Citrus Sinensis ID: 028431

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------21
Protein Sequence
MKADQAAVLVADEYIYKQETHLTVFKTSLFFQNDGFTVYNCRGELVFRVDSYGPDTRDKDEHVLMDAHGKCLLTVRRKRPSLHHRWEGYSGERTDGQKPIFSVRRSSIIGRSSVTVEMYENPGEEYQIEGNFWQRSCTIFNAMKESVAEIRRKVDASTQVLLAKDVFLLSVKPGFDGAFAMGLVLVLDQINGDNYVESNGGRVDPVTED
Secondary Structure (PSIPRED)
ccccccEEEEcccccccccEEEEEEEEEcEEEcccEEEEcccccEEEEEEEccccccccccEEEEcccccEEEEEEEccccccccEEEEEcccccccccEEEEEEccccccccEEEEEEcccccEEEEEEEEcccEEEEEcccccEEEEEEEEccccccEEEEccEEEEEEEccccHHHHHHHHHHHHccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccEEEEcccccccccEEEEEEEEEEEEccccEEEEEccccEEEEEccccccccccccEEEEccccccEEEEEcccccHcccEEEEEcccccccccEEEEEEcccEEcccEEEEEEccccccEEEEEccccccEEEEcccccEEEEEEEEEccccEEEEcccEEEEEEcccccHHHHHHHHHHHHHHccccccccccccccccccc
Coil and Loop (DISEMBL)
MKADQAAVLVADEYIYKQETHLTVFktslffqndgftvyncRGELVFrvdsygpdtrdkdehVLMDAHGKClltvrrkrpslhhrwegysgertdgqkpifsvrrssiigrsSVTVemyenpgeeyqiegnFWQRSCTIFNAMKESVAEIRRKVDASTQVLLAKDVfllsvkpgfdgaFAMGLVLVLDQingdnyvesnggrvdpvted
Flexible Loop (DISEMBL)
MKADQAAVLVADEYIYKQETHLTVFKTSLFFQNDGFTVYNCRGELVFRVDSYGPDTRDKDEHVLMDAHGkclltvrrkrpslhhrwegysgertdgqkpifsvrrssiigrssvTVEMYENPGEEYQIEGNFWQRSCTIFNAMKESVAEIRRKVDASTQVLLAKDVFLLSVKPGFDGAFAMGLVLVLDQINGdnyvesnggrvdpvted
Low Complexity Region (SEG)
MKADQAAVLVADEYIYKQETHLTVFKTSLFFQNDGFTVYNCRGELVFRVDSYGPDTRDKDEHVLMDAHGKCLLTVRRKRPSLHHRWEGYSGERTDGQKPifsvrrssiigrssvtvEMYENPGEEYQIEGNFWQRSCTIFNAMKESVAEIRRKVDASTQVLLAKDVFLLSVKPGFDGAFAMGLVLVLDQINGDNYVESNGGRVDPVTED
Disordered region (IsUnstruct)
******AVLVADEYIYKQETHLTVFKTSLFFQNDGFTVYNCRGELVFRVDSYGPDTRDKDEHVLMDAHGKCLLTVRRKRPSLHHRWEGY**********IFSVRRSSIIGRSSVTVEMYENPGEEYQIEGNFWQRSCTIFNAMKESVAEIRRKVDASTQVLLAKDVFLLSVKPGFDGAFAMGLVLVLDQINGDNYV*************
Disordered Region (DISOPRED)
*****AA***ADEYIYKQETHLTVFKTSLFFQNDGFTVYNCRGELVFRVDSYGPDTRDKDEHVLMDAHGKCLLTVRRKRPSLHHRWEGYSGERTDGQKPIFSVRRSSIIGRSSVTVEMYENPGEEYQIEGNFWQRSCTIFNAMKESVAEIRRKVDASTQVLLAKDVFLLSVKPGFDGAFAMGLVLVLDQI*******************
Disordered Region (DISEMBL)
MKADQAAVLVADEYIYKQETHLTVFKTSLFFQNDGFTVYNCRGELVFRVDSYGPDTRDKDEHVLMDAHGKCLLTVRRKRPSLHHRWEGYSGERTDGQKPIFSVRRSSIIGRSSVTVEMYENPGEEYQIEGNFWQRSCTIFNAMKESVAEIRRKVDASTQVLLAKDVFLLSVKPGFDGAFAMGLVLVLDQINGDNYVESNGGRVDPVTED
Disordered Region (DISPRO)
***DQAAVLVADEYIYKQETHLTVFKTSLFFQNDGFTVYNCRGELVFRVDSYGPDTRDKDEHVLMDAHGKCLLTVRRKRPSLHHRWEGYSGERTDGQKPIFSVRRSSIIGRSSVTVEMYENPGEEYQIEGNFWQRSCTIFNAMKESVAEIRRKVDASTQVLLAKDVFLLSVKPGFDGAFAMGLVLVLDQINGD****************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKADQAAVLVADEYIYKQETHLTVFKTSLFFQNDGFTVYNCRGELVFRVDSYGPDTRDKDEHVLMDAHGKCLLTVRRKRPSLHHRWEGYSGERTDGQKPIFSVRRSSIIGRSSVTVEMYENPGEEYQIEGNFWQRSCTIFNAMKESVAEIRRKVDASTQVLLAKDVFLLSVKPGFDGAFAMGLVLVLDQINGDNYVESNGGRVDPVTED
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	209	2.2.26 [Sep-21-2011]
Q9LVZ8	220	Protein LURP-one-related	yes	no	0.966	0.918	0.658	6e-77
Q9SSC7	210	Protein LURP-one-related	no	no	0.980	0.976	0.682	4e-68
Q9ZVI6	196	Protein LURP-one-related	no	no	0.813	0.867	0.435	1e-26
A0MFL4	221	Protein LURP-one-related	no	no	0.889	0.841	0.346	2e-19
Q9SF24	194	Protein LURP-one-related	no	no	0.866	0.932	0.255	1e-17
Q9LZX1	217	Protein LURP-one-related	no	no	0.875	0.843	0.282	1e-17
A0MFH4	215	Protein LURP-one-related	no	no	0.894	0.869	0.254	7e-15
Q9LQ36	224	Protein LURP-one-related	no	no	0.885	0.825	0.256	1e-14
Q9ZUF7	191	Protein LURP-one-related	no	no	0.846	0.926	0.273	4e-14
Q9SH27	215	Protein LURP-one-related	no	no	0.856	0.832	0.312	6e-14

>sp|Q9LVZ8|LOR12_ARATH Protein LURP-one-related 12 OS=Arabidopsis thaliana GN=At3g15810 PE=2 SV=1

 Score =  286 bits (732), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 133/202 (65%), Positives = 165/202 (81%)

Query: 8   VLVADEYIYKQETHLTVFKTSLFFQNDGFTVYNCRGELVFRVDSYGPDTRDKDEHVLMDA 67
           ++V   Y+Y+++  LTV KTSLF+  DGF  Y+CRG+++FRVDSYGPDTRD DE VLMDA
Sbjct: 19  IVVDKAYLYQEDKPLTVCKTSLFYTGDGFAAYDCRGDIIFRVDSYGPDTRDNDEIVLMDA 78

Query: 68  HGKCLLTVRRKRPSLHHRWEGYSGERTDGQKPIFSVRRSSIIGRSSVTVEMYENPGEEYQ 127
            GKCLLTV+RKRP+LH RWEG+ GER++GQKPIFSVRRSSIIGR ++ VE+Y+  GEEY 
Sbjct: 79  TGKCLLTVKRKRPTLHQRWEGFLGERSEGQKPIFSVRRSSIIGRCTMEVEVYDGTGEEYI 138

Query: 128 IEGNFWQRSCTIFNAMKESVAEIRRKVDASTQVLLAKDVFLLSVKPGFDGAFAMGLVLVL 187
           I+G+F QRSC I++  K +VAEI+RKVDAST V+L +DVF L +KPGFDGAFAMGLV+VL
Sbjct: 139 IDGDFSQRSCLIYDTKKCTVAEIKRKVDASTNVMLGRDVFTLEIKPGFDGAFAMGLVVVL 198

Query: 188 DQINGDNYVESNGGRVDPVTED 209
           DQINGD+ VE    +V P  ED
Sbjct: 199 DQINGDDPVEIGDEQVHPFVED 220

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9SSC7|LOR5_ARATH Protein LURP-one-related 5 OS=Arabidopsis thaliana GN=At1g80120 PE=1 SV=1

 Score =  257 bits (656), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 142/208 (68%), Positives = 165/208 (79%), Gaps = 3/208 (1%)

Query: 5   QAAVLVADEYIYKQETHLTVFKTSLFFQNDGFTVYNCRGELVFRVDSYG-PDTRDKDEHV 63
           +  +LV DE+I+ +E  LTV KTSLFF  DGFTVY+C+G LVFRVDSYG P+TRD DE V
Sbjct: 2   KGGLLVDDEFIHGEERSLTVRKTSLFFAGDGFTVYDCKGSLVFRVDSYGGPNTRDTDEVV 61

Query: 64  LMDAHGKCLLTVRRKRPSLHHRWEGYSGERTDGQKPIFSVRRSSIIGRSSVTVEMYEN-P 122
           LMDAHG+CLLT+RRKRPSL  RWEGY GER+DGQKPIF VRRSSIIGR+SVTVE+Y +  
Sbjct: 62  LMDAHGRCLLTLRRKRPSLRRRWEGYLGERSDGQKPIFGVRRSSIIGRNSVTVEVYGDYQ 121

Query: 123 GEEYQIEGNFWQRSCTIFNA-MKESVAEIRRKVDASTQVLLAKDVFLLSVKPGFDGAFAM 181
             EY IEG+F  R+CT+  A  +  VAEIRRKVDAST V+L KDVF L+VKPGFDGAFAM
Sbjct: 122 CSEYLIEGSFGARNCTVVEAETRRKVAEIRRKVDASTNVMLGKDVFSLNVKPGFDGAFAM 181

Query: 182 GLVLVLDQINGDNYVESNGGRVDPVTED 209
           GLVLVLDQI GD+ +E    +V P  ED
Sbjct: 182 GLVLVLDQIYGDDLLEVGEEQVHPSAED 209

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZVI6|LOR8_ARATH Protein LURP-one-related 8 OS=Arabidopsis thaliana GN=At2g38640 PE=2 SV=1

 Score =  119 bits (299), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/177 (43%), Positives = 99/177 (55%), Gaps = 7/177 (3%)

Query: 17  KQETHLTVFKTSLFFQNDGFTVYNCRGELVFRVDSYGPDTRDKDEHVLMDAHGKCLLTVR 76
           K    LTV+K SL F  DGFTVYN  GELVFRVD+Y    R  D  VLMDA G  LL++R
Sbjct: 20  KAAVVLTVWKKSLLFNCDGFTVYNANGELVFRVDNYMNCPR--DNIVLMDASGFPLLSIR 77

Query: 77  RKRPSLHHRWEGYSGERTDGQKPIFSVRRS-SIIGRSSVTVEMYENPGEEYQIEGNFWQR 135
           RK+ SL   W  Y GE    + PIF+ R++ SII        +       Y+IEG++ QR
Sbjct: 78  RKKLSLGDCWMVYDGETE--RDPIFTARKNVSIISNRKSLAWVSAKKTVLYEIEGSYGQR 135

Query: 136 SCTIFNAM--KESVAEIRRKVDASTQVLLAKDVFLLSVKPGFDGAFAMGLVLVLDQI 190
           SC I +    K+  AEI+RK      V   KDV+ L V+   +   AM L ++LDQ+
Sbjct: 136 SCKILDERRNKKKTAEIKRKETVIGGVAFGKDVYKLIVESEMEPRVAMALTIILDQM 192

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|A0MFL4|LOR17_ARATH Protein LURP-one-related 17 OS=Arabidopsis thaliana GN=At5g41590 PE=2 SV=2

 Score = 95.5 bits (236), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 109/202 (53%), Gaps = 16/202 (7%)

Query: 3   ADQAAVLVADEYIYKQETHLTVFKTSLFFQNDGFTVYNCRGELVFRVDSYGPDTRDKDEH 62
           + ++ V VA   I    T LTV++ SL    +GFTV +  G+L++RVD+Y   TR  +E 
Sbjct: 20  STESTVSVAAADIGGACTTLTVWRKSLLVSCEGFTVIDSNGDLIYRVDNYA-RTR-PEEL 77

Query: 63  VLMDAHGKCLLTVRR-KRPSLHHRWEGYSGERTDGQK-----PIFSVRRS---SIIG-RS 112
           +LMD  G  LL + R K+ +L   W  Y    T G+      P + +R++   +I+  +S
Sbjct: 78  ILMDKDGNSLLLMHRTKKITLVDSWGIYEANDTKGETKIPKCPTWYMRKNLKMNILSTKS 137

Query: 113 SVTVEMYE---NPGEEYQIEGNFWQRSCTIFNA-MKESVAEIRRKVDASTQVLLAKDVFL 168
            +   +Y    +    Y I+G++  +SC I +  + ++V EI+RK   +  V    DVF 
Sbjct: 138 DILAYVYSGSFDKKNSYIIKGSYRCKSCKIVHVPLNKTVVEIKRKEVRTKGVRFGSDVFD 197

Query: 169 LSVKPGFDGAFAMGLVLVLDQI 190
           L V PGFD   AM LVL+LDQ+
Sbjct: 198 LVVNPGFDTGLAMALVLLLDQM 219

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SF24|LOR10_ARATH Protein LURP-one-related 10 OS=Arabidopsis thaliana GN=At3g11740 PE=2 SV=2

 Score = 90.1 bits (222), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 96/188 (51%), Gaps = 7/188 (3%)

Query: 9   LVADEYIYKQETHLTVFKTSLFFQNDGFTVYNCRGELVFRVDSYGPDTRDKDEHVLMDAH 68
           +V+  +       L + +  +   +  F V +  G L+F+V    P     D+ +L+DA+
Sbjct: 3   IVSPNFCAPYPIELGIVRKVMTLTDGNFAVTDVNGNLLFKVKE--PLFSISDKRILLDAY 60

Query: 69  GKCLLTVRRKRPSLHHRWEGYSGERTDGQKPIFSVRRSSIIGRSSVTVEMYENPGEE--- 125
              +LT+R  + SLH RW  Y G+ TD    +++++RSS+I      ++++    +E   
Sbjct: 61  DTPILTLRENKVSLHDRWLVYRGKSTDQSDLLYTLKRSSMIQIMKPKLDIFLAHNKEMKI 120

Query: 126 --YQIEGNFWQRSCTIFNAMKESVAEIRRKVDASTQVLLAKDVFLLSVKPGFDGAFAMGL 183
             + ++G++  RSC ++    +++     K   +  +L+ K  F ++V P  D AF + L
Sbjct: 121 CDFHVKGSWIDRSCVVYAGKSDAIVAQMHKKHTAQSILIGKSNFSVTVYPNVDFAFIVSL 180

Query: 184 VLVLDQIN 191
           +++LD IN
Sbjct: 181 IVILDDIN 188

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LZX1|LOR15_ARATH Protein LURP-one-related 15 OS=Arabidopsis thaliana GN=At5g01750 PE=1 SV=1

 Score = 89.7 bits (221), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 104/191 (54%), Gaps = 8/191 (4%)

Query: 6   AAVLVADEYIYKQETHLTVFKTSLFFQNDGFTVYNCRGELVFRVDSYGPDTRDKDEHVLM 65
             V+V  +Y       + + +  +   +  F + +  G L+F+V    P     D+ VL+
Sbjct: 24  GGVVVDPKYCAPYPIDMAIVRKMMSLTDGNFVITDVNGNLLFKVKE--PVFGLHDKRVLL 81

Query: 66  DAHGKCLLTVRRKRPSLHHRWEGYSGERTDGQKPIFSVRRSSIIG-RSSVTVEMYENPGE 124
           D  G  ++T+R K  S+H RW+ + G  TD +  +++V+RSS++  ++ + V +  N  E
Sbjct: 82  DGSGTPVVTLREKMVSMHDRWQVFRGGSTDQRDLLYTVKRSSMLQLKTKLDVFLGHNKDE 141

Query: 125 ---EYQIEGNFWQRSCTIFNAMKES-VAEIRRKVDASTQVLLAKDVFLLSVKPGFDGAFA 180
              +++++G++ +RSC ++    ++ VA++ RK    + V L KD F ++V P  D AF 
Sbjct: 142 KRCDFRVKGSWLERSCVVYAGESDAIVAQMHRKHTVQS-VFLGKDNFSVTVYPNVDYAFI 200

Query: 181 MGLVLVLDQIN 191
             LV++LD +N
Sbjct: 201 ASLVVILDDVN 211

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|A0MFH4|LOR16_ARATH Protein LURP-one-related 16 OS=Arabidopsis thaliana GN=At5g20640 PE=2 SV=2

 Score = 80.5 bits (197), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 106/204 (51%), Gaps = 17/204 (8%)

Query: 9   LVADEYIYKQETHLTVFKTSLFFQNDGFTVYNCRGELVFRVDSYGPDTRDKDEHVLMDAH 68
           +++  Y  + ET L V +        GF V N +  +VFRVD  G     K + +L +  
Sbjct: 12  VLSRRYSSESETVLVVRRRPPMVNGGGFVVSNSKQVVVFRVDGCGV-LGTKGKLLLRNGD 70

Query: 69  GKCLLTVRR------KRPSLHHRWEGYSGERTDGQKPIFSVRR---SSIIGRSSVTVEMY 119
           G  LL +R+          +H++WEG+  +    ++ +F+++    S ++  SS+ + ++
Sbjct: 71  GNDLLLIRKMGGIVQALNMVHNKWEGFGYDNEGTERLVFTLKDPKDSCLVQNSSIKILVH 130

Query: 120 ENP-------GEEYQIEGNFWQRSCTIFNAMKESVAEIRRKVDASTQVLLAKDVFLLSVK 172
             P           +I+G+F +R+C I ++  +++A++R + +    V   KD++ + VK
Sbjct: 131 GKPPKISSTRNNYVEIKGSFAERACNIMDSDGKAIAKVRIEKEMEEMVGNKKDLYHVIVK 190

Query: 173 PGFDGAFAMGLVLVLDQINGDNYV 196
           P  D +F +GL+ +LD I+G++ +
Sbjct: 191 PNVDQSFIVGLIAILDYIHGESTI 214

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LQ36|LOR1_ARATH Protein LURP-one-related 1 OS=Arabidopsis thaliana GN=At1g33840 PE=2 SV=2

 Score = 80.1 bits (196), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 93/191 (48%), Gaps = 6/191 (3%)

Query: 5   QAAVLVADEYIYKQETHLTVFKTSLFFQNDGFTVYNCRGELVFRVDSYGPDTRDKDEHVL 64
           +A V+V  +Y       L + +  L   +  F + N  G L+F+V    P     ++ +L
Sbjct: 23  KAGVIVDPKYCSLHPVDLAIVRKVLKITDGNFVITNAEGNLLFKVKD--PFFSLHEKRIL 80

Query: 65  MDAHGKCLLTVRRKRPSLHHRWEGYSGERTDGQKPIFSVRRSSIIGRSS----VTVEMYE 120
           MD  G  +LT++ K  ++H RW  + G  T+    +++V+RS+++  ++       +  E
Sbjct: 81  MDGFGTKVLTLKGKIMTMHDRWLVFRGGSTEEVDLLYTVKRSNMVQITTKLDVFLADNIE 140

Query: 121 NPGEEYQIEGNFWQRSCTIFNAMKESVAEIRRKVDASTQVLLAKDVFLLSVKPGFDGAFA 180
               +Y++EG + + SC ++    + +    R+      VL  KD F L+V P  D AF 
Sbjct: 141 QKKCDYRLEGVWLETSCFVYAGDSDIILAQMREKKTMQSVLFGKDNFCLTVNPNVDYAFI 200

Query: 181 MGLVLVLDQIN 191
             L+++L +I 
Sbjct: 201 ASLIVILVEIQ 211

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZUF7|LOR6_ARATH Protein LURP-one-related 6 OS=Arabidopsis thaliana GN=At2g05910 PE=2 SV=1

 Score = 78.2 bits (191), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 98/194 (50%), Gaps = 17/194 (8%)

Query: 9   LVADEYIYKQETHLTVFKTSLFFQNDGFTVYNCRGELVFRVDSYGPDTRDKDEHVLMDAH 68
           +V+  Y    E  + V +        GF V + + ++VF++D  G     K E VL D+ 
Sbjct: 4   VVSKLYCSSMEEVMVVRRRPHVVNGGGFVVTDYKEKIVFKIDGCGV-LGTKGELVLRDSD 62

Query: 69  GKCLLTVRRK-----RPSLHHRWEGYSGERTDGQKPIFSVR--RSSIIGRSSVTVEMYEN 121
           G  LL + +K       S+H++W+GYS +     KP+F++R  + S    +S ++ +   
Sbjct: 63  GNDLLLIHKKGGVVQALSIHNKWKGYSYDYQGSPKPVFTLRDPKHSCFSITS-SIRISVG 121

Query: 122 PGEEY-QIEGNFWQRSCTIFNAMKESVAEIRRKVDASTQVLLAKDVFLLSVKPGFDGAFA 180
           PG  Y  ++G F  R C+I ++    +A+++  + +       +D++ +  KP  D AF 
Sbjct: 122 PGNCYFDVKGYFPDRDCSIVDSKGNVIAQVKEWIGS-------RDIYKVVTKPSVDKAFV 174

Query: 181 MGLVLVLDQINGDN 194
            G++ VLD I G++
Sbjct: 175 FGVIAVLDYIYGES 188

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SH27|LOR4_ARATH Protein LURP-one-related 4 OS=Arabidopsis thaliana GN=At1g63410 PE=3 SV=1

 Score = 77.4 bits (189), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 60/192 (31%), Positives = 94/192 (48%), Gaps = 13/192 (6%)

Query: 5   QAAVLVADEYIYKQETHLTVFKTSLFFQNDGFTVYNCRGELVFRVDSYGPDTRDKDEHVL 64
           QAA+  +  Y+  +    TV+  SL +Q +G TVYN  GE+ +RV++Y  D    + H+ 
Sbjct: 7   QAAI--SSPYMSTERETFTVWMKSLVYQTNGLTVYNSNGEITYRVENY--DKCSNEVHI- 61

Query: 65  MDAHGKCLLTVRRKRPSLHHRWEGY----SGERTDGQKPIFSVRRSSIIGRSSVTVEMYE 120
           MD HG  L T+R+K+  L   W  Y    S   T+  KP   ++RSSI        E+ +
Sbjct: 62  MDLHGNILFTIRKKKLWLFGSWYVYRECGSFTSTEEVKPCARIKRSSI---RDGDWEVRD 118

Query: 121 NPGEEYQIEGNFWQRSCTIFNAMKESVAEIRRKVDASTQVLLAKDVFLLSVKPGFDGAFA 180
              E + I     + +  I +     +A+++ K  +S  + L +DV  L VKP  D +  
Sbjct: 119 ETNEVFWILRFDPKFAFQIIDIHGNIIAQVKPK-QSSNGITLGEDVLTLEVKPRVDHSLV 177

Query: 181 MGLVLVLDQING 192
           + LV V   I G
Sbjct: 178 VTLVTVYGLIKG 189

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	209
255553189	206	GTP binding protein, putative [Ricinus c	0.976	0.990	0.747	7e-85
224054420	201	predicted protein [Populus trichocarpa]	0.956	0.995	0.736	5e-83
224134504	205	predicted protein [Populus trichocarpa]	0.976	0.995	0.721	3e-82
351725395	219	uncharacterized protein LOC100527456 [Gl	0.937	0.894	0.731	8e-82
449436144	206	PREDICTED: protein LURP-one-related 12-l	0.976	0.990	0.697	9e-81
359806430	219	uncharacterized protein LOC100787085 [Gl	1.0	0.954	0.691	3e-80
147838908	207	hypothetical protein VITISV_034997 [Viti	0.971	0.980	0.721	4e-80
225442951	207	PREDICTED: protein LURP-one-related 12 [	0.971	0.980	0.717	3e-79
388501088	227	unknown [Lotus japonicus]	0.899	0.828	0.734	3e-78
18400907	220	protein LURP-one-related 12 [Arabidopsis	0.966	0.918	0.658	3e-75

>gi|255553189|ref|XP_002517637.1| GTP binding protein, putative [Ricinus communis] gi|223543269|gb|EEF44801.1| GTP binding protein, putative [Ricinus communis]

 Score =  318 bits (816), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 154/206 (74%), Positives = 174/206 (84%), Gaps = 2/206 (0%)

Query: 5   QAAVLVADEYIYKQETHLTVFKTSLFFQNDGFTVYNCRGELVFRVDSYG-PDTRDKDEHV 63
           +A ++V   YIY++E HLTV KTSLFF NDGFTVY+CRGELVFRVDSYG PD R+  E V
Sbjct: 2   KAGLIVDSGYIYQEEKHLTVLKTSLFFANDGFTVYDCRGELVFRVDSYGGPDNRETAEVV 61

Query: 64  LMDAHGKCLLTVRRKRPSLHHRWEGYSGERTDGQKPIFSVRRSSIIGRSSVTVEMYENPG 123
           LMDA+G+CLLTVR+KRPSLHHRWEGY GER++GQKP+FSVRRSSIIGR SV VE+Y NPG
Sbjct: 62  LMDANGRCLLTVRKKRPSLHHRWEGYLGERSEGQKPVFSVRRSSIIGRCSVAVEVYGNPG 121

Query: 124 EEYQIEGNFWQRSCTIFNAMKESVAEIRRKVDASTQVLLAKDVFLLSVKPGFDGAFAMGL 183
           EEYQIEG+F  RSCT FNA+KESVAEIRRKVD ST V+L KDVF L +KPGFDGAFAMGL
Sbjct: 122 EEYQIEGSFANRSCTFFNAVKESVAEIRRKVDTSTHVVLGKDVFSLCLKPGFDGAFAMGL 181

Query: 184 VLVLDQINGDNYVESNGGRVDPVTED 209
           VLVLDQINGD+YVE     V P  E+
Sbjct: 182 VLVLDQINGDDYVEDE-SEVSPTAEE 206

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224054420|ref|XP_002298251.1| predicted protein [Populus trichocarpa] gi|222845509|gb|EEE83056.1| predicted protein [Populus trichocarpa]

 Score =  312 bits (800), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 151/205 (73%), Positives = 171/205 (83%), Gaps = 5/205 (2%)

Query: 5   QAAVLVADEYIYKQETHLTVFKTSLFFQNDGFTVYNCRGELVFRVDSYGPDTRDKDEHVL 64
           +  ++V D +IY++E  LTV KTSLFF NDGFTVY+C+GELVFRV+SYGPDTRD+ E VL
Sbjct: 2   KGGLIVDDGFIYEEEKLLTVLKTSLFFANDGFTVYDCKGELVFRVESYGPDTRDQGEIVL 61

Query: 65  MDAHGKCLLTVRRKRPSLHHRWEGYSGERTDGQKPIFSVRRSSIIGRSSVTVEMYENPGE 124
           MDAHG+CLLTVRRKRPSLH RWEGY GE TDG +PIFSVRRSSIIGR SVTVE+Y  PG 
Sbjct: 62  MDAHGRCLLTVRRKRPSLHQRWEGYIGEGTDGNRPIFSVRRSSIIGRCSVTVEVYGKPGA 121

Query: 125 EYQIEGNFWQRSCTIFNAMKESVAEIRRKVDASTQVLLAKDVFLLSVKPGFDGAFAMGLV 184
           EYQIEG+F  RSCTIFNA KES+AEIRRKVDAST VLL KDVF L +KPGFDGAFAMGLV
Sbjct: 122 EYQIEGSFANRSCTIFNAEKESMAEIRRKVDASTNVLLGKDVFSLCLKPGFDGAFAMGLV 181

Query: 185 LVLDQINGDNYVESNGGRVDPVTED 209
           L+LDQI GD+ V+ +     P TED
Sbjct: 182 LILDQITGDDAVDGH-----PTTED 201

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224134504|ref|XP_002327421.1| predicted protein [Populus trichocarpa] gi|118487735|gb|ABK95691.1| unknown [Populus trichocarpa] gi|222835975|gb|EEE74396.1| predicted protein [Populus trichocarpa]

 Score =  310 bits (793), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 148/205 (72%), Positives = 171/205 (83%), Gaps = 1/205 (0%)

Query: 5   QAAVLVADEYIYKQETHLTVFKTSLFFQNDGFTVYNCRGELVFRVDSYGPDTRDKDEHVL 64
           +  ++V D ++Y++E HLTVFKT LFF NDGFTVY+C+GELVFRVDSYGPD+RDK E VL
Sbjct: 2   KGGLVVDDGFVYEEEKHLTVFKTCLFFANDGFTVYDCKGELVFRVDSYGPDSRDKGELVL 61

Query: 65  MDAHGKCLLTVRRKRPSLHHRWEGYSGERTDGQKPIFSVRRSSIIGRSSVTVEMYENPGE 124
           MDAHG+CLLTVRRKRPSLH RWEGY GE TDG  PIFSVRR+S+IGR +VTVE+  NPGE
Sbjct: 62  MDAHGRCLLTVRRKRPSLHQRWEGYIGEGTDGSNPIFSVRRTSMIGRCTVTVEVCGNPGE 121

Query: 125 EYQIEGNFWQRSCTIFNAMKESVAEIRRKVDASTQVLLAKDVFLLSVKPGFDGAFAMGLV 184
           EYQIEG+F  RSCTI N +KE+VAEIRRKVDAST V+L KDV  L +KPGFDGAFAMGLV
Sbjct: 122 EYQIEGSFATRSCTILNTVKEAVAEIRRKVDASTDVVLGKDVLSLCLKPGFDGAFAMGLV 181

Query: 185 LVLDQINGDNYVESNGGRVDPVTED 209
           L+LDQING + VE N  +  P TED
Sbjct: 182 LILDQINGYDSVE-NEVKESPTTED 205

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351725395|ref|NP_001236323.1| uncharacterized protein LOC100527456 [Glycine max] gi|255632396|gb|ACU16548.1| unknown [Glycine max]

 Score =  308 bits (789), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 147/201 (73%), Positives = 168/201 (83%), Gaps = 5/201 (2%)

Query: 14  YIYKQETHLTVFKTSLFFQNDGFTVYNCRGELVFRVDSYGPDTRDKDEHVLMDAHGKCLL 73
           Y++K+E HLTVFKTSLFF  DGFTVY+C+G+LVFRVDSYGPDTRD+DE VLMD +G+CLL
Sbjct: 19  YVFKEEIHLTVFKTSLFFAGDGFTVYDCKGQLVFRVDSYGPDTRDRDELVLMDPNGRCLL 78

Query: 74  TVRRKRPSLHHRWEGYSGERTDGQKPIFSVRRSSIIGRS--SVTVEMYENPGEEYQIEGN 131
           TVRRKRPSLH RWEG+ GER DG KPIFSVRR+SIIGRS  S+TVEMY+NPGEEYQI+G 
Sbjct: 79  TVRRKRPSLHQRWEGFKGERMDGDKPIFSVRRASIIGRSRASLTVEMYDNPGEEYQIDGC 138

Query: 132 FWQRSCTIFNAMKESVAEIRRKVDASTQVLLAKDVFLLSVKPGFDGAFAMGLVLVLDQIN 191
           F QR CT+FN  KESVAEIRRKVD +T V+L K+VF L VKPGFD AFAMG VLVLDQIN
Sbjct: 139 FSQRCCTVFNVTKESVAEIRRKVDPTTSVVLGKEVFSLCVKPGFDAAFAMGFVLVLDQIN 198

Query: 192 GDNYVESNGGR---VDPVTED 209
           G++YV+        V P TED
Sbjct: 199 GEDYVDDRATTEPAVHPATED 219

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449436144|ref|XP_004135854.1| PREDICTED: protein LURP-one-related 12-like [Cucumis sativus] gi|449509285|ref|XP_004163545.1| PREDICTED: protein LURP-one-related 12-like [Cucumis sativus]

 Score =  305 bits (780), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 143/205 (69%), Positives = 172/205 (83%), Gaps = 1/205 (0%)

Query: 5   QAAVLVADEYIYKQETHLTVFKTSLFFQNDGFTVYNCRGELVFRVDSYGPDTRDKDEHVL 64
           Q  V+V + ++Y ++ HLTV KTSLFF  DG+TVY+C+GEL+FRVDSYGPD RDKDE VL
Sbjct: 3   QLPVIVEEAFVYDEDKHLTVMKTSLFFAGDGYTVYDCKGELLFRVDSYGPDARDKDEIVL 62

Query: 65  MDAHGKCLLTVRRKRPSLHHRWEGYSGERTDGQKPIFSVRRSSIIGRSSVTVEMYENPGE 124
           MDA GKCLLTVRRKRPSLHHRWEG+ GERT+GQKPIF+VRRSSIIGRSS+TVE+ ++ G+
Sbjct: 63  MDAQGKCLLTVRRKRPSLHHRWEGFLGERTEGQKPIFNVRRSSIIGRSSMTVEVLKDSGD 122

Query: 125 EYQIEGNFWQRSCTIFNAMKESVAEIRRKVDASTQVLLAKDVFLLSVKPGFDGAFAMGLV 184
           EY IEG F  R CTIF+A KE+VAEI+RKVDA+T V+L KDVF L +KPGFDGAFAMGLV
Sbjct: 123 EYHIEGCFGNRHCTIFDAAKEAVAEIKRKVDATTNVVLGKDVFSLIIKPGFDGAFAMGLV 182

Query: 185 LVLDQINGDNYVESNGGRVDPVTED 209
           LVLDQINGD++ +     +DP  +D
Sbjct: 183 LVLDQINGDSF-DDEDTEMDPTADD 206

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359806430|ref|NP_001240988.1| uncharacterized protein LOC100787085 [Glycine max] gi|255637956|gb|ACU19294.1| unknown [Glycine max]

 Score =  303 bits (776), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 148/214 (69%), Positives = 170/214 (79%), Gaps = 5/214 (2%)

Query: 1   MKADQAAVLVADEYIYKQETHLTVFKTSLFFQNDGFTVYNCRGELVFRVDSYGPDTRDKD 60
           M  +   V V D Y+ K+E HLTV KTSLFF  DGF+VY+C+G+LVFRVDSYGPDTRD D
Sbjct: 6   MAENMKEVEVEDGYVLKEEIHLTVLKTSLFFAGDGFSVYDCKGQLVFRVDSYGPDTRDID 65

Query: 61  EHVLMDAHGKCLLTVRRKRPSLHHRWEGYSGERTDGQKPIFSVRRSSIIGRS--SVTVEM 118
           E VLMD +G+CLLTVRRKRPSLH RWEG+ GER DG KPIFSVRR+SIIGRS  S+TVEM
Sbjct: 66  ELVLMDPNGRCLLTVRRKRPSLHQRWEGFKGERMDGDKPIFSVRRASIIGRSRASLTVEM 125

Query: 119 YENPGEEYQIEGNFWQRSCTIFNAMKESVAEIRRKVDASTQVLLAKDVFLLSVKPGFDGA 178
           Y+NPGEEYQIEG F QR CT+FN  KESVAEI RKVD +T V+L K+VF L VKPGFD A
Sbjct: 126 YDNPGEEYQIEGCFSQRCCTVFNVTKESVAEISRKVDPTTSVVLGKEVFSLCVKPGFDAA 185

Query: 179 FAMGLVLVLDQINGDNYVE---SNGGRVDPVTED 209
           FAMG VLVLDQI+G++YV+   +    V P TED
Sbjct: 186 FAMGFVLVLDQISGEDYVDNIATTEPTVHPATED 219

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147838908|emb|CAN65825.1| hypothetical protein VITISV_034997 [Vitis vinifera]

 Score =  302 bits (774), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 148/205 (72%), Positives = 169/205 (82%), Gaps = 2/205 (0%)

Query: 5   QAAVLVADEYIYKQETHLTVFKTSLFFQNDGFTVYNCRGELVFRVDSYGPDTRDKDEHVL 64
           +A  +V + +IY++E  LTVFKTSLFF  DGFTVY+ +G LVFRVDSY PD RDK E +L
Sbjct: 2   KAGAVVEEGFIYEEEIQLTVFKTSLFFTGDGFTVYDPKGTLVFRVDSYEPDARDKGELIL 61

Query: 65  MDAHGKCLLTVRRKRPSLHHRWEGYSGERTDGQKPIFSVRRSSIIGRSSVTVEMYENPGE 124
           MDA G+CLLTVRRKRPSLH RWEG+ GE  DG+KPIFSV+RSSIIGRS VTVEMY NPGE
Sbjct: 62  MDASGRCLLTVRRKRPSLHQRWEGFLGEGIDGKKPIFSVKRSSIIGRSGVTVEMYSNPGE 121

Query: 125 EYQIEGNFWQRSCTIFNAMKESVAEIRRKVDASTQVLLAKDVFLLSVKPGFDGAFAMGLV 184
           +YQIEG+F  R CTIFNA KESVAEIRRKVDAST V+L KDVF L +KPGFDGAFAMGLV
Sbjct: 122 DYQIEGSFSHRCCTIFNATKESVAEIRRKVDASTHVMLGKDVFTLCLKPGFDGAFAMGLV 181

Query: 185 LVLDQINGDNYVESNGGRVDPVTED 209
           LVLDQI+ D+Y E +G +VDP   D
Sbjct: 182 LVLDQIS-DDY-EDDGLQVDPAAND 204

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225442951|ref|XP_002266582.1| PREDICTED: protein LURP-one-related 12 [Vitis vinifera] gi|297743462|emb|CBI36329.3| unnamed protein product [Vitis vinifera]

 Score =  300 bits (768), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 147/205 (71%), Positives = 168/205 (81%), Gaps = 2/205 (0%)

Query: 5   QAAVLVADEYIYKQETHLTVFKTSLFFQNDGFTVYNCRGELVFRVDSYGPDTRDKDEHVL 64
           +A  +V + +IY++E  LTVFKTSLFF  DGFTVY+ +G LVFRVDSY PD RDK E +L
Sbjct: 2   KAGAVVEEGFIYEEEIQLTVFKTSLFFTGDGFTVYDPKGTLVFRVDSYEPDARDKGELIL 61

Query: 65  MDAHGKCLLTVRRKRPSLHHRWEGYSGERTDGQKPIFSVRRSSIIGRSSVTVEMYENPGE 124
           MDA G+CLLTVRRKRPSLH RWEG+ GE  DG+KPIFSV+RSSIIGRS VTVEMY NPGE
Sbjct: 62  MDASGRCLLTVRRKRPSLHQRWEGFLGEGIDGKKPIFSVKRSSIIGRSGVTVEMYSNPGE 121

Query: 125 EYQIEGNFWQRSCTIFNAMKESVAEIRRKVDASTQVLLAKDVFLLSVKPGFDGAFAMGLV 184
           +YQIEG+F  R CTIFNA KESVAEIRRKVDAST V+L KDVF L +KPGF GAFAMGLV
Sbjct: 122 DYQIEGSFSHRCCTIFNAAKESVAEIRRKVDASTHVMLGKDVFTLCLKPGFGGAFAMGLV 181

Query: 185 LVLDQINGDNYVESNGGRVDPVTED 209
           LVLDQI+ D+Y E +G +VDP   D
Sbjct: 182 LVLDQIS-DDY-EDDGLQVDPAAND 204

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388501088|gb|AFK38610.1| unknown [Lotus japonicus]

 Score =  296 bits (759), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 138/188 (73%), Positives = 160/188 (85%)

Query: 7   AVLVADEYIYKQETHLTVFKTSLFFQNDGFTVYNCRGELVFRVDSYGPDTRDKDEHVLMD 66
           + +V DE++  +E HLTV KTSLFF  DGFTVY+C+GELVFRVDSYGPD+ D DE VLMD
Sbjct: 18  SFVVEDEHVSNEEIHLTVLKTSLFFAGDGFTVYDCKGELVFRVDSYGPDSSDTDELVLMD 77

Query: 67  AHGKCLLTVRRKRPSLHHRWEGYSGERTDGQKPIFSVRRSSIIGRSSVTVEMYENPGEEY 126
            +G+CLLTVRRKRPSLH RWEG+ GER+DG KPIFSV+R+SIIGRSSVTVE+Y +PGEEY
Sbjct: 78  PNGRCLLTVRRKRPSLHQRWEGFKGERSDGDKPIFSVKRASIIGRSSVTVEVYNSPGEEY 137

Query: 127 QIEGNFWQRSCTIFNAMKESVAEIRRKVDASTQVLLAKDVFLLSVKPGFDGAFAMGLVLV 186
           QIEG F QRSCT FN MKESVAEI RKVD +T V+L K+VF LSVKPGFD AFAMG VLV
Sbjct: 138 QIEGCFSQRSCTFFNMMKESVAEIHRKVDPTTGVMLGKEVFSLSVKPGFDAAFAMGFVLV 197

Query: 187 LDQINGDN 194
           LD I+G++
Sbjct: 198 LDHISGES 205

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18400907|ref|NP_566526.1| protein LURP-one-related 12 [Arabidopsis thaliana] gi|75274407|sp|Q9LVZ8.1|LOR12_ARATH RecName: Full=Protein LURP-one-related 12 gi|11994353|dbj|BAB02312.1| unnamed protein product [Arabidopsis thaliana] gi|17380788|gb|AAL36224.1| unknown protein [Arabidopsis thaliana] gi|20259609|gb|AAM14161.1| unknown protein [Arabidopsis thaliana] gi|332642208|gb|AEE75729.1| protein LURP-one-related 12 [Arabidopsis thaliana]

 Score =  286 bits (732), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 133/202 (65%), Positives = 165/202 (81%)

Query: 8   VLVADEYIYKQETHLTVFKTSLFFQNDGFTVYNCRGELVFRVDSYGPDTRDKDEHVLMDA 67
           ++V   Y+Y+++  LTV KTSLF+  DGF  Y+CRG+++FRVDSYGPDTRD DE VLMDA
Sbjct: 19  IVVDKAYLYQEDKPLTVCKTSLFYTGDGFAAYDCRGDIIFRVDSYGPDTRDNDEIVLMDA 78

Query: 68  HGKCLLTVRRKRPSLHHRWEGYSGERTDGQKPIFSVRRSSIIGRSSVTVEMYENPGEEYQ 127
            GKCLLTV+RKRP+LH RWEG+ GER++GQKPIFSVRRSSIIGR ++ VE+Y+  GEEY 
Sbjct: 79  TGKCLLTVKRKRPTLHQRWEGFLGERSEGQKPIFSVRRSSIIGRCTMEVEVYDGTGEEYI 138

Query: 128 IEGNFWQRSCTIFNAMKESVAEIRRKVDASTQVLLAKDVFLLSVKPGFDGAFAMGLVLVL 187
           I+G+F QRSC I++  K +VAEI+RKVDAST V+L +DVF L +KPGFDGAFAMGLV+VL
Sbjct: 139 IDGDFSQRSCLIYDTKKCTVAEIKRKVDASTNVMLGRDVFTLEIKPGFDGAFAMGLVVVL 198

Query: 188 DQINGDNYVESNGGRVDPVTED 209
           DQINGD+ VE    +V P  ED
Sbjct: 199 DQINGDDPVEIGDEQVHPFVED 220

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	209
TAIR|locus:2093242	220	AT3G15810 "AT3G15810" [Arabido	0.961	0.913	0.599	1.4e-62
TAIR|locus:2016299	210	AT1G80120 "AT1G80120" [Arabido	0.980	0.976	0.610	2.4e-60
TAIR|locus:2064179	196	AT2G38640 "AT2G38640" [Arabido	0.794	0.846	0.409	7.8e-23
TAIR|locus:2160427	221	AT5G41590 "AT5G41590" [Arabido	0.880	0.832	0.34	2.5e-17
TAIR|locus:2181082	217	AT5G01750 "AT5G01750" [Arabido	0.889	0.857	0.263	1.3e-15
TAIR|locus:2081481	194	AT3G11740 "AT3G11740" [Arabido	0.875	0.943	0.244	3.8e-14
TAIR|locus:2091040	230	AT3G14260 "AT3G14260" [Arabido	0.354	0.321	0.355	1.9e-13
TAIR|locus:2064686	191	AT2G05910 "AT2G05910" [Arabido	0.851	0.931	0.253	7.1e-13
TAIR|locus:2180459	215	AT5G20640 "AT5G20640" [Arabido	0.894	0.869	0.254	3.1e-12
TAIR|locus:2197036	217	AT1G53870 "AT1G53870" [Arabido	0.775	0.746	0.273	3.9e-12

TAIR|locus:2093242 AT3G15810 "AT3G15810" [Arabidopsis thaliana (taxid:3702)]

 Score = 639 (230.0 bits), Expect = 1.4e-62, P = 1.4e-62
 Identities = 121/202 (59%), Positives = 151/202 (74%)

Query:     9 LVADE-YIYKQETHLTVFKTSLFFQNDGFTVYNCRGELVFRVDSYGPDTRDKDEHVLMDA 67
             +V D+ Y+Y+++  LTV KTSLF+  DGF  Y+CRG+++FRVDSYGPDTRD DE VLMDA
Sbjct:    19 IVVDKAYLYQEDKPLTVCKTSLFYTGDGFAAYDCRGDIIFRVDSYGPDTRDNDEIVLMDA 78

Query:    68 HGKCLLTVRRKRPSLHHRWEGYSGERTDGQKPXXXXXXXXXXXXXXXXXEMYENPGEEYQ 127
              GKCLLTV+RKRP+LH RWEG+ GER++GQKP                 E+Y+  GEEY 
Sbjct:    79 TGKCLLTVKRKRPTLHQRWEGFLGERSEGQKPIFSVRRSSIIGRCTMEVEVYDGTGEEYI 138

Query:   128 IEGNFWQRSCTIFNAMKESVAEIRRKVDASTQVLLAKDVFLLSVKPGFDGAFAMGLVLVL 187
             I+G+F QRSC I++  K +VAEI+RKVDAST V+L +DVF L +KPGFDGAFAMGLV+VL
Sbjct:   139 IDGDFSQRSCLIYDTKKCTVAEIKRKVDASTNVMLGRDVFTLEIKPGFDGAFAMGLVVVL 198

Query:   188 DQINGDNYVESNGGRVDPVTED 209
             DQINGD+ VE    +V P  ED
Sbjct:   199 DQINGDDPVEIGDEQVHPFVED 220

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2016299 AT1G80120 "AT1G80120" [Arabidopsis thaliana (taxid:3702)]

 Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
 Identities = 127/208 (61%), Positives = 149/208 (71%)

Query:     5 QAAVLVADEYIYKQETHLTVFKTSLFFQNDGFTVYNCRGELVFRVDSYG-PDTRDKDEHV 63
             +  +LV DE+I+ +E  LTV KTSLFF  DGFTVY+C+G LVFRVDSYG P+TRD DE V
Sbjct:     2 KGGLLVDDEFIHGEERSLTVRKTSLFFAGDGFTVYDCKGSLVFRVDSYGGPNTRDTDEVV 61

Query:    64 LMDAHGKCLLTVRRKRPSLHHRWEGYSGERTDGQKPXXXXXXXXXXXXXXXXXEMY-ENP 122
             LMDAHG+CLLT+RRKRPSL  RWEGY GER+DGQKP                 E+Y +  
Sbjct:    62 LMDAHGRCLLTLRRKRPSLRRRWEGYLGERSDGQKPIFGVRRSSIIGRNSVTVEVYGDYQ 121

Query:   123 GEEYQIEGNFWQRSCTIFNA-MKESVAEIRRKVDASTQVLLAKDVFLLSVKPGFDGAFAM 181
               EY IEG+F  R+CT+  A  +  VAEIRRKVDAST V+L KDVF L+VKPGFDGAFAM
Sbjct:   122 CSEYLIEGSFGARNCTVVEAETRRKVAEIRRKVDASTNVMLGKDVFSLNVKPGFDGAFAM 181

Query:   182 GLVLVLDQINGDNYVESNGGRVDPVTED 209
             GLVLVLDQI GD+ +E    +V P  ED
Sbjct:   182 GLVLVLDQIYGDDLLEVGEEQVHPSAED 209

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2064179 AT2G38640 "AT2G38640" [Arabidopsis thaliana (taxid:3702)]

 Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
 Identities = 70/171 (40%), Positives = 89/171 (52%)

Query:    22 LTVFKTSLFFQNDGFTVYNCRGELVFRVDSYGPDTRDKDEHVLMDAHGKCLLTVRRKRPS 81
             LTV+K SL F  DGFTVYN  GELVFRVD+Y    RD    VLMDA G  LL++RRK+ S
Sbjct:    25 LTVWKKSLLFNCDGFTVYNANGELVFRVDNYMNCPRDNI--VLMDASGFPLLSIRRKKLS 82

Query:    82 LHHRWEGYSGERTDGQKPXXXXXXXXXXXXXXXXXEMYENPGEEYQIEGNFWQRSCTIFN 141
             L   W  Y GE T+                      +       Y+IEG++ QRSC I +
Sbjct:    83 LGDCWMVYDGE-TERDPIFTARKNVSIISNRKSLAWVSAKKTVLYEIEGSYGQRSCKILD 141

Query:   142 AM--KESVAEIRRKVDASTQVLLAKDVFLLSVKPGFDGAFAMGLVLVLDQI 190
                 K+  AEI+RK      V   KDV+ L V+   +   AM L ++LDQ+
Sbjct:   142 ERRNKKKTAEIKRKETVIGGVAFGKDVYKLIVESEMEPRVAMALTIILDQM 192

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2160427 AT5G41590 "AT5G41590" [Arabidopsis thaliana (taxid:3702)]

 Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
 Identities = 68/200 (34%), Positives = 98/200 (49%)

Query:     5 QAAVLVADEYIYKQETHLTVFKTSLFFQNDGFTVYNCRGELVFRVDSYGPDTRDKDEHVL 64
             ++ V VA   I    T LTV++ SL    +GFTV +  G+L++RVD+Y   TR  +E +L
Sbjct:    22 ESTVSVAAADIGGACTTLTVWRKSLLVSCEGFTVIDSNGDLIYRVDNYAR-TRP-EELIL 79

Query:    65 MDAHGKCLLTVRR-KRPSLHHRWEGYSGERTDGQK-----PXXXXXXXXXXXXXXXXXEM 118
             MD  G  LL + R K+ +L   W  Y    T G+      P                 ++
Sbjct:    80 MDKDGNSLLLMHRTKKITLVDSWGIYEANDTKGETKIPKCPTWYMRKNLKMNILSTKSDI 139

Query:   119 --YENPGE-----EYQIEGNFWQRSCTIFNA-MKESVAEIRRKVDASTQVLLAKDVFLLS 170
               Y   G       Y I+G++  +SC I +  + ++V EI+RK   +  V    DVF L 
Sbjct:   140 LAYVYSGSFDKKNSYIIKGSYRCKSCKIVHVPLNKTVVEIKRKEVRTKGVRFGSDVFDLV 199

Query:   171 VKPGFDGAFAMGLVLVLDQI 190
             V PGFD   AM LVL+LDQ+
Sbjct:   200 VNPGFDTGLAMALVLLLDQM 219

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2181082 AT5G01750 "AT5G01750" [Arabidopsis thaliana (taxid:3702)]

 Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
 Identities = 52/197 (26%), Positives = 97/197 (49%)

Query:     5 QAAVLVAD-EYIYKQETHLTVFKTSLFFQNDGFTVYNCRGELVFRVDSYGPDTRDKDEHV 63
             QA  +V D +Y       + + +  +   +  F + +  G L+F+V    P     D+ V
Sbjct:    22 QAGGVVVDPKYCAPYPIDMAIVRKMMSLTDGNFVITDVNGNLLFKVKE--PVFGLHDKRV 79

Query:    64 LMDAHGKCLLTVRRKRPSLHHRWEGYSGERTDGQKPXXXXXXXXXXXXXXXXXEMY--EN 121
             L+D  G  ++T+R K  S+H RW+ + G  TD Q+                  +++   N
Sbjct:    80 LLDGSGTPVVTLREKMVSMHDRWQVFRGGSTD-QRDLLYTVKRSSMLQLKTKLDVFLGHN 138

Query:   122 PGE---EYQIEGNFWQRSCTIFNAMKES-VAEIRRKVDASTQVLLAKDVFLLSVKPGFDG 177
               E   +++++G++ +RSC ++    ++ VA++ RK    + V L KD F ++V P  D 
Sbjct:   139 KDEKRCDFRVKGSWLERSCVVYAGESDAIVAQMHRKHTVQS-VFLGKDNFSVTVYPNVDY 197

Query:   178 AFAMGLVLVLDQINGDN 194
             AF   LV++LD +N ++
Sbjct:   198 AFIASLVVILDDVNRED 214

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=IDA

GO:0006569 "tryptophan catabolic process" evidence=RCA

GO:0006995 "cellular response to nitrogen starvation" evidence=RCA

GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA

GO:0030003 "cellular cation homeostasis" evidence=RCA

GO:0070838 "divalent metal ion transport" evidence=RCA

TAIR|locus:2081481 AT3G11740 "AT3G11740" [Arabidopsis thaliana (taxid:3702)]

 Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
 Identities = 47/192 (24%), Positives = 92/192 (47%)

Query:     9 LVADEYIYKQETHLTVFKTSLFFQNDGFTVYNCRGELVFRVDSYGPDTRDKDEHVLMDAH 68
             +V+  +       L + +  +   +  F V +  G L+F+V    P     D+ +L+DA+
Sbjct:     3 IVSPNFCAPYPIELGIVRKVMTLTDGNFAVTDVNGNLLFKVKE--PLFSISDKRILLDAY 60

Query:    69 GKCLLTVRRKRPSLHHRWEGYSGERTDGQKPXXXXXXXXXXXXXXXXXEMYENPGEE--- 125
                +LT+R  + SLH RW  Y G+ TD                     +++    +E   
Sbjct:    61 DTPILTLRENKVSLHDRWLVYRGKSTDQSDLLYTLKRSSMIQIMKPKLDIFLAHNKEMKI 120

Query:   126 --YQIEGNFWQRSCTIFNAMKES-VAEIRRKVDASTQVLLAKDVFLLSVKPGFDGAFAMG 182
               + ++G++  RSC ++    ++ VA++ +K  A + +L+ K  F ++V P  D AF + 
Sbjct:   121 CDFHVKGSWIDRSCVVYAGKSDAIVAQMHKKHTAQS-ILIGKSNFSVTVYPNVDFAFIVS 179

Query:   183 LVLVLDQINGDN 194
             L+++LD IN ++
Sbjct:   180 LIVILDDINRED 191

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2091040 AT3G14260 "AT3G14260" [Arabidopsis thaliana (taxid:3702)]

 Score = 139 (54.0 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
 Identities = 27/76 (35%), Positives = 46/76 (60%)

Query:    14 YIYKQETHLTVFKTSLFFQNDGFTVYNCRGELVFRVDSYGPDTRDKDEHVLMDAHGKCLL 73
             Y+  ++   T++  SL F  +G TV++ +G +++RVD+Y  +++   E  LMD  G  L 
Sbjct:    43 YLTTEQESFTIWMKSLVFNTNGCTVFDSKGNIIYRVDNY--NSKSCREVYLMDLSGHVLF 100

Query:    74 TVRRKRPSLHHRWEGY 89
             T+RR++  L   WEGY
Sbjct:   101 TLRRQKFGLFKTWEGY 116

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2064686 AT2G05910 "AT2G05910" [Arabidopsis thaliana (taxid:3702)]

 Score = 170 (64.9 bits), Expect = 7.1e-13, P = 7.1e-13
 Identities = 49/193 (25%), Positives = 87/193 (45%)

Query:     9 LVADEYIYKQETHLTVFKTSLFFQNDGFTVYNCRGELVFRVDSYGPDTRDKDEHVLMDAH 68
             +V+  Y    E  + V +        GF V + + ++VF++D  G     K E VL D+ 
Sbjct:     4 VVSKLYCSSMEEVMVVRRRPHVVNGGGFVVTDYKEKIVFKIDGCGV-LGTKGELVLRDSD 62

Query:    69 GKCLLTVRRKRP-----SLHHRWEGYSGERTDGQKPXXXXXXXXXX-XXXXXXXEMYENP 122
             G  LL + +K       S+H++W+GYS +     KP                   +   P
Sbjct:    63 GNDLLLIHKKGGVVQALSIHNKWKGYSYDYQGSPKPVFTLRDPKHSCFSITSSIRISVGP 122

Query:   123 GEEY-QIEGNFWQRSCTIFNAMKESVAEIRRKVDASTQVLLAKDVFLLSVKPGFDGAFAM 181
             G  Y  ++G F  R C+I ++    +A+++  + +       +D++ +  KP  D AF  
Sbjct:   123 GNCYFDVKGYFPDRDCSIVDSKGNVIAQVKEWIGS-------RDIYKVVTKPSVDKAFVF 175

Query:   182 GLVLVLDQINGDN 194
             G++ VLD I G++
Sbjct:   176 GVIAVLDYIYGES 188

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2180459 AT5G20640 "AT5G20640" [Arabidopsis thaliana (taxid:3702)]

 Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
 Identities = 52/204 (25%), Positives = 94/204 (46%)

Query:     9 LVADEYIYKQETHLTVFKTSLFFQNDGFTVYNCRGELVFRVDSYGPDTRDKDEHVLMDAH 68
             +++  Y  + ET L V +        GF V N +  +VFRVD  G     K + +L +  
Sbjct:    12 VLSRRYSSESETVLVVRRRPPMVNGGGFVVSNSKQVVVFRVDGCGV-LGTKGKLLLRNGD 70

Query:    69 GKCLLTVRRKRP------SLHHRWEG--YSGERTD-------GQKPXXXXXXXXXXXXXX 113
             G  LL +R+          +H++WEG  Y  E T+         K               
Sbjct:    71 GNDLLLIRKMGGIVQALNMVHNKWEGFGYDNEGTERLVFTLKDPKDSCLVQNSSIKILVH 130

Query:   114 XXXEMYENPGEEY-QIEGNFWQRSCTIFNAMKESVAEIRRKVDASTQVLLAKDVFLLSVK 172
                    +    Y +I+G+F +R+C I ++  +++A++R + +    V   KD++ + VK
Sbjct:   131 GKPPKISSTRNNYVEIKGSFAERACNIMDSDGKAIAKVRIEKEMEEMVGNKKDLYHVIVK 190

Query:   173 PGFDGAFAMGLVLVLDQINGDNYV 196
             P  D +F +GL+ +LD I+G++ +
Sbjct:   191 PNVDQSFIVGLIAILDYIHGESTI 214

GO:0003674 "molecular_function" evidence=ND

TAIR|locus:2197036 AT1G53870 "AT1G53870" [Arabidopsis thaliana (taxid:3702)]

 Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
 Identities = 50/183 (27%), Positives = 88/183 (48%)

Query:    14 YIYKQETHLTVFKTSLFFQNDGFTVYNCRGELVFRVDSYGPDTRD-KDEHVLMDAHGKCL 72
             Y+  ++   T++  SL F + G TV++ +G L++RVD+Y  D++   +E   MD +GK L
Sbjct:    36 YLTTEQERFTIWMKSLVFNSKGCTVFDSKGNLIYRVDNY--DSKSWSNEVYFMDLNGKIL 93

Query:    73 LTVRRKRPSLHHRWEGYSGERTDGQKPXXXXXXXXXXXXXXXXXEMYENPGEEYQIEGNF 132
              T+R+K+      WEGY+   T                        Y+       ++G+ 
Sbjct:    94 FTLRQKKLGFFKSWEGYNSTGT------RFRLRKIFKILPRESSSSYKVVMGSRIVDGD- 146

Query:   133 WQRSC-TIFN-----AMKES----VAEIRRKVDASTQVLLAKDVFLLSVKPGFDGAFAMG 182
              Q+SC  I N     A+K+     +AE++ K+   + + L  DV  + V+P  D +  MG
Sbjct:   147 -QQSCYKIVNRGSVFAIKDGSGRLMAEVKNKLSDISGLDLGDDVLTMMVEPQLDHSLIMG 205

Query:   183 LVL 185
             +V+
Sbjct:   206 IVI 208

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9LVZ8	LOR12_ARATH	No assigned EC number	0.6584	0.9665	0.9181	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_Genewise1_v1.C_440116 SubName- Full=Putative uncharacterized protein; (205 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	209
pfam04525	185	pfam04525, Tub_2, Tubby C 2	2e-61
COG4894	159	COG4894, COG4894, Uncharacterized conserved protei	9e-12

>gnl|CDD|218129 pfam04525, Tub_2, Tubby C 2

 Score =  189 bits (481), Expect = 2e-61
 Identities = 84/188 (44%), Positives = 116/188 (61%), Gaps = 13/188 (6%)

Query: 8   VLVADEYIYKQETHLTVFKTSLFFQNDGFTVYNCRGELVFRVDSYGPDTRDKDEHVLMDA 67
           V+V+ EY+  +   LTV++ SL F  DGFTVY+  G LVFRVD Y       DE VLMD+
Sbjct: 2   VVVSSEYLSPEPEDLTVWRKSLVFNGDGFTVYDSNGNLVFRVDGYA--FGLSDERVLMDS 59

Query: 68  HGKCLLTVRRKRPSLHHRWEGYSGERTDGQKPIFSVRRSSIIG------RSSVT---VEM 118
            G  LLT+RRK+ SLH RWE Y GE T+G+ P+F+VRRSSI+         S     V +
Sbjct: 60  SGNPLLTIRRKKLSLHDRWEVYRGEGTEGKDPLFTVRRSSIVQLKTSSSVFSKRNSNVIV 119

Query: 119 YENPGEEYQIEGNFWQRSCTIFNAMKESVAEIRRKVDASTQVLLAKDVFLLSVKPGFDGA 178
            +    ++ I+G+F  RSC I++   + +AE++R+   S  V L KDV+ ++VKP  D A
Sbjct: 120 DDEKNCDFDIKGSFLDRSCKIYDDSDKLIAEVKRQT--SKGVFLGKDVYTVTVKPEVDYA 177

Query: 179 FAMGLVLV 186
           F M LV+V
Sbjct: 178 FIMALVVV 185

The structure of this family has been solved. It comprises a 12-stranded beta barrel with a central C-terminal alpha helix. This helix is thought to be a transmembrane helix. It is structurally similar to the C-terminal domain of the Tubby protein. In plants it plays a role in defense against pathogens. Length = 185

>gnl|CDD|227231 COG4894, COG4894, Uncharacterized conserved protein [Function unknown]

 Score = 60.6 bits (147), Expect = 9e-12
 Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 19/165 (11%)

Query: 26  KTSLFFQNDGFTVYNCRGELVFRVDSYGPDTRDKDEHVLMDAHGKCLLTVRRKRPSLHHR 85
           K  +F   D F +Y+  GE  F+V+  G      D   + DA GK L+++ +K  SL  R
Sbjct: 11  KQKMFSFGDAFHIYDRDGEEAFKVE--GSFFSIGDTLTITDASGKTLVSIEQKLLSLLPR 68

Query: 86  WEGYSGERTDGQKPIFSVRRSSIIGRSSVTVEMYENPGEEYQIEGNFWQRSCTIFNAMKE 145
           +     E +DG   +  VR+     + + + + +E  G  ++I GN W            
Sbjct: 69  Y-----EISDGGGTVCEVRK-----KVTFSRDKFEIDGLNWEIHGNIWD-----DEFKLT 113

Query: 146 SVAEIRRKVDASTQVLLAKDVFLLSVKPGFDGAFAMGLVLVLDQI 190
               +R +V  S +    +D + L V P  D    + + + LD +
Sbjct: 114 DGENVRAEV--SKKWFSWRDTYHLQVAPDEDALLIIAIAVALDMV 156

Length = 159

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	209
PF04525	187	Tub_2: Tubby C 2; InterPro: IPR007612 This is a fa	100.0
COG4894	159	Uncharacterized conserved protein [Function unknow	100.0
PF03803	221	Scramblase: Scramblase ; InterPro: IPR005552 Scram	99.65
COG4894	159	Uncharacterized conserved protein [Function unknow	98.4
PF04525	187	Tub_2: Tubby C 2; InterPro: IPR007612 This is a fa	97.83
KOG0621	292	consensus Phospholipid scramblase [Cell wall/membr	97.66
PF03803	221	Scramblase: Scramblase ; InterPro: IPR005552 Scram	96.4

>PF04525 Tub_2: Tubby C 2; InterPro: IPR007612 This is a family of plant and bacterial uncharacterised proteins

Probab=100.00  E-value=1e-44  Score=295.61  Aligned_cols=177  Identities=42%  Similarity=0.685  Sum_probs=109.4

Q ss_pred             eEeccCccCCCceEEEEEEEeeeEeCCCeEEEeCCCCEEEEEeccCCCCCCCCeEEEEcCCCCeEEEEEecCCCCCcceE
Q 028431            8 VLVADEYIYKQETHLTVFKTSLFFQNDGFTVYNCRGELVFRVDSYGPDTRDKDEHVLMDAHGKCLLTVRRKRPSLHHRWE   87 (209)
Q Consensus         8 ~~v~~~~~~~~~~~l~v~~k~~~~~~~~f~V~D~~G~~vf~V~g~~~~~s~~~k~~l~D~~G~~L~~i~~k~~s~~~~w~   87 (209)
                      ++|+++||+++|++|+||+|.+++++++|+|+|++|+++|+|+| ++.+++++++.|+|++|+||++|++|.++++++|+
T Consensus         2 ~vv~~~~~~~~~~~l~v~~k~~~~~~~~f~V~D~~G~~vf~V~g-~~~~s~~~~~~l~D~~G~~L~~i~~k~~~l~~~w~   80 (187)
T PF04525_consen    2 VVVDAQYCSPQPVTLTVKKKSLSFSGDDFTVYDENGNVVFRVDG-GKFFSIGKKRTLMDASGNPLFTIRRKLFSLRPTWE   80 (187)
T ss_dssp             -SS-GGGB-SS-EEEEEE----------EEEEETTS-EEEEEE---SCTTBTTEEEEE-TTS-EEEEEE--------EEE
T ss_pred             cEECHHHcCCCceEEEEEEEEeeecCCCEEEEcCCCCEEEEEEE-ecccCCCCEEEEECCCCCEEEEEEeeecccceEEE
Confidence            58999999999999999999888899999999999999999999 23589999999999999999999999999999999


Q ss_pred             EEEcCCCCCCcceEEEEeecccC-cceEEEEeeC--------CCCceEEEEeeecCceEEEEeCCCceEEEEEeeecccc
Q 028431           88 GYSGERTDGQKPIFSVRRSSIIG-RSSVTVEMYE--------NPGEEYQIEGNFWQRSCTIFNAMKESVAEIRRKVDAST  158 (209)
Q Consensus        88 v~~~~~~~~~~~lf~ik~~~~~~-~~~~~v~~~~--------~~~~~~~v~G~~~~~~~~I~~~~g~~VA~V~rk~~~~~  158 (209)
                      +|++++.++++++|+||+++.+. ++++.+|+..        ...++|+|+||||+++|+|++.+|++||+|+||+. .+
T Consensus        81 i~~~~~~~~~~~i~tvkk~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~i~G~~~~~~~~I~~~~g~~VA~i~rk~~-~k  159 (187)
T PF04525_consen   81 IYRGGGSEGKKPIFTVKKKSMLQNKDSFDVFLPPKSNISIDDSEGPDFEIKGNFWDRSFTIYDSGGRVVAEISRKYS-SK  159 (187)
T ss_dssp             EEETT---GGGEEEEEE----------EEEEET--T----------SEEEES-TTTT--EEEECC--EEEEEEE------
T ss_pred             EEECCCCccCceEEEEEEecccCCCcceeEEEecccceeecCCCCceEEEEEEecCcEEEEEEcCCCEEEEEecccc-ee
Confidence            99998776678999999997654 5677777752        24669999999999999999655899999998886 67


Q ss_pred             ceEEeeeeEEEEEeCCCCHHHHHHHHHH
Q 028431          159 QVLLAKDVFLLSVKPGFDGAFAMGLVLV  186 (209)
Q Consensus       159 ~~~~~~dtY~v~V~pgvD~ali~alvv~  186 (209)
                      ..+.|+|+|.|+|+||+|++|++|||||
T Consensus       160 ~~~~~~dty~l~V~pg~D~~lv~alvvi  187 (187)
T PF04525_consen  160 KWFSGRDTYTLTVAPGVDQALVVALVVI  187 (187)
T ss_dssp             -----B-SEEEEE-TTSBHHHHHHHHHH
T ss_pred             eEEecCcEEEEEEcCCCCHHHheeEEeC
Confidence            7788999999999999999999999997

; PDB: 1ZXU_A 2Q4M_A.

>COG4894 Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=3.1e-36  Score=230.69  Aligned_cols=154  Identities=26%  Similarity=0.451  Sum_probs=141.2

Q ss_pred             eEEEEEEEeeeEeCCCeEEEeCCCCEEEEEeccCCCCCCCCeEEEEcCCCCeEEEEEecCCCCCcceEEEEcCCCCCCcc
Q 028431           20 THLTVFKTSLFFQNDGFTVYNCRGELVFRVDSYGPDTRDKDEHVLMDAHGKCLLTVRRKRPSLHHRWEGYSGERTDGQKP   99 (209)
Q Consensus        20 ~~l~v~~k~~~~~~~~f~V~D~~G~~vf~V~g~~~~~s~~~k~~l~D~~G~~L~~i~~k~~s~~~~w~v~~~~~~~~~~~   99 (209)
                      .+|.++|| +++.+++|.|+|.+|+.+|+|+|  ++|++++.+++.|++|.+|.+|++|+++++|+|++-.|+   |  .
T Consensus         6 ~tl~mkQk-~~~~gd~f~I~d~dgE~af~VeG--s~f~i~dtlti~Da~G~~l~~i~~kll~l~~~yeI~d~~---g--~   77 (159)
T COG4894           6 ITLFMKQK-MFSFGDAFHIYDRDGEEAFKVEG--SFFSIGDTLTITDASGKTLVSIEQKLLSLLPRYEISDGG---G--T   77 (159)
T ss_pred             HhHhhhhh-hhhcccceEEECCCCcEEEEEee--eEEeeCceEEEEecCCCChHHHHHHHhhccceeEEEcCC---C--C
Confidence            36788999 77889999999999999999999  889999999999999999999999999999999997765   3  4


Q ss_pred             eEEEEeecccCcceEEEEeeCCCCceEEEEeeecCceEEEEeCCCceEEEEEeeeccccceEEeeeeEEEEEeCCCCHHH
Q 028431          100 IFSVRRSSIIGRSSVTVEMYENPGEEYQIEGNFWQRSCTIFNAMKESVAEIRRKVDASTQVLLAKDVFLLSVKPGFDGAF  179 (209)
Q Consensus       100 lf~ik~~~~~~~~~~~v~~~~~~~~~~~v~G~~~~~~~~I~~~~g~~VA~V~rk~~~~~~~~~~~dtY~v~V~pgvD~al  179 (209)
                      +|.++|+..|+|+++++     .+.+|+++||+|+.+|++.+| ++++|+|+|||      ++|+|||+|+|+|+.|..+
T Consensus        78 ~~~vrKK~tf~Rdk~e~-----d~~~~eihGNi~d~efkl~dg-~~~~aeVsKkw------f~~rdTY~l~vapde~a~l  145 (159)
T COG4894          78 VCEVRKKVTFSRDKFEI-----DGLNWEIHGNIWDDEFKLTDG-ENVRAEVSKKW------FSWRDTYHLQVAPDEDALL  145 (159)
T ss_pred             EEEEEEEEEEEeeeEEE-----cCCCeEEecceeceEEEEecC-Cceehhheeee------EeccceEEEEEcCchhhHH
Confidence            99999998887888877     356799999999999999999 68999999999      5799999999999999999


Q ss_pred             HHHHHHHHhhhhcC
Q 028431          180 AMGLVLVLDQINGD  193 (209)
Q Consensus       180 i~alvv~lD~i~~~  193 (209)
                      |+++|||+|++.++
T Consensus       146 ii~i~VaLD~v~~~  159 (159)
T COG4894         146 IIAIAVALDMVLYN  159 (159)
T ss_pred             HHHHHHHHHHHhcC
Confidence            99999999999764

>PF03803 Scramblase: Scramblase ; InterPro: IPR005552 Scramblase is palmitoylated and contains a potential protein kinase C phosphorylation site

Probab=99.65  E-value=3.5e-14  Score=118.25  Aligned_cols=174  Identities=17%  Similarity=0.209  Sum_probs=130.0

Q ss_pred             ccCCCceEEEEEEEeeeE-------eCCCeEEEeCCCCEEEEEeccCCC-----C--CCCCeEEEEcCCCCeEEEEEecC
Q 028431           14 YIYKQETHLTVFKTSLFF-------QNDGFTVYNCRGELVFRVDSYGPD-----T--RDKDEHVLMDAHGKCLLTVRRKR   79 (209)
Q Consensus        14 ~~~~~~~~l~v~~k~~~~-------~~~~f~V~D~~G~~vf~V~g~~~~-----~--s~~~k~~l~D~~G~~L~~i~~k~   79 (209)
                      |.+.-. .+.|+|+.-..       ..+.|.|+|.+|+.+|.+.-....     +  ..+-+..++|..|+++++++|..
T Consensus        17 ~L~~~~-~l~I~Q~~e~~e~~~~~e~~N~Y~I~n~~g~~i~~~~E~s~~~~R~~~~~~R~f~~~i~D~~g~~vl~i~Rp~   95 (221)
T PF03803_consen   17 YLAGLD-QLLIKQQIEPLEIFTGFETPNRYDIKNPNGQQIYYAVEESDCCSRQCCGSHRPFKMHIYDNYGREVLTIERPF   95 (221)
T ss_pred             HHhCCC-EEEEEEEEEEeceecccccCceEEEECCCCCEEEEEEEeCcceeeeecCCCCCEEEEEEecCCCEEEEEEcCC
Confidence            555555 56677774321       357899999999999988754321     1  12345678999999999999875


Q ss_pred             CCC------CcceEEEEcCCCCCCcceEEEEeecccCcceEEEEeeCCCCceEEEEee------ecCceEEEEeCCCceE
Q 028431           80 PSL------HHRWEGYSGERTDGQKPIFSVRRSSIIGRSSVTVEMYENPGEEYQIEGN------FWQRSCTIFNAMKESV  147 (209)
Q Consensus        80 ~s~------~~~w~v~~~~~~~~~~~lf~ik~~~~~~~~~~~v~~~~~~~~~~~v~G~------~~~~~~~I~~~~g~~V  147 (209)
                      -..      ..+.+|+.+.   | +++.+|++++.+.+++++|+-+++ ..-+.|+|.      +.+..|.|++.+|+.|
T Consensus        96 ~c~~C~~~~~~~~~V~~p~---g-~~iG~I~q~~~~~~~~f~I~d~~~-~~~~~I~gp~~~~~~~~~~~F~I~~~~~~~v  170 (221)
T PF03803_consen   96 KCCSCCPCCLQEMEVESPP---G-NLIGSIRQPFSCCRPNFDIFDANG-NPIFTIKGPCCCCSCCCDWEFEIKDPNGQEV  170 (221)
T ss_pred             cceecccccceeEEEecCC---C-cEEEEEEEcCcccceEEEEEECCC-ceEEEEeCCcceeccccceeeeeecccCcEE
Confidence            322      3566664443   3 589999999766668898865543 567888887      4567899999778999


Q ss_pred             EEEEeeecccc-ceEEeeeeEEEEEeCCCCH---HHHHHHHHHHhhhhcC
Q 028431          148 AEIRRKVDAST-QVLLAKDVFLLSVKPGFDG---AFAMGLVLVLDQINGD  193 (209)
Q Consensus       148 A~V~rk~~~~~-~~~~~~dtY~v~V~pgvD~---ali~alvv~lD~i~~~  193 (209)
                      |+|+|+|.+.. ......|.|.|+..+..|.   |+++|.++.||.++-+
T Consensus       171 g~I~k~w~G~~~e~~t~~d~f~i~Fp~~l~~~~Kalll~a~~liD~~~Fe  220 (221)
T PF03803_consen  171 GSITKKWSGFCRELFTDADNFVIEFPPDLDVEQKALLLGAAFLIDYMYFE  220 (221)
T ss_pred             EEEEEecCCcchhhccccceEEEEcCCCCCHHHHHHHHHHHHHhhhhhhc
Confidence            99999997643 3455789999999999876   7899999999998754

Scramblase exhibits Ca2+-activated phospholipid scrambling activity in vitro. There are also possible SH3 and WW binding motifs. Scramblase is involved in the redistribution of phospholipids after cell activation or injury [].

>COG4894 Uncharacterized conserved protein [Function unknown]

Probab=98.40  E-value=5.7e-07  Score=69.74  Aligned_cols=80  Identities=18%  Similarity=0.204  Sum_probs=65.7

Q ss_pred             ceeeEeccCc---cCCCceEEEEEEEeeeEeCCCeEEEeCCCCEEEEEeccCCCCCCCCeEEEEcCCCCeEEEEEecCCC
Q 028431            5 QAAVLVADEY---IYKQETHLTVFKTSLFFQNDGFTVYNCRGELVFRVDSYGPDTRDKDEHVLMDAHGKCLLTVRRKRPS   81 (209)
Q Consensus         5 ~~~~~v~~~~---~~~~~~~l~v~~k~~~~~~~~f~V~D~~G~~vf~V~g~~~~~s~~~k~~l~D~~G~~L~~i~~k~~s   81 (209)
                      |....++..|   -...+.++.|.=+ .+..++.|+|+|+.|.+++.++.  +++++..+..|-|++|+ ++.+++|...
T Consensus        12 Qk~~~~gd~f~I~d~dgE~af~VeGs-~f~i~dtlti~Da~G~~l~~i~~--kll~l~~~yeI~d~~g~-~~~vrKK~tf   87 (159)
T COG4894          12 QKMFSFGDAFHIYDRDGEEAFKVEGS-FFSIGDTLTITDASGKTLVSIEQ--KLLSLLPRYEISDGGGT-VCEVRKKVTF   87 (159)
T ss_pred             hhhhhcccceEEECCCCcEEEEEeee-EEeeCceEEEEecCCCChHHHHH--HHhhccceeEEEcCCCC-EEEEEEEEEE
Confidence            4444555554   3456778888865 55679999999999999999999  78999999999999999 8889998766


Q ss_pred             CCcceEE
Q 028431           82 LHHRWEG   88 (209)
Q Consensus        82 ~~~~w~v   88 (209)
                      ++++|++
T Consensus        88 ~Rdk~e~   94 (159)
T COG4894          88 SRDKFEI   94 (159)
T ss_pred             EeeeEEE
Confidence            6888887

>PF04525 Tub_2: Tubby C 2; InterPro: IPR007612 This is a family of plant and bacterial uncharacterised proteins

Probab=97.83  E-value=0.00015  Score=58.87  Aligned_cols=96  Identities=15%  Similarity=0.209  Sum_probs=47.9

Q ss_pred             CCceEEEEEE-EeeeEeCCCeEEEeCCCCEEEEEeccCCCCCCCCeEEEEcCCCC----eEEEEEec-CCCCCcceEEEE
Q 028431           17 KQETHLTVFK-TSLFFQNDGFTVYNCRGELVFRVDSYGPDTRDKDEHVLMDAHGK----CLLTVRRK-RPSLHHRWEGYS   90 (209)
Q Consensus        17 ~~~~~l~v~~-k~~~~~~~~f~V~D~~G~~vf~V~g~~~~~s~~~k~~l~D~~G~----~L~~i~~k-~~s~~~~w~v~~   90 (209)
                      .....|+|.. + .+..++...++|.+|++++++..  +.+++..+..+.++++.    ++++|+++ .+..++...+|.
T Consensus        36 ~G~~vf~V~g~~-~~s~~~~~~l~D~~G~~L~~i~~--k~~~l~~~w~i~~~~~~~~~~~i~tvkk~~~~~~~~~~~~f~  112 (187)
T PF04525_consen   36 NGNVVFRVDGGK-FFSIGKKRTLMDASGNPLFTIRR--KLFSLRPTWEIYRGGGSEGKKPIFTVKKKSMLQNKDSFDVFL  112 (187)
T ss_dssp             TS-EEEEEE--S-CTTBTTEEEEE-TTS-EEEEEE----------EEEEEETT---GGGEEEEEE----------EEEEE
T ss_pred             CCCEEEEEEEec-ccCCCCEEEEECCCCCEEEEEEe--eecccceEEEEEECCCCccCceEEEEEEecccCCCcceeEEE
Confidence            4566888888 5 56678899999999999999998  67999999999999998    59999998 344455555665


Q ss_pred             cCCC-----CCCcceEEEEeecccCcceEEEE
Q 028431           91 GERT-----DGQKPIFSVRRSSIIGRSSVTVE  117 (209)
Q Consensus        91 ~~~~-----~~~~~lf~ik~~~~~~~~~~~v~  117 (209)
                      +...     +...+-++|+-.+. . .+++|+
T Consensus       113 ~~~~~~~~~~~~~~~~~i~G~~~-~-~~~~I~  142 (187)
T PF04525_consen  113 PPKSNISIDDSEGPDFEIKGNFW-D-RSFTIY  142 (187)
T ss_dssp             T--T----------SEEEES-TT-T-T--EEE
T ss_pred             ecccceeecCCCCceEEEEEEec-C-cEEEEE
Confidence            4211     12234566655432 2 355654

; PDB: 1ZXU_A 2Q4M_A.

>KOG0621 consensus Phospholipid scramblase [Cell wall/membrane/envelope biogenesis]

Probab=97.66  E-value=0.0013  Score=57.27  Aligned_cols=178  Identities=16%  Similarity=0.143  Sum_probs=109.7

Q ss_pred             CccCCCceEEEEEEEee-----eE-eCCCeEEEeCCCCEEEEEeccCC-----C--CCCCCeEEEEcCCCCeEEEEEecC
Q 028431           13 EYIYKQETHLTVFKTSL-----FF-QNDGFTVYNCRGELVFRVDSYGP-----D--TRDKDEHVLMDAHGKCLLTVRRKR   79 (209)
Q Consensus        13 ~~~~~~~~~l~v~~k~~-----~~-~~~~f~V~D~~G~~vf~V~g~~~-----~--~s~~~k~~l~D~~G~~L~~i~~k~   79 (209)
                      +|.+..++.+..++...     -| ..+.|.|.|.+|+.+|.+--...     +  ..-+-...++|.-|+++++++++.
T Consensus        72 ~~L~~~~~~~V~q~~E~~ei~tG~et~NRY~v~~~~g~~v~~~~E~S~~~~Rq~~g~~RpF~~~i~D~~g~eVl~~~R~~  151 (292)
T KOG0621|consen   72 EYLAHLDSLMVVQQIEPLEIFTGFETANRYVVHDMYGQPLYYAMERSNVFARQYLGTHRPFAMRIMDNFGQEVLTCKRPF  151 (292)
T ss_pred             heeecCCceEEEEeeeehhhhccCccCcEEEEEcCCcChhHHHHhhchHHHHHhhccCCcceeEeecccCcEEEEEeccc
Confidence            35566665555544432     13 57889999999999985543211     0  123456788999999999999986


Q ss_pred             CCCCc--------ceEEEEcCCCCCCcceEEEEeecccCcceEEEEeeCCC-CceEEEEee-------ecCceEEEE-eC
Q 028431           80 PSLHH--------RWEGYSGERTDGQKPIFSVRRSSIIGRSSVTVEMYENP-GEEYQIEGN-------FWQRSCTIF-NA  142 (209)
Q Consensus        80 ~s~~~--------~w~v~~~~~~~~~~~lf~ik~~~~~~~~~~~v~~~~~~-~~~~~v~G~-------~~~~~~~I~-~~  142 (209)
                      .+...        ..++-.   ..+ -.+-++........+++.+.  ++. ...|.|+|-       +-+..+.+. ..
T Consensus       152 ~c~~~~c~~~~~~~~~v~~---p~~-~~lG~v~q~~~~~~~~f~i~--~~~~~~v~~v~gp~~~~~~~~~d~~f~~~~~d  225 (292)
T KOG0621|consen  152 PCCSSACALCLAQEIEIQS---PPM-GLLGKVLQTWGCVNPNFHLW--DRDGNLVFLVEGPRCCTFACCDDTVFFPKTTD  225 (292)
T ss_pred             cccccccccccccEEEEEc---CCC-ceEEEEEEeeccccceEEEE--cccceeEEEEEcCceeEEEeecCcceeEEEcC
Confidence            43332        111111   111 13444444432222445442  221 223555554       333444444 44


Q ss_pred             CCceEEEEEeeeccc-cceEEeeeeEEEEEeCCCCH---HHHHHHHHHHhhhhcCCCC
Q 028431          143 MKESVAEIRRKVDAS-TQVLLAKDVFLLSVKPGFDG---AFAMGLVLVLDQINGDNYV  196 (209)
Q Consensus       143 ~g~~VA~V~rk~~~~-~~~~~~~dtY~v~V~pgvD~---ali~alvv~lD~i~~~~~~  196 (209)
                      +|+.|++|.|+|... ...+.+.|+|.|.-.-..|.   ++++|.++-||.+.-+...
T Consensus       226 ~~~~vg~I~k~w~g~~rE~fTDad~f~v~FPldLdvk~kavllga~flID~~~Fe~~~  283 (292)
T KOG0621|consen  226 NGRIVGSISRKWAGLVREAFTDADTFVVHFPLDLDVKLKALLLGSTFLIDYMSFESRG  283 (292)
T ss_pred             CCeEEEEEeecccchhhhheeccceeeEecCCcCCHHHHhhhhhheeeEEEEEEecCC
Confidence            589999999999764 35667889999998877775   7899999999988766653

>PF03803 Scramblase: Scramblase ; InterPro: IPR005552 Scramblase is palmitoylated and contains a potential protein kinase C phosphorylation site

Probab=96.40  E-value=0.011  Score=49.08  Aligned_cols=84  Identities=15%  Similarity=0.158  Sum_probs=60.8

Q ss_pred             CceEEEEEEEeeeEe------CCCeEEEeCCCCEEEEEeccCCCCCCCCeEEEEcCCCCeEEEEEecCCC----CCcceE
Q 028431           18 QETHLTVFKTSLFFQ------NDGFTVYNCRGELVFRVDSYGPDTRDKDEHVLMDAHGKCLLTVRRKRPS----LHHRWE   87 (209)
Q Consensus        18 ~~~~l~v~~k~~~~~------~~~f~V~D~~G~~vf~V~g~~~~~s~~~k~~l~D~~G~~L~~i~~k~~s----~~~~w~   87 (209)
                      ..+.+++.+. ..+.      .....|....|+.+.+|..  +...++.++.|+|++|++++.|+.....    ..-.|.
T Consensus        85 g~~vl~i~Rp-~~c~~C~~~~~~~~~V~~p~g~~iG~I~q--~~~~~~~~f~I~d~~~~~~~~I~gp~~~~~~~~~~~F~  161 (221)
T PF03803_consen   85 GREVLTIERP-FKCCSCCPCCLQEMEVESPPGNLIGSIRQ--PFSCCRPNFDIFDANGNPIFTIKGPCCCCSCCCDWEFE  161 (221)
T ss_pred             CCEEEEEEcC-CcceecccccceeEEEecCCCcEEEEEEE--cCcccceEEEEEECCCceEEEEeCCcceeccccceeee
Confidence            3446666665 3332      2678898999999999998  4456789999999999999999877542    334555


Q ss_pred             EEEcCCCCCCcceEEEEeecc
Q 028431           88 GYSGERTDGQKPIFSVRRSSI  108 (209)
Q Consensus        88 v~~~~~~~~~~~lf~ik~~~~  108 (209)
                      |+..+   | +.+.+|+|++.
T Consensus       162 I~~~~---~-~~vg~I~k~w~  178 (221)
T PF03803_consen  162 IKDPN---G-QEVGSITKKWS  178 (221)
T ss_pred             eeccc---C-cEEEEEEEecC
Confidence            65533   3 57999999863

Scramblase exhibits Ca2+-activated phospholipid scrambling activity in vitro. There are also possible SH3 and WW binding motifs. Scramblase is involved in the redistribution of phospholipids after cell activation or injury [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	209
1zxu_A	217	X-Ray Structure Of Protein From Arabidopsis Thalian		1e-12

>pdb|1ZXU|A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At5g01750 Length = 217

Iteration: 1
 Score = 69.7 bits (169), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/191 (24%), Positives = 86/191 (45%), Gaps = 8/191 (4%)
Query: 6   AAVLVADEYIYKQETHLTVFKTSLFFQNDGFTVYNCRGELVFRVDSYGPDTRDKDEHVLM 65
             V+V  +Y         + +      +  F + +  G L+F+V    P     D+ VL+
Sbjct: 24  GGVVVDPKYCAPYPIDXAIVRKXXSLTDGNFVITDVNGNLLFKVKE--PVFGLHDKRVLL 81
Query: 66  DAHGKCLLTVRRKRPSLHHRWEGYSGERTDGQKPXXXXXXXXXXXXXXXXXEMY--ENPG 123
           D  G  ++T+R K  S H RW+ + G  TD Q+                  +++   N  
Sbjct: 82  DGSGTPVVTLREKXVSXHDRWQVFRGGSTD-QRDLLYTVKRSSXLQLKTKLDVFLGHNKD 140
Query: 124 E---EYQIEGNFWQRSCTIFNAMKESVAEIRRKVDASTQVLLAKDVFLLSVKPGFDGAFA 180
           E   +++++G++ +RSC ++    +++     +      V L KD F ++V P  D AF 
Sbjct: 141 EKRCDFRVKGSWLERSCVVYAGESDAIVAQXHRKHTVQSVFLGKDNFSVTVYPNVDYAFI 200
Query: 181 MGLVLVLDQIN 191
             LV++LD +N
Sbjct: 201 ASLVVILDDVN 211

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	209
1zxu_A	217	AT5G01750 protein; PFAM PF01167, TULP, structural	1e-55

>1zxu_A AT5G01750 protein; PFAM PF01167, TULP, structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 1.70A {Arabidopsis thaliana} SCOP: d.23.1.2 PDB: 2q4m_A Length = 217

 Score =  175 bits (444), Expect = 1e-55
 Identities = 53/194 (27%), Positives = 102/194 (52%), Gaps = 8/194 (4%)

Query: 6   AAVLVADEYIYKQETHLTVFKTSLFFQNDGFTVYNCRGELVFRVDSYGPDTRDKDEHVLM 65
             V+V  +Y       + + +  +   +  F + +  G L+F+V    P     D+ VL+
Sbjct: 24  GGVVVDPKYCAPYPIDMAIVRKMMSLTDGNFVITDVNGNLLFKVK--EPVFGLHDKRVLL 81

Query: 66  DAHGKCLLTVRRKRPSLHHRWEGYSGERTDGQKPIFSVRRSSII-GRSSVTVEMYEN--- 121
           D  G  ++T+R K  S+H RW+ + G  TD +  +++V+RSS++  ++ + V +  N   
Sbjct: 82  DGSGTPVVTLREKMVSMHDRWQVFRGGSTDQRDLLYTVKRSSMLQLKTKLDVFLGHNKDE 141

Query: 122 PGEEYQIEGNFWQRSCTIFNAMK-ESVAEIRRKVDASTQVLLAKDVFLLSVKPGFDGAFA 180
              +++++G++ +RSC ++       VA++ RK      V L KD F ++V P  D AF 
Sbjct: 142 KRCDFRVKGSWLERSCVVYAGESDAIVAQMHRK-HTVQSVFLGKDNFSVTVYPNVDYAFI 200

Query: 181 MGLVLVLDQINGDN 194
             LV++LD +N ++
Sbjct: 201 ASLVVILDDVNRED 214

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	209
1zxu_A	217	AT5G01750 protein; PFAM PF01167, TULP, structural	100.0
1zxu_A	217	AT5G01750 protein; PFAM PF01167, TULP, structural	98.0

>1zxu_A AT5G01750 protein; PFAM PF01167, TULP, structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 1.70A {Arabidopsis thaliana} SCOP: d.23.1.2 PDB: 2q4m_A

Probab=100.00  E-value=1.8e-41  Score=281.17  Aligned_cols=190  Identities=28%  Similarity=0.548  Sum_probs=146.1

Q ss_pred             CCceeeEeccCccCCCceEEEEEEEeeeEeCCCeEEEeCCCCEEEEEeccCCCCCCCCeEEEEcCCCCeEEEEEecCCCC
Q 028431            3 ADQAAVLVADEYIYKQETHLTVFKTSLFFQNDGFTVYNCRGELVFRVDSYGPDTRDKDEHVLMDAHGKCLLTVRRKRPSL   82 (209)
Q Consensus         3 ~~~~~~~v~~~~~~~~~~~l~v~~k~~~~~~~~f~V~D~~G~~vf~V~g~~~~~s~~~k~~l~D~~G~~L~~i~~k~~s~   82 (209)
                      +++..++|+|+||++++++|+||||.+.+++++|+|+|++|+++|+|++  +.++++.++.|+|++|++|++|++|.+++
T Consensus        21 ~~~~~~vv~~~~~~~~~~~l~vkqk~~~~~~~~f~V~D~~G~~vf~V~~--~~~~~~~~~~l~D~~G~~l~~i~rk~~~~   98 (217)
T 1zxu_A           21 PQAGGVVVDPKYCAPYPIDMAIVRKMMSLTDGNFVITDVNGNLLFKVKE--PVFGLHDKRVLLDGSGTPVVTLREKMVSM   98 (217)
T ss_dssp             ---CCCSSCGGGBCSSCEEEEEECC-----CCCEEEEETTSCEEEEEEC--SSTTCCSEEEEECTTSCEEEEEEC-----
T ss_pred             CCCcEEEECccccCCCCcEEEEEEEEeEeeCCCEEEEeCCCCEEEEEEc--cccCCCCEEEEECCCCCEEEEEEcccccc
Confidence            4455667889999999999999999777788899999999999999999  45899999999999999999999999999


Q ss_pred             CcceEEEEcCCCCCCcceEEEEeeccc-CcceEEEEeeCC---CCceEEEEeeecCceEEEEeCC-CceEEEEEeeeccc
Q 028431           83 HHRWEGYSGERTDGQKPIFSVRRSSII-GRSSVTVEMYEN---PGEEYQIEGNFWQRSCTIFNAM-KESVAEIRRKVDAS  157 (209)
Q Consensus        83 ~~~w~v~~~~~~~~~~~lf~ik~~~~~-~~~~~~v~~~~~---~~~~~~v~G~~~~~~~~I~~~~-g~~VA~V~rk~~~~  157 (209)
                      +++|++|.++..++.+++|+||+++.+ .+++++|++.++   +...|+|+|+|++++|+|++++ |++||+|+||| ++
T Consensus        99 ~~~~~v~~~~~~~~~~~i~~vrk~~~~~~~~~~~V~~~~~~~~~~~~~~I~G~~~~~~f~I~~~~~~~~Va~I~kk~-~~  177 (217)
T 1zxu_A           99 HDRWQVFRGGSTDQRDLLYTVKRSSMLQLKTKLDVFLGHNKDEKRCDFRVKGSWLERSCVVYAGESDAIVAQMHRKH-TV  177 (217)
T ss_dssp             -CEEEEEETTCCCGGGEEEEEEC-------CCEEEEETTCCC-CCCSEEEESCTTTTCCEEEETTTCCEEEEEEEC----
T ss_pred             CcEEEEEcCCCCCCCcEEEEEEEeccccCCCeEEEEECCCCCCCceEEEEEEeEeCCEEEEEECCCCEEEEEEEeee-ec
Confidence            999999998765444689999998433 367899987753   2468999999999999999996 69999999997 46


Q ss_pred             cceEEeeeeEEEEEeCCCCHHHHHHHHHHHhhhhcCCC
Q 028431          158 TQVLLAKDVFLLSVKPGFDGAFAMGLVLVLDQINGDNY  195 (209)
Q Consensus       158 ~~~~~~~dtY~v~V~pgvD~ali~alvv~lD~i~~~~~  195 (209)
                      ++++.++|+|.|+|+||+|.+|++|+|++||+++.++.
T Consensus       178 ~~~~~~~D~y~l~V~p~~D~aliialvv~iD~~~~~~~  215 (217)
T 1zxu_A          178 QSVFLGKDNFSVTVYPNVDYAFIASLVVILDDVNREDR  215 (217)
T ss_dssp             -----CBCSEEEEECTTSBHHHHHHHHHHHHHHHC---
T ss_pred             cccccCCcEEEEEECCCCCHHHHHHHHHHHHHhhhhcc
Confidence            77888999999999999999999999999999998764

>1zxu_A AT5G01750 protein; PFAM PF01167, TULP, structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 1.70A {Arabidopsis thaliana} SCOP: d.23.1.2 PDB: 2q4m_A

Probab=98.00  E-value=6.5e-05  Score=61.25  Aligned_cols=110  Identities=18%  Similarity=0.186  Sum_probs=70.4

Q ss_pred             CCceEEEEEEEeeeEeCCCeEEEeCCCCEEEEEeccCCCCCCCCeEEEEcCCCC----eEEEEEecC-CCCCcceEEEEc
Q 028431           17 KQETHLTVFKTSLFFQNDGFTVYNCRGELVFRVDSYGPDTRDKDEHVLMDAHGK----CLLTVRRKR-PSLHHRWEGYSG   91 (209)
Q Consensus        17 ~~~~~l~v~~k~~~~~~~~f~V~D~~G~~vf~V~g~~~~~s~~~k~~l~D~~G~----~L~~i~~k~-~s~~~~w~v~~~   91 (209)
                      .....+.|..+ ....++.+.|+|.+|++++++..  +.+++..+..+.++.+.    +|++|+++. +++++.|+|+.+
T Consensus        60 ~G~~vf~V~~~-~~~~~~~~~l~D~~G~~l~~i~r--k~~~~~~~~~v~~~~~~~~~~~i~~vrk~~~~~~~~~~~V~~~  136 (217)
T 1zxu_A           60 NGNLLFKVKEP-VFGLHDKRVLLDGSGTPVVTLRE--KMVSMHDRWQVFRGGSTDQRDLLYTVKRSSMLQLKTKLDVFLG  136 (217)
T ss_dssp             TSCEEEEEECS-STTCCSEEEEECTTSCEEEEEEC--------CEEEEEETTCCCGGGEEEEEEC-------CCEEEEET
T ss_pred             CCCEEEEEEcc-ccCCCCEEEEECCCCCEEEEEEc--cccccCcEEEEEcCCCCCCCcEEEEEEEeccccCCCeEEEEEC
Confidence            46678888887 44567889999999999999998  55789999999998765    799999873 568899999987


Q ss_pred             CCCCCCcceEEEEeecccCcceEEEEeeCCCCceEEEEee
Q 028431           92 ERTDGQKPIFSVRRSSIIGRSSVTVEMYENPGEEYQIEGN  131 (209)
Q Consensus        92 ~~~~~~~~lf~ik~~~~~~~~~~~v~~~~~~~~~~~v~G~  131 (209)
                      +....+.+.++|+-.+ + ..+++|.-.+++..--+|+-.
T Consensus       137 ~~~~~~~~~~~I~G~~-~-~~~f~I~~~~~~~~Va~I~kk  174 (217)
T 1zxu_A          137 HNKDEKRCDFRVKGSW-L-ERSCVVYAGESDAIVAQMHRK  174 (217)
T ss_dssp             TCCC-CCCSEEEESCT-T-TTCCEEEETTTCCEEEEEEEC
T ss_pred             CCCCCCceEEEEEEeE-e-CCEEEEEECCCCEEEEEEEee
Confidence            5433334567776542 2 346777544322334455544

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	209
d2q4ma1	189	d.23.1.2 (A:24-212) Hypothetical protein At5g01750	1e-58

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	209
d2q4ma1	189	Hypothetical protein At5g01750 {Thale cress (Arabi	100.0
d2q4ma1	189	Hypothetical protein At5g01750 {Thale cress (Arabi	97.62