.1.1 (A:) (Apo)ferritin {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: (Apo)ferritin
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1e-33  Score=232.72  Aligned_cols=124  Identities=35%  Similarity=0.544  Sum_probs=116.1

Q ss_pred             chhcccccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccC
Q 028202           85 SLARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSI  164 (212)
Q Consensus        85 s~~Rq~~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I  164 (212)
                      |++||||+++|+++||+|||.||+|||+|++||+||+++++|++|||+||+++|+|||+||++|++||++|||+|++++|
T Consensus         1 ~~~r~n~~~e~e~aLN~qi~~El~as~~Yl~ma~~~~~~~~~l~g~a~~f~~~s~EE~~HA~~l~~yi~~rgg~~~~~~i   80 (179)
T d1lb3a_           1 SQIRQNYSTEVEAAVNRLVNLHLRASYTYLSLGFFFDRDDVALEGVGHFFRELAEEKREGAERLLEFQNDRGGRALFQDV   80 (179)
T ss_dssp             CTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCC
T ss_pred             CCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeecCC
Confidence            78999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCC-cCccccc-cccHHHHHHHHHHHHHHHHHHHHhcCChhhhh
Q 028202          165 MQPPS-EFDHAEK-GDALYGKFSGLTAALNHLIYSISRLKSYNVIL  208 (212)
Q Consensus       165 ~~P~~-e~~~~e~-~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~  208 (212)
                      ++|+. +|+++.. ++....+|+.++..|++++..|.+.+|+++..
T Consensus        81 ~~~~~~~~~~~~~~~~~aL~~Ek~v~~~l~~l~~~A~~~~D~~t~~  126 (179)
T d1lb3a_          81 QKPSQDEWGKTQEAMEAALAMEKNLNQALLDLHALGSARADPHLCD  126 (179)
T ss_dssp             CCCSCSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred             CCCCCcccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHH
Confidence            98774 5777643 77788889999999999999999999999965

>d1krqa_ a.25.1.1 (A:) Non-hem ferritin {Campylobacter jejuni [TaxId: 197]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Non-hem ferritin
species: Campylobacter jejuni [TaxId: 197]

Probab=99.97  E-value=4.3e-31  Score=213.98  Aligned_cols=118  Identities=25%  Similarity=0.366  Sum_probs=110.9

Q ss_pred             cccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccCCCCCC
Q 028202           90 KYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPS  169 (212)
Q Consensus        90 ~~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I~~P~~  169 (212)
                      +++++|+++||+|||.|++|||+|++||+||++  ++++|||+||+.+|+|||+||++|++||++|||.|++++|++|..
T Consensus         1 M~s~~v~~~LN~qi~~El~as~~Yl~~a~~~~~--~~l~g~a~~f~~~s~EE~~HA~~l~~yi~~rgg~~~~~~i~~p~~   78 (165)
T d1krqa_           1 MLSKEVVKLLNEQINKEMYAANLYLSMSSWCYE--NSLDGAGAFLFAHASEESDHAKKLITYLNETDSHVELQEVKQPEQ   78 (165)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCCCCCCC
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--cchhHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCCccCccccccc
Confidence            578999999999999999999999999999994  599999999999999999999999999999999999999999999


Q ss_pred             cCccccc-cccHHHHHHHHHHHHHHHHHHHHhcCChhhhhh
Q 028202          170 EFDHAEK-GDALYGKFSGLTAALNHLIYSISRLKSYNVILL  209 (212)
Q Consensus       170 e~~~~e~-~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~  209 (212)
                      +|+++.. +.....+|+.++..|++++..|.+.+|+++...
T Consensus        79 ~~~~~~~~l~~al~~E~~v~~~~~~l~~~A~~~~D~~t~~f  119 (165)
T d1krqa_          79 NFKSLLDVFEKTYEHEQFITKSINTLVEHMLTHKDYSTFNF  119 (165)
T ss_dssp             CCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHH
Confidence            9988754 788889999999999999999999999998654

>d1z6om1 a.25.1.1 (M:1-191) (Apo)ferritin {Cabbage looper(Trichoplusia ni), H chain [TaxId: 7111]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: (Apo)ferritin
species: Cabbage looper(Trichoplusia ni), H chain [TaxId: 7111]

Probab=99.97  E-value=6.3e-31  Score=219.09  Aligned_cols=124  Identities=24%  Similarity=0.339  Sum_probs=108.8

Q ss_pred             chhcccccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeee----
Q 028202           85 SLARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVK----  160 (212)
Q Consensus        85 s~~Rq~~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~----  160 (212)
                      ++-..+++++|+++||+|||.|+.|||+|++||+||++++++||||++||+++|+|||+||+||++||++|||++.    
T Consensus        11 ~~~~~~~~~~~e~aLn~qIn~El~aSy~Yl~ma~~f~~~~~~l~Gfa~ff~~~s~EE~eHa~kl~~Yl~~RGg~v~~~~~   90 (191)
T d1z6om1          11 PKDWITMHRSCRNSMRQQIQMEVGASLQYLAMGAHFSKDVVNRPGFAQLFFDAASEEREHAMKLIEYLLMRGELTNDVSS   90 (191)
T ss_dssp             CCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSCCGG
T ss_pred             CcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCcchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccc
Confidence            3444468899999999999999999999999999999999999999999999999999999999999999999864    


Q ss_pred             -eccCCCCCCcCccccc-cccHHHHHHHHHHHHHHHHHHHHhcCChhhhh
Q 028202          161 -LHSIMQPPSEFDHAEK-GDALYGKFSGLTAALNHLIYSISRLKSYNVIL  208 (212)
Q Consensus       161 -l~~I~~P~~e~~~~e~-~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~  208 (212)
                       ++.+++|..+|+++.. +...+.+|+.++..|+++...|.+.+||.+-.
T Consensus        91 ~~~~~~~~~~~~~s~l~a~~~AL~~Ek~vt~~i~~L~~~A~~~~d~~d~~  140 (191)
T d1z6om1          91 LLQVRPPTRSSWKGGVEALEHALSMESDVTKSIRNVIKACEDDSEFNDYH  140 (191)
T ss_dssp             GCCCCCCSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCHH
T ss_pred             ccCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCHH
Confidence             4445666678888754 67778888999999999999999999887643

>d1vlga_ a.25.1.1 (A:) Non-hem ferritin {Thermotoga maritima [TaxId: 2336]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Non-hem ferritin
species: Thermotoga maritima [TaxId: 2336]

Probab=99.97  E-value=9.2e-31  Score=211.39  Aligned_cols=118  Identities=30%  Similarity=0.488  Sum_probs=110.5

Q ss_pred             cccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccCCCCCC
Q 028202           90 KYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPS  169 (212)
Q Consensus        90 ~~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I~~P~~  169 (212)
                      +++++|+++||+|||.|++|||+|++||+||+  ++||+|||+||+.+|+|||+||++|++|+++|||+|.+++|++|..
T Consensus         3 ~~s~~v~~~LN~qi~~El~as~~Yl~ma~~~~--~~~l~g~a~~f~~~s~EE~~HA~~l~~yi~~rgg~~~~~~i~~p~~   80 (164)
T d1vlga_           3 VISEKVRKALNDQLNREIYSSYLYLSMATYFD--AEGFKGFAHWMKKQAQEELTHAMKFYEYIYERGGRVELEAIEKPPS   80 (164)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCC
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hcchhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCCCCCCCC
Confidence            58999999999999999999999999999998  6899999999999999999999999999999999999999999999


Q ss_pred             cCccccc-cccHHHHHHHHHHHHHHHHHHHHhcCChhhhhh
Q 028202          170 EFDHAEK-GDALYGKFSGLTAALNHLIYSISRLKSYNVILL  209 (212)
Q Consensus       170 e~~~~e~-~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~  209 (212)
                      +|.++.. +.....+|..++..|++++..|.+.+|+++...
T Consensus        81 ~~~~~~~~~~~al~~E~~v~~~~~~l~~~a~~~~D~~t~~f  121 (164)
T d1vlga_          81 NWNGIKDAFEAALKHEEFVTQSIYNILELASEEKDHATVSF  121 (164)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHH
Confidence            9887754 777888888888999999999999999998654

>d1z6oa1 a.25.1.1 (A:13-212) (Apo)ferritin {Cabbage looper(Trichoplusia ni), L chain [TaxId: 7111]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: (Apo)ferritin
species: Cabbage looper(Trichoplusia ni), L chain [TaxId: 7111]

Probab=99.97  E-value=1e-30  Score=219.08  Aligned_cols=124  Identities=15%  Similarity=0.175  Sum_probs=105.3

Q ss_pred             cchhcccccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeecc
Q 028202           84 LSLARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHS  163 (212)
Q Consensus        84 ~s~~Rq~~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~  163 (212)
                      .+..|.++++.|+.+||+|||+||.+||+|++||+||++++++||||++||+++|+|||+||+||++||++|||+|.++.
T Consensus        14 ~~~~~~~~~~~~e~~ln~~in~el~aSy~Ylama~~f~~~~~~l~GfakfF~~~S~EE~eHA~kl~~Yl~~RGg~v~~~~   93 (200)
T d1z6oa1          14 AVYGEYGSHGNVATELQAYAKLHLERSYDYLLSAAYFNNYQTNRAGFSKLFKKLSDEAWSKTIDIIKHVTKRGDKMNFDQ   93 (200)
T ss_dssp             SCCTTTTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCTTC
T ss_pred             hhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCceecCc
Confidence            34668888999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCcCcccc-ccccHHH------HHHHHHHHHHHHHHHHHhcC----Chhhh
Q 028202          164 IMQPPSEFDHAE-KGDALYG------KFSGLTAALNHLIYSISRLK----SYNVI  207 (212)
Q Consensus       164 I~~P~~e~~~~e-~~d~l~a------~E~aLt~~Ine~i~~~~~~k----D~~~~  207 (212)
                      |++|+.+++... +.+.+.+      +|+.++..|+++...|.+.+    |+.+.
T Consensus        94 i~~p~~~~~~~~~~~~~l~~~~~AL~~Ek~Vt~~i~~L~~~A~~~~~~~~D~~~~  148 (200)
T d1z6oa1          94 HSTMKTERKNYTAENHELEALAKALDTQKELAERAFYIHREATRNSQHLHDPEIA  148 (200)
T ss_dssp             CCCSCCCCCCCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTCCCHHHH
T ss_pred             ccCCCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCHHHH
Confidence            999988775442 3455554      55555557777777777764    55543

>d1euma_ a.25.1.1 (A:) Non-hem ferritin {Escherichia coli, FtnA [TaxId: 562]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Non-hem ferritin
species: Escherichia coli, FtnA [TaxId: 562]

Probab=99.97  E-value=1.7e-30  Score=209.25  Aligned_cols=118  Identities=20%  Similarity=0.366  Sum_probs=110.8

Q ss_pred             ccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccCCCCCCc
Q 028202           91 YEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPSE  170 (212)
Q Consensus        91 ~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I~~P~~e  170 (212)
                      ++++|+++||+|||.|++|||+|++||+||++  +||+|||+||+.+|+|||+||++|++||++|||.|.+++|++|..+
T Consensus         1 l~~~~~~~LN~qi~~El~as~~Yl~~a~~~~~--~~l~g~a~~f~~~a~EE~~HA~~l~~yl~~rgg~~~~~~i~~p~~~   78 (161)
T d1euma_           1 LKPEMIEKLNEQMNLELYSSLLYQQMSAWCSY--HTFEGAAAFLRRHAQEEMTHMQRLFDYLTDTGNLPRINTVESPFAE   78 (161)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCCcc
Confidence            58999999999999999999999999999994  5999999999999999999999999999999999999999999999


Q ss_pred             Cccccc-cccHHHHHHHHHHHHHHHHHHHHhcCChhhhhhh
Q 028202          171 FDHAEK-GDALYGKFSGLTAALNHLIYSISRLKSYNVILLV  210 (212)
Q Consensus       171 ~~~~e~-~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~~  210 (212)
                      |.++.. +.....+|..++..|++++..|.+.+|+++...+
T Consensus        79 ~~~~~~~~~~al~~E~~v~~~~~~l~~~A~~~~D~~t~~fl  119 (161)
T d1euma_          79 YSSLDELFQETYKHEQLITQKINELAHAAMTNQDYPTFNFL  119 (161)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHH
Confidence            998854 7888899999999999999999999999987653

>d1s3qa1 a.25.1.1 (A:3-164) Non-hem ferritin {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Non-hem ferritin
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.97  E-value=2.1e-30  Score=208.58  Aligned_cols=117  Identities=29%  Similarity=0.520  Sum_probs=110.5

Q ss_pred             ccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccCCCCCCc
Q 028202           91 YEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPSE  170 (212)
Q Consensus        91 ~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I~~P~~e  170 (212)
                      ++++++++||+|||.|++|||+|++||.||+  +++|+|||+||+.+|+|||+||++|++||++|||.|.+++|++|..+
T Consensus         2 ~s~~~~~~Ln~qi~~El~as~~Yl~~a~~~~--~~~l~g~a~~f~~~s~eE~~Ha~~l~~yl~~rgg~~~~~~i~~p~~~   79 (162)
T d1s3qa1           2 ISEKMVEALNRQINAEIYSAYLYLSMASYFD--SIGLKGFSNWMRVQWQEELMHAMKMFDFVSERGGRVKLYAVEEPPSE   79 (162)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCCC
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCCCcc
Confidence            6899999999999999999999999999997  78999999999999999999999999999999999999999999999


Q ss_pred             Cccccc-cccHHHHHHHHHHHHHHHHHHHHhcCChhhhhh
Q 028202          171 FDHAEK-GDALYGKFSGLTAALNHLIYSISRLKSYNVILL  209 (212)
Q Consensus       171 ~~~~e~-~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~  209 (212)
                      |+++.. +.....+|..++..|++++..|.+.+|+++..+
T Consensus        80 ~~~~~~~l~~~l~~E~~v~~~l~~l~~~a~~~~D~~t~~f  119 (162)
T d1s3qa1          80 WDSPLAAFEHVYEHEVNVTKRIHELVEMAMQEKDFATYNF  119 (162)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHhHHHH
Confidence            988754 777888999999999999999999999998654

>d2fkza1 a.25.1.1 (A:1-154) Bacterioferritin (cytochrome b1) {Azotobacter vinelandii [TaxId: 354]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Bacterioferritin (cytochrome b1)
species: Azotobacter vinelandii [TaxId: 354]

Probab=99.87  E-value=5.2e-22  Score=156.32  Aligned_cols=117  Identities=17%  Similarity=0.096  Sum_probs=106.1

Q ss_pred             cccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccCCCCCC
Q 028202           90 KYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPS  169 (212)
Q Consensus        90 ~~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I~~P~~  169 (212)
                      +.+++++++||++|+.|++|+++|+.+|.||+  ++|++++++||+.+|.||++||.+|.+|++++||.|.+.++.+|..
T Consensus         2 ~~~~~ii~~Ln~~l~~E~~A~~~Y~~~a~~~~--~~~~~~la~~f~~~a~eE~~Ha~~l~~~i~~lGg~p~~~~~~~~~~   79 (154)
T d2fkza1           2 KGDKIVIQHLNKILGNELIAINQYFLHARMYE--DWGLEKLGKHEYHESIDEMKHADKLIKRILFLEGLPNLQELGKLLI   79 (154)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCCC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HcChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccccccccc
Confidence            36799999999999999999999999999999  7799999999999999999999999999999999999999986654


Q ss_pred             cCccc-cccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhh
Q 028202          170 EFDHA-EKGDALYGKFSGLTAALNHLIYSISRLKSYNVILL  209 (212)
Q Consensus       170 e~~~~-e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~  209 (212)
                       ++++ +.+.....+|..+...+++++..|.+.+|+.+..+
T Consensus        80 -~~~~~e~l~~~l~~E~~~~~~y~~~~~~a~~~~D~~t~~~  119 (154)
T d2fkza1          80 -GEHTKEMLECDLKLEQAGLPDLKAAIAYCESVGDYASREL  119 (154)
T ss_dssp             -CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred             -CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence             4444 44777888899888999999999999999998665

>d1jgca_ a.25.1.1 (A:) Bacterioferritin (cytochrome b1) {Rhodobacter capsulatus [TaxId: 1061]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Bacterioferritin (cytochrome b1)
species: Rhodobacter capsulatus [TaxId: 1061]

Probab=99.87  E-value=6.2e-22  Score=157.70  Aligned_cols=118  Identities=14%  Similarity=0.063  Sum_probs=106.6

Q ss_pred             cccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccCCCCCC
Q 028202           90 KYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPS  169 (212)
Q Consensus        90 ~~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I~~P~~  169 (212)
                      +.+++++++||+||+.|+.|+++|+.++.||+  +++++|+++||++++.||++||.+|++|++.+||.|.+..+.+|..
T Consensus         2 ~~~~kvi~~LN~~l~~E~~a~~~Y~~~a~~~~--~~~~~~l~~~f~~~a~eE~~Ha~~l~eri~~lGg~p~~~~~~~~~~   79 (160)
T d1jgca_           2 KGDAKVIEFLNAALRSELTAISQYWVHFRLQE--DWGLAKMAKKSREESIEEMGHADKIIARILFLEGHPNLQKLDPLRI   79 (160)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCCC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcccccccccC
Confidence            46799999999999999999999999999998  7799999999999999999999999999999999999999887654


Q ss_pred             cCccc-cccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhhh
Q 028202          170 EFDHA-EKGDALYGKFSGLTAALNHLIYSISRLKSYNVILLV  210 (212)
Q Consensus       170 e~~~~-e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~~  210 (212)
                       +.++ +.+.....+|..+...|++++..|.+.+|+.|..++
T Consensus        80 -~~~~~e~l~~~l~~E~~~~~~~~~~~~~a~~~~D~~t~~~l  120 (160)
T d1jgca_          80 -GEGPRETLECDLAGEHDALKLYREARDYCAEVGDIVSKNIF  120 (160)
T ss_dssp             -CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred             -cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHH
Confidence             4555 447778888999999999999999999999987553

>d2htna1 a.25.1.1 (A:1-158) Bacterioferritin (cytochrome b1) {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Bacterioferritin (cytochrome b1)
species: Escherichia coli [TaxId: 562]

Probab=99.86  E-value=1.8e-21  Score=153.82  Aligned_cols=118  Identities=17%  Similarity=0.091  Sum_probs=106.6

Q ss_pred             cccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccCCCCCC
Q 028202           90 KYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPS  169 (212)
Q Consensus        90 ~~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I~~P~~  169 (212)
                      +.+++++++||++|+.|++|+++|+.|+.||+  +++++++++||+.++.||++||++|.+||+.+||.|.+.+++.|..
T Consensus         2 ~~~~~ii~~Ln~~l~~E~~A~~~Y~~~a~~~~--~~~~~~la~~f~~~a~eE~~Ha~~l~eri~~lGg~p~~~~~~~~~~   79 (158)
T d2htna1           2 KGDTKVINYLNKLLGNELVAINQYFLHARMFK--NWGLKRLNDVEYHESIDEMKHADRYIERILFLEGLPNLQDLGKLNI   79 (158)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCCC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccC
Confidence            46799999999999999999999999999999  7799999999999999999999999999999999999999998765


Q ss_pred             cCccccccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhh
Q 028202          170 EFDHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILL  209 (212)
Q Consensus       170 e~~~~e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~  209 (212)
                      ..+..+.+.....+|..+...+++++..|.+.+|+.+..+
T Consensus        80 ~~~~~~~l~~~~~~e~~~~~~~~~~~~~a~~~~D~~t~~~  119 (158)
T d2htna1          80 GEDVEEMLRSDLALELDGAKNLREAIGYADSVHDYVSRDM  119 (158)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence            3333345777888888888999999999999999998654

>d1nf4a_ a.25.1.1 (A:) Bacterioferritin (cytochrome b1) {Desulfovibrio desulfuricans [TaxId: 876]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Bacterioferritin (cytochrome b1)
species: Desulfovibrio desulfuricans [TaxId: 876]

Probab=99.84  E-value=9.1e-21  Score=151.87  Aligned_cols=120  Identities=15%  Similarity=0.080  Sum_probs=109.0

Q ss_pred             cccccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccCCCC
Q 028202           88 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQP  167 (212)
Q Consensus        88 Rq~~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I~~P  167 (212)
                      |++-.+++++.||++++.|+.++++|+.++.+|+  +++++|+++||+++|.||++||++|++|++.+||.|.+..+..|
T Consensus         2 ~~~~~~~ii~~Ln~~l~~E~~a~~~Y~~~a~~~~--~~~~~~l~~~f~~~a~eE~~Ha~~l~eri~~lGg~p~~~~~~~~   79 (169)
T d1nf4a_           2 REDRKAKVIEVLNKARAMELHAIHQYMNQHYSLD--DMDYGELAANMKLIAIDEMRHAENFAERIKELGGEPTTQKEGKV   79 (169)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSSCC
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCcccccccc
Confidence            5566789999999999999999999999999998  78999999999999999999999999999999999999999988


Q ss_pred             CCcCccccccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhh
Q 028202          168 PSEFDHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILL  209 (212)
Q Consensus       168 ~~e~~~~e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~  209 (212)
                      ....+..+.+......|..+...|++++..|.+.+|++|..+
T Consensus        80 ~~~~~~~e~l~~~l~~E~~~~~~y~~~~~~A~~~~D~~t~~~  121 (169)
T d1nf4a_          80 VTGQAVPVIYESDADQEDATIEAYSQFLKVCKEQGDIVTARL  121 (169)
T ss_dssp             CCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence            765554456677788888888999999999999999998765

>d1yuza1 a.25.1.1 (A:23-157) Nigerythrin, N-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Nigerythrin, N-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=99.80  E-value=6.2e-20  Score=141.80  Aligned_cols=114  Identities=10%  Similarity=0.030  Sum_probs=98.5

Q ss_pred             HHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccCCCCCCcCcc
Q 028202           94 ECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPSEFDH  173 (212)
Q Consensus        94 eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I~~P~~e~~~  173 (212)
                      +.++.||++++.|+.|+++|+.+|.+|+  ++|++++|++|+.+|.||++||++|++|++++||.|.++.+..|....+.
T Consensus         6 ~t~e~L~~a~~~E~~A~~~Yl~~A~~~~--~~g~~~ia~~f~~~A~eE~~HA~~l~~~l~~lgg~p~~~~~~~~~~~~~~   83 (135)
T d1yuza1           6 STLENLKAAIAGETGAHAKYTAFAKAAR--EQGYEQIARLFEATAAAELIHIGLEYALVAEMEPGYEKPTVAAPSAYSCD   83 (135)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCCCC--CCCCCHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHh--HCCChHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccCcCCchh
Confidence            4678899999999999999999999999  67999999999999999999999999999999999999999888764433


Q ss_pred             ccccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhh
Q 028202          174 AEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILL  209 (212)
Q Consensus       174 ~e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~  209 (212)
                      ..........|...+..|++++..|.+++|+.+..+
T Consensus        84 ~~L~~~~~~ee~e~~~~Y~~~~~~A~~~~d~~~~~~  119 (135)
T d1yuza1          84 LNLISGANGEIYETSDMYPAFIRKAQEEGNSKAVHV  119 (135)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence            333566666677777889999999999999988654

>d1j30a_ a.25.1.1 (A:) Hypothetical rubrerythrin {Archaeon Sulfolobus tokodaii [TaxId: 111955]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Hypothetical rubrerythrin
species: Archaeon Sulfolobus tokodaii [TaxId: 111955]

Probab=99.72  E-value=8.9e-18  Score=129.96  Aligned_cols=112  Identities=12%  Similarity=0.012  Sum_probs=93.7

Q ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccCCCCCCcCc
Q 028202           93 DECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPSEFD  172 (212)
Q Consensus        93 ~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I~~P~~e~~  172 (212)
                      +++++.||++++.|++|+++|+.||.||+  ++|++++|++|+.+|.+|+.||++|++|++.+||.|...+.+.|..   
T Consensus         5 t~t~~~L~~a~~~E~~A~~~Y~~~a~~a~--~~g~~~iA~~f~~~A~eE~~HA~~~~~~i~~lg~~p~~~~~~~~~~---   79 (141)
T d1j30a_           5 TKTAENLKQGFIGESMANRRYLYFAKRAD--EEGYPEIAGLLRSIAEGETAHAFGHLDFIRQGGLTDPATDKPIGTL---   79 (141)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCBCTTTSCBCSSH---
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCcCcCch---
Confidence            46889999999999999999999999999  6699999999999999999999999999999999987665444432   


Q ss_pred             cccc-cccHHHHHHHHHHHHHHHHHHHHhcCChhhhhhh
Q 028202          173 HAEK-GDALYGKFSGLTAALNHLIYSISRLKSYNVILLV  210 (212)
Q Consensus       173 ~~e~-~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~~  210 (212)
                       .+. ...+...+...+..|++.+..|.+++|+.+..++
T Consensus        80 -~~~l~~~~~~e~~e~~~~y~~~~~~A~~e~d~~~~~~~  117 (141)
T d1j30a_          80 -EQMIESAIAGETYEWTQMYPGFAKVAREEGFPEVAEWF  117 (141)
T ss_dssp             -HHHHHHHHHHHHHHHHTHHHHHHHHHHHTTCHHHHHHH
T ss_pred             -hhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence             221 2334444556777899999999999999987653

>d1lkoa1 a.25.1.1 (A:2-147) Rubrerythrin, N-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Rubrerythrin, N-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=99.68  E-value=8.9e-17  Score=125.29  Aligned_cols=113  Identities=12%  Similarity=0.105  Sum_probs=96.6

Q ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccCCCCCCcCc
Q 028202           93 DECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPSEFD  172 (212)
Q Consensus        93 ~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I~~P~~e~~  172 (212)
                      +++++.||..+..|+.|+++|+.+|.||+  ++|+++++++|+.+|.||+.||++|++|++++||.|...  ..|...++
T Consensus         6 t~t~~~L~~a~~~E~~A~~~Y~~~A~~a~--~~g~~~ia~~f~~~A~eE~~HA~~l~~~l~~lg~~p~~~--~~~~~~~~   81 (146)
T d1lkoa1           6 SRTEKNILTAFAGESQARNRYNYFGGQAK--KDGFVQISDIFAETADQEREHAKRLFKFLEGGDLEIVAA--FPAGIIAD   81 (146)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHCCSSCCCCCCC--CCCCCCCC
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCcHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCcCCC--CCccccCC
Confidence            56889999999999999999999999999  679999999999999999999999999999999998654  34444454


Q ss_pred             cccc-cccHHHHHHHHHHHHHHHHHHHHhcCChhhhhh
Q 028202          173 HAEK-GDALYGKFSGLTAALNHLIYSISRLKSYNVILL  209 (212)
Q Consensus       173 ~~e~-~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~  209 (212)
                      +... .......|...+..|++.+..|.+.+|+++..+
T Consensus        82 ~~~~l~~~~~~~e~e~~~~y~~~~~~a~~~~D~~~~~~  119 (146)
T d1lkoa1          82 THANLIASAAGEHHEYTEMYPSFARIAREEGYEEIARV  119 (146)
T ss_dssp             HHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
Confidence            4433 555666677777799999999999999988754

>d1nnqa1 a.25.1.1 (A:2-134) Rubrerythrin, N-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Rubrerythrin, N-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=99.22  E-value=2.8e-11  Score=93.72  Aligned_cols=101  Identities=12%  Similarity=0.038  Sum_probs=83.7

Q ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccCCCCCCcCc
Q 028202           93 DECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQPPSEFD  172 (212)
Q Consensus        93 ~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I~~P~~e~~  172 (212)
                      +..++.||+.+..|++|..+|+.+|..++  +||++.+|+.|+..|.+|+.||+++++++...|+.+             
T Consensus         5 ~~t~~~L~~A~~gE~~A~~~Y~~~A~~a~--~~G~~~lA~~f~~~A~eE~~HA~~~~~~i~~l~~~~-------------   69 (133)
T d1nnqa1           5 TMTKKFLEEAFAGESMAHMRYLIFAEKAE--QEGFPNIAKLFRAIAYAEFVHAKNHFIALGKLGKTP-------------   69 (133)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHH-------------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHH-------------
Confidence            46788999999999999999999999999  789999999999999999999999999987655432             


Q ss_pred             cccc-cccHHHHHHHHHHHHHHHHHHHHhcCChhhhhhh
Q 028202          173 HAEK-GDALYGKFSGLTAALNHLIYSISRLKSYNVILLV  210 (212)
Q Consensus       173 ~~e~-~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~~  210 (212)
                        +. ...+..-+...+..|.+.+..|.+++|.++..++
T Consensus        70 --~~L~~~~~~e~~e~~~~Y~e~~~~a~~egd~~~a~~f  106 (133)
T d1nnqa1          70 --ENLQMGIEGETFEVEEMYPVYNKAAEFQGEKEAVRTT  106 (133)
T ss_dssp             --HHHHHHHHHHHHHHHTHHHHHHHHHHHTTCHHHHHHH
T ss_pred             --hhhHHHHHHhHHHHHHHHHHHHHHHHHCCCHHHHHHH
Confidence              21 1223333355666899999999999999987654

>d1o9ra_ a.25.1.1 (A:) Dodecameric ferritin homolog {Agrobacterium tumefaciens, Dps [TaxId: 358]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Dodecameric ferritin homolog
species: Agrobacterium tumefaciens, Dps [TaxId: 358]

Probab=98.76  E-value=8e-08  Score=75.39  Aligned_cols=119  Identities=10%  Similarity=0.126  Sum_probs=97.0

Q ss_pred             cccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeee--------e
Q 028202           90 KYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVK--------L  161 (212)
Q Consensus        90 ~~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~--------l  161 (212)
                      +-..++.+.||+.+..++....+|....-+..  +.++..+..+|.++++++++|++.+.+++...||.|.        +
T Consensus        13 ~~~~~~~~~Ln~~La~~~~l~~k~~~~HWnv~--G~~F~~lH~~~~~~~~~~~~~~D~iAERi~~LG~~p~~~~~~~~~~   90 (162)
T d1o9ra_          13 NAKSTVIGILNESLASVIDLALVTKQAHWNLK--GPQFIAVHELLDTFRTQLDNHGDTIAERVVQLGGTALGSLQAVSST   90 (162)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCB--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhhhcee--CCChHHHHHhHHHHHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHHh
Confidence            45567889999999998888888776665555  5589999999999999999999999999999999994        5


Q ss_pred             ccCCCCCCcCccc-cccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhhh
Q 028202          162 HSIMQPPSEFDHA-EKGDALYGKFSGLTAALNHLIYSISRLKSYNVILLV  210 (212)
Q Consensus       162 ~~I~~P~~e~~~~-e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~~  210 (212)
                      ..|+.++.++.+. +.+..+...+..+...+++++..|.+.+|++|.-++
T Consensus        91 s~i~~~~~~~~~~~e~l~~~l~~~~~~~~~~~~~i~~a~~~~D~~T~dll  140 (162)
T d1o9ra_          91 TKLKAYPTDIYKIHDHLDALIERYGEVANMIRKAIDDSDEAGDPTTADIF  140 (162)
T ss_dssp             CCSCCCCSSCCBHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred             ccCcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
Confidence            5677776655443 446666667777778999999999999999987653

>d1ji5a_ a.25.1.1 (A:) Dodecameric ferritin homolog {Bacillus anthracis, Dlp-1 [TaxId: 1392]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Dodecameric ferritin homolog
species: Bacillus anthracis, Dlp-1 [TaxId: 1392]

Probab=98.66  E-value=1.5e-07  Score=72.08  Aligned_cols=115  Identities=16%  Similarity=0.098  Sum_probs=94.3

Q ss_pred             HHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCee--------eeccCC
Q 028202           94 ECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKV--------KLHSIM  165 (212)
Q Consensus        94 eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V--------~l~~I~  165 (212)
                      ++.+.||+++........+|....-...  +.++..+..+|.+++++.++|+..+.+++...||.|        ....++
T Consensus         1 ~~~e~Ln~~lA~~~~l~~k~~~~HWnv~--G~~F~~~H~~~~e~y~~~~~~~D~lAERi~~Lgg~p~~~~~~~~~~s~i~   78 (142)
T d1ji5a_           1 QVIEVLNKQVADWSVLFTKLHNFHWYVK--GPQFFTLHEKFEELYTESATHIDEIAERILAIGGKPVATMKEYLEISSIQ   78 (142)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHCCCC
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHhhcccc--CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCcCHHHHHhhCcCc
Confidence            3678999999999888888887754445  558999999999999999999999999999999999        466677


Q ss_pred             CCCCcCccccccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhhh
Q 028202          166 QPPSEFDHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILLV  210 (212)
Q Consensus       166 ~P~~e~~~~e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~~  210 (212)
                      .++..++..+....+...+..+...+++++..|.+.+|++|.-+.
T Consensus        79 e~~~~~~~~~ml~~~~~~~~~~~~~~~~~~~~a~~~~D~~t~~ll  123 (142)
T d1ji5a_          79 EAAYGETAEGMVEAIMKDYEMMLVELKKGMEIAQNSDDEMTSDLL  123 (142)
T ss_dssp             CCCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred             ccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
Confidence            666666544445556666777778999999999999999987653

>d1jiga_ a.25.1.1 (A:) Dodecameric ferritin homolog {Bacillus anthracis, Dlp-2 [TaxId: 1392]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Dodecameric ferritin homolog
species: Bacillus anthracis, Dlp-2 [TaxId: 1392]

Probab=98.65  E-value=2.9e-07  Score=70.57  Aligned_cols=117  Identities=15%  Similarity=0.078  Sum_probs=93.8

Q ss_pred             cHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeee--------cc
Q 028202           92 EDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKL--------HS  163 (212)
Q Consensus        92 s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l--------~~  163 (212)
                      ..++.+.||..+...+....+|....-...  +-++..+..+|.+++++.++|+..+.+++...||.|..        ..
T Consensus         3 ~~~~~~~Ln~~lA~~~~l~~k~~~~HWnv~--G~~F~~lH~~~~e~~~~~~~~~D~iAERi~~lgg~p~~~~~~~~~~s~   80 (146)
T d1jiga_           3 KTNVVEVLNKQVANWNVLYVKLHNYHWYVT--GPHFFTLHEKFEEFYNEAGTYIDELAERILALEGKPLATMKEYLATSS   80 (146)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhhee--CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCccCHHHHhhcCc
Confidence            357899999999999998888887765566  45799999999999999999999999999999999853        34


Q ss_pred             CCCCCCcCccccccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhhh
Q 028202          164 IMQPPSEFDHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILLV  210 (212)
Q Consensus       164 I~~P~~e~~~~e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~~  210 (212)
                      ++.+....+..+....+..-+..+...+++.+..|.+.+|++|..+.
T Consensus        81 i~e~~~~~~~~~~l~~ll~~~~~~~~~~r~~i~~a~~~~D~~t~dll  127 (146)
T d1jiga_          81 VNEGTSKESAEEMVQTLVNDYSALIQELKEGMEVAGEAGDATSADML  127 (146)
T ss_dssp             SCCCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred             CccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHhHHHHH
Confidence            55554444433445555556666677999999999999999997653

>d1tjoa_ a.25.1.1 (A:) Dodecameric ferritin homolog {Archaeon Halobacterium salinarum [TaxId: 2242]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Dodecameric ferritin homolog
species: Archaeon Halobacterium salinarum [TaxId: 2242]

Probab=98.49  E-value=1.1e-06  Score=69.96  Aligned_cols=118  Identities=14%  Similarity=0.142  Sum_probs=94.2

Q ss_pred             ccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeee--------c
Q 028202           91 YEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKL--------H  162 (212)
Q Consensus        91 ~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l--------~  162 (212)
                      -.+++++.||..+..++....+|....-...  +.++..+..+|.+++++..+|+..+.+++...||.|..        .
T Consensus        25 ~~~~~i~~Ln~~LA~~~~l~~k~~~~HWnv~--G~~F~~lH~~fee~y~~~~~~~D~iAERI~~LGg~p~~~~~~~~~~s  102 (180)
T d1tjoa_          25 RAEQCVDALNADLANVYVLYHQLKKHHWNVE--GAEFRDLHLFLGEAAETAEEVADELAERVQALGGVPHASPETLQAEA  102 (180)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhheeee--CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCcCHHHHHHHc
Confidence            4558899999999999998888887776666  55899999999999999999999999999999999843        4


Q ss_pred             cCCCCCCcCcc-ccccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhhh
Q 028202          163 SIMQPPSEFDH-AEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILLV  210 (212)
Q Consensus       163 ~I~~P~~e~~~-~e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~~  210 (212)
                      .++.++.+..+ .++...+...+..+...+++++..|.+.+|++|.-+.
T Consensus       103 ~i~e~~~~~~~~~eml~~ll~~~~~~i~~~~~~i~~a~e~~D~~Tadll  151 (180)
T d1tjoa_         103 SVDVEDEDVYDIRTSLANDMAIYGDIIEATREHTELAENLGDHATAHML  151 (180)
T ss_dssp             CSCCCCSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred             CCCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
Confidence            45444443333 3445555666666777899999999999999997653

>d1umna_ a.25.1.1 (A:) Dodecameric ferritin homolog {Streptococcus suis [TaxId: 1307]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Dodecameric ferritin homolog
species: Streptococcus suis [TaxId: 1307]

Probab=98.45  E-value=1.9e-06  Score=66.34  Aligned_cols=114  Identities=12%  Similarity=0.004  Sum_probs=90.7

Q ss_pred             HHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeec--------cCC
Q 028202           94 ECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLH--------SIM  165 (212)
Q Consensus        94 eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~--------~I~  165 (212)
                      ++.+.||..+.........|....-+..  +.++.++.+||.++++|+++|+..+.+++...||.|...        .|+
T Consensus         3 ~~~~~Ln~~la~~~~l~~~~~~~HWnv~--G~~F~~lH~~f~~~~~e~~~~~D~lAERi~~lGg~p~~~~~~~~~~s~i~   80 (151)
T d1umna_           3 DSKAVLNQAVADLSVAHSILHQVHWYMR--GRGFMIWHPKMDEYMEEIDGYLDEMSERLITLGGAPFSTLKEFSENSQLK   80 (151)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCSCC
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhhccee--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHHHccCc
Confidence            5778899999999999988888665555  568999999999999999999999999999999988543        244


Q ss_pred             CCC--CcCccccccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhh
Q 028202          166 QPP--SEFDHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILL  209 (212)
Q Consensus       166 ~P~--~e~~~~e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~  209 (212)
                      ..+  ..++..+....+...+..+...+++++..+.+.+|++|.-+
T Consensus        81 e~~~~~~~~~~~ml~~~~~~~~~~~~~~~~~~~~a~~~~D~~t~dl  126 (151)
T d1umna_          81 EVLGDYNVTIEEQLARVVEVFRYLAALFQKGFDVSDEEGDSVTNDI  126 (151)
T ss_dssp             CCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred             cccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
Confidence            322  23333344555666666777799999999999999998654

>d2oh3a1 a.25.1.8 (A:3-154) Uncharacterized protein AMB4284 homologue {Magnetospirillum magnetotacticum ms-1 [TaxId: 272627]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: AMB4284-like
domain: Uncharacterized protein AMB4284 homologue
species: Magnetospirillum magnetotacticum ms-1 [TaxId: 272627]

Probab=98.45  E-value=2e-06  Score=64.52  Aligned_cols=110  Identities=9%  Similarity=-0.041  Sum_probs=78.3

Q ss_pred             HHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccCC-CC-----C
Q 028202           95 CEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIM-QP-----P  168 (212)
Q Consensus        95 ve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I~-~P-----~  168 (212)
                      +.++||..|..|..+...|..++..+.  +.+.+.++++|+..+.+|++|+..|.+.+..+++.+....-. .+     .
T Consensus         3 ~~e~L~~Ai~~E~~a~~~Y~~~a~~~~--~~~~~~~~~~f~~la~eE~~H~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (152)
T d2oh3a1           3 LAEFLAHAIALETEAAERYVELADMME--AHNNLDTATVFRDMARFSTLHGDEIKQRSRALELPKLMSWQYRWKTPPEVG   80 (152)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCCGGGTSCCCCCCSS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHh--hcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcchhhhccccchhHH
Confidence            578999999999999999999999999  558999999999999999999999999999999876543211 10     0


Q ss_pred             CcCccccccccHHHHHHHHHH---HHHHHHHHHHhcCChhh
Q 028202          169 SEFDHAEKGDALYGKFSGLTA---ALNHLIYSISRLKSYNV  206 (212)
Q Consensus       169 ~e~~~~e~~d~l~a~E~aLt~---~Ine~i~~~~~~kD~~~  206 (212)
                      .........+...+++.++..   .+.--...+...+|..+
T Consensus        81 ~~~~~~~~~~~~~~l~~Al~~E~~a~~~Y~~~a~~~~d~~~  121 (152)
T d2oh3a1          81 DENDIHYLMTPYHALRYARDNEIRGMEYYKEAAANSADPEV  121 (152)
T ss_dssp             CC---CGGGSHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
T ss_pred             HHHhhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence            000011124556777777774   22222233445566554

>d1n1qa_ a.25.1.1 (A:) Dodecameric ferritin homolog {Bacillus brevis, Dps [TaxId: 1393]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Dodecameric ferritin homolog
species: Bacillus brevis, Dps [TaxId: 1393]

Probab=98.41  E-value=2.7e-06  Score=65.26  Aligned_cols=118  Identities=15%  Similarity=0.072  Sum_probs=90.7

Q ss_pred             cccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeee--------
Q 028202           90 KYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKL--------  161 (212)
Q Consensus        90 ~~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l--------  161 (212)
                      +..+.+.+.||+.+...+....+|...--...  +-++.++..+|.++.++..+|++++.+++...||.|..        
T Consensus         4 ~~~~~~~~~Ln~~lA~~~~l~~~~~~~HWnv~--G~~F~~lH~~~ee~y~e~~~~~D~iAERi~~Lgg~p~~~~~~~~~~   81 (149)
T d1n1qa_           4 SIQQLVAVLLNRQVANWVVLYVKLHNFHWNVN--GPNFFTLHEKFEELYTEASGHIDTLAERVLSIGGSPIATLAASLEE   81 (149)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhhhhcee--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCccHHHHHhh
Confidence            34567888899998888877777776655555  45799999999999999999999999999999999855        


Q ss_pred             ccCCCCCCcCccccccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhh
Q 028202          162 HSIMQPPSEFDHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILL  209 (212)
Q Consensus       162 ~~I~~P~~e~~~~e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~  209 (212)
                      ..++.+....+..+....+..-+..+...+++.+..|.+.+|++|.-+
T Consensus        82 s~i~e~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~a~~~~D~~t~dl  129 (149)
T d1n1qa_          82 ASIKEATGGESAAEMVSSVVNDFVDLVGELKVARDVADEADDEATADM  129 (149)
T ss_dssp             CCSCCCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred             CCCccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
Confidence            345555554444444444444455566789999999999999998754

>d2fjca1 a.25.1.1 (A:27-177) Dodecameric ferritin homolog {Treponema pallidum, TpF1 [TaxId: 160]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Dodecameric ferritin homolog
species: Treponema pallidum, TpF1 [TaxId: 160]

Probab=98.38  E-value=3.7e-06  Score=64.56  Aligned_cols=116  Identities=8%  Similarity=-0.004  Sum_probs=91.0

Q ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeec--------cC
Q 028202           93 DECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLH--------SI  164 (212)
Q Consensus        93 ~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~--------~I  164 (212)
                      ..+.+.||+.+...+....+|....-...  +.++..+..+|.++.++.++|+..+.+++...||.|...        .|
T Consensus         7 ~~~~~~Ln~~lA~~~~l~~k~~~~HWnv~--G~~F~~lH~~f~~~y~~~~~~~D~iAERi~~Lgg~p~~t~~~~~~~s~i   84 (151)
T d2fjca1           7 AAICEQLRQHVADLGVLYIKLHNYHWHIY--GIEFKQVHELLEEYYVSVTEAFDTIAERLLQLGAQAPASMAEYLALSGI   84 (151)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHEE--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCCS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhheeee--CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCHHHHHHhCCC
Confidence            45788999999999988888887776666  568999999999999999999999999999999998653        45


Q ss_pred             CCCCCc-CccccccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhhh
Q 028202          165 MQPPSE-FDHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILLV  210 (212)
Q Consensus       165 ~~P~~e-~~~~e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~~  210 (212)
                      +.++.+ ++..+....+...+..+...+++.+..|.+.+|++|.-+.
T Consensus        85 ~e~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~a~~~~D~~t~~ll  131 (151)
T d2fjca1          85 AEETEKEITIVSALARVKRDFEYLSTRFSQTQVLAAESGDAVTDGII  131 (151)
T ss_dssp             CCCCCCSEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred             CccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHhHHHHH
Confidence            444333 2323334444555555566889999999999999987653

>d1ji4a_ a.25.1.1 (A:) Dodecameric ferritin homolog {Helicobacter pylori, Nap [TaxId: 210]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Dodecameric ferritin homolog
species: Helicobacter pylori, Nap [TaxId: 210]

Probab=98.17  E-value=1.5e-05  Score=60.77  Aligned_cols=113  Identities=8%  Similarity=-0.030  Sum_probs=86.5

Q ss_pred             HHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeec--------cCCC
Q 028202           95 CEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLH--------SIMQ  166 (212)
Q Consensus        95 ve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~--------~I~~  166 (212)
                      ..+.||..+.........|..+.-...  +.++..+..+|.+++++..+|+..+.+++...||.|.-.        .|+.
T Consensus         3 ~~~~L~~~lA~~~~l~~~~~~~HWnv~--G~~F~~lH~~f~e~y~~~~~~~D~iAERi~~LG~~p~~~~~~~~~~s~i~~   80 (144)
T d1ji4a_           3 TFEILKHLQADAIVLFMKVHNFHWNVK--GTDFFNVHKATEEIYEEFADMFDDLAERIVQLGHHPLVTLSEAIKLTRVKE   80 (144)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHEE--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCSHHHHHHHCCSCC
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcccee--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHHhcCCcc
Confidence            467888887777766666665554444  558999999999999999999999999999999998533        3455


Q ss_pred             CCCcCc-cccccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhh
Q 028202          167 PPSEFD-HAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILL  209 (212)
Q Consensus       167 P~~e~~-~~e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~  209 (212)
                      |+.++. ..+....+..-+..+...+++++..|.+.+|++|.-+
T Consensus        81 ~~~~~~~~~~ml~~l~~~~~~~~~~~~~~~~~a~~~~D~~t~~l  124 (144)
T d1ji4a_          81 ETKTSFHSKDIFKEILEDYKYLEKEFKELSNTAEKEGDKVTVTY  124 (144)
T ss_dssp             CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred             cCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
Confidence            554443 3344555666667777799999999999999998755

>d1dpsa_ a.25.1.1 (A:) Dodecameric ferritin homolog {Escherichia coli, Dps [TaxId: 562]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Dodecameric ferritin homolog
species: Escherichia coli, Dps [TaxId: 562]

Probab=97.94  E-value=0.00011  Score=57.01  Aligned_cols=67  Identities=10%  Similarity=0.077  Sum_probs=55.6

Q ss_pred             ccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCee
Q 028202           91 YEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKV  159 (212)
Q Consensus        91 ~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V  159 (212)
                      -.+++.++||+.+..++.-..+|....-...  +-++..+..+|.++++++++|+.++.+++...||.|
T Consensus        17 ~~~~~~~~L~~~la~~~~L~~~~~~~HWnv~--G~~F~~lH~~fee~y~e~~~~~D~iAERI~~Lgg~p   83 (159)
T d1dpsa_          17 EKKATVELLNRQVIQFIDLSLITKQAHWNMR--GANFIAVHEMLDGFRTALIDHLDTMAERAVQLGGVA   83 (159)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCB--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhccee--CCCHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence            4457888899888888777777665544444  457889999999999999999999999999999998

>d2fzfa1 a.25.1.1 (A:10-167) Hypothetical protein PF1190 {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Hypothetical protein PF1190
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=97.84  E-value=0.00016  Score=53.78  Aligned_cols=63  Identities=16%  Similarity=0.146  Sum_probs=57.0

Q ss_pred             HHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeec
Q 028202           95 CEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLH  162 (212)
Q Consensus        95 ve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~  162 (212)
                      ++++|+..|..|..+...|..++..+.     -+++.++|...+.+|.+|+..|.+++..+||.+...
T Consensus        12 l~e~l~~ai~~E~~a~~~Y~~~a~~~~-----~~~~~~~f~~la~eE~~H~~~~~~~~~~~~~~~~~~   74 (158)
T d2fzfa1          12 LEELLGMAIKAEIGAREFYKSLAEKIK-----IEALKEKINWLAEEEKKHEALLRKLYSQMFPGKEVV   74 (158)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHSCC-----CTTHHHHHHHHHHHTHHHHHHHHHHHHHHSTTCCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCC-----ChhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccc
Confidence            578999999999999999999999876     367899999999999999999999999999987543

>d2bk6a1 a.25.1.1 (A:7-156) Dodecameric ferritin homolog {Listeria innocua [TaxId: 1642]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Dodecameric ferritin homolog
species: Listeria innocua [TaxId: 1642]

Probab=97.84  E-value=0.0001  Score=56.12  Aligned_cols=114  Identities=13%  Similarity=0.063  Sum_probs=81.8

Q ss_pred             HHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeecc--------CCC
Q 028202           95 CEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHS--------IMQ  166 (212)
Q Consensus        95 ve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~--------I~~  166 (212)
                      +.+.||..+..-.-....|...- |.-+ +.+...+..+|.++.++.++|+..+.+++...||.|.-..        |+.
T Consensus         3 ~~e~L~~~lA~~~~l~~k~~~~H-Wnv~-G~~F~~lH~~~e~~y~~~~~~~D~iAERi~~Lg~~p~~~~~~~~~~s~i~e   80 (150)
T d2bk6a1           3 TKEFLNHQVANLNVFTVKIHQIG-WYMR-GHNFFTLHEKMDDLYSEFGEQMDEVAERLLAIGGSPFSTLKEFLENASVEE   80 (150)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHH-HHCC-STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCCSCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhh-hhee-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHccCcc
Confidence            46788888776665555555443 3333 4689999999999999999999999999999999875543        333


Q ss_pred             CCC-cCccc-cccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhhh
Q 028202          167 PPS-EFDHA-EKGDALYGKFSGLTAALNHLIYSISRLKSYNVILLV  210 (212)
Q Consensus       167 P~~-e~~~~-e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~~  210 (212)
                      .+. ...+. +....+...+..+...+++++..|.+.+|++|.-+.
T Consensus        81 ~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~a~~~~D~~t~dll  126 (150)
T d2bk6a1          81 APYTKPKTMDQLMEDLVGTLELLRDEYKQGIELTDKEGDDVTNDML  126 (150)
T ss_dssp             CCCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred             cCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
Confidence            222 22222 234445555666667899999999999999987553

>d2ib0a1 a.25.1.9 (A:17-158) Hypothetical protein Rv2844 {Mycobacterium tuberculosis [TaxId: 1773]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Rv2844-like
domain: Hypothetical protein Rv2844
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.69  E-value=0.00023  Score=53.66  Aligned_cols=95  Identities=15%  Similarity=0.168  Sum_probs=66.5

Q ss_pred             HHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccCCCC-CCcCccc
Q 028202           96 EAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQP-PSEFDHA  174 (212)
Q Consensus        96 e~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I~~P-~~e~~~~  174 (212)
                      .++||..|..|+.+.|.|-..+.+++      ++....|....++|+.|++.|.+.+..+||.+........ +..++++
T Consensus         7 ~~~L~~AL~~E~aaiy~Y~~a~~~~~------~~~~~~~~~~~~~e~~H~~~L~~~i~~lgg~p~~~~~~~~~~~~~td~   80 (142)
T d2ib0a1           7 NAALCDALAVEHATIYGYGIVSALSP------PGVNFLVADALKQHRHRRDDVIVMLSARGVTAPIAAAGYQLPMQVSSA   80 (142)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHSC------GGGHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSSCCCSSCCCSH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCccccccccCCCCCCH
Confidence            47899999999999999977776665      4567788888999999999999999999999766432211 1122222


Q ss_pred             c-ccccHHHHHHHHHHHHHHHHH
Q 028202          175 E-KGDALYGKFSGLTAALNHLIY  196 (212)
Q Consensus       175 e-~~d~l~a~E~aLt~~Ine~i~  196 (212)
                      . .......+|......++.++.
T Consensus        81 ~~~l~~a~~~E~~a~~~Y~~~~~  103 (142)
T d2ib0a1          81 ADAARLAVRMENDGATAWRAVVE  103 (142)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Confidence            2 234444555555555665543

>d2yw6a1 a.25.1.1 (A:17-157) Dodecameric ferritin homolog {Mycobacterium smegmatis [TaxId: 1772]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Dodecameric ferritin homolog
species: Mycobacterium smegmatis [TaxId: 1772]

Probab=97.39  E-value=0.0012  Score=49.51  Aligned_cols=112  Identities=13%  Similarity=0.042  Sum_probs=76.6

Q ss_pred             HHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeee--------eccCCC
Q 028202           95 CEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVK--------LHSIMQ  166 (212)
Q Consensus        95 ve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~--------l~~I~~  166 (212)
                      +.+.||+++.........+...--...  .-++.++..+|.++.++..+|+..+.+++...||.|.        ...++.
T Consensus         1 v~~~L~~~La~~~~L~~~~~~~HWnv~--G~~F~~~H~~fee~y~~~~~~~D~iAERi~~Lg~~p~~~~~~~~~~s~~~~   78 (141)
T d2yw6a1           1 VADLLQKQLSTYNDLHLTLKHVHWNVV--GPNFIGVHEMIDPQVELVRGYADEVAERIATLGKSPKGTPGAIIKDRTWDD   78 (141)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHEE--STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCCSCC
T ss_pred             CHHHHHHHHHHHHHHHHHHHhcccccc--CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHHHcCCCc
Confidence            356788887777655555544332222  4478999999999999999999999999999999873        334554


Q ss_pred             CCCcCcccc-ccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhh
Q 028202          167 PPSEFDHAE-KGDALYGKFSGLTAALNHLIYSISRLKSYNVILL  209 (212)
Q Consensus       167 P~~e~~~~e-~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~  209 (212)
                      ++.+.++++ ....+...+..+...+++.+..+. .+|.+|.-+
T Consensus        79 ~~~~~~~~~~~l~~l~~~~~~~~~~~r~~~~~a~-~~D~~T~dl  121 (141)
T d2yw6a1          79 YSVERDTVQAHLAALDLVYNGVIEDTRKSIEKLE-DLDLVSQDL  121 (141)
T ss_dssp             CCCCSEEHHHHHHHHHHHHHHHHHHHHHHHHHHT-TTCHHHHHH
T ss_pred             cCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHhh-CCCHHHHHH
Confidence            555444432 233344444445567888888885 479887643

>d1vjxa_ a.25.1.1 (A:) Hypothetical protein TM1526 {Thermotoga maritima [TaxId: 2336]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Hypothetical protein TM1526
species: Thermotoga maritima [TaxId: 2336]

Probab=96.76  E-value=0.014  Score=42.68  Aligned_cols=60  Identities=23%  Similarity=0.283  Sum_probs=52.1

Q ss_pred             HHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeee
Q 028202           95 CEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVK  160 (212)
Q Consensus        95 ve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~  160 (212)
                      +.+.|+..|..|..+...|..++.-++      +.+...|..-+.+|++|+..|.+.+...|+.+.
T Consensus         7 ~~e~l~~Ai~~E~~~~~~Y~~~a~~~~------~~~~~~f~~la~eE~~H~~~l~~~~~~~~~~~~   66 (149)
T d1vjxa_           7 VSDILTVAIRLEEEGERFYRELSEHFN------GEIKKTFLELADQERIHAEIFRKMSDQENWDEV   66 (149)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTSCC------SHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence            567899999999999999998876553      457899999999999999999999999988643

>d1zs3a1 a.25.1.1 (A:3-173) Dodecameric ferritin homolog {Lactococcus lactis, DpsB [TaxId: 1358]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Dodecameric ferritin homolog
species: Lactococcus lactis, DpsB [TaxId: 1358]

Probab=96.40  E-value=0.016  Score=45.62  Aligned_cols=110  Identities=8%  Similarity=0.101  Sum_probs=73.2

Q ss_pred             HHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeee--------eccCCC
Q 028202           95 CEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVK--------LHSIMQ  166 (212)
Q Consensus        95 ve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~--------l~~I~~  166 (212)
                      ..+.||..+..-+. -|+=+.-+.|.=+   | +.+..||.++.++..++..++-+++...||.|-        +..|+.
T Consensus        25 a~amLn~lLAn~~v-l~~K~~~~HWnv~---G-~~lH~~fee~y~~~~~~~D~iAEri~~lG~~p~~t~~e~~e~s~i~e   99 (171)
T d1zs3a1          25 AGAMLGHVLSNLFI-ENIRLTQAGIYAK---S-PVKCEYLREIAQREVEYFFKISDLLLDENEIVPSTTEEFLKYHKFIT   99 (171)
T ss_dssp             HHHHHHHHHHHHHH-HHHHHHHHHHHCS---S-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCCSCC
T ss_pred             HHHHHHHHHHHHHH-HHHHHHcCceeeE---C-hHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCccHHHHHHHccCcc
Confidence            45568877655443 3333344445443   3 478999999999999999999999999999973        234433


Q ss_pred             CCCc---CccccccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhh
Q 028202          167 PPSE---FDHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILL  209 (212)
Q Consensus       167 P~~e---~~~~e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~  209 (212)
                      .+..   ++..++...+..--..+...+++.|..+.+++|+++.-+
T Consensus       100 ~~~~~~~~s~~eml~~Lv~d~~~~~~~~~~~i~~A~~e~D~~tadl  145 (171)
T d1zs3a1         100 EDPKAKYWTDEDLLESFIVDFQAQNMFITRAIKLANKEEKFALAAG  145 (171)
T ss_dssp             CCGGGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
Confidence            2221   222223333333334444678999999999999998754

>d1zpya1 a.25.1.5 (A:4-94) Hypothetical protein NE0167 {Nitrosomonas europaea [TaxId: 915]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: half-ferritin
domain: Hypothetical protein NE0167
species: Nitrosomonas europaea [TaxId: 915]

Probab=96.14  E-value=0.014  Score=41.96  Aligned_cols=57  Identities=19%  Similarity=0.273  Sum_probs=48.6

Q ss_pred             HHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 028202           94 ECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRG  156 (212)
Q Consensus        94 eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RG  156 (212)
                      ++..+|.- +-.|+.|.+.|.+++..++     -+.+-+.|.+-++||.+|+-.|++++..++
T Consensus        16 d~~Rai~s-li~EleAI~~Y~q~a~~t~-----d~~~k~Vl~hia~EEkeH~g~~LelLrr~D   72 (91)
T d1zpya1          16 DMHRAIIS-LREELEAVDLYNQRVNACK-----DKELKAILAHNRDEEKEHAAMLLEWIRRCD   72 (91)
T ss_dssp             HHHHHHHH-HHHHHHHHHHHHHHHHHCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHH-HHHHHHHHHHHHHHHHhCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence            45566664 4489999999999999988     467788999999999999999999998765

>d1zuja1 a.25.1.1 (A:6-173) Dodecameric ferritin homolog {Lactococcus lactis, DpsA [TaxId: 1358]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Dodecameric ferritin homolog
species: Lactococcus lactis, DpsA [TaxId: 1358]

Probab=95.28  E-value=0.13  Score=39.88  Aligned_cols=110  Identities=11%  Similarity=0.117  Sum_probs=71.0

Q ss_pred             HHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeee--------eccCCC
Q 028202           95 CEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVK--------LHSIMQ  166 (212)
Q Consensus        95 ve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~--------l~~I~~  166 (212)
                      .-+.||..+..-+-....+. -+.|.=+   | ++|-.+|.++.++..++...+-+++...|+.|-        ...|+.
T Consensus        22 agamln~vLAn~~vl~~K~~-~~HWnV~---G-~~FH~~fee~y~~~~~~~D~iAEri~~lG~~~~~t~~e~~~~s~i~E   96 (168)
T d1zuja1          22 AGAMLSHVLSNIFYEKISLM-QAGLYAK---S-ANYRIKFREIALKEDEWFYLISEQLLDENELVPTTLDEFVSNHKFIE   96 (168)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH-HHHHHCS---S-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCCSCC
T ss_pred             HHHHHHHHHHHHHHHHHHHH-cceeeee---C-cHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCcHHHHHHHccCcc
Confidence            44568877755444333333 3334332   3 678999999999999999999999999999863        233432


Q ss_pred             --CCCc-CccccccccHHHHHHHHHHHHHHHHHHHHhcCChhhhhh
Q 028202          167 --PPSE-FDHAEKGDALYGKFSGLTAALNHLIYSISRLKSYNVILL  209 (212)
Q Consensus       167 --P~~e-~~~~e~~d~l~a~E~aLt~~Ine~i~~~~~~kD~~~~~~  209 (212)
                        |... ++..++...+..--..+...+++++..+.+++|+++.-+
T Consensus        97 ~~~~~~~~s~~~ml~~li~d~~~~~~~~~~~i~~A~~~~D~~t~~~  142 (168)
T d1zuja1          97 NDPKAKYWTDEALIENFINDFQNQNLFIGRAIKLAQKEEKFSLELA  142 (168)
T ss_dssp             CCTTGGGSCHHHHHHHHHHHHHHHHHHHHHHTHHHHHTTCHHHHHH
T ss_pred             cccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence              2222 222222333332333344578999999999999998754

>d1lkoa1 a.25.1.1 (A:2-147) Rubrerythrin, N-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Rubrerythrin, N-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=92.93  E-value=0.15  Score=37.36  Aligned_cols=62  Identities=13%  Similarity=0.216  Sum_probs=53.4

Q ss_pred             ccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 028202           91 YEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNL  154 (212)
Q Consensus        91 ~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~  154 (212)
                      ....+...+...+..|..+.-.|-.++..+.  ..+-+..+.||.....+|.+|+..|-+++..
T Consensus        79 ~~~~~~~l~~~~~~~e~e~~~~y~~~~~~a~--~~~D~~~~~~f~~i~~~E~~H~~~f~~~l~~  140 (146)
T d1lkoa1          79 IADTHANLIASAAGEHHEYTEMYPSFARIAR--EEGYEEIARVFASIAVAEEFHEKRFLDFARN  140 (146)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHH--HHTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4456677778888888899999999999998  4589999999999999999999999887754

>d1yuza1 a.25.1.1 (A:23-157) Nigerythrin, N-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Nigerythrin, N-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=92.53  E-value=0.11  Score=37.66  Aligned_cols=52  Identities=19%  Similarity=0.208  Sum_probs=43.1

Q ss_pred             HHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHH
Q 028202           96 EAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFM  149 (212)
Q Consensus        96 e~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLi  149 (212)
                      ...+......|..+.-.|-.+...+++  .|.+..+.||.....+|..|+++|+
T Consensus        84 ~~L~~~~~~ee~e~~~~Y~~~~~~A~~--~~d~~~~~~f~~i~~~E~~H~e~F~  135 (135)
T d1yuza1          84 LNLISGANGEIYETSDMYPAFIRKAQE--EGNSKAVHVFTRAKLAESVHAERYL  135 (135)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHHHHHH--HTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHH--cCCHHHHHHHHHHHHHHHHHHHHhC
Confidence            444444455567889999999999995  4899999999999999999999985

>d2fkza1 a.25.1.1 (A:1-154) Bacterioferritin (cytochrome b1) {Azotobacter vinelandii [TaxId: 354]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Bacterioferritin (cytochrome b1)
species: Azotobacter vinelandii [TaxId: 354]

Probab=89.40  E-value=0.74  Score=33.52  Aligned_cols=61  Identities=11%  Similarity=0.152  Sum_probs=53.5

Q ss_pred             ccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 028202           91 YEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQN  153 (212)
Q Consensus        91 ~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln  153 (212)
                      ....+.+.+...+..|..+.-.|..+...++  +.+-++..+||+.--.||.+|+..|-+++.
T Consensus        79 ~~~~~~e~l~~~l~~E~~~~~~y~~~~~~a~--~~~D~~t~~~l~~il~eE~~h~~~l~~~L~  139 (154)
T d2fkza1          79 IGEHTKEMLECDLKLEQAGLPDLKAAIAYCE--SVGDYASRELLEDILESEEDHIDWLETQLD  139 (154)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3456788888899999999999999999999  458899999999999999999999877665

>d1vjxa_ a.25.1.1 (A:) Hypothetical protein TM1526 {Thermotoga maritima [TaxId: 2336]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Hypothetical protein TM1526
species: Thermotoga maritima [TaxId: 2336]

Probab=88.45  E-value=0.91  Score=32.26  Aligned_cols=55  Identities=22%  Similarity=0.271  Sum_probs=48.0

Q ss_pred             HHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 028202           94 ECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQN  153 (212)
Q Consensus        94 eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln  153 (212)
                      ...++|...|..|..+...|..++..+.     =+...+.|..-+.+|+.|...|-++.-
T Consensus        92 ~~~~~l~~ai~~E~~a~~~Y~~l~~~~~-----d~~~r~~~~~i~~eE~~H~~~l~~l~~  146 (149)
T d1vjxa_          92 TLKEVLDIAISVEKDSIILYYELKDGLV-----NSDAQKTVKKIIDQEKEHLRKLLEMKR  146 (149)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHCC-----SHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            4578899999999999999999987765     467899999999999999999988764

>d2oh3a1 a.25.1.8 (A:3-154) Uncharacterized protein AMB4284 homologue {Magnetospirillum magnetotacticum ms-1 [TaxId: 272627]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: AMB4284-like
domain: Uncharacterized protein AMB4284 homologue
species: Magnetospirillum magnetotacticum ms-1 [TaxId: 272627]

Probab=87.32  E-value=1.5  Score=30.98  Aligned_cols=59  Identities=14%  Similarity=-0.019  Sum_probs=50.6

Q ss_pred             cHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 028202           92 EDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLR  155 (212)
Q Consensus        92 s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~R  155 (212)
                      .....++|...|..|-.+...|..++..+.     =+...+.|...+.+|.+|+..|-+++...
T Consensus        88 ~~~~~~~l~~Al~~E~~a~~~Y~~~a~~~~-----d~~~r~~~~~l~~~E~~H~~~l~~~l~~~  146 (152)
T d2oh3a1          88 LMTPYHALRYARDNEIRGMEYYKEAAANSA-----DPEVKRLGADFAAEEAEHVVALDKWIEKT  146 (152)
T ss_dssp             GGSHHHHHHHHHHHHHHHHHHHHHHHHHCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHHHHcC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            345778899999999999999999988776     26788889999999999999998888765

>d2fzfa1 a.25.1.1 (A:10-167) Hypothetical protein PF1190 {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Hypothetical protein PF1190
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=85.92  E-value=1.9  Score=30.51  Aligned_cols=59  Identities=14%  Similarity=0.049  Sum_probs=49.2

Q ss_pred             ccHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHH---HHHHHh
Q 028202           91 YEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKF---MEYQNL  154 (212)
Q Consensus        91 ~s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekL---ieyln~  154 (212)
                      ....+.++|...+..|..+...|..++..+.     =+...+.|.....+|.+|...+   ++++.+
T Consensus        93 ~~~~~~~~l~~a~~~E~~a~~~Y~~la~~~~-----d~~~~~l~~~i~~~E~~H~~~l~~~~d~l~~  154 (158)
T d2fzfa1          93 KVQDIIDLIRWAMKAEEIAAEFYLKLEEMVK-----EEEKKRLMRYLADMERGHYYTLRAEYELLLN  154 (158)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHHHHTSC-----SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHHHHhcC-----cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            4557888999999999999999999998775     3688899999999999999655   566654

>d1nf4a_ a.25.1.1 (A:) Bacterioferritin (cytochrome b1) {Desulfovibrio desulfuricans [TaxId: 876]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Bacterioferritin (cytochrome b1)
species: Desulfovibrio desulfuricans [TaxId: 876]

Probab=84.91  E-value=1.7  Score=32.08  Aligned_cols=58  Identities=14%  Similarity=0.131  Sum_probs=49.2

Q ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 028202           93 DECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQ  152 (212)
Q Consensus        93 ~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyl  152 (212)
                      ....+.|...+..|..+.-.|..+...++  ..+-++...||..-..||.+|...|-+.+
T Consensus        83 ~~~~e~l~~~l~~E~~~~~~y~~~~~~A~--~~~D~~t~~~l~~il~eE~~H~~~~e~~l  140 (169)
T d1nf4a_          83 QAVPVIYESDADQEDATIEAYSQFLKVCK--EQGDIVTARLFERIIEEEQAHLTYYENIG  140 (169)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34556788889999999999999999999  44789999999999999999997666543

>d2htna1 a.25.1.1 (A:1-158) Bacterioferritin (cytochrome b1) {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Bacterioferritin (cytochrome b1)
species: Escherichia coli [TaxId: 562]

Probab=84.27  E-value=2.1  Score=31.02  Aligned_cols=60  Identities=12%  Similarity=0.146  Sum_probs=51.7

Q ss_pred             cHHHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 028202           92 EDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQN  153 (212)
Q Consensus        92 s~eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln  153 (212)
                      ...+.+.|...+..|..+.-.|......++  ..+=++...||.....+|.+|+..|-+++.
T Consensus        80 ~~~~~~~l~~~~~~e~~~~~~~~~~~~~a~--~~~D~~t~~~l~~il~eee~h~~~l~~~L~  139 (158)
T d2htna1          80 GEDVEEMLRSDLALELDGAKNLREAIGYAD--SVHDYVSRDMMIEILRDEEGHIDWLETELD  139 (158)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            345677888889999999999999999998  447899999999999999999999876654

>d1nnqa1 a.25.1.1 (A:2-134) Rubrerythrin, N-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Rubrerythrin, N-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=82.92  E-value=2  Score=31.02  Aligned_cols=50  Identities=18%  Similarity=0.178  Sum_probs=42.3

Q ss_pred             hhhhh-hHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 028202          102 QINVE-YNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQN  153 (212)
Q Consensus       102 QIn~E-l~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln  153 (212)
                      .+..| ..+.-.|-..+..|..  .|.++.+.+|.....+|..|++.|-+.+.
T Consensus        75 ~~~~e~~e~~~~Y~e~~~~a~~--egd~~~a~~f~~i~~~E~~Ha~~f~~~l~  125 (133)
T d1nnqa1          75 GIEGETFEVEEMYPVYNKAAEF--QGEKEAVRTTHYALEAEKIHAELYRKAKE  125 (133)
T ss_dssp             HHHHHHHHHHTHHHHHHHHHHH--TTCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34444 6677889999999995  49999999999999999999999987764

>d2itba1 a.25.1.7 (A:3-201) Putative tRNA-(Ms(2)io(6)a)-hydroxylase PP2188 {Pseudomonas putida [TaxId: 303]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: MiaE-like
domain: Putative tRNA-(Ms(2)io(6)a)-hydroxylase PP2188
species: Pseudomonas putida [TaxId: 303]

Probab=82.36  E-value=3.3  Score=32.77  Aligned_cols=68  Identities=19%  Similarity=0.276  Sum_probs=55.4

Q ss_pred             HHHHHHHHhhhhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeeccCCCC
Q 028202           94 ECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNLRGGKVKLHSIMQP  167 (212)
Q Consensus        94 eve~aLNeQIn~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~RGG~V~l~~I~~P  167 (212)
                      .....|.++-+-|--|+..=++|=+-|.    ..+.+-.-+-.-+.||++|-++.++-|..||..  +..+.++
T Consensus        24 ~~~~~L~DHA~cEkKAA~~Alsli~rYp----~~~~Lv~~m~~La~EEL~HF~qV~~im~~Rgi~--l~~~~~~   91 (199)
T d2itba1          24 DQETLLIDHKNCEFKAASTALSLIAKYN----THLDLINMMSRLAREELVHHEQVLRLMKRRGVP--LRPVSAG   91 (199)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHTT----TCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC--CCCCCCC
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHCC----ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC--CCCCCcc
Confidence            3568899999999999998776654444    467889999999999999999999999999965  4455444

>d1j30a_ a.25.1.1 (A:) Hypothetical rubrerythrin {Archaeon Sulfolobus tokodaii [TaxId: 111955]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ferritin
domain: Hypothetical rubrerythrin
species: Archaeon Sulfolobus tokodaii [TaxId: 111955]

Probab=81.38  E-value=3.1  Score=29.42  Aligned_cols=47  Identities=21%  Similarity=0.397  Sum_probs=39.8

Q ss_pred             hhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 028202          106 EYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNL  154 (212)
Q Consensus       106 El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~  154 (212)
                      |..+...|-..+..+...  +-++.+.||.....+|.+|+..|-+.+.+
T Consensus        91 ~~e~~~~y~~~~~~A~~e--~d~~~~~~~~~i~~~E~~H~~~f~~~l~~  137 (141)
T d1j30a_          91 TYEWTQMYPGFAKVAREE--GFPEVAEWFETLARAEKSHAEKFQNVLKQ  137 (141)
T ss_dssp             HHHHHTHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            455777888888888854  89999999999999999999998877643

>d2cwla1 a.25.1.3 (A:1-299) Manganese catalase (T-catalase) {Thermus thermophilus [TaxId: 274]}

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Manganese catalase (T-catalase)
domain: Manganese catalase (T-catalase)
species: Thermus thermophilus [TaxId: 274]

Probab=81.34  E-value=2.3  Score=35.65  Aligned_cols=66  Identities=18%  Similarity=0.116  Sum_probs=52.4

Q ss_pred             cHHHHHHHHHhh---hhhhHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHh-cCCe
Q 028202           92 EDECEAAINEQI---NVEYNVSYVYHALYAYFDRDNIALRGLAKFFKESSEEEREHAEKFMEYQNL-RGGK  158 (212)
Q Consensus        92 s~eve~aLNeQI---n~El~ASy~YlsMAayFdrdnvgL~GfAkFFr~qS~EEreHAekLieyln~-RGG~  158 (212)
                      ++..-++|.+|+   +-|+.++.+|+..+.-|... -.++-+...+..-+.||+.|.+.+-.-++. .+|.
T Consensus        19 dP~~A~~l~e~~GG~~GEmsa~mqYl~Q~~~~~~~-~~~~~~~dll~dIatEEl~HlEmvat~I~~Ll~~~   88 (299)
T d2cwla1          19 DPNAAAAVQALLGGRFGEMSTLMNYMYQSFNFRGK-KALKPYYDLIANIATEELGHIELVAATINSLLAKN   88 (299)
T ss_dssp             CHHHHHHHGGGTTSTTSHHHHHHHHHHHHHHCSCT-TTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSS
T ss_pred             CHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCCCc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            455566777776   67999999999999888743 256779999999999999999999887755 3443