Citrus Sinensis ID: 028345

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210
MSSLAFSVGNCSLTKLTTLKTRRLSRHFNKTEVSAIKFSSQQQNSCPPQKLHHLNENPTPFRRREAIGFGLCFGLVDVVLQTQPSSAAEAAAPSPCELTVAPSGLAFCDKVVGVGPEAVKGQLIKAHYVGKLENGKVFDSSYNRGKPLIFRLGVGEVCNQCANKSNRVKSWSLEFDNNQLSFETCFPIFIWWLWFYNGSKTIICQLLPYP
cccccccccccccccccccHHHHcccccccccHHHHcccccccccccccccccccccccccHHHHHcccccccccHHHHHccccccHHHcccccccccEEcccccEEEEEEcccccccccccEEEEEEEEECcccccccccccccccEEECcccccCEccccccccccccHHHHHcccccccCECccccccccccccccccccccccccc
****A*SVGNCSLTKLTTLKTR****************************************RREAIGFGLCFGLVDVVLQT*************CELTVAPSGLAFCDKVVGVGPEAVKGQLIKAHYVGKLENGKVFDSSYNRGKPLIFRLGVGEVCNQCANKSNRVKSWSLEFDNNQLSFETCFPIFIWWLWFYNGSKTIICQLLPYP
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MSSLAFSVGNCSLTKLTTLKTRRLSRHFNKTEVSAIKFSSQQQNSCPPQKLHHLNENPTPFRRREAIGFGLCFGLVDVVLQTQPSSAAEAAAPSPCELTVAPSGLAFCDKVVGVGPEAVKGQLIKAHYVGKLENGKVFDSSYNRGKPLIFRLGVGEVCNQCANKSNRVKSWSLEFDNNQLSFETCFPIFIWWLWFYNGSKTIICQLLPYP

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. Responsive of the major PPIase activity in the chloroplast thylakoid lumen. Regulates the accumulation of Rieske protein, an essential component of the photosynthetic electron transport chain.probableQ9SCY2

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
5.-.-.-Isomerases.probable
5.2.-.-Cis-trans-isomerases.probable
5.2.1.-Cis-trans Isomerases.probable
5.2.1.8Peptidylprolyl isomerase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3JXV, chain A
Confidence level:very confident
Coverage over the Query: 116-159,170-196
View the alignment between query and template
View the model in PyMOL