Citrus Sinensis ID: 028478

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------21
Protein Sequence
MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKVHIFALFCILFIHRWKLLFRFWIVFCKFLKVHAVIM
Secondary Structure (PSIPRED)
cccccccEEEEccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccEEEEEEccccccccccccccccccccccccHHHHHHHHHcccccEEEEccccccccccccccHHHHHHHHHHHHHHHHHHcccccccEEEEccccccccHHHHHHHHHHHccccccEEEEHHHHHHHHHHHHHHHHHccccEEEEEEcc
Secondary Structure Prediction (SSPRO)
HHHccccEEEEEEEHHHHcccccccEccccccccccHHHHHHHHHHHHHHHHHHHccccEEEEEEEcEEEccccccccccccccccccHHHHHHHHHHcccccEEEEcccccccccccEEcEEEHHHHHHHHHHHHHHHcccccEEEEEEEcccccEEHHHHHHHHHHHHcccccEEEEcccccccccHHHHHHHHHHHHHEEEEEEc
Coil and Loop (DISEMBL)
maahgcknlvfsssatvygwpkvvpcteefpleamnpygrtKLFIEEICRDVHRSDSEWKIILLRYfnpvgahpsgkigedprgipnnlmpfvtqvavgrrpeltvfgtdystkdgtgvrdyIHVIDLADGHIaalhklddpkigcevynlgtgkgtSVLEMVAAFEKASGKVHIFALFCILFIHRWKLLFRFWIVFCKFLKVHAVIM
Flexible Loop (DISEMBL)
maahgcknlvfsssatvygwpkVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVgrrpeltvfgtdystkdgtgVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKVHIFALFCILFIHRWKLLFRFWIVFCKFLKVHAVIM
Low Complexity Region (SEG)
MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKVHIFALFCILFIHRWKLLFRFWIVFCKFLKVHAVIM
Disordered region (IsUnstruct)
*****CKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKI****RGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKVHIFALFCILFIHRWKLLFRFWIVFCKFLKVHAVI*
Disordered Region (DISOPRED)
***HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKVHIFALFCILFIHRWKLLFRFWIVFCKFLKVHAVIM
Disordered Region (DISEMBL)
MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKVHIFALFCILFIHRWKLLFRFWIVFCKFLKVHAVIM
Disordered Region (DISPRO)
****GCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKVHIFALFCILFIHRWKLLFRFWIVFCKFLKVHAVIM
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKVHIFALFCILFIHRWKLLFRFWIVFCKFLKVHAVIM
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	208	2.2.26 [Sep-21-2011]
Q9T0A7	350	UDP-glucose 4-epimerase 3	yes	no	0.826	0.491	0.889	3e-88
O65781	350	UDP-glucose 4-epimerase G	N/A	no	0.826	0.491	0.872	2e-87
Q9SN58	351	UDP-glucose 4-epimerase 2	no	no	0.826	0.490	0.889	3e-87
Q42605	351	UDP-glucose 4-epimerase 1	no	no	0.826	0.490	0.751	8e-75
Q43070	350	UDP-glucose 4-epimerase O	N/A	no	0.826	0.491	0.728	2e-74
O65780	354	UDP-glucose 4-epimerase G	N/A	no	0.826	0.485	0.710	6e-71
P55180	339	UDP-glucose 4-epimerase O	yes	no	0.822	0.504	0.674	1e-65
Q8R059	347	UDP-glucose 4-epimerase O	yes	no	0.822	0.492	0.676	1e-64
Q553X7	344	UDP-glucose 4-epimerase O	yes	no	0.826	0.5	0.674	2e-64
Q14376	348	UDP-glucose 4-epimerase O	yes	no	0.822	0.491	0.670	2e-63

>sp|Q9T0A7|GALE3_ARATH UDP-glucose 4-epimerase 3 OS=Arabidopsis thaliana GN=At4g23920 PE=2 SV=1

 Score =  324 bits (830), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 153/172 (88%), Positives = 158/172 (91%)

Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
           MA +GCKNLVFSSSATVYGWPK VPCTEE P+ A NPYGRTKLFIEEICRDVHRSDSEWK
Sbjct: 116 MAQYGCKNLVFSSSATVYGWPKEVPCTEESPISATNPYGRTKLFIEEICRDVHRSDSEWK 175

Query: 61  IILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVR 120
           IILLRYFNPVGAHPSG IGEDP G+PNNLMP+V QVAVGRRP LTVFGTDY TKDGTGVR
Sbjct: 176 IILLRYFNPVGAHPSGYIGEDPLGVPNNLMPYVQQVAVGRRPHLTVFGTDYKTKDGTGVR 235

Query: 121 DYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           DYIHV+DLADGHIAAL KLDD KI CEVYNLGTG GTSVLEMVAAFEKASGK
Sbjct: 236 DYIHVMDLADGHIAALRKLDDLKISCEVYNLGTGNGTSVLEMVAAFEKASGK 287

Arabidopsis thaliana (taxid: 3702)
EC: 5EC: .EC: 1EC: .EC: 3EC: .EC: 2

>sp|O65781|GALE2_CYATE UDP-glucose 4-epimerase GEPI48 OS=Cyamopsis tetragonoloba PE=2 SV=1

 Score =  321 bits (822), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 150/172 (87%), Positives = 158/172 (91%)

Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
           MAAHGCK LVFSSSATVYG PK VPCTEEFPL A NPYGRTKL IEEICRD++R++ EWK
Sbjct: 117 MAAHGCKKLVFSSSATVYGLPKEVPCTEEFPLSAANPYGRTKLIIEEICRDIYRAEQEWK 176

Query: 61  IILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVR 120
           IILLRYFNPVGAHPSG IGEDPRGIPNNLMPFV QVAVGRRP LTVFG DY+T DGTGVR
Sbjct: 177 IILLRYFNPVGAHPSGYIGEDPRGIPNNLMPFVQQVAVGRRPALTVFGNDYTTSDGTGVR 236

Query: 121 DYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           DYIHV+DLADGHIAAL KL+DPKIGCEVYNLGTGKGTSVLEMV AFE+ASGK
Sbjct: 237 DYIHVVDLADGHIAALRKLNDPKIGCEVYNLGTGKGTSVLEMVKAFEQASGK 288

Cyamopsis tetragonoloba (taxid: 3832)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 2

>sp|Q9SN58|GALE2_ARATH UDP-glucose 4-epimerase 2 OS=Arabidopsis thaliana GN=At4g10960 PE=2 SV=3

 Score =  321 bits (822), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 153/172 (88%), Positives = 158/172 (91%)

Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
           MA HGCKNLVFSSSATVYG PK VPCTEEFP+ A+NPYGRTKLFIEEICRDV+ SD EWK
Sbjct: 117 MAQHGCKNLVFSSSATVYGSPKEVPCTEEFPISALNPYGRTKLFIEEICRDVYGSDPEWK 176

Query: 61  IILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVR 120
           IILLRYFNPVGAHPSG IGEDPRGIPNNLMPFV QVAVGRRP LTVFG DY+TKDGTGVR
Sbjct: 177 IILLRYFNPVGAHPSGDIGEDPRGIPNNLMPFVQQVAVGRRPHLTVFGNDYNTKDGTGVR 236

Query: 121 DYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           DYIHVIDLADGHIAAL KL+D KIGCEVYNLGTG GTSVLEMV AFEKASGK
Sbjct: 237 DYIHVIDLADGHIAALRKLEDCKIGCEVYNLGTGNGTSVLEMVDAFEKASGK 288

Arabidopsis thaliana (taxid: 3702)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 2

>sp|Q42605|GALE1_ARATH UDP-glucose 4-epimerase 1 OS=Arabidopsis thaliana GN=At1g12780 PE=1 SV=2

 Score =  279 bits (714), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 130/173 (75%), Positives = 150/173 (86%), Gaps = 1/173 (0%)

Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
           MA + CK +VFSSSATVYG P+ +PC E+F L+AMNPYGRTKLF+EEI RD+ +++ EW+
Sbjct: 121 MAKYNCKMMVFSSSATVYGQPEKIPCMEDFELKAMNPYGRTKLFLEEIARDIQKAEPEWR 180

Query: 61  IILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVR 120
           IILLRYFNPVGAH SG IGEDP+GIPNNLMP++ QVAVGR PEL V+G DY T+DG+ VR
Sbjct: 181 IILLRYFNPVGAHESGSIGEDPKGIPNNLMPYIQQVAVGRLPELNVYGHDYPTEDGSAVR 240

Query: 121 DYIHVIDLADGHIAALHKL-DDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           DYIHV+DLADGHIAAL KL  DPKIGC  YNLGTG+GTSVLEMVAAFEKASGK
Sbjct: 241 DYIHVMDLADGHIAALRKLFADPKIGCTAYNLGTGQGTSVLEMVAAFEKASGK 293

Arabidopsis thaliana (taxid: 3702)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 2

>sp|Q43070|GALE1_PEA UDP-glucose 4-epimerase OS=Pisum sativum GN=GALE PE=2 SV=1

 Score =  278 bits (710), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 126/173 (72%), Positives = 148/173 (85%), Gaps = 1/173 (0%)

Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
           MA H CK +VFSSSATVYG P+ +PC E+F L+AMNPYGRTKLF+EEI RD+ +++ EW+
Sbjct: 120 MAKHNCKKMVFSSSATVYGQPEKIPCVEDFKLQAMNPYGRTKLFLEEIARDIQKAEPEWR 179

Query: 61  IILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVR 120
           I+LLRYFNPVGAH SGK+GEDPRGIPNNLMP++ QVAVGR PEL V+G DY T+DG+ +R
Sbjct: 180 IVLLRYFNPVGAHESGKLGEDPRGIPNNLMPYIQQVAVGRLPELNVYGHDYPTRDGSAIR 239

Query: 121 DYIHVIDLADGHIAALHKL-DDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           DYIHV+DLADGHIAAL KL     IGC  YNLGTG+G+SVLEMVAAFEKASGK
Sbjct: 240 DYIHVMDLADGHIAALRKLFTSENIGCTAYNLGTGRGSSVLEMVAAFEKASGK 292

Pisum sativum (taxid: 3888)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 2

>sp|O65780|GALE1_CYATE UDP-glucose 4-epimerase GEPI42 OS=Cyamopsis tetragonoloba PE=2 SV=1

 Score =  266 bits (681), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 123/173 (71%), Positives = 143/173 (82%), Gaps = 1/173 (0%)

Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
           M+   CK LV SSSATVYG P  +PC E+  L AMNPYGR+KLF+EE+ RD+ R+++EW+
Sbjct: 124 MSKFNCKKLVISSSATVYGQPDQIPCVEDSNLHAMNPYGRSKLFVEEVARDIQRAEAEWR 183

Query: 61  IILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVR 120
           IILLRYFNPVGAH SG+IGEDPRG+PNNLMP++ QVAV R PEL ++G DY TKDGT +R
Sbjct: 184 IILLRYFNPVGAHESGQIGEDPRGLPNNLMPYIQQVAVARLPELNIYGHDYPTKDGTAIR 243

Query: 121 DYIHVIDLADGHIAALHKL-DDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           DYIHV+DLADGHIAAL KL     IGC  YNLGTG+GTSVLEMVAAFEKASGK
Sbjct: 244 DYIHVMDLADGHIAALRKLFTTDNIGCTAYNLGTGRGTSVLEMVAAFEKASGK 296

Cyamopsis tetragonoloba (taxid: 3832)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 2

>sp|P55180|GALE_BACSU UDP-glucose 4-epimerase OS=Bacillus subtilis (strain 168) GN=galE PE=3 SV=1

 Score =  249 bits (635), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 116/172 (67%), Positives = 138/172 (80%), Gaps = 1/172 (0%)

Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
           M  +G K +VFSSSATVYG P+  P TE+FPL A NPYG+TKL +E+I RD+H +D+EW 
Sbjct: 111 MEKYGVKKIVFSSSATVYGVPETSPITEDFPLGATNPYGQTKLMLEQILRDLHTADNEWS 170

Query: 61  IILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVR 120
           + LLRYFNP GAHPSG+IGEDP GIPNNLMP+V QVAVG+  +L+VFG DY TKDGTGVR
Sbjct: 171 VALLRYFNPFGAHPSGRIGEDPNGIPNNLMPYVAQVAVGKLEQLSVFGNDYPTKDGTGVR 230

Query: 121 DYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           DYIHV+DLA+GH+ AL K+ +   G + YNLGTG G SVLEMV AFEK SGK
Sbjct: 231 DYIHVVDLAEGHVKALEKVLN-STGADAYNLGTGTGYSVLEMVKAFEKVSGK 281

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 2

>sp|Q8R059|GALE_MOUSE UDP-glucose 4-epimerase OS=Mus musculus GN=Gale PE=2 SV=1

 Score =  245 bits (626), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 117/173 (67%), Positives = 138/173 (79%), Gaps = 2/173 (1%)

Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEA-MNPYGRTKLFIEEICRDVHRSDSEW 59
           M AHG KNLVFSSSATVYG P+ +P  E  P     NPYG++K FIEE+ RD+ R+D+ W
Sbjct: 118 MRAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCRADTAW 177

Query: 60  KIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGV 119
             +LLRYFNP+GAH SG+IGEDP+GIPNNLMP+V+QVA+GRR  L VFG DY+T+DGTGV
Sbjct: 178 NAVLLRYFNPIGAHASGRIGEDPQGIPNNLMPYVSQVAIGRREALNVFGDDYATEDGTGV 237

Query: 120 RDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           RDYIHV+DLA GHIAAL KL + + GC  YNLGTG G SVL+MV A EKASGK
Sbjct: 238 RDYIHVVDLAKGHIAALKKLKE-QCGCRTYNLGTGTGYSVLQMVQAMEKASGK 289

Catalyzes two distinct but analogous reactions: the epimerization of UDP-glucose to UDP-galactose and the epimerization of UDP-N-acetylglucosamine to UDP-N-acetylgalactosamine.

Mus musculus (taxid: 10090)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 2

>sp|Q553X7|GALE_DICDI UDP-glucose 4-epimerase OS=Dictyostelium discoideum GN=galE PE=1 SV=1

 Score =  245 bits (626), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 116/172 (67%), Positives = 135/172 (78%)

Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
           M  H  K LVFSSSATVYG P  VP TE+FPL A NPYGRTKL++E I +D+  SD EW 
Sbjct: 116 MDKHRVKKLVFSSSATVYGDPHTVPITEDFPLSATNPYGRTKLYVEGILQDLCASDPEWN 175

Query: 61  IILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVR 120
            I+LRYFNPVGAHPSG IGEDP+ IPNNLMP+VTQ A+G+RP L++FG DY+T DGTGVR
Sbjct: 176 CIMLRYFNPVGAHPSGLIGEDPKDIPNNLMPYVTQTAIGKRPILSIFGNDYNTPDGTGVR 235

Query: 121 DYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           D+IHV+DLA GHI+AL  L   K GC  YNLGTG+G SVLEMV A ++AS K
Sbjct: 236 DFIHVVDLAKGHISALSSLHSKKQGCVAYNLGTGRGYSVLEMVGALKQASHK 287

Catalyzes two distinct but analogous reactions: the epimerization of UDP-glucose to UDP-galactose and the epimerization of UDP-N-acetylglucosamine to UDP-N-acetylgalactosamine.

Dictyostelium discoideum (taxid: 44689)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 2

>sp|Q14376|GALE_HUMAN UDP-glucose 4-epimerase OS=Homo sapiens GN=GALE PE=1 SV=2

 Score =  241 bits (616), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 116/173 (67%), Positives = 135/173 (78%), Gaps = 2/173 (1%)

Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEA-MNPYGRTKLFIEEICRDVHRSDSEW 59
           M AHG KNLVFSSSATVYG P+ +P  E  P     NPYG++K FIEE+ RD+ ++D  W
Sbjct: 119 MKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTW 178

Query: 60  KIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGV 119
             +LLRYFNP GAH SG IGEDP+GIPNNLMP+V+QVA+GRR  L VFG DY T+DGTGV
Sbjct: 179 NAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGV 238

Query: 120 RDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           RDYIHV+DLA GHIAAL KL + + GC +YNLGTG G SVL+MV A EKASGK
Sbjct: 239 RDYIHVVDLAKGHIAALRKLKE-QCGCRIYNLGTGTGYSVLQMVQAMEKASGK 290

Catalyzes two distinct but analogous reactions: the epimerization of UDP-glucose to UDP-galactose and the epimerization of UDP-N-acetylglucosamine to UDP-N-acetylgalactosamine.

Homo sapiens (taxid: 9606)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	208
449452214	348	PREDICTED: UDP-glucose 4-epimerase GEPI4	0.826	0.494	0.901	8e-90
37781556	362	UDP-glucose 4-epimerase [Solanum tuberos	0.826	0.475	0.912	1e-89
359473926	574	PREDICTED: UDP-glucose 4-epimerase GEPI4	0.826	0.299	0.906	3e-89
449501827	298	PREDICTED: UDP-glucose 4-epimerase GEPI4	0.826	0.577	0.901	6e-89
297742344	348	unnamed protein product [Vitis vinifera]	0.826	0.494	0.906	2e-88
148613129	248	UDP-glucose 4-epimerase [Catharanthus ro	0.826	0.693	0.912	4e-88
449462531	349	PREDICTED: UDP-glucose 4-epimerase GEPI4	0.826	0.492	0.901	6e-88
449506178	349	PREDICTED: UDP-glucose 4-epimerase GEPI4	0.826	0.492	0.895	3e-87
255537811	297	UDP-glucose 4-epimerase, putative [Ricin	0.826	0.579	0.906	3e-87
224058243	348	predicted protein [Populus trichocarpa]	0.826	0.494	0.895	4e-87

>gi|449452214|ref|XP_004143855.1| PREDICTED: UDP-glucose 4-epimerase GEPI48-like [Cucumis sativus]

 Score =  335 bits (858), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 155/172 (90%), Positives = 163/172 (94%)

Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
           MA+HGCK LVFSSSATVYGWPK VPCTEEFPL A NPYGRTKLFIEEICRD++RSDS+WK
Sbjct: 116 MASHGCKKLVFSSSATVYGWPKTVPCTEEFPLSATNPYGRTKLFIEEICRDIYRSDSDWK 175

Query: 61  IILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVR 120
           IILLRYFNPVGAHPSG IGEDPRGIPNNLMPFV QVAVGRRP LTVFG+DYSTKDGTGVR
Sbjct: 176 IILLRYFNPVGAHPSGDIGEDPRGIPNNLMPFVQQVAVGRRPALTVFGSDYSTKDGTGVR 235

Query: 121 DYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           DYIHV+DLADGHIAAL K+DDP IGCEVYNLGTGKGTSVLEMV+AFEKASGK
Sbjct: 236 DYIHVVDLADGHIAALRKVDDPSIGCEVYNLGTGKGTSVLEMVSAFEKASGK 287

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|37781556|gb|AAP42567.1| UDP-glucose 4-epimerase [Solanum tuberosum]

 Score =  335 bits (858), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 157/172 (91%), Positives = 161/172 (93%)

Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
           MAAHGCK LVFSSSATVYGWPKVVPCTEEFPL A NPYGRTKLFIEEICRDV  +DSEWK
Sbjct: 116 MAAHGCKRLVFSSSATVYGWPKVVPCTEEFPLSAANPYGRTKLFIEEICRDVQNADSEWK 175

Query: 61  IILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVR 120
           IILLRYFNPVGAHPSG+IGEDPRGIPNNLMPFV QVAVGRR ELTV+GTDY TKDGTGVR
Sbjct: 176 IILLRYFNPVGAHPSGRIGEDPRGIPNNLMPFVQQVAVGRRKELTVYGTDYGTKDGTGVR 235

Query: 121 DYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           DYIHV+DLADGHIAAL KL DP IGCEVYNLGTGKGTSVLEMVAAFEKASGK
Sbjct: 236 DYIHVMDLADGHIAALQKLSDPSIGCEVYNLGTGKGTSVLEMVAAFEKASGK 287

Source: Solanum tuberosum

Species: Solanum tuberosum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359473926|ref|XP_002268779.2| PREDICTED: UDP-glucose 4-epimerase GEPI48 [Vitis vinifera]

 Score =  333 bits (853), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 156/172 (90%), Positives = 163/172 (94%)

Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
           MAAHGCK LVFSSSATVYGWPK VPCTEEFPL A NPYGRTKLFIE+ICRD+HRSDSEWK
Sbjct: 342 MAAHGCKKLVFSSSATVYGWPKEVPCTEEFPLCATNPYGRTKLFIEDICRDIHRSDSEWK 401

Query: 61  IILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVR 120
           I+LLRYFNPVGAHPSG IGEDPRGIPNNLMPFV QVAVGRRP LTVFG+DYSTKDGTGVR
Sbjct: 402 IVLLRYFNPVGAHPSGYIGEDPRGIPNNLMPFVQQVAVGRRPALTVFGSDYSTKDGTGVR 461

Query: 121 DYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           DYIHV+DLADGHIAALHKL + +IGCEVYNLGTGKGTSVLEMVAAFEKASGK
Sbjct: 462 DYIHVVDLADGHIAALHKLLNSEIGCEVYNLGTGKGTSVLEMVAAFEKASGK 513

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449501827|ref|XP_004161468.1| PREDICTED: UDP-glucose 4-epimerase GEPI48-like [Cucumis sativus]

 Score =  332 bits (851), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 155/172 (90%), Positives = 163/172 (94%)

Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
           MA+HGCK LVFSSSATVYGWPK VPCTEEFPL A NPYGRTKLFIEEICRD++RSDS+WK
Sbjct: 66  MASHGCKKLVFSSSATVYGWPKTVPCTEEFPLSATNPYGRTKLFIEEICRDIYRSDSDWK 125

Query: 61  IILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVR 120
           IILLRYFNPVGAHPSG IGEDPRGIPNNLMPFV QVAVGRRP LTVFG+DYSTKDGTGVR
Sbjct: 126 IILLRYFNPVGAHPSGDIGEDPRGIPNNLMPFVQQVAVGRRPALTVFGSDYSTKDGTGVR 185

Query: 121 DYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           DYIHV+DLADGHIAAL K+DDP IGCEVYNLGTGKGTSVLEMV+AFEKASGK
Sbjct: 186 DYIHVVDLADGHIAALRKVDDPSIGCEVYNLGTGKGTSVLEMVSAFEKASGK 237

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297742344|emb|CBI34493.3| unnamed protein product [Vitis vinifera]

 Score =  330 bits (847), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 156/172 (90%), Positives = 163/172 (94%)

Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
           MAAHGCK LVFSSSATVYGWPK VPCTEEFPL A NPYGRTKLFIE+ICRD+HRSDSEWK
Sbjct: 116 MAAHGCKKLVFSSSATVYGWPKEVPCTEEFPLCATNPYGRTKLFIEDICRDIHRSDSEWK 175

Query: 61  IILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVR 120
           I+LLRYFNPVGAHPSG IGEDPRGIPNNLMPFV QVAVGRRP LTVFG+DYSTKDGTGVR
Sbjct: 176 IVLLRYFNPVGAHPSGYIGEDPRGIPNNLMPFVQQVAVGRRPALTVFGSDYSTKDGTGVR 235

Query: 121 DYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           DYIHV+DLADGHIAALHKL + +IGCEVYNLGTGKGTSVLEMVAAFEKASGK
Sbjct: 236 DYIHVVDLADGHIAALHKLLNSEIGCEVYNLGTGKGTSVLEMVAAFEKASGK 287

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|148613129|gb|ABQ96189.1| UDP-glucose 4-epimerase [Catharanthus roseus]

 Score =  329 bits (844), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 157/172 (91%), Positives = 160/172 (93%)

Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
           MAAHGCK LVFSSSATVYGWPK VPCTEE P+ A NPYGRTKLFIEEICRDV R+DSEWK
Sbjct: 32  MAAHGCKKLVFSSSATVYGWPKTVPCTEESPICAANPYGRTKLFIEEICRDVQRADSEWK 91

Query: 61  IILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVR 120
           IILLRYFNPVGAHPSG IGEDPRGIPNNLMPFV QVAVGRRP LTVFGTDYSTKDGTGVR
Sbjct: 92  IILLRYFNPVGAHPSGYIGEDPRGIPNNLMPFVQQVAVGRRPALTVFGTDYSTKDGTGVR 151

Query: 121 DYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           DYIHV+DLADGHIAAL KL DP IGCEVYNLGTGKGTSVLEMVAAFEKASGK
Sbjct: 152 DYIHVVDLADGHIAALAKLSDPSIGCEVYNLGTGKGTSVLEMVAAFEKASGK 203

Source: Catharanthus roseus

Species: Catharanthus roseus

Genus: Catharanthus

Family: Apocynaceae

Order: Gentianales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449462531|ref|XP_004148994.1| PREDICTED: UDP-glucose 4-epimerase GEPI48-like [Cucumis sativus]

 Score =  328 bits (842), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 155/172 (90%), Positives = 160/172 (93%)

Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
           MAAHGCK LVFSSSATVYGWPK VPCTEEFPL A NPYGRTKL IEEICRD++RSDSEWK
Sbjct: 118 MAAHGCKKLVFSSSATVYGWPKEVPCTEEFPLSAANPYGRTKLLIEEICRDIYRSDSEWK 177

Query: 61  IILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVR 120
           IILLRYFNPVGAHPSG IGEDPRGIPNNLMPFV QVAVGRRP LTV+GTDYSTKDGTGVR
Sbjct: 178 IILLRYFNPVGAHPSGYIGEDPRGIPNNLMPFVQQVAVGRRPALTVYGTDYSTKDGTGVR 237

Query: 121 DYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           DYIHV+DLADGHIAAL KLD   IGCEVYNLGTGKGTSVLEMV+AFEKASGK
Sbjct: 238 DYIHVVDLADGHIAALRKLDAAGIGCEVYNLGTGKGTSVLEMVSAFEKASGK 289

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449506178|ref|XP_004162675.1| PREDICTED: UDP-glucose 4-epimerase GEPI48-like [Cucumis sativus]

 Score =  327 bits (837), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 154/172 (89%), Positives = 159/172 (92%)

Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
           MAAHGCK LVFSSSA VYGWPK VPCTEEFPL A NPYGRTKL IEEICRD++RSDSEWK
Sbjct: 118 MAAHGCKKLVFSSSAIVYGWPKEVPCTEEFPLSAANPYGRTKLLIEEICRDIYRSDSEWK 177

Query: 61  IILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVR 120
           IILLRYFNPVGAHPSG IGEDPRGIPNNLMPFV QVAVGRRP LTV+GTDYSTKDGTGVR
Sbjct: 178 IILLRYFNPVGAHPSGYIGEDPRGIPNNLMPFVQQVAVGRRPALTVYGTDYSTKDGTGVR 237

Query: 121 DYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           DYIHV+DLADGHIAAL KLD   IGCEVYNLGTGKGTSVLEMV+AFEKASGK
Sbjct: 238 DYIHVVDLADGHIAALRKLDAAGIGCEVYNLGTGKGTSVLEMVSAFEKASGK 289

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255537811|ref|XP_002509972.1| UDP-glucose 4-epimerase, putative [Ricinus communis] gi|223549871|gb|EEF51359.1| UDP-glucose 4-epimerase, putative [Ricinus communis]

 Score =  326 bits (836), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 156/172 (90%), Positives = 160/172 (93%)

Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
           MAA+ CK LVFSSSATVYGWPK VPCTEEFPL A NPYGRTKLFIEEICRD++RSDSEWK
Sbjct: 65  MAAYRCKKLVFSSSATVYGWPKEVPCTEEFPLSAANPYGRTKLFIEEICRDIYRSDSEWK 124

Query: 61  IILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVR 120
           IILLRYFNPVGAHPSG IGEDPRGIPNNLMP+V QVAVGRRP LTVFGTDYSTKDGTGVR
Sbjct: 125 IILLRYFNPVGAHPSGHIGEDPRGIPNNLMPYVQQVAVGRRPHLTVFGTDYSTKDGTGVR 184

Query: 121 DYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           DYIHVIDLADGHIAAL KL D KIGCEVYNLGTGKGTSVLEMV AFEKASGK
Sbjct: 185 DYIHVIDLADGHIAALRKLSDAKIGCEVYNLGTGKGTSVLEMVTAFEKASGK 236

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224058243|ref|XP_002299469.1| predicted protein [Populus trichocarpa] gi|222846727|gb|EEE84274.1| predicted protein [Populus trichocarpa]

 Score =  326 bits (835), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 154/172 (89%), Positives = 159/172 (92%)

Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
           MAAHGCK LVFSSSATVYGWPK VPCTEEFPL A NPYGRTKLFIEEICRD++ SDSEWK
Sbjct: 116 MAAHGCKQLVFSSSATVYGWPKEVPCTEEFPLSAANPYGRTKLFIEEICRDIYSSDSEWK 175

Query: 61  IILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVR 120
           IILLRYFNPVGAHPSG IGEDPRGIPNNLMP+V QVAVGRRP LTVFGTDY TKDGTGVR
Sbjct: 176 IILLRYFNPVGAHPSGYIGEDPRGIPNNLMPYVQQVAVGRRPHLTVFGTDYPTKDGTGVR 235

Query: 121 DYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           DYIHV+DLADGHIAAL KL +  IGCEVYNLGTGKGTSVLEMVAAFEKASGK
Sbjct: 236 DYIHVVDLADGHIAALRKLSEANIGCEVYNLGTGKGTSVLEMVAAFEKASGK 287

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	208
TAIR|locus:2138121	350	UGE2 "UDP-D-glucose/UDP-D-gala	0.826	0.491	0.889	1.2e-81
TAIR|locus:2123466	351	UGE5 "UDP-D-glucose/UDP-D-gala	0.826	0.490	0.889	8.5e-81
TAIR|locus:2014235	348	RHD1 "ROOT HAIR DEFECTIVE 1" [	0.822	0.491	0.818	1.9e-76
TAIR|locus:2015253	351	UGE3 "UDP-D-glucose/UDP-D-gala	0.826	0.490	0.751	4.3e-70
TAIR|locus:2010371	351	UGE1 "UDP-D-glucose/UDP-D-gala	0.826	0.490	0.751	2.4e-69
TIGR_CMR|BA_5700	338	BA_5700 "UDP-glucose 4-epimera	0.822	0.505	0.709	8.8e-63
DICTYBASE|DDB_G0275295	344	galE "UDP-glucose 4-epimerase"	0.826	0.5	0.674	3.1e-60
UNIPROTKB|Q9KLH0	338	VC_A0774 "UDP-glucose 4-epimer	0.822	0.505	0.686	6.4e-60
TIGR_CMR|VC_A0774	338	VC_A0774 "UDP-glucose 4-epimer	0.822	0.505	0.686	6.4e-60
MGI|MGI:1921496	347	Gale "galactose-4-epimerase, U	0.822	0.492	0.676	6.4e-60

TAIR|locus:2138121 UGE2 "UDP-D-glucose/UDP-D-galactose 4-epimerase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 819 (293.4 bits), Expect = 1.2e-81, P = 1.2e-81
 Identities = 153/172 (88%), Positives = 158/172 (91%)

Query:     1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
             MA +GCKNLVFSSSATVYGWPK VPCTEE P+ A NPYGRTKLFIEEICRDVHRSDSEWK
Sbjct:   116 MAQYGCKNLVFSSSATVYGWPKEVPCTEESPISATNPYGRTKLFIEEICRDVHRSDSEWK 175

Query:    61 IILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVR 120
             IILLRYFNPVGAHPSG IGEDP G+PNNLMP+V QVAVGRRP LTVFGTDY TKDGTGVR
Sbjct:   176 IILLRYFNPVGAHPSGYIGEDPLGVPNNLMPYVQQVAVGRRPHLTVFGTDYKTKDGTGVR 235

Query:   121 DYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
             DYIHV+DLADGHIAAL KLDD KI CEVYNLGTG GTSVLEMVAAFEKASGK
Sbjct:   236 DYIHVMDLADGHIAALRKLDDLKISCEVYNLGTGNGTSVLEMVAAFEKASGK 287

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA;IGI;IDA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006012 "galactose metabolic process" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0046983 "protein dimerization activity" evidence=IPI

GO:0042546 "cell wall biogenesis" evidence=IMP

TAIR|locus:2123466 UGE5 "UDP-D-glucose/UDP-D-galactose 4-epimerase 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 811 (290.5 bits), Expect = 8.5e-81, P = 8.5e-81
 Identities = 153/172 (88%), Positives = 158/172 (91%)

Query:     1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
             MA HGCKNLVFSSSATVYG PK VPCTEEFP+ A+NPYGRTKLFIEEICRDV+ SD EWK
Sbjct:   117 MAQHGCKNLVFSSSATVYGSPKEVPCTEEFPISALNPYGRTKLFIEEICRDVYGSDPEWK 176

Query:    61 IILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVR 120
             IILLRYFNPVGAHPSG IGEDPRGIPNNLMPFV QVAVGRRP LTVFG DY+TKDGTGVR
Sbjct:   177 IILLRYFNPVGAHPSGDIGEDPRGIPNNLMPFVQQVAVGRRPHLTVFGNDYNTKDGTGVR 236

Query:   121 DYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
             DYIHVIDLADGHIAAL KL+D KIGCEVYNLGTG GTSVLEMV AFEKASGK
Sbjct:   237 DYIHVIDLADGHIAALRKLEDCKIGCEVYNLGTGNGTSVLEMVDAFEKASGK 288

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA;IDA

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0006012 "galactose metabolic process" evidence=IEA

GO:0016857 "racemase and epimerase activity, acting on carbohydrates and derivatives" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IPI

TAIR|locus:2014235 RHD1 "ROOT HAIR DEFECTIVE 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 770 (276.1 bits), Expect = 1.9e-76, P = 1.9e-76
 Identities = 140/171 (81%), Positives = 152/171 (88%)

Query:     1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
             MAAHGCK LVFSSSATVYGWPK VPCTEE PL  M+PYGRTKLFIE+ICRDV R D EW+
Sbjct:   116 MAAHGCKKLVFSSSATVYGWPKEVPCTEESPLSGMSPYGRTKLFIEDICRDVQRGDPEWR 175

Query:    61 IILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVR 120
             II+LRYFNPVGAHPSG+IGEDP G PNNLMP+V QV VGR P L ++GTDY+TKDGTGVR
Sbjct:   176 IIMLRYFNPVGAHPSGRIGEDPCGTPNNLMPYVQQVVVGRLPNLKIYGTDYTTKDGTGVR 235

Query:   121 DYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASG 171
             DYIHV+DLADGHI AL KLDD +IGCEVYNLGTGKGT+VLEMV AFEKASG
Sbjct:   236 DYIHVVDLADGHICALQKLDDTEIGCEVYNLGTGKGTTVLEMVDAFEKASG 286

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA;IGI;IDA;TAS

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006012 "galactose metabolic process" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0010053 "root epidermal cell differentiation" evidence=IMP

GO:0009832 "plant-type cell wall biogenesis" evidence=TAS

GO:0009969 "xyloglucan biosynthetic process" evidence=IMP

GO:0010246 "rhamnogalacturonan I biosynthetic process" evidence=IMP

GO:0010306 "rhamnogalacturonan II biosynthetic process" evidence=IMP

GO:0005795 "Golgi stack" evidence=IDA

GO:0046983 "protein dimerization activity" evidence=IPI

GO:0042546 "cell wall biogenesis" evidence=IMP

TAIR|locus:2015253 UGE3 "UDP-D-glucose/UDP-D-galactose 4-epimerase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 710 (255.0 bits), Expect = 4.3e-70, P = 4.3e-70
 Identities = 130/173 (75%), Positives = 151/173 (87%)

Query:     1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
             MA + CK +VFSSSATVYG P++VPC E+F L+AMNPYGRTKLF+EEI RD+H ++ EWK
Sbjct:   121 MAKYNCKMMVFSSSATVYGQPEIVPCVEDFELQAMNPYGRTKLFLEEIARDIHAAEPEWK 180

Query:    61 IILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVR 120
             IILLRYFNPVGAH SG+IGEDP+GIPNNLMP++ QVAVGR PEL VFG DY T DG+ VR
Sbjct:   181 IILLRYFNPVGAHESGRIGEDPKGIPNNLMPYIQQVAVGRLPELNVFGHDYPTMDGSAVR 240

Query:   121 DYIHVIDLADGHIAALHKL-DDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
             DYIHV+DLADGH+AAL+KL  D KIGC  YNLGTG+GTSVLEMV++FEKASGK
Sbjct:   241 DYIHVMDLADGHVAALNKLFSDSKIGCTAYNLGTGQGTSVLEMVSSFEKASGK 293

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA;IGI;IDA

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006012 "galactose metabolic process" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IPI

GO:0009555 "pollen development" evidence=IMP

TAIR|locus:2010371 UGE1 "UDP-D-glucose/UDP-D-galactose 4-epimerase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 703 (252.5 bits), Expect = 2.4e-69, P = 2.4e-69
 Identities = 130/173 (75%), Positives = 150/173 (86%)

Query:     1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
             MA + CK +VFSSSATVYG P+ +PC E+F L+AMNPYGRTKLF+EEI RD+ +++ EW+
Sbjct:   121 MAKYNCKMMVFSSSATVYGQPEKIPCMEDFELKAMNPYGRTKLFLEEIARDIQKAEPEWR 180

Query:    61 IILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVR 120
             IILLRYFNPVGAH SG IGEDP+GIPNNLMP++ QVAVGR PEL V+G DY T+DG+ VR
Sbjct:   181 IILLRYFNPVGAHESGSIGEDPKGIPNNLMPYIQQVAVGRLPELNVYGHDYPTEDGSAVR 240

Query:   121 DYIHVIDLADGHIAALHKL-DDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
             DYIHV+DLADGHIAAL KL  DPKIGC  YNLGTG+GTSVLEMVAAFEKASGK
Sbjct:   241 DYIHVMDLADGHIAALRKLFADPKIGCTAYNLGTGQGTSVLEMVAAFEKASGK 293

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA;IGI;IDA

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0006012 "galactose metabolic process" evidence=IEA

GO:0016857 "racemase and epimerase activity, acting on carbohydrates and derivatives" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0005829 "cytosol" evidence=IDA;TAS

GO:0046983 "protein dimerization activity" evidence=IPI

GO:0005886 "plasma membrane" evidence=IDA

GO:0046369 "galactose biosynthetic process" evidence=IDA

TIGR_CMR|BA_5700 BA_5700 "UDP-glucose 4-epimerase" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 641 (230.7 bits), Expect = 8.8e-63, P = 8.8e-63
 Identities = 122/172 (70%), Positives = 135/172 (78%)

Query:     1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
             M  H  KN +FSSSATVYG PK +P TEEFPL   NPYG+TKL IE+I RDV ++D EW 
Sbjct:   111 MQKHNVKNFIFSSSATVYGIPKTLPITEEFPLSVTNPYGQTKLMIEQIMRDVAKADDEWS 170

Query:    61 IILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVR 120
             I LLRYFNP GAH SG+IGEDP GIPNNLMP+VTQVAVG+  EL +FG DY TKDGTGVR
Sbjct:   171 IALLRYFNPFGAHQSGRIGEDPNGIPNNLMPYVTQVAVGKLKELNIFGNDYPTKDGTGVR 230

Query:   121 DYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
             DYIHV+DLA GH+ AL K+   K G E YNLGTGKG SVLEMV AFEK SGK
Sbjct:   231 DYIHVVDLAKGHVKALEKVLKTK-GIEAYNLGTGKGYSVLEMVKAFEKVSGK 281

GO:0003978 "UDP-glucose 4-epimerase activity" evidence=ISS

GO:0006012 "galactose metabolic process" evidence=ISS

DICTYBASE|DDB_G0275295 galE "UDP-glucose 4-epimerase" [Dictyostelium discoideum (taxid:44689)]

 Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
 Identities = 116/172 (67%), Positives = 135/172 (78%)

Query:     1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
             M  H  K LVFSSSATVYG P  VP TE+FPL A NPYGRTKL++E I +D+  SD EW 
Sbjct:   116 MDKHRVKKLVFSSSATVYGDPHTVPITEDFPLSATNPYGRTKLYVEGILQDLCASDPEWN 175

Query:    61 IILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVR 120
              I+LRYFNPVGAHPSG IGEDP+ IPNNLMP+VTQ A+G+RP L++FG DY+T DGTGVR
Sbjct:   176 CIMLRYFNPVGAHPSGLIGEDPKDIPNNLMPYVTQTAIGKRPILSIFGNDYNTPDGTGVR 235

Query:   121 DYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
             D+IHV+DLA GHI+AL  L   K GC  YNLGTG+G SVLEMV A ++AS K
Sbjct:   236 DFIHVVDLAKGHISALSSLHSKKQGCVAYNLGTGRGYSVLEMVGALKQASHK 287

GO:0050662 "coenzyme binding" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0016857 "racemase and epimerase activity, acting on carbohydrates and derivatives" evidence=IEA

GO:0006012 "galactose metabolic process" evidence=IEA

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0016853 "isomerase activity" evidence=IEA

UNIPROTKB|Q9KLH0 VC_A0774 "UDP-glucose 4-epimerase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 614 (221.2 bits), Expect = 6.4e-60, P = 6.4e-60
 Identities = 118/172 (68%), Positives = 138/172 (80%)

Query:     1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
             M   G K+LVFSSSATVYG P  VP TE FP +A NPYGR+KL +EE   D  +++ +W 
Sbjct:   111 MREAGVKSLVFSSSATVYGEPTSVPITESFPTKAANPYGRSKLMVEECLTDFQKANPDWS 170

Query:    61 IILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVR 120
             I LLRYFNPVG+HPSG++GEDP+GIPNNLMPFVTQVAVGRR  L+VFG+DY TKDGTGVR
Sbjct:   171 ITLLRYFNPVGSHPSGELGEDPQGIPNNLMPFVTQVAVGRREYLSVFGSDYPTKDGTGVR 230

Query:   121 DYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
             DYIHV+DLADGHIAAL K+     G  +YNLGTGKG SVL++V AFE ASG+
Sbjct:   231 DYIHVMDLADGHIAALKKVGTCA-GLHIYNLGTGKGYSVLDVVKAFETASGR 281

GO:0003978 "UDP-glucose 4-epimerase activity" evidence=ISS

GO:0006012 "galactose metabolic process" evidence=ISS

TIGR_CMR|VC_A0774 VC_A0774 "UDP-glucose 4-epimerase" [Vibrio cholerae O1 biovar El Tor (taxid:686)]

 Score = 614 (221.2 bits), Expect = 6.4e-60, P = 6.4e-60
 Identities = 118/172 (68%), Positives = 138/172 (80%)

Query:     1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
             M   G K+LVFSSSATVYG P  VP TE FP +A NPYGR+KL +EE   D  +++ +W 
Sbjct:   111 MREAGVKSLVFSSSATVYGEPTSVPITESFPTKAANPYGRSKLMVEECLTDFQKANPDWS 170

Query:    61 IILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVR 120
             I LLRYFNPVG+HPSG++GEDP+GIPNNLMPFVTQVAVGRR  L+VFG+DY TKDGTGVR
Sbjct:   171 ITLLRYFNPVGSHPSGELGEDPQGIPNNLMPFVTQVAVGRREYLSVFGSDYPTKDGTGVR 230

Query:   121 DYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
             DYIHV+DLADGHIAAL K+     G  +YNLGTGKG SVL++V AFE ASG+
Sbjct:   231 DYIHVMDLADGHIAALKKVGTCA-GLHIYNLGTGKGYSVLDVVKAFETASGR 281

GO:0003978 "UDP-glucose 4-epimerase activity" evidence=ISS

GO:0006012 "galactose metabolic process" evidence=ISS

MGI|MGI:1921496 Gale "galactose-4-epimerase, UDP" [Mus musculus (taxid:10090)]

 Score = 614 (221.2 bits), Expect = 6.4e-60, P = 6.4e-60
 Identities = 117/173 (67%), Positives = 138/173 (79%)

Query:     1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAM-NPYGRTKLFIEEICRDVHRSDSEW 59
             M AHG KNLVFSSSATVYG P+ +P  E  P     NPYG++K FIEE+ RD+ R+D+ W
Sbjct:   118 MRAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCRADTAW 177

Query:    60 KIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGV 119
               +LLRYFNP+GAH SG+IGEDP+GIPNNLMP+V+QVA+GRR  L VFG DY+T+DGTGV
Sbjct:   178 NAVLLRYFNPIGAHASGRIGEDPQGIPNNLMPYVSQVAIGRREALNVFGDDYATEDGTGV 237

Query:   120 RDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
             RDYIHV+DLA GHIAAL KL + + GC  YNLGTG G SVL+MV A EKASGK
Sbjct:   238 RDYIHVVDLAKGHIAALKKLKE-QCGCRTYNLGTGTGYSVLQMVQAMEKASGK 289

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0003978 "UDP-glucose 4-epimerase activity" evidence=ISO;IDA

GO:0005575 "cellular_component" evidence=ND

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0006012 "galactose metabolic process" evidence=IDA

GO:0016853 "isomerase activity" evidence=IEA

GO:0016857 "racemase and epimerase activity, acting on carbohydrates and derivatives" evidence=IEA

GO:0019388 "galactose catabolic process" evidence=ISO

GO:0042803 "protein homodimerization activity" evidence=ISO

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9T0A7	GALE3_ARATH	5, ., 1, ., 3, ., 2	0.8895	0.8269	0.4914	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	5.1.3.2	0.914
3rd Layer	5.1.3	0.921

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	208
PLN02240	352	PLN02240, PLN02240, UDP-glucose 4-epimerase	1e-146
cd05247	323	cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase,	1e-107
COG1087	329	COG1087, GalE, UDP-glucose 4-epimerase [Cell envel	3e-94
PRK10675	338	PRK10675, PRK10675, UDP-galactose-4-epimerase; Pro	1e-88
TIGR01179	328	TIGR01179, galE, UDP-glucose-4-epimerase GalE	7e-88
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	2e-30
cd05256	304	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e	2e-25
cd08946	200	cd08946, SDR_e, extended (e) SDRs	1e-24
cd05264	300	cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase	3e-24
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	2e-20
cd05234	305	cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase,	6e-15
cd05248	317	cd05248, ADP_GME_SDR_e, ADP-L-glycero-D-mannohepto	3e-14
TIGR02197	314	TIGR02197, heptose_epim, ADP-L-glycero-D-manno-hep	2e-13
cd05260	316	cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase	1e-10
cd05253	332	cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimera	1e-09
cd05230	305	cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase	5e-08
cd05246	315	cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydra	2e-07
TIGR04180	297	TIGR04180, EDH_00030, NAD dependent epimerase/dehy	2e-07
cd05273	328	cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-	2e-07
cd05257	316	cd05257, Arna_like_SDR_e, Arna decarboxylase_like,	2e-06
PRK15181	348	PRK15181, PRK15181, Vi polysaccharide biosynthesis	3e-06
cd05240	306	cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase	2e-05
TIGR01181	317	TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehyd	3e-05
cd05239	300	cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, exte	4e-05
cd09813	335	cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD	5e-05
COG1088	340	COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cel	6e-05
cd05241	331	cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d	7e-05
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	8e-05
cd05238	305	cd05238, Gne_like_SDR_e, Escherichia coli Gne (a n	8e-05
PLN02166	436	PLN02166, PLN02166, dTDP-glucose 4,6-dehydratase	9e-05
PLN02725	306	PLN02725, PLN02725, GDP-4-keto-6-deoxymannose-3,5-	2e-04
cd05232	303	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase,	2e-04
cd05258	337	cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, e	3e-04
PLN02260	668	PLN02260, PLN02260, probable rhamnose biosynthetic	0.002
PRK11150	308	PRK11150, rfaD, ADP-L-glycero-D-mannoheptose-6-epi	0.003

>gnl|CDD|177883 PLN02240, PLN02240, UDP-glucose 4-epimerase

 Score =  410 bits (1057), Expect = e-146
 Identities = 151/173 (87%), Positives = 157/173 (90%), Gaps = 1/173 (0%)

Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
           MA HGCK LVFSSSATVYG P+ VPCTEEFPL A NPYGRTKLFIEEICRD+H SD EWK
Sbjct: 119 MAKHGCKKLVFSSSATVYGQPEEVPCTEEFPLSATNPYGRTKLFIEEICRDIHASDPEWK 178

Query: 61  IILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVR 120
           IILLRYFNPVGAHPSG+IGEDP+GIPNNLMP+V QVAVGRRPELTVFG DY TKDGTGVR
Sbjct: 179 IILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTGVR 238

Query: 121 DYIHVIDLADGHIAALHKL-DDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           DYIHV+DLADGHIAAL KL  DP IGCE YNLGTGKGTSVLEMVAAFEKASGK
Sbjct: 239 DYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKASGK 291

Length = 352

>gnl|CDD|187558 cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs

 Score =  311 bits (800), Expect = e-107
 Identities = 111/172 (64%), Positives = 132/172 (76%), Gaps = 3/172 (1%)

Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
           M AHG KN VFSSSA VYG P+ VP TEE PL   NPYGRTKL +E+I RD+ ++     
Sbjct: 107 MRAHGVKNFVFSSSAAVYGEPETVPITEEAPLNPTNPYGRTKLMVEQILRDLAKA-PGLN 165

Query: 61  IILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVR 120
            ++LRYFNP GAHPSG IGEDP+ IPNNL+P+V QVA+GRR +L +FG DY T DGT VR
Sbjct: 166 YVILRYFNPAGAHPSGLIGEDPQ-IPNNLIPYVLQVALGRREKLAIFGDDYPTPDGTCVR 224

Query: 121 DYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           DYIHV+DLAD H+ AL KL++   G E+YNLGTG+G SVLE+V AFEK SGK
Sbjct: 225 DYIHVVDLADAHVLALEKLEN-GGGSEIYNLGTGRGYSVLEVVEAFEKVSGK 275

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 323

>gnl|CDD|224012 COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

 Score =  277 bits (711), Expect = 3e-94
 Identities = 80/172 (46%), Positives = 111/172 (64%), Gaps = 3/172 (1%)

Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
           M   G K  +FSS+A VYG P   P +E  PL  +NPYGR+KL  EEI RD  +++  +K
Sbjct: 105 MLQTGVKKFIFSSTAAVYGEPTTSPISETSPLAPINPYGRSKLMSEEILRDAAKANP-FK 163

Query: 61  IILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVR 120
           +++LRYFN  GA P G +G+   G    L+P   + A+G+R +L +FG DY TKDGT +R
Sbjct: 164 VVILRYFNVAGACPDGTLGQRYPGA-TLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIR 222

Query: 121 DYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           DYIHV DLAD H+ AL  L +      ++NLG+G G SVLE++ A +K +G+
Sbjct: 223 DYIHVDDLADAHVLALKYLKEGG-SNNIFNLGSGNGFSVLEVIEAAKKVTGR 273

Length = 329

>gnl|CDD|182639 PRK10675, PRK10675, UDP-galactose-4-epimerase; Provisional

 Score =  263 bits (675), Expect = 1e-88
 Identities = 106/173 (61%), Positives = 131/173 (75%), Gaps = 2/173 (1%)

Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPL-EAMNPYGRTKLFIEEICRDVHRSDSEW 59
           M A   KNL+FSSSATVYG    +P  E FP     +PYG++KL +E+I  D+ ++  +W
Sbjct: 111 MRAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDW 170

Query: 60  KIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGV 119
            I LLRYFNPVGAHPSG +GEDP+GIPNNLMP++ QVAVGRR  L +FG DY T+DGTGV
Sbjct: 171 SIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGV 230

Query: 120 RDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           RDYIHV+DLADGH+AA+ KL + K G  +YNLG G G+SVL++V AF KA GK
Sbjct: 231 RDYIHVMDLADGHVAAMEKLAN-KPGVHIYNLGAGVGSSVLDVVNAFSKACGK 282

Length = 338

>gnl|CDD|213592 TIGR01179, galE, UDP-glucose-4-epimerase GalE

 Score =  261 bits (669), Expect = 7e-88
 Identities = 100/172 (58%), Positives = 126/172 (73%), Gaps = 2/172 (1%)

Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
           M   G K  +FSSSA VYG P  +P +E+ PL  +NPYGR+KL  E+I RD+ ++D +W 
Sbjct: 108 MQQAGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPYGRSKLMSEQILRDLQKADPDWS 167

Query: 61  IILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVR 120
            ++LRYFN  GAHPSG IGEDP GI  +L+P+  QVAVG+R +LT+FGTDY T DGT VR
Sbjct: 168 YVILRYFNVAGAHPSGDIGEDPPGIT-HLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVR 226

Query: 121 DYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           DYIHV+DLAD H+AAL  L +   G  VYNLG G+G SVLE++ AF+K SGK
Sbjct: 227 DYIHVMDLADAHLAALEYLLN-GGGSHVYNLGYGQGFSVLEVIEAFKKVSGK 277

Alternate name: UDPgalactose 4-epimerase This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from This model and described by a separate model [Energy metabolism, Sugars]. Length = 328

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score =  111 bits (280), Expect = 2e-30
 Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 19/152 (12%)

Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
               G K  VF+SS+ VYG     P TE+ PL  ++PY   KL  E +     R+    +
Sbjct: 101 ARRAGVKRFVFASSSEVYGDVADPPITEDTPLGPLSPYAAAKLAAERLVEAYARAY-GLR 159

Query: 61  IILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVR 120
            ++LR FN  G         +P     +++P + +  +  +P + + G      DGT  R
Sbjct: 160 AVILRLFNVYGPG-------NPDPFVTHVIPALIRRILEGKP-ILLLG------DGTQRR 205

Query: 121 DYIHVIDLADGHIAALHKLDDPKIGCEVYNLG 152
           D+++V D+A   + AL   D      E+YN+G
Sbjct: 206 DFLYVDDVARAILLALEHPDGG----EIYNIG 233

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs

 Score = 99.6 bits (249), Expect = 2e-25
 Identities = 56/169 (33%), Positives = 83/169 (49%), Gaps = 20/169 (11%)

Query: 5   GCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILL 64
           G K  V++SS++VYG P  +P  E+ P   ++PY  +K   E  C+ V         + L
Sbjct: 108 GVKRFVYASSSSVYGDPPYLPKDEDHPPNPLSPYAVSKYAGELYCQ-VFARLYGLPTVSL 166

Query: 65  RYFNPVGAHPSGKIGEDPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYI 123
           RYFN  G  P     +DP G    ++P F+ +   G  P  T++G      DG   RD+ 
Sbjct: 167 RYFNVYG--P----RQDPNGGYAAVIPIFIERALKGEPP--TIYG------DGEQTRDFT 212

Query: 124 HVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           +V D+ + ++ A         G EVYN+GTGK TSV E+     +  GK
Sbjct: 213 YVEDVVEANLLAATA----GAGGEVYNIGTGKRTSVNELAELIREILGK 257

This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304

>gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs

 Score = 95.8 bits (239), Expect = 1e-24
 Identities = 49/152 (32%), Positives = 73/152 (48%), Gaps = 19/152 (12%)

Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
               G K  V++SSA+VYG P+ +P  EE P   ++PYG +KL  E + R    S     
Sbjct: 68  ARKAGVKRFVYASSASVYGSPEGLPEEEETPPRPLSPYGVSKLAAEHLLRSYGESY-GLP 126

Query: 61  IILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVR 120
           +++LR  N  G           R   + ++    + A+  +P LTVFG       G   R
Sbjct: 127 VVILRLANVYGPG--------QRPRLDGVVNDFIRRALEGKP-LTVFG------GGNQTR 171

Query: 121 DYIHVIDLADGHIAALHKLDDPKIGCEVYNLG 152
           D+IHV D+    + A   L++P  G  VYN+G
Sbjct: 172 DFIHVDDVVRAILHA---LENPLEGGGVYNIG 200

Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200

>gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs

 Score = 96.6 bits (241), Expect = 3e-24
 Identities = 56/176 (31%), Positives = 90/176 (51%), Gaps = 26/176 (14%)

Query: 1   MAAHGCKNLVF-SSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEW 59
            AA G   ++F SS  TVYG P+ +P +E  P   ++ YG +KL IE+  R +++     
Sbjct: 100 CAAAGIGKIIFASSGGTVYGVPEQLPISESDPTLPISSYGISKLAIEKYLR-LYQYLYGL 158

Query: 60  KIILLRYFNPVGA--HPSGKIGEDPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDG 116
              +LR  NP G    P GK G         ++P  + ++  G    + ++G      DG
Sbjct: 159 DYTVLRISNPYGPGQRPDGKQG---------VIPIALNKILRGEP--IEIWG------DG 201

Query: 117 TGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
             +RDYI++ DL +  +A L      K   EV+N+G+G G S+ E++A  EK +G+
Sbjct: 202 ESIRDYIYIDDLVEALMALLRS----KGLEEVFNIGSGIGYSLAELIAEIEKVTGR 253

This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 86.5 bits (214), Expect = 2e-20
 Identities = 51/175 (29%), Positives = 82/175 (46%), Gaps = 22/175 (12%)

Query: 1   MAAHGCKNLVFSSS-ATVYGWPKVVPCTEE-FPLEAMNPYGRTKLFIEEICRDVHRSDSE 58
             A G K  VF+SS + VYG P  +P  E+  P   +NPYG +KL  E++ R   R    
Sbjct: 103 ARAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARLYG- 161

Query: 59  WKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTG 118
             +++LR FN  G         D   + + ++    +  +   P + + G      DG+ 
Sbjct: 162 LPVVILRPFNVYGPG-------DKPDLSSGVVSAFIRQLLKGEPIIVIGG------DGSQ 208

Query: 119 VRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG-TSVLEMVAAFEKASGK 172
            RD+++V D+AD  + AL   D       V+N+G+G    +V E+  A  +A G 
Sbjct: 209 TRDFVYVDDVADALLLALENPDG-----GVFNIGSGTAEITVRELAEAVAEAVGS 258

Length = 314

>gnl|CDD|187545 cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, subgroup 2, extended (e) SDRs

 Score = 71.2 bits (175), Expect = 6e-15
 Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 25/166 (15%)

Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRD-VHRSDSEW 59
           M A+G K +VF+SS+TVYG  KV+P  E++P   ++ YG +KL  E +     H    + 
Sbjct: 105 MRANGVKRIVFASSSTVYGEAKVIPTPEDYPPLPISVYGASKLAAEALISAYAHLFGFQA 164

Query: 60  KIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRP-ELTVFGTDYSTKDGTG 118
            I   R+ N VG   +  +  D          F+ ++   R P EL V G      DG  
Sbjct: 165 WIF--RFANIVGPRSTHGVIYD----------FINKLK--RNPNELEVLG------DGRQ 204

Query: 119 VRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVA 164
            + Y++V D  D  + A  K      G  ++NLG     SV E+  
Sbjct: 205 RKSYLYVSDCVDAMLLAWEK---STEGVNIFNLGNDDTISVNEIAE 247

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of archaeal and bacterial proteins, and has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187559 cd05248, ADP_GME_SDR_e, ADP-L-glycero-D-mannoheptose 6-epimerase (GME), extended (e) SDRs

 Score = 69.3 bits (170), Expect = 3e-14
 Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 14/166 (8%)

Query: 9   LVFSSSATVYG--WPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRY 66
            +++SSA VYG          E   L  +N YG +KL  ++  R  H  +   +++ LRY
Sbjct: 111 FIYASSAAVYGNGSLGFAEDIETPNLRPLNVYGYSKLLFDQWARR-HGKEVLSQVVGLRY 169

Query: 67  FNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVI 126
           FN  G     K       +  +L     Q+  G + +L  F +     DG  +RD+++V 
Sbjct: 170 FNVYGPREYHK--GRMASVVFHL---FNQIKAGEKVKL--FKSSDGYADGEQLRDFVYVK 222

Query: 127 DLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           D+   ++  L        G  ++N+GTG+  S  ++ +A  KA GK
Sbjct: 223 DVVKVNLFFLEN--PSVSG--IFNVGTGRARSFNDLASATFKALGK 264

This subgroup contains ADP-L-glycero-D-mannoheptose 6-epimerase, an extended SDR, which catalyzes the NAD-dependent interconversion of ADP-D-glycero-D-mannoheptose and ADP-L-glycero-D-mannoheptose. This subgroup has the canonical active site tetrad and NAD(P)-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 317

>gnl|CDD|233775 TIGR02197, heptose_epim, ADP-L-glycero-D-manno-heptose-6-epimerase

 Score = 67.3 bits (165), Expect = 2e-13
 Identities = 51/180 (28%), Positives = 75/180 (41%), Gaps = 30/180 (16%)

Query: 2   AAHGCKNLVFSSSATVYGW---PKVVPCTEEFPLEAMNPYGRTKLFIEEICRD-VHRSDS 57
           A  G    +++SSA  YG            E PL   N YG +K   ++  R  V     
Sbjct: 103 AEKGIP-FIYASSAATYGDGEAGFREGRELERPL---NVYGYSKFLFDQYVRRRVLPEAL 158

Query: 58  EWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFV-----TQVAVGRRPELTVFGTDYS 112
             +++ LRYFN  G          PR      M  V      Q+  G   +L      + 
Sbjct: 159 SAQVVGLRYFNVYG----------PREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGF- 207

Query: 113 TKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
            KDG  +RD+++V D+ D     L  L++   G  ++NLGTG+  S  ++  A  KA GK
Sbjct: 208 -KDGEQLRDFVYVKDVVD---VNLWLLENGVSG--IFNLGTGRARSFNDLADAVFKALGK 261

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370) [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 314

>gnl|CDD|187570 cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase, extended (e) SDRs

 Score = 59.1 bits (144), Expect = 1e-10
 Identities = 47/175 (26%), Positives = 70/175 (40%), Gaps = 36/175 (20%)

Query: 10  VFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNP 69
             +SS+  YG  + +P +E  P    +PY  +KL+ + I R  +R       +  R FN 
Sbjct: 120 YQASSSEEYGKVQELPQSETTPFRPRSPYAVSKLYADWITR-NYREAYGLFAVNGRLFN- 177

Query: 70  VGAHPSGKIGEDPRGIPNNLMPFVT-----QVA---VGRRPELTVFGTDYSTKDGTGVRD 121
              H      E PR        FVT     QVA    G +P L +   D         RD
Sbjct: 178 ---H------EGPRRGET----FVTRKITRQVARIKAGLQPVLKLGNLD-------AKRD 217

Query: 122 YIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMV-AAFEKASGKVHI 175
           +    D  + +   L +  +P    + Y + TG+  SV E V  AFE++     I
Sbjct: 218 WGDARDYVEAYWLLLQQ-GEP----DDYVIATGETHSVREFVELAFEESGLTGDI 267

GDP-mannose 4,6 dehydratase, a homodimeric SDR, catalyzes the NADP(H)-dependent conversion of GDP-(D)-mannose to GDP-4-keto, 6-deoxy-(D)-mannose in the fucose biosynthesis pathway. These proteins have the canonical active site triad and NAD-binding pattern, however the active site Asn is often missing and may be substituted with Asp. A Glu residue has been identified as an important active site base. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|187563 cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimerase, extended (e) SDRs

 Score = 56.6 bits (137), Expect = 1e-09
 Identities = 47/188 (25%), Positives = 75/188 (39%), Gaps = 35/188 (18%)

Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPL-EAMNPYGRTKLFIEEICRDVHRSDSEW 59
               G K+LV++SS++VYG    +P +E+  +   ++ Y  TK   E +           
Sbjct: 114 CRHFGVKHLVYASSSSVYGLNTKMPFSEDDRVDHPISLYAATKKANELMAHTYSHL-YGI 172

Query: 60  KIILLRYFNPVGAHPSGKIGEDPRGIPN-NLMPFVTQVAVGRRPELTVFGTDYSTKDGTG 118
               LR+F   G          P G P+  L  F   +  G+   + VF       DG  
Sbjct: 173 PTTGLRFFTVYG----------PWGRPDMALFLFTKAILEGK--PIDVFN------DGNM 214

Query: 119 VRDYIHVIDLADGHIAALHK-----------LDDPKIGC---EVYNLGTGKGTSVLEMVA 164
            RD+ ++ D+ +G + AL               DP        VYN+G      +++ + 
Sbjct: 215 SRDFTYIDDIVEGVVRALDTPAKPNPNWDAEAPDPSTSSAPYRVYNIGNNSPVKLMDFIE 274

Query: 165 AFEKASGK 172
           A EKA GK
Sbjct: 275 ALEKALGK 282

This subgroup contains UDP-D-glucuronic acid 4-epimerase, an extended SDR, which catalyzes the conversion of UDP-alpha-D-glucuronic acid to UDP-alpha-D-galacturonic acid. This group has the SDR's canonical catalytic tetrad and the TGxxGxxG NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 332

>gnl|CDD|187541 cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs

 Score = 51.5 bits (124), Expect = 5e-08
 Identities = 46/161 (28%), Positives = 70/161 (43%), Gaps = 29/161 (18%)

Query: 9   LVFSSSATVYGWPKVVPCTEEF-----PLEAMNPYGRTKLFIEEICRDVHRSDSEWKIIL 63
           ++ +S++ VYG P+V P  E +     P+   + Y   K   E +C   HR      + +
Sbjct: 109 VLLASTSEVYGDPEVHPQPESYWGNVNPIGPRSCYDEGKRVAETLCMAYHRQHGV-DVRI 167

Query: 64  LRYFNPVGA--HPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRD 121
            R FN  G   HP+     D R + N    F+ Q   G    +TV+G      DGT  R 
Sbjct: 168 ARIFNTYGPRMHPN-----DGRVVSN----FIVQALRGE--PITVYG------DGTQTRS 210

Query: 122 YIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEM 162
           + +V DL +G I  L   D         NLG  +  ++LE+
Sbjct: 211 FQYVSDLVEGLI-RLMNSDYFG---GPVNLGNPEEFTILEL 247

UGD catalyzes the formation of UDP-xylose from UDP-glucuronate; it is an extended-SDR, and has the characteristic glycine-rich NAD-binding pattern, TGXXGXXG, and active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187557 cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score = 49.9 bits (120), Expect = 2e-07
 Identities = 49/174 (28%), Positives = 75/174 (43%), Gaps = 29/174 (16%)

Query: 3   AHGCKNLVFSSSATVYG-WPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKI 61
            +G K  V  S+  VYG        TE  PL   +PY  +K   + + R  HR+   + +
Sbjct: 114 KYGVKRFVHISTDEVYGDLLDDGEFTETSPLAPTSPYSASKAAADLLVRAYHRT---YGL 170

Query: 62  --ILLRYFNPVGAHPSGKIGEDPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTG 118
             ++ R  N  G          P   P  L+P F+     G+   L ++G      DG  
Sbjct: 171 PVVITRCSNNYG----------PYQFPEKLIPLFILNALDGKP--LPIYG------DGLN 212

Query: 119 VRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           VRD+++V D A      L K    ++G E+YN+G G   + LE+V    +  GK
Sbjct: 213 VRDWLYVEDHARAIELVLEK---GRVG-EIYNIGGGNELTNLELVKLILELLGK 262

This subgroup contains dTDP-D-glucose 4,6-dehydratase and related proteins, members of the extended-SDR family, with the characteristic Rossmann fold core region, active site tetrad and NAD(P)-binding motif. dTDP-D-glucose 4,6-dehydratase is closely related to other sugar epimerases of the SDR family. dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway (the dehydration of dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose) in the synthesis of L-rhamnose, a cell wall component of some pathogenic bacteria. In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen. The larger N-terminal portion of dTDP-D-Glucose 4,6-dehydratase forms a Rossmann fold NAD-binding domain, while the C-terminus binds the sugar substrate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 315

>gnl|CDD|200431 TIGR04180, EDH_00030, NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family

 Score = 49.6 bits (119), Expect = 2e-07
 Identities = 45/171 (26%), Positives = 77/171 (45%), Gaps = 27/171 (15%)

Query: 5   GCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILL 64
           G + +V +S++ VYG  + VP  E+ PL+  +PY  +K+  +++    +RS     + ++
Sbjct: 112 GVEKVVHTSTSEVYGTAQYVPIDEKHPLQGQSPYSASKIGADQLALSFYRS-FNTPVTII 170

Query: 65  RYFNPVGAHPSGKIGEDPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDG--TGVRD 121
           R FN  G          PR     ++P  +TQ+A G+R            K G  +  RD
Sbjct: 171 RPFNTYG----------PRQSARAVIPTIITQIASGKR----------RIKLGSLSPTRD 210

Query: 122 YIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           + +V D   G IA     +  K   EV N+G+    S+ + V    +  G 
Sbjct: 211 FNYVTDTVRGFIAI---AESDKTVGEVINIGSNFEISIGDTVKLIAEIMGS 258

This clade within the NAD dependent epimerase/dehydratase superfamily (pfam01370) is characterized by inclusion of its members within a cassette of seven distinctive enzymes. These include four genes homologous to the elements of the neuraminic (sialic) acid biosynthesis cluster (NeuABCD), an aminotransferase and a nucleotidyltransferase in addition to the epimerase/dehydratase. Together it is very likely that these enzymes direct the biosynthesis of a nine-carbon sugar analagous to CMP-neuraminic acid. These seven genes form the core of the cassette, although they are often accompanied by additional genes that may further modify the product sugar. Although this cassette is widely distributed in bacteria, the family nomenclature arises from the instance in Leptospira interrogans serovar Lai, str. 56601, where it appears as the 30th gene in the 91-gene lipopolysaccharide biosynthesis cluster. Length = 297

>gnl|CDD|187581 cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME)-like, extended (e) SDRs

 Score = 49.8 bits (119), Expect = 2e-07
 Identities = 44/178 (24%), Positives = 69/178 (38%), Gaps = 27/178 (15%)

Query: 4   HGCKNLVFSSSATVYG-----WPKVVPCTEE--FPLEAMNPYGRTKLFIEEICRDVHRSD 56
           +G +  +F+SSA VY         VV   EE  +P E  + YG  KL  E +C   +  D
Sbjct: 106 NGVERFLFASSACVYPEFKQLETTVVRLREEDAWPAEPQDAYGWEKLATERLC-QHYNED 164

Query: 57  SEWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRP-ELTVFGTDYSTKD 115
              +  ++R+ N  G  P G    D  G          +VA  +      ++G      D
Sbjct: 165 YGIETRIVRFHNIYG--PRGTW--DG-GREKAPAAMCRKVATAKDGDRFEIWG------D 213

Query: 116 GTGVRDYIHVIDLADG-HIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           G   R + ++ D  +G          +P       NLG+ +  S+ E+       SGK
Sbjct: 214 GLQTRSFTYIDDCVEGLRRLMESDFGEP------VNLGSDEMVSMNELAEMVLSFSGK 265

This subgroup of NDP-sugar epimerase/dehydratases are extended SDRs; they have the characteristic active site tetrad, and an NAD-binding motif: TGXXGXX[AG], which is a close match to the canonical NAD-binding motif. Members include Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME) which catalyzes the epimerization of two positions of GDP-alpha-D-mannose to form GDP-beta-L-galactose. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 328

>gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs

 Score = 46.9 bits (112), Expect = 2e-06
 Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 25/157 (15%)

Query: 7   KNLVFSSSATVYGWPKVVPCTEEFPLEAMN----PYGRTKLFIEEICRDVHRSDSEWKII 62
           K +V +S++ VYG  + VP  E+ PL  +N    PY  +K   + +     RS     + 
Sbjct: 112 KRVVHTSTSEVYGTAQDVPIDEDHPLLYINKPRSPYSASKQGADRLAYSYGRSF-GLPVT 170

Query: 63  LLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDY 122
           ++R FN  G        +  R +   ++   +Q A+G+R  L   G      DG+  RD+
Sbjct: 171 IIRPFNTYG------PRQSARAVIPTII---SQRAIGQR--LINLG------DGSPTRDF 213

Query: 123 IHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSV 159
             V D A G I  L       +G E+ N G+G+  S+
Sbjct: 214 NFVKDTARGFIDIL--DAIEAVG-EIINNGSGEEISI 247

Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|185103 PRK15181, PRK15181, Vi polysaccharide biosynthesis protein TviC; Provisional

 Score = 46.2 bits (109), Expect = 3e-06
 Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 19/157 (12%)

Query: 8   NLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYF 67
           +  +++S++ YG    +P  EE     ++PY  TK ++ E+  DV     E+  I LRYF
Sbjct: 135 SFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTK-YVNELYADVFARSYEFNAIGLRYF 193

Query: 68  NPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTD--YSTKDGTGVRDYIHV 125
           N  G        ++P G  + ++P         R  L++   +  Y   DG+  RD+ ++
Sbjct: 194 NVFGRR------QNPNGAYSAVIP---------RWILSLLKDEPIYINGDGSTSRDFCYI 238

Query: 126 IDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEM 162
            ++   ++ +    +D     +VYN+  G  TS+ E+
Sbjct: 239 ENVIQANLLSA-TTNDLASKNKVYNVAVGDRTSLNEL 274

Length = 348

>gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs

 Score = 43.9 bits (104), Expect = 2e-05
 Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 4/77 (5%)

Query: 1   MAAHGCKNLVFSSSATVYG-WPK-VVPCTEEFPLEAMN--PYGRTKLFIEEICRDVHRSD 56
            AA G   +V +SS  VYG  P    P TE+ PL       Y R K  +E++  +  R  
Sbjct: 97  CAAAGVPRVVVTSSVAVYGAHPDNPAPLTEDAPLRGSPEFAYSRDKAEVEQLLAEFRRRH 156

Query: 57  SEWKIILLRYFNPVGAH 73
            E  + +LR    +G  
Sbjct: 157 PELNVTVLRPATILGPG 173

Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306

>gnl|CDD|130249 TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehydratase

 Score = 43.1 bits (102), Expect = 3e-05
 Identities = 42/140 (30%), Positives = 62/140 (44%), Gaps = 28/140 (20%)

Query: 27  TEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVG-AHPSGKIGEDPRGI 85
           TE  PL   +PY  +K   + + R  HR+          Y  P      S   G  P   
Sbjct: 139 TETTPLAPSSPYSASKAASDHLVRAYHRT----------YGLPALITRCSNNYG--PYQF 186

Query: 86  PNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHK-LDDPK 143
           P  L+P  +T    G+   L V+G      DG  VRD+++V D    H  A++  L+  +
Sbjct: 187 PEKLIPLMITNALAGKP--LPVYG------DGQQVRDWLYVED----HCRAIYLVLEKGR 234

Query: 144 IGCEVYNLGTGKGTSVLEMV 163
           +G E YN+G G   + LE+V
Sbjct: 235 VG-ETYNIGGGNERTNLEVV 253

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 317

>gnl|CDD|187550 cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs

 Score = 43.0 bits (102), Expect = 4e-05
 Identities = 47/186 (25%), Positives = 71/186 (38%), Gaps = 36/186 (19%)

Query: 1   MAAH--GCKNLVFSSSATVYGWPKVVPCTEEF----PLEAMN-PYGRTKLFIEEICRDVH 53
            AAH  G K LVF  S+ +Y      P  E      P E  N  Y   K    ++C    
Sbjct: 88  HAAHRFGVKKLVFLGSSCIYPDLAPQPIDESDLLTGPPEPTNEGYAIAKRAGLKLCEAYR 147

Query: 54  RSDSEWKIILLRY-FNPVGAHPSGKIGE----DPRG---IPNNLMPFVTQVAVGRRPELT 105
           +          +Y  + +   P+   G     DP     IP  +  F      G   E+T
Sbjct: 148 K----------QYGCDYISVMPTNLYGPHDNFDPENSHVIPALIRKFHEAKLRGG-KEVT 196

Query: 106 VFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAA 165
           V+G       GT  R++++  DLA   +  L   D+P     + N+G+G   S+ E+  A
Sbjct: 197 VWG------SGTPRREFLYSDDLARAIVFLLENYDEP----IIVNVGSGVEISIRELAEA 246

Query: 166 FEKASG 171
             +  G
Sbjct: 247 IAEVVG 252

GDP-fucose synthetase (aka 3, 5-epimerase-4-reductase) acts in the NADP-dependent synthesis of GDP-fucose from GDP-mannose. Two activities have been proposed for the same active site: epimerization and reduction. Proteins in this subgroup are extended SDRs, which have a characteristic active site tetrad and an NADP-binding motif, [AT]GXXGXXG, that is a close match to the archetypical form. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|187673 cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD(P)H steroid dehydrogenase-like protein)-like, extended (e) SDRs

 Score = 42.7 bits (101), Expect = 5e-05
 Identities = 42/214 (19%), Positives = 74/214 (34%), Gaps = 44/214 (20%)

Query: 5   GCKNLVFSSSATV-YGWPKVVPCTEEFP--LEAMNPYGRTKLFIEEICRDVHRSDSEWKI 61
           G K LV++SSA+V +    ++   E  P   +  + Y  TK   E++    +  +S    
Sbjct: 105 GVKKLVYTSSASVVFNGQDIINGDESLPYPDKHQDAYNETKALAEKLVLKANDPESGLLT 164

Query: 62  ILLRYFNPVGAHPSGKIGE-DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVR 120
             LR        P+G  G  D + +P      +     G+        T +   DG  + 
Sbjct: 165 CALR--------PAGIFGPGDRQLVPG----LLKAAKNGK--------TKFQIGDGNNLF 204

Query: 121 DYIHVIDLADGHIAALHKLDDPK----IGCEVYNLGTGKGTSVLEMVAAFEKASGKVHIF 176
           D+ +V ++A  HI A   L        +  E + +   +     +   A  +  G     
Sbjct: 205 DFTYVENVAHAHILAADALLSSSHAETVAGEAFFITNDEPIYFWDFARAIWEGLGYER-- 262

Query: 177 ALFCILFIHRWKL-----LFRFWIV--FCKFLKV 203
                      KL     L+   ++   CK L  
Sbjct: 263 -------PPSIKLPRPVALYLASLLEWTCKVLGK 289

This subgroup includes human NSDHL and related proteins. These proteins have the characteristic active site tetrad of extended SDRs, and also have a close match to their NAD(P)-binding motif. Human NSDHL is a 3beta-hydroxysteroid dehydrogenase (3 beta-HSD) which functions in the cholesterol biosynthetic pathway. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Mutations in the gene encoding NSDHL cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. This subgroup also includes an unusual bifunctional [3beta-hydroxysteroid dehydrogenase (3b-HSD)/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 335

>gnl|CDD|224013 COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

 Score = 42.6 bits (101), Expect = 6e-05
 Identities = 42/151 (27%), Positives = 61/151 (40%), Gaps = 28/151 (18%)

Query: 17  VYG--WPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHP 74
           VYG         TE  P    +PY  +K   + + R   R+       + R  N  G   
Sbjct: 129 VYGDLGLDDDAFTETTPYNPSSPYSASKAASDLLVRAYVRT-YGLPATITRCSNNYG--- 184

Query: 75  SGKIGEDPRGIPNNLMPFV-TQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHI 133
                  P   P  L+P +     +G+   L V+G      DG  +RD+++V D    H 
Sbjct: 185 -------PYQFPEKLIPLMIINALLGKP--LPVYG------DGLQIRDWLYVED----HC 225

Query: 134 AALHK-LDDPKIGCEVYNLGTGKGTSVLEMV 163
            A+   L   KIG E YN+G G   + LE+V
Sbjct: 226 RAIDLVLTKGKIG-ETYNIGGGNERTNLEVV 255

Length = 340

>gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs

 Score = 42.4 bits (100), Expect = 7e-05
 Identities = 41/198 (20%), Positives = 69/198 (34%), Gaps = 35/198 (17%)

Query: 5   GCKNLVFSSSATVY--GWPKVVPC-TEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKI 61
           G +  V++SS++V   G        T  +P    + Y  TK   E I  + +  D     
Sbjct: 105 GVQKFVYTSSSSVIFGGQNIHNGDETLPYPPLDSDMYAETKAIAEIIVLEANGRDD---- 160

Query: 62  ILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRD 121
                       P+G  G   +G+   L          +     VFG       G  + D
Sbjct: 161 -----LLTCALRPAGIFGPGDQGLVPILFE-----WAEKGLVKFVFG------RGNNLVD 204

Query: 122 YIHVIDLADGHI-AALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKVHIFALFC 180
           + +V +LA  HI AA   +    I  + Y +   +  ++ E++    KA G         
Sbjct: 205 FTYVHNLAHAHILAAAALVKGKTISGQTYFITDAEPHNMFELLRPVWKALG--------- 255

Query: 181 ILFIHRWKLLFRFWIVFC 198
             F  R K+     + +C
Sbjct: 256 --FGSRPKIRLSGPLAYC 271

Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score = 42.3 bits (100), Expect = 8e-05
 Identities = 40/177 (22%), Positives = 60/177 (33%), Gaps = 32/177 (18%)

Query: 2   AAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAM---NPYGRTKLFIEEICRDVHRSDSE 58
              G + +V +SS    G P      E  P       N Y R+KL  E    +      +
Sbjct: 99  LEAGVRRVVHTSSIAALGGPPDGRIDETTPWNERPFPNDYYRSKLLAELEVLEAAAEGLD 158

Query: 59  WKIIL-LRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGT 117
             I+     F P    P+   G D     N  +P                          
Sbjct: 159 VVIVNPSAVFGPGDEGPT-STGLDVLDYLNGKLPAYP----------------------P 195

Query: 118 GVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKVH 174
           G   ++ V D+A+GHIAA+ K    + G E Y LG G+  S  ++     + +G   
Sbjct: 196 GGTSFVDVRDVAEGHIAAMEK---GRRG-ERYILG-GENLSFKQLFETLAEITGVKP 247

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

>gnl|CDD|187549 cd05238, Gne_like_SDR_e, Escherichia coli Gne (a nucleoside-diphosphate-sugar 4-epimerase)-like, extended (e) SDRs

 Score = 42.0 bits (99), Expect = 8e-05
 Identities = 18/59 (30%), Positives = 23/59 (38%)

Query: 7   KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLR 65
              VF+SS  VYG P   P T+   L+  + YG  K   E +  D  R        L  
Sbjct: 110 PRFVFTSSLAVYGLPLPNPVTDHTALDPASSYGAQKAMCELLLNDYSRRGFVDGRTLRL 168

Nucleoside-diphosphate-sugar 4-epimerase has the characteristic active site tetrad and NAD-binding motif of the extended SDR, and is related to more specifically defined epimerases such as UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), which catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup includes Escherichia coli 055:H7 Gne, a UDP-GlcNAc 4-epimerase, essential for O55 antigen synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|165812 PLN02166, PLN02166, dTDP-glucose 4,6-dehydratase

 Score = 42.3 bits (99), Expect = 9e-05
 Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 26/159 (16%)

Query: 9   LVFSSSATVYGWPKVVPCTEEF-----PLEAMNPYGRTKLFIEEICRDVHRSDSEWKIIL 63
            + +S++ VYG P   P  E +     P+   + Y   K   E +  D HR  +  ++ +
Sbjct: 229 FLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLAMDYHRG-AGVEVRI 287

Query: 64  LRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYI 123
            R FN  G  P   + +D R + N    FV Q    R+  +TV+G      DG   R + 
Sbjct: 288 ARIFNTYG--PRMCL-DDGRVVSN----FVAQTI--RKQPMTVYG------DGKQTRSFQ 332

Query: 124 HVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEM 162
           +V DL DG +A    ++   +G   +NLG     ++LE+
Sbjct: 333 YVSDLVDGLVAL---MEGEHVG--PFNLGNPGEFTMLEL 366

Length = 436

>gnl|CDD|178326 PLN02725, PLN02725, GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

 Score = 41.2 bits (97), Expect = 2e-04
 Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 18/173 (10%)

Query: 4   HGCKNLVFSSSATVYGWPKVVPCTEEF----PLEAMNP-YGRTKLFIEEICRDVHRSDSE 58
           HG K L+F  S+ +Y      P  E      P E  N  Y   K+   ++C+  +R    
Sbjct: 91  HGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAKIAGIKMCQ-AYRIQYG 149

Query: 59  WKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTG 118
           W  I     N  G H +    E+   IP  L+    +      PE+ V+G+      G+ 
Sbjct: 150 WDAISGMPTNLYGPHDNFHP-ENSHVIPA-LIRRFHEAKANGAPEVVVWGS------GSP 201

Query: 119 VRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASG 171
           +R+++HV DLAD  +  + +        E  N+G+G   ++ E+    ++  G
Sbjct: 202 LREFLHVDDLADAVVFLMRRYSGA----EHVNVGSGDEVTIKELAELVKEVVG 250

Length = 306

>gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs

 Score = 40.8 bits (96), Expect = 2e-04
 Identities = 46/177 (25%), Positives = 63/177 (35%), Gaps = 35/177 (19%)

Query: 2   AAHGCKNLVFSSSATVYGWPKV-VPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
           A  G K  VF SS  V G   V  P  E  P    + YGR+KL  E    ++  SD   +
Sbjct: 98  ARQGVKRFVFLSSVKVNGEGTVGAPFDETDPPAPQDAYGRSKLEAERALLELGASDG-ME 156

Query: 61  IILLR----YFNPVGAHPSGKIGEDPRGIPNNL-MPFVTQVAVGRRPELTVFGTDYSTKD 115
           +++LR    Y    G    G      R I   L +P     AV  R              
Sbjct: 157 VVILRPPMVY----GPGVRGNFARLMRLIDRGLPLPP---GAVKNR-------------- 195

Query: 116 GTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
               R  + + +L D   A    +  PK     + +  G   S  E+V    +A GK
Sbjct: 196 ----RSLVSLDNLVD---AIYLCISLPKAANGTFLVSDGPPVSTAELVDEIRRALGK 245

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303

>gnl|CDD|187568 cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, extended (e) SDRs

 Score = 40.4 bits (95), Expect = 3e-04
 Identities = 49/189 (25%), Positives = 81/189 (42%), Gaps = 41/189 (21%)

Query: 8   NLVFSSSATVYG--------------W----PKVVPC--TEEFPLE-AMNPYGRTKLFIE 46
             +F+S+  VYG              +        P   +E FPL+ + + YG +K   +
Sbjct: 119 PFIFTSTNKVYGDLPNYLPLEELETRYELAPEGWSPAGISESFPLDFSHSLYGASKGAAD 178

Query: 47  EICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTV 106
           +  ++  R     K ++ R     G    G   ED +G     +    + AV  +P LT+
Sbjct: 179 QYVQEYGRI-FGLKTVVFRCGCLTGPRQFGT--ED-QGWVAYFL----KCAVTGKP-LTI 229

Query: 107 FGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGC-EVYNLGTGKGTSV--LEMV 163
           FG       G  VRD +H  DL +     L +  +P     EV+N+G G+  SV  LE++
Sbjct: 230 FGY-----GGKQVRDVLHSADLVN---LYLRQFQNPDRRKGEVFNIGGGRENSVSLLELI 281

Query: 164 AAFEKASGK 172
           A  E+ +G+
Sbjct: 282 ALCEEITGR 290

CDP-tyvelose 2-epimerase is a tetrameric SDR that catalyzes the conversion of CDP-D-paratose to CDP-D-tyvelose, the last step in tyvelose biosynthesis. This subgroup is a member of the extended SDR subfamily, with a characteristic active site tetrad and NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 337

>gnl|CDD|215146 PLN02260, PLN02260, probable rhamnose biosynthetic enzyme

 Score = 38.2 bits (89), Expect = 0.002
 Identities = 45/158 (28%), Positives = 65/158 (41%), Gaps = 25/158 (15%)

Query: 7   KNLVFSSSATVYG---WPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIIL 63
           +  +  S+  VYG       V   E   L   NPY  TK   E +     RS     +I 
Sbjct: 125 RRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYG-LPVIT 183

Query: 64  LRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYI 123
            R  N  G          P   P  L+P    +A+  +P L + G      DG+ VR Y+
Sbjct: 184 TRGNNVYG----------PNQFPEKLIPKFILLAMQGKP-LPIHG------DGSNVRSYL 226

Query: 124 HVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLE 161
           +  D+A+     LHK    ++G  VYN+GT K   V++
Sbjct: 227 YCEDVAEAFEVVLHK---GEVG-HVYNIGTKKERRVID 260

Length = 668

>gnl|CDD|182998 PRK11150, rfaD, ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

 Score = 37.4 bits (87), Expect = 0.003
 Identities = 44/176 (25%), Positives = 69/176 (39%), Gaps = 40/176 (22%)

Query: 11  FSSSATVYGWPKVVPCTEEFPLE-----AMNPYGRTKLFIEEICRDVHRSDSEWKIILLR 65
           ++SSA  YG       T++F  E      +N YG +K   +E  R +   ++  +I   R
Sbjct: 113 YASSAATYG-----GRTDDFIEEREYEKPLNVYGYSKFLFDEYVRQI-LPEANSQICGFR 166

Query: 66  YFNPVGAHPSGKIGEDPRGIPNNLMPFV-----TQVAVGRRPELTVFGTDYSTKDGTGVR 120
           YFN  G          PR      M  V      Q+  G  P+L  F    + K     R
Sbjct: 167 YFNVYG----------PREGHKGSMASVAFHLNNQLNNGENPKL--FEGSENFK-----R 209

Query: 121 DYIHVIDLADGHIAALHKLDDPKIGCE-VYNLGTGKGTSVLEMVAAFEKASGKVHI 175
           D+++V D+A  ++         + G   ++N GTG+  S   +  A      K  I
Sbjct: 210 DFVYVGDVAAVNLWFW------ENGVSGIFNCGTGRAESFQAVADAVLAYHKKGEI 259

Length = 308

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	208
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	100.0
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.95
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.94
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.93
PLN02240	352	UDP-glucose 4-epimerase	99.93
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.93
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.93
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.91
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.9
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.9
PLN02260	668	probable rhamnose biosynthetic enzyme	99.9
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.9
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.9
PLN02572	442	UDP-sulfoquinovose synthase	99.9
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.9
PLN02206	442	UDP-glucuronate decarboxylase	99.9
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.89
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.89
PLN02653	340	GDP-mannose 4,6-dehydratase	99.89
PLN02427	386	UDP-apiose/xylose synthase	99.88
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.88
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.88
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.88
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.87
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.87
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.87
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	99.86
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.85
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.85
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.84
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.84
PLN02214	342	cinnamoyl-CoA reductase	99.83
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.83
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.83
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.83
PLN00016	378	RNA-binding protein; Provisional	99.82
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.8
PLN00198	338	anthocyanidin reductase; Provisional	99.8
PLN02996	491	fatty acyl-CoA reductase	99.79
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.78
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.78
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.77
PLN02686	367	cinnamoyl-CoA reductase	99.76
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.75
PLN02650	351	dihydroflavonol-4-reductase	99.75
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.72
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.72
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.68
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.67
PRK07201	657	short chain dehydrogenase; Provisional	99.66
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.64
PLN02778	298	3,5-epimerase/4-reductase	99.63
PLN02583	297	cinnamoyl-CoA reductase	99.63
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.6
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.6
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.6
CHL00194	317	ycf39 Ycf39; Provisional	99.59
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.57
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.55
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.43
KOG2774	366	consensus NAD dependent epimerase [General functio	99.41
PLN02503	605	fatty acyl-CoA reductase 2	99.37
PRK05865	854	hypothetical protein; Provisional	99.32
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	99.3
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.29
PLN02260	668	probable rhamnose biosynthetic enzyme	99.26
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.26
KOG3019	315	consensus Predicted nucleoside-diphosphate sugar e	99.23
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.18
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.17
PRK12320	699	hypothetical protein; Provisional	98.93
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	98.88
PRK06482	276	short chain dehydrogenase; Provisional	98.83
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	98.76
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	98.69
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.66
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	98.62
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	98.58
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	98.49
PRK05875	276	short chain dehydrogenase; Provisional	98.47
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.45
PRK07074	257	short chain dehydrogenase; Provisional	98.39
PRK08263	275	short chain dehydrogenase; Provisional	98.39
PRK07775	274	short chain dehydrogenase; Provisional	98.38
PRK09135	249	pteridine reductase; Provisional	98.37
PRK06914	280	short chain dehydrogenase; Provisional	98.32
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.31
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	98.3
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	98.16
PRK07067	257	sorbitol dehydrogenase; Provisional	98.13
PRK12828	239	short chain dehydrogenase; Provisional	98.12
KOG4288	283	consensus Predicted oxidoreductase [General functi	98.07
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.06
PRK07060	245	short chain dehydrogenase; Provisional	98.05
PRK06180	277	short chain dehydrogenase; Provisional	98.05
PRK07523	255	gluconate 5-dehydrogenase; Provisional	98.04
PRK07774	250	short chain dehydrogenase; Provisional	98.03
PRK06194	287	hypothetical protein; Provisional	98.03
PRK05876	275	short chain dehydrogenase; Provisional	98.03
PRK12935	247	acetoacetyl-CoA reductase; Provisional	98.02
PRK12746	254	short chain dehydrogenase; Provisional	98.01
PRK07806	248	short chain dehydrogenase; Provisional	97.99
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	97.96
PRK09186	256	flagellin modification protein A; Provisional	97.95
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	97.93
PRK12829	264	short chain dehydrogenase; Provisional	97.93
PRK08219	227	short chain dehydrogenase; Provisional	97.92
PRK06138	252	short chain dehydrogenase; Provisional	97.89
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	97.88
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	97.86
PRK06123	248	short chain dehydrogenase; Provisional	97.84
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.81
PRK08017	256	oxidoreductase; Provisional	97.81
PRK06701	290	short chain dehydrogenase; Provisional	97.8
PRK08324	681	short chain dehydrogenase; Validated	97.79
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	97.76
PRK12827	249	short chain dehydrogenase; Provisional	97.73
PRK06128	300	oxidoreductase; Provisional	97.72
PRK07890	258	short chain dehydrogenase; Provisional	97.71
PLN03209	576	translocon at the inner envelope of chloroplast su	97.69
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	97.67
PRK06181	263	short chain dehydrogenase; Provisional	97.67
PRK12939	250	short chain dehydrogenase; Provisional	97.61
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	97.56
PRK06841	255	short chain dehydrogenase; Provisional	97.55
PRK07577	234	short chain dehydrogenase; Provisional	97.54
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	97.52
PRK06182	273	short chain dehydrogenase; Validated	97.5
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.49
PRK09134	258	short chain dehydrogenase; Provisional	97.48
PRK08264	238	short chain dehydrogenase; Validated	97.48
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.46
PRK06523	260	short chain dehydrogenase; Provisional	97.46
PRK08628	258	short chain dehydrogenase; Provisional	97.46
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	97.45
PRK12824	245	acetoacetyl-CoA reductase; Provisional	97.43
PRK05650	270	short chain dehydrogenase; Provisional	97.42
PRK10538	248	malonic semialdehyde reductase; Provisional	97.34
PRK07041	230	short chain dehydrogenase; Provisional	97.28
PRK08213	259	gluconate 5-dehydrogenase; Provisional	97.27
PRK12747	252	short chain dehydrogenase; Provisional	97.27
PRK07985	294	oxidoreductase; Provisional	97.26
PRK06179	270	short chain dehydrogenase; Provisional	97.25
PRK08277	278	D-mannonate oxidoreductase; Provisional	97.2
PRK07069	251	short chain dehydrogenase; Validated	97.17
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	97.13
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.12
PLN02253	280	xanthoxin dehydrogenase	97.12
PRK06398	258	aldose dehydrogenase; Validated	97.12
PRK05993	277	short chain dehydrogenase; Provisional	97.08
PRK12937	245	short chain dehydrogenase; Provisional	97.06
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.03
PRK06124	256	gluconate 5-dehydrogenase; Provisional	97.01
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	96.98
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.97
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	96.96
PRK09242	257	tropinone reductase; Provisional	96.96
PRK06500	249	short chain dehydrogenase; Provisional	96.95
PRK06198	260	short chain dehydrogenase; Provisional	96.94
PRK12938	246	acetyacetyl-CoA reductase; Provisional	96.93
PRK12744	257	short chain dehydrogenase; Provisional	96.92
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	96.88
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.86
PRK07856	252	short chain dehydrogenase; Provisional	96.85
PRK07825	273	short chain dehydrogenase; Provisional	96.85
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	96.81
PRK06196	315	oxidoreductase; Provisional	96.8
PRK06172	253	short chain dehydrogenase; Provisional	96.79
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.78
PRK07453	322	protochlorophyllide oxidoreductase; Validated	96.77
PRK07035	252	short chain dehydrogenase; Provisional	96.76
PRK05717	255	oxidoreductase; Validated	96.76
PRK07454	241	short chain dehydrogenase; Provisional	96.74
PRK07109	334	short chain dehydrogenase; Provisional	96.7
PRK08589	272	short chain dehydrogenase; Validated	96.7
PRK08085	254	gluconate 5-dehydrogenase; Provisional	96.7
PRK07097	265	gluconate 5-dehydrogenase; Provisional	96.64
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	96.62
PRK08643	256	acetoin reductase; Validated	96.61
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.6
PRK08251	248	short chain dehydrogenase; Provisional	96.59
PRK08703	239	short chain dehydrogenase; Provisional	96.56
PRK06949	258	short chain dehydrogenase; Provisional	96.54
PRK12742	237	oxidoreductase; Provisional	96.54
PRK12743	256	oxidoreductase; Provisional	96.52
PRK06924	251	short chain dehydrogenase; Provisional	96.46
PRK06947	248	glucose-1-dehydrogenase; Provisional	96.46
PRK07024	257	short chain dehydrogenase; Provisional	96.44
PRK07478	254	short chain dehydrogenase; Provisional	96.43
PRK06114	254	short chain dehydrogenase; Provisional	96.35
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	96.31
PRK08265	261	short chain dehydrogenase; Provisional	96.29
PRK07814	263	short chain dehydrogenase; Provisional	96.28
PRK06057	255	short chain dehydrogenase; Provisional	96.27
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	96.27
PRK06484	520	short chain dehydrogenase; Validated	96.21
PRK08226	263	short chain dehydrogenase; Provisional	96.21
PRK08339	263	short chain dehydrogenase; Provisional	96.18
PRK07063	260	short chain dehydrogenase; Provisional	96.14
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	96.13
PRK07326	237	short chain dehydrogenase; Provisional	96.08
PRK09291	257	short chain dehydrogenase; Provisional	96.05
PRK07831	262	short chain dehydrogenase; Provisional	96.04
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	95.97
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	95.96
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	95.93
PRK06483	236	dihydromonapterin reductase; Provisional	95.86
PRK06197	306	short chain dehydrogenase; Provisional	95.86
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	95.7
PRK07023	243	short chain dehydrogenase; Provisional	95.68
TIGR02415	254	23BDH acetoin reductases. One member of this famil	95.67
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	95.67
PRK08936	261	glucose-1-dehydrogenase; Provisional	95.62
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	95.62
PRK07904	253	short chain dehydrogenase; Provisional	95.62
PRK07578	199	short chain dehydrogenase; Provisional	95.6
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	95.51
PRK07576	264	short chain dehydrogenase; Provisional	95.45
PRK06101	240	short chain dehydrogenase; Provisional	95.37
PRK07677	252	short chain dehydrogenase; Provisional	95.3
PRK08340	259	glucose-1-dehydrogenase; Provisional	95.27
PRK05867	253	short chain dehydrogenase; Provisional	95.13
PRK09072	263	short chain dehydrogenase; Provisional	95.04
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.96
PRK07201	657	short chain dehydrogenase; Provisional	94.94
PRK06139	330	short chain dehydrogenase; Provisional	94.8
PRK07102	243	short chain dehydrogenase; Provisional	94.77
PRK05866	293	short chain dehydrogenase; Provisional	94.73
PRK07062	265	short chain dehydrogenase; Provisional	94.67
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	94.61
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	94.51
PRK05872	296	short chain dehydrogenase; Provisional	94.46
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	94.38
PRK07791	286	short chain dehydrogenase; Provisional	94.36
PRK06125	259	short chain dehydrogenase; Provisional	94.2
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	94.18
PRK08278	273	short chain dehydrogenase; Provisional	94.04
PRK05854	313	short chain dehydrogenase; Provisional	93.95
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	93.95
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	93.88
PRK08267	260	short chain dehydrogenase; Provisional	93.63
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	93.5
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	93.48
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	93.41
PRK06484	520	short chain dehydrogenase; Validated	93.33
COG2910	211	Putative NADH-flavin reductase [General function p	93.32
PRK05855	582	short chain dehydrogenase; Validated	93.26
PRK05693	274	short chain dehydrogenase; Provisional	93.17
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	93.15
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	92.94
PRK05884	223	short chain dehydrogenase; Provisional	92.84
PRK09009	235	C factor cell-cell signaling protein; Provisional	92.76
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	92.69
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	92.66
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	92.56
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	92.23
PRK06953	222	short chain dehydrogenase; Provisional	92.2
PLN02780	320	ketoreductase/ oxidoreductase	92.16
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	92.07
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	92.02
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	91.88
PRK07832	272	short chain dehydrogenase; Provisional	91.87
PRK08177	225	short chain dehydrogenase; Provisional	91.28
PF08732	410	HIM1: HIM1; InterPro: IPR014843 HIM1 (high inducti	91.15
PRK06940	275	short chain dehydrogenase; Provisional	89.51
PRK05599	246	hypothetical protein; Provisional	88.63
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	88.61
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	88.6
PLN00015	308	protochlorophyllide reductase	87.96
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	87.31
PRK08862	227	short chain dehydrogenase; Provisional	84.22
COG0300	265	DltE Short-chain dehydrogenases of various substra	81.52

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=2.7e-36  Score=234.82  Aligned_cols=191  Identities=42%  Similarity=0.694  Sum_probs=169.6

Q ss_pred             CccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCC
Q 028478            1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         1 a~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      |+++||++|||.||+.|||.+...|++|+.+..|.++||.||++.|++++.+.+.+ +++++++|.+++.|.+.++..|+
T Consensus       105 m~~~gv~~~vFSStAavYG~p~~~PI~E~~~~~p~NPYG~sKlm~E~iL~d~~~a~-~~~~v~LRYFN~aGA~~~G~iGe  183 (329)
T COG1087         105 MLQTGVKKFIFSSTAAVYGEPTTSPISETSPLAPINPYGRSKLMSEEILRDAAKAN-PFKVVILRYFNVAGACPDGTLGQ  183 (329)
T ss_pred             HHHhCCCEEEEecchhhcCCCCCcccCCCCCCCCCCcchhHHHHHHHHHHHHHHhC-CCcEEEEEecccccCCCCCccCC
Confidence            57889999999999999998888999999999999999999999999999999998 89999999999999999999998


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHH
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVL  160 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~  160 (208)
                      ...+. +.+++++.+++.|+.+.+.++|+||+|+||..+||||||.|+|++++++++.... +....+||+++|..+|+.
T Consensus       184 ~~~~~-thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~DLA~aH~~Al~~L~~-~g~~~~~NLG~G~G~SV~  261 (329)
T COG1087         184 RYPGA-TLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDDLADAHVLALKYLKE-GGSNNIFNLGSGNGFSVL  261 (329)
T ss_pred             CCCCc-chHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhHHHHHHHHHHHHHHh-CCceeEEEccCCCceeHH
Confidence            88876 9999999999999999999999999999999999999999999999999998644 333379999999999999


Q ss_pred             HHHHHHHHHhCCCceEEEeeeehhccchhhhhhhhhhc
Q 028478          161 EMVAAFEKASGKVHIFALFCILFIHRWKLLFRFWIVFC  198 (208)
Q Consensus       161 e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (208)
                      |+++.+.++.|.+++.++...    |.-+...++.|..
T Consensus       262 evi~a~~~vtg~~ip~~~~~R----R~GDpa~l~Ad~~  295 (329)
T COG1087         262 EVIEAAKKVTGRDIPVEIAPR----RAGDPAILVADSS  295 (329)
T ss_pred             HHHHHHHHHhCCcCceeeCCC----CCCCCceeEeCHH
Confidence            999999999999887663332    3444444444433

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.95  E-value=3.2e-27  Score=183.56  Aligned_cols=166  Identities=27%  Similarity=0.333  Sum_probs=145.0

Q ss_pred             EEEEeccccccCCCCCC--CCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCCCCCCC
Q 028478            8 NLVFSSSATVYGWPKVV--PCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGEDPRGI   85 (208)
Q Consensus         8 ~~i~~SS~~vyg~~~~~--~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~~~~~~   85 (208)
                      ||+++||..|||.....  .++|.+|..|.++|++||+++..++++|.+.| +++++|.|+++-|||.          +.
T Consensus       120 rf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKAasD~lVray~~TY-glp~~ItrcSNNYGPy----------qf  188 (340)
T COG1088         120 RFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKAASDLLVRAYVRTY-GLPATITRCSNNYGPY----------QF  188 (340)
T ss_pred             eEEEeccccccccccCCCCCcccCCCCCCCCCcchhhhhHHHHHHHHHHHc-CCceEEecCCCCcCCC----------cC
Confidence            89999999999975543  68999999999999999999999999999999 9999999999999984          33


Q ss_pred             CCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHHHHHH
Q 028478           86 PNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVA  164 (208)
Q Consensus        86 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~  164 (208)
                      +-.+++ ++.+++.|+  ++++.|      +|.+.|||+||+|-|+|+..++++    +..|++|||+++...+.-|+++
T Consensus       189 pEKlIP~~I~nal~g~--~lpvYG------dG~~iRDWl~VeDh~~ai~~Vl~k----g~~GE~YNIgg~~E~~Nlevv~  256 (340)
T COG1088         189 PEKLIPLMIINALLGK--PLPVYG------DGLQIRDWLYVEDHCRAIDLVLTK----GKIGETYNIGGGNERTNLEVVK  256 (340)
T ss_pred             chhhhHHHHHHHHcCC--CCceec------CCcceeeeEEeHhHHHHHHHHHhc----CcCCceEEeCCCccchHHHHHH
Confidence            456888 788899988  899999      999999999999999999999999    6778999999999999999999


Q ss_pred             HHHHHhCCCce-----EEEeeeehhccchhhhhhhhhhccc
Q 028478          165 AFEKASGKVHI-----FALFCILFIHRWKLLFRFWIVFCKF  200 (208)
Q Consensus       165 ~i~~~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~k~  200 (208)
                      .|-+.+|...+     +.+...    |+-.-.|..+|..|+
T Consensus       257 ~i~~~l~~~~~~~~~li~~V~D----RpGHD~RYaid~~Ki  293 (340)
T COG1088         257 TICELLGKDKPDYRDLITFVED----RPGHDRRYAIDASKI  293 (340)
T ss_pred             HHHHHhCccccchhhheEeccC----CCCCccceeechHHH
Confidence            99999998766     332222    556666777777764

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.94  E-value=2.7e-26  Score=177.16  Aligned_cols=145  Identities=28%  Similarity=0.427  Sum_probs=127.5

Q ss_pred             CCCEEEEeccccccCCCCCCCCC-CCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCCCCC
Q 028478            5 GCKNLVFSSSATVYGWPKVVPCT-EEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGEDPR   83 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~~~~~~~~-E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~~~~   83 (208)
                      ++++||++||.+|||+....... |.+...|.++|+++|+++|..++.|.+.+ +++++++|.++||||++         
T Consensus       123 ~i~~fvhvSTdeVYGds~~~~~~~E~s~~nPtnpyAasKaAaE~~v~Sy~~sy-~lpvv~~R~nnVYGP~q---------  192 (331)
T KOG0747|consen  123 NIRRFVHVSTDEVYGDSDEDAVVGEASLLNPTNPYAASKAAAEMLVRSYGRSY-GLPVVTTRMNNVYGPNQ---------  192 (331)
T ss_pred             CeeEEEEecccceecCccccccccccccCCCCCchHHHHHHHHHHHHHHhhcc-CCcEEEEeccCccCCCc---------
Confidence            78999999999999976655444 88999999999999999999999999999 99999999999999843         


Q ss_pred             CCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHHHH
Q 028478           84 GIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEM  162 (208)
Q Consensus        84 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~  162 (208)
                       ..-.+++ ++..+..++  +.++.|      +|.+.|+|+|++|+++++.++++.    +..|++|||+++..++..|+
T Consensus       193 -~~~klipkFi~l~~~~~--~~~i~g------~g~~~rs~l~veD~~ea~~~v~~K----g~~geIYNIgtd~e~~~~~l  259 (331)
T KOG0747|consen  193 -YPEKLIPKFIKLAMRGK--EYPIHG------DGLQTRSYLYVEDVSEAFKAVLEK----GELGEIYNIGTDDEMRVIDL  259 (331)
T ss_pred             -ChHHHhHHHHHHHHhCC--Ccceec------CcccceeeEeHHHHHHHHHHHHhc----CCccceeeccCcchhhHHHH
Confidence             2234555 666566666  889999      999999999999999999999999    66789999999999999999


Q ss_pred             HHHHHHHhCC
Q 028478          163 VAAFEKASGK  172 (208)
Q Consensus       163 ~~~i~~~~g~  172 (208)
                      ++.|.+.+++
T Consensus       260 ~k~i~eli~~  269 (331)
T KOG0747|consen  260 AKDICELFEK  269 (331)
T ss_pred             HHHHHHHHHH
Confidence            9999888766

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.93  E-value=2.8e-25  Score=183.25  Aligned_cols=156  Identities=24%  Similarity=0.360  Sum_probs=128.6

Q ss_pred             CccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCC
Q 028478            1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         1 a~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      |++.++++|||+||+++||.....+..|+++..|.++|+.+|.++|++++.|.+.+ +++++++||+++|||+.+     
T Consensus       128 ~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~lR~~~vyGp~~~-----  201 (348)
T PRK15181        128 ARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSY-EFNAIGLRYFNVFGRRQN-----  201 (348)
T ss_pred             HHHcCCCeEEEeechHhhCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHh-CCCEEEEEecceeCcCCC-----
Confidence            45779999999999999996555667888888899999999999999999998887 999999999999998532     


Q ss_pred             CCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCH
Q 028478           81 DPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSV  159 (208)
Q Consensus        81 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~  159 (208)
                       +.+....+++ ++.+++.++  ++.++|      +|.+.|+|+|++|+|+++++++.... ....+++||+++++.+|+
T Consensus       202 -~~~~~~~~i~~~~~~~~~~~--~i~~~g------~g~~~rd~i~v~D~a~a~~~~~~~~~-~~~~~~~yni~~g~~~s~  271 (348)
T PRK15181        202 -PNGAYSAVIPRWILSLLKDE--PIYING------DGSTSRDFCYIENVIQANLLSATTND-LASKNKVYNVAVGDRTSL  271 (348)
T ss_pred             -CCCccccCHHHHHHHHHcCC--CcEEeC------CCCceEeeEEHHHHHHHHHHHHhccc-ccCCCCEEEecCCCcEeH
Confidence             2222234555 666777776  678888      89999999999999999998876521 113468999999999999


Q ss_pred             HHHHHHHHHHhCC
Q 028478          160 LEMVAAFEKASGK  172 (208)
Q Consensus       160 ~e~~~~i~~~~g~  172 (208)
                      .|+++.+.+.++.
T Consensus       272 ~e~~~~i~~~~~~  284 (348)
T PRK15181        272 NELYYLIRDGLNL  284 (348)
T ss_pred             HHHHHHHHHHhCc
Confidence            9999999998874

>PLN02240 UDP-glucose 4-epimerase

Probab=99.93  E-value=8.3e-25  Score=180.43  Aligned_cols=175  Identities=85%  Similarity=1.375  Sum_probs=142.6

Q ss_pred             ccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhc-CCCccEEEEecccccCCCCCCCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRS-DSEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~-~~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      ++.++++||++||+.+||.....+++|+.+..|.+.|+.+|.++|++++.+.+. . +++++++|++++||+++++.+|.
T Consensus       120 ~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~-~~~~~~~R~~~v~G~~~~~~~g~  198 (352)
T PLN02240        120 AKHGCKKLVFSSSATVYGQPEEVPCTEEFPLSATNPYGRTKLFIEEICRDIHASDP-EWKIILLRYFNPVGAHPSGRIGE  198 (352)
T ss_pred             HHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CCCEEEEeecCcCCCCccccccC
Confidence            467889999999999998766678999999999999999999999999988654 4 78999999999999877766665


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcC-CCCCCCceEEecCCCCcCH
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLD-DPKIGCEVYNLGTGKGTSV  159 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~-~~~~~~~~~ni~~~~~~s~  159 (208)
                      ......+.+++++.++..++.+++.++|..+...+|.+.|+|+|++|+|++++.++++.. .....+++||+++++.+|+
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~  278 (352)
T PLN02240        199 DPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSV  278 (352)
T ss_pred             CCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCCCEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEeH
Confidence            544445667777777777766677777644444578999999999999999999987631 1123458999999999999


Q ss_pred             HHHHHHHHHHhCCCceEE
Q 028478          160 LEMVAAFEKASGKVHIFA  177 (208)
Q Consensus       160 ~e~~~~i~~~~g~~~~~~  177 (208)
                      +|+++.+.+.+|.+.++.
T Consensus       279 ~el~~~i~~~~g~~~~~~  296 (352)
T PLN02240        279 LEMVAAFEKASGKKIPLK  296 (352)
T ss_pred             HHHHHHHHHHhCCCCCce
Confidence            999999999999876654

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.93  E-value=2.5e-24  Score=176.69  Aligned_cols=176  Identities=60%  Similarity=1.066  Sum_probs=140.2

Q ss_pred             CccCCCCEEEEeccccccCCCCCCCCCCCCCC-CCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCC
Q 028478            1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPL-EAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIG   79 (208)
Q Consensus         1 a~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~-~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~   79 (208)
                      |++.++++||++||+.+||.....+++|+++. .|.+.|+.+|.++|++++.+++.+++++++++|++++||+++.+.+|
T Consensus       111 ~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g  190 (338)
T PRK10675        111 MRAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMG  190 (338)
T ss_pred             HHHcCCCEEEEeccHHhhCCCCCCccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccc
Confidence            35678999999999999986666678999887 68899999999999999998765337899999999999987666666


Q ss_pred             CCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCH
Q 028478           80 EDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSV  159 (208)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~  159 (208)
                      ..+......+++++.++..++..++.++|..++..+|.+.++|+|++|+|++++++++.... ...+++||+++++.+|+
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a~~~~~~~~~~~~-~~~~~~~ni~~~~~~s~  269 (338)
T PRK10675        191 EDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVAAMEKLAN-KPGVHIYNLGAGVGSSV  269 (338)
T ss_pred             cCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEEEeeEEHHHHHHHHHHHHHhhhc-cCCCceEEecCCCceeH
Confidence            54444345566777777766555677776555555688999999999999999999986211 23358999999999999


Q ss_pred             HHHHHHHHHHhCCCceEE
Q 028478          160 LEMVAAFEKASGKVHIFA  177 (208)
Q Consensus       160 ~e~~~~i~~~~g~~~~~~  177 (208)
                      .|+++.+.+.+|.+.++.
T Consensus       270 ~e~~~~i~~~~g~~~~~~  287 (338)
T PRK10675        270 LDVVNAFSKACGKPVNYH  287 (338)
T ss_pred             HHHHHHHHHHhCCCCCee
Confidence            999999999999876543

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.93  E-value=3.7e-25  Score=174.28  Aligned_cols=178  Identities=63%  Similarity=0.958  Sum_probs=163.3

Q ss_pred             CccCCCCEEEEeccccccCCCCCCCCCCCCCCC-CCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCC
Q 028478            1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLE-AMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIG   79 (208)
Q Consensus         1 a~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~-p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~   79 (208)
                      |++++++.+|+.||+.|||.+...|++|+++.. |.++||.+|.+.|+++..+...+ .+.++.+|.++++|.+..+..|
T Consensus       115 ~~~~~~~~~V~sssatvYG~p~~ip~te~~~t~~p~~pyg~tK~~iE~i~~d~~~~~-~~~~~~LRyfn~~ga~p~Gr~g  193 (343)
T KOG1371|consen  115 MKAHNVKALVFSSSATVYGLPTKVPITEEDPTDQPTNPYGKTKKAIEEIIHDYNKAY-GWKVTGLRYFNVIGAHPSGRIG  193 (343)
T ss_pred             HHHcCCceEEEecceeeecCcceeeccCcCCCCCCCCcchhhhHHHHHHHHhhhccc-cceEEEEEeccccCccccCccC
Confidence            467899999999999999988889999999998 99999999999999999999998 7999999999999998899999


Q ss_pred             CCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCH
Q 028478           80 EDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSV  159 (208)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~  159 (208)
                      .++.+.++++++.+.+++.++.+.+.+.|+||.+-+|+.+|++||+-|.|+.++.++..+... ...++||++++.+.++
T Consensus       194 e~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~~t~dgt~vrdyi~v~Dla~~h~~al~k~~~~-~~~~i~Nlgtg~g~~V  272 (343)
T KOG1371|consen  194 EAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDYTTIDGTIVRDYIHVLDLADGHVAALGKLRGA-AEFGVYNLGTGKGSSV  272 (343)
T ss_pred             CCCccCcccccccccchhhcccccceeecCcccccCCCeeecceeeEehHHHHHHHhhccccc-hheeeEeecCCCCccH
Confidence            888889999999999999999999999999999999999999999999999999999985322 2336999999999999


Q ss_pred             HHHHHHHHHHhCCCceEEEee
Q 028478          160 LEMVAAFEKASGKVHIFALFC  180 (208)
Q Consensus       160 ~e~~~~i~~~~g~~~~~~~~~  180 (208)
                      .+|+.++++.+|.+.++....
T Consensus       273 ~~lv~a~~k~~g~~~k~~~v~  293 (343)
T KOG1371|consen  273 LELVTAFEKALGVKIKKKVVP  293 (343)
T ss_pred             HHHHHHHHHHhcCCCCccccC
Confidence            999999999999987765433

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.91  E-value=1.2e-23  Score=177.86  Aligned_cols=156  Identities=25%  Similarity=0.404  Sum_probs=127.9

Q ss_pred             CccCCCCEEEEeccccccCCCCCCCCCCCC-----CCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCC
Q 028478            1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEF-----PLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPS   75 (208)
Q Consensus         1 a~~~~vk~~i~~SS~~vyg~~~~~~~~E~~-----~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~   75 (208)
                      |+++++ +|||+||++|||+....+.+|+.     +..|.+.|+.+|.++|++++.+++.+ +++++++|++++||++..
T Consensus       222 a~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~aE~~~~~y~~~~-~l~~~ilR~~~vYGp~~~  299 (436)
T PLN02166        222 AKRVGA-RFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLAMDYHRGA-GVEVRIARIFNTYGPRMC  299 (436)
T ss_pred             HHHhCC-EEEEECcHHHhCCCCCCCCCccccccCCCCCCCCchHHHHHHHHHHHHHHHHHh-CCCeEEEEEccccCCCCC
Confidence            456676 89999999999976555677763     66678899999999999999998887 999999999999998421


Q ss_pred             CCCCCCCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCC
Q 028478           76 GKIGEDPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTG  154 (208)
Q Consensus        76 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~  154 (208)
                            ..  .+.++. ++.++..++  ++.++|      ++++.|+|+|++|+|+++..+++.     ...++||++++
T Consensus       300 ------~~--~~~~i~~~i~~~l~~~--~i~v~g------~g~~~rdfi~V~Dva~ai~~~~~~-----~~~giyNIgs~  358 (436)
T PLN02166        300 ------LD--DGRVVSNFVAQTIRKQ--PMTVYG------DGKQTRSFQYVSDLVDGLVALMEG-----EHVGPFNLGNP  358 (436)
T ss_pred             ------CC--ccchHHHHHHHHhcCC--CcEEeC------CCCeEEeeEEHHHHHHHHHHHHhc-----CCCceEEeCCC
Confidence                  10  123444 777777776  778888      899999999999999999999976     22479999999


Q ss_pred             CCcCHHHHHHHHHHHhCCCceEEEe
Q 028478          155 KGTSVLEMVAAFEKASGKVHIFALF  179 (208)
Q Consensus       155 ~~~s~~e~~~~i~~~~g~~~~~~~~  179 (208)
                      +.+|+.|+++.|.+.+|.+.++.+.
T Consensus       359 ~~~Si~ela~~I~~~~g~~~~i~~~  383 (436)
T PLN02166        359 GEFTMLELAEVVKETIDSSATIEFK  383 (436)
T ss_pred             CcEeHHHHHHHHHHHhCCCCCeeeC
Confidence            9999999999999999987665533

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.90  E-value=9.4e-23  Score=157.68  Aligned_cols=157  Identities=25%  Similarity=0.434  Sum_probs=130.2

Q ss_pred             CccCCCCEEEEeccccccCCCCCCCCCCCC-----CCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCC
Q 028478            1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEF-----PLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPS   75 (208)
Q Consensus         1 a~~~~vk~~i~~SS~~vyg~~~~~~~~E~~-----~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~   75 (208)
                      |++.| +||+++||++|||.+...|..|+.     |..|.+.|...|..+|.++.+|+++. ++++.|.|++++|||+-.
T Consensus       129 akrv~-aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cydegKr~aE~L~~~y~k~~-giE~rIaRifNtyGPrm~  206 (350)
T KOG1429|consen  129 AKRVG-ARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYDEGKRVAETLCYAYHKQE-GIEVRIARIFNTYGPRMH  206 (350)
T ss_pred             HHHhC-ceEEEeecccccCCcccCCCccccccccCcCCchhhhhHHHHHHHHHHHHhhccc-CcEEEEEeeecccCCccc
Confidence            45566 699999999999986666666654     45577889999999999999999998 999999999999998521


Q ss_pred             CCCCCCCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCC
Q 028478           76 GKIGEDPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTG  154 (208)
Q Consensus        76 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~  154 (208)
                          ..    ...++. ++.+++.+.  ++.++|      +|.|+|+|.||+|++++++++++++     ..+.+|++++
T Consensus       207 ----~~----dgrvvsnf~~q~lr~e--pltv~g------~G~qtRSF~yvsD~Vegll~Lm~s~-----~~~pvNiGnp  265 (350)
T KOG1429|consen  207 ----MD----DGRVVSNFIAQALRGE--PLTVYG------DGKQTRSFQYVSDLVEGLLRLMESD-----YRGPVNIGNP  265 (350)
T ss_pred             ----cC----CChhhHHHHHHHhcCC--CeEEEc------CCcceEEEEeHHHHHHHHHHHhcCC-----CcCCcccCCc
Confidence                11    134555 777888877  999999      9999999999999999999999993     2366999999


Q ss_pred             CCcCHHHHHHHHHHHhCCCceEEEee
Q 028478          155 KGTSVLEMVAAFEKASGKVHIFALFC  180 (208)
Q Consensus       155 ~~~s~~e~~~~i~~~~g~~~~~~~~~  180 (208)
                      +.+|+.|+++++.+..+-...+.+..
T Consensus       266 ~e~Tm~elAemv~~~~~~~s~i~~~~  291 (350)
T KOG1429|consen  266 GEFTMLELAEMVKELIGPVSEIEFVE  291 (350)
T ss_pred             cceeHHHHHHHHHHHcCCCcceeecC
Confidence            99999999999999987665555444

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.90  E-value=1.3e-22  Score=166.99  Aligned_cols=154  Identities=20%  Similarity=0.242  Sum_probs=123.5

Q ss_pred             ccCCCC---EEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCC
Q 028478            2 AAHGCK---NLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKI   78 (208)
Q Consensus         2 ~~~~vk---~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~   78 (208)
                      ++++++   +|||+||+++||.....+.+|+.+..|.++|+.||.++|.+++.+++.+ ++++++.|+.++|||+..   
T Consensus       117 ~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~~~~~~~~gp~~~---  192 (343)
T TIGR01472       117 RTLGLIKSVKFYQASTSELYGKVQEIPQNETTPFYPRSPYAAAKLYAHWITVNYREAY-GLFAVNGILFNHESPRRG---  192 (343)
T ss_pred             HHhCCCcCeeEEEeccHHhhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHh-CCceEEEeecccCCCCCC---
Confidence            345653   8999999999997655678999999999999999999999999998888 899999999999998421   


Q ss_pred             CCCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcC
Q 028478           79 GEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTS  158 (208)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s  158 (208)
                         .......+..++.++..++. ...++|      +|++.|+|+|++|+|++++.+++++    . +++||+++++++|
T Consensus       193 ---~~~~~~~~~~~~~~~~~~~~-~~~~~g------~g~~~rd~i~V~D~a~a~~~~~~~~----~-~~~yni~~g~~~s  257 (343)
T TIGR01472       193 ---ENFVTRKITRAAAKIKLGLQ-EKLYLG------NLDAKRDWGHAKDYVEAMWLMLQQD----K-PDDYVIATGETHS  257 (343)
T ss_pred             ---ccccchHHHHHHHHHHcCCC-CceeeC------CCccccCceeHHHHHHHHHHHHhcC----C-CccEEecCCCcee
Confidence               11112223335556666652 234557      8999999999999999999999872    2 3689999999999


Q ss_pred             HHHHHHHHHHHhCCCc
Q 028478          159 VLEMVAAFEKASGKVH  174 (208)
Q Consensus       159 ~~e~~~~i~~~~g~~~  174 (208)
                      +.|+++.+.+.+|.+.
T Consensus       258 ~~e~~~~i~~~~g~~~  273 (343)
T TIGR01472       258 VREFVEVSFEYIGKTL  273 (343)
T ss_pred             HHHHHHHHHHHcCCCc
Confidence            9999999999999754

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.90  E-value=9.5e-23  Score=181.16  Aligned_cols=151  Identities=30%  Similarity=0.396  Sum_probs=125.6

Q ss_pred             ccCC-CCEEEEeccccccCCCCCC---CCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCC
Q 028478            2 AAHG-CKNLVFSSSATVYGWPKVV---PCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGK   77 (208)
Q Consensus         2 ~~~~-vk~~i~~SS~~vyg~~~~~---~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~   77 (208)
                      ++.+ +++|||+||..+||.....   +.+|+++..|.+.|+.+|.++|.+++.+.+.+ +++++++|+++|||++.   
T Consensus       119 ~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y~~sK~~aE~~v~~~~~~~-~l~~vilR~~~VyGp~~---  194 (668)
T PLN02260        119 KVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY-GLPVITTRGNNVYGPNQ---  194 (668)
T ss_pred             HhcCCCcEEEEEcchHHhCCCccccccCccccCCCCCCCCcHHHHHHHHHHHHHHHHHc-CCCEEEECcccccCcCC---
Confidence            4455 8999999999999965432   24678888899999999999999999998887 99999999999999842   


Q ss_pred             CCCCCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           78 IGEDPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        78 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                             ....+++ ++..+..++  ++.++|      ++++.|+|+|++|+|+++..+++.    ...+++||+++++.
T Consensus       195 -------~~~~~i~~~~~~a~~g~--~i~i~g------~g~~~r~~ihV~Dva~a~~~~l~~----~~~~~vyni~~~~~  255 (668)
T PLN02260        195 -------FPEKLIPKFILLAMQGK--PLPIHG------DGSNVRSYLYCEDVAEAFEVVLHK----GEVGHVYNIGTKKE  255 (668)
T ss_pred             -------CcccHHHHHHHHHhCCC--CeEEec------CCCceEeeEEHHHHHHHHHHHHhc----CCCCCEEEECCCCe
Confidence                   1234555 555566665  788888      899999999999999999999877    34468999999999


Q ss_pred             cCHHHHHHHHHHHhCCCce
Q 028478          157 TSVLEMVAAFEKASGKVHI  175 (208)
Q Consensus       157 ~s~~e~~~~i~~~~g~~~~  175 (208)
                      +|+.|+++.+.+.+|.+..
T Consensus       256 ~s~~el~~~i~~~~g~~~~  274 (668)
T PLN02260        256 RRVIDVAKDICKLFGLDPE  274 (668)
T ss_pred             eEHHHHHHHHHHHhCCCCc
Confidence            9999999999999998643

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.90  E-value=2.5e-22  Score=166.96  Aligned_cols=158  Identities=23%  Similarity=0.304  Sum_probs=125.0

Q ss_pred             CccCCCCEEEEeccccccCCCCC----CCCCCCC--CCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCC
Q 028478            1 MAAHGCKNLVFSSSATVYGWPKV----VPCTEEF--PLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHP   74 (208)
Q Consensus         1 a~~~~vk~~i~~SS~~vyg~~~~----~~~~E~~--~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~   74 (208)
                      |++.++++|||+||.++||....    .+++|++  +..|.+.|+.+|.++|++++.+.+.+ +++++++||+++|||+.
T Consensus       124 a~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~~-g~~~~ilR~~~vyGp~~  202 (370)
T PLN02695        124 ARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKDF-GIECRIGRFHNIYGPFG  202 (370)
T ss_pred             HHHhCCCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCEEEEEECCccCCCC
Confidence            35678999999999999985432    2366665  67889999999999999999998887 99999999999999842


Q ss_pred             CCCCCCCCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecC
Q 028478           75 SGKIGEDPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGT  153 (208)
Q Consensus        75 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~  153 (208)
                      .      .......+.+ ++.++.+.. .++.+++      ++++.|+|+|++|++++++.+++.    . .+++||+++
T Consensus       203 ~------~~~~~~~~~~~~~~~~~~~~-~~i~~~g------~g~~~r~~i~v~D~a~ai~~~~~~----~-~~~~~nv~~  264 (370)
T PLN02695        203 T------WKGGREKAPAAFCRKALTST-DEFEMWG------DGKQTRSFTFIDECVEGVLRLTKS----D-FREPVNIGS  264 (370)
T ss_pred             C------ccccccccHHHHHHHHHcCC-CCeEEeC------CCCeEEeEEeHHHHHHHHHHHHhc----c-CCCceEecC
Confidence            1      1111122333 555555533 3788898      899999999999999999998877    2 247899999


Q ss_pred             CCCcCHHHHHHHHHHHhCCCceEE
Q 028478          154 GKGTSVLEMVAAFEKASGKVHIFA  177 (208)
Q Consensus       154 ~~~~s~~e~~~~i~~~~g~~~~~~  177 (208)
                      ++.+|+.|+++.+.+..|.+.++.
T Consensus       265 ~~~~s~~el~~~i~~~~g~~~~i~  288 (370)
T PLN02695        265 DEMVSMNEMAEIALSFENKKLPIK  288 (370)
T ss_pred             CCceeHHHHHHHHHHHhCCCCCce
Confidence            999999999999999999765544

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.90  E-value=2e-22  Score=163.51  Aligned_cols=151  Identities=23%  Similarity=0.315  Sum_probs=119.7

Q ss_pred             CccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCC
Q 028478            1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         1 a~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      |++.++ +|||+||..+||.....+.+|+.+..|.+.|+.+|.++|++++.+...+ +++++++|++++||++..     
T Consensus       104 ~~~~~~-~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~lR~~~vyG~~~~-----  176 (308)
T PRK11150        104 CLEREI-PFLYASSAATYGGRTDDFIEEREYEKPLNVYGYSKFLFDEYVRQILPEA-NSQICGFRYFNVYGPREG-----  176 (308)
T ss_pred             HHHcCC-cEEEEcchHHhCcCCCCCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHc-CCCEEEEeeeeecCCCCC-----
Confidence            456777 6999999999996555567888888899999999999999999998777 899999999999998532     


Q ss_pred             CCCCCCCChHH-HHHHHHhCCCCeeEEE-ccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcC
Q 028478           81 DPRGIPNNLMP-FVTQVAVGRRPELTVF-GTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTS  158 (208)
Q Consensus        81 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s  158 (208)
                       .......+.. ++.++.+++  +..++ |      +++..|+|+|++|+|++++.+++.    .. +++||++++..+|
T Consensus       177 -~~~~~~~~~~~~~~~~~~~~--~~~i~~g------~~~~~r~~i~v~D~a~a~~~~~~~----~~-~~~yni~~~~~~s  242 (308)
T PRK11150        177 -HKGSMASVAFHLNNQLNNGE--NPKLFEG------SENFKRDFVYVGDVAAVNLWFWEN----GV-SGIFNCGTGRAES  242 (308)
T ss_pred             -CCCccchhHHHHHHHHhcCC--CCEEecC------CCceeeeeeeHHHHHHHHHHHHhc----CC-CCeEEcCCCCcee
Confidence             1111122232 445666665  33343 4      677889999999999999999887    22 4799999999999


Q ss_pred             HHHHHHHHHHHhCC
Q 028478          159 VLEMVAAFEKASGK  172 (208)
Q Consensus       159 ~~e~~~~i~~~~g~  172 (208)
                      +.|+++.+.+.+|.
T Consensus       243 ~~el~~~i~~~~~~  256 (308)
T PRK11150        243 FQAVADAVLAYHKK  256 (308)
T ss_pred             HHHHHHHHHHHhCC
Confidence            99999999999885

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.90  E-value=1.1e-22  Score=172.42  Aligned_cols=165  Identities=22%  Similarity=0.219  Sum_probs=122.5

Q ss_pred             CccCCCC-EEEEeccccccCCCCCCCCC-----------CCC---CCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEe
Q 028478            1 MAAHGCK-NLVFSSSATVYGWPKVVPCT-----------EEF---PLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLR   65 (208)
Q Consensus         1 a~~~~vk-~~i~~SS~~vyg~~~~~~~~-----------E~~---~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR   65 (208)
                      |++.+++ +||++||+.+||... .+++           |++   +..|.++|+.+|.++|.+++.+++.+ +++++++|
T Consensus       177 a~~~gv~~~~V~~SS~~vYG~~~-~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~-gl~~v~lR  254 (442)
T PLN02572        177 IKEFAPDCHLVKLGTMGEYGTPN-IDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW-GIRATDLN  254 (442)
T ss_pred             HHHhCCCccEEEEecceecCCCC-CCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhc-CCCEEEEe
Confidence            3566886 899999999998532 2222           222   55678899999999999999999988 99999999


Q ss_pred             cccccCCCCCCCCCC-------CCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhh
Q 028478           66 YFNPVGAHPSGKIGE-------DPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALH  137 (208)
Q Consensus        66 ~~~i~G~~~~~~~~~-------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~  137 (208)
                      ++++|||+.+.....       ...+....+++ ++.++..|+  ++.++|      +|++.|+|+||+|+|++++.+++
T Consensus       255 ~~~vyGp~~~~~~~~~~li~~~~~~~~~~~~i~~~~~~~~~g~--~i~v~g------~G~~~Rdfi~V~Dva~a~~~al~  326 (442)
T PLN02572        255 QGVVYGVRTDETMMDEELINRLDYDGVFGTALNRFCVQAAVGH--PLTVYG------KGGQTRGFLDIRDTVRCIEIAIA  326 (442)
T ss_pred             cccccCCCCcccccccccccccCcccchhhHHHHHHHHHhcCC--CceecC------CCCEEECeEEHHHHHHHHHHHHh
Confidence            999999964321000       00011113444 666777776  788888      89999999999999999999998


Q ss_pred             hcCCCCCCCceEEecCCCCcCHHHHHHHHHHH---hCCCceEE
Q 028478          138 KLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKA---SGKVHIFA  177 (208)
Q Consensus       138 ~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~---~g~~~~~~  177 (208)
                      +....+ ...+||+++ ..+|+.|+++.+.+.   +|.+.++.
T Consensus       327 ~~~~~g-~~~i~Nigs-~~~si~el~~~i~~~~~~~g~~~~~~  367 (442)
T PLN02572        327 NPAKPG-EFRVFNQFT-EQFSVNELAKLVTKAGEKLGLDVEVI  367 (442)
T ss_pred             ChhhcC-ceeEEEeCC-CceeHHHHHHHHHHHHHhhCCCCCee
Confidence            631111 125899986 579999999999999   88765554

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.90  E-value=2.4e-22  Score=165.68  Aligned_cols=160  Identities=19%  Similarity=0.309  Sum_probs=123.6

Q ss_pred             ccCCCCEEEEeccccccCCCCCCCCCCCCCC-------CCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWPKVVPCTEEFPL-------EAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHP   74 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~-------~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~   74 (208)
                      ++.+ ++|||+||+.+||.....+++|+.+.       .|.+.|+.+|.++|++++.+.+.+ +++++++||+++||++.
T Consensus       107 ~~~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~-~~~~~ilR~~~v~Gp~~  184 (347)
T PRK11908        107 VKYG-KHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYACSKQLMDRVIWAYGMEE-GLNFTLFRPFNWIGPGL  184 (347)
T ss_pred             HhcC-CeEEEEecceeeccCCCcCcCccccccccCcCCCccchHHHHHHHHHHHHHHHHHHc-CCCeEEEeeeeeeCCCc
Confidence            4556 69999999999996555566766531       356789999999999999998887 99999999999999854


Q ss_pred             CCCCCCCCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecC
Q 028478           75 SGKIGEDPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGT  153 (208)
Q Consensus        75 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~  153 (208)
                      ..... ...+ ...+++ ++.++..++  ++.+++      +|++.|+|+|++|+|++++.+++++.. ...+++||+++
T Consensus       185 ~~~~~-~~~~-~~~~i~~~~~~~~~~~--~~~~~~------~g~~~r~~i~v~D~a~a~~~~~~~~~~-~~~g~~yni~~  253 (347)
T PRK11908        185 DSIYT-PKEG-SSRVVTQFLGHIVRGE--PISLVD------GGSQKRAFTDIDDGIDALMKIIENKDG-VASGKIYNIGN  253 (347)
T ss_pred             cCCCc-cccC-CcchHHHHHHHHhCCC--ceEEec------CCceeeccccHHHHHHHHHHHHhCccc-cCCCCeEEeCC
Confidence            32111 1111 234555 677777776  677887      789999999999999999999987311 13458999998


Q ss_pred             C-CCcCHHHHHHHHHHHhCCCc
Q 028478          154 G-KGTSVLEMVAAFEKASGKVH  174 (208)
Q Consensus       154 ~-~~~s~~e~~~~i~~~~g~~~  174 (208)
                      + ..+|++|+++.|.+.+|..+
T Consensus       254 ~~~~~s~~e~~~~i~~~~~~~~  275 (347)
T PRK11908        254 PKNNHSVRELANKMLELAAEYP  275 (347)
T ss_pred             CCCCcCHHHHHHHHHHHhcCcc
Confidence            6 47999999999999998643

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.90  E-value=2.6e-22  Score=169.97  Aligned_cols=154  Identities=25%  Similarity=0.399  Sum_probs=125.0

Q ss_pred             CccCCCCEEEEeccccccCCCCCCCCCCCC-----CCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCC
Q 028478            1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEF-----PLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPS   75 (208)
Q Consensus         1 a~~~~vk~~i~~SS~~vyg~~~~~~~~E~~-----~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~   75 (208)
                      |++.++ +||++||+.+||.....+.+|+.     +..+.+.|+.+|.++|+++..+.+.+ +++++++|++++||++..
T Consensus       221 a~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~aE~~~~~y~~~~-g~~~~ilR~~~vyGp~~~  298 (442)
T PLN02206        221 AKRVGA-RFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA-NVEVRIARIFNTYGPRMC  298 (442)
T ss_pred             HHHhCC-EEEEECChHHhCCCCCCCCCccccccCCCCCccchHHHHHHHHHHHHHHHHHHh-CCCeEEEEeccccCCCCC
Confidence            456676 89999999999866555667763     44557889999999999999998887 999999999999998421


Q ss_pred             CCCCCCCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCC
Q 028478           76 GKIGEDPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTG  154 (208)
Q Consensus        76 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~  154 (208)
                            ..  .+.++. ++.++..++  ++.++|      ++++.|+|+|++|+|++++.+++..     .+++||++++
T Consensus       299 ------~~--~~~~v~~~i~~~l~~~--~i~i~g------~G~~~rdfi~V~Dva~ai~~a~e~~-----~~g~yNIgs~  357 (442)
T PLN02206        299 ------ID--DGRVVSNFVAQALRKE--PLTVYG------DGKQTRSFQFVSDLVEGLMRLMEGE-----HVGPFNLGNP  357 (442)
T ss_pred             ------cc--ccchHHHHHHHHHcCC--CcEEeC------CCCEEEeEEeHHHHHHHHHHHHhcC-----CCceEEEcCC
Confidence                  11  123444 677777766  678888      8999999999999999999999762     2368999999


Q ss_pred             CCcCHHHHHHHHHHHhCCCceEE
Q 028478          155 KGTSVLEMVAAFEKASGKVHIFA  177 (208)
Q Consensus       155 ~~~s~~e~~~~i~~~~g~~~~~~  177 (208)
                      +.+|+.|+++.+.+.+|.+.++.
T Consensus       358 ~~~sl~Elae~i~~~~g~~~~i~  380 (442)
T PLN02206        358 GEFTMLELAKVVQETIDPNAKIE  380 (442)
T ss_pred             CceeHHHHHHHHHHHhCCCCcee
Confidence            99999999999999998766554

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.89  E-value=3.7e-22  Score=164.96  Aligned_cols=146  Identities=23%  Similarity=0.313  Sum_probs=123.4

Q ss_pred             CCCCEEEEeccccccCCCC--CCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPK--VVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~--~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      .+++++|++||..+||...  ..+++|+.+..|.+.|+.+|.++|.+++.+++.+ +++++++||+++|||+.      .
T Consensus       124 ~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~p~s~Y~~sK~~~e~~~~~~~~~~-~~~~~i~r~~~v~Gp~~------~  196 (355)
T PRK10217        124 KSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTY-GLPTLITNCSNNYGPYH------F  196 (355)
T ss_pred             cCceEEEEecchhhcCCCCCCCCCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHh-CCCeEEEeeeeeeCCCC------C
Confidence            3678999999999998532  3468999988899999999999999999998887 99999999999999842      1


Q ss_pred             CCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHH
Q 028478           82 PRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVL  160 (208)
Q Consensus        82 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~  160 (208)
                          ...+++ ++.++..+.  ++.++|      ++++.|+|+|++|+|+++..+++.    ...+++||+++++.+|+.
T Consensus       197 ----~~~~~~~~~~~~~~~~--~~~~~g------~g~~~~~~i~v~D~a~a~~~~~~~----~~~~~~yni~~~~~~s~~  260 (355)
T PRK10217        197 ----PEKLIPLMILNALAGK--PLPVYG------NGQQIRDWLYVEDHARALYCVATT----GKVGETYNIGGHNERKNL  260 (355)
T ss_pred             ----cccHHHHHHHHHhcCC--CceEeC------CCCeeeCcCcHHHHHHHHHHHHhc----CCCCCeEEeCCCCcccHH
Confidence                123555 566666665  677888      899999999999999999999987    334589999999999999


Q ss_pred             HHHHHHHHHhCC
Q 028478          161 EMVAAFEKASGK  172 (208)
Q Consensus       161 e~~~~i~~~~g~  172 (208)
                      |+++.+.+.+|.
T Consensus       261 ~~~~~i~~~~~~  272 (355)
T PRK10217        261 DVVETICELLEE  272 (355)
T ss_pred             HHHHHHHHHhcc
Confidence            999999999885

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.89  E-value=2.9e-22  Score=162.07  Aligned_cols=158  Identities=25%  Similarity=0.380  Sum_probs=121.7

Q ss_pred             CccCCCCEEEEeccccccCCCCCCCCCCCC----CCCCCC-hHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCC
Q 028478            1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEF----PLEAMN-PYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPS   75 (208)
Q Consensus         1 a~~~~vk~~i~~SS~~vyg~~~~~~~~E~~----~~~p~~-~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~   75 (208)
                      |++++++++|++||+.|||.....+++|++    +..|.+ .|+.+|.++|++++.+.+.+ +++++++||+++||+...
T Consensus        88 ~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~~R~~~vyG~~~~  166 (306)
T PLN02725         88 AYRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAKIAGIKMCQAYRIQY-GWDAISGMPTNLYGPHDN  166 (306)
T ss_pred             HHHcCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHHHHHHHHHHHHHHHh-CCCEEEEEecceeCCCCC
Confidence            456789999999999999966667788886    445544 59999999999999998887 999999999999998521


Q ss_pred             CCCCCCCCCCCCChHH-HHH----HHHhCCCCeeEE-EccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceE
Q 028478           76 GKIGEDPRGIPNNLMP-FVT----QVAVGRRPELTV-FGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVY  149 (208)
Q Consensus        76 ~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~  149 (208)
                      .      ....+.+++ ++.    ....+.  ++.+ ++      ++++.++|+|++|+|+++..+++..    ...+.|
T Consensus       167 ~------~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~------~g~~~~~~i~v~Dv~~~~~~~~~~~----~~~~~~  228 (306)
T PLN02725        167 F------HPENSHVIPALIRRFHEAKANGA--PEVVVWG------SGSPLREFLHVDDLADAVVFLMRRY----SGAEHV  228 (306)
T ss_pred             C------CCCCCcccHHHHHHHHHHhhcCC--CeEEEcC------CCCeeeccccHHHHHHHHHHHHhcc----ccCcce
Confidence            0      001112222 222    223333  4444 67      7899999999999999999999872    234678


Q ss_pred             EecCCCCcCHHHHHHHHHHHhCCCceEE
Q 028478          150 NLGTGKGTSVLEMVAAFEKASGKVHIFA  177 (208)
Q Consensus       150 ni~~~~~~s~~e~~~~i~~~~g~~~~~~  177 (208)
                      |++++..+|+.|+++.+.+.+|.+.++.
T Consensus       229 ni~~~~~~s~~e~~~~i~~~~~~~~~~~  256 (306)
T PLN02725        229 NVGSGDEVTIKELAELVKEVVGFEGELV  256 (306)
T ss_pred             EeCCCCcccHHHHHHHHHHHhCCCCcee
Confidence            9999999999999999999999876554

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.89  E-value=3.1e-22  Score=164.61  Aligned_cols=145  Identities=17%  Similarity=0.152  Sum_probs=117.0

Q ss_pred             EEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCCCCCCCCC
Q 028478            8 NLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGEDPRGIPN   87 (208)
Q Consensus         8 ~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~~~~~~~~   87 (208)
                      +||++||.++||.... +++|+.+..|.+.|+.+|.++|.+++.+++.+ ++.++..|+.++|||+.      ..... .
T Consensus       133 ~~v~~Ss~~vyg~~~~-~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~~~~~~~~gp~~------~~~~~-~  203 (340)
T PLN02653        133 KYYQAGSSEMYGSTPP-PQSETTPFHPRSPYAVAKVAAHWYTVNYREAY-GLFACNGILFNHESPRR------GENFV-T  203 (340)
T ss_pred             eEEEeccHHHhCCCCC-CCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc-CCeEEEeeeccccCCCC------Ccccc-h
Confidence            8999999999996544 78999999999999999999999999998888 88889999999999842      11111 1


Q ss_pred             ChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHHHHHHHH
Q 028478           88 NLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAF  166 (208)
Q Consensus        88 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i  166 (208)
                      .++. ++.++..+.. ...++|      ++++.|+|+|++|+|++++.++++.    . ++.||+++++++|+.|+++.+
T Consensus       204 ~~~~~~~~~~~~~~~-~~~~~g------~g~~~rd~i~v~D~a~a~~~~~~~~----~-~~~yni~~g~~~s~~e~~~~i  271 (340)
T PLN02653        204 RKITRAVGRIKVGLQ-KKLFLG------NLDASRDWGFAGDYVEAMWLMLQQE----K-PDDYVVATEESHTVEEFLEEA  271 (340)
T ss_pred             hHHHHHHHHHHcCCC-CceEeC------CCcceecceeHHHHHHHHHHHHhcC----C-CCcEEecCCCceeHHHHHHHH
Confidence            2232 4445555552 223447      7999999999999999999999872    2 378999999999999999999


Q ss_pred             HHHhCCC
Q 028478          167 EKASGKV  173 (208)
Q Consensus       167 ~~~~g~~  173 (208)
                      .+.+|.+
T Consensus       272 ~~~~g~~  278 (340)
T PLN02653        272 FGYVGLN  278 (340)
T ss_pred             HHHcCCC
Confidence            9999964

>PLN02427 UDP-apiose/xylose synthase

Probab=99.88  E-value=1.3e-21  Score=163.56  Aligned_cols=159  Identities=17%  Similarity=0.275  Sum_probs=117.5

Q ss_pred             ccCCCCEEEEeccccccCCCCCCCCCCCCCC----------------------CCCChHHHhHHHHHHHHHHHhhcCCCc
Q 028478            2 AAHGCKNLVFSSSATVYGWPKVVPCTEEFPL----------------------EAMNPYGRTKLFIEEICRDVHRSDSEW   59 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~----------------------~p~~~Y~~sK~~~E~~~~~~~~~~~~~   59 (208)
                      ++.+ ++|||+||.++||.....+++|+.+.                      .|.+.|+.+|.++|++++.+++.+ ++
T Consensus       125 ~~~~-~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-g~  202 (386)
T PLN02427        125 SENN-KRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN-GL  202 (386)
T ss_pred             HhcC-CEEEEEeeeeeeCCCcCCCCCcccccccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhhc-CC
Confidence            3455 79999999999996433333333221                      234679999999999999998887 99


Q ss_pred             cEEEEecccccCCCCCCCCCC-CCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhh
Q 028478           60 KIILLRYFNPVGAHPSGKIGE-DPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALH  137 (208)
Q Consensus        60 ~~~iiR~~~i~G~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~  137 (208)
                      +++++||++|||++.....+. .+......++. ++..+..++  ++.+++      ++++.|+|+|++|+|++++.+++
T Consensus       203 ~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~g------~g~~~r~~i~V~Dva~ai~~al~  274 (386)
T PLN02427        203 EFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRE--PLKLVD------GGQSQRTFVYIKDAIEAVLLMIE  274 (386)
T ss_pred             ceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCC--CeEEEC------CCCceECcEeHHHHHHHHHHHHh
Confidence            999999999999864211110 00111123444 555666666  778888      78999999999999999999998


Q ss_pred             hcCCCCCCCceEEecCC-CCcCHHHHHHHHHHHhCC
Q 028478          138 KLDDPKIGCEVYNLGTG-KGTSVLEMVAAFEKASGK  172 (208)
Q Consensus       138 ~~~~~~~~~~~~ni~~~-~~~s~~e~~~~i~~~~g~  172 (208)
                      ++.  ...+++||++++ +.+|+.|+++.+.+.+|.
T Consensus       275 ~~~--~~~g~~yni~~~~~~~s~~el~~~i~~~~g~  308 (386)
T PLN02427        275 NPA--RANGHIFNVGNPNNEVTVRQLAEMMTEVYAK  308 (386)
T ss_pred             Ccc--cccCceEEeCCCCCCccHHHHHHHHHHHhcc
Confidence            731  124589999987 589999999999999885

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.88  E-value=5.6e-22  Score=154.51  Aligned_cols=133  Identities=35%  Similarity=0.619  Sum_probs=114.4

Q ss_pred             CccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCC
Q 028478            1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         1 a~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      |++.+++++|++||..+|+.....+++|+++..|.++|+.+|..+|++++.+.+.+ +++++++||+++||+.       
T Consensus       103 ~~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~~K~~~e~~~~~~~~~~-~~~~~~~R~~~vyG~~-------  174 (236)
T PF01370_consen  103 AREAGVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGASKRAAEELLRDYAKKY-GLRVTILRPPNVYGPG-------  174 (236)
T ss_dssp             HHHHTTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHHHHHHHHHHHHHHHHHH-TSEEEEEEESEEESTT-------
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccccccccccccc-------
Confidence            35678899999999999997777789999999999999999999999999999888 9999999999999984       


Q ss_pred             CCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEec
Q 028478           81 DPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLG  152 (208)
Q Consensus        81 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~  152 (208)
                      ........+++ ++.++.+++  ++.+++      ++++.|+|+|++|+|++++.+++++.   ..+++||++
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~~yNig  236 (236)
T PF01370_consen  175 NPNNNSSSFLPSLIRQALKGK--PIKIPG------DGSQVRDFIHVDDLAEAIVAALENPK---AAGGIYNIG  236 (236)
T ss_dssp             SSSSSTSSHHHHHHHHHHTTS--SEEEES------TSSCEEEEEEHHHHHHHHHHHHHHSC---TTTEEEEES
T ss_pred             ccccccccccchhhHHhhcCC--cccccC------CCCCccceEEHHHHHHHHHHHHhCCC---CCCCEEEeC
Confidence            12233455666 777888777  688888      89999999999999999999999942   367999986

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.88  E-value=1.7e-21  Score=158.20  Aligned_cols=162  Identities=27%  Similarity=0.402  Sum_probs=120.1

Q ss_pred             ccCCCCEEEEeccccccCCCCCCCCCCCCCC-CCCChHHHhHHHHHHHHHHHhhc-CCCccEEEEecccccCCCCCCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWPKVVPCTEEFPL-EAMNPYGRTKLFIEEICRDVHRS-DSEWKIILLRYFNPVGAHPSGKIG   79 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~-~p~~~Y~~sK~~~E~~~~~~~~~-~~~~~~~iiR~~~i~G~~~~~~~~   79 (208)
                      ++.++ +||++||+.+|+... .+++|+++. .|.+.|+.+|..+|.+++++... ..+++++++|++++||++...   
T Consensus       103 ~~~~~-~~v~~SS~~vy~~~~-~~~~e~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~---  177 (314)
T TIGR02197       103 AEKGI-PFIYASSAATYGDGE-AGFREGRELERPLNVYGYSKFLFDQYVRRRVLPEALSAQVVGLRYFNVYGPREYH---  177 (314)
T ss_pred             HHhCC-cEEEEccHHhcCCCC-CCcccccCcCCCCCHHHHHHHHHHHHHHHHhHhhccCCceEEEEEeeccCCCCCC---
Confidence            45676 899999999998643 356676654 58899999999999999876432 126799999999999985211   


Q ss_pred             CCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCH
Q 028478           80 EDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSV  159 (208)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~  159 (208)
                        .....+.+..++..+..+.  ++.+++.+-+..+|++.|+|+|++|+++++..++..     ..+++||+++++++|+
T Consensus       178 --~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~~~~~~-----~~~~~yni~~~~~~s~  248 (314)
T TIGR02197       178 --KGKMASVAFHLFNQIKAGG--NVKLFKSSEGFKDGEQLRDFVYVKDVVDVNLWLLEN-----GVSGIFNLGTGRARSF  248 (314)
T ss_pred             --CCCcccHHHHHHHHHhcCC--CeEEecCccccCCCCceeeeEEHHHHHHHHHHHHhc-----ccCceEEcCCCCCccH
Confidence              1111122334666777776  455543211122688899999999999999999987     2347999999999999


Q ss_pred             HHHHHHHHHHhCCCceEE
Q 028478          160 LEMVAAFEKASGKVHIFA  177 (208)
Q Consensus       160 ~e~~~~i~~~~g~~~~~~  177 (208)
                      .|+++.+.+.+|.+.++.
T Consensus       249 ~e~~~~i~~~~g~~~~~~  266 (314)
T TIGR02197       249 NDLADAVFKALGKDEKIE  266 (314)
T ss_pred             HHHHHHHHHHhCCCCcce
Confidence            999999999999875444

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.88  E-value=4.9e-21  Score=155.91  Aligned_cols=174  Identities=53%  Similarity=0.864  Sum_probs=135.1

Q ss_pred             ccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      ++.+++++|++||..+|+.....+++|+++..|.+.|+.+|..+|.+++.+++..++++++++||+++||+..++..+..
T Consensus       109 ~~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~  188 (328)
T TIGR01179       109 QQTGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPYGRSKLMSERILRDLSKADPGLSYVILRYFNVAGADPEGTIGED  188 (328)
T ss_pred             HhcCCCEEEEecchhhcCCCCCCCccccCCCCCCCchHHHHHHHHHHHHHHHHhccCCCEEEEecCcccCCCCCCccccC
Confidence            45678899999999999866556789999988999999999999999999877622899999999999998654433222


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHHH
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLE  161 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e  161 (208)
                      .. ....+++.+.....+...++.++|.++...++.+.++|+|++|+|+++..++..... ...+++||+++++++|+.|
T Consensus       189 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D~a~~~~~~~~~~~~-~~~~~~~n~~~~~~~s~~e  266 (328)
T TIGR01179       189 PP-GITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDLADAHLAALEYLLN-GGESHVYNLGYGQGFSVLE  266 (328)
T ss_pred             Cc-ccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHHHHHHHHHHHhhhhc-CCCcceEEcCCCCcccHHH
Confidence            11 123466655555554434666766555555678889999999999999999986321 2345899999999999999


Q ss_pred             HHHHHHHHhCCCceEE
Q 028478          162 MVAAFEKASGKVHIFA  177 (208)
Q Consensus       162 ~~~~i~~~~g~~~~~~  177 (208)
                      +++.+.+.+|.+.++.
T Consensus       267 i~~~~~~~~g~~~~~~  282 (328)
T TIGR01179       267 VIEAFKKVSGVDFPVE  282 (328)
T ss_pred             HHHHHHHHhCCCcceE
Confidence            9999999999876654

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.87  E-value=4e-21  Score=155.83  Aligned_cols=144  Identities=31%  Similarity=0.445  Sum_probs=121.6

Q ss_pred             EEEEeccccccCCCCCC-CCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCCCCCCCC
Q 028478            8 NLVFSSSATVYGWPKVV-PCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGEDPRGIP   86 (208)
Q Consensus         8 ~~i~~SS~~vyg~~~~~-~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~~~~~~~   86 (208)
                      ++|++||..+||..... +++|+++..|.+.|+.+|..+|.+++.+.... +++++++||+++||+..      .    .
T Consensus       119 ~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~i~R~~~i~G~~~------~----~  187 (317)
T TIGR01181       119 RFHHISTDEVYGDLEKGDAFTETTPLAPSSPYSASKAASDHLVRAYHRTY-GLPALITRCSNNYGPYQ------F----P  187 (317)
T ss_pred             eEEEeeccceeCCCCCCCCcCCCCCCCCCCchHHHHHHHHHHHHHHHHHh-CCCeEEEEeccccCCCC------C----c
Confidence            89999999999864432 68899888899999999999999999988877 89999999999999731      1    1


Q ss_pred             CChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHHHHHHH
Q 028478           87 NNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAA  165 (208)
Q Consensus        87 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~  165 (208)
                      ..+++ ++.++..++  ++++++      ++++.++|+|++|+|+++..++++    ...+++||+++++++++.|+++.
T Consensus       188 ~~~~~~~~~~~~~~~--~~~~~~------~g~~~~~~i~v~D~a~~~~~~~~~----~~~~~~~~~~~~~~~s~~~~~~~  255 (317)
T TIGR01181       188 EKLIPLMITNALAGK--PLPVYG------DGQQVRDWLYVEDHCRAIYLVLEK----GRVGETYNIGGGNERTNLEVVET  255 (317)
T ss_pred             ccHHHHHHHHHhcCC--CceEeC------CCceEEeeEEHHHHHHHHHHHHcC----CCCCceEEeCCCCceeHHHHHHH
Confidence            23555 666776666  677888      899999999999999999999987    34458999999999999999999


Q ss_pred             HHHHhCCCc
Q 028478          166 FEKASGKVH  174 (208)
Q Consensus       166 i~~~~g~~~  174 (208)
                      +.+.+|.+.
T Consensus       256 i~~~~~~~~  264 (317)
T TIGR01181       256 ILELLGKDE  264 (317)
T ss_pred             HHHHhCCCc
Confidence            999999754

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.87  E-value=5.1e-21  Score=157.97  Aligned_cols=146  Identities=22%  Similarity=0.310  Sum_probs=121.6

Q ss_pred             CCCEEEEeccccccCCCC---------C-CCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCC
Q 028478            5 GCKNLVFSSSATVYGWPK---------V-VPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHP   74 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~~~---------~-~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~   74 (208)
                      +++++|++||.++||...         . .+++|+++..|.+.|+.+|.++|.+++.+++.+ +++++++|++++|||..
T Consensus       124 ~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-g~~~vilr~~~v~Gp~~  202 (352)
T PRK10084        124 NAFRFHHISTDEVYGDLPHPDEVENSEELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTY-GLPTIVTNCSNNYGPYH  202 (352)
T ss_pred             cceeEEEecchhhcCCCCccccccccccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHh-CCCEEEEeccceeCCCc
Confidence            567999999999998521         1 137888899999999999999999999998887 99999999999999841


Q ss_pred             CCCCCCCCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecC
Q 028478           75 SGKIGEDPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGT  153 (208)
Q Consensus        75 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~  153 (208)
                            .    ...+++ ++.++..++  ++.+++      ++++.++|+|++|+|+++..++++    ...+++||+++
T Consensus       203 ------~----~~~~~~~~~~~~~~~~--~~~~~~------~g~~~~~~v~v~D~a~a~~~~l~~----~~~~~~yni~~  260 (352)
T PRK10084        203 ------F----PEKLIPLVILNALEGK--PLPIYG------KGDQIRDWLYVEDHARALYKVVTE----GKAGETYNIGG  260 (352)
T ss_pred             ------C----ccchHHHHHHHHhcCC--CeEEeC------CCCeEEeeEEHHHHHHHHHHHHhc----CCCCceEEeCC
Confidence                  1    123455 566666665  678888      899999999999999999999887    33468999999


Q ss_pred             CCCcCHHHHHHHHHHHhCCC
Q 028478          154 GKGTSVLEMVAAFEKASGKV  173 (208)
Q Consensus       154 ~~~~s~~e~~~~i~~~~g~~  173 (208)
                      ++.+|+.|+++.+.+.+|..
T Consensus       261 ~~~~s~~~~~~~i~~~~~~~  280 (352)
T PRK10084        261 HNEKKNLDVVLTICDLLDEI  280 (352)
T ss_pred             CCcCcHHHHHHHHHHHhccc
Confidence            99999999999999999853

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.87  E-value=4.9e-21  Score=169.83  Aligned_cols=160  Identities=16%  Similarity=0.235  Sum_probs=123.8

Q ss_pred             CccCCCCEEEEeccccccCCCCCCCCCCCCCC-------CCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCC
Q 028478            1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPL-------EAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAH   73 (208)
Q Consensus         1 a~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~-------~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~   73 (208)
                      |++++ ++|||+||.++||.....+++|+++.       .|.+.|+.+|.++|++++.+.+.+ +++++++||+++|||+
T Consensus       420 ~~~~~-~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~~-g~~~~ilR~~~vyGp~  497 (660)
T PRK08125        420 CVKYN-KRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGEKE-GLRFTLFRPFNWMGPR  497 (660)
T ss_pred             HHhcC-CeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchHHHHHHHHHHHHHHHHhc-CCceEEEEEceeeCCC
Confidence            34566 79999999999996555568887743       245689999999999999998888 9999999999999985


Q ss_pred             CCCCCCCCCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEec
Q 028478           74 PSGKIGEDPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLG  152 (208)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~  152 (208)
                      +.....  .......+++ ++.++..++  ++.++|      +|++.|+|+|++|+|++++.+++++.. ...+++||++
T Consensus       498 ~~~~~~--~~~~~~~~i~~~i~~~~~~~--~i~~~g------~g~~~rd~i~v~Dva~a~~~~l~~~~~-~~~g~iyni~  566 (660)
T PRK08125        498 LDNLNA--ARIGSSRAITQLILNLVEGS--PIKLVD------GGKQKRCFTDIRDGIEALFRIIENKDN-RCDGQIINIG  566 (660)
T ss_pred             cccccc--ccccccchHHHHHHHhcCCC--CeEEeC------CCceeeceeeHHHHHHHHHHHHhcccc-ccCCeEEEcC
Confidence            321100  0001123444 667777666  677888      899999999999999999999987311 1245899999


Q ss_pred             CCC-CcCHHHHHHHHHHHhCCC
Q 028478          153 TGK-GTSVLEMVAAFEKASGKV  173 (208)
Q Consensus       153 ~~~-~~s~~e~~~~i~~~~g~~  173 (208)
                      +++ .+|++|+++.+.+.+|..
T Consensus       567 ~~~~~~s~~el~~~i~~~~g~~  588 (660)
T PRK08125        567 NPDNEASIRELAEMLLASFEKH  588 (660)
T ss_pred             CCCCceeHHHHHHHHHHHhccC
Confidence            885 799999999999999864

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=99.86  E-value=3.8e-21  Score=144.45  Aligned_cols=168  Identities=22%  Similarity=0.244  Sum_probs=135.8

Q ss_pred             CccCCCCEEEEeccccccCCCCCCCCCCCC----CCCCCC-hHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCC
Q 028478            1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEF----PLEAMN-PYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPS   75 (208)
Q Consensus         1 a~~~~vk~~i~~SS~~vyg~~~~~~~~E~~----~~~p~~-~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~   75 (208)
                      |.++|+++++++.|+++|+.....|++|..    |.+|.+ .|+.+|.++.-.-++|+.++ +.+++.+.|+++|||+.+
T Consensus        94 a~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gYsyAKr~idv~n~aY~~qh-g~~~tsviPtNvfGphDN  172 (315)
T KOG1431|consen   94 AHEHGVKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGYSYAKRMIDVQNQAYRQQH-GRDYTSVIPTNVFGPHDN  172 (315)
T ss_pred             HHHhchhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHh-CCceeeeccccccCCCCC
Confidence            468899999999999999988888999986    455544 79999988888889999999 999999999999999632


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           76 GKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                        |.......-..++.-++.+...+..++.+||      +|...|.|+|++|+|+++++++...    ..-+..+++.++
T Consensus       173 --fnpe~sHVlPali~r~h~ak~~gtd~~~VwG------sG~PlRqFiys~DLA~l~i~vlr~Y----~~vEpiils~ge  240 (315)
T KOG1431|consen  173 --FNPENSHVLPALIHRFHEAKRNGTDELTVWG------SGSPLRQFIYSDDLADLFIWVLREY----EGVEPIILSVGE  240 (315)
T ss_pred             --CCcccccchHHHHHHHHHHHhcCCceEEEec------CCChHHHHhhHhHHHHHHHHHHHhh----cCccceEeccCc
Confidence              1222221112223334446666666999999      8999999999999999999999984    333677888877


Q ss_pred             --CcCHHHHHHHHHHHhCCCceEEEeee
Q 028478          156 --GTSVLEMVAAFEKASGKVHIFALFCI  181 (208)
Q Consensus       156 --~~s~~e~~~~i~~~~g~~~~~~~~~~  181 (208)
                        .+|++|+++++.++++...++.|++.
T Consensus       241 ~~EVtI~e~aeaV~ea~~F~G~l~~Dtt  268 (315)
T KOG1431|consen  241 SDEVTIREAAEAVVEAVDFTGKLVWDTT  268 (315)
T ss_pred             cceeEHHHHHHHHHHHhCCCceEEeecc
Confidence              79999999999999999999887764

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.85  E-value=1.9e-20  Score=154.55  Aligned_cols=149  Identities=21%  Similarity=0.215  Sum_probs=115.3

Q ss_pred             CCEEEEeccccccCCCC-CCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC------CCccEEEEecccccCCCCCCCC
Q 028478            6 CKNLVFSSSATVYGWPK-VVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD------SEWKIILLRYFNPVGAHPSGKI   78 (208)
Q Consensus         6 vk~~i~~SS~~vyg~~~-~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~------~~~~~~iiR~~~i~G~~~~~~~   78 (208)
                      +++||++||..+||... ..+++|+++..|.++|+.+|.++|.+++.+++.+      ++++++++||+++||++.    
T Consensus       119 ~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~----  194 (349)
T TIGR02622       119 VKAVVNVTSDKCYRNDEWVWGYRETDPLGGHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGD----  194 (349)
T ss_pred             CCEEEEEechhhhCCCCCCCCCccCCCCCCCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCc----
Confidence            78999999999998543 2467888888899999999999999999887643      279999999999999841    


Q ss_pred             CCCCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCC-CCCCceEEecCC--
Q 028478           79 GEDPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDP-KIGCEVYNLGTG--  154 (208)
Q Consensus        79 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~-~~~~~~~ni~~~--  154 (208)
                        .   ....+++ ++..+..+.  ++.+ +      ++++.|+|+|++|+|++++.++++.... ...+++||++++  
T Consensus       195 --~---~~~~~~~~~~~~~~~g~--~~~~-~------~g~~~rd~i~v~D~a~a~~~~~~~~~~~~~~~~~~yni~s~~~  260 (349)
T TIGR02622       195 --W---AEDRLIPDVIRAFSSNK--IVII-R------NPDATRPWQHVLEPLSGYLLLAEKLFTGQAEFAGAWNFGPRAS  260 (349)
T ss_pred             --c---hhhhhhHHHHHHHhcCC--CeEE-C------CCCcccceeeHHHHHHHHHHHHHHHhhcCccccceeeeCCCcc
Confidence              0   1124555 555666655  5554 4      6899999999999999999988763111 122479999974  


Q ss_pred             CCcCHHHHHHHHHHHhCC
Q 028478          155 KGTSVLEMVAAFEKASGK  172 (208)
Q Consensus       155 ~~~s~~e~~~~i~~~~g~  172 (208)
                      +..++.|+++.+.+.++.
T Consensus       261 ~~~s~~~~~~~i~~~~~~  278 (349)
T TIGR02622       261 DNARVVELVVDALEFWWG  278 (349)
T ss_pred             cCcCHHHHHHHHHHHhcC
Confidence            689999999999887653

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.85  E-value=7.8e-20  Score=148.15  Aligned_cols=154  Identities=32%  Similarity=0.504  Sum_probs=123.0

Q ss_pred             ccCCCCEEEEeccccccCCC-CCCCCCCC-CCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWP-KVVPCTEE-FPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIG   79 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~-~~~~~~E~-~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~   79 (208)
                      ++.+++++||+||..+|+.. ...+++|+ .+..|.++|+.+|+++|.+++.+.+.+ +++++++||+++||++..    
T Consensus       104 ~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~Yg~sK~~~E~~~~~~~~~~-~~~~~ilR~~~vyGp~~~----  178 (314)
T COG0451         104 RAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARLY-GLPVVILRPFNVYGPGDK----  178 (314)
T ss_pred             HHcCCCeEEEeCCCceECCCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCeEEEeeeeeeCCCCC----
Confidence            44699999998888887754 33368888 688888899999999999999998876 899999999999998532    


Q ss_pred             CCCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC-Cc
Q 028478           80 EDPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK-GT  157 (208)
Q Consensus        80 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~-~~  157 (208)
                        .. .++.+.. ++.++..+.. .+.+.+      ++.+.|+++|++|++++++.+++++    ..+ +||++++. ..
T Consensus       179 --~~-~~~~~~~~~~~~~~~~~~-~~~~~~------~~~~~~~~i~v~D~a~~~~~~~~~~----~~~-~~ni~~~~~~~  243 (314)
T COG0451         179 --PD-LSSGVVSAFIRQLLKGEP-IIVIGG------DGSQTRDFVYVDDVADALLLALENP----DGG-VFNIGSGTAEI  243 (314)
T ss_pred             --CC-CCcCcHHHHHHHHHhCCC-cceEeC------CCceeEeeEeHHHHHHHHHHHHhCC----CCc-EEEeCCCCCcE
Confidence              11 2223444 4555666652 255555      7888899999999999999999983    332 99999997 89


Q ss_pred             CHHHHHHHHHHHhCCCce
Q 028478          158 SVLEMVAAFEKASGKVHI  175 (208)
Q Consensus       158 s~~e~~~~i~~~~g~~~~  175 (208)
                      ++.|+++.+.+.+|....
T Consensus       244 ~~~e~~~~~~~~~~~~~~  261 (314)
T COG0451         244 TVRELAEAVAEAVGSKAP  261 (314)
T ss_pred             EHHHHHHHHHHHhCCCCc
Confidence            999999999999998765

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.84  E-value=3.8e-20  Score=149.77  Aligned_cols=140  Identities=21%  Similarity=0.164  Sum_probs=110.4

Q ss_pred             CccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCC
Q 028478            1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         1 a~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      |++.|+ ++||+||..|||.....|++|+++..|.+.||.+|.++|++++.+     ..+.+++|++++||++.      
T Consensus        92 a~~~g~-~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Yg~sK~~~E~~~~~~-----~~~~~ilR~~~vyGp~~------  159 (299)
T PRK09987         92 ANEVGA-WVVHYSTDYVFPGTGDIPWQETDATAPLNVYGETKLAGEKALQEH-----CAKHLIFRTSWVYAGKG------  159 (299)
T ss_pred             HHHcCC-eEEEEccceEECCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHHh-----CCCEEEEecceecCCCC------
Confidence            355676 899999999998766678999999999999999999999999876     34569999999999831      


Q ss_pred             CCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCC--CcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCc
Q 028478           81 DPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKD--GTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGT  157 (208)
Q Consensus        81 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~  157 (208)
                            +.++. ++..+..++  ++.+++      +  +.+.+++.+++|+++++..++..+    ..+++||+++++.+
T Consensus       160 ------~~~~~~~~~~~~~~~--~~~v~~------d~~g~~~~~~~~~d~~~~~~~~~~~~~----~~~giyni~~~~~~  221 (299)
T PRK09987        160 ------NNFAKTMLRLAKERE--ELSVIN------DQFGAPTGAELLADCTAHAIRVALNKP----EVAGLYHLVASGTT  221 (299)
T ss_pred             ------CCHHHHHHHHHhcCC--CeEEeC------CCcCCCCCHHHHHHHHHHHHHHhhccC----CCCCeEEeeCCCCc
Confidence                  13445 555555555  788887      5  566666777788888888887652    22379999999999


Q ss_pred             CHHHHHHHHHHHh
Q 028478          158 SVLEMVAAFEKAS  170 (208)
Q Consensus       158 s~~e~~~~i~~~~  170 (208)
                      |+.|+++.|.+..
T Consensus       222 s~~e~~~~i~~~~  234 (299)
T PRK09987        222 TWHDYAALVFEEA  234 (299)
T ss_pred             cHHHHHHHHHHHH
Confidence            9999999997753

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.84  E-value=8.7e-20  Score=146.13  Aligned_cols=156  Identities=24%  Similarity=0.336  Sum_probs=118.8

Q ss_pred             CccCCCCEEEEeccccccCC-CCCCC---CCCCCCCC--CCChHHHhHHHHHHHHHHHhh---cC-CCccEEEEeccccc
Q 028478            1 MAAHGCKNLVFSSSATVYGW-PKVVP---CTEEFPLE--AMNPYGRTKLFIEEICRDVHR---SD-SEWKIILLRYFNPV   70 (208)
Q Consensus         1 a~~~~vk~~i~~SS~~vyg~-~~~~~---~~E~~~~~--p~~~Y~~sK~~~E~~~~~~~~---~~-~~~~~~iiR~~~i~   70 (208)
                      |++++||+|||+||.++++. ....+   .+|+.+..  +.+.|+.||.++|++++++..   +. ..+.++++||+.||
T Consensus       103 a~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~Iy  182 (280)
T PF01073_consen  103 ARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIY  182 (280)
T ss_pred             HHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEe
Confidence            56789999999999999875 22222   35655433  567999999999999999876   21 15999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCC----CCCC
Q 028478           71 GAHPSGKIGEDPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDD----PKIG  145 (208)
Q Consensus        71 G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~----~~~~  145 (208)
                      ||+..            .+.+ +......+.  .....|      ++....+++|++|+|.++++|++....    ....
T Consensus       183 Gp~d~------------~~~~~~~~~~~~g~--~~~~~g------~~~~~~~~vyV~NvA~ahvlA~~~L~~~~~~~~~~  242 (280)
T PF01073_consen  183 GPGDQ------------RLVPRLVKMVRSGL--FLFQIG------DGNNLFDFVYVENVAHAHVLAAQALLEPGKPERVA  242 (280)
T ss_pred             Ccccc------------cccchhhHHHHhcc--cceeec------CCCceECcEeHHHHHHHHHHHHHHhccccccccCC
Confidence            98421            1222 333333443  345556      788889999999999999999876432    2367


Q ss_pred             CceEEecCCCCcC-HHHHHHHHHHHhCCCceE
Q 028478          146 CEVYNLGTGKGTS-VLEMVAAFEKASGKVHIF  176 (208)
Q Consensus       146 ~~~~ni~~~~~~s-~~e~~~~i~~~~g~~~~~  176 (208)
                      |+.|+|++++++. ..|+...+.+.+|.+.+.
T Consensus       243 G~~y~itd~~p~~~~~~f~~~~~~~~G~~~~~  274 (280)
T PF01073_consen  243 GQAYFITDGEPVPSFWDFMRPLWEALGYPPPK  274 (280)
T ss_pred             CcEEEEECCCccCcHHHHHHHHHHHCCCCCCc
Confidence            8999999999999 999999999999998664

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PLN02214 cinnamoyl-CoA reductase

Probab=99.83  E-value=1.3e-19  Score=149.14  Aligned_cols=146  Identities=19%  Similarity=0.174  Sum_probs=109.1

Q ss_pred             CccCCCCEEEEeccc-cccCCCCC---CCCCCCC------CCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEeccccc
Q 028478            1 MAAHGCKNLVFSSSA-TVYGWPKV---VPCTEEF------PLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPV   70 (208)
Q Consensus         1 a~~~~vk~~i~~SS~-~vyg~~~~---~~~~E~~------~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~   70 (208)
                      |++.++++||++||. .+||....   .+++|++      +..|.+.|+.+|.++|++++.+.+.+ +++++++||++||
T Consensus       114 a~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~-g~~~v~lRp~~vy  192 (342)
T PLN02214        114 AAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEK-GVDLVVLNPVLVL  192 (342)
T ss_pred             HHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHHHHHHHHHHHHHHHHHHHc-CCcEEEEeCCceE
Confidence            456789999999996 68974322   2478874      34467899999999999999998887 9999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEE
Q 028478           71 GAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYN  150 (208)
Q Consensus        71 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~n  150 (208)
                      ||+...      ..  ...+..+.....+..  . .+        +++.|+|+|++|+|++++++++++    ..++.||
T Consensus       193 Gp~~~~------~~--~~~~~~~~~~~~g~~--~-~~--------~~~~~~~i~V~Dva~a~~~al~~~----~~~g~yn  249 (342)
T PLN02214        193 GPPLQP------TI--NASLYHVLKYLTGSA--K-TY--------ANLTQAYVDVRDVALAHVLVYEAP----SASGRYL  249 (342)
T ss_pred             CCCCCC------CC--CchHHHHHHHHcCCc--c-cC--------CCCCcCeeEHHHHHHHHHHHHhCc----ccCCcEE
Confidence            985321      11  112222334445542  2 22        345789999999999999999883    3346899


Q ss_pred             ecCCCCcCHHHHHHHHHHHhC
Q 028478          151 LGTGKGTSVLEMVAAFEKASG  171 (208)
Q Consensus       151 i~~~~~~s~~e~~~~i~~~~g  171 (208)
                      +++ ..+++.|+++.+.+.++
T Consensus       250 ~~~-~~~~~~el~~~i~~~~~  269 (342)
T PLN02214        250 LAE-SARHRGEVVEILAKLFP  269 (342)
T ss_pred             Eec-CCCCHHHHHHHHHHHCC
Confidence            987 46899999999999985

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.83  E-value=1.5e-19  Score=142.29  Aligned_cols=143  Identities=28%  Similarity=0.254  Sum_probs=120.9

Q ss_pred             CccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCC
Q 028478            1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         1 a~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      |++.|. ++||+||..||+...+.++.|+++..|.+.||.||.++|+.++.+     +-+..|+|.+++||..       
T Consensus        88 a~~~ga-~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG~sKl~GE~~v~~~-----~~~~~I~Rtswv~g~~-------  154 (281)
T COG1091          88 AAEVGA-RLVHISTDYVFDGEKGGPYKETDTPNPLNVYGRSKLAGEEAVRAA-----GPRHLILRTSWVYGEY-------  154 (281)
T ss_pred             HHHhCC-eEEEeecceEecCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHh-----CCCEEEEEeeeeecCC-------
Confidence            456788 999999999999888889999999999999999999999999987     4567999999999963       


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHH
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVL  160 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~  160 (208)
                           .++|...|.+..+.+. ++.+.        .+|..+.+++.|+|+++..++..    ...+++||+++....||.
T Consensus       155 -----g~nFv~tml~la~~~~-~l~vv--------~Dq~gsPt~~~dlA~~i~~ll~~----~~~~~~yH~~~~g~~Swy  216 (281)
T COG1091         155 -----GNNFVKTMLRLAKEGK-ELKVV--------DDQYGSPTYTEDLADAILELLEK----EKEGGVYHLVNSGECSWY  216 (281)
T ss_pred             -----CCCHHHHHHHHhhcCC-ceEEE--------CCeeeCCccHHHHHHHHHHHHhc----cccCcEEEEeCCCcccHH
Confidence                 1457765555554443 77775        58899999999999999999988    344469999988889999


Q ss_pred             HHHHHHHHHhCCCc
Q 028478          161 EMVAAFEKASGKVH  174 (208)
Q Consensus       161 e~~~~i~~~~g~~~  174 (208)
                      |++..|.+..+.+.
T Consensus       217 dfa~~I~~~~~~~~  230 (281)
T COG1091         217 EFAKAIFEEAGVDG  230 (281)
T ss_pred             HHHHHHHHHhCCCc
Confidence            99999999998655

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.83  E-value=1.8e-19  Score=144.59  Aligned_cols=143  Identities=25%  Similarity=0.269  Sum_probs=115.7

Q ss_pred             ccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      ++.++ ++|++||.++|+.....+++|+++..|.+.|+.+|..+|++++.+     +++++++||+++||++..      
T Consensus        89 ~~~~~-~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~~K~~~E~~~~~~-----~~~~~ilR~~~v~G~~~~------  156 (287)
T TIGR01214        89 ARHGA-RLVHISTDYVFDGEGKRPYREDDATNPLNVYGQSKLAGEQAIRAA-----GPNALIVRTSWLYGGGGG------  156 (287)
T ss_pred             HHcCC-eEEEEeeeeeecCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHh-----CCCeEEEEeeecccCCCC------
Confidence            34565 899999999998666668999998889999999999999999876     578999999999998410      


Q ss_pred             CCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHH
Q 028478           82 PRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVL  160 (208)
Q Consensus        82 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~  160 (208)
                           ..++. ++..+..++  ++.+.+        ++.++++|++|+|+++..+++++   ...+++||+++++.+|+.
T Consensus       157 -----~~~~~~~~~~~~~~~--~~~~~~--------~~~~~~v~v~Dva~a~~~~~~~~---~~~~~~~ni~~~~~~s~~  218 (287)
T TIGR01214       157 -----RNFVRTMLRLAGRGE--ELRVVD--------DQIGSPTYAKDLARVIAALLQRL---ARARGVYHLANSGQCSWY  218 (287)
T ss_pred             -----CCHHHHHHHHhhcCC--CceEec--------CCCcCCcCHHHHHHHHHHHHhhc---cCCCCeEEEECCCCcCHH
Confidence                 22344 455555544  566654        46789999999999999999873   134589999999999999


Q ss_pred             HHHHHHHHHhCCCc
Q 028478          161 EMVAAFEKASGKVH  174 (208)
Q Consensus       161 e~~~~i~~~~g~~~  174 (208)
                      |+++.+.+.+|.+.
T Consensus       219 e~~~~i~~~~~~~~  232 (287)
T TIGR01214       219 EFAQAIFEEAGADG  232 (287)
T ss_pred             HHHHHHHHHhCccc
Confidence            99999999999864

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.83  E-value=8.5e-20  Score=146.75  Aligned_cols=146  Identities=25%  Similarity=0.267  Sum_probs=106.4

Q ss_pred             CccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCC
Q 028478            1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         1 a~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      |++.|+ ++||+||..||+.....+++|+++..|.+.||.+|+++|+.+++.     .-+..|+|++.+||+.       
T Consensus        89 ~~~~~~-~li~~STd~VFdG~~~~~y~E~d~~~P~~~YG~~K~~~E~~v~~~-----~~~~~IlR~~~~~g~~-------  155 (286)
T PF04321_consen   89 CKERGA-RLIHISTDYVFDGDKGGPYTEDDPPNPLNVYGRSKLEGEQAVRAA-----CPNALILRTSWVYGPS-------  155 (286)
T ss_dssp             HHHCT--EEEEEEEGGGS-SSTSSSB-TTS----SSHHHHHHHHHHHHHHHH------SSEEEEEE-SEESSS-------
T ss_pred             HHHcCC-cEEEeeccEEEcCCcccccccCCCCCCCCHHHHHHHHHHHHHHHh-----cCCEEEEecceecccC-------
Confidence            345677 999999999998777778999999999999999999999999974     2378999999999962       


Q ss_pred             CCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCH
Q 028478           81 DPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSV  159 (208)
Q Consensus        81 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~  159 (208)
                           ..+++. ++..+..++  ++.++        .++.++.+|++|+|+++..++++........++||+++++.+|+
T Consensus       156 -----~~~~~~~~~~~~~~~~--~i~~~--------~d~~~~p~~~~dlA~~i~~l~~~~~~~~~~~Giyh~~~~~~~S~  220 (286)
T PF04321_consen  156 -----GRNFLRWLLRRLRQGE--PIKLF--------DDQYRSPTYVDDLARVILELIEKNLSGASPWGIYHLSGPERVSR  220 (286)
T ss_dssp             -----SSSHHHHHHHHHHCTS--EEEEE--------SSCEE--EEHHHHHHHHHHHHHHHHH-GGG-EEEE---BS-EEH
T ss_pred             -----CCchhhhHHHHHhcCC--eeEee--------CCceeCCEEHHHHHHHHHHHHHhcccccccceeEEEecCcccCH
Confidence                 134666 444555555  77775        46789999999999999999998322122359999999999999


Q ss_pred             HHHHHHHHHHhCCCc
Q 028478          160 LEMVAAFEKASGKVH  174 (208)
Q Consensus       160 ~e~~~~i~~~~g~~~  174 (208)
                      .|+++.+.+.+|.+.
T Consensus       221 ~e~~~~i~~~~~~~~  235 (286)
T PF04321_consen  221 YEFAEAIAKILGLDP  235 (286)
T ss_dssp             HHHHHHHHHHHTHCT
T ss_pred             HHHHHHHHHHhCCCC
Confidence            999999999999887

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PLN00016 RNA-binding protein; Provisional

Probab=99.82  E-value=3e-19  Score=148.97  Aligned_cols=146  Identities=21%  Similarity=0.233  Sum_probs=117.2

Q ss_pred             CccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCC
Q 028478            1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         1 a~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      |++.|+++|||+||..+|+.....+..|+++..|.+    +|..+|.+++.    . +++++++||+++||+...     
T Consensus       152 a~~~gvkr~V~~SS~~vyg~~~~~p~~E~~~~~p~~----sK~~~E~~l~~----~-~l~~~ilRp~~vyG~~~~-----  217 (378)
T PLN00016        152 AKSPGLKQFLFCSSAGVYKKSDEPPHVEGDAVKPKA----GHLEVEAYLQK----L-GVNWTSFRPQYIYGPGNN-----  217 (378)
T ss_pred             HHHcCCCEEEEEccHhhcCCCCCCCCCCCCcCCCcc----hHHHHHHHHHH----c-CCCeEEEeceeEECCCCC-----
Confidence            456899999999999999966556778887766654    79999988764    3 899999999999998411     


Q ss_pred             CCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCH
Q 028478           81 DPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSV  159 (208)
Q Consensus        81 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~  159 (208)
                            +.+.. ++.++..++  ++.+.+      ++.+.++|+|++|+|+++..+++++   ...+++||+++++.+|+
T Consensus       218 ------~~~~~~~~~~~~~~~--~i~~~g------~g~~~~~~i~v~Dva~ai~~~l~~~---~~~~~~yni~~~~~~s~  280 (378)
T PLN00016        218 ------KDCEEWFFDRLVRGR--PVPIPG------SGIQLTQLGHVKDLASMFALVVGNP---KAAGQIFNIVSDRAVTF  280 (378)
T ss_pred             ------CchHHHHHHHHHcCC--ceeecC------CCCeeeceecHHHHHHHHHHHhcCc---cccCCEEEecCCCccCH
Confidence                  12333 455666665  677777      7899999999999999999999884   23458999999999999


Q ss_pred             HHHHHHHHHHhCCCceEE
Q 028478          160 LEMVAAFEKASGKVHIFA  177 (208)
Q Consensus       160 ~e~~~~i~~~~g~~~~~~  177 (208)
                      .|+++.+.+.+|.+.++.
T Consensus       281 ~el~~~i~~~~g~~~~i~  298 (378)
T PLN00016        281 DGMAKACAKAAGFPEEIV  298 (378)
T ss_pred             HHHHHHHHHHhCCCCcee
Confidence            999999999999876543

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.80  E-value=1.2e-18  Score=142.27  Aligned_cols=142  Identities=18%  Similarity=0.216  Sum_probs=108.3

Q ss_pred             CCCEEEEeccccccCCC-----CCCCCCCCCCCCC------CChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCC
Q 028478            5 GCKNLVFSSSATVYGWP-----KVVPCTEEFPLEA------MNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAH   73 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~~-----~~~~~~E~~~~~p------~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~   73 (208)
                      ++++||++||..+|+..     ...+++|+++..|      .++|+.+|.++|++++.|.+.+ +++++++||+++|||+
T Consensus       120 ~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~ilR~~~vyGp~  198 (325)
T PLN02989        120 SVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDN-EIDLIVLNPGLVTGPI  198 (325)
T ss_pred             CceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcccccchHHHHHHHHHHHHHHHHHc-CCeEEEEcCCceeCCC
Confidence            56799999998877532     2235788887765      3689999999999999998887 9999999999999985


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecC
Q 028478           74 PSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGT  153 (208)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~  153 (208)
                      ..      ..  .+.+..++..+..++. +   ++        .+.|+|+|++|+|++++.+++++    ..+++||++ 
T Consensus       199 ~~------~~--~~~~~~~i~~~~~~~~-~---~~--------~~~r~~i~v~Dva~a~~~~l~~~----~~~~~~ni~-  253 (325)
T PLN02989        199 LQ------PT--LNFSVAVIVELMKGKN-P---FN--------TTHHRFVDVRDVALAHVKALETP----SANGRYIID-  253 (325)
T ss_pred             CC------CC--CCchHHHHHHHHcCCC-C---CC--------CcCcCeeEHHHHHHHHHHHhcCc----ccCceEEEe-
Confidence            32      11  1223345666666652 1   12        34589999999999999999873    224689995 


Q ss_pred             CCCcCHHHHHHHHHHHhCC
Q 028478          154 GKGTSVLEMVAAFEKASGK  172 (208)
Q Consensus       154 ~~~~s~~e~~~~i~~~~g~  172 (208)
                      +..+|+.|+++.+.+.++.
T Consensus       254 ~~~~s~~ei~~~i~~~~~~  272 (325)
T PLN02989        254 GPVVTIKDIENVLREFFPD  272 (325)
T ss_pred             cCCCCHHHHHHHHHHHCCC
Confidence            5579999999999999874

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.80  E-value=1.2e-18  Score=143.14  Aligned_cols=147  Identities=19%  Similarity=0.188  Sum_probs=106.3

Q ss_pred             CCCEEEEeccccccCCCC----CCCCCCCC---------CCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccC
Q 028478            5 GCKNLVFSSSATVYGWPK----VVPCTEEF---------PLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVG   71 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~~~----~~~~~E~~---------~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G   71 (208)
                      ++++||++||.++|+...    ..+++|+.         +..|.++|+.+|.++|.+++.|.+.+ +++++++||++|||
T Consensus       122 ~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~R~~~vyG  200 (338)
T PLN00198        122 SVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEEN-NIDLITVIPTLMAG  200 (338)
T ss_pred             CccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHhc-CceEEEEeCCceEC
Confidence            689999999999998432    23455542         23467889999999999999999888 99999999999999


Q ss_pred             CCCCCCCCCCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCC----cceeeeeeHHHHHHHHHHHhhhcCCCCCCCc
Q 028478           72 AHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDG----TGVRDYIHVIDLADGHIAALHKLDDPKIGCE  147 (208)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~  147 (208)
                      |+...       . ...++.++..+..++  ++.+.|.     .+    +..|+|+|++|+|++++++++.+    ..++
T Consensus       201 p~~~~-------~-~~~~~~~~~~~~~~~--~~~~~g~-----~~~~~~~~~~~~i~V~D~a~a~~~~~~~~----~~~~  261 (338)
T PLN00198        201 PSLTS-------D-IPSSLSLAMSLITGN--EFLINGL-----KGMQMLSGSISITHVEDVCRAHIFLAEKE----SASG  261 (338)
T ss_pred             CCccC-------C-CCCcHHHHHHHHcCC--ccccccc-----cccccccCCcceeEHHHHHHHHHHHhhCc----CcCC
Confidence            85321       1 112333344555554  4444331     12    22479999999999999999873    2235


Q ss_pred             eEEecCCCCcCHHHHHHHHHHHhCC
Q 028478          148 VYNLGTGKGTSVLEMVAAFEKASGK  172 (208)
Q Consensus       148 ~~ni~~~~~~s~~e~~~~i~~~~g~  172 (208)
                      .|+ +++..+|+.|+++.+.+.++.
T Consensus       262 ~~~-~~~~~~s~~el~~~i~~~~~~  285 (338)
T PLN00198        262 RYI-CCAANTSVPELAKFLIKRYPQ  285 (338)
T ss_pred             cEE-EecCCCCHHHHHHHHHHHCCC
Confidence            674 556779999999999998763

>PLN02996 fatty acyl-CoA reductase

Probab=99.79  E-value=1.6e-18  Score=148.66  Aligned_cols=127  Identities=13%  Similarity=0.063  Sum_probs=95.9

Q ss_pred             CChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCC
Q 028478           35 MNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTK  114 (208)
Q Consensus        35 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  114 (208)
                      .+.|+.||+++|+++..+..   +++++++||++|||+......|+.+..  .....++....+|.  ...++|      
T Consensus       233 pn~Y~~TK~~aE~lv~~~~~---~lpv~i~RP~~V~G~~~~p~~gwi~~~--~~~~~i~~~~~~g~--~~~~~g------  299 (491)
T PLN02996        233 PNTYVFTKAMGEMLLGNFKE---NLPLVIIRPTMITSTYKEPFPGWIEGL--RTIDSVIVGYGKGK--LTCFLA------  299 (491)
T ss_pred             CCchHhhHHHHHHHHHHhcC---CCCEEEECCCEeccCCcCCCCCcccch--hhHHHHHHHhccce--EeEEec------
Confidence            46799999999999988743   799999999999998754433333221  12223454455554  556778      


Q ss_pred             CCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCC--CCcCHHHHHHHHHHHhCCCc
Q 028478          115 DGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTG--KGTSVLEMVAAFEKASGKVH  174 (208)
Q Consensus       115 ~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~--~~~s~~e~~~~i~~~~g~~~  174 (208)
                      +|++.+|++||+|+|++++.++.........+++||++++  .++|+.|+++.+.+.++..+
T Consensus       300 dg~~~~D~v~Vddvv~a~l~a~~~~~~~~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~~p  361 (491)
T PLN02996        300 DPNSVLDVIPADMVVNAMIVAMAAHAGGQGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSKNP  361 (491)
T ss_pred             CCCeecceecccHHHHHHHHHHHHhhccCCCCcEEEecCCCCCcccHHHHHHHHHHHhhhCC
Confidence            8999999999999999999998862111123579999988  88999999999999877543

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.78  E-value=4.7e-18  Score=138.76  Aligned_cols=142  Identities=19%  Similarity=0.229  Sum_probs=106.3

Q ss_pred             CCCCEEEEecccccc--CCC---CCCCCCCCCCCC------CCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCC
Q 028478            4 HGCKNLVFSSSATVY--GWP---KVVPCTEEFPLE------AMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGA   72 (208)
Q Consensus         4 ~~vk~~i~~SS~~vy--g~~---~~~~~~E~~~~~------p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~   72 (208)
                      .++++||++||.++|  +..   ...+++|++...      +.+.|+.+|.++|.+++.|.+++ +++++++||+++|||
T Consensus       118 ~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~-~~~~~~lrp~~v~Gp  196 (322)
T PLN02986        118 PSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKDN-GIDMVVLNPGFICGP  196 (322)
T ss_pred             CCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhccccchHHHHHHHHHHHHHHHHHh-CCeEEEEcccceeCC
Confidence            378999999998764  432   123467776543      35789999999999999998887 999999999999998


Q ss_pred             CCCCCCCCCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEec
Q 028478           73 HPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLG  152 (208)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~  152 (208)
                      ....      .  .+....++.....+.  ++  ++        .+.++|+|++|+|++++++++++    ..++.||++
T Consensus       197 ~~~~------~--~~~~~~~~~~~~~g~--~~--~~--------~~~~~~v~v~Dva~a~~~al~~~----~~~~~yni~  252 (322)
T PLN02986        197 LLQP------T--LNFSVELIVDFINGK--NL--FN--------NRFYRFVDVRDVALAHIKALETP----SANGRYIID  252 (322)
T ss_pred             CCCC------C--CCccHHHHHHHHcCC--CC--CC--------CcCcceeEHHHHHHHHHHHhcCc----ccCCcEEEe
Confidence            5321      1  111223555555554  22  22        45789999999999999999984    223589995


Q ss_pred             CCCCcCHHHHHHHHHHHhC
Q 028478          153 TGKGTSVLEMVAAFEKASG  171 (208)
Q Consensus       153 ~~~~~s~~e~~~~i~~~~g  171 (208)
                       +..+|+.|+++++.+.++
T Consensus       253 -~~~~s~~e~~~~i~~~~~  270 (322)
T PLN02986        253 -GPIMSVNDIIDILRELFP  270 (322)
T ss_pred             -cCCCCHHHHHHHHHHHCC
Confidence             567999999999999986

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.78  E-value=5.3e-18  Score=140.18  Aligned_cols=151  Identities=15%  Similarity=0.164  Sum_probs=103.9

Q ss_pred             CCCEEEEeccccccCCCC-----CCCCCCCCC--C-------CCCChHHHhHHHHHHHHHHHhhcCCCccEEEEeccccc
Q 028478            5 GCKNLVFSSSATVYGWPK-----VVPCTEEFP--L-------EAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPV   70 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~~~-----~~~~~E~~~--~-------~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~   70 (208)
                      ++++||++||.++||...     ..+++|+.+  .       .+.++|+.+|.++|++++.|.+.+ +++++++|++++|
T Consensus       129 ~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~lR~~~vy  207 (353)
T PLN02896        129 TVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKEN-GIDLVSVITTTVA  207 (353)
T ss_pred             CccEEEEEechhhccccccCCCCCCccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHc-CCeEEEEcCCccc
Confidence            488999999999998422     134667632  1       234589999999999999999888 9999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEE
Q 028478           71 GAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYN  150 (208)
Q Consensus        71 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~n  150 (208)
                      ||+..+      .  ...++..+.....+....+...+   ........++|+|++|+|++++.+++.+    ..++.|+
T Consensus       208 Gp~~~~------~--~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~dfi~v~Dva~a~~~~l~~~----~~~~~~~  272 (353)
T PLN02896        208 GPFLTP------S--VPSSIQVLLSPITGDSKLFSILS---AVNSRMGSIALVHIEDICDAHIFLMEQT----KAEGRYI  272 (353)
T ss_pred             CCCcCC------C--CCchHHHHHHHhcCCcccccccc---ccccccCceeEEeHHHHHHHHHHHHhCC----CcCccEE
Confidence            985321      1  12333333333334321222221   0001112479999999999999999872    2235786


Q ss_pred             ecCCCCcCHHHHHHHHHHHhCC
Q 028478          151 LGTGKGTSVLEMVAAFEKASGK  172 (208)
Q Consensus       151 i~~~~~~s~~e~~~~i~~~~g~  172 (208)
                      + ++..+|+.|+++.+.+.++.
T Consensus       273 ~-~~~~~s~~el~~~i~~~~~~  293 (353)
T PLN02896        273 C-CVDSYDMSELINHLSKEYPC  293 (353)
T ss_pred             e-cCCCCCHHHHHHHHHHhCCC
Confidence            5 56789999999999998873

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.77  E-value=8.2e-18  Score=137.11  Aligned_cols=142  Identities=18%  Similarity=0.166  Sum_probs=106.3

Q ss_pred             CCCEEEEecccc--ccCCC---CCCCCCCCCCCCC------CChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCC
Q 028478            5 GCKNLVFSSSAT--VYGWP---KVVPCTEEFPLEA------MNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAH   73 (208)
Q Consensus         5 ~vk~~i~~SS~~--vyg~~---~~~~~~E~~~~~p------~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~   73 (208)
                      ++++|||+||.+  +|+..   ...+++|+.+..|      .+.|+.+|.++|++++.+.+.+ +++++++||+++|||.
T Consensus       118 ~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~lRp~~v~Gp~  196 (322)
T PLN02662        118 SVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKEN-GIDMVTINPAMVIGPL  196 (322)
T ss_pred             CCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcccchHHHHHHHHHHHHHHHHHHc-CCcEEEEeCCcccCCC
Confidence            789999999976  46532   2235788876655      2589999999999999998887 9999999999999984


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecC
Q 028478           74 PSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGT  153 (208)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~  153 (208)
                      ..      ..  .+.....+.++..+.  +  .        .+.+.++|+|++|+|++++++++++    ..++.||++ 
T Consensus       197 ~~------~~--~~~~~~~~~~~~~~~--~--~--------~~~~~~~~i~v~Dva~a~~~~~~~~----~~~~~~~~~-  251 (322)
T PLN02662        197 LQ------PT--LNTSAEAILNLINGA--Q--T--------FPNASYRWVDVRDVANAHIQAFEIP----SASGRYCLV-  251 (322)
T ss_pred             CC------CC--CCchHHHHHHHhcCC--c--c--------CCCCCcCeEEHHHHHHHHHHHhcCc----CcCCcEEEe-
Confidence            21      11  112223455555543  2  1        1346799999999999999999883    223578887 


Q ss_pred             CCCcCHHHHHHHHHHHhCC
Q 028478          154 GKGTSVLEMVAAFEKASGK  172 (208)
Q Consensus       154 ~~~~s~~e~~~~i~~~~g~  172 (208)
                      +..+|+.|+++.+.+.++.
T Consensus       252 g~~~s~~e~~~~i~~~~~~  270 (322)
T PLN02662        252 ERVVHYSEVVKILHELYPT  270 (322)
T ss_pred             CCCCCHHHHHHHHHHHCCC
Confidence            5779999999999998764

>PLN02686 cinnamoyl-CoA reductase

Probab=99.76  E-value=5.7e-18  Score=140.73  Aligned_cols=147  Identities=18%  Similarity=0.102  Sum_probs=107.3

Q ss_pred             CCCEEEEeccc--cccCCC--CC--CCCCCCC------CCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCC
Q 028478            5 GCKNLVFSSSA--TVYGWP--KV--VPCTEEF------PLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGA   72 (208)
Q Consensus         5 ~vk~~i~~SS~--~vyg~~--~~--~~~~E~~------~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~   72 (208)
                      ++++|||+||.  .+||..  ..  ..++|++      +..|.++|+.+|.++|.+++.+.+.+ +++++++||++||||
T Consensus       171 ~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-gl~~v~lRp~~vyGp  249 (367)
T PLN02686        171 SVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARGK-GLKLATICPALVTGP  249 (367)
T ss_pred             CccEEEEeccHHHhcccccCCCCCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHhc-CceEEEEcCCceECC
Confidence            79999999996  577631  11  2355653      33466789999999999999998887 999999999999998


Q ss_pred             CCCCCCCCCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEec
Q 028478           73 HPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLG  152 (208)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~  152 (208)
                      +...      .. +.    .+.....+.   +.++|      ++.  ++|+||+|+|++++++++.+. ....+++| ++
T Consensus       250 ~~~~------~~-~~----~~~~~~~g~---~~~~g------~g~--~~~v~V~Dva~A~~~al~~~~-~~~~~~~y-i~  305 (367)
T PLN02686        250 GFFR------RN-ST----ATIAYLKGA---QEMLA------DGL--LATADVERLAEAHVCVYEAMG-NKTAFGRY-IC  305 (367)
T ss_pred             CCCC------CC-Ch----hHHHHhcCC---CccCC------CCC--cCeEEHHHHHHHHHHHHhccC-CCCCCCcE-EE
Confidence            4211      10 11    122344443   34555      553  579999999999999998531 12345688 88


Q ss_pred             CCCCcCHHHHHHHHHHHhCCCceE
Q 028478          153 TGKGTSVLEMVAAFEKASGKVHIF  176 (208)
Q Consensus       153 ~~~~~s~~e~~~~i~~~~g~~~~~  176 (208)
                      ++..+++.|+++.|.+.+|.+...
T Consensus       306 ~g~~~s~~e~~~~i~~~~g~~~~~  329 (367)
T PLN02686        306 FDHVVSREDEAEELARQIGLPINK  329 (367)
T ss_pred             eCCCccHHHHHHHHHHHcCCCCCc
Confidence            889999999999999999987554

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.75  E-value=4.7e-17  Score=132.70  Aligned_cols=148  Identities=20%  Similarity=0.342  Sum_probs=112.2

Q ss_pred             ccCCCCEEEEeccccccCC-CCCCCCCCCCCCCC---CChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGW-PKVVPCTEEFPLEA---MNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGK   77 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~-~~~~~~~E~~~~~p---~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~   77 (208)
                      ++.+++++|++||..+|+. ....+.+|+.+..+   .+.|+.+|.++|++++.+...+ +++++++||+++||++... 
T Consensus       101 ~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~ilR~~~~~G~~~~~-  178 (328)
T TIGR03466       101 LEAGVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAALEMAAEK-GLPVVIVNPSTPIGPRDIK-  178 (328)
T ss_pred             HHhCCCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHHHHHHHHHHHHHHhc-CCCEEEEeCCccCCCCCCC-
Confidence            4568899999999999985 34457888887765   4589999999999999998877 8999999999999984210 


Q ss_pred             CCCCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCc
Q 028478           78 IGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGT  157 (208)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~  157 (208)
                           .   .....++.....++.   +.+.        +..++|+|++|+|++++.+++++    ..+..|+++ ++.+
T Consensus       179 -----~---~~~~~~~~~~~~~~~---~~~~--------~~~~~~i~v~D~a~a~~~~~~~~----~~~~~~~~~-~~~~  234 (328)
T TIGR03466       179 -----P---TPTGRIIVDFLNGKM---PAYV--------DTGLNLVHVDDVAEGHLLALERG----RIGERYILG-GENL  234 (328)
T ss_pred             -----C---CcHHHHHHHHHcCCC---ceee--------CCCcceEEHHHHHHHHHHHHhCC----CCCceEEec-CCCc
Confidence                 0   111123444444442   2222        22368999999999999999872    345788886 6789


Q ss_pred             CHHHHHHHHHHHhCCCce
Q 028478          158 SVLEMVAAFEKASGKVHI  175 (208)
Q Consensus       158 s~~e~~~~i~~~~g~~~~  175 (208)
                      |+.|+++.+.+.+|.+.+
T Consensus       235 s~~e~~~~i~~~~g~~~~  252 (328)
T TIGR03466       235 TLKQILDKLAEITGRPAP  252 (328)
T ss_pred             CHHHHHHHHHHHhCCCCC
Confidence            999999999999998654

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PLN02650 dihydroflavonol-4-reductase

Probab=99.75  E-value=3.3e-17  Score=135.32  Aligned_cols=146  Identities=16%  Similarity=0.198  Sum_probs=102.1

Q ss_pred             ccCC-CCEEEEeccccccCCC-CCCC-CCCCCC---------CCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccc
Q 028478            2 AAHG-CKNLVFSSSATVYGWP-KVVP-CTEEFP---------LEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNP   69 (208)
Q Consensus         2 ~~~~-vk~~i~~SS~~vyg~~-~~~~-~~E~~~---------~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i   69 (208)
                      ++.+ +++|||+||..+|+.. ...+ ++|+..         ..|.++|+.+|.++|.+++.|.+.+ +++++++||+++
T Consensus       115 ~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-gi~~~ilRp~~v  193 (351)
T PLN02650        115 AKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAEN-GLDFISIIPTLV  193 (351)
T ss_pred             HhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccccchHHHHHHHHHHHHHHHHHHc-CCeEEEECCCce
Confidence            3445 7899999999777632 2223 466532         1245689999999999999999888 999999999999


Q ss_pred             cCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceE
Q 028478           70 VGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVY  149 (208)
Q Consensus        70 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~  149 (208)
                      |||....       .....++..+ ....+.. .  .++       ..+.|+|+|++|+|++++.+++++    ..++.|
T Consensus       194 ~Gp~~~~-------~~~~~~~~~~-~~~~~~~-~--~~~-------~~~~r~~v~V~Dva~a~~~~l~~~----~~~~~~  251 (351)
T PLN02650        194 VGPFIST-------SMPPSLITAL-SLITGNE-A--HYS-------IIKQGQFVHLDDLCNAHIFLFEHP----AAEGRY  251 (351)
T ss_pred             ECCCCCC-------CCCccHHHHH-HHhcCCc-c--ccC-------cCCCcceeeHHHHHHHHHHHhcCc----CcCceE
Confidence            9985321       1112233322 1223331 1  122       223589999999999999999873    223578


Q ss_pred             EecCCCCcCHHHHHHHHHHHhC
Q 028478          150 NLGTGKGTSVLEMVAAFEKASG  171 (208)
Q Consensus       150 ni~~~~~~s~~e~~~~i~~~~g  171 (208)
                       ++++..+|+.|+++.|.+.++
T Consensus       252 -i~~~~~~s~~el~~~i~~~~~  272 (351)
T PLN02650        252 -ICSSHDATIHDLAKMLREKYP  272 (351)
T ss_pred             -EecCCCcCHHHHHHHHHHhCc
Confidence             556677999999999999876

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.72  E-value=1.7e-16  Score=123.28  Aligned_cols=175  Identities=19%  Similarity=0.133  Sum_probs=148.7

Q ss_pred             EEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCCCCCCCCC
Q 028478            8 NLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGEDPRGIPN   87 (208)
Q Consensus         8 ~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~~~~~~~~   87 (208)
                      ||...||+..||.....|.+|.+|+.|.++|+.+|+.+-.+...|.+.| ++..+.-+++|.-+|.      +...-...
T Consensus       125 rfYQAStSE~fG~v~~~pq~E~TPFyPrSPYAvAKlYa~W~tvNYResY-gl~AcnGILFNHESP~------Rge~FVTR  197 (345)
T COG1089         125 RFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESY-GLFACNGILFNHESPL------RGETFVTR  197 (345)
T ss_pred             EEEecccHHhhcCcccCccccCCCCCCCCHHHHHHHHHHheeeehHhhc-CceeecceeecCCCCC------CccceehH
Confidence            8999999999998888899999999999999999999999999999999 9999999999999884      23333345


Q ss_pred             ChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHHHHHHHHH
Q 028478           88 NLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFE  167 (208)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~  167 (208)
                      .+...+.++..|....+.+ |      +-+..|||-|..|.++++...++++     ....|.+++|+..|++|++++..
T Consensus       198 KIt~ava~Ik~G~q~~l~l-G------NldAkRDWG~A~DYVe~mwlmLQq~-----~PddyViATg~t~sVrefv~~Af  265 (345)
T COG1089         198 KITRAVARIKLGLQDKLYL-G------NLDAKRDWGHAKDYVEAMWLMLQQE-----EPDDYVIATGETHSVREFVELAF  265 (345)
T ss_pred             HHHHHHHHHHccccceEEe-c------cccccccccchHHHHHHHHHHHccC-----CCCceEEecCceeeHHHHHHHHH
Confidence            5666777888888766654 7      8999999999999999999999993     24779999999999999999999


Q ss_pred             HHhCCCce-----------------EEEeeeehhccchhhhhhhhhhcccc
Q 028478          168 KASGKVHI-----------------FALFCILFIHRWKLLFRFWIVFCKFL  201 (208)
Q Consensus       168 ~~~g~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~k~~  201 (208)
                      +..|.+.+                 ..+..+|...|+.+..-+..|+.|..
T Consensus       266 ~~~g~~l~w~g~g~~e~g~da~~G~~~V~idp~~fRPaEV~~Llgdp~KA~  316 (345)
T COG1089         266 EMVGIDLEWEGTGVDEKGVDAKTGKIIVEIDPRYFRPAEVDLLLGDPTKAK  316 (345)
T ss_pred             HHcCceEEEeeccccccccccccCceeEEECccccCchhhhhhcCCHHHHH
Confidence            99997765                 34455666678888888888888754

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.72  E-value=1.9e-16  Score=127.15  Aligned_cols=146  Identities=21%  Similarity=0.163  Sum_probs=106.4

Q ss_pred             ccCCCC--EEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCC
Q 028478            2 AAHGCK--NLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIG   79 (208)
Q Consensus         2 ~~~~vk--~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~   79 (208)
                      ++++++  ++|++||..+||.....+++|+++..+.+.|+..+...|..+..+. .. +++++++||+++||+..     
T Consensus        98 ~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~~~~~~~~~e~~~~~~~-~~-~~~~~ilR~~~v~G~~~-----  170 (292)
T TIGR01777        98 AAAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDFLAELCRDWEEAAQAAE-DL-GTRVVLLRTGIVLGPKG-----  170 (292)
T ss_pred             HhcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCCChHHHHHHHHHHHhhhch-hc-CCceEEEeeeeEECCCc-----
Confidence            455664  5666777788986666678898866676777777777787776553 34 79999999999999831     


Q ss_pred             CCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCH
Q 028478           80 EDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSV  159 (208)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~  159 (208)
                          +....+...+ ....+.     .+|      ++++.++|+|++|+|+++..+++++    ...++||+++++.+|+
T Consensus       171 ----~~~~~~~~~~-~~~~~~-----~~g------~~~~~~~~i~v~Dva~~i~~~l~~~----~~~g~~~~~~~~~~s~  230 (292)
T TIGR01777       171 ----GALAKMLPPF-RLGLGG-----PLG------SGRQWFSWIHIEDLVQLILFALENA----SISGPVNATAPEPVRN  230 (292)
T ss_pred             ----chhHHHHHHH-hcCccc-----ccC------CCCcccccEeHHHHHHHHHHHhcCc----ccCCceEecCCCccCH
Confidence                1111111111 111111     135      7899999999999999999999873    2347899999999999


Q ss_pred             HHHHHHHHHHhCCCc
Q 028478          160 LEMVAAFEKASGKVH  174 (208)
Q Consensus       160 ~e~~~~i~~~~g~~~  174 (208)
                      .|+++.|.+.+|.+.
T Consensus       231 ~di~~~i~~~~g~~~  245 (292)
T TIGR01777       231 KEFAKALARALHRPA  245 (292)
T ss_pred             HHHHHHHHHHhCCCC
Confidence            999999999999764

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.68  E-value=9.5e-16  Score=124.89  Aligned_cols=155  Identities=25%  Similarity=0.337  Sum_probs=119.0

Q ss_pred             CccCCCCEEEEeccccccCCCCCCC-CCCCCCCC--CCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCC
Q 028478            1 MAAHGCKNLVFSSSATVYGWPKVVP-CTEEFPLE--AMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGK   77 (208)
Q Consensus         1 a~~~~vk~~i~~SS~~vyg~~~~~~-~~E~~~~~--p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~   77 (208)
                      |++.||+++||+||..|..+..... -+|+.|..  ..+.|+.||+.+|+++++.+... ++.++++||+.||||+.   
T Consensus       113 c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~sKa~aE~~Vl~an~~~-~l~T~aLR~~~IYGpgd---  188 (361)
T KOG1430|consen  113 CKELGVKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPYGESKALAEKLVLEANGSD-DLYTCALRPPGIYGPGD---  188 (361)
T ss_pred             HHHhCCCEEEEecCceEEeCCeecccCCCCCCCccccccccchHHHHHHHHHHHhcCCC-CeeEEEEccccccCCCC---
Confidence            6789999999999999876444332 34544433  34699999999999999998665 89999999999999852   


Q ss_pred             CCCCCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcC--CCCCCCceEEecCC
Q 028478           78 IGEDPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLD--DPKIGCEVYNLGTG  154 (208)
Q Consensus        78 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~~~~~~ni~~~  154 (208)
                               ..+.+ +..-+.++.  -+-..|      +++...++++++.+|.++++|.....  .+...|+.|+|.++
T Consensus       189 ---------~~~~~~i~~~~~~g~--~~f~~g------~~~~~~~~~~~~Nva~ahilA~~aL~~~~~~~~Gq~yfI~d~  251 (361)
T KOG1430|consen  189 ---------KRLLPKIVEALKNGG--FLFKIG------DGENLNDFTYGENVAWAHILAARALLDKSPSVNGQFYFITDD  251 (361)
T ss_pred             ---------ccccHHHHHHHHccC--ceEEee------ccccccceEEechhHHHHHHHHHHHHhcCCccCceEEEEeCC
Confidence                     12334 444444554  344455      78889999999999999999987743  33467899999999


Q ss_pred             CCcCHHHHHHHHHHHhCCCceE
Q 028478          155 KGTSVLEMVAAFEKASGKVHIF  176 (208)
Q Consensus       155 ~~~s~~e~~~~i~~~~g~~~~~  176 (208)
                      +++...++...+.+.+|...+.
T Consensus       252 ~p~~~~~~~~~l~~~lg~~~~~  273 (361)
T KOG1430|consen  252 TPVRFFDFLSPLVKALGYCLPS  273 (361)
T ss_pred             CcchhhHHHHHHHHhcCCCCCc
Confidence            9887777777999999998773

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.67  E-value=1.3e-15  Score=124.54  Aligned_cols=130  Identities=21%  Similarity=0.314  Sum_probs=98.8

Q ss_pred             ccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHh---hcCCCccEEEEecccccCCCCCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVH---RSDSEWKIILLRYFNPVGAHPSGKI   78 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~---~~~~~~~~~iiR~~~i~G~~~~~~~   78 (208)
                      ++.++++||++||...              ..|.++|+.+|.++|.+++.++   ..+ +++++++||+++||++     
T Consensus       113 ~~~~~~~iV~~SS~~~--------------~~p~~~Y~~sK~~~E~l~~~~~~~~~~~-gi~~~~lR~g~v~G~~-----  172 (324)
T TIGR03589       113 IDNGVKRVVALSTDKA--------------ANPINLYGATKLASDKLFVAANNISGSK-GTRFSVVRYGNVVGSR-----  172 (324)
T ss_pred             HHcCCCEEEEEeCCCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcccc-CcEEEEEeecceeCCC-----
Confidence            4568889999999532              2356789999999999998754   345 8999999999999973     


Q ss_pred             CCCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcC
Q 028478           79 GEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTS  158 (208)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s  158 (208)
                              ..+++++.+....+..++++.       ++.+.|+|+|++|+|++++.++++    ...+++| ++++..++
T Consensus       173 --------~~~i~~~~~~~~~~~~~~~i~-------~~~~~r~~i~v~D~a~a~~~al~~----~~~~~~~-~~~~~~~s  232 (324)
T TIGR03589       173 --------GSVVPFFKSLKEEGVTELPIT-------DPRMTRFWITLEQGVNFVLKSLER----MLGGEIF-VPKIPSMK  232 (324)
T ss_pred             --------CCcHHHHHHHHHhCCCCeeeC-------CCCceEeeEEHHHHHHHHHHHHhh----CCCCCEE-ccCCCcEE
Confidence                    125564444444332245654       578899999999999999999987    2345788 46667799


Q ss_pred             HHHHHHHHHHHhC
Q 028478          159 VLEMVAAFEKASG  171 (208)
Q Consensus       159 ~~e~~~~i~~~~g  171 (208)
                      +.|+++.+.+..+
T Consensus       233 v~el~~~i~~~~~  245 (324)
T TIGR03589       233 ITDLAEAMAPECP  245 (324)
T ss_pred             HHHHHHHHHhhCC
Confidence            9999999998643

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.66  E-value=2.2e-15  Score=133.96  Aligned_cols=156  Identities=21%  Similarity=0.184  Sum_probs=110.3

Q ss_pred             CccCCCCEEEEeccccccCCCCCCCCCCCCC---CCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCC
Q 028478            1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFP---LEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGK   77 (208)
Q Consensus         1 a~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~---~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~   77 (208)
                      |++.++++||++||..+||.... +.+|+..   ..+.+.|+.+|..+|++++.   .. +++++++||++|||+...+.
T Consensus       112 a~~~~~~~~v~~SS~~v~g~~~~-~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~---~~-g~~~~ilRp~~v~G~~~~g~  186 (657)
T PRK07201        112 AERLQAATFHHVSSIAVAGDYEG-VFREDDFDEGQGLPTPYHRTKFEAEKLVRE---EC-GLPWRVYRPAVVVGDSRTGE  186 (657)
T ss_pred             HHhcCCCeEEEEeccccccCccC-ccccccchhhcCCCCchHHHHHHHHHHHHH---cC-CCcEEEEcCCeeeecCCCCc
Confidence            35668899999999999985432 3455542   23457899999999999974   23 89999999999999853221


Q ss_pred             CCCCCCCC-CCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           78 IGEDPRGI-PNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        78 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                      .   .... ...+..++.... .....+++.+      .+...++++|++|+++++..+++.+   ...+++||++++++
T Consensus       187 ~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~------~~~~~~~~v~vddva~ai~~~~~~~---~~~g~~~ni~~~~~  253 (657)
T PRK07201        187 M---DKIDGPYYFFKVLAKLA-KLPSWLPMVG------PDGGRTNIVPVDYVADALDHLMHKD---GRDGQTFHLTDPKP  253 (657)
T ss_pred             c---ccCCcHHHHHHHHHHhc-cCCccccccc------CCCCeeeeeeHHHHHHHHHHHhcCc---CCCCCEEEeCCCCC
Confidence            1   1100 011223333331 1111233444      4566789999999999999998763   34568999999999


Q ss_pred             cCHHHHHHHHHHHhCCCc
Q 028478          157 TSVLEMVAAFEKASGKVH  174 (208)
Q Consensus       157 ~s~~e~~~~i~~~~g~~~  174 (208)
                      +++.|+++.+.+.+|.+.
T Consensus       254 ~s~~el~~~i~~~~g~~~  271 (657)
T PRK07201        254 QRVGDIYNAFARAAGAPP  271 (657)
T ss_pred             CcHHHHHHHHHHHhCCCc
Confidence            999999999999999876

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.64  E-value=6e-15  Score=121.75  Aligned_cols=154  Identities=18%  Similarity=0.182  Sum_probs=107.4

Q ss_pred             ccCCCCEEEEeccccccCCCCCCCCCCCCCC-----CCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWPKVVPCTEEFPL-----EAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSG   76 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~-----~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~   76 (208)
                      .+.++++|+++||.++|+.....+..|+++.     .+.+.|+.+|+.+|.+++.+.+.  +++++++||+.++|+...+
T Consensus       124 ~~~~~~~~v~iSS~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~--g~~~~i~Rpg~v~G~~~~g  201 (367)
T TIGR01746       124 ASGRAKPLHYVSTISVLAAIDLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASDR--GLPVTIVRPGRILGNSYTG  201 (367)
T ss_pred             hhCCCceEEEEccccccCCcCCCCccccccccccccccCCChHHHHHHHHHHHHHHHhc--CCCEEEECCCceeecCCCC
Confidence            4567888999999999975333223344332     23468999999999999988665  8999999999999974332


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCc-ceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           77 KIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGT-GVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                      .+.     ..+.+..++......+     .++      ... ..++++|++|+|++++.++..+... ..+++||++++.
T Consensus       202 ~~~-----~~~~~~~~~~~~~~~~-----~~p------~~~~~~~~~~~vddva~ai~~~~~~~~~~-~~~~~~~v~~~~  264 (367)
T TIGR01746       202 AIN-----SSDILWRMVKGCLALG-----AYP------DSPELTEDLTPVDYVARAIVALSSQPAAS-AGGPVFHVVNPE  264 (367)
T ss_pred             CCC-----chhHHHHHHHHHHHhC-----CCC------CCCccccCcccHHHHHHHHHHHHhCCCcc-cCCceEEecCCC
Confidence            211     1122222333333322     122      233 3578999999999999998873210 126899999999


Q ss_pred             CcCHHHHHHHHHHHhCCCce
Q 028478          156 GTSVLEMVAAFEKASGKVHI  175 (208)
Q Consensus       156 ~~s~~e~~~~i~~~~g~~~~  175 (208)
                      ++++.|+++.+.+ +|.+.+
T Consensus       265 ~~s~~e~~~~i~~-~g~~~~  283 (367)
T TIGR01746       265 PVSLDEFLEWLER-AGYNLK  283 (367)
T ss_pred             CCCHHHHHHHHHH-cCCCCC
Confidence            9999999999999 888765

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PLN02778 3,5-epimerase/4-reductase

Probab=99.63  E-value=3.6e-15  Score=120.65  Aligned_cols=137  Identities=15%  Similarity=0.210  Sum_probs=98.7

Q ss_pred             CccCCCCEEEEeccccccCCCC------CCCCCCCCCCC-CCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCC
Q 028478            1 MAAHGCKNLVFSSSATVYGWPK------VVPCTEEFPLE-AMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAH   73 (208)
Q Consensus         1 a~~~~vk~~i~~SS~~vyg~~~------~~~~~E~~~~~-p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~   73 (208)
                      |++.|++ ++++||.++|+...      ..+++|+++.. |.+.|+.+|.++|.++..+.      +..++|+...+|..
T Consensus        98 a~~~gv~-~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~s~Yg~sK~~~E~~~~~y~------~~~~lr~~~~~~~~  170 (298)
T PLN02778         98 CRERGLV-LTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYE------NVCTLRVRMPISSD  170 (298)
T ss_pred             HHHhCCC-EEEEecceEeCCCCCCCcccCCCCCcCCCCCCCCCchHHHHHHHHHHHHHhh------ccEEeeecccCCcc
Confidence            4567885 56678778886322      22467766554 45899999999999999874      24577887777752


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecC
Q 028478           74 PSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGT  153 (208)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~  153 (208)
                      .         .   ....++.++..+.  ++...+           ++|+|++|++++++.+++.    +. +++||+++
T Consensus       171 ~---------~---~~~~fi~~~~~~~--~~~~~~-----------~s~~yv~D~v~al~~~l~~----~~-~g~yNigs  220 (298)
T PLN02778        171 L---------S---NPRNFITKITRYE--KVVNIP-----------NSMTILDELLPISIEMAKR----NL-TGIYNFTN  220 (298)
T ss_pred             c---------c---cHHHHHHHHHcCC--CeeEcC-----------CCCEEHHHHHHHHHHHHhC----CC-CCeEEeCC
Confidence            0         0   0111456666665  333332           3799999999999999976    23 37999999


Q ss_pred             CCCcCHHHHHHHHHHHhCCCc
Q 028478          154 GKGTSVLEMVAAFEKASGKVH  174 (208)
Q Consensus       154 ~~~~s~~e~~~~i~~~~g~~~  174 (208)
                      +..+|+.|+++.+.+.+|...
T Consensus       221 ~~~iS~~el~~~i~~~~~~~~  241 (298)
T PLN02778        221 PGVVSHNEILEMYRDYIDPSF  241 (298)
T ss_pred             CCcccHHHHHHHHHHHhCCCc
Confidence            999999999999999999753

>PLN02583 cinnamoyl-CoA reductase

Probab=99.63  E-value=3.7e-15  Score=120.53  Aligned_cols=136  Identities=15%  Similarity=0.040  Sum_probs=96.9

Q ss_pred             CCCEEEEecccccc--CCC---CCCCCCCCCCCCCC------ChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCC
Q 028478            5 GCKNLVFSSSATVY--GWP---KVVPCTEEFPLEAM------NPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAH   73 (208)
Q Consensus         5 ~vk~~i~~SS~~vy--g~~---~~~~~~E~~~~~p~------~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~   73 (208)
                      +++++|++||...+  +..   ...+++|+++..+.      ..|+.+|.++|++++.+.+.+ +++++++||++||||.
T Consensus       119 ~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~~-gi~~v~lrp~~v~Gp~  197 (297)
T PLN02583        119 TIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMDR-GVNMVSINAGLLMGPS  197 (297)
T ss_pred             CccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHHh-CCcEEEEcCCcccCCC
Confidence            68899999998764  311   12357777653322      379999999999999998777 9999999999999984


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecC
Q 028478           74 PSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGT  153 (208)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~  153 (208)
                      ..      ...          ....+.   ....+      ++  .++|+||+|+|++++++++.+    ..++.|++++
T Consensus       198 ~~------~~~----------~~~~~~---~~~~~------~~--~~~~v~V~Dva~a~~~al~~~----~~~~r~~~~~  246 (297)
T PLN02583        198 LT------QHN----------PYLKGA---AQMYE------NG--VLVTVDVNFLVDAHIRAFEDV----SSYGRYLCFN  246 (297)
T ss_pred             CC------Cch----------hhhcCC---cccCc------cc--CcceEEHHHHHHHHHHHhcCc----ccCCcEEEec
Confidence            21      100          112222   12222      22  457999999999999999973    3335798887


Q ss_pred             CCCcCHHHHHHHHHHHhCC
Q 028478          154 GKGTSVLEMVAAFEKASGK  172 (208)
Q Consensus       154 ~~~~s~~e~~~~i~~~~g~  172 (208)
                      +....+.++++++.+.++.
T Consensus       247 ~~~~~~~~~~~~~~~~~p~  265 (297)
T PLN02583        247 HIVNTEEDAVKLAQMLSPL  265 (297)
T ss_pred             CCCccHHHHHHHHHHhCCC
Confidence            6655678899999997764

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.60  E-value=1.3e-14  Score=121.49  Aligned_cols=133  Identities=22%  Similarity=0.160  Sum_probs=104.3

Q ss_pred             CccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCC
Q 028478            1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         1 a~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      |++.|+++||++||.++++              |...|..+|..+|+.++.  ... +++++++||+.+||..       
T Consensus       169 a~~~gv~r~V~iSS~~v~~--------------p~~~~~~sK~~~E~~l~~--~~~-gl~~tIlRp~~~~~~~-------  224 (390)
T PLN02657        169 GREVGAKHFVLLSAICVQK--------------PLLEFQRAKLKFEAELQA--LDS-DFTYSIVRPTAFFKSL-------  224 (390)
T ss_pred             HHHcCCCEEEEEeeccccC--------------cchHHHHHHHHHHHHHHh--ccC-CCCEEEEccHHHhccc-------
Confidence            3567899999999987763              244688999999999876  234 8999999999999841       


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCccee-eeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCC-CCcC
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVR-DYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTG-KGTS  158 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~-~~~s  158 (208)
                               ..++..+..++  ++.++|      +|+..+ ++||++|+|+++..+++++   ...+++||++++ +.+|
T Consensus       225 ---------~~~~~~~~~g~--~~~~~G------dG~~~~~~~I~v~DlA~~i~~~~~~~---~~~~~~~~Iggp~~~~S  284 (390)
T PLN02657        225 ---------GGQVEIVKDGG--PYVMFG------DGKLCACKPISEADLASFIADCVLDE---SKINKVLPIGGPGKALT  284 (390)
T ss_pred             ---------HHHHHhhccCC--ceEEec------CCcccccCceeHHHHHHHHHHHHhCc---cccCCEEEcCCCCcccC
Confidence                     11344444555  677788      888766 5799999999999999763   234599999985 6899


Q ss_pred             HHHHHHHHHHHhCCCceEE
Q 028478          159 VLEMVAAFEKASGKVHIFA  177 (208)
Q Consensus       159 ~~e~~~~i~~~~g~~~~~~  177 (208)
                      +.|+++.+.+.+|.++++.
T Consensus       285 ~~Eia~~l~~~lG~~~~~~  303 (390)
T PLN02657        285 PLEQGEMLFRILGKEPKFF  303 (390)
T ss_pred             HHHHHHHHHHHhCCCCceE
Confidence            9999999999999876654

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.60  E-value=3.3e-14  Score=113.94  Aligned_cols=148  Identities=16%  Similarity=0.120  Sum_probs=107.6

Q ss_pred             CccCC-CCEEEEeccccccCC-----CCCCCCCCCCCCC------CCChHHHhHHHHHHHHHHHhhcCCCccEEEEeccc
Q 028478            1 MAAHG-CKNLVFSSSATVYGW-----PKVVPCTEEFPLE------AMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFN   68 (208)
Q Consensus         1 a~~~~-vk~~i~~SS~~vyg~-----~~~~~~~E~~~~~------p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~   68 (208)
                      |++.+ |||+||+||..+-..     .....++|+.-..      ....|..+|..+|+..++|+++. +++.+.+-|+.
T Consensus       115 c~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e~-~~~lv~inP~l  193 (327)
T KOG1502|consen  115 CKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKLWYALSKTLAEKAAWEFAKEN-GLDLVTINPGL  193 (327)
T ss_pred             HhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHHHHHHHHHHHHHHHHHHHHhC-CccEEEecCCc
Confidence            34555 999999999765432     1223567766432      23589999999999999999998 99999999999


Q ss_pred             ccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCce
Q 028478           69 PVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEV  148 (208)
Q Consensus        69 i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~  148 (208)
                      |+||...      +  ..+.....+.+.++|...   ..        ......|+||+|+|.+++.+++.+    ...+.
T Consensus       194 V~GP~l~------~--~l~~s~~~~l~~i~G~~~---~~--------~n~~~~~VdVrDVA~AHv~a~E~~----~a~GR  250 (327)
T KOG1502|consen  194 VFGPGLQ------P--SLNSSLNALLKLIKGLAE---TY--------PNFWLAFVDVRDVALAHVLALEKP----SAKGR  250 (327)
T ss_pred             eECCCcc------c--ccchhHHHHHHHHhcccc---cC--------CCCceeeEeHHHHHHHHHHHHcCc----ccCce
Confidence            9998532      1  223334466677777521   11        223445999999999999999995    44478


Q ss_pred             EEecCCCCcCHHHHHHHHHHHhCCC
Q 028478          149 YNLGTGKGTSVLEMVAAFEKASGKV  173 (208)
Q Consensus       149 ~ni~~~~~~s~~e~~~~i~~~~g~~  173 (208)
                      |.+.++. .++.|+++++.+.+..-
T Consensus       251 yic~~~~-~~~~ei~~~l~~~~P~~  274 (327)
T KOG1502|consen  251 YICVGEV-VSIKEIADILRELFPDY  274 (327)
T ss_pred             EEEecCc-ccHHHHHHHHHHhCCCC
Confidence            8776544 66999999999987653

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.60  E-value=6.9e-15  Score=116.71  Aligned_cols=132  Identities=25%  Similarity=0.381  Sum_probs=102.8

Q ss_pred             CccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCC
Q 028478            1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKI   78 (208)
Q Consensus         1 a~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~   78 (208)
                      |.+++|+++|++||..+.              +|.+.||.||..+|.++..+....  .+..++++|+|||.|.+     
T Consensus       115 a~~~~v~~~v~ISTDKAv--------------~PtnvmGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~-----  175 (293)
T PF02719_consen  115 AIEHGVERFVFISTDKAV--------------NPTNVMGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSR-----  175 (293)
T ss_dssp             HHHTT-SEEEEEEECGCS--------------S--SHHHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGT-----
T ss_pred             HHHcCCCEEEEccccccC--------------CCCcHHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCC-----
Confidence            457899999999996544              578999999999999999987653  25799999999999953     


Q ss_pred             CCCCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCc
Q 028478           79 GEDPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGT  157 (208)
Q Consensus        79 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~  157 (208)
                              +++++ |..++.+|+  |+++.       +++-+|-|+.+++++++++.++..    ...+++|.+--|+++
T Consensus       176 --------GSVip~F~~Qi~~g~--PlTvT-------~p~mtRffmti~EAv~Lvl~a~~~----~~~geifvl~mg~~v  234 (293)
T PF02719_consen  176 --------GSVIPLFKKQIKNGG--PLTVT-------DPDMTRFFMTIEEAVQLVLQAAAL----AKGGEIFVLDMGEPV  234 (293)
T ss_dssp             --------TSCHHHHHHHHHTTS--SEEEC-------ETT-EEEEE-HHHHHHHHHHHHHH------TTEEEEE---TCE
T ss_pred             --------CcHHHHHHHHHHcCC--cceeC-------CCCcEEEEecHHHHHHHHHHHHhh----CCCCcEEEecCCCCc
Confidence                    45777 778888887  89886       488899999999999999999998    567799999888999


Q ss_pred             CHHHHHHHHHHHhCC
Q 028478          158 SVLEMVAAFEKASGK  172 (208)
Q Consensus       158 s~~e~~~~i~~~~g~  172 (208)
                      ++.|+++.+.+..|.
T Consensus       235 ~I~dlA~~~i~~~g~  249 (293)
T PF02719_consen  235 KILDLAEAMIELSGL  249 (293)
T ss_dssp             ECCCHHHHHHHHTT-
T ss_pred             CHHHHHHHHHhhccc
Confidence            999999999999985

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.59  E-value=1.9e-14  Score=117.41  Aligned_cols=132  Identities=15%  Similarity=0.115  Sum_probs=98.3

Q ss_pred             CccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCC
Q 028478            1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         1 a~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      |+++|+++||++||.....             .+.++|..+|..+|+.++..     +++++++||+.+|+..       
T Consensus        97 a~~~gvkr~I~~Ss~~~~~-------------~~~~~~~~~K~~~e~~l~~~-----~l~~tilRp~~~~~~~-------  151 (317)
T CHL00194         97 AKAAKIKRFIFFSILNAEQ-------------YPYIPLMKLKSDIEQKLKKS-----GIPYTIFRLAGFFQGL-------  151 (317)
T ss_pred             HHHcCCCEEEEeccccccc-------------cCCChHHHHHHHHHHHHHHc-----CCCeEEEeecHHhhhh-------
Confidence            4578999999999853321             01346889999999988643     8999999999888631       


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHH
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVL  160 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~  160 (208)
                              +-.+......+.  ++.+.       .+.+.++|+|++|+|+++..+++++   ...+++||+++++.+|+.
T Consensus       152 --------~~~~~~~~~~~~--~~~~~-------~~~~~~~~i~v~Dva~~~~~~l~~~---~~~~~~~ni~g~~~~s~~  211 (317)
T CHL00194        152 --------ISQYAIPILEKQ--PIWIT-------NESTPISYIDTQDAAKFCLKSLSLP---ETKNKTFPLVGPKSWNSS  211 (317)
T ss_pred             --------hhhhhhhhccCC--ceEec-------CCCCccCccCHHHHHHHHHHHhcCc---cccCcEEEecCCCccCHH
Confidence                    000112222333  45543       3667789999999999999999874   245699999999999999


Q ss_pred             HHHHHHHHHhCCCceEE
Q 028478          161 EMVAAFEKASGKVHIFA  177 (208)
Q Consensus       161 e~~~~i~~~~g~~~~~~  177 (208)
                      |+++.+.+.+|.+.++.
T Consensus       212 el~~~~~~~~g~~~~~~  228 (317)
T CHL00194        212 EIISLCEQLSGQKAKIS  228 (317)
T ss_pred             HHHHHHHHHhCCCCeEE
Confidence            99999999999976654

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.57  E-value=1.1e-13  Score=117.08  Aligned_cols=131  Identities=24%  Similarity=0.377  Sum_probs=113.8

Q ss_pred             CccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCC--CccEEEEecccccCCCCCCCC
Q 028478            1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDS--EWKIILLRYFNPVGAHPSGKI   78 (208)
Q Consensus         1 a~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~iiR~~~i~G~~~~~~~   78 (208)
                      |.++||+++|.+||..              ..+|.|.||.+|..+|.++.++++...  +..++++|+|||.|.+     
T Consensus       363 a~~~~V~~~V~iSTDK--------------AV~PtNvmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSr-----  423 (588)
T COG1086         363 AIKNGVKKFVLISTDK--------------AVNPTNVMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSR-----  423 (588)
T ss_pred             HHHhCCCEEEEEecCc--------------ccCCchHhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCC-----
Confidence            4678999999999953              346789999999999999999987542  3899999999999963     


Q ss_pred             CCCCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCc
Q 028478           79 GEDPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGT  157 (208)
Q Consensus        79 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~  157 (208)
                              +++++ +-.++.+|+  |+++.       +++-+|-|+.+.|++++++.+...    ..+|++|-+--|+++
T Consensus       424 --------GSViPlFk~QI~~Gg--plTvT-------dp~mtRyfMTI~EAv~LVlqA~a~----~~gGeifvldMGepv  482 (588)
T COG1086         424 --------GSVIPLFKKQIAEGG--PLTVT-------DPDMTRFFMTIPEAVQLVLQAGAI----AKGGEIFVLDMGEPV  482 (588)
T ss_pred             --------CCCHHHHHHHHHcCC--Ccccc-------CCCceeEEEEHHHHHHHHHHHHhh----cCCCcEEEEcCCCCe
Confidence                    46788 667787776  88886       688899999999999999999988    678899999889999


Q ss_pred             CHHHHHHHHHHHhC
Q 028478          158 SVLEMVAAFEKASG  171 (208)
Q Consensus       158 s~~e~~~~i~~~~g  171 (208)
                      ++.|+++.+.+..|
T Consensus       483 kI~dLAk~mi~l~g  496 (588)
T COG1086         483 KIIDLAKAMIELAG  496 (588)
T ss_pred             EHHHHHHHHHHHhC
Confidence            99999999999997

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.55  E-value=1.1e-13  Score=107.62  Aligned_cols=146  Identities=21%  Similarity=0.226  Sum_probs=107.5

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGEDP   82 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~~~   82 (208)
                      +.+.+.+|..|.+..||......++|+++.. .+.-+..=..-|+....+...  +.+++++|.|+|.|+.         
T Consensus       100 ~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g-~~Fla~lc~~WE~~a~~a~~~--gtRvvllRtGvVLs~~---------  167 (297)
T COG1090         100 ETKPKVLISASAVGYYGHSGDRVVTEESPPG-DDFLAQLCQDWEEEALQAQQL--GTRVVLLRTGVVLSPD---------  167 (297)
T ss_pred             cCCCcEEEecceEEEecCCCceeeecCCCCC-CChHHHHHHHHHHHHhhhhhc--CceEEEEEEEEEecCC---------
Confidence            5567788888999999988888899995433 344333334445555554333  7899999999999973         


Q ss_pred             CCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHHHH
Q 028478           83 RGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEM  162 (208)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~  162 (208)
                      .+.-..+.+.+ +...|+  +   +|      +|.|+.+|||++|+++++..++++.    ...+.||++++.|++..++
T Consensus       168 GGaL~~m~~~f-k~glGG--~---~G------sGrQ~~SWIhieD~v~~I~fll~~~----~lsGp~N~taP~PV~~~~F  231 (297)
T COG1090         168 GGALGKMLPLF-KLGLGG--K---LG------SGRQWFSWIHIEDLVNAILFLLENE----QLSGPFNLTAPNPVRNKEF  231 (297)
T ss_pred             Ccchhhhcchh-hhccCC--c---cC------CCCceeeeeeHHHHHHHHHHHHhCc----CCCCcccccCCCcCcHHHH
Confidence            22222222222 333333  2   36      8999999999999999999999993    4448999999999999999


Q ss_pred             HHHHHHHhCCCceE
Q 028478          163 VAAFEKASGKVHIF  176 (208)
Q Consensus       163 ~~~i~~~~g~~~~~  176 (208)
                      ...+.+.++++..+
T Consensus       232 ~~al~r~l~RP~~~  245 (297)
T COG1090         232 AHALGRALHRPAIL  245 (297)
T ss_pred             HHHHHHHhCCCccc
Confidence            99999999987543

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.43  E-value=2.6e-12  Score=122.81  Aligned_cols=153  Identities=14%  Similarity=0.089  Sum_probs=106.3

Q ss_pred             ccCCCCEEEEeccccccCCCC------------CCCCCCCCCC-----CCCChHHHhHHHHHHHHHHHhhcCCCccEEEE
Q 028478            2 AAHGCKNLVFSSSATVYGWPK------------VVPCTEEFPL-----EAMNPYGRTKLFIEEICRDVHRSDSEWKIILL   64 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~------------~~~~~E~~~~-----~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ii   64 (208)
                      ++.++++|+|+||.++|+...            ...+.|+...     .+.+.|+.+|+++|.++..+.+.  +++++++
T Consensus      1097 ~~~~~~~~v~vSS~~v~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~--g~~~~i~ 1174 (1389)
T TIGR03443      1097 AEGKAKQFSFVSSTSALDTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKR--GLRGCIV 1174 (1389)
T ss_pred             HhCCCceEEEEeCeeecCcccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHhC--CCCEEEE
Confidence            456788999999999996321            1123444322     23467999999999999988664  8999999


Q ss_pred             ecccccCCCCCCCCCCCCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCC
Q 028478           65 RYFNPVGAHPSGKIGEDPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPK  143 (208)
Q Consensus        65 R~~~i~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~  143 (208)
                      ||++|||+..++..      ....++. ++......     ..++      ++...++|++++|+|++++.++.++.. .
T Consensus      1175 Rpg~v~G~~~~g~~------~~~~~~~~~~~~~~~~-----~~~p------~~~~~~~~~~Vddva~ai~~~~~~~~~-~ 1236 (1389)
T TIGR03443      1175 RPGYVTGDSKTGAT------NTDDFLLRMLKGCIQL-----GLIP------NINNTVNMVPVDHVARVVVAAALNPPK-E 1236 (1389)
T ss_pred             CCCccccCCCcCCC------CchhHHHHHHHHHHHh-----CCcC------CCCCccccccHHHHHHHHHHHHhCCcc-c
Confidence            99999998543321      1223333 33332221     2223      455679999999999999999876311 1


Q ss_pred             CCCceEEecCCCCcCHHHHHHHHHHHhCCCce
Q 028478          144 IGCEVYNLGTGKGTSVLEMVAAFEKASGKVHI  175 (208)
Q Consensus       144 ~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~  175 (208)
                      ..+.+||++++..+++.++++.+.+. |.+.+
T Consensus      1237 ~~~~i~~~~~~~~~~~~~~~~~l~~~-g~~~~ 1267 (1389)
T TIGR03443      1237 SELAVAHVTGHPRIRFNDFLGTLKTY-GYDVE 1267 (1389)
T ss_pred             CCCCEEEeCCCCCCcHHHHHHHHHHh-CCCCC
Confidence            23468999999899999999999764 66543

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=99.41  E-value=3.5e-12  Score=97.12  Aligned_cols=153  Identities=13%  Similarity=0.093  Sum_probs=118.3

Q ss_pred             CccCCCCEEEEeccccccCCCCC-CCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCC
Q 028478            1 MAAHGCKNLVFSSSATVYGWPKV-VPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIG   79 (208)
Q Consensus         1 a~~~~vk~~i~~SS~~vyg~~~~-~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~   79 (208)
                      |++++. ++...||+..||+... .|...-+-.+|.+.||.||+.+|.+-+.+..++ ++++..+|++.+.....     
T Consensus       147 Aa~~kL-~iFVPSTIGAFGPtSPRNPTPdltIQRPRTIYGVSKVHAEL~GEy~~hrF-g~dfr~~rfPg~is~~~-----  219 (366)
T KOG2774|consen  147 AAKHKL-KVFVPSTIGAFGPTSPRNPTPDLTIQRPRTIYGVSKVHAELLGEYFNHRF-GVDFRSMRFPGIISATK-----  219 (366)
T ss_pred             HHHcCe-eEeecccccccCCCCCCCCCCCeeeecCceeechhHHHHHHHHHHHHhhc-CccceecccCcccccCC-----
Confidence            345667 7788999999996443 344445566789999999999999999999998 99999999999998643     


Q ss_pred             CCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCH
Q 028478           80 EDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSV  159 (208)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~  159 (208)
                       ...+..+..+..+..++..++-...+        .+++...++|.+|+.++++..+..+. .....++||+. +.+++-
T Consensus       220 -pgggttdya~A~f~~Al~~gk~tCyl--------rpdtrlpmmy~~dc~~~~~~~~~a~~-~~lkrr~ynvt-~~sftp  288 (366)
T KOG2774|consen  220 -PGGGTTDYAIAIFYDALQKGKHTCYL--------RPDTRLPMMYDTDCMASVIQLLAADS-QSLKRRTYNVT-GFSFTP  288 (366)
T ss_pred             -CCCCcchhHHHHHHHHHHcCCccccc--------CCCccCceeehHHHHHHHHHHHhCCH-HHhhhheeeec-eeccCH
Confidence             23445566777666666655333333        57888899999999999999888742 23556899997 678999


Q ss_pred             HHHHHHHHHHhC
Q 028478          160 LEMVAAFEKASG  171 (208)
Q Consensus       160 ~e~~~~i~~~~g  171 (208)
                      +|+++.+.+.+.
T Consensus       289 ee~~~~~~~~~p  300 (366)
T KOG2774|consen  289 EEIADAIRRVMP  300 (366)
T ss_pred             HHHHHHHHhhCC
Confidence            999999998753

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.37  E-value=1.1e-11  Score=108.22  Aligned_cols=123  Identities=17%  Similarity=0.173  Sum_probs=90.7

Q ss_pred             ChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCeeE-EEccccCCC
Q 028478           36 NPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELT-VFGTDYSTK  114 (208)
Q Consensus        36 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  114 (208)
                      +.|..+|.++|++++++..   +++++|+||+.|.+.......|+.++..  ...+.+....+|.   +. +.+      
T Consensus       348 NtYt~TK~lAE~lV~~~~~---~LPv~IvRPsiV~st~~eP~pGw~d~~~--~~~p~~~~~g~G~---lr~~~~------  413 (605)
T PLN02503        348 DTYVFTKAMGEMVINSMRG---DIPVVIIRPSVIESTWKDPFPGWMEGNR--MMDPIVLYYGKGQ---LTGFLA------  413 (605)
T ss_pred             ChHHHHHHHHHHHHHHhcC---CCCEEEEcCCEecccccCCccccccCcc--ccchhhhheeccc---eeEEEe------
Confidence            6899999999999997643   7999999999997766555556555421  1222332333443   33 556      


Q ss_pred             CCcceeeeeeHHHHHHHHHHHhhhcC-CCCCCCceEEecCC--CCcCHHHHHHHHHHHhCC
Q 028478          115 DGTGVRDYIHVIDLADGHIAALHKLD-DPKIGCEVYNLGTG--KGTSVLEMVAAFEKASGK  172 (208)
Q Consensus       115 ~~~~~~~~i~v~D~a~~~~~~~~~~~-~~~~~~~~~ni~~~--~~~s~~e~~~~i~~~~g~  172 (208)
                      +++...|+++||.++.+++.++.... .....+.+||++++  .++++.++.+.+.+.+..
T Consensus       414 ~~~~~~DiVPVD~vvna~i~a~a~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~  474 (605)
T PLN02503        414 DPNGVLDVVPADMVVNATLAAMAKHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYKS  474 (605)
T ss_pred             CCCeeEeEEeecHHHHHHHHHHHhhhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhh
Confidence            88999999999999999999954321 11234689999988  899999999999887654

>PRK05865 hypothetical protein; Provisional

Probab=99.32  E-value=1.5e-11  Score=110.73  Aligned_cols=112  Identities=21%  Similarity=0.194  Sum_probs=83.7

Q ss_pred             CccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCC
Q 028478            1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         1 a~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      |++.++++||++||..                         |.++|+++..    + +++++++||+++||+..      
T Consensus        90 a~~~gvkr~V~iSS~~-------------------------K~aaE~ll~~----~-gl~~vILRp~~VYGP~~------  133 (854)
T PRK05865         90 MAETGTGRIVFTSSGH-------------------------QPRVEQMLAD----C-GLEWVAVRCALIFGRNV------  133 (854)
T ss_pred             HHHcCCCeEEEECCcH-------------------------HHHHHHHHHH----c-CCCEEEEEeceEeCCCh------
Confidence            3567888999999852                         8889988864    3 89999999999999731      


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHH
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVL  160 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~  160 (208)
                               ..++.+... .  ++...|      ++.+.++|+|++|+|+++..+++..   ...+++||+++++.+|+.
T Consensus       134 ---------~~~i~~ll~-~--~v~~~G------~~~~~~dfIhVdDVA~Ai~~aL~~~---~~~ggvyNIgsg~~~Si~  192 (854)
T PRK05865        134 ---------DNWVQRLFA-L--PVLPAG------YADRVVQVVHSDDAQRLLVRALLDT---VIDSGPVNLAAPGELTFR  192 (854)
T ss_pred             ---------HHHHHHHhc-C--ceeccC------CCCceEeeeeHHHHHHHHHHHHhCC---CcCCCeEEEECCCcccHH
Confidence                     113333221 1  232233      4566789999999999999998752   234589999999999999


Q ss_pred             HHHHHHHHH
Q 028478          161 EMVAAFEKA  169 (208)
Q Consensus       161 e~~~~i~~~  169 (208)
                      |+++.+.+.
T Consensus       193 EIae~l~~~  201 (854)
T PRK05865        193 RIAAALGRP  201 (854)
T ss_pred             HHHHHHhhh
Confidence            999998874

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=99.30  E-value=2.5e-11  Score=93.06  Aligned_cols=176  Identities=17%  Similarity=0.154  Sum_probs=129.4

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGEDPR   83 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~~~~   83 (208)
                      .+| ||-..||+..||.....|-.|.+|..|.++|+.+|..+-.++-.|.+.| ++-.+.-.+++.-+|+.      ..+
T Consensus       151 ~~V-rfYQAstSElyGkv~e~PQsE~TPFyPRSPYa~aKmy~~WivvNyREAY-nmfAcNGILFNHESPRR------Gen  222 (376)
T KOG1372|consen  151 EKV-RFYQASTSELYGKVQEIPQSETTPFYPRSPYAAAKMYGYWIVVNYREAY-NMFACNGILFNHESPRR------GEN  222 (376)
T ss_pred             cce-eEEecccHhhcccccCCCcccCCCCCCCChhHHhhhhheEEEEEhHHhh-cceeeccEeecCCCCcc------ccc
Confidence            355 8888999999998788889999999999999999999999999998888 77766666666666631      122


Q ss_pred             CCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHHHHH
Q 028478           84 GIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMV  163 (208)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~  163 (208)
                      -....+..-+.++..|.. .-...|      +.+..|||-|..|-++++...+++.     ....|.|+.++..|++|+.
T Consensus       223 FVTRKItRsvakI~~gqq-e~~~LG------NL~a~RDWGhA~dYVEAMW~mLQ~d-----~PdDfViATge~hsVrEF~  290 (376)
T KOG1372|consen  223 FVTRKITRSVAKISLGQQ-EKIELG------NLSALRDWGHAGDYVEAMWLMLQQD-----SPDDFVIATGEQHSVREFC  290 (376)
T ss_pred             hhhHHHHHHHHHhhhcce-eeEEec------chhhhcccchhHHHHHHHHHHHhcC-----CCCceEEecCCcccHHHHH
Confidence            222333334556666665 334457      7889999999999999999999993     2256889999999999999


Q ss_pred             HHHHHHhCCCceE----------------EEeeeehhccchhhhhhhhhhcc
Q 028478          164 AAFEKASGKVHIF----------------ALFCILFIHRWKLLFRFWIVFCK  199 (208)
Q Consensus       164 ~~i~~~~g~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~k  199 (208)
                      +.-....|....+                .+...+.-.++.+.-.+..|..|
T Consensus       291 ~~aF~~ig~~l~Weg~gv~~~~~n~~g~v~V~v~~kYyRPtEVd~LqGdasK  342 (376)
T KOG1372|consen  291 NLAFAEIGEVLNWEGEGVDEVGKNDDGVVRVKVDPKYYRPTEVDTLQGDASK  342 (376)
T ss_pred             HHHHHhhCcEEeecccccccccccCCceEEEEecccccCcchhhhhcCChHH
Confidence            9988888743322                22233444555555555555554

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.29  E-value=1.7e-11  Score=95.74  Aligned_cols=130  Identities=17%  Similarity=0.194  Sum_probs=101.3

Q ss_pred             CccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCC
Q 028478            1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         1 a~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      |++.||+|||++|+...   .          ....+-|-.+|.++|..+++.   +  -..+|+||..|||..       
T Consensus       164 cke~GVerfIhvS~Lga---n----------v~s~Sr~LrsK~~gE~aVrda---f--PeAtIirPa~iyG~e-------  218 (391)
T KOG2865|consen  164 CKEAGVERFIHVSCLGA---N----------VKSPSRMLRSKAAGEEAVRDA---F--PEATIIRPADIYGTE-------  218 (391)
T ss_pred             HHhhChhheeehhhccc---c----------ccChHHHHHhhhhhHHHHHhh---C--Ccceeechhhhcccc-------
Confidence            68899999999998531   1          233567889999999999975   2  367999999999962       


Q ss_pred             CCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCC-cceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcC
Q 028478           81 DPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDG-TGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTS  158 (208)
Q Consensus        81 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s  158 (208)
                            +.+++ +.....+  ...+++++      .| +++...+||-|+|++++.|++.|+   ..|++|.+.++..+.
T Consensus       219 ------Drfln~ya~~~rk--~~~~pL~~------~GekT~K~PVyV~DVaa~IvnAvkDp~---s~Gktye~vGP~~yq  281 (391)
T KOG2865|consen  219 ------DRFLNYYASFWRK--FGFLPLIG------KGEKTVKQPVYVVDVAAAIVNAVKDPD---SMGKTYEFVGPDRYQ  281 (391)
T ss_pred             ------hhHHHHHHHHHHh--cCceeeec------CCcceeeccEEEehHHHHHHHhccCcc---ccCceeeecCCchhh
Confidence                  34565 3333433  23788887      56 456789999999999999999974   455999999999999


Q ss_pred             HHHHHHHHHHHhCC
Q 028478          159 VLEMVAAFEKASGK  172 (208)
Q Consensus       159 ~~e~~~~i~~~~g~  172 (208)
                      +.|+++++.+....
T Consensus       282 l~eLvd~my~~~~~  295 (391)
T KOG2865|consen  282 LSELVDIMYDMARE  295 (391)
T ss_pred             HHHHHHHHHHHHhh
Confidence            99999999887544

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.26  E-value=7.7e-11  Score=105.28  Aligned_cols=134  Identities=15%  Similarity=0.203  Sum_probs=94.2

Q ss_pred             CccCCCCEEEEeccccccCCC------CCCCCCCCCCCCC-CChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCC
Q 028478            1 MAAHGCKNLVFSSSATVYGWP------KVVPCTEEFPLEA-MNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAH   73 (208)
Q Consensus         1 a~~~~vk~~i~~SS~~vyg~~------~~~~~~E~~~~~p-~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~   73 (208)
                      |++.|+ +++++||.+||+..      ...+++|+++..| .+.||.+|.++|++++.+.      +..++|+.++||..
T Consensus       469 ~~~~g~-~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~~~~Yg~sK~~~E~~~~~~~------~~~~~r~~~~~~~~  541 (668)
T PLN02260        469 CRENGL-LMMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSFYSKTKAMVEELLREYD------NVCTLRVRMPISSD  541 (668)
T ss_pred             HHHcCC-eEEEEcccceecCCcccccccCCCCCcCCCCCCCCChhhHHHHHHHHHHHhhh------hheEEEEEEecccC
Confidence            467788 57788898998631      1246888876655 5899999999999998762      34677888888742


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecC
Q 028478           74 PSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGT  153 (208)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~  153 (208)
                      ..       .  ..+|+.   .+.+... ++.+ +           .+..+++|++.++..+++.     ..+++||+++
T Consensus       542 ~~-------~--~~nfv~---~~~~~~~-~~~v-p-----------~~~~~~~~~~~~~~~l~~~-----~~~giyni~~  591 (668)
T PLN02260        542 LS-------N--PRNFIT---KISRYNK-VVNI-P-----------NSMTVLDELLPISIEMAKR-----NLRGIWNFTN  591 (668)
T ss_pred             CC-------C--ccHHHH---HHhccce-eecc-C-----------CCceehhhHHHHHHHHHHh-----CCCceEEecC
Confidence            10       0  123443   3333331 2332 1           2467788999988888875     2248999999


Q ss_pred             CCCcCHHHHHHHHHHHhC
Q 028478          154 GKGTSVLEMVAAFEKASG  171 (208)
Q Consensus       154 ~~~~s~~e~~~~i~~~~g  171 (208)
                      +..+|+.|+++.|.+.++
T Consensus       592 ~~~~s~~e~a~~i~~~~~  609 (668)
T PLN02260        592 PGVVSHNEILEMYKDYID  609 (668)
T ss_pred             CCcCcHHHHHHHHHHhcC
Confidence            999999999999999874

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.26  E-value=5.4e-11  Score=95.52  Aligned_cols=129  Identities=11%  Similarity=0.037  Sum_probs=88.8

Q ss_pred             CccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCC
Q 028478            1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         1 a~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      |+++|+++||++||..++...                  ..+...|+.++.   .. +++++++||+.+++....     
T Consensus        92 a~~~gv~~~V~~Ss~~~~~~~------------------~~~~~~~~~l~~---~~-gi~~tilRp~~f~~~~~~-----  144 (285)
T TIGR03649        92 ARSKGVRRFVLLSASIIEKGG------------------PAMGQVHAHLDS---LG-GVEYTVLRPTWFMENFSE-----  144 (285)
T ss_pred             HHHcCCCEEEEeeccccCCCC------------------chHHHHHHHHHh---cc-CCCEEEEeccHHhhhhcc-----
Confidence            467899999999986543210                  012234444432   23 899999999988864100     


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHH
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVL  160 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~  160 (208)
                         .   .   ....+..+.  .+ +.+      .++..++|++++|+|+++..++..+   ...++.|++.+++.+|+.
T Consensus       145 ---~---~---~~~~~~~~~--~~-~~~------~g~~~~~~v~~~Dva~~~~~~l~~~---~~~~~~~~l~g~~~~s~~  203 (285)
T TIGR03649       145 ---E---F---HVEAIRKEN--KI-YSA------TGDGKIPFVSADDIARVAYRALTDK---VAPNTDYVVLGPELLTYD  203 (285)
T ss_pred             ---c---c---cccccccCC--eE-Eec------CCCCccCcccHHHHHHHHHHHhcCC---CcCCCeEEeeCCccCCHH
Confidence               0   0   111122222  33 234      5777899999999999999999874   234588999999999999


Q ss_pred             HHHHHHHHHhCCCceEE
Q 028478          161 EMVAAFEKASGKVHIFA  177 (208)
Q Consensus       161 e~~~~i~~~~g~~~~~~  177 (208)
                      |+++.+.+.+|++++..
T Consensus       204 eia~~l~~~~g~~v~~~  220 (285)
T TIGR03649       204 DVAEILSRVLGRKITHV  220 (285)
T ss_pred             HHHHHHHHHhCCceEEE
Confidence            99999999999987654

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]

Probab=99.23  E-value=1.3e-10  Score=88.01  Aligned_cols=140  Identities=20%  Similarity=0.150  Sum_probs=104.5

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGEDPRGIP   86 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~~~~~~~   86 (208)
                      +..|.+|..++|-+.....++|+++....+.....-..-|......  .. ..+++++|.|.|.|.+         .+..
T Consensus       123 ~~~Vlv~gva~y~pS~s~eY~e~~~~qgfd~~srL~l~WE~aA~~~--~~-~~r~~~iR~GvVlG~g---------GGa~  190 (315)
T KOG3019|consen  123 RPTVLVSGVAVYVPSESQEYSEKIVHQGFDILSRLCLEWEGAALKA--NK-DVRVALIRIGVVLGKG---------GGAL  190 (315)
T ss_pred             CCeEEEEeeEEeccccccccccccccCChHHHHHHHHHHHHHhhcc--Cc-ceeEEEEEEeEEEecC---------Ccch
Confidence            4688999999998777777999998888776554333333333322  22 5899999999999973         2222


Q ss_pred             CChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHHHHHHHH
Q 028478           87 NNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAF  166 (208)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i  166 (208)
                      .+++..+ +.-.|+  |+   |      +|+|+.+|||++|++.++..+++++    ...++.|-..+++.+..|+.+.+
T Consensus       191 ~~M~lpF-~~g~GG--Pl---G------sG~Q~fpWIHv~DL~~li~~ale~~----~v~GViNgvAP~~~~n~Ef~q~l  254 (315)
T KOG3019|consen  191 AMMILPF-QMGAGG--PL---G------SGQQWFPWIHVDDLVNLIYEALENP----SVKGVINGVAPNPVRNGEFCQQL  254 (315)
T ss_pred             hhhhhhh-hhccCC--cC---C------CCCeeeeeeehHHHHHHHHHHHhcC----CCCceecccCCCccchHHHHHHH
Confidence            2223222 333454  55   4      8999999999999999999999994    55589999999999999999999


Q ss_pred             HHHhCCCc
Q 028478          167 EKASGKVH  174 (208)
Q Consensus       167 ~~~~g~~~  174 (208)
                      .++++++.
T Consensus       255 g~aL~Rp~  262 (315)
T KOG3019|consen  255 GSALSRPS  262 (315)
T ss_pred             HHHhCCCc
Confidence            99998874

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.18  E-value=3.1e-11  Score=95.23  Aligned_cols=116  Identities=19%  Similarity=0.132  Sum_probs=61.8

Q ss_pred             ccCCCCEEEEeccccccCCCCCCCCCC-------C---CCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccC
Q 028478            2 AAHGCKNLVFSSSATVYGWPKVVPCTE-------E---FPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVG   71 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~~~~~~E-------~---~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G   71 (208)
                      .+.+.++|+|+||+.+.+.... ...|       .   ......+.|..||+.+|++++++.++. +++++|+||+.|+|
T Consensus       123 ~~~~~~~~~~iSTa~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~-g~p~~I~Rp~~i~g  200 (249)
T PF07993_consen  123 AQGKRKRFHYISTAYVAGSRPG-TIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRH-GLPVTIYRPGIIVG  200 (249)
T ss_dssp             TSSS---EEEEEEGGGTTS-TT-T--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH----EEEEEE-EEE-
T ss_pred             HhccCcceEEeccccccCCCCC-cccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhcC-CceEEEEecCcccc
Confidence            3455669999999656554332 1111       1   122345689999999999999999887 89999999999999


Q ss_pred             CCCCCCCCCCCCCCCCChHHHHHHHHhCCCCeeE-EEccccCCCCCcceeeeeeHHHHHHHH
Q 028478           72 AHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELT-VFGTDYSTKDGTGVRDYIHVIDLADGH  132 (208)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~~  132 (208)
                      ...++.+   .  ..+.+..++......+  .++ ..+      +.+...|+++||.+|++|
T Consensus       201 ~~~~G~~---~--~~~~~~~~~~~~~~~~--~~p~~~~------~~~~~~d~vPVD~va~aI  249 (249)
T PF07993_consen  201 DSRTGWW---N--SDDFFPYLLRSCIALG--AFPDLPG------DPDARLDLVPVDYVARAI  249 (249)
T ss_dssp             SSSSS--------TTBHHHHHHHHHHHH---EEES-SB---------TT--EEEHHHHHHHH
T ss_pred             cCCCcee---e--ccchHHHHHHHHHHcC--CcccccC------CCCceEeEECHHHHHhhC
Confidence            5433322   1  1122444444433333  222 333      445569999999999986

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.17  E-value=3.3e-11  Score=97.89  Aligned_cols=148  Identities=19%  Similarity=0.146  Sum_probs=90.6

Q ss_pred             cCCCCEEEEeccccccCCCCC----CCCCCCCCC-----CCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKV----VPCTEEFPL-----EAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAH   73 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~----~~~~E~~~~-----~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~   73 (208)
                      ..+.|.++|+||++|+.....    ...+|.++.     .+.+.|+.||+++|.+++...+.  |++++|+|||+|.|..
T Consensus       124 ~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~r--GLpv~I~Rpg~I~gds  201 (382)
T COG3320         124 TGKPKPLHYVSSISVGETEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGDR--GLPVTIFRPGYITGDS  201 (382)
T ss_pred             cCCCceeEEEeeeeeccccccCCCccccccccccccccCccCCCcchhHHHHHHHHHHHhhc--CCCeEEEecCeeeccC
Confidence            456888999999999864322    122222222     35679999999999999999887  8999999999999986


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcC--------CCCCC
Q 028478           74 PSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLD--------DPKIG  145 (208)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--------~~~~~  145 (208)
                      ..|.+..     .+.+..++...+.-+     .++      +.....+++.++.+++++......+.        .+...
T Consensus       202 ~tG~~n~-----~D~~~Rlv~~~~~lg-----~~P------~~~~~~~~~p~~~v~~~v~~~~~~~~~~~~~l~~~~~~~  265 (382)
T COG3320         202 RTGALNT-----RDFLTRLVLGLLQLG-----IAP------DSEYSLDMLPVDHVARAVVAPSVQVAEAIAALGAHSDIR  265 (382)
T ss_pred             ccCcccc-----chHHHHHHHHHHHhC-----CCC------CcccchhhCccceeeEEeehhhhhHHHHHHHhccCccch
Confidence            5443322     234444444444333     122      33444455554444443333222211        11222


Q ss_pred             CceEE-ecCCCCcCHHHHHHHHHH
Q 028478          146 CEVYN-LGTGKGTSVLEMVAAFEK  168 (208)
Q Consensus       146 ~~~~n-i~~~~~~s~~e~~~~i~~  168 (208)
                      ...|+ ...+..+.+.++.+++.+
T Consensus       266 f~~~~~~~~~~~i~l~~~~~w~~~  289 (382)
T COG3320         266 FNQLHMLTHPDEIGLDEYVDWLIS  289 (382)
T ss_pred             hhheecccCCCccchhHHHHhHhh
Confidence            23343 334778999999999888

>PRK12320 hypothetical protein; Provisional

Probab=98.93  E-value=1e-08  Score=90.92  Aligned_cols=112  Identities=22%  Similarity=0.227  Sum_probs=75.4

Q ss_pred             CccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCC
Q 028478            1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         1 a~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      |++.|+ ++||+||.  +|...              .|.    .+|.++..    + .++++++|++++||+...     
T Consensus        90 A~~~Gv-RiV~~SS~--~G~~~--------------~~~----~aE~ll~~----~-~~p~~ILR~~nVYGp~~~-----  138 (699)
T PRK12320         90 AARAGA-RLLFVSQA--AGRPE--------------LYR----QAETLVST----G-WAPSLVIRIAPPVGRQLD-----  138 (699)
T ss_pred             HHHcCC-eEEEEECC--CCCCc--------------ccc----HHHHHHHh----c-CCCEEEEeCceecCCCCc-----
Confidence            456787 79999986  34210              122    46777654    2 689999999999998321     


Q ss_pred             CCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCH
Q 028478           81 DPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSV  159 (208)
Q Consensus        81 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~  159 (208)
                       . . ...++. ++.....++                  ...++|++|++++++.+++.    .. .++||+++++.+|+
T Consensus       139 -~-~-~~r~I~~~l~~~~~~~------------------pI~vIyVdDvv~alv~al~~----~~-~GiyNIG~~~~~Si  192 (699)
T PRK12320        139 -W-M-VCRTVATLLRSKVSAR------------------PIRVLHLDDLVRFLVLALNT----DR-NGVVDLATPDTTNV  192 (699)
T ss_pred             -c-c-HhHHHHHHHHHHHcCC------------------ceEEEEHHHHHHHHHHHHhC----CC-CCEEEEeCCCeeEH
Confidence             1 0 112333 333332222                  22358999999999999986    22 35999999999999


Q ss_pred             HHHHHHHHHH
Q 028478          160 LEMVAAFEKA  169 (208)
Q Consensus       160 ~e~~~~i~~~  169 (208)
                      .|+++.+...
T Consensus       193 ~el~~~i~~~  202 (699)
T PRK12320        193 VTAWRLLRSV  202 (699)
T ss_pred             HHHHHHHHHh
Confidence            9999988765

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=98.88  E-value=2.1e-08  Score=79.16  Aligned_cols=127  Identities=17%  Similarity=0.125  Sum_probs=79.7

Q ss_pred             ccCCCCEEEEeccccccCCCCCCCCCCCC-CCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWPKVVPCTEEF-PLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~~~~~~E~~-~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      ++.++++||++||+.+||.....+..+.. ...+...|..+|..+|++++.    . +++++++||+.+++....     
T Consensus       120 ~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~----~-gi~~~iirpg~~~~~~~~-----  189 (251)
T PLN00141        120 RKAGVTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQAEKYIRK----S-GINYTIVRPGGLTNDPPT-----  189 (251)
T ss_pred             HHcCCCEEEEEccccccCCCcccccCcchhHHHHHHHHHHHHHHHHHHHHh----c-CCcEEEEECCCccCCCCC-----
Confidence            45688999999999999853332222211 111223345578888877764    2 899999999999985210     


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecC---CCCc
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGT---GKGT  157 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~---~~~~  157 (208)
                                        +   .+.+..      .......+++.+|+|+++..++..+.   ..+.++.+.+   +...
T Consensus       190 ------------------~---~~~~~~------~~~~~~~~i~~~dvA~~~~~~~~~~~---~~~~~~~~~~~~~~~~~  239 (251)
T PLN00141        190 ------------------G---NIVMEP------EDTLYEGSISRDQVAEVAVEALLCPE---SSYKVVEIVARADAPKR  239 (251)
T ss_pred             ------------------c---eEEECC------CCccccCcccHHHHHHHHHHHhcChh---hcCcEEEEecCCCCCch
Confidence                              1   111111      11112347999999999999998843   2336677765   2347


Q ss_pred             CHHHHHHHHHH
Q 028478          158 SVLEMVAAFEK  168 (208)
Q Consensus       158 s~~e~~~~i~~  168 (208)
                      ++.++...+.+
T Consensus       240 ~~~~~~~~~~~  250 (251)
T PLN00141        240 SYKDLFASIKQ  250 (251)
T ss_pred             hHHHHHHHhhc
Confidence            78888777653

>PRK06482 short chain dehydrogenase; Provisional

Probab=98.83  E-value=4.8e-08  Score=77.97  Aligned_cols=136  Identities=13%  Similarity=0.004  Sum_probs=88.4

Q ss_pred             ccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhc---CCCccEEEEecccc---cCCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRS---DSEWKIILLRYFNP---VGAHPS   75 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~iiR~~~i---~G~~~~   75 (208)
                      ++.+.+++|++||......           ..+.+.|+.+|.+.|.+++.++.+   + +++++++||+.+   ||+...
T Consensus       123 ~~~~~~~iv~~sS~~~~~~-----------~~~~~~Y~~sK~a~~~~~~~l~~~~~~~-gi~v~~v~pg~~~t~~~~~~~  190 (276)
T PRK06482        123 RRQGGGRIVQVSSEGGQIA-----------YPGFSLYHATKWGIEGFVEAVAQEVAPF-GIEFTIVEPGPARTNFGAGLD  190 (276)
T ss_pred             HhcCCCEEEEEcCcccccC-----------CCCCchhHHHHHHHHHHHHHHHHHhhcc-CcEEEEEeCCccccCCccccc
Confidence            3456779999999644321           124578999999999999888765   4 899999999988   554221


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           76 GKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                      ..  .............+.+....+  ++.               -+.+++|++++++.+++.+    ..+..||++++.
T Consensus       191 ~~--~~~~~~~~~~~~~~~~~~~~~--~~~---------------~~~d~~~~~~a~~~~~~~~----~~~~~~~~g~~~  247 (276)
T PRK06482        191 RG--APLDAYDDTPVGDLRRALADG--SFA---------------IPGDPQKMVQAMIASADQT----PAPRRLTLGSDA  247 (276)
T ss_pred             cc--CCCccccchhhHHHHHHHhhc--cCC---------------CCCCHHHHHHHHHHHHcCC----CCCeEEecChHH
Confidence            00  000000111122233333322  111               1357899999999999872    334679999998


Q ss_pred             CcCHHHHHHHHHHHhCC
Q 028478          156 GTSVLEMVAAFEKASGK  172 (208)
Q Consensus       156 ~~s~~e~~~~i~~~~g~  172 (208)
                      ..++.|++..+.+.++.
T Consensus       248 ~~~~~~~~~~~~~~~~~  264 (276)
T PRK06482        248 YASIRAALSERLAALEA  264 (276)
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            88998888887777654

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=98.76  E-value=2.2e-08  Score=78.09  Aligned_cols=140  Identities=21%  Similarity=0.132  Sum_probs=91.3

Q ss_pred             CccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCC
Q 028478            1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         1 a~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      |+++|||+||+.|....+.        +.....|....-..|...|+.+++.     +++++++|++..+..        
T Consensus        90 a~~agVk~~v~ss~~~~~~--------~~~~~~p~~~~~~~k~~ie~~l~~~-----~i~~t~i~~g~f~e~--------  148 (233)
T PF05368_consen   90 AKAAGVKHFVPSSFGADYD--------ESSGSEPEIPHFDQKAEIEEYLRES-----GIPYTIIRPGFFMEN--------  148 (233)
T ss_dssp             HHHHT-SEEEESEESSGTT--------TTTTSTTHHHHHHHHHHHHHHHHHC-----TSEBEEEEE-EEHHH--------
T ss_pred             hhccccceEEEEEeccccc--------ccccccccchhhhhhhhhhhhhhhc-----cccceeccccchhhh--------
Confidence            4678999999765443331        1112223334446788888877764     899999998876653        


Q ss_pred             CCCCCCCChHHHHHH--HHhCCCCeeEEEccccCCCCCcceeeee-eHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCc
Q 028478           81 DPRGIPNNLMPFVTQ--VAVGRRPELTVFGTDYSTKDGTGVRDYI-HVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGT  157 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~  157 (208)
                              +...+..  ...+....+.+.+      +++....++ +.+|++++...++..|... ..++.+.+++ +.+
T Consensus       149 --------~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~Dvg~~va~il~~p~~~-~~~~~~~~~~-~~~  212 (233)
T PF05368_consen  149 --------LLPPFAPVVDIKKSKDVVTLPG------PGNQKAVPVTDTRDVGRAVAAILLDPEKH-NNGKTIFLAG-ETL  212 (233)
T ss_dssp             --------HHTTTHHTTCSCCTSSEEEEET------TSTSEEEEEEHHHHHHHHHHHHHHSGGGT-TEEEEEEEGG-GEE
T ss_pred             --------hhhhhcccccccccceEEEEcc------CCCccccccccHHHHHHHHHHHHcChHHh-cCCEEEEeCC-CCC
Confidence                    1111111  1111111466777      777666675 9999999999999995322 1457777765 669


Q ss_pred             CHHHHHHHHHHHhCCCceEE
Q 028478          158 SVLEMVAAFEKASGKVHIFA  177 (208)
Q Consensus       158 s~~e~~~~i~~~~g~~~~~~  177 (208)
                      |..|+++.+.+.+|++++..
T Consensus       213 t~~eia~~~s~~~G~~v~y~  232 (233)
T PF05368_consen  213 TYNEIAAILSKVLGKKVKYV  232 (233)
T ss_dssp             EHHHHHHHHHHHHTSEEEEE
T ss_pred             CHHHHHHHHHHHHCCccEEe
Confidence            99999999999999987654

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=98.69  E-value=1.1e-07  Score=74.81  Aligned_cols=122  Identities=11%  Similarity=-0.006  Sum_probs=78.6

Q ss_pred             ccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIG   79 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~   79 (208)
                      ++.+++++|++||...+...           ...+.|+.+|.+.+.+++.+..+.  .++.++++||+.++++...    
T Consensus       125 ~~~~~~~~v~~ss~~~~~~~-----------~~~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~----  189 (255)
T TIGR01963       125 KKQGWGRIINIASAHGLVAS-----------PFKSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVE----  189 (255)
T ss_pred             HhcCCeEEEEEcchhhcCCC-----------CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHH----
Confidence            35677899999997655321           124679999999999998776542  2799999999999986210    


Q ss_pred             CCCCCCCCChHHHHHHHHhCCCCeeE-----EEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCC
Q 028478           80 EDPRGIPNNLMPFVTQVAVGRRPELT-----VFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTG  154 (208)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~  154 (208)
                                 ..+.....+......     ...      .+...+++++++|+|++++.++..+. ....++.|++.++
T Consensus       190 -----------~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~d~a~~~~~~~~~~~-~~~~g~~~~~~~g  251 (255)
T TIGR01963       190 -----------KQIADQAKTRGIPEEQVIREVML------PGQPTKRFVTVDEVAETALFLASDAA-AGITGQAIVLDGG  251 (255)
T ss_pred             -----------HHHHhhhcccCCCchHHHHHHHH------ccCccccCcCHHHHHHHHHHHcCccc-cCccceEEEEcCc
Confidence                       011111111000000     001      23456789999999999999998732 2345689999876


Q ss_pred             CC
Q 028478          155 KG  156 (208)
Q Consensus       155 ~~  156 (208)
                      ..
T Consensus       252 ~~  253 (255)
T TIGR01963       252 WT  253 (255)
T ss_pred             cc
Confidence            53

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.66  E-value=1.5e-07  Score=79.39  Aligned_cols=124  Identities=14%  Similarity=0.030  Sum_probs=91.6

Q ss_pred             CChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCC
Q 028478           35 MNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTK  114 (208)
Q Consensus        35 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  114 (208)
                      .+.|.-+|+++|+++...+.   +++++|+||+.|.+.......|+-++..  ....++....+|.  --.+.+      
T Consensus       205 PNTYtfTKal~E~~i~~~~~---~lPivIiRPsiI~st~~EP~pGWidn~~--gp~g~i~g~gkGv--lr~~~~------  271 (467)
T KOG1221|consen  205 PNTYTFTKALAEMVIQKEAE---NLPLVIIRPSIITSTYKEPFPGWIDNLN--GPDGVIIGYGKGV--LRCFLV------  271 (467)
T ss_pred             CCceeehHhhHHHHHHhhcc---CCCeEEEcCCceeccccCCCCCccccCC--CCceEEEEeccce--EEEEEE------
Confidence            46799999999999998755   6899999999999987776667665542  3333444455554  223444      


Q ss_pred             CCcceeeeeeHHHHHHHHHHHhhhcCCCC--CCCceEEecCCC--CcCHHHHHHHHHHHhC
Q 028478          115 DGTGVRDYIHVIDLADGHIAALHKLDDPK--IGCEVYNLGTGK--GTSVLEMVAAFEKASG  171 (208)
Q Consensus       115 ~~~~~~~~i~v~D~a~~~~~~~~~~~~~~--~~~~~~ni~~~~--~~s~~e~~~~i~~~~g  171 (208)
                      +.+..-|+|.+|.++.+++.++-.-....  ....+||++++.  +++++++.+...+.+.
T Consensus       272 d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np~t~~~~~e~~~~~~~  332 (467)
T KOG1221|consen  272 DPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNPVTWGDFIELALRYFE  332 (467)
T ss_pred             ccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCcccHHHHHHHHHHhcc
Confidence            78889999999999999998774311111  124699999764  7999999999888764

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=98.62  E-value=9.5e-08  Score=71.53  Aligned_cols=99  Identities=24%  Similarity=0.256  Sum_probs=67.0

Q ss_pred             CccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCC
Q 028478            1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         1 a~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      |+++|++++|++||..+|+........+..  .....|...|..+|+.++.    . +++++++||+.+||+...     
T Consensus        85 ~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~e~~~~~----~-~~~~~ivrp~~~~~~~~~-----  152 (183)
T PF13460_consen   85 AKKAGVKRVVYLSSAGVYRDPPGLFSDEDK--PIFPEYARDKREAEEALRE----S-GLNWTIVRPGWIYGNPSR-----  152 (183)
T ss_dssp             HHHTTSSEEEEEEETTGTTTCTSEEEGGTC--GGGHHHHHHHHHHHHHHHH----S-TSEEEEEEESEEEBTTSS-----
T ss_pred             ccccccccceeeeccccCCCCCcccccccc--cchhhhHHHHHHHHHHHHh----c-CCCEEEEECcEeEeCCCc-----
Confidence            356899999999999999743321111111  1125688899999888853    2 899999999999996310     


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhh
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHK  138 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  138 (208)
                                            ...+...     .+....++|+.+|+|++++.++++
T Consensus       153 ----------------------~~~~~~~-----~~~~~~~~i~~~DvA~~~~~~l~~  183 (183)
T PF13460_consen  153 ----------------------SYRLIKE-----GGPQGVNFISREDVAKAIVEALEN  183 (183)
T ss_dssp             ----------------------SEEEESS-----TSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred             ----------------------ceeEEec-----cCCCCcCcCCHHHHHHHHHHHhCC
Confidence                                  0111110     234455899999999999999874

...

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=98.58  E-value=7.2e-07  Score=70.40  Aligned_cols=126  Identities=10%  Similarity=-0.021  Sum_probs=79.0

Q ss_pred             ccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIG   79 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~   79 (208)
                      ++.+.+++|++||...+..           ..+.+.|+.+|.+.+.+++.++.+.  .++.++++||+.++++.....+.
T Consensus       132 ~~~~~~~iv~~ss~~~~~~-----------~~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~  200 (262)
T PRK13394        132 KDDRGGVVIYMGSVHSHEA-----------SPLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIP  200 (262)
T ss_pred             hhcCCcEEEEEcchhhcCC-----------CCCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhH
Confidence            3456789999999644321           1235689999999999998887653  27999999999999973211000


Q ss_pred             CCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           80 EDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                      ..........-..+.+..          +      .+...++|++++|++++++.++..+. ....++.|++.++.
T Consensus       201 ~~~~~~~~~~~~~~~~~~----------~------~~~~~~~~~~~~dva~a~~~l~~~~~-~~~~g~~~~~~~g~  259 (262)
T PRK13394        201 EQAKELGISEEEVVKKVM----------L------GKTVDGVFTTVEDVAQTVLFLSSFPS-AALTGQSFVVSHGW  259 (262)
T ss_pred             hhhhccCCChHHHHHHHH----------h------cCCCCCCCCCHHHHHHHHHHHcCccc-cCCcCCEEeeCCce
Confidence            000000000000111111          1      23445789999999999999998642 23456889888764

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=98.49  E-value=1.5e-06  Score=68.41  Aligned_cols=125  Identities=10%  Similarity=-0.049  Sum_probs=76.8

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      +.+.++||++||...+..           ..+.+.|+.+|.+.+.+.+.++.+.  .++.+.++||+.+.++........
T Consensus       129 ~~~~~~iv~iss~~~~~~-----------~~~~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~  197 (258)
T PRK12429        129 AQGGGRIINMASVHGLVG-----------SAGKAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPD  197 (258)
T ss_pred             hcCCeEEEEEcchhhccC-----------CCCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhh
Confidence            456789999999755432           1235789999999999988876543  379999999999999742211000


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                      ......-.....+...          ++      .....+.+++++|+|+++..++.... ....++.|++.+|.
T Consensus       198 ~~~~~~~~~~~~~~~~----------~~------~~~~~~~~~~~~d~a~~~~~l~~~~~-~~~~g~~~~~~~g~  255 (258)
T PRK12429        198 LAKERGISEEEVLEDV----------LL------PLVPQKRFTTVEEIADYALFLASFAA-KGVTGQAWVVDGGW  255 (258)
T ss_pred             hccccCCChHHHHHHH----------Hh------ccCCccccCCHHHHHHHHHHHcCccc-cCccCCeEEeCCCE
Confidence            0000000000010011          11      12234679999999999999987632 23456889888663

>PRK05875 short chain dehydrogenase; Provisional

Probab=98.47  E-value=6.7e-07  Score=71.30  Aligned_cols=131  Identities=16%  Similarity=0.020  Sum_probs=86.9

Q ss_pred             CCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCC
Q 028478            5 GCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDP   82 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~   82 (208)
                      +..+++++||...+..           ..+.+.|+.+|.+.|.+++.+..+.  +++.++++||+.+.++.....     
T Consensus       137 ~~g~iv~~sS~~~~~~-----------~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~-----  200 (276)
T PRK05875        137 GGGSFVGISSIAASNT-----------HRWFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPI-----  200 (276)
T ss_pred             CCcEEEEEechhhcCC-----------CCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCcccccc-----
Confidence            3458999999776532           1235789999999999999887654  368999999998877531100     


Q ss_pred             CCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCc----C
Q 028478           83 RGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGT----S  158 (208)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~----s  158 (208)
                       .  . .-..........  +               ...+++++|+|+++..++..+.. ...++++++.++..+    +
T Consensus       201 -~--~-~~~~~~~~~~~~--~---------------~~~~~~~~dva~~~~~l~~~~~~-~~~g~~~~~~~g~~~~~~~~  258 (276)
T PRK05875        201 -T--E-SPELSADYRACT--P---------------LPRVGEVEDVANLAMFLLSDAAS-WITGQVINVDGGHMLRRGPD  258 (276)
T ss_pred             -c--c-CHHHHHHHHcCC--C---------------CCCCcCHHHHHHHHHHHcCchhc-CcCCCEEEECCCeeccCCcc
Confidence             0  0 000111111111  1               12357799999999999987422 235699999988765    7


Q ss_pred             HHHHHHHHHHHhCCC
Q 028478          159 VLEMVAAFEKASGKV  173 (208)
Q Consensus       159 ~~e~~~~i~~~~g~~  173 (208)
                      +.|+++.+.+..|.+
T Consensus       259 ~~~~~~~~~~~~~~~  273 (276)
T PRK05875        259 FSSMLEPVFGADGLR  273 (276)
T ss_pred             HHHHHHHHhhHHHHh
Confidence            888888877665543

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.45  E-value=8.6e-07  Score=69.13  Aligned_cols=115  Identities=10%  Similarity=-0.051  Sum_probs=77.8

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      +.+++++|++||...+...           .+...|+.+|...+.+++.++++.  .+++++++||+.++|+....    
T Consensus       132 ~~~~~~~i~~SS~~~~~~~-----------~~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~----  196 (249)
T PRK12825        132 KQRGGRIVNISSVAGLPGW-----------PGRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEA----  196 (249)
T ss_pred             hcCCCEEEEECccccCCCC-----------CCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCcccc----
Confidence            4578899999997766321           235689999999999998876642  28999999999999973211    


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCc
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGT  157 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~  157 (208)
                             .+.......   . ...+             ...+++.+|+++++..++++. .....+++|++.++..+
T Consensus       197 -------~~~~~~~~~---~-~~~~-------------~~~~~~~~dva~~~~~~~~~~-~~~~~g~~~~i~~g~~~  248 (249)
T PRK12825        197 -------TIEEAREAK---D-AETP-------------LGRSGTPEDIARAVAFLCSDA-SDYITGQVIEVTGGVDV  248 (249)
T ss_pred             -------ccchhHHhh---h-ccCC-------------CCCCcCHHHHHHHHHHHhCcc-ccCcCCCEEEeCCCEee
Confidence                   011111111   0 0111             122899999999999999773 22356799999987643

>PRK07074 short chain dehydrogenase; Provisional

Probab=98.39  E-value=7.1e-07  Score=70.38  Aligned_cols=128  Identities=9%  Similarity=-0.074  Sum_probs=85.4

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      .+..++|++||...+...            ....|+.+|.+.+.+++.++.++  .++++.++||+.+.++.....    
T Consensus       126 ~~~~~iv~~sS~~~~~~~------------~~~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~----  189 (257)
T PRK07074        126 RSRGAVVNIGSVNGMAAL------------GHPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEAR----  189 (257)
T ss_pred             cCCeEEEEEcchhhcCCC------------CCcccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcc----
Confidence            455689999985433210            12369999999999999987654  268999999999988631100    


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHHH
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLE  161 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e  161 (208)
                        .  .....+......                 ....++|++++|++++++.++.... ....++.+++.++...+..|
T Consensus       190 --~--~~~~~~~~~~~~-----------------~~~~~~~~~~~d~a~~~~~l~~~~~-~~~~g~~~~~~~g~~~~~~~  247 (257)
T PRK07074        190 --V--AANPQVFEELKK-----------------WYPLQDFATPDDVANAVLFLASPAA-RAITGVCLPVDGGLTAGNRE  247 (257)
T ss_pred             --c--ccChHHHHHHHh-----------------cCCCCCCCCHHHHHHHHHHHcCchh-cCcCCcEEEeCCCcCcCChh
Confidence              0  000112221211                 1113578999999999999997522 23456888999888888999


Q ss_pred             HHHHHHHH
Q 028478          162 MVAAFEKA  169 (208)
Q Consensus       162 ~~~~i~~~  169 (208)
                      +.+.+.+.
T Consensus       248 ~~~~~~~~  255 (257)
T PRK07074        248 MARTLTLE  255 (257)
T ss_pred             hhhhhccc
Confidence            98887543

>PRK08263 short chain dehydrogenase; Provisional

Probab=98.39  E-value=1.6e-06  Score=69.25  Aligned_cols=137  Identities=7%  Similarity=-0.069  Sum_probs=84.6

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      +.+.+++|++||...+.+..           ..+.|+.+|.+.+.+.+.++.+.  .+++++++||+.+..+........
T Consensus       125 ~~~~~~iv~vsS~~~~~~~~-----------~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~  193 (275)
T PRK08263        125 EQRSGHIIQISSIGGISAFP-----------MSGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKR  193 (275)
T ss_pred             hcCCCEEEEEcChhhcCCCC-----------CccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCcccccccc
Confidence            45677999999977664221           24679999999999998887642  289999999998887532100000


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeee-eeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCH
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDY-IHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSV  159 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~  159 (208)
                      .  . ......-+.....                +....+.+ ++.+|+|++++.+++.+   ...++.++.+.+..+++
T Consensus       194 ~--~-~~~~~~~~~~~~~----------------~~~~~~~~~~~p~dva~~~~~l~~~~---~~~~~~~~~~~~~~~~~  251 (275)
T PRK08263        194 A--T-PLDAYDTLREELA----------------EQWSERSVDGDPEAAAEALLKLVDAE---NPPLRLFLGSGVLDLAK  251 (275)
T ss_pred             C--C-CchhhhhHHHHHH----------------HHHHhccCCCCHHHHHHHHHHHHcCC---CCCeEEEeCchHHHHHH
Confidence            0  0 0000111111111                01112335 88999999999999983   22334444444467899


Q ss_pred             HHHHHHHHHHhCC
Q 028478          160 LEMVAAFEKASGK  172 (208)
Q Consensus       160 ~e~~~~i~~~~g~  172 (208)
                      .++.+.+.+.-+.
T Consensus       252 ~~~~~~~~~~~~~  264 (275)
T PRK08263        252 ADYERRLATWEEW  264 (275)
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999886443

>PRK07775 short chain dehydrogenase; Provisional

Probab=98.38  E-value=4.8e-06  Score=66.48  Aligned_cols=111  Identities=16%  Similarity=0.151  Sum_probs=71.6

Q ss_pred             CCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCC
Q 028478            5 GCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDP   82 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~   82 (208)
                      +..+||++||...+...           .+...|+.+|.+.|.+++.++.+.  .++.++++|||.+.++.     +.. 
T Consensus       137 ~~g~iv~isS~~~~~~~-----------~~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~-----~~~-  199 (274)
T PRK07775        137 RRGDLIFVGSDVALRQR-----------PHMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGM-----GWS-  199 (274)
T ss_pred             CCceEEEECChHhcCCC-----------CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcc-----ccc-
Confidence            44579999998776421           124679999999999999887543  27999999998776542     110 


Q ss_pred             CCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEec
Q 028478           83 RGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLG  152 (208)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~  152 (208)
                       .....+..++......        +       +...+.+++++|+|++++.+++++    ..+.+||+.
T Consensus       200 -~~~~~~~~~~~~~~~~--------~-------~~~~~~~~~~~dva~a~~~~~~~~----~~~~~~~~~  249 (274)
T PRK07775        200 -LPAEVIGPMLEDWAKW--------G-------QARHDYFLRASDLARAITFVAETP----RGAHVVNME  249 (274)
T ss_pred             -CChhhhhHHHHHHHHh--------c-------ccccccccCHHHHHHHHHHHhcCC----CCCCeeEEe
Confidence             0011111222222111        1       122356899999999999999873    344678775

>PRK09135 pteridine reductase; Provisional

Probab=98.37  E-value=2.5e-06  Score=66.68  Aligned_cols=101  Identities=16%  Similarity=0.110  Sum_probs=67.4

Q ss_pred             CCCCCCCChHHHhHHHHHHHHHHHhhcC-CCccEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCeeEEE
Q 028478           29 EFPLEAMNPYGRTKLFIEEICRDVHRSD-SEWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVF  107 (208)
Q Consensus        29 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~iiR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (208)
                      ..+..+.+.|+.+|.++|.+++.+..++ +++.++++||+.++|+....           .+..........+. ++.. 
T Consensus       147 ~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~-----------~~~~~~~~~~~~~~-~~~~-  213 (249)
T PRK09135        147 ERPLKGYPVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGN-----------SFDEEARQAILART-PLKR-  213 (249)
T ss_pred             cCCCCCchhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccc-----------cCCHHHHHHHHhcC-CcCC-
Confidence            3456678899999999999999988765 36899999999999984211           11122222222221 2211 


Q ss_pred             ccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcC
Q 028478          108 GTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTS  158 (208)
Q Consensus       108 ~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s  158 (208)
                                    +.+++|+|+++..++..  .....+++||++++..++
T Consensus       214 --------------~~~~~d~a~~~~~~~~~--~~~~~g~~~~i~~g~~~~  248 (249)
T PRK09135        214 --------------IGTPEDIAEAVRFLLAD--ASFITGQILAVDGGRSLT  248 (249)
T ss_pred             --------------CcCHHHHHHHHHHHcCc--cccccCcEEEECCCeecc
Confidence                          22479999999766654  123467999999887654

>PRK06914 short chain dehydrogenase; Provisional

Probab=98.32  E-value=4.3e-06  Score=66.78  Aligned_cols=127  Identities=13%  Similarity=0.110  Sum_probs=76.7

Q ss_pred             ccCCCCEEEEeccccc-cCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhh---cCCCccEEEEecccccCCCCCCC
Q 028478            2 AAHGCKNLVFSSSATV-YGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHR---SDSEWKIILLRYFNPVGAHPSGK   77 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~v-yg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~~~~~~iiR~~~i~G~~~~~~   77 (208)
                      ++.+..++|++||... ++.            .+...|+.+|...+.+++.++.   .+ +++++++|||.+.++.....
T Consensus       128 ~~~~~~~iv~vsS~~~~~~~------------~~~~~Y~~sK~~~~~~~~~l~~~~~~~-~i~v~~v~pg~~~t~~~~~~  194 (280)
T PRK06914        128 RKQKSGKIINISSISGRVGF------------PGLSPYVSSKYALEGFSESLRLELKPF-GIDVALIEPGSYNTNIWEVG  194 (280)
T ss_pred             HhcCCCEEEEECcccccCCC------------CCCchhHHhHHHHHHHHHHHHHHhhhh-CCEEEEEecCCcccchhhcc
Confidence            3456678999998543 331            2356899999999999888763   34 89999999999988632110


Q ss_pred             C-CCCCCCCC-CChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           78 I-GEDPRGIP-NNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        78 ~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                      . ........ ......+.......               ....+.+++++|+|++++.+++++    .....|+++++.
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~dva~~~~~~~~~~----~~~~~~~~~~~~  255 (280)
T PRK06914        195 KQLAENQSETTSPYKEYMKKIQKHI---------------NSGSDTFGNPIDVANLIVEIAESK----RPKLRYPIGKGV  255 (280)
T ss_pred             ccccccccccccchHHHHHHHHHHH---------------hhhhhccCCHHHHHHHHHHHHcCC----CCCcccccCCch
Confidence            0 00000000 11111222221110               011234788999999999999983    223578888776


Q ss_pred             CcCHH
Q 028478          156 GTSVL  160 (208)
Q Consensus       156 ~~s~~  160 (208)
                      .+++.
T Consensus       256 ~~~~~  260 (280)
T PRK06914        256 KLMIL  260 (280)
T ss_pred             HHHHH
Confidence            65554

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.31  E-value=4.6e-06  Score=65.41  Aligned_cols=112  Identities=13%  Similarity=0.040  Sum_probs=74.6

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC-CCccEEEEecccccCCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD-SEWKIILLRYFNPVGAHPSGKIGEDPRGI   85 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~iiR~~~i~G~~~~~~~~~~~~~~   85 (208)
                      .++|++||...+.           +..+.+.|+.+|.+.|.+++.++.++ +++.+.+++|+.+.++....     ... 
T Consensus       134 ~~iv~~sS~~~~~-----------~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~-----~~~-  196 (252)
T PRK06077        134 GAIVNIASVAGIR-----------PAYGLSIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGES-----LFK-  196 (252)
T ss_pred             cEEEEEcchhccC-----------CCCCchHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHh-----hhh-
Confidence            4799999977664           23356789999999999999988775 46899999999988752100     000 


Q ss_pred             CCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           86 PNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                         +..........   .            ......+++++|+|++++.+++.+   ...+++|++.+++.
T Consensus       197 ---~~~~~~~~~~~---~------------~~~~~~~~~~~dva~~~~~~~~~~---~~~g~~~~i~~g~~  246 (252)
T PRK06077        197 ---VLGMSEKEFAE---K------------FTLMGKILDPEEVAEFVAAILKIE---SITGQVFVLDSGES  246 (252)
T ss_pred             ---cccccHHHHHH---h------------cCcCCCCCCHHHHHHHHHHHhCcc---ccCCCeEEecCCee
Confidence               00000000000   0            111236899999999999999763   34568999988763

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=98.30  E-value=2.6e-06  Score=66.63  Aligned_cols=115  Identities=10%  Similarity=-0.005  Sum_probs=75.2

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      +.+.++||++||...++.          +..+...|+.+|.+.+.+++.+..+.  .+++++++||+.++|+.....   
T Consensus       131 ~~~~~~ii~~ss~~~~~~----------~~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~---  197 (251)
T PRK12826        131 RAGGGRIVLTSSVAGPRV----------GYPGLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNL---  197 (251)
T ss_pred             HcCCcEEEEEechHhhcc----------CCCCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhc---
Confidence            345678999999766521          12235689999999999998876542  279999999999999742110   


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                           ...   .+.......   .+             ...+++++|+|+++..++..+. ....+++|++.+|.
T Consensus       198 -----~~~---~~~~~~~~~---~~-------------~~~~~~~~dva~~~~~l~~~~~-~~~~g~~~~~~~g~  247 (251)
T PRK12826        198 -----GDA---QWAEAIAAA---IP-------------LGRLGEPEDIAAAVLFLASDEA-RYITGQTLPVDGGA  247 (251)
T ss_pred             -----Cch---HHHHHHHhc---CC-------------CCCCcCHHHHHHHHHHHhCccc-cCcCCcEEEECCCc
Confidence                 000   111111111   01             1247899999999999887632 23467999998765

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=98.16  E-value=2.6e-05  Score=61.54  Aligned_cols=122  Identities=13%  Similarity=0.044  Sum_probs=75.0

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      +.+..+||++||...++.             +...|+.+|.+.+.+++.++.++  .++.+.+++|+.++++........
T Consensus       133 ~~~~g~iv~~sS~~~~~~-------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~  199 (260)
T PRK12823        133 AQGGGAIVNVSSIATRGI-------------NRVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNA  199 (260)
T ss_pred             hcCCCeEEEEcCccccCC-------------CCCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhh
Confidence            345568999999876541             13469999999999999887653  279999999999999631100000


Q ss_pred             -CCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           81 -DPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        81 -~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                       ........... +......+.  ++..               +.+.+|+|+++..++... .....++.+++.+++
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~--~~~~---------------~~~~~dva~~~~~l~s~~-~~~~~g~~~~v~gg~  258 (260)
T PRK12823        200 APQSEQEKAWYQQIVDQTLDSS--LMKR---------------YGTIDEQVAAILFLASDE-ASYITGTVLPVGGGD  258 (260)
T ss_pred             ccccccccccHHHHHHHHhccC--Cccc---------------CCCHHHHHHHHHHHcCcc-cccccCcEEeecCCC
Confidence             00000111222 232332222  2221               346899999999988652 223456889887665

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=98.13  E-value=4.1e-06  Score=66.05  Aligned_cols=120  Identities=11%  Similarity=-0.001  Sum_probs=75.4

Q ss_pred             CEEEEecccc-ccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhc---CCCccEEEEecccccCCCCCCCCCCCC
Q 028478            7 KNLVFSSSAT-VYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRS---DSEWKIILLRYFNPVGAHPSGKIGEDP   82 (208)
Q Consensus         7 k~~i~~SS~~-vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~iiR~~~i~G~~~~~~~~~~~   82 (208)
                      .++|++||.. .++            ..+...|+.+|.+.+.+.+.++.+   + ++++++++|+.++++..+.      
T Consensus       133 ~~iv~~sS~~~~~~------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~-gi~v~~i~pg~v~t~~~~~------  193 (257)
T PRK07067        133 GKIINMASQAGRRG------------EALVSHYCATKAAVISYTQSAALALIRH-GINVNAIAPGVVDTPMWDQ------  193 (257)
T ss_pred             cEEEEeCCHHhCCC------------CCCCchhhhhHHHHHHHHHHHHHHhccc-CeEEEEEeeCcccchhhhh------
Confidence            3799999853 232            124678999999999999887763   4 8999999999999973210      


Q ss_pred             CCCCCChHHHHHHHHhCC-CCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcC
Q 028478           83 RGIPNNLMPFVTQVAVGR-RPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTS  158 (208)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s  158 (208)
                            ....+.....-. ......++      .+...+.+++.+|+|+++..++... .....+++|++.+|..+|
T Consensus       194 ------~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~dva~~~~~l~s~~-~~~~~g~~~~v~gg~~~~  257 (257)
T PRK07067        194 ------VDALFARYENRPPGEKKRLVG------EAVPLGRMGVPDDLTGMALFLASAD-ADYIVAQTYNVDGGNWMS  257 (257)
T ss_pred             ------hhhhhhhccCCCHHHHHHHHh------hcCCCCCccCHHHHHHHHHHHhCcc-cccccCcEEeecCCEeCC
Confidence                  000000000000 00000111      2333567899999999999998763 223567999998876543

>PRK12828 short chain dehydrogenase; Provisional

Probab=98.12  E-value=1.8e-05  Score=61.37  Aligned_cols=105  Identities=10%  Similarity=0.015  Sum_probs=73.3

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhc---CCCccEEEEecccccCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRS---DSEWKIILLRYFNPVGAHPSGKIG   79 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~iiR~~~i~G~~~~~~~~   79 (208)
                      +.+++++|++||...++..           .+...|+.+|.+.+.+++.++..   . ++.+.++||+.++++..     
T Consensus       130 ~~~~~~iv~~sS~~~~~~~-----------~~~~~y~~sk~a~~~~~~~~a~~~~~~-~i~~~~i~pg~v~~~~~-----  192 (239)
T PRK12828        130 ASGGGRIVNIGAGAALKAG-----------PGMGAYAAAKAGVARLTEALAAELLDR-GITVNAVLPSIIDTPPN-----  192 (239)
T ss_pred             hcCCCEEEEECchHhccCC-----------CCcchhHHHHHHHHHHHHHHHHHhhhc-CeEEEEEecCcccCcch-----
Confidence            3567899999998777532           23567999999998888776653   3 79999999999998620     


Q ss_pred             CCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           80 EDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                                    ...       ..          ......+++++|+|+++..+++.... ...++.+++.++..
T Consensus       193 --------------~~~-------~~----------~~~~~~~~~~~dva~~~~~~l~~~~~-~~~g~~~~~~g~~~  237 (239)
T PRK12828        193 --------------RAD-------MP----------DADFSRWVTPEQIAAVIAFLLSDEAQ-AITGASIPVDGGVA  237 (239)
T ss_pred             --------------hhc-------CC----------chhhhcCCCHHHHHHHHHHHhCcccc-cccceEEEecCCEe
Confidence                          000       00          01122378999999999999986322 24568888877653

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=98.07  E-value=1.2e-05  Score=61.60  Aligned_cols=112  Identities=21%  Similarity=0.171  Sum_probs=70.3

Q ss_pred             CccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCC
Q 028478            1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         1 a~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      |.+.|+++|+|+|. .-||-..         .- ...|-.+|..+|..+..   .+ ++.-+++|||.+||.+.-+.. .
T Consensus       149 a~~~gv~~fvyISa-~d~~~~~---------~i-~rGY~~gKR~AE~Ell~---~~-~~rgiilRPGFiyg~R~v~g~-~  212 (283)
T KOG4288|consen  149 AAKAGVPRFVYISA-HDFGLPP---------LI-PRGYIEGKREAEAELLK---KF-RFRGIILRPGFIYGTRNVGGI-K  212 (283)
T ss_pred             HHHcCCceEEEEEh-hhcCCCC---------cc-chhhhccchHHHHHHHH---hc-CCCceeeccceeecccccCcc-c
Confidence            45789999999997 3333111         11 23688899999976653   33 678899999999997432111 0


Q ss_pred             CCCCCCCChHHHHHHHHhCC---CCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhc
Q 028478           81 DPRGIPNNLMPFVTQVAVGR---RPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKL  139 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  139 (208)
                      .+-   ..+-..+....+..   ...+++.|        ...+..+.++++|.+.+.++++|
T Consensus       213 ~pL---~~vg~pl~~~~~~a~k~~~kLp~lg--------~l~~ppvnve~VA~aal~ai~dp  263 (283)
T KOG4288|consen  213 SPL---HTVGEPLEMVLKFALKPLNKLPLLG--------PLLAPPVNVESVALAALKAIEDP  263 (283)
T ss_pred             ccH---HhhhhhHHHHHHhhhchhhcCcccc--------cccCCCcCHHHHHHHHHHhccCC
Confidence            000   11111222222222   22466654        56788999999999999999994

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=98.06  E-value=6e-05  Score=58.60  Aligned_cols=113  Identities=10%  Similarity=-0.077  Sum_probs=75.3

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      +.+++++|++||.....           +..+...|+.+|.+.+.+++.+.++.  .++.++++||+.++++...     
T Consensus       130 ~~~~~~ii~~ss~~~~~-----------~~~~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~-----  193 (246)
T PRK05653        130 KARYGRIVNISSVSGVT-----------GNPGQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTE-----  193 (246)
T ss_pred             hcCCcEEEEECcHHhcc-----------CCCCCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchh-----
Confidence            45678999999864432           11235679999999999988876542  2789999999999997311     


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                             .+...+.......                ...+.+++.+|+|+++..++... .....+++|++.+|.
T Consensus       194 -------~~~~~~~~~~~~~----------------~~~~~~~~~~dva~~~~~~~~~~-~~~~~g~~~~~~gg~  244 (246)
T PRK05653        194 -------GLPEEVKAEILKE----------------IPLGRLGQPEEVANAVAFLASDA-ASYITGQVIPVNGGM  244 (246)
T ss_pred             -------hhhHHHHHHHHhc----------------CCCCCCcCHHHHHHHHHHHcCch-hcCccCCEEEeCCCe
Confidence                   0111222211111                11245789999999999998752 223467899998775

>PRK07060 short chain dehydrogenase; Provisional

Probab=98.05  E-value=1.7e-05  Score=61.84  Aligned_cols=112  Identities=11%  Similarity=0.001  Sum_probs=73.7

Q ss_pred             CCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCC
Q 028478            6 CKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPR   83 (208)
Q Consensus         6 vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~   83 (208)
                      ..+||++||...+...           .+...|+.+|.+.|.+++.++.++  .++.++.+||+.+.++.....+     
T Consensus       129 ~~~iv~~sS~~~~~~~-----------~~~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~-----  192 (245)
T PRK07060        129 GGSIVNVSSQAALVGL-----------PDHLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAW-----  192 (245)
T ss_pred             CcEEEEEccHHHcCCC-----------CCCcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhc-----
Confidence            3589999997665321           234679999999999999887653  2799999999999987421110     


Q ss_pred             CCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           84 GIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                         ... ........ .                ...+.+++++|+|+++..++..+. ....|+.+++.+|.
T Consensus       193 ---~~~-~~~~~~~~-~----------------~~~~~~~~~~d~a~~~~~l~~~~~-~~~~G~~~~~~~g~  242 (245)
T PRK07060        193 ---SDP-QKSGPMLA-A----------------IPLGRFAEVDDVAAPILFLLSDAA-SMVSGVSLPVDGGY  242 (245)
T ss_pred             ---cCH-HHHHHHHh-c----------------CCCCCCCCHHHHHHHHHHHcCccc-CCccCcEEeECCCc
Confidence               000 01111111 1                012347899999999999998642 34567888887654

>PRK06180 short chain dehydrogenase; Provisional

Probab=98.05  E-value=5.8e-05  Score=60.31  Aligned_cols=60  Identities=12%  Similarity=-0.006  Sum_probs=45.6

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAH   73 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~   73 (208)
                      +.+..++|++||...+..           ..+...|+.+|.+.|.+++.++.+.  .+++++++||+.+.++.
T Consensus       126 ~~~~~~iv~iSS~~~~~~-----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~  187 (277)
T PRK06180        126 ARRRGHIVNITSMGGLIT-----------MPGIGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDW  187 (277)
T ss_pred             ccCCCEEEEEecccccCC-----------CCCcchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCc
Confidence            345668999999765532           1245789999999999998876542  28999999999998753

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=98.04  E-value=1.4e-05  Score=62.86  Aligned_cols=116  Identities=11%  Similarity=0.052  Sum_probs=75.4

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhh---cCCCccEEEEecccccCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHR---SDSEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      .+..++|++||.....           +......|+.+|.+.+.+++.++.   .+ ++++.++||+.+.++......  
T Consensus       136 ~~~g~iv~iss~~~~~-----------~~~~~~~y~~sK~a~~~~~~~~a~e~~~~-gi~v~~i~pg~~~t~~~~~~~--  201 (255)
T PRK07523        136 RGAGKIINIASVQSAL-----------ARPGIAPYTATKGAVGNLTKGMATDWAKH-GLQCNAIAPGYFDTPLNAALV--  201 (255)
T ss_pred             hCCeEEEEEccchhcc-----------CCCCCccHHHHHHHHHHHHHHHHHHhhHh-CeEEEEEEECcccCchhhhhc--
Confidence            3566899999864432           122356899999999999998875   34 899999999999987321100  


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcC
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTS  158 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s  158 (208)
                            .  ............ +               ...+...+|+|++++.++.... ....++.+++.++..+|
T Consensus       202 ------~--~~~~~~~~~~~~-~---------------~~~~~~~~dva~~~~~l~~~~~-~~~~G~~i~~~gg~~~~  254 (255)
T PRK07523        202 ------A--DPEFSAWLEKRT-P---------------AGRWGKVEELVGACVFLASDAS-SFVNGHVLYVDGGITAS  254 (255)
T ss_pred             ------c--CHHHHHHHHhcC-C---------------CCCCcCHHHHHHHHHHHcCchh-cCccCcEEEECCCeecc
Confidence                  0  011111111110 1               1236789999999999987632 23457899998876554

>PRK07774 short chain dehydrogenase; Provisional

Probab=98.03  E-value=4.9e-05  Score=59.51  Aligned_cols=111  Identities=18%  Similarity=0.151  Sum_probs=74.6

Q ss_pred             CCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCC
Q 028478            5 GCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDP   82 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~   82 (208)
                      +.+++|++||...|+              +.+.|+.+|.+.|.+++.+.+++  .++.+++++|+.+..+....      
T Consensus       136 ~~~~iv~~sS~~~~~--------------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~------  195 (250)
T PRK07774        136 GGGAIVNQSSTAAWL--------------YSNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRT------  195 (250)
T ss_pred             CCcEEEEEecccccC--------------CccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccc------
Confidence            346899999987764              24679999999999999987764  37899999998887753110      


Q ss_pred             CCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCc
Q 028478           83 RGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGT  157 (208)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~  157 (208)
                       ..+.   .+.....++.  ++.               -+.+++|+|++++.++..+. ....+++|++.++..+
T Consensus       196 -~~~~---~~~~~~~~~~--~~~---------------~~~~~~d~a~~~~~~~~~~~-~~~~g~~~~v~~g~~~  248 (250)
T PRK07774        196 -VTPK---EFVADMVKGI--PLS---------------RMGTPEDLVGMCLFLLSDEA-SWITGQIFNVDGGQII  248 (250)
T ss_pred             -cCCH---HHHHHHHhcC--CCC---------------CCcCHHHHHHHHHHHhChhh-hCcCCCEEEECCCeec
Confidence             0001   1222233322  111               14568999999999988632 1245689999987654

>PRK06194 hypothetical protein; Provisional

Probab=98.03  E-value=4.1e-05  Score=61.35  Aligned_cols=133  Identities=10%  Similarity=0.022  Sum_probs=83.7

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC----CCccEEEEecccccCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD----SEWKIILLRYFNPVGAHPSGKIGEDP   82 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~iiR~~~i~G~~~~~~~~~~~   82 (208)
                      .++|++||...+...           .+...|+.+|.+.|.+++.++.++    .++.+..+.|+.+..+          
T Consensus       141 g~iv~~sS~~~~~~~-----------~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~----------  199 (287)
T PRK06194        141 GHIVNTASMAGLLAP-----------PAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTG----------  199 (287)
T ss_pred             eEEEEeCChhhccCC-----------CCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCc----------
Confidence            489999997666421           234679999999999999887754    1344555555444332          


Q ss_pred             CCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHHHH
Q 028478           83 RGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEM  162 (208)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~  162 (208)
                                +.....++  +..+++      ++.+.+++++++|++..+...       .            .++..|+
T Consensus       200 ----------~~~~~~~~--~~~~~~------~~~~~~~~~~~~~~~~~~~~~-------~------------~~s~~dv  242 (287)
T PRK06194        200 ----------IWQSERNR--PADLAN------TAPPTRSQLIAQAMSQKAVGS-------G------------KVTAEEV  242 (287)
T ss_pred             ----------cccccccC--chhccc------CccccchhhHHHHHHHhhhhc-------c------------CCCHHHH
Confidence                      11222233  456666      778899999999987765211       0            1789999


Q ss_pred             HHHHHHHhCCCceEEEeeeehhccchhhhhhhhhhccc
Q 028478          163 VAAFEKASGKVHIFALFCILFIHRWKLLFRFWIVFCKF  200 (208)
Q Consensus       163 ~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~k~  200 (208)
                      ++.+.+.+....... ...+  .+..+....+.|..+.
T Consensus       243 a~~i~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~  277 (287)
T PRK06194        243 AQLVFDAIRAGRFYI-YSHP--QALASVRTRMEDIVQQ  277 (287)
T ss_pred             HHHHHHHHHcCCeEE-EcCH--HHHHHHHHHHHHHHHh
Confidence            999998775432222 2222  2345566666666654

>PRK05876 short chain dehydrogenase; Provisional

Probab=98.03  E-value=7.1e-05  Score=59.87  Aligned_cols=125  Identities=16%  Similarity=0.105  Sum_probs=73.2

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      .++|++||...+..           ..+...|+.+|.+.+.+.+.++.++  .++.+++++|+.+.++...+.       
T Consensus       136 g~iv~isS~~~~~~-----------~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~-------  197 (275)
T PRK05876        136 GHVVFTASFAGLVP-----------NAGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANS-------  197 (275)
T ss_pred             CEEEEeCChhhccC-----------CCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccch-------
Confidence            48999999766632           2345789999997444444443321  179999999999887631110       


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHHHHHH
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVA  164 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~  164 (208)
                           . .......+........+      .....+++++++|+|++++.++.+    +   +.|.+.+  +....++.+
T Consensus       198 -----~-~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~dva~~~~~ai~~----~---~~~~~~~--~~~~~~~~~  256 (275)
T PRK05876        198 -----E-RIRGAACAQSSTTGSPG------PLPLQDDNLGVDDIAQLTADAILA----N---RLYVLPH--AASRASIRR  256 (275)
T ss_pred             -----h-hhcCccccccccccccc------cccccccCCCHHHHHHHHHHHHHc----C---CeEEecC--hhhHHHHHH
Confidence                 0 00000000101112222      334557899999999999999987    3   4455542  345555655


Q ss_pred             HHHHHh
Q 028478          165 AFEKAS  170 (208)
Q Consensus       165 ~i~~~~  170 (208)
                      .+.+..
T Consensus       257 ~~~~~~  262 (275)
T PRK05876        257 RFERID  262 (275)
T ss_pred             HHHHHH
Confidence            555543

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=98.02  E-value=1.4e-05  Score=62.49  Aligned_cols=109  Identities=8%  Similarity=-0.064  Sum_probs=71.8

Q ss_pred             CCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCC
Q 028478            5 GCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDP   82 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~   82 (208)
                      +..++|++||...+..           ..+...|+.+|.+.+.+++.+..+.  .++.+++++|+.+.++...       
T Consensus       134 ~~~~iv~~sS~~~~~~-----------~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~-------  195 (247)
T PRK12935        134 EEGRIISISSIIGQAG-----------GFGQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVA-------  195 (247)
T ss_pred             CCcEEEEEcchhhcCC-----------CCCCcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhh-------
Confidence            3458999998644321           1235689999999988887776542  2799999999998775210       


Q ss_pred             CCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           83 RGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        83 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                       .    +.. .......                 ....+.+++++|++++++.+++..  ....++.||+.++.
T Consensus       196 -~----~~~~~~~~~~~-----------------~~~~~~~~~~edva~~~~~~~~~~--~~~~g~~~~i~~g~  245 (247)
T PRK12935        196 -E----VPEEVRQKIVA-----------------KIPKKRFGQADEIAKGVVYLCRDG--AYITGQQLNINGGL  245 (247)
T ss_pred             -h----ccHHHHHHHHH-----------------hCCCCCCcCHHHHHHHHHHHcCcc--cCccCCEEEeCCCc
Confidence             0    111 1111111                 122456899999999999998762  12567999998764

>PRK12746 short chain dehydrogenase; Provisional

Probab=98.01  E-value=2.8e-05  Score=61.09  Aligned_cols=110  Identities=13%  Similarity=0.008  Sum_probs=71.5

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      .++|++||..++..           ..+...|+.+|.+.|.+++.++.+.  .++.+++++|+.+.++.....   ... 
T Consensus       140 ~~~v~~sS~~~~~~-----------~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~---~~~-  204 (254)
T PRK12746        140 GRVINISSAEVRLG-----------FTGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKL---LDD-  204 (254)
T ss_pred             CEEEEECCHHhcCC-----------CCCCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhh---ccC-
Confidence            48999999877642           1235679999999999988876642  179999999999988631100   000 


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCC
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTG  154 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~  154 (208)
                            ..+.......                .....+++++|+|+++..++..+. ....+++|++.++
T Consensus       205 ------~~~~~~~~~~----------------~~~~~~~~~~dva~~~~~l~~~~~-~~~~g~~~~i~~~  251 (254)
T PRK12746        205 ------PEIRNFATNS----------------SVFGRIGQVEDIADAVAFLASSDS-RWVTGQIIDVSGG  251 (254)
T ss_pred             ------hhHHHHHHhc----------------CCcCCCCCHHHHHHHHHHHcCccc-CCcCCCEEEeCCC
Confidence                  0111111111                112346789999999998887632 2245689999865

>PRK07806 short chain dehydrogenase; Provisional

Probab=97.99  E-value=4.6e-05  Score=59.65  Aligned_cols=115  Identities=12%  Similarity=0.048  Sum_probs=69.4

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      .++|++||.......    ..+..  .....|+.+|.++|.+++.++.+.  .++.+++++|+.+-++...         
T Consensus       128 ~~iv~isS~~~~~~~----~~~~~--~~~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~---------  192 (248)
T PRK07806        128 SRVVFVTSHQAHFIP----TVKTM--PEYEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTA---------  192 (248)
T ss_pred             ceEEEEeCchhhcCc----cccCC--ccccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhh---------
Confidence            389999985432100    01111  125689999999999999986643  2788888887766654110         


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                                ....... +-.+-.      .......+++++|+|+++..+++..   ...+++|++++++.
T Consensus       193 ----------~~~~~~~-~~~~~~------~~~~~~~~~~~~dva~~~~~l~~~~---~~~g~~~~i~~~~~  244 (248)
T PRK07806        193 ----------TLLNRLN-PGAIEA------RREAAGKLYTVSEFAAEVARAVTAP---VPSGHIEYVGGADY  244 (248)
T ss_pred             ----------hhhccCC-HHHHHH------HHhhhcccCCHHHHHHHHHHHhhcc---ccCccEEEecCccc
Confidence                      0000000 000000      0001135899999999999999863   34669999998763

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.96  E-value=0.00014  Score=57.06  Aligned_cols=111  Identities=11%  Similarity=-0.020  Sum_probs=72.8

Q ss_pred             CCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhc---CCCccEEEEecccccCCCCCCCCCCCC
Q 028478            6 CKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRS---DSEWKIILLRYFNPVGAHPSGKIGEDP   82 (208)
Q Consensus         6 vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~iiR~~~i~G~~~~~~~~~~~   82 (208)
                      +.++|++||...+...           .+.+.|+.+|.+.|.+++.++.+   + +++++++||+.+.++....      
T Consensus       139 ~~~iv~~sS~~~~~~~-----------~~~~~Y~~sK~a~~~~~~~l~~~~~~~-gi~v~~i~pg~v~t~~~~~------  200 (256)
T PRK12745        139 HRSIVFVSSVNAIMVS-----------PNRGEYCISKAGLSMAAQLFAARLAEE-GIGVYEVRPGLIKTDMTAP------  200 (256)
T ss_pred             CcEEEEECChhhccCC-----------CCCcccHHHHHHHHHHHHHHHHHHHHh-CCEEEEEecCCCcCccccc------
Confidence            5679999997654311           13468999999999999988764   4 8999999999998863110      


Q ss_pred             CCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           83 RGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                            +.....+......  .+             ...+.+.+|+++++..++... .....++.|++.++..
T Consensus       201 ------~~~~~~~~~~~~~--~~-------------~~~~~~~~d~a~~i~~l~~~~-~~~~~G~~~~i~gg~~  252 (256)
T PRK12745        201 ------VTAKYDALIAKGL--VP-------------MPRWGEPEDVARAVAALASGD-LPYSTGQAIHVDGGLS  252 (256)
T ss_pred             ------cchhHHhhhhhcC--CC-------------cCCCcCHHHHHHHHHHHhCCc-ccccCCCEEEECCCee
Confidence                  1111111111110  11             234679999999999888652 2234568999987653

>PRK09186 flagellin modification protein A; Provisional

Probab=97.95  E-value=8.7e-05  Score=58.29  Aligned_cols=118  Identities=15%  Similarity=0.041  Sum_probs=73.8

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      +.+..++|++||...+.... ....++.+......|+.+|...+.+.+.++.+.  .++.+++++|+.++++.       
T Consensus       134 ~~~~~~iv~~sS~~~~~~~~-~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~-------  205 (256)
T PRK09186        134 KQGGGNLVNISSIYGVVAPK-FEIYEGTSMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQ-------  205 (256)
T ss_pred             hcCCceEEEEechhhhcccc-chhccccccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCC-------
Confidence            34667999999976543221 122334443334579999999999988776642  27999999999887641       


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCC
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTG  154 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~  154 (208)
                       .        ..+.......   ..             ...+++.+|+|++++.++.... ....++.+.+.+|
T Consensus       206 -~--------~~~~~~~~~~---~~-------------~~~~~~~~dva~~~~~l~~~~~-~~~~g~~~~~~~g  253 (256)
T PRK09186        206 -P--------EAFLNAYKKC---CN-------------GKGMLDPDDICGTLVFLLSDQS-KYITGQNIIVDDG  253 (256)
T ss_pred             -C--------HHHHHHHHhc---CC-------------ccCCCCHHHhhhhHhheecccc-ccccCceEEecCC
Confidence             0        0111111211   00             1236899999999999998632 2344577776655

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.93  E-value=0.00012  Score=57.23  Aligned_cols=114  Identities=13%  Similarity=0.053  Sum_probs=73.4

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      .+.++||++||...+.           +..+...|+.+|.+.|.+++.++.++  .++++++++|+.+..+.... +   
T Consensus       131 ~~~g~iv~~sS~~~~~-----------~~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~-~---  195 (250)
T PRK08063        131 VGGGKIISLSSLGSIR-----------YLENYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKH-F---  195 (250)
T ss_pred             cCCeEEEEEcchhhcc-----------CCCCccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhh-c---
Confidence            4566999999965542           12245689999999999999887653  27999999999998753110 0   


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                          .. ...+.... ....   +             ...+++.+|+|+++..++..+. ....++.+++.++.
T Consensus       196 ----~~-~~~~~~~~-~~~~---~-------------~~~~~~~~dva~~~~~~~~~~~-~~~~g~~~~~~gg~  246 (250)
T PRK08063        196 ----PN-REELLEDA-RAKT---P-------------AGRMVEPEDVANAVLFLCSPEA-DMIRGQTIIVDGGR  246 (250)
T ss_pred             ----cC-chHHHHHH-hcCC---C-------------CCCCcCHHHHHHHHHHHcCchh-cCccCCEEEECCCe
Confidence                00 00111111 1110   0             1236889999999999987632 23456888887665

>PRK12829 short chain dehydrogenase; Provisional

Probab=97.93  E-value=9e-05  Score=58.44  Aligned_cols=120  Identities=9%  Similarity=-0.017  Sum_probs=69.8

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      ++++++||......           ..+...|+.+|.+.|.+++.++.+.  .+++++++||+.++|+..+..+......
T Consensus       140 ~~vv~~ss~~~~~~-----------~~~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~  208 (264)
T PRK12829        140 GVIIALSSVAGRLG-----------YPGRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQ  208 (264)
T ss_pred             eEEEEecccccccC-----------CCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhc
Confidence            56777777433211           1124579999999999998876542  2799999999999997421110000000


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                      ..............                 ....+.+++++|+|+++..++... .....++.|++.++.
T Consensus       209 ~~~~~~~~~~~~~~-----------------~~~~~~~~~~~d~a~~~~~l~~~~-~~~~~g~~~~i~~g~  261 (264)
T PRK12829        209 LGIGLDEMEQEYLE-----------------KISLGRMVEPEDIAATALFLASPA-ARYITGQAISVDGNV  261 (264)
T ss_pred             cCCChhHHHHHHHh-----------------cCCCCCCCCHHHHHHHHHHHcCcc-ccCccCcEEEeCCCc
Confidence            00000000000000                 011235899999999998888642 123456899998765

>PRK08219 short chain dehydrogenase; Provisional

Probab=97.92  E-value=9.9e-05  Score=56.79  Aligned_cols=100  Identities=9%  Similarity=0.089  Sum_probs=65.6

Q ss_pred             CCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCC-ccEEEEecccccCCCCCCCCCCCCCC
Q 028478            6 CKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSE-WKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         6 vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~-~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      .+++|++||...++..           .+...|+.+|.+.+.+++.++....+ +++..++|+.+.++.           
T Consensus       121 ~~~~v~~ss~~~~~~~-----------~~~~~y~~~K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~-----------  178 (227)
T PRK08219        121 HGHVVFINSGAGLRAN-----------PGWGSYAASKFALRALADALREEEPGNVRVTSVHPGRTDTDM-----------  178 (227)
T ss_pred             CCeEEEEcchHhcCcC-----------CCCchHHHHHHHHHHHHHHHHHHhcCCceEEEEecCCccchH-----------
Confidence            4589999997766421           13467999999999999888665434 788888877665431           


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEec
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLG  152 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~  152 (208)
                              ......+.       +      .....+.+++.+|+|++++.++++    ...+.++++.
T Consensus       179 --------~~~~~~~~-------~------~~~~~~~~~~~~dva~~~~~~l~~----~~~~~~~~~~  221 (227)
T PRK08219        179 --------QRGLVAQE-------G------GEYDPERYLRPETVAKAVRFAVDA----PPDAHITEVV  221 (227)
T ss_pred             --------hhhhhhhh-------c------cccCCCCCCCHHHHHHHHHHHHcC----CCCCccceEE
Confidence                    11111111       0      011124579999999999999988    3445667664

>PRK06138 short chain dehydrogenase; Provisional

Probab=97.89  E-value=0.00015  Score=56.77  Aligned_cols=119  Identities=8%  Similarity=-0.025  Sum_probs=73.9

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      +.+.+++|++||.......           ...+.|+.+|.+.+.+++.++.++  .+++++++||+.+.++........
T Consensus       129 ~~~~~~ii~~sS~~~~~~~-----------~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~  197 (252)
T PRK06138        129 RQGGGSIVNTASQLALAGG-----------RGRAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFAR  197 (252)
T ss_pred             hcCCeEEEEECChhhccCC-----------CCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhcc
Confidence            4566789999997544211           124679999999999999887543  279999999999998742211000


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                      ..      -...+.......                .....+++.+|+|++++.++.++. ....|..+.+.++.
T Consensus       198 ~~------~~~~~~~~~~~~----------------~~~~~~~~~~d~a~~~~~l~~~~~-~~~~g~~~~~~~g~  249 (252)
T PRK06138        198 HA------DPEALREALRAR----------------HPMNRFGTAEEVAQAALFLASDES-SFATGTTLVVDGGW  249 (252)
T ss_pred             cc------ChHHHHHHHHhc----------------CCCCCCcCHHHHHHHHHHHcCchh-cCccCCEEEECCCe
Confidence            00      000111111111                011237889999999999998843 23445777776543

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=97.88  E-value=3.2e-05  Score=60.96  Aligned_cols=118  Identities=12%  Similarity=0.037  Sum_probs=72.2

Q ss_pred             CEEEEecccc-ccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhh---cCCCccEEEEecccccCCCCCCCCCCCC
Q 028478            7 KNLVFSSSAT-VYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHR---SDSEWKIILLRYFNPVGAHPSGKIGEDP   82 (208)
Q Consensus         7 k~~i~~SS~~-vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~~~~~~iiR~~~i~G~~~~~~~~~~~   82 (208)
                      .++|++||.. .++.            .....|+.+|.+.+.+++.+..   .+ ++++.++|||.++++...       
T Consensus       134 ~~iv~~ss~~~~~~~------------~~~~~Y~~sKaa~~~l~~~la~e~~~~-gi~v~~v~pg~~~~~~~~-------  193 (259)
T PRK12384        134 GRIIQINSKSGKVGS------------KHNSGYSAAKFGGVGLTQSLALDLAEY-GITVHSLMLGNLLKSPMF-------  193 (259)
T ss_pred             cEEEEecCcccccCC------------CCCchhHHHHHHHHHHHHHHHHHHHHc-CcEEEEEecCCcccchhh-------
Confidence            3899988854 3331            1246799999999888888764   34 899999999998875210       


Q ss_pred             CCCCCChHHHHHHHHhCCCC--eeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           83 RGIPNNLMPFVTQVAVGRRP--ELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                          ..+++.+.... +...  ....+.      ++...+.+++.+|+++++..++.+. .....+++|++.+++.
T Consensus       194 ----~~~~~~~~~~~-~~~~~~~~~~~~------~~~~~~~~~~~~dv~~~~~~l~~~~-~~~~~G~~~~v~~g~~  257 (259)
T PRK12384        194 ----QSLLPQYAKKL-GIKPDEVEQYYI------DKVPLKRGCDYQDVLNMLLFYASPK-ASYCTGQSINVTGGQV  257 (259)
T ss_pred             ----hhhhHHHHHhc-CCChHHHHHHHH------HhCcccCCCCHHHHHHHHHHHcCcc-cccccCceEEEcCCEE
Confidence                01222111000 0000  000111      2233456899999999999988763 2234568999987753

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=97.86  E-value=5.5e-05  Score=59.17  Aligned_cols=119  Identities=13%  Similarity=-0.011  Sum_probs=74.2

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      +.+.+++|++||...+....           ....|+.+|.+.+.+.+.++.+.  .+++++++||+.++++......+.
T Consensus       128 ~~~~~~ii~iss~~~~~~~~-----------~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~  196 (250)
T TIGR03206       128 ERGAGRIVNIASDAARVGSS-----------GEAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGG  196 (250)
T ss_pred             hcCCeEEEEECchhhccCCC-----------CCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhc
Confidence            45667999999987775321           24579999999998888876653  279999999999998632111100


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                      .  .   .-........ ... +.               ..+...+|+|+++..++... .....++++++.++.
T Consensus       197 ~--~---~~~~~~~~~~-~~~-~~---------------~~~~~~~dva~~~~~l~~~~-~~~~~g~~~~~~~g~  248 (250)
T TIGR03206       197 A--E---NPEKLREAFT-RAI-PL---------------GRLGQPDDLPGAILFFSSDD-ASFITGQVLSVSGGL  248 (250)
T ss_pred             c--C---ChHHHHHHHH-hcC-Cc---------------cCCcCHHHHHHHHHHHcCcc-cCCCcCcEEEeCCCc
Confidence            0  0   0000111111 110 11               12456799999999988763 223457899887653

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK06123 short chain dehydrogenase; Provisional

Probab=97.84  E-value=0.00024  Score=55.54  Aligned_cols=108  Identities=13%  Similarity=0.011  Sum_probs=68.0

Q ss_pred             EEEEeccccc-cCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            8 NLVFSSSATV-YGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         8 ~~i~~SS~~v-yg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      ++|++||... ++...           ....|+.+|.+.|.+++.++.+.  .+++++++||+.++++...      .. 
T Consensus       137 ~iv~~sS~~~~~~~~~-----------~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~------~~-  198 (248)
T PRK06123        137 AIVNVSSMAARLGSPG-----------EYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHA------SG-  198 (248)
T ss_pred             EEEEECchhhcCCCCC-----------CccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhh------cc-
Confidence            6899998644 44211           11359999999999998886653  3799999999999997311      00 


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCC
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTG  154 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~  154 (208)
                         .....+... .+.. ++..               +.+++|+++++..++.... ....++.|++.++
T Consensus       199 ---~~~~~~~~~-~~~~-p~~~---------------~~~~~d~a~~~~~l~~~~~-~~~~g~~~~~~gg  247 (248)
T PRK06123        199 ---GEPGRVDRV-KAGI-PMGR---------------GGTAEEVARAILWLLSDEA-SYTTGTFIDVSGG  247 (248)
T ss_pred             ---CCHHHHHHH-HhcC-CCCC---------------CcCHHHHHHHHHHHhCccc-cCccCCEEeecCC
Confidence               001122222 2211 2211               2468999999999887622 2245688888754

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.81  E-value=9.5e-05  Score=57.82  Aligned_cols=117  Identities=9%  Similarity=-0.021  Sum_probs=73.6

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      +.+.++||++||...+..           ..+...|+.+|...+.+++.++.++  .+++++.++|+.+-++....... 
T Consensus       130 ~~~~~~iv~~sS~~~~~~-----------~~~~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~-  197 (251)
T PRK07231        130 GEGGGAIVNVASTAGLRP-----------RPGLGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMG-  197 (251)
T ss_pred             hcCCcEEEEEcChhhcCC-----------CCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhc-
Confidence            356678999999876642           2235689999999999988887653  27899999999997653111000 


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                            ............ .                .....+++++|+|++++.++..+. ....++.+.+.++.
T Consensus       198 ------~~~~~~~~~~~~-~----------------~~~~~~~~~~dva~~~~~l~~~~~-~~~~g~~~~~~gg~  248 (251)
T PRK07231        198 ------EPTPENRAKFLA-T----------------IPLGRLGTPEDIANAALFLASDEA-SWITGVTLVVDGGR  248 (251)
T ss_pred             ------ccChHHHHHHhc-C----------------CCCCCCcCHHHHHHHHHHHhCccc-cCCCCCeEEECCCc
Confidence                  000001111111 1                112347899999999999997632 12345777776554

>PRK08017 oxidoreductase; Provisional

Probab=97.81  E-value=7.2e-05  Score=58.77  Aligned_cols=99  Identities=17%  Similarity=0.101  Sum_probs=63.5

Q ss_pred             ccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhh---cCCCccEEEEecccccCCCCCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHR---SDSEWKIILLRYFNPVGAHPSGKI   78 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~~~~~~iiR~~~i~G~~~~~~~   78 (208)
                      ++.+.+++|++||...+.+           ....+.|+.+|...|.+.+.+..   .. +++++++||+.+..+      
T Consensus       121 ~~~~~~~iv~~ss~~~~~~-----------~~~~~~Y~~sK~~~~~~~~~l~~~~~~~-~i~v~~v~pg~~~t~------  182 (256)
T PRK08017        121 LPHGEGRIVMTSSVMGLIS-----------TPGRGAYAASKYALEAWSDALRMELRHS-GIKVSLIEPGPIRTR------  182 (256)
T ss_pred             hhcCCCEEEEEcCcccccC-----------CCCccHHHHHHHHHHHHHHHHHHHHhhc-CCEEEEEeCCCcccc------
Confidence            3456778999998633321           12346799999999998776533   33 799999999776553      


Q ss_pred             CCCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhh
Q 028478           79 GEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHK  138 (208)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  138 (208)
                                   +......+.. ......      ++...+.+++.+|+++++..++++
T Consensus       183 -------------~~~~~~~~~~-~~~~~~------~~~~~~~~~~~~d~a~~~~~~~~~  222 (256)
T PRK08017        183 -------------FTDNVNQTQS-DKPVEN------PGIAARFTLGPEAVVPKLRHALES  222 (256)
T ss_pred             -------------hhhcccchhh-ccchhh------hHHHhhcCCCHHHHHHHHHHHHhC
Confidence                         1111111110 111111      234456789999999999999988

>PRK06701 short chain dehydrogenase; Provisional

Probab=97.80  E-value=6e-05  Score=60.77  Aligned_cols=110  Identities=15%  Similarity=0.019  Sum_probs=73.2

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      .++|++||...|....           ....|+.+|.+.+.+++.++.++  .++++..++|+.++.+..+.       .
T Consensus       175 g~iV~isS~~~~~~~~-----------~~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~-------~  236 (290)
T PRK06701        175 SAIINTGSITGYEGNE-----------TLIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPS-------D  236 (290)
T ss_pred             CeEEEEecccccCCCC-----------CcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCccccc-------c
Confidence            4799999987774321           13469999999999999988763  27999999999998863211       0


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                         ..-........                 ......+.+.+|+|++++.++... +....+.++++.++.
T Consensus       237 ---~~~~~~~~~~~-----------------~~~~~~~~~~~dva~~~~~ll~~~-~~~~~G~~i~idgg~  286 (290)
T PRK06701        237 ---FDEEKVSQFGS-----------------NTPMQRPGQPEELAPAYVFLASPD-SSYITGQMLHVNGGV  286 (290)
T ss_pred             ---cCHHHHHHHHh-----------------cCCcCCCcCHHHHHHHHHHHcCcc-cCCccCcEEEeCCCc
Confidence               00011111111                 111234789999999999999873 223456888887664

>PRK08324 short chain dehydrogenase; Validated

Probab=97.79  E-value=0.0001  Score=66.34  Aligned_cols=121  Identities=15%  Similarity=0.130  Sum_probs=75.3

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEeccccc-CCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPV-GAHPSGKIGEDPR   83 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~-G~~~~~~~~~~~~   83 (208)
                      .+||++||...+...           .....|+.+|.+.+.+++.++.++  .++.+.+++|+.+| +....      . 
T Consensus       551 g~iV~vsS~~~~~~~-----------~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~------~-  612 (681)
T PRK08324        551 GSIVFIASKNAVNPG-----------PNFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIW------T-  612 (681)
T ss_pred             cEEEEECCccccCCC-----------CCcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccc------c-
Confidence            589999997554311           134689999999999999987654  26999999999998 53210      0 


Q ss_pred             CCCCChHHHHHHHHhCCCCe-e-EEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           84 GIPNNLMPFVTQVAVGRRPE-L-TVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                         +.+.. ......+.... + ..++      .+...+.+++++|+|++++.++... .....++++++.+|..
T Consensus       613 ---~~~~~-~~~~~~g~~~~~~~~~~~------~~~~l~~~v~~~DvA~a~~~l~s~~-~~~~tG~~i~vdgG~~  676 (681)
T PRK08324        613 ---GEWIE-ARAAAYGLSEEELEEFYR------ARNLLKREVTPEDVAEAVVFLASGL-LSKTTGAIITVDGGNA  676 (681)
T ss_pred             ---chhhh-hhhhhccCChHHHHHHHH------hcCCcCCccCHHHHHHHHHHHhCcc-ccCCcCCEEEECCCch
Confidence               00000 00011111000 0 0112      3445678999999999999988531 1235568999987764

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=97.76  E-value=0.00015  Score=56.88  Aligned_cols=119  Identities=14%  Similarity=0.123  Sum_probs=72.0

Q ss_pred             CCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhc---CCCccEEEEecccccCCCCCCCCCCC
Q 028478            5 GCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRS---DSEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      +..++|++||.....           +..+.+.|+.+|.+.+.+++.++.+   + ++.+++++|+.+.++.....+. .
T Consensus       126 ~~g~iv~~ss~~~~~-----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~-~i~v~~i~pg~v~t~~~~~~~~-~  192 (252)
T PRK08220        126 RSGAIVTVGSNAAHV-----------PRIGMAAYGASKAALTSLAKCVGLELAPY-GVRCNVVSPGSTDTDMQRTLWV-D  192 (252)
T ss_pred             CCCEEEEECCchhcc-----------CCCCCchhHHHHHHHHHHHHHHHHHhhHh-CeEEEEEecCcCcchhhhhhcc-c
Confidence            445899999864432           2234578999999999999888765   5 8999999999999974211000 0


Q ss_pred             CCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           82 PRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        82 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                      ... ...... .......                 ......+++++|+|++++.++... .....++++.+.+|.
T Consensus       193 ~~~-~~~~~~~~~~~~~~-----------------~~~~~~~~~~~dva~~~~~l~~~~-~~~~~g~~i~~~gg~  248 (252)
T PRK08220        193 EDG-EQQVIAGFPEQFKL-----------------GIPLGKIARPQEIANAVLFLASDL-ASHITLQDIVVDGGA  248 (252)
T ss_pred             hhh-hhhhhhhHHHHHhh-----------------cCCCcccCCHHHHHHHHHHHhcch-hcCccCcEEEECCCe
Confidence            000 000000 0111111                 111245789999999999988752 223455666666553

>PRK12827 short chain dehydrogenase; Provisional

Probab=97.73  E-value=0.00051  Score=53.52  Aligned_cols=110  Identities=7%  Similarity=-0.091  Sum_probs=71.8

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      +.+.+++|++||...+..           ..+...|+.+|.+.+.+++.++.+.  .+++++++||+.+.++....    
T Consensus       136 ~~~~~~iv~~sS~~~~~~-----------~~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~----  200 (249)
T PRK12827        136 ARRGGRIVNIASVAGVRG-----------NRGQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADN----  200 (249)
T ss_pred             cCCCeEEEEECCchhcCC-----------CCCCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccc----
Confidence            446678999999766532           1235679999999999988887653  27999999999999973210    


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCC
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTG  154 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~  154 (208)
                             ..  .........  ++               ..+.+.+|+|++++.++... .....++.+++.++
T Consensus       201 -------~~--~~~~~~~~~--~~---------------~~~~~~~~va~~~~~l~~~~-~~~~~g~~~~~~~g  247 (249)
T PRK12827        201 -------AA--PTEHLLNPV--PV---------------QRLGEPDEVAALVAFLVSDA-ASYVTGQVIPVDGG  247 (249)
T ss_pred             -------cc--hHHHHHhhC--CC---------------cCCcCHHHHHHHHHHHcCcc-cCCccCcEEEeCCC
Confidence                   01  011121111  11               12457899999999988652 22345678888654

>PRK06128 oxidoreductase; Provisional

Probab=97.72  E-value=0.00058  Score=55.27  Aligned_cols=113  Identities=10%  Similarity=0.047  Sum_probs=74.1

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      .++|++||...|....           ....|+.+|.+.+.+++.++.+.  .++.+.+++||.+.++....      ..
T Consensus       185 ~~iv~~sS~~~~~~~~-----------~~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~------~~  247 (300)
T PRK06128        185 ASIINTGSIQSYQPSP-----------TLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPS------GG  247 (300)
T ss_pred             CEEEEECCccccCCCC-----------CchhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCccc------CC
Confidence            3899999988774211           24569999999999999887652  28999999999999974211      00


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCc
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGT  157 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~  157 (208)
                         ..-..+.......  +               ...+...+|+|.+++.++... .....+++|++.+|..+
T Consensus       248 ---~~~~~~~~~~~~~--p---------------~~r~~~p~dva~~~~~l~s~~-~~~~~G~~~~v~gg~~~  299 (300)
T PRK06128        248 ---QPPEKIPDFGSET--P---------------MKRPGQPVEMAPLYVLLASQE-SSYVTGEVFGVTGGLLL  299 (300)
T ss_pred             ---CCHHHHHHHhcCC--C---------------CCCCcCHHHHHHHHHHHhCcc-ccCccCcEEeeCCCEeC
Confidence               0011221211111  1               123568899999999988752 22345789999887644

>PRK07890 short chain dehydrogenase; Provisional

Probab=97.71  E-value=0.00038  Score=54.73  Aligned_cols=119  Identities=9%  Similarity=0.039  Sum_probs=71.0

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      .++|++||...+.+           ..+...|+.+|.+.+.+++.++.+.  .+++++++||+.++++.....+......
T Consensus       134 ~~ii~~sS~~~~~~-----------~~~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~  202 (258)
T PRK07890        134 GSIVMINSMVLRHS-----------QPKYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGK  202 (258)
T ss_pred             CEEEEEechhhccC-----------CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccc
Confidence            48999999765431           2235689999999999999887643  2799999999999997421111000000


Q ss_pred             CCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           85 IPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        85 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                      . ..-.. ....... .                .....+.+++|+|++++.++.... ....++++.+.++.
T Consensus       203 ~-~~~~~~~~~~~~~-~----------------~~~~~~~~~~dva~a~~~l~~~~~-~~~~G~~i~~~gg~  255 (258)
T PRK07890        203 Y-GVTVEQIYAETAA-N----------------SDLKRLPTDDEVASAVLFLASDLA-RAITGQTLDVNCGE  255 (258)
T ss_pred             c-CCCHHHHHHHHhh-c----------------CCccccCCHHHHHHHHHHHcCHhh-hCccCcEEEeCCcc
Confidence            0 00001 1111111 1                112236789999999999987532 23455776665553

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=97.69  E-value=0.00018  Score=62.77  Aligned_cols=125  Identities=12%  Similarity=0.000  Sum_probs=75.2

Q ss_pred             ccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      ++.|+++||++||..++...    ..+. .......|...|..+|+.+...     +++++++|||.+.++...      
T Consensus       196 ~~agVgRIV~VSSiga~~~g----~p~~-~~~sk~~~~~~KraaE~~L~~s-----GIrvTIVRPG~L~tp~d~------  259 (576)
T PLN03209        196 TVAKVNHFILVTSLGTNKVG----FPAA-ILNLFWGVLCWKRKAEEALIAS-----GLPYTIVRPGGMERPTDA------  259 (576)
T ss_pred             HHhCCCEEEEEccchhcccC----cccc-chhhHHHHHHHHHHHHHHHHHc-----CCCEEEEECCeecCCccc------
Confidence            45688999999998653210    0011 1223455778899999888753     899999999999876210      


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC---cC
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG---TS  158 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~---~s  158 (208)
                      ...             .+   .+.+..      ......-.+.-+|+|++++.++.++.  ...+.+|.+.++..   ..
T Consensus       260 ~~~-------------t~---~v~~~~------~d~~~gr~isreDVA~vVvfLasd~~--as~~kvvevi~~~~~p~~~  315 (576)
T PLN03209        260 YKE-------------TH---NLTLSE------EDTLFGGQVSNLQVAELMACMAKNRR--LSYCKVVEVIAETTAPLTP  315 (576)
T ss_pred             ccc-------------cc---ceeecc------ccccCCCccCHHHHHHHHHHHHcCch--hccceEEEEEeCCCCCCCC
Confidence            000             00   111111      11111124788999999999998632  24458898887652   44


Q ss_pred             HHHHHHHH
Q 028478          159 VLEMVAAF  166 (208)
Q Consensus       159 ~~e~~~~i  166 (208)
                      +.++...|
T Consensus       316 ~~~~~~~i  323 (576)
T PLN03209        316 MEELLAKI  323 (576)
T ss_pred             HHHHHHhc
Confidence            55555444

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=97.67  E-value=0.0018  Score=51.19  Aligned_cols=110  Identities=18%  Similarity=0.157  Sum_probs=82.4

Q ss_pred             CChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCC
Q 028478           35 MNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTK  114 (208)
Q Consensus        35 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  114 (208)
                      ...|..+|...|.++...     +++++++|+...|...         ..    .  +......... ++...+      
T Consensus       115 ~~~~~~~~~~~e~~l~~s-----g~~~t~lr~~~~~~~~---------~~----~--~~~~~~~~~~-~~~~~~------  167 (275)
T COG0702         115 PSALARAKAAVEAALRSS-----GIPYTTLRRAAFYLGA---------GA----A--FIEAAEAAGL-PVIPRG------  167 (275)
T ss_pred             ccHHHHHHHHHHHHHHhc-----CCCeEEEecCeeeecc---------ch----h--HHHHHHhhCC-ceecCC------
Confidence            467999999999999975     8999999976666531         00    0  1223333332 333332      


Q ss_pred             CCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHHHHHHHHHHHhCCCceE
Q 028478          115 DGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKVHIF  176 (208)
Q Consensus       115 ~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~  176 (208)
                        .....++..+|++.++..++..+.   ..+++|.+++++..+..++++.+.+..|++...
T Consensus       168 --~~~~~~i~~~d~a~~~~~~l~~~~---~~~~~~~l~g~~~~~~~~~~~~l~~~~gr~~~~  224 (275)
T COG0702         168 --IGRLSPIAVDDVAEALAAALDAPA---TAGRTYELAGPEALTLAELASGLDYTIGRPVGL  224 (275)
T ss_pred             --CCceeeeEHHHHHHHHHHHhcCCc---ccCcEEEccCCceecHHHHHHHHHHHhCCccee
Confidence              336789999999999999998853   555999999988899999999999999998766

>PRK06181 short chain dehydrogenase; Provisional

Probab=97.67  E-value=0.00032  Score=55.38  Aligned_cols=95  Identities=9%  Similarity=0.004  Sum_probs=63.1

Q ss_pred             CCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCC
Q 028478            6 CKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPR   83 (208)
Q Consensus         6 vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~   83 (208)
                      ..++|++||...+..           ..+...|+.+|...|.+.+.+..+.  .++.+++++|+.+..+..         
T Consensus       129 ~~~iv~~sS~~~~~~-----------~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~---------  188 (263)
T PRK06181        129 RGQIVVVSSLAGLTG-----------VPTRSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIR---------  188 (263)
T ss_pred             CCEEEEEecccccCC-----------CCCccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcc---------
Confidence            458999999776642           1235689999999999988765432  279999999998887521         


Q ss_pred             CCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhh
Q 028478           84 GIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHK  138 (208)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  138 (208)
                                .........+...        .+.....+++++|+|++++.+++.
T Consensus       189 ----------~~~~~~~~~~~~~--------~~~~~~~~~~~~dva~~i~~~~~~  225 (263)
T PRK06181        189 ----------KRALDGDGKPLGK--------SPMQESKIMSAEECAEAILPAIAR  225 (263)
T ss_pred             ----------hhhcccccccccc--------ccccccCCCCHHHHHHHHHHHhhC
Confidence                      1111110001111        122334789999999999999987

>PRK12939 short chain dehydrogenase; Provisional

Probab=97.61  E-value=0.00013  Score=56.95  Aligned_cols=111  Identities=12%  Similarity=0.003  Sum_probs=71.6

Q ss_pred             CCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCC
Q 028478            6 CKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPR   83 (208)
Q Consensus         6 vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~   83 (208)
                      ..++|++||...+...           .....|+.+|.+.|.+++.++.++  .++.+..++|+.+..+....       
T Consensus       135 ~g~iv~isS~~~~~~~-----------~~~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~-------  196 (250)
T PRK12939        135 RGRIVNLASDTALWGA-----------PKLGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAY-------  196 (250)
T ss_pred             CeEEEEECchhhccCC-----------CCcchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccc-------
Confidence            3489999996554321           123579999999999999876543  37899999999887753110       


Q ss_pred             CCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           84 GIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                       ...  ..+.......                 ...+.+++.+|+|++++.++..+. ....|+.+++.++.
T Consensus       197 -~~~--~~~~~~~~~~-----------------~~~~~~~~~~dva~~~~~l~~~~~-~~~~G~~i~~~gg~  247 (250)
T PRK12939        197 -VPA--DERHAYYLKG-----------------RALERLQVPDDVAGAVLFLLSDAA-RFVTGQLLPVNGGF  247 (250)
T ss_pred             -cCC--hHHHHHHHhc-----------------CCCCCCCCHHHHHHHHHHHhCccc-cCccCcEEEECCCc
Confidence             000  0111112111                 112347889999999999997632 23567888887664

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=97.56  E-value=0.0011  Score=51.68  Aligned_cols=110  Identities=14%  Similarity=0.001  Sum_probs=66.9

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      .+||++||...+....          .....|+.+|...|.+++.++.++  .+++++++||+.++++....      ..
T Consensus       135 g~~v~~sS~~~~~~~~----------~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~------~~  198 (247)
T PRK09730        135 GAIVNVSSAASRLGAP----------GEYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHAS------GG  198 (247)
T ss_pred             cEEEEECchhhccCCC----------CcccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCccccc------CC
Confidence            3699999975442111          112359999999999988776432  27999999999999974210      00


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCC
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTG  154 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~  154 (208)
                          ............  ++.               -....+|+|+++..++..... ...+..+++.++
T Consensus       199 ----~~~~~~~~~~~~--~~~---------------~~~~~~dva~~~~~~~~~~~~-~~~g~~~~~~g~  246 (247)
T PRK09730        199 ----EPGRVDRVKSNI--PMQ---------------RGGQPEEVAQAIVWLLSDKAS-YVTGSFIDLAGG  246 (247)
T ss_pred             ----CHHHHHHHHhcC--CCC---------------CCcCHHHHHHHHHhhcChhhc-CccCcEEecCCC
Confidence                111222222211  111               123689999999998876322 245567766543

>PRK06841 short chain dehydrogenase; Provisional

Probab=97.55  E-value=0.00024  Score=55.79  Aligned_cols=113  Identities=10%  Similarity=-0.064  Sum_probs=71.2

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      .+..++|++||......           ......|+.+|.+.+.+.+.++.++  .++.+..++|+.+-.+....     
T Consensus       138 ~~~~~iv~~sS~~~~~~-----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~-----  201 (255)
T PRK06841        138 AGGGKIVNLASQAGVVA-----------LERHVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKK-----  201 (255)
T ss_pred             cCCceEEEEcchhhccC-----------CCCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCccccc-----
Confidence            35568999999654311           1124579999999999888877653  27999999999888753110     


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                        . ...  ........ .   +             ....+.+.+|+|++++.++..+ .....|+.+.+.++.
T Consensus       202 --~-~~~--~~~~~~~~-~---~-------------~~~~~~~~~~va~~~~~l~~~~-~~~~~G~~i~~dgg~  252 (255)
T PRK06841        202 --A-WAG--EKGERAKK-L---I-------------PAGRFAYPEEIAAAALFLASDA-AAMITGENLVIDGGY  252 (255)
T ss_pred             --c-cch--hHHHHHHh-c---C-------------CCCCCcCHHHHHHHHHHHcCcc-ccCccCCEEEECCCc
Confidence              0 000  01111111 1   1             1234789999999999999763 223556888777654

>PRK07577 short chain dehydrogenase; Provisional

Probab=97.54  E-value=0.00031  Score=54.35  Aligned_cols=115  Identities=11%  Similarity=-0.074  Sum_probs=71.7

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      +.+..++|++||...|+..            ....|+.+|.+.|.+++.++.+.  .++.++++||+.+..+.....   
T Consensus       116 ~~~~~~iv~~sS~~~~~~~------------~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~---  180 (234)
T PRK07577        116 LREQGRIVNICSRAIFGAL------------DRTSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQT---  180 (234)
T ss_pred             HcCCcEEEEEccccccCCC------------CchHHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccc---
Confidence            4566799999998766521            24679999999999988776532  289999999999987631100   


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                         .  ..............  ++               ..+...+|+|++++.++..+. ....++.+.+.++.
T Consensus       181 ---~--~~~~~~~~~~~~~~--~~---------------~~~~~~~~~a~~~~~l~~~~~-~~~~g~~~~~~g~~  232 (234)
T PRK07577        181 ---R--PVGSEEEKRVLASI--PM---------------RRLGTPEEVAAAIAFLLSDDA-GFITGQVLGVDGGG  232 (234)
T ss_pred             ---c--ccchhHHHHHhhcC--CC---------------CCCcCHHHHHHHHHHHhCccc-CCccceEEEecCCc
Confidence               0  00000111111111  11               113477999999999987632 23456788776554

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=97.52  E-value=0.0015  Score=50.59  Aligned_cols=110  Identities=11%  Similarity=0.029  Sum_probs=69.7

Q ss_pred             CCCCEEEEeccc-cccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSA-TVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         4 ~~vk~~i~~SS~-~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      .+.++++++||. .++|..            +...|+.+|.+.+.+++.++++.  +++.++++||+.+.++..      
T Consensus       125 ~~~~~~v~~sS~~~~~g~~------------~~~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~------  186 (239)
T TIGR01830       125 QRSGRIINISSVVGLMGNA------------GQANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMT------  186 (239)
T ss_pred             cCCeEEEEECCccccCCCC------------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhh------
Confidence            345689999995 455421            24679999999998888876542  389999999998866421      


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCC
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTG  154 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~  154 (208)
                        .    .+...+.....+.. ++               .-+.+++|+|++++.++... .....+++||+.++
T Consensus       187 --~----~~~~~~~~~~~~~~-~~---------------~~~~~~~~~a~~~~~~~~~~-~~~~~g~~~~~~~g  237 (239)
T TIGR01830       187 --D----KLSEKVKKKILSQI-PL---------------GRFGTPEEVANAVAFLASDE-ASYITGQVIHVDGG  237 (239)
T ss_pred             --h----hcChHHHHHHHhcC-Cc---------------CCCcCHHHHHHHHHHHhCcc-cCCcCCCEEEeCCC
Confidence              0    01111111112211 11               12567899999999888652 22356689999755

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK06182 short chain dehydrogenase; Validated

Probab=97.50  E-value=0.00074  Score=53.74  Aligned_cols=59  Identities=12%  Similarity=-0.010  Sum_probs=43.2

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhh---cCCCccEEEEecccccCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHR---SDSEWKIILLRYFNPVGAH   73 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~~~~~~iiR~~~i~G~~   73 (208)
                      +.+..++|++||...+...           .....|+.+|.+.+.+.+.++.   .+ +++++++||+.+.++.
T Consensus       122 ~~~~g~iv~isS~~~~~~~-----------~~~~~Y~~sKaa~~~~~~~l~~e~~~~-gi~v~~v~Pg~v~t~~  183 (273)
T PRK06182        122 AQRSGRIINISSMGGKIYT-----------PLGAWYHATKFALEGFSDALRLEVAPF-GIDVVVIEPGGIKTEW  183 (273)
T ss_pred             hcCCCEEEEEcchhhcCCC-----------CCccHhHHHHHHHHHHHHHHHHHhccc-CCEEEEEecCCccccc
Confidence            4566789999996432110           1234699999999998876653   34 8999999999998863

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.49  E-value=0.002  Score=50.31  Aligned_cols=104  Identities=10%  Similarity=-0.007  Sum_probs=70.5

Q ss_pred             EEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCCC
Q 028478            8 NLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRGI   85 (208)
Q Consensus         8 ~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~~   85 (208)
                      +++++||...++..            +...|+.+|.+.+.+++.++.+.  .+++++.++|+.+.++...          
T Consensus       145 ~iv~~ss~~~~~~~------------~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~----------  202 (253)
T PRK08217        145 VIINISSIARAGNM------------GQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTA----------  202 (253)
T ss_pred             EEEEEccccccCCC------------CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcccc----------
Confidence            68889887766531            34679999999999988887542  2799999999999886311          


Q ss_pred             CCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           86 PNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        86 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                        .+.+ .........  +               .+.+.+.+|+|+++..++..   ....+++|++.++.
T Consensus       203 --~~~~~~~~~~~~~~--~---------------~~~~~~~~~~a~~~~~l~~~---~~~~g~~~~~~gg~  251 (253)
T PRK08217        203 --AMKPEALERLEKMI--P---------------VGRLGEPEEIAHTVRFIIEN---DYVTGRVLEIDGGL  251 (253)
T ss_pred             --ccCHHHHHHHHhcC--C---------------cCCCcCHHHHHHHHHHHHcC---CCcCCcEEEeCCCc
Confidence              0112 222222211  1               22356889999999999865   23467899988764

>PRK09134 short chain dehydrogenase; Provisional

Probab=97.48  E-value=0.00088  Score=52.78  Aligned_cols=110  Identities=10%  Similarity=0.010  Sum_probs=69.9

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC-CCccEEEEecccccCCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD-SEWKIILLRYFNPVGAHPSGKIGEDPRGI   85 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~iiR~~~i~G~~~~~~~~~~~~~~   85 (208)
                      .++|+++|...+..           ......|+.+|.+.|.+.+.+++++ +.+.++.++||.+....         .. 
T Consensus       139 ~~iv~~~s~~~~~~-----------~p~~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~---------~~-  197 (258)
T PRK09134        139 GLVVNMIDQRVWNL-----------NPDFLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSG---------RQ-  197 (258)
T ss_pred             ceEEEECchhhcCC-----------CCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCc---------cc-
Confidence            46777776544321           1123479999999999999987764 35899999998887631         00 


Q ss_pred             CCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHH
Q 028478           86 PNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVL  160 (208)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~  160 (208)
                         ....+.......  +   .        +    ...+++|+|++++.+++.+   ...++.|++.++..+++.
T Consensus       198 ---~~~~~~~~~~~~--~---~--------~----~~~~~~d~a~~~~~~~~~~---~~~g~~~~i~gg~~~~~~  249 (258)
T PRK09134        198 ---SPEDFARQHAAT--P---L--------G----RGSTPEEIAAAVRYLLDAP---SVTGQMIAVDGGQHLAWL  249 (258)
T ss_pred             ---ChHHHHHHHhcC--C---C--------C----CCcCHHHHHHHHHHHhcCC---CcCCCEEEECCCeecccc
Confidence               011222222211  1   1        1    1367899999999999873   355688988877655543

>PRK08264 short chain dehydrogenase; Validated

Probab=97.48  E-value=0.00076  Score=52.37  Aligned_cols=58  Identities=9%  Similarity=-0.009  Sum_probs=45.0

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGA   72 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~   72 (208)
                      .+..++|++||...+..           ..+...|+.+|.+.|.+.+.++.+.  .+++++++||+.+.++
T Consensus       123 ~~~~~~v~~sS~~~~~~-----------~~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~  182 (238)
T PRK08264        123 NGGGAIVNVLSVLSWVN-----------FPNLGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTD  182 (238)
T ss_pred             cCCCEEEEEcChhhccC-----------CCCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCccccc
Confidence            45678999999766542           1235689999999999998876543  2799999999999876

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=97.46  E-value=0.0018  Score=50.30  Aligned_cols=110  Identities=10%  Similarity=0.002  Sum_probs=69.4

Q ss_pred             CCCCEEEEeccc-cccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSA-TVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         4 ~~vk~~i~~SS~-~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      .+.+++|++||. ++++..            ....|+.+|.+.+.+++.++...  .++.+++++|+.+-++..      
T Consensus       132 ~~~~~~v~iss~~~~~~~~------------~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~------  193 (248)
T PRK05557        132 QRSGRIINISSVVGLMGNP------------GQANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMT------  193 (248)
T ss_pred             cCCeEEEEEcccccCcCCC------------CCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccc------
Confidence            456789999985 344421            24679999999998888776532  278999999988765421      


Q ss_pred             CCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           81 DPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        81 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                        .    .+.. .........                 ....+.+.+|+|+++..++... .....++.|++.++.
T Consensus       194 --~----~~~~~~~~~~~~~~-----------------~~~~~~~~~~va~~~~~l~~~~-~~~~~g~~~~i~~~~  245 (248)
T PRK05557        194 --D----ALPEDVKEAILAQI-----------------PLGRLGQPEEIASAVAFLASDE-AAYITGQTLHVNGGM  245 (248)
T ss_pred             --c----ccChHHHHHHHhcC-----------------CCCCCcCHHHHHHHHHHHcCcc-cCCccccEEEecCCc
Confidence              0    1111 222222111                 1123678999999998887652 223566899998654

>PRK06523 short chain dehydrogenase; Provisional

Probab=97.46  E-value=0.001  Score=52.44  Aligned_cols=130  Identities=7%  Similarity=-0.054  Sum_probs=73.3

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      .+..++|++||...+...          ..+...|+.+|.+.+.+++.++.++  .++.+.+++||.+.++.........
T Consensus       128 ~~~g~ii~isS~~~~~~~----------~~~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~  197 (260)
T PRK06523        128 RGSGVIIHVTSIQRRLPL----------PESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERL  197 (260)
T ss_pred             cCCcEEEEEecccccCCC----------CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHH
Confidence            345689999997654311          1135689999999999988887653  2799999999999886311000000


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcC
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTS  158 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s  158 (208)
                      ........-.....+.... ..++             ..-+...+|+|+++..++... .....++.+.+.++...+
T Consensus       198 ~~~~~~~~~~~~~~~~~~~-~~~p-------------~~~~~~~~~va~~~~~l~s~~-~~~~~G~~~~vdgg~~~~  259 (260)
T PRK06523        198 AEAAGTDYEGAKQIIMDSL-GGIP-------------LGRPAEPEEVAELIAFLASDR-AASITGTEYVIDGGTVPT  259 (260)
T ss_pred             HhhcCCCHHHHHHHHHHHh-ccCc-------------cCCCCCHHHHHHHHHHHhCcc-cccccCceEEecCCccCC
Confidence            0000000000000111000 0011             112457899999999998752 223556888887776443

>PRK08628 short chain dehydrogenase; Provisional

Probab=97.46  E-value=0.00094  Score=52.55  Aligned_cols=117  Identities=11%  Similarity=0.039  Sum_probs=71.2

Q ss_pred             CCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCC
Q 028478            6 CKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPR   83 (208)
Q Consensus         6 vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~   83 (208)
                      ..+||++||...+..           ..+...|+.+|.+.|.+++.++.+.  .++.++.++|+.++++.......    
T Consensus       132 ~~~iv~~ss~~~~~~-----------~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~----  196 (258)
T PRK08628        132 RGAIVNISSKTALTG-----------QGGTSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIA----  196 (258)
T ss_pred             CcEEEEECCHHhccC-----------CCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhh----
Confidence            358999999665421           1235689999999999999887532  27999999999999973110000    


Q ss_pred             CCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           84 GIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                      .. ............ .   +++         +   ..++..+|+|++++.++.... ....++.+.+.++.
T Consensus       197 ~~-~~~~~~~~~~~~-~---~~~---------~---~~~~~~~dva~~~~~l~~~~~-~~~~g~~~~~~gg~  250 (258)
T PRK08628        197 TF-DDPEAKLAAITA-K---IPL---------G---HRMTTAEEIADTAVFLLSERS-SHTTGQWLFVDGGY  250 (258)
T ss_pred             hc-cCHHHHHHHHHh-c---CCc---------c---ccCCCHHHHHHHHHHHhChhh-ccccCceEEecCCc
Confidence            00 000001111111 1   111         1   236788999999999998732 23455777776554

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=97.45  E-value=0.00044  Score=54.10  Aligned_cols=66  Identities=11%  Similarity=0.035  Sum_probs=47.7

Q ss_pred             CEEEEeccccccCCCCCCCCCCC----------------CCCCCCChHHHhHHHHHHHHHHHh-h---cCCCccEEEEec
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEE----------------FPLEAMNPYGRTKLFIEEICRDVH-R---SDSEWKIILLRY   66 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~----------------~~~~p~~~Y~~sK~~~E~~~~~~~-~---~~~~~~~~iiR~   66 (208)
                      .+||++||...++.....+..|.                .+..+...|+.+|.+.+.+.+.++ .   .+ ++.+.+++|
T Consensus        90 g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~e~~~~-girvn~v~P  168 (241)
T PRK12428         90 GAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALILWTMRQAQPWFGAR-GIRVNCVAP  168 (241)
T ss_pred             cEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHHHHHHHHHHHhhhcc-CeEEEEeec
Confidence            48999999988863222111111                234456789999999999988877 3   34 799999999


Q ss_pred             ccccCCC
Q 028478           67 FNPVGAH   73 (208)
Q Consensus        67 ~~i~G~~   73 (208)
                      |.+.++.
T Consensus       169 G~v~T~~  175 (241)
T PRK12428        169 GPVFTPI  175 (241)
T ss_pred             CCccCcc
Confidence            9998863

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=97.43  E-value=0.0016  Score=50.64  Aligned_cols=113  Identities=12%  Similarity=-0.011  Sum_probs=72.3

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      .+..+||++||...+...           .....|+.+|.+.+.+++.++.+.  .++.+.+++|+.+.++....     
T Consensus       129 ~~~~~iv~iss~~~~~~~-----------~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~-----  192 (245)
T PRK12824        129 QGYGRIINISSVNGLKGQ-----------FGQTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQ-----  192 (245)
T ss_pred             hCCeEEEEECChhhccCC-----------CCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhh-----
Confidence            456699999997665321           124579999999998888876532  27999999999998863110     


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                             +............ +               ...+...+|+++++..++... .....|+.+++.++..
T Consensus       193 -------~~~~~~~~~~~~~-~---------------~~~~~~~~~va~~~~~l~~~~-~~~~~G~~~~~~~g~~  243 (245)
T PRK12824        193 -------MGPEVLQSIVNQI-P---------------MKRLGTPEEIAAAVAFLVSEA-AGFITGETISINGGLY  243 (245)
T ss_pred             -------cCHHHHHHHHhcC-C---------------CCCCCCHHHHHHHHHHHcCcc-ccCccCcEEEECCCee
Confidence                   0111111111110 1               123457899999998888653 2235678999987754

>PRK05650 short chain dehydrogenase; Provisional

Probab=97.42  E-value=0.0036  Score=49.69  Aligned_cols=60  Identities=12%  Similarity=-0.080  Sum_probs=45.3

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAH   73 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~   73 (208)
                      +.+..++|++||...+..           ....+.|+.+|.+.+.+.+.++.+.  .++.+++++|+.+.++.
T Consensus       125 ~~~~~~iv~vsS~~~~~~-----------~~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~  186 (270)
T PRK05650        125 RQKSGRIVNIASMAGLMQ-----------GPAMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNL  186 (270)
T ss_pred             hCCCCEEEEECChhhcCC-----------CCCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCc
Confidence            456679999999766532           1235689999999888887776653  27899999999998763

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=97.34  E-value=0.00086  Score=52.57  Aligned_cols=59  Identities=15%  Similarity=0.151  Sum_probs=45.2

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGA   72 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~   72 (208)
                      +.+..++|++||...+.           +..+.+.|+.+|.+.+.+.+.++.+.  .++.+.+++||.+.|+
T Consensus       123 ~~~~~~iv~isS~~~~~-----------~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~  183 (248)
T PRK10538        123 ERNHGHIINIGSTAGSW-----------PYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGT  183 (248)
T ss_pred             hcCCcEEEEECCcccCC-----------CCCCCchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeeccc
Confidence            45667899999965431           12335689999999999998887653  2799999999999875

>PRK07041 short chain dehydrogenase; Provisional

Probab=97.28  E-value=0.0027  Score=49.00  Aligned_cols=114  Identities=11%  Similarity=-0.098  Sum_probs=71.3

Q ss_pred             CCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            5 GCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      +..++|++||...+..           ..+.+.|+.+|.+.+.+++.++.+..++.++.++|+.+-.+....       .
T Consensus       115 ~~g~iv~~ss~~~~~~-----------~~~~~~Y~~sK~a~~~~~~~la~e~~~irv~~i~pg~~~t~~~~~-------~  176 (230)
T PRK07041        115 PGGSLTFVSGFAAVRP-----------SASGVLQGAINAALEALARGLALELAPVRVNTVSPGLVDTPLWSK-------L  176 (230)
T ss_pred             CCeEEEEECchhhcCC-----------CCcchHHHHHHHHHHHHHHHHHHHhhCceEEEEeecccccHHHHh-------h
Confidence            4468999999877642           123568999999999999998776535788888988776542100       0


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                      ........+.......  ++               ..+...+|+|+++..++...   ...++.|++.++.+
T Consensus       177 ~~~~~~~~~~~~~~~~--~~---------------~~~~~~~dva~~~~~l~~~~---~~~G~~~~v~gg~~  228 (230)
T PRK07041        177 AGDAREAMFAAAAERL--PA---------------RRVGQPEDVANAILFLAANG---FTTGSTVLVDGGHA  228 (230)
T ss_pred             hccchHHHHHHHHhcC--CC---------------CCCcCHHHHHHHHHHHhcCC---CcCCcEEEeCCCee
Confidence            0000111222221111  11               11346799999999999762   24568998887654

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=97.27  E-value=0.0045  Score=48.73  Aligned_cols=115  Identities=10%  Similarity=0.012  Sum_probs=71.2

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      .+..++|++||...+.....       ...+...|+.+|.+.|.+++.++.++  .++.+.+++|+.+-.+..       
T Consensus       139 ~~~~~~v~~sS~~~~~~~~~-------~~~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~-------  204 (259)
T PRK08213        139 RGYGRIINVASVAGLGGNPP-------EVMDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMT-------  204 (259)
T ss_pred             cCCeEEEEECChhhccCCCc-------cccCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcch-------
Confidence            35668999999765532111       01245789999999999999987754  278899999987765421       


Q ss_pred             CCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           82 PRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        82 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                           ..+.+ +......+.  ++.               -+...+|+|+++..++... .....|+.+++.++.
T Consensus       205 -----~~~~~~~~~~~~~~~--~~~---------------~~~~~~~va~~~~~l~~~~-~~~~~G~~~~~~~~~  256 (259)
T PRK08213        205 -----RGTLERLGEDLLAHT--PLG---------------RLGDDEDLKGAALLLASDA-SKHITGQILAVDGGV  256 (259)
T ss_pred             -----hhhhHHHHHHHHhcC--CCC---------------CCcCHHHHHHHHHHHhCcc-ccCccCCEEEECCCe
Confidence                 11222 222222221  222               1346799999988888652 223556777776543

>PRK12747 short chain dehydrogenase; Provisional

Probab=97.27  E-value=0.0015  Score=51.26  Aligned_cols=110  Identities=15%  Similarity=0.039  Sum_probs=69.2

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      .++|++||...+..           ......|+.+|.+.+.+++.++.++  .++.+..+.||.|.++.....       
T Consensus       138 g~iv~isS~~~~~~-----------~~~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~-------  199 (252)
T PRK12747        138 SRIINISSAATRIS-----------LPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAEL-------  199 (252)
T ss_pred             CeEEEECCcccccC-----------CCCchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhc-------
Confidence            38999999765532           1234689999999999998876653  279999999999988631100       


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCC
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTG  154 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~  154 (208)
                      ...   +.........              .+  ...+...+|+|+++..++... .....++.+.+.++
T Consensus       200 ~~~---~~~~~~~~~~--------------~~--~~~~~~~~dva~~~~~l~s~~-~~~~~G~~i~vdgg  249 (252)
T PRK12747        200 LSD---PMMKQYATTI--------------SA--FNRLGEVEDIADTAAFLASPD-SRWVTGQLIDVSGG  249 (252)
T ss_pred             ccC---HHHHHHHHhc--------------Cc--ccCCCCHHHHHHHHHHHcCcc-ccCcCCcEEEecCC
Confidence            000   0111111111              01  123678999999999987652 22345677777654

>PRK07985 oxidoreductase; Provisional

Probab=97.26  E-value=0.0008  Score=54.37  Aligned_cols=111  Identities=14%  Similarity=0.097  Sum_probs=70.7

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      .++|++||...+...           .....|+.+|.+.+.+++.++.+.  .++++.+++|+.|.++....      ..
T Consensus       179 g~iv~iSS~~~~~~~-----------~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~------~~  241 (294)
T PRK07985        179 ASIITTSSIQAYQPS-----------PHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQIS------GG  241 (294)
T ss_pred             CEEEEECCchhccCC-----------CCcchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccc------cC
Confidence            489999998776421           123579999999999998887652  18999999999999974210      00


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                      ...   ....... .. .++               ..+...+|+|.++..++... .....++++.+.+|.
T Consensus       242 ~~~---~~~~~~~-~~-~~~---------------~r~~~pedva~~~~fL~s~~-~~~itG~~i~vdgG~  291 (294)
T PRK07985        242 QTQ---DKIPQFG-QQ-TPM---------------KRAGQPAELAPVYVYLASQE-SSYVTAEVHGVCGGE  291 (294)
T ss_pred             CCH---HHHHHHh-cc-CCC---------------CCCCCHHHHHHHHHhhhChh-cCCccccEEeeCCCe
Confidence            000   0111111 11 011               12467899999999998763 223556777776654

>PRK06179 short chain dehydrogenase; Provisional

Probab=97.25  E-value=0.01  Score=46.99  Aligned_cols=61  Identities=15%  Similarity=0.072  Sum_probs=46.3

Q ss_pred             ccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAH   73 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~   73 (208)
                      ++.+.++||++||...+..           ......|+.+|...|.+.+.++.+.  .++++++++|+.+.++.
T Consensus       120 ~~~~~~~iv~isS~~~~~~-----------~~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~  182 (270)
T PRK06179        120 RAQGSGRIINISSVLGFLP-----------APYMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNF  182 (270)
T ss_pred             HhcCCceEEEECCccccCC-----------CCCccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCccccc
Confidence            3567789999999755432           1124679999999999988876542  28999999999998864

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=97.20  E-value=0.0032  Score=50.16  Aligned_cols=119  Identities=10%  Similarity=0.031  Sum_probs=72.1

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      .+..++|++||...+..           ..+...|+.+|.+.+.+++.++.++  .++++..++|+.+..+...... ..
T Consensus       151 ~~~g~ii~isS~~~~~~-----------~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~-~~  218 (278)
T PRK08277        151 RKGGNIINISSMNAFTP-----------LTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALL-FN  218 (278)
T ss_pred             cCCcEEEEEccchhcCC-----------CCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhh-cc
Confidence            34458999999877642           2235679999999999999887765  3799999999999887321100 00


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCC
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTG  154 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~  154 (208)
                      ...   ........... .. +               ..-+...+|+|++++.++.........|+.+.+.+|
T Consensus       219 ~~~---~~~~~~~~~~~-~~-p---------------~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG  271 (278)
T PRK08277        219 EDG---SLTERANKILA-HT-P---------------MGRFGKPEELLGTLLWLADEKASSFVTGVVLPVDGG  271 (278)
T ss_pred             ccc---cchhHHHHHhc-cC-C---------------ccCCCCHHHHHHHHHHHcCccccCCcCCCEEEECCC
Confidence            000   00001111111 10 1               122567899999999987651222355677777655

>PRK07069 short chain dehydrogenase; Validated

Probab=97.17  E-value=0.0025  Score=49.74  Aligned_cols=60  Identities=10%  Similarity=0.014  Sum_probs=45.0

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC----CCccEEEEecccccCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD----SEWKIILLRYFNPVGAH   73 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~iiR~~~i~G~~   73 (208)
                      +.+.+++|++||...+....           ....|+.+|.+.+.+++.++.+.    .++.+..++|+.+.++.
T Consensus       127 ~~~~~~ii~~ss~~~~~~~~-----------~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~  190 (251)
T PRK07069        127 ASQPASIVNISSVAAFKAEP-----------DYTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGI  190 (251)
T ss_pred             hcCCcEEEEecChhhccCCC-----------CCchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcc
Confidence            44567999999987764321           24579999999999998876542    24888999999988863

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=97.13  E-value=0.0014  Score=51.28  Aligned_cols=111  Identities=5%  Similarity=-0.045  Sum_probs=69.7

Q ss_pred             CCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCC
Q 028478            6 CKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPR   83 (208)
Q Consensus         6 vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~   83 (208)
                      ..++|++||...+.+..           ....|+.+|.+.+.+.+.++.+.  .++++++++||.+..+....       
T Consensus       132 ~g~iv~~sS~~~~~~~~-----------~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~-------  193 (248)
T TIGR01832       132 GGKIINIASMLSFQGGI-----------RVPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQA-------  193 (248)
T ss_pred             CeEEEEEecHHhccCCC-----------CCchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhc-------
Confidence            35899999987775321           23479999999999999987764  27999999999998762110       


Q ss_pred             CCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCC
Q 028478           84 GIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTG  154 (208)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~  154 (208)
                      . ...  ..........   ++             ...++..+|+|++++.++.... ....|+++.+.++
T Consensus       194 ~-~~~--~~~~~~~~~~---~~-------------~~~~~~~~dva~~~~~l~s~~~-~~~~G~~i~~dgg  244 (248)
T TIGR01832       194 L-RAD--EDRNAAILER---IP-------------AGRWGTPDDIGGPAVFLASSAS-DYVNGYTLAVDGG  244 (248)
T ss_pred             c-ccC--hHHHHHHHhc---CC-------------CCCCcCHHHHHHHHHHHcCccc-cCcCCcEEEeCCC
Confidence            0 000  0111111111   11             1347889999999999987532 2234566655443

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.12  E-value=0.0015  Score=51.18  Aligned_cols=112  Identities=10%  Similarity=0.031  Sum_probs=71.3

Q ss_pred             CCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCC
Q 028478            5 GCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDP   82 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~   82 (208)
                      +..++|++||....           .+..+.+.|+.+|.+.|.+++.+++++  .++.+..++||.+-.+...       
T Consensus       137 ~~g~iv~iss~~~~-----------~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~-------  198 (253)
T PRK08642        137 GFGRIINIGTNLFQ-----------NPVVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDAS-------  198 (253)
T ss_pred             CCeEEEEECCcccc-----------CCCCCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhh-------
Confidence            44589999885322           123356789999999999999987763  2788999999888764211       


Q ss_pred             CCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           83 RGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                      ..    ..+.........   .++             ..+.+.+|+|+++..++..+ .....|+.+.+.++.
T Consensus       199 ~~----~~~~~~~~~~~~---~~~-------------~~~~~~~~va~~~~~l~~~~-~~~~~G~~~~vdgg~  250 (253)
T PRK08642        199 AA----TPDEVFDLIAAT---TPL-------------RKVTTPQEFADAVLFFASPW-ARAVTGQNLVVDGGL  250 (253)
T ss_pred             cc----CCHHHHHHHHhc---CCc-------------CCCCCHHHHHHHHHHHcCch-hcCccCCEEEeCCCe
Confidence            00    011111222221   111             23688999999999999763 234666777776553

>PLN02253 xanthoxin dehydrogenase

Probab=97.12  E-value=0.0062  Score=48.54  Aligned_cols=124  Identities=12%  Similarity=0.011  Sum_probs=71.2

Q ss_pred             CEEEEeccccc-cCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATV-YGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPR   83 (208)
Q Consensus         7 k~~i~~SS~~v-yg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~   83 (208)
                      .++|++||... ++..            ....|+.+|.+.|.+.+.++.+.  .++.+.+++|+.+.++......  ...
T Consensus       148 g~ii~isS~~~~~~~~------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~--~~~  213 (280)
T PLN02253        148 GSIVSLCSVASAIGGL------------GPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHL--PED  213 (280)
T ss_pred             ceEEEecChhhcccCC------------CCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccccccccc--ccc
Confidence            36788877443 3321            13479999999999999887754  3799999999999875311000  000


Q ss_pred             CCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHH
Q 028478           84 GIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVL  160 (208)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~  160 (208)
                      ......+..+........ ++              ....++.+|+|++++.++... .....++.+++.+|...+..
T Consensus       214 ~~~~~~~~~~~~~~~~~~-~l--------------~~~~~~~~dva~~~~~l~s~~-~~~i~G~~i~vdgG~~~~~~  274 (280)
T PLN02253        214 ERTEDALAGFRAFAGKNA-NL--------------KGVELTVDDVANAVLFLASDE-ARYISGLNLMIDGGFTCTNH  274 (280)
T ss_pred             cchhhhhhhhHHHhhcCC-CC--------------cCCCCCHHHHHHHHHhhcCcc-cccccCcEEEECCchhhccc
Confidence            000011111111111110 11              112468999999999998752 22345688888776544433

>PRK06398 aldose dehydrogenase; Validated

Probab=97.12  E-value=0.0058  Score=48.23  Aligned_cols=123  Identities=8%  Similarity=-0.054  Sum_probs=71.9

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC-CCccEEEEecccccCCCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD-SEWKIILLRYFNPVGAHPSGKIGEDP   82 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~iiR~~~i~G~~~~~~~~~~~   82 (208)
                      .+..++|++||...+..           ..+...|+.+|.+.+.+.+.++.++ +.+.+..++||.+-.+..........
T Consensus       121 ~~~g~iv~isS~~~~~~-----------~~~~~~Y~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~  189 (258)
T PRK06398        121 QDKGVIINIASVQSFAV-----------TRNAAAYVTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEV  189 (258)
T ss_pred             cCCeEEEEeCcchhccC-----------CCCCchhhhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccc
Confidence            34568999999766532           2345789999999999999987765 34889999999886652111000000


Q ss_pred             CCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           83 RGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                      ................                 ......+...+|+|+++..++... .....++.+.+.+|.
T Consensus       190 ~~~~~~~~~~~~~~~~-----------------~~~~~~~~~p~eva~~~~~l~s~~-~~~~~G~~i~~dgg~  244 (258)
T PRK06398        190 GKDPEHVERKIREWGE-----------------MHPMKRVGKPEEVAYVVAFLASDL-ASFITGECVTVDGGL  244 (258)
T ss_pred             cCChhhhHHHHHhhhh-----------------cCCcCCCcCHHHHHHHHHHHcCcc-cCCCCCcEEEECCcc
Confidence            0000000001111100                 011123567899999999988753 223456777776654

>PRK05993 short chain dehydrogenase; Provisional

Probab=97.08  E-value=0.0047  Score=49.27  Aligned_cols=60  Identities=18%  Similarity=0.119  Sum_probs=44.9

Q ss_pred             ccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCC
Q 028478            2 AAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGA   72 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~   72 (208)
                      ++.+..+||++||...+.           +..+...|+.+|.+.|.+.+.++.+.  .++.+++++||.+-.+
T Consensus       123 ~~~~~g~iv~isS~~~~~-----------~~~~~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~  184 (277)
T PRK05993        123 RKQGQGRIVQCSSILGLV-----------PMKYRGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETR  184 (277)
T ss_pred             hhcCCCEEEEECChhhcC-----------CCCccchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCc
Confidence            345677999999965442           12345689999999999988876432  2899999999988765

>PRK12937 short chain dehydrogenase; Provisional

Probab=97.06  E-value=0.0074  Score=46.91  Aligned_cols=109  Identities=12%  Similarity=0.008  Sum_probs=67.9

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      .++|++||...+..           ..+.+.|+.+|.+.+.+++.++.++  .++.+++++|+.+-.+...       ..
T Consensus       133 ~~iv~~ss~~~~~~-----------~~~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~-------~~  194 (245)
T PRK12937        133 GRIINLSTSVIALP-----------LPGYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFF-------NG  194 (245)
T ss_pred             cEEEEEeeccccCC-----------CCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhc-------cc
Confidence            47999988654321           2235689999999999998886653  3789999999887764210       00


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCC
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTG  154 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~  154 (208)
                         .....+.......  ++               .-+.+.+|+|+.+..++..+ .....++.+++.++
T Consensus       195 ---~~~~~~~~~~~~~--~~---------------~~~~~~~d~a~~~~~l~~~~-~~~~~g~~~~~~~g  243 (245)
T PRK12937        195 ---KSAEQIDQLAGLA--PL---------------ERLGTPEEIAAAVAFLAGPD-GAWVNGQVLRVNGG  243 (245)
T ss_pred             ---CCHHHHHHHHhcC--CC---------------CCCCCHHHHHHHHHHHcCcc-ccCccccEEEeCCC
Confidence               0011222222211  11               12457799999999988663 22355688887654

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.03  E-value=0.0092  Score=46.88  Aligned_cols=118  Identities=12%  Similarity=-0.061  Sum_probs=71.9

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      .+..++|++||...++..          ......|+.+|.+.+.+++.++.+.  .++.+.+++|+.+-.+....     
T Consensus       128 ~~~g~iv~isS~~~~~~~----------~~~~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~-----  192 (255)
T PRK06463        128 SKNGAIVNIASNAGIGTA----------AEGTTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLS-----  192 (255)
T ss_pred             cCCcEEEEEcCHHhCCCC----------CCCccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhc-----
Confidence            344589999998766421          1224679999999999999987653  27999999999886542110     


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                       .. ...-...+......+. +               .+.+...+|+|++++.++.... ....|+.+.+.+|.
T Consensus       193 -~~-~~~~~~~~~~~~~~~~-~---------------~~~~~~~~~va~~~~~l~s~~~-~~~~G~~~~~dgg~  247 (255)
T PRK06463        193 -GK-SQEEAEKLRELFRNKT-V---------------LKTTGKPEDIANIVLFLASDDA-RYITGQVIVADGGR  247 (255)
T ss_pred             -cc-CccchHHHHHHHHhCC-C---------------cCCCcCHHHHHHHHHHHcChhh-cCCCCCEEEECCCe
Confidence             00 0000011111111110 1               1235678999999999987632 23456888886654

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=97.01  E-value=0.0028  Score=49.75  Aligned_cols=113  Identities=10%  Similarity=-0.018  Sum_probs=70.3

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      .+..++|++||...+...           .....|+.+|.+.+.+++.++.+.  .++.+..++|+.+.++......   
T Consensus       137 ~~~~~iv~~ss~~~~~~~-----------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~---  202 (256)
T PRK06124        137 QGYGRIIAITSIAGQVAR-----------AGDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMA---  202 (256)
T ss_pred             cCCcEEEEEeechhccCC-----------CCccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhc---
Confidence            456789999986543211           124689999999999988876543  2799999999999986311100   


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCC
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTG  154 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~  154 (208)
                          .   ..-+.......   .+             ...+++.+|++++++.++..+. ....|+.+.+.++
T Consensus       203 ----~---~~~~~~~~~~~---~~-------------~~~~~~~~~~a~~~~~l~~~~~-~~~~G~~i~~dgg  251 (256)
T PRK06124        203 ----A---DPAVGPWLAQR---TP-------------LGRWGRPEEIAGAAVFLASPAA-SYVNGHVLAVDGG  251 (256)
T ss_pred             ----c---ChHHHHHHHhc---CC-------------CCCCCCHHHHHHHHHHHcCccc-CCcCCCEEEECCC
Confidence                0   01111111211   11             1236889999999999998732 2244566666544

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=96.98  E-value=0.002  Score=50.75  Aligned_cols=114  Identities=8%  Similarity=0.031  Sum_probs=71.4

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      .+..++|++||...+...           .....|+.+|.+.+.+++.++.+.  .++.+.+++||.+..+.....    
T Consensus       140 ~~~g~iv~isS~~~~~~~-----------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~----  204 (258)
T PRK06935        140 QGSGKIINIASMLSFQGG-----------KFVPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPI----  204 (258)
T ss_pred             cCCeEEEEECCHHhccCC-----------CCchhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhc----
Confidence            345689999998766321           124579999999999999987754  279999999999877521100    


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                          ... -........ .   ++             ..-+...+|+|.++..++... .....++++.+.++.
T Consensus       205 ----~~~-~~~~~~~~~-~---~~-------------~~~~~~~~dva~~~~~l~s~~-~~~~~G~~i~~dgg~  255 (258)
T PRK06935        205 ----RAD-KNRNDEILK-R---IP-------------AGRWGEPDDLMGAAVFLASRA-SDYVNGHILAVDGGW  255 (258)
T ss_pred             ----ccC-hHHHHHHHh-c---CC-------------CCCCCCHHHHHHHHHHHcChh-hcCCCCCEEEECCCe
Confidence                000 001111111 1   11             123577799999999988752 233566777776553

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.97  E-value=0.004  Score=48.33  Aligned_cols=90  Identities=13%  Similarity=0.100  Sum_probs=60.7

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      +.+.+++|++||...+...           .+...|+.+|.+.+.+++.+..+.  .++.++++||+.+.++..      
T Consensus       132 ~~~~~~iv~~ss~~~~~~~-----------~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~------  194 (239)
T PRK07666        132 ERQSGDIINISSTAGQKGA-----------AVTSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMA------  194 (239)
T ss_pred             hCCCcEEEEEcchhhccCC-----------CCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcch------
Confidence            3456789999986654321           234579999999998888776432  289999999999887520      


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhh
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHK  138 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  138 (208)
                                   ...  ..    .          ......++..+|+|+.++.++..
T Consensus       195 -------------~~~--~~----~----------~~~~~~~~~~~~~a~~~~~~l~~  223 (239)
T PRK07666        195 -------------VDL--GL----T----------DGNPDKVMQPEDLAEFIVAQLKL  223 (239)
T ss_pred             -------------hhc--cc----c----------ccCCCCCCCHHHHHHHHHHHHhC
Confidence                         000  00    0          00112357889999999999988

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.96  E-value=0.0052  Score=48.30  Aligned_cols=108  Identities=12%  Similarity=-0.048  Sum_probs=67.6

Q ss_pred             CCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCC
Q 028478            5 GCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDP   82 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~   82 (208)
                      +..++|++||...+.+.           .....|+.+|.+.|.+++.++.++  .++.++.++|+.+..+..       .
T Consensus       145 ~~~~iv~~ss~~~~~~~-----------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~-------~  206 (256)
T PRK12748        145 AGGRIINLTSGQSLGPM-----------PDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWI-------T  206 (256)
T ss_pred             CCeEEEEECCccccCCC-----------CCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCC-------C
Confidence            34589999997665421           224679999999999988876543  279999999987765410       0


Q ss_pred             CCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           83 RGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                              ..+.......   .          ..   .-+...+|+|+++..++... .....++.+++.++.
T Consensus       207 --------~~~~~~~~~~---~----------~~---~~~~~~~~~a~~~~~l~~~~-~~~~~g~~~~~d~g~  254 (256)
T PRK12748        207 --------EELKHHLVPK---F----------PQ---GRVGEPVDAARLIAFLVSEE-AKWITGQVIHSEGGF  254 (256)
T ss_pred             --------hhHHHhhhcc---C----------CC---CCCcCHHHHHHHHHHHhCcc-cccccCCEEEecCCc
Confidence                    0111111111   0          01   11345699999998887652 223456888886553

>PRK09242 tropinone reductase; Provisional

Probab=96.96  E-value=0.013  Score=46.02  Aligned_cols=113  Identities=14%  Similarity=0.087  Sum_probs=70.3

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      .+..++|++||...+...           .+...|+.+|.+.+.+++.++.+.  .++++..++|+.+.++......   
T Consensus       137 ~~~~~ii~~sS~~~~~~~-----------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~---  202 (257)
T PRK09242        137 HASSAIVNIGSVSGLTHV-----------RSGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPL---  202 (257)
T ss_pred             cCCceEEEECccccCCCC-----------CCCcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCccccccc---
Confidence            455689999997655421           234679999999999999876543  2799999999999886421100   


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCC
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTG  154 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~  154 (208)
                           . ............  ++.               -+...+|++.++..++... .....++.+.+.++
T Consensus       203 -----~-~~~~~~~~~~~~--~~~---------------~~~~~~~va~~~~~l~~~~-~~~~~g~~i~~~gg  251 (257)
T PRK09242        203 -----S-DPDYYEQVIERT--PMR---------------RVGEPEEVAAAVAFLCMPA-ASYITGQCIAVDGG  251 (257)
T ss_pred             -----C-ChHHHHHHHhcC--CCC---------------CCcCHHHHHHHHHHHhCcc-cccccCCEEEECCC
Confidence                 0 011222222211  211               1346789999999988652 22345677777544

>PRK06500 short chain dehydrogenase; Provisional

Probab=96.95  E-value=0.0088  Score=46.59  Aligned_cols=111  Identities=11%  Similarity=0.067  Sum_probs=65.3

Q ss_pred             EEEEecc-ccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            8 NLVFSSS-ATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         8 ~~i~~SS-~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      ++|++|| ...++.            ...+.|+.+|.+.|.+++.++.+.  .++++.++||+.++++....      .+
T Consensus       131 ~~i~~~S~~~~~~~------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~------~~  192 (249)
T PRK06500        131 SIVLNGSINAHIGM------------PNSSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGK------LG  192 (249)
T ss_pred             EEEEEechHhccCC------------CCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHh------hc
Confidence            5666666 444442            124689999999999998776542  27999999999999863210      00


Q ss_pred             CCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCC
Q 028478           85 IPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTG  154 (208)
Q Consensus        85 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~  154 (208)
                      ....... +........  ++.               -+...+|+|+++..++.... ....+..+.+.++
T Consensus       193 ~~~~~~~~~~~~~~~~~--~~~---------------~~~~~~~va~~~~~l~~~~~-~~~~g~~i~~~gg  245 (249)
T PRK06500        193 LPEATLDAVAAQIQALV--PLG---------------RFGTPEEIAKAVLYLASDES-AFIVGSEIIVDGG  245 (249)
T ss_pred             cCccchHHHHHHHHhcC--CCC---------------CCcCHHHHHHHHHHHcCccc-cCccCCeEEECCC
Confidence            0111112 222222221  111               14578999999999887532 1233455555443

>PRK06198 short chain dehydrogenase; Provisional

Probab=96.94  E-value=0.01  Score=46.59  Aligned_cols=116  Identities=10%  Similarity=0.019  Sum_probs=72.1

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      .++|++||...++...           ....|+.+|.+.|.+++.++.++  .++.++.++|+.+.++.....    ...
T Consensus       137 g~iv~~ss~~~~~~~~-----------~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~----~~~  201 (260)
T PRK06198        137 GTIVNIGSMSAHGGQP-----------FLAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRI----QRE  201 (260)
T ss_pred             CEEEEECCcccccCCC-----------CcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhh----hhh
Confidence            4799999987765321           24679999999999999876644  268999999999988631100    000


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                      ..+....++.......                 ....+++.+|+|+++..++... .....++.+.+.++.
T Consensus       202 ~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~a~~~~~l~~~~-~~~~~G~~~~~~~~~  254 (260)
T PRK06198        202 FHGAPDDWLEKAAATQ-----------------PFGRLLDPDEVARAVAFLLSDE-SGLMTGSVIDFDQSV  254 (260)
T ss_pred             ccCCChHHHHHHhccC-----------------CccCCcCHHHHHHHHHHHcChh-hCCccCceEeECCcc
Confidence            0001111222211111                 1223678999999999998763 223566888776554

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=96.93  E-value=0.0035  Score=48.86  Aligned_cols=111  Identities=10%  Similarity=-0.045  Sum_probs=69.6

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      +.+..++|++||......           ......|+.+|.+.+.+.+.+.++.  .++.+.+++|+.+.++...     
T Consensus       129 ~~~~~~iv~isS~~~~~~-----------~~~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~-----  192 (246)
T PRK12938        129 ERGWGRIINISSVNGQKG-----------QFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVK-----  192 (246)
T ss_pred             HcCCeEEEEEechhccCC-----------CCCChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhh-----
Confidence            446678999998643311           1235689999999988887776542  2799999999999876311     


Q ss_pred             CCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCC
Q 028478           81 DPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTG  154 (208)
Q Consensus        81 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~  154 (208)
                             .+.+ .+.......  +               ...+...+|+++++..++..+ .....++.+.+.++
T Consensus       193 -------~~~~~~~~~~~~~~--~---------------~~~~~~~~~v~~~~~~l~~~~-~~~~~g~~~~~~~g  242 (246)
T PRK12938        193 -------AIRPDVLEKIVATI--P---------------VRRLGSPDEIGSIVAWLASEE-SGFSTGADFSLNGG  242 (246)
T ss_pred             -------hcChHHHHHHHhcC--C---------------ccCCcCHHHHHHHHHHHcCcc-cCCccCcEEEECCc
Confidence                   0111 222222111  1               122456899999999888663 22356677777654

>PRK12744 short chain dehydrogenase; Provisional

Probab=96.92  E-value=0.0051  Score=48.38  Aligned_cols=98  Identities=8%  Similarity=-0.060  Sum_probs=61.2

Q ss_pred             CChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCeeEEEccccC
Q 028478           35 MNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYS  112 (208)
Q Consensus        35 ~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  112 (208)
                      ...|+.+|.+.|.+++.++.+.  .++++++++||.+.++...+.      .... ...........             
T Consensus       156 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~------~~~~-~~~~~~~~~~~-------------  215 (257)
T PRK12744        156 YSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQ------EGAE-AVAYHKTAAAL-------------  215 (257)
T ss_pred             cccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccc------cccc-hhhcccccccc-------------
Confidence            4679999999999999998764  268999999999977531110      0000 00000000000             


Q ss_pred             CCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478          113 TKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus       113 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                        .....+.+.+.+|+|.++..++..  .....++++++.++..
T Consensus       216 --~~~~~~~~~~~~dva~~~~~l~~~--~~~~~g~~~~~~gg~~  255 (257)
T PRK12744        216 --SPFSKTGLTDIEDIVPFIRFLVTD--GWWITGQTILINGGYT  255 (257)
T ss_pred             --cccccCCCCCHHHHHHHHHHhhcc--cceeecceEeecCCcc
Confidence              111122478999999999999985  1224568888887654

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=96.88  E-value=0.016  Score=45.47  Aligned_cols=113  Identities=10%  Similarity=0.066  Sum_probs=71.3

Q ss_pred             CCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCC
Q 028478            5 GCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDP   82 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~   82 (208)
                      +..++|++||.....           +..+...|+.+|.+.+.+++.++.+.  -++.+.++.|+.+-.+...       
T Consensus       137 ~~~~iv~isS~~~~~-----------~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~-------  198 (255)
T PRK06113        137 GGGVILTITSMAAEN-----------KNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALK-------  198 (255)
T ss_pred             CCcEEEEEecccccC-----------CCCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccc-------
Confidence            334899999865431           12235679999999999999887543  1688899999888765211       


Q ss_pred             CCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCc
Q 028478           83 RGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGT  157 (208)
Q Consensus        83 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~  157 (208)
                          ..+.+ +.....+..  +               ...+...+|+++++..++... .....|+.+++.++...
T Consensus       199 ----~~~~~~~~~~~~~~~--~---------------~~~~~~~~d~a~~~~~l~~~~-~~~~~G~~i~~~gg~~~  252 (255)
T PRK06113        199 ----SVITPEIEQKMLQHT--P---------------IRRLGQPQDIANAALFLCSPA-ASWVSGQILTVSGGGVQ  252 (255)
T ss_pred             ----cccCHHHHHHHHhcC--C---------------CCCCcCHHHHHHHHHHHcCcc-ccCccCCEEEECCCccc
Confidence                01111 222222111  1               112568899999999998652 22356788988877543

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.86  E-value=0.0038  Score=48.53  Aligned_cols=110  Identities=10%  Similarity=-0.096  Sum_probs=68.4

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      .+.+++|++||...+...           .....|+.+|.+.+.+++.+..+.  .++.++++||+.+-.+..+      
T Consensus       132 ~~~~~~v~~sS~~~~~~~-----------~~~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~------  194 (247)
T PRK05565        132 RKSGVIVNISSIWGLIGA-----------SCEVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWS------  194 (247)
T ss_pred             cCCcEEEEECCHhhccCC-----------CCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCcccc------
Confidence            355689999986554321           124579999998888877765542  3899999999988764211      


Q ss_pred             CCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCC
Q 028478           82 PRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTG  154 (208)
Q Consensus        82 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~  154 (208)
                        .    +.+ .........               .  ...+...+|+++.+..++... .....++.+++..+
T Consensus       195 --~----~~~~~~~~~~~~~---------------~--~~~~~~~~~va~~~~~l~~~~-~~~~~g~~~~~~~~  244 (247)
T PRK05565        195 --S----FSEEDKEGLAEEI---------------P--LGRLGKPEEIAKVVLFLASDD-ASYITGQIITVDGG  244 (247)
T ss_pred             --c----cChHHHHHHHhcC---------------C--CCCCCCHHHHHHHHHHHcCCc-cCCccCcEEEecCC
Confidence              0    000 111111100               0  123568899999999998773 22456688877654

>PRK07856 short chain dehydrogenase; Provisional

Probab=96.85  E-value=0.0071  Score=47.41  Aligned_cols=114  Identities=11%  Similarity=0.003  Sum_probs=71.5

Q ss_pred             CCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC-CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            6 CKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD-SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         6 vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      ..++|++||...+..           ......|+.+|.+.|.+++.++.++ +.+.+..++|+.+..+......+     
T Consensus       127 ~g~ii~isS~~~~~~-----------~~~~~~Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~-----  190 (252)
T PRK07856        127 GGSIVNIGSVSGRRP-----------SPGTAAYGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYG-----  190 (252)
T ss_pred             CcEEEEEcccccCCC-----------CCCCchhHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhcc-----
Confidence            358999999755421           1235689999999999999988765 34788999999887752110000     


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCc
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGT  157 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~  157 (208)
                         . ...........  +               ..-+...+|+|++++.++... .....|+.+.+.+|...
T Consensus       191 ---~-~~~~~~~~~~~--~---------------~~~~~~p~~va~~~~~L~~~~-~~~i~G~~i~vdgg~~~  241 (252)
T PRK07856        191 ---D-AEGIAAVAATV--P---------------LGRLATPADIAWACLFLASDL-ASYVSGANLEVHGGGER  241 (252)
T ss_pred             ---C-HHHHHHHhhcC--C---------------CCCCcCHHHHHHHHHHHcCcc-cCCccCCEEEECCCcch
Confidence               0 00111111111  1               112467899999999988653 22466788888766543

>PRK07825 short chain dehydrogenase; Provisional

Probab=96.85  E-value=0.0073  Score=47.94  Aligned_cols=88  Identities=13%  Similarity=0.034  Sum_probs=59.0

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      +.+..+||++||...+..           ......|+.+|.+.+.+.+.+..+.  .++.+++++|+.+-.+.       
T Consensus       126 ~~~~g~iv~isS~~~~~~-----------~~~~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~-------  187 (273)
T PRK07825        126 PRGRGHVVNVASLAGKIP-----------VPGMATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTEL-------  187 (273)
T ss_pred             hCCCCEEEEEcCccccCC-----------CCCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchh-------
Confidence            456678999999755431           1235679999998887766654432  28999999998776531       


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhh
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHK  138 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  138 (208)
                                  ..    +.    .          +.....++..+|+|++++.++.+
T Consensus       188 ------------~~----~~----~----------~~~~~~~~~~~~va~~~~~~l~~  215 (273)
T PRK07825        188 ------------IA----GT----G----------GAKGFKNVEPEDVAAAIVGTVAK  215 (273)
T ss_pred             ------------hc----cc----c----------cccCCCCCCHHHHHHHHHHHHhC
Confidence                        10    00    0          00112368899999999999987

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=96.81  E-value=0.0043  Score=48.22  Aligned_cols=111  Identities=9%  Similarity=0.016  Sum_probs=67.7

Q ss_pred             CCCCEEEEeccccc-cCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATV-YGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         4 ~~vk~~i~~SS~~v-yg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      .+..++|++||... ++..            ....|+.+|.+.+.+++.++.+.  .++.+++++|+.+..+...     
T Consensus       129 ~~~~~iv~~sS~~~~~~~~------------~~~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~-----  191 (245)
T PRK12936        129 RRYGRIINITSVVGVTGNP------------GQANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTG-----  191 (245)
T ss_pred             hCCCEEEEECCHHhCcCCC------------CCcchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhc-----
Confidence            35568999999644 4321            23569999998888887765542  2799999999977654210     


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                             .+.........+.   ++             ...+...+|+++++..++.... ....++.+++.++.
T Consensus       192 -------~~~~~~~~~~~~~---~~-------------~~~~~~~~~ia~~~~~l~~~~~-~~~~G~~~~~~~g~  242 (245)
T PRK12936        192 -------KLNDKQKEAIMGA---IP-------------MKRMGTGAEVASAVAYLASSEA-AYVTGQTIHVNGGM  242 (245)
T ss_pred             -------ccChHHHHHHhcC---CC-------------CCCCcCHHHHHHHHHHHcCccc-cCcCCCEEEECCCc
Confidence                   0011111111111   11             1225678999999988886532 22457889888664

>PRK06196 oxidoreductase; Provisional

Probab=96.80  E-value=0.0036  Score=51.03  Aligned_cols=70  Identities=10%  Similarity=-0.108  Sum_probs=47.3

Q ss_pred             CCCCEEEEeccccccC-CCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCC
Q 028478            4 HGCKNLVFSSSATVYG-WPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAH   73 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg-~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~   73 (208)
                      .+..++|++||..... ...........+..+...|+.+|.+.+.+.+.++.++  .++.+++++||.+.++.
T Consensus       146 ~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~  218 (315)
T PRK06196        146 GAGARVVALSSAGHRRSPIRWDDPHFTRGYDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPL  218 (315)
T ss_pred             cCCCeEEEECCHHhccCCCCccccCccCCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCc
Confidence            3446899999965432 1111111112334456789999999999988876543  27999999999999874

>PRK06172 short chain dehydrogenase; Provisional

Probab=96.79  E-value=0.0077  Score=47.16  Aligned_cols=115  Identities=10%  Similarity=-0.003  Sum_probs=71.7

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      .+..++|++||...+...           .....|+.+|.+.+.+.+.++.++  .++++.++.||.+-.+..+...   
T Consensus       134 ~~~~~ii~~sS~~~~~~~-----------~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~---  199 (253)
T PRK06172        134 QGGGAIVNTASVAGLGAA-----------PKMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAY---  199 (253)
T ss_pred             cCCcEEEEECchhhccCC-----------CCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhc---
Confidence            344589999997766431           235689999999999998887664  2699999999988665211000   


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                           .. .+.......... ++               .-+...+|+++.+.+++.... ....|+.+.+.++.
T Consensus       200 -----~~-~~~~~~~~~~~~-~~---------------~~~~~p~~ia~~~~~l~~~~~-~~~~G~~i~~dgg~  250 (253)
T PRK06172        200 -----EA-DPRKAEFAAAMH-PV---------------GRIGKVEEVASAVLYLCSDGA-SFTTGHALMVDGGA  250 (253)
T ss_pred             -----cc-ChHHHHHHhccC-CC---------------CCccCHHHHHHHHHHHhCccc-cCcCCcEEEECCCc
Confidence                 00 011111111110 11               124678999999999987632 23566777777654

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.78  E-value=0.027  Score=43.53  Aligned_cols=113  Identities=6%  Similarity=-0.022  Sum_probs=69.6

Q ss_pred             CCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCC
Q 028478            5 GCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDP   82 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~   82 (208)
                      +..++|++||...+...           .....|+.+|...+.+.+.++.++  .++++++++|+.+.++.....+    
T Consensus       118 ~~~~iv~~sS~~~~~~~-----------~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~----  182 (235)
T PRK06550        118 KSGIIINMCSIASFVAG-----------GGGAAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADF----  182 (235)
T ss_pred             CCcEEEEEcChhhccCC-----------CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCccccccc----
Confidence            33589999987554211           124579999999998888776654  2799999999999876311000    


Q ss_pred             CCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           83 RGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                         ..  -..........  +               ...+...+|+|++++.++.... ....+..+.+.+|.
T Consensus       183 ---~~--~~~~~~~~~~~--~---------------~~~~~~~~~~a~~~~~l~s~~~-~~~~g~~~~~~gg~  232 (235)
T PRK06550        183 ---EP--GGLADWVARET--P---------------IKRWAEPEEVAELTLFLASGKA-DYMQGTIVPIDGGW  232 (235)
T ss_pred             ---Cc--hHHHHHHhccC--C---------------cCCCCCHHHHHHHHHHHcChhh-ccCCCcEEEECCce
Confidence               00  00111221111  1               1235678999999999986632 23456777776553

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=96.77  E-value=0.005  Score=50.27  Aligned_cols=42  Identities=17%  Similarity=0.080  Sum_probs=33.9

Q ss_pred             CCCCCChHHHhHHHHHHHHHHHhhcC---CCccEEEEecccccCC
Q 028478           31 PLEAMNPYGRTKLFIEEICRDVHRSD---SEWKIILLRYFNPVGA   72 (208)
Q Consensus        31 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~iiR~~~i~G~   72 (208)
                      +..|.+.|+.||.+.+.+.+.+++++   .++.++.+|||.|++.
T Consensus       186 ~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t  230 (322)
T PRK07453        186 KFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADT  230 (322)
T ss_pred             CCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCC
Confidence            34567889999999888887776654   2799999999999874

>PRK07035 short chain dehydrogenase; Provisional

Probab=96.76  E-value=0.0043  Score=48.61  Aligned_cols=114  Identities=13%  Similarity=0.044  Sum_probs=70.1

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      +.+..+++++||...+..           ..+...|+.+|.+.+.+++.++.++  .++++..+.||.+-.+.....+  
T Consensus       134 ~~~~~~iv~~sS~~~~~~-----------~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~--  200 (252)
T PRK07035        134 EQGGGSIVNVASVNGVSP-----------GDFQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALF--  200 (252)
T ss_pred             hCCCcEEEEECchhhcCC-----------CCCCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCccccccc--
Confidence            345568999998643321           1235689999999999999987654  2799999999888664211100  


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCC
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTG  154 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~  154 (208)
                           ..  ......... .   .+             ...+...+|+|+++..++.... ....++++.+.++
T Consensus       201 -----~~--~~~~~~~~~-~---~~-------------~~~~~~~~~va~~~~~l~~~~~-~~~~g~~~~~dgg  249 (252)
T PRK07035        201 -----KN--DAILKQALA-H---IP-------------LRRHAEPSEMAGAVLYLASDAS-SYTTGECLNVDGG  249 (252)
T ss_pred             -----CC--HHHHHHHHc-c---CC-------------CCCcCCHHHHHHHHHHHhCccc-cCccCCEEEeCCC
Confidence                 00  011212211 1   11             1125678999999999887632 2345677777544

>PRK05717 oxidoreductase; Validated

Probab=96.76  E-value=0.021  Score=44.83  Aligned_cols=110  Identities=13%  Similarity=0.005  Sum_probs=68.4

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC-CCccEEEEecccccCCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD-SEWKIILLRYFNPVGAHPSGKIGEDPRGI   85 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~iiR~~~i~G~~~~~~~~~~~~~~   85 (208)
                      .++|++||...+...           ...+.|+.+|.+.+.+++.+..++ +++.+.+++|+.+.++....       . 
T Consensus       137 g~ii~~sS~~~~~~~-----------~~~~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~-------~-  197 (255)
T PRK05717        137 GAIVNLASTRARQSE-----------PDTEAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQ-------R-  197 (255)
T ss_pred             cEEEEEcchhhcCCC-----------CCCcchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCcccc-------c-
Confidence            478999886554211           124579999999999999988775 35899999999999863110       0 


Q ss_pred             CCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           86 PNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                        ...... .......              .  ...+.+.+|+|.++..++... .....++.+.+.++.
T Consensus       198 --~~~~~~-~~~~~~~--------------~--~~~~~~~~~va~~~~~l~~~~-~~~~~g~~~~~~gg~  247 (255)
T PRK05717        198 --RAEPLS-EADHAQH--------------P--AGRVGTVEDVAAMVAWLLSRQ-AGFVTGQEFVVDGGM  247 (255)
T ss_pred             --cchHHH-HHHhhcC--------------C--CCCCcCHHHHHHHHHHHcCch-hcCccCcEEEECCCc
Confidence              001111 1111110              0  112578899999999888652 122446777775543

>PRK07454 short chain dehydrogenase; Provisional

Probab=96.74  E-value=0.0062  Score=47.34  Aligned_cols=58  Identities=9%  Similarity=0.016  Sum_probs=44.2

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGA   72 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~   72 (208)
                      .+..++|++||...++..           .+...|+.+|.+.+.+.+.++.+.  .+++++++||+.+-.+
T Consensus       132 ~~~~~iv~isS~~~~~~~-----------~~~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~  191 (241)
T PRK07454        132 RGGGLIINVSSIAARNAF-----------PQWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTP  191 (241)
T ss_pred             cCCcEEEEEccHHhCcCC-----------CCccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCC
Confidence            345689999998776421           235689999999999988765432  2899999999998775

>PRK07109 short chain dehydrogenase; Provisional

Probab=96.70  E-value=0.017  Score=47.54  Aligned_cols=93  Identities=15%  Similarity=0.063  Sum_probs=60.9

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC----CCccEEEEecccccCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD----SEWKIILLRYFNPVGAHPSGKIG   79 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~iiR~~~i~G~~~~~~~~   79 (208)
                      .+..+||++||...+...           .....|+.+|.+.+.+.+.+..+.    +++.+++++|+.+-.+.      
T Consensus       134 ~~~g~iV~isS~~~~~~~-----------~~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~------  196 (334)
T PRK07109        134 RDRGAIIQVGSALAYRSI-----------PLQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQ------  196 (334)
T ss_pred             cCCcEEEEeCChhhccCC-----------CcchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCch------
Confidence            345689999998777421           124689999999988887765432    26899999999887651      


Q ss_pred             CCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhh
Q 028478           80 EDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHK  138 (208)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  138 (208)
                                   ...... .   +..        .......+...+|+|++++.++.+
T Consensus       197 -------------~~~~~~-~---~~~--------~~~~~~~~~~pe~vA~~i~~~~~~  230 (334)
T PRK07109        197 -------------FDWARS-R---LPV--------EPQPVPPIYQPEVVADAILYAAEH  230 (334)
T ss_pred             -------------hhhhhh-h---ccc--------cccCCCCCCCHHHHHHHHHHHHhC
Confidence                         111100 0   000        001112356889999999999988

>PRK08589 short chain dehydrogenase; Validated

Probab=96.70  E-value=0.016  Score=46.08  Aligned_cols=117  Identities=8%  Similarity=-0.101  Sum_probs=69.8

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      .++|++||...+...           .....|+.+|.+.+.+++.++.++  .++.+..+.||.|..+......+...  
T Consensus       134 g~iv~isS~~~~~~~-----------~~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~--  200 (272)
T PRK08589        134 GSIINTSSFSGQAAD-----------LYRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSE--  200 (272)
T ss_pred             CEEEEeCchhhcCCC-----------CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccch--
Confidence            489999997655321           124579999999999999987654  27999999999987753211100000  


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                        ..+...+.......   .           +  ..-+...+|+|++++.++... .....++.+.+.++.
T Consensus       201 --~~~~~~~~~~~~~~---~-----------~--~~~~~~~~~va~~~~~l~s~~-~~~~~G~~i~vdgg~  252 (272)
T PRK08589        201 --DEAGKTFRENQKWM---T-----------P--LGRLGKPEEVAKLVVFLASDD-SSFITGETIRIDGGV  252 (272)
T ss_pred             --hhHHHHHhhhhhcc---C-----------C--CCCCcCHHHHHHHHHHHcCch-hcCcCCCEEEECCCc
Confidence              00000011111100   0           0  112567899999999988753 223566777776554

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=96.70  E-value=0.006  Score=47.87  Aligned_cols=114  Identities=9%  Similarity=-0.011  Sum_probs=69.9

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      .+..+||++||.....           +..+...|+.+|.+.+.+++.++.+.  .++.+..++||.+..+......   
T Consensus       135 ~~~~~iv~isS~~~~~-----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~---  200 (254)
T PRK08085        135 RQAGKIINICSMQSEL-----------GRDTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALV---  200 (254)
T ss_pred             cCCcEEEEEccchhcc-----------CCCCCcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhc---
Confidence            3456899999864321           11235689999999999999987653  2799999999999886321100   


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                           .  .+.+........ ++               .-+...+|+|.++..++... .....++...+.+|.
T Consensus       201 -----~--~~~~~~~~~~~~-p~---------------~~~~~~~~va~~~~~l~~~~-~~~i~G~~i~~dgg~  250 (254)
T PRK08085        201 -----E--DEAFTAWLCKRT-PA---------------ARWGDPQELIGAAVFLSSKA-SDFVNGHLLFVDGGM  250 (254)
T ss_pred             -----c--CHHHHHHHHhcC-CC---------------CCCcCHHHHHHHHHHHhCcc-ccCCcCCEEEECCCe
Confidence                 0  011111111110 11               23567899999999888752 223455666665443

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=96.64  E-value=0.029  Score=44.31  Aligned_cols=119  Identities=11%  Similarity=0.070  Sum_probs=71.2

Q ss_pred             CCCCEEEEecccc-ccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSAT-VYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         4 ~~vk~~i~~SS~~-vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      .+..+||++||.. .++.            .+...|+.+|.+.+.+++.+++++  .++.+..++||.+..+........
T Consensus       136 ~~~g~iv~isS~~~~~~~------------~~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~  203 (265)
T PRK07097        136 KGHGKIINICSMMSELGR------------ETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLREL  203 (265)
T ss_pred             cCCcEEEEEcCccccCCC------------CCCccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhc
Confidence            3556899999853 3321            235689999999999999987764  379999999999988632110000


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                      ...+   ...++........  +               ...+...+|+|.++..++... .....++.+.+.++.
T Consensus       204 ~~~~---~~~~~~~~~~~~~--~---------------~~~~~~~~dva~~~~~l~~~~-~~~~~g~~~~~~gg~  257 (265)
T PRK07097        204 QADG---SRHPFDQFIIAKT--P---------------AARWGDPEDLAGPAVFLASDA-SNFVNGHILYVDGGI  257 (265)
T ss_pred             cccc---cchhHHHHHHhcC--C---------------ccCCcCHHHHHHHHHHHhCcc-cCCCCCCEEEECCCc
Confidence            0000   0001111111111  1               112567899999999998863 223456777776554

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=96.62  E-value=0.021  Score=44.15  Aligned_cols=112  Identities=7%  Similarity=-0.047  Sum_probs=69.5

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      +.+.+++|++||......           ......|+.+|.+.+.+++.++.+.  .++.+..++|+.+.++...     
T Consensus       126 ~~~~~~iv~iss~~~~~~-----------~~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~-----  189 (242)
T TIGR01829       126 ERGWGRIINISSVNGQKG-----------QFGQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVM-----  189 (242)
T ss_pred             hcCCcEEEEEcchhhcCC-----------CCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCcccc-----
Confidence            456678999998543311           1134579999998888887775543  3899999999999886311     


Q ss_pred             CCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           81 DPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        81 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                         .    +.+ .+.......  ++               ..+...+|+++++..++..+. ....|+.+.+.++.
T Consensus       190 ---~----~~~~~~~~~~~~~--~~---------------~~~~~~~~~a~~~~~l~~~~~-~~~~G~~~~~~gg~  240 (242)
T TIGR01829       190 ---A----MREDVLNSIVAQI--PV---------------GRLGRPEEIAAAVAFLASEEA-GYITGATLSINGGL  240 (242)
T ss_pred             ---c----cchHHHHHHHhcC--CC---------------CCCcCHHHHHHHHHHHcCchh-cCccCCEEEecCCc
Confidence               0    111 222222111  11               113456899999888776632 23567888887664

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK08643 acetoin reductase; Validated

Probab=96.61  E-value=0.034  Score=43.56  Aligned_cols=120  Identities=8%  Similarity=-0.072  Sum_probs=67.7

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      .++|++||...+...           .....|+.+|.+.+.+++.++.+.  .++.++.++|+.+.++............
T Consensus       132 ~~iv~~sS~~~~~~~-----------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~  200 (256)
T PRK08643        132 GKIINATSQAGVVGN-----------PELAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGEN  200 (256)
T ss_pred             CEEEEECccccccCC-----------CCCchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccc
Confidence            378898886543211           124679999999999888877643  2789999999999876311000000000


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                       ...-..+........   ++             ..-+...+|+|+++..++... .....|+.+.+.++.
T Consensus       201 -~~~~~~~~~~~~~~~---~~-------------~~~~~~~~~va~~~~~L~~~~-~~~~~G~~i~vdgg~  253 (256)
T PRK08643        201 -AGKPDEWGMEQFAKD---IT-------------LGRLSEPEDVANCVSFLAGPD-SDYITGQTIIVDGGM  253 (256)
T ss_pred             -cCCCchHHHHHHhcc---CC-------------CCCCcCHHHHHHHHHHHhCcc-ccCccCcEEEeCCCe
Confidence             000000000111111   00             112567899999999988652 234566777776554

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.60  E-value=0.019  Score=44.42  Aligned_cols=102  Identities=15%  Similarity=0.043  Sum_probs=63.8

Q ss_pred             CEEEEeccccc-cCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATV-YGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPR   83 (208)
Q Consensus         7 k~~i~~SS~~v-yg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~   83 (208)
                      .++|++||... ++           +..+...|+.+|.+.+.+++.+..+.  ++++++++||+.++++...       .
T Consensus       129 ~~iv~~ss~~~~~~-----------~~~~~~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~-------~  190 (238)
T PRK05786        129 SSIVLVSSMSGIYK-----------ASPDQLSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEP-------E  190 (238)
T ss_pred             CEEEEEecchhccc-----------CCCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCc-------h
Confidence            36888888643 22           11235679999999998888876543  3899999999999986210       0


Q ss_pred             CCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecC
Q 028478           84 GIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGT  153 (208)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~  153 (208)
                      .       .....   .  +           .+   ..++..+|+++++..++..+. ....++.+.+.+
T Consensus       191 ~-------~~~~~---~--~-----------~~---~~~~~~~~va~~~~~~~~~~~-~~~~g~~~~~~~  233 (238)
T PRK05786        191 R-------NWKKL---R--K-----------LG---DDMAPPEDFAKVIIWLLTDEA-DWVDGVVIPVDG  233 (238)
T ss_pred             h-------hhhhh---c--c-----------cc---CCCCCHHHHHHHHHHHhcccc-cCccCCEEEECC
Confidence            0       00000   0  0           01   124677999999999997632 123456666643

>PRK08251 short chain dehydrogenase; Provisional

Probab=96.59  E-value=0.018  Score=44.93  Aligned_cols=59  Identities=17%  Similarity=0.184  Sum_probs=43.9

Q ss_pred             cCCCCEEEEecccccc-CCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCC
Q 028478            3 AHGCKNLVFSSSATVY-GWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGA   72 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vy-g~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~   72 (208)
                      +.+..++|++||.... +..           .+...|+.+|.+.+.+.+.+..++  .++.+++++|+.+.++
T Consensus       129 ~~~~~~iv~~sS~~~~~~~~-----------~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~  190 (248)
T PRK08251        129 EQGSGHLVLISSVSAVRGLP-----------GVKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSE  190 (248)
T ss_pred             hcCCCeEEEEeccccccCCC-----------CCcccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcch
Confidence            4466789999986543 311           134689999999999988877653  2789999999998875

>PRK08703 short chain dehydrogenase; Provisional

Probab=96.56  E-value=0.02  Score=44.46  Aligned_cols=57  Identities=11%  Similarity=0.082  Sum_probs=42.7

Q ss_pred             CCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC---CCccEEEEecccccCC
Q 028478            5 GCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD---SEWKIILLRYFNPVGA   72 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~iiR~~~i~G~   72 (208)
                      +..++|++||.....           +......|+.+|.+.+.+++.++.+.   +++.+.+++||.+.++
T Consensus       138 ~~~~iv~~ss~~~~~-----------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~  197 (239)
T PRK08703        138 PDASVIFVGESHGET-----------PKAYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSP  197 (239)
T ss_pred             CCCEEEEEecccccc-----------CCCCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCc
Confidence            445888888853321           12234579999999999998887764   2589999999999987

>PRK06949 short chain dehydrogenase; Provisional

Probab=96.54  E-value=0.041  Score=43.08  Aligned_cols=56  Identities=9%  Similarity=-0.073  Sum_probs=43.5

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAH   73 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~   73 (208)
                      .++|++||...+..           ..+...|+.+|.+.+.+++.++.+.  .++++++++||.++++.
T Consensus       146 g~iv~~sS~~~~~~-----------~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~  203 (258)
T PRK06949        146 GRIINIASVAGLRV-----------LPQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEI  203 (258)
T ss_pred             eEEEEECcccccCC-----------CCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCc
Confidence            48999998765532           1235689999999999998876653  27999999999999873

>PRK12742 oxidoreductase; Provisional

Probab=96.54  E-value=0.053  Score=41.88  Aligned_cols=108  Identities=9%  Similarity=0.043  Sum_probs=67.1

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      .++|++||....          ..+..+...|+.+|.+.|.+++.++.++  .++.+.+++||.+..+...       ..
T Consensus       125 g~iv~isS~~~~----------~~~~~~~~~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~-------~~  187 (237)
T PRK12742        125 GRIIIIGSVNGD----------RMPVAGMAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANP-------AN  187 (237)
T ss_pred             CeEEEEeccccc----------cCCCCCCcchHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccc-------cc
Confidence            489999985431          1123346789999999999998876653  2799999999988765211       00


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCC
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTG  154 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~  154 (208)
                           .+.. ......   .+             ..-+...+|+++++..++... .....|..+.+.++
T Consensus       188 -----~~~~-~~~~~~---~~-------------~~~~~~p~~~a~~~~~l~s~~-~~~~~G~~~~~dgg  234 (237)
T PRK12742        188 -----GPMK-DMMHSF---MA-------------IKRHGRPEEVAGMVAWLAGPE-ASFVTGAMHTIDGA  234 (237)
T ss_pred             -----cHHH-HHHHhc---CC-------------CCCCCCHHHHHHHHHHHcCcc-cCcccCCEEEeCCC
Confidence                 0111 111111   11             112467899999999988763 22345567666544

>PRK12743 oxidoreductase; Provisional

Probab=96.52  E-value=0.054  Score=42.55  Aligned_cols=109  Identities=9%  Similarity=-0.022  Sum_probs=68.2

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      .++|++||....           .+..+...|+.+|.+.+.+++.++.++  .++.++.++||.+.++...    ..   
T Consensus       133 g~ii~isS~~~~-----------~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~----~~---  194 (256)
T PRK12743        133 GRIINITSVHEH-----------TPLPGASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNG----MD---  194 (256)
T ss_pred             eEEEEEeecccc-----------CCCCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCcccc----cc---
Confidence            489999985322           223346789999999999988877643  1799999999999986311    00   


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                       ..   ........+    +++         +    .+...+|+|+++..++... .....|..+.+.++.
T Consensus       195 -~~---~~~~~~~~~----~~~---------~----~~~~~~dva~~~~~l~~~~-~~~~~G~~~~~dgg~  243 (256)
T PRK12743        195 -DS---DVKPDSRPG----IPL---------G----RPGDTHEIASLVAWLCSEG-ASYTTGQSLIVDGGF  243 (256)
T ss_pred             -Ch---HHHHHHHhc----CCC---------C----CCCCHHHHHHHHHHHhCcc-ccCcCCcEEEECCCc
Confidence             00   011111111    111         1    1457899999999888652 223456777776654

>PRK06924 short chain dehydrogenase; Provisional

Probab=96.46  E-value=0.038  Score=43.11  Aligned_cols=56  Identities=16%  Similarity=0.063  Sum_probs=41.9

Q ss_pred             CCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC----CCccEEEEecccccCC
Q 028478            6 CKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD----SEWKIILLRYFNPVGA   72 (208)
Q Consensus         6 vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~iiR~~~i~G~   72 (208)
                      .+++|++||...+.           +..+...|+.+|.+.+.+++.++.+.    .++.+..++||.+-.+
T Consensus       133 ~~~iv~~sS~~~~~-----------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~  192 (251)
T PRK06924        133 DKRVINISSGAAKN-----------PYFGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTN  192 (251)
T ss_pred             CceEEEecchhhcC-----------CCCCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccH
Confidence            45899999965542           22346789999999999999886542    2688999999877654

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=96.46  E-value=0.031  Score=43.51  Aligned_cols=107  Identities=12%  Similarity=0.062  Sum_probs=64.6

Q ss_pred             EEEEeccccc-cCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            8 NLVFSSSATV-YGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         8 ~~i~~SS~~v-yg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      ++|++||... ++...           ....|+.+|.+.+.+++.++.+.  .++.++++||+.+..+...      ...
T Consensus       137 ~ii~~sS~~~~~~~~~-----------~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~------~~~  199 (248)
T PRK06947        137 AIVNVSSIASRLGSPN-----------EYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHA------SGG  199 (248)
T ss_pred             EEEEECchhhcCCCCC-----------CCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCccccccc------ccC
Confidence            6899998644 33211           12469999999999988877653  2799999999999886311      000


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecC
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGT  153 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~  153 (208)
                      .    ....... .... ++               .-+...+|+|++++.++..+.. ...|+.+.+.+
T Consensus       200 ~----~~~~~~~-~~~~-~~---------------~~~~~~e~va~~~~~l~~~~~~-~~~G~~~~~~g  246 (248)
T PRK06947        200 Q----PGRAARL-GAQT-PL---------------GRAGEADEVAETIVWLLSDAAS-YVTGALLDVGG  246 (248)
T ss_pred             C----HHHHHHH-hhcC-CC---------------CCCcCHHHHHHHHHHHcCcccc-CcCCceEeeCC
Confidence            0    0111111 1110 11               1135789999999999887422 24556665543

>PRK07024 short chain dehydrogenase; Provisional

Probab=96.44  E-value=0.0097  Score=46.82  Aligned_cols=58  Identities=12%  Similarity=-0.033  Sum_probs=43.5

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhh---cCCCccEEEEecccccCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHR---SDSEWKIILLRYFNPVGA   72 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~~~~~~iiR~~~i~G~   72 (208)
                      +.+..++|++||...+-.           ......|+.+|.+.+.+++.++.   .+ +++++++||+.+.++
T Consensus       127 ~~~~~~iv~isS~~~~~~-----------~~~~~~Y~asK~a~~~~~~~l~~e~~~~-gi~v~~v~Pg~v~t~  187 (257)
T PRK07024        127 AARRGTLVGIASVAGVRG-----------LPGAGAYSASKAAAIKYLESLRVELRPA-GVRVVTIAPGYIRTP  187 (257)
T ss_pred             hcCCCEEEEEechhhcCC-----------CCCCcchHHHHHHHHHHHHHHHHHhhcc-CcEEEEEecCCCcCc
Confidence            445668999988654421           11245799999999999988753   34 899999999999885

>PRK07478 short chain dehydrogenase; Provisional

Probab=96.43  E-value=0.01  Score=46.53  Aligned_cols=114  Identities=11%  Similarity=0.061  Sum_probs=69.8

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      .+..++|++||...+..          +......|+.+|.+.+.+.+.++.+.  .++.+.+++||.+-.+....     
T Consensus       133 ~~~~~iv~~sS~~~~~~----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-----  197 (254)
T PRK07478        133 RGGGSLIFTSTFVGHTA----------GFPGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRA-----  197 (254)
T ss_pred             cCCceEEEEechHhhcc----------CCCCcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCccccc-----
Confidence            44568999999765521          11235689999999999999887764  26899999999987652110     


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCC
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTG  154 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~  154 (208)
                      ..   .  .+.......... +               ...+...+|+|++++.++... .....|+++.+.++
T Consensus       198 ~~---~--~~~~~~~~~~~~-~---------------~~~~~~~~~va~~~~~l~s~~-~~~~~G~~~~~dgg  248 (254)
T PRK07478        198 MG---D--TPEALAFVAGLH-A---------------LKRMAQPEEIAQAALFLASDA-ASFVTGTALLVDGG  248 (254)
T ss_pred             cc---C--CHHHHHHHHhcC-C---------------CCCCcCHHHHHHHHHHHcCch-hcCCCCCeEEeCCc
Confidence            00   0  011111111110 1               112467899999999988763 22345677766554

>PRK06114 short chain dehydrogenase; Provisional

Probab=96.35  E-value=0.063  Score=42.10  Aligned_cols=114  Identities=8%  Similarity=-0.023  Sum_probs=69.3

Q ss_pred             CCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCC
Q 028478            5 GCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDP   82 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~   82 (208)
                      +..++|++||..-+.....         .+...|+.+|.+.+.+.+.++.+.  .++++.+++||.+.++...     ..
T Consensus       136 ~~~~iv~isS~~~~~~~~~---------~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~-----~~  201 (254)
T PRK06114        136 GGGSIVNIASMSGIIVNRG---------LLQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNT-----RP  201 (254)
T ss_pred             CCcEEEEECchhhcCCCCC---------CCcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccc-----cc
Confidence            4458999998654321111         124579999999999988887642  2799999999999876311     00


Q ss_pred             CCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           83 RGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                           ......... .... ++               .-+...+|+|.+++.++... .....|+++.+.+|.
T Consensus       202 -----~~~~~~~~~-~~~~-p~---------------~r~~~~~dva~~~~~l~s~~-~~~~tG~~i~~dgg~  251 (254)
T PRK06114        202 -----EMVHQTKLF-EEQT-PM---------------QRMAKVDEMVGPAVFLLSDA-ASFCTGVDLLVDGGF  251 (254)
T ss_pred             -----cchHHHHHH-HhcC-CC---------------CCCcCHHHHHHHHHHHcCcc-ccCcCCceEEECcCE
Confidence                 011111111 1110 11               12467899999999988652 234566777776553

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=96.31  E-value=0.05  Score=42.87  Aligned_cols=113  Identities=12%  Similarity=0.003  Sum_probs=67.6

Q ss_pred             CCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCC
Q 028478            5 GCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDP   82 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~   82 (208)
                      +..+||++||....-           +......|+.+|.+.+.+++.++.++  .++.+..+.||.+-.+...       
T Consensus       143 ~~g~iv~isS~~~~~-----------~~~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~-------  204 (260)
T PRK08416        143 GGGSIISLSSTGNLV-----------YIENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALK-------  204 (260)
T ss_pred             CCEEEEEEecccccc-----------CCCCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhh-------
Confidence            445899999864321           11124579999999999999988764  2799999999877654210       


Q ss_pred             CCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           83 RGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                       ...+ . .-......... ++               .-+...+|+|.+++.++.... ....++.+.+.++.
T Consensus       205 -~~~~-~-~~~~~~~~~~~-~~---------------~r~~~p~~va~~~~~l~~~~~-~~~~G~~i~vdgg~  257 (260)
T PRK08416        205 -AFTN-Y-EEVKAKTEELS-PL---------------NRMGQPEDLAGACLFLCSEKA-SWLTGQTIVVDGGT  257 (260)
T ss_pred             -hccC-C-HHHHHHHHhcC-CC---------------CCCCCHHHHHHHHHHHcChhh-hcccCcEEEEcCCe
Confidence             0000 0 01111111110 11               125678999999999987532 23456777675543

>PRK08265 short chain dehydrogenase; Provisional

Probab=96.29  E-value=0.028  Score=44.35  Aligned_cols=113  Identities=10%  Similarity=-0.101  Sum_probs=67.0

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      .++|++||....-..           .....|+.+|...+.+.+.++.+.  .++.+.+++||.+..+......    . 
T Consensus       130 g~ii~isS~~~~~~~-----------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~----~-  193 (261)
T PRK08265        130 GAIVNFTSISAKFAQ-----------TGRWLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELS----G-  193 (261)
T ss_pred             cEEEEECchhhccCC-----------CCCchhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhc----c-
Confidence            478999986543211           124579999999999998877653  2799999999988765211000    0 


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                        .. ...........   .           +  ..-+...+|+|+++..++... .....++.+.+.++.
T Consensus       194 --~~-~~~~~~~~~~~---~-----------p--~~r~~~p~dva~~~~~l~s~~-~~~~tG~~i~vdgg~  244 (261)
T PRK08265        194 --GD-RAKADRVAAPF---H-----------L--LGRVGDPEEVAQVVAFLCSDA-ASFVTGADYAVDGGY  244 (261)
T ss_pred             --cc-hhHHHHhhccc---C-----------C--CCCccCHHHHHHHHHHHcCcc-ccCccCcEEEECCCe
Confidence              00 00111111100   0           0  112467899999999998753 223556777776553

>PRK07814 short chain dehydrogenase; Provisional

Probab=96.28  E-value=0.022  Score=44.94  Aligned_cols=112  Identities=11%  Similarity=0.006  Sum_probs=67.7

Q ss_pred             CCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC-CCccEEEEecccccCCCCCCCCCCCCC
Q 028478            5 GCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD-SEWKIILLRYFNPVGAHPSGKIGEDPR   83 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~iiR~~~i~G~~~~~~~~~~~~   83 (208)
                      +..++|++||..-..           +..+.+.|+.+|.+.+.+++.+..+. +++.+..++|+.+..+....      .
T Consensus       138 ~~g~iv~~sS~~~~~-----------~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~------~  200 (263)
T PRK07814        138 GGGSVINISSTMGRL-----------AGRGFAAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEV------V  200 (263)
T ss_pred             CCeEEEEEccccccC-----------CCCCCchhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhh------c
Confidence            445899999853321           12345689999999999999887764 46788899998887642100      0


Q ss_pred             CCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCC
Q 028478           84 GIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTG  154 (208)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~  154 (208)
                      . .+   .-+.....+..   +             ...+...+|+|++++.++... .....++.+.+.++
T Consensus       201 ~-~~---~~~~~~~~~~~---~-------------~~~~~~~~~va~~~~~l~~~~-~~~~~g~~~~~~~~  250 (263)
T PRK07814        201 A-AN---DELRAPMEKAT---P-------------LRRLGDPEDIAAAAVYLASPA-GSYLTGKTLEVDGG  250 (263)
T ss_pred             c-CC---HHHHHHHHhcC---C-------------CCCCcCHHHHHHHHHHHcCcc-ccCcCCCEEEECCC
Confidence            0 00   01111112210   0             112467899999999998652 22345577777544

>PRK06057 short chain dehydrogenase; Provisional

Probab=96.27  E-value=0.04  Score=43.22  Aligned_cols=113  Identities=11%  Similarity=0.018  Sum_probs=65.4

Q ss_pred             CCCEEEEeccc-cccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCC
Q 028478            5 GCKNLVFSSSA-TVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         5 ~vk~~i~~SS~-~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      +..++|++||. .++|..           .+...|+.+|++.+.+.+.++.++  .++.+++++||.+.++.....+   
T Consensus       131 ~~g~iv~~sS~~~~~g~~-----------~~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~---  196 (255)
T PRK06057        131 GKGSIINTASFVAVMGSA-----------TSQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELF---  196 (255)
T ss_pred             CCcEEEEEcchhhccCCC-----------CCCcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhc---
Confidence            34578888885 455421           124579999987777776554322  1799999999999886321100   


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCC
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTG  154 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~  154 (208)
                          ... .....+...    .++         .    ..+..++|+++++..++.... ....++.+.+.++
T Consensus       197 ----~~~-~~~~~~~~~----~~~---------~----~~~~~~~~~a~~~~~l~~~~~-~~~~g~~~~~~~g  246 (255)
T PRK06057        197 ----AKD-PERAARRLV----HVP---------M----GRFAEPEEIAAAVAFLASDDA-SFITASTFLVDGG  246 (255)
T ss_pred             ----cCC-HHHHHHHHh----cCC---------C----CCCcCHHHHHHHHHHHhCccc-cCccCcEEEECCC
Confidence                000 011111111    111         1    146889999999988876532 2344567766544

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=96.27  E-value=0.048  Score=49.33  Aligned_cols=120  Identities=13%  Similarity=0.044  Sum_probs=69.0

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEeccccc-CCCCCCCCCCCC-
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPV-GAHPSGKIGEDP-   82 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~-G~~~~~~~~~~~-   82 (208)
                      .++|++||...+...           .....|+.+|.+.+.+++.++.+.  .++.+..++|+.|+ |...... .... 
T Consensus       546 g~IV~iSS~~a~~~~-----------~~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~-~~~~~  613 (676)
T TIGR02632       546 GNIVFIASKNAVYAG-----------KNASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDG-EWREE  613 (676)
T ss_pred             CEEEEEeChhhcCCC-----------CCCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccc-cchhh
Confidence            379999986443211           124689999999999999887653  27899999999887 3210000 0000 


Q ss_pred             CCCCCCh-HHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           83 RGIPNNL-MPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        83 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                      ......+ ...+......                ....+.+++.+|+|+++..++.... ....|.++++.+|.
T Consensus       614 ~~~~~~~~~~~~~~~~~~----------------r~~l~r~v~peDVA~av~~L~s~~~-~~~TG~~i~vDGG~  670 (676)
T TIGR02632       614 RAAAYGIPADELEEHYAK----------------RTLLKRHIFPADIAEAVFFLASSKS-EKTTGCIITVDGGV  670 (676)
T ss_pred             hhhcccCChHHHHHHHHh----------------cCCcCCCcCHHHHHHHHHHHhCCcc-cCCcCcEEEECCCc
Confidence            0000000 0000111111                1112346889999999999886522 23456888887765

>PRK06484 short chain dehydrogenase; Validated

Probab=96.21  E-value=0.02  Score=49.93  Aligned_cols=112  Identities=9%  Similarity=-0.069  Sum_probs=70.1

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      .++|++||...+..           ..+...|+.+|...+.+.+.++.++  .++.+..+.||.+..+......     .
T Consensus       394 g~iv~isS~~~~~~-----------~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~-----~  457 (520)
T PRK06484        394 GVIVNLGSIASLLA-----------LPPRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALK-----A  457 (520)
T ss_pred             CEEEEECchhhcCC-----------CCCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhc-----c
Confidence            47999999765431           1235689999999999999887653  2799999999999876311000     0


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                        .. ........+..  ++               .-+...+|+|++++.++... .....++.+.+.++.
T Consensus       458 --~~-~~~~~~~~~~~--~~---------------~~~~~~~dia~~~~~l~s~~-~~~~~G~~i~vdgg~  507 (520)
T PRK06484        458 --SG-RADFDSIRRRI--PL---------------GRLGDPEEVAEAIAFLASPA-ASYVNGATLTVDGGW  507 (520)
T ss_pred             --cc-HHHHHHHHhcC--CC---------------CCCcCHHHHHHHHHHHhCcc-ccCccCcEEEECCCc
Confidence              00 00111111111  11               12467899999999988752 223566888776654

>PRK08226 short chain dehydrogenase; Provisional

Probab=96.21  E-value=0.051  Score=42.73  Aligned_cols=119  Identities=13%  Similarity=0.020  Sum_probs=69.1

Q ss_pred             CCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCC
Q 028478            5 GCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDP   82 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~   82 (208)
                      +..++|++||.....          .+......|+.+|.+.|.+++.++.++  .+++++.++||.+.++......... 
T Consensus       132 ~~~~iv~isS~~~~~----------~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~-  200 (263)
T PRK08226        132 KDGRIVMMSSVTGDM----------VADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQS-  200 (263)
T ss_pred             CCcEEEEECcHHhcc----------cCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhc-
Confidence            456899998854311          011224679999999999999887654  2799999999999886321110000 


Q ss_pred             CCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCC
Q 028478           83 RGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTG  154 (208)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~  154 (208)
                        .+............+.  ++               ..+...+|+|+++..++... .....++.+-+.++
T Consensus       201 --~~~~~~~~~~~~~~~~--p~---------------~~~~~~~~va~~~~~l~~~~-~~~~~g~~i~~dgg  252 (263)
T PRK08226        201 --NPEDPESVLTEMAKAI--PL---------------RRLADPLEVGELAAFLASDE-SSYLTGTQNVIDGG  252 (263)
T ss_pred             --cCCCcHHHHHHHhccC--CC---------------CCCCCHHHHHHHHHHHcCch-hcCCcCceEeECCC
Confidence              0011111222222211  11               12468899999998887542 22345566666544

>PRK08339 short chain dehydrogenase; Provisional

Probab=96.18  E-value=0.026  Score=44.74  Aligned_cols=126  Identities=7%  Similarity=-0.004  Sum_probs=72.1

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      +.+..++|++||...+..           ......|+.+|.+.+.+.+.++.+.  -++.+..+.||.+-.+...... .
T Consensus       133 ~~~~g~Ii~isS~~~~~~-----------~~~~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~-~  200 (263)
T PRK08339        133 RKGFGRIIYSTSVAIKEP-----------IPNIALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLA-Q  200 (263)
T ss_pred             HcCCCEEEEEcCccccCC-----------CCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHH-H
Confidence            344568999999765421           1124579999999999988887654  1789999999988664210000 0


Q ss_pred             CCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcC
Q 028478           81 DPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTS  158 (208)
Q Consensus        81 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s  158 (208)
                      ........... ..... ...   ++             ..-+...+|+|.++..++... .....++.+.+.++..+|
T Consensus       201 ~~~~~~~~~~~~~~~~~-~~~---~p-------------~~r~~~p~dva~~v~fL~s~~-~~~itG~~~~vdgG~~~~  261 (263)
T PRK08339        201 DRAKREGKSVEEALQEY-AKP---IP-------------LGRLGEPEEIGYLVAFLASDL-GSYINGAMIPVDGGRLNS  261 (263)
T ss_pred             hhhhccCCCHHHHHHHH-hcc---CC-------------cccCcCHHHHHHHHHHHhcch-hcCccCceEEECCCcccc
Confidence            00000000000 11111 111   11             112567899999999988652 223566888887766554

>PRK07063 short chain dehydrogenase; Provisional

Probab=96.14  E-value=0.032  Score=43.87  Aligned_cols=117  Identities=10%  Similarity=0.059  Sum_probs=68.8

Q ss_pred             CCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCC
Q 028478            5 GCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDP   82 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~   82 (208)
                      +..++|++||...+..           ......|+.+|.+.+.+.+.++.++  .++.+..++||.+-.+.....+... 
T Consensus       136 ~~g~iv~isS~~~~~~-----------~~~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~-  203 (260)
T PRK07063        136 GRGSIVNIASTHAFKI-----------IPGCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQ-  203 (260)
T ss_pred             CCeEEEEECChhhccC-----------CCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhcc-
Confidence            4458999999755431           1234579999999999999887654  2799999999988665211000000 


Q ss_pred             CCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           83 RGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                         .+ - ........... ++               .-+...+|+|.+++.++... .....|+.+.+.+|.
T Consensus       204 ---~~-~-~~~~~~~~~~~-~~---------------~r~~~~~~va~~~~fl~s~~-~~~itG~~i~vdgg~  254 (260)
T PRK07063        204 ---PD-P-AAARAETLALQ-PM---------------KRIGRPEEVAMTAVFLASDE-APFINATCITIDGGR  254 (260)
T ss_pred             ---CC-h-HHHHHHHHhcC-CC---------------CCCCCHHHHHHHHHHHcCcc-ccccCCcEEEECCCe
Confidence               00 0 00111111110 11               11456899999999988763 223556777676554

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=96.13  E-value=0.085  Score=41.74  Aligned_cols=93  Identities=14%  Similarity=0.005  Sum_probs=59.0

Q ss_pred             CCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCeeEEEccc
Q 028478           33 EAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTD  110 (208)
Q Consensus        33 ~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  110 (208)
                      .+...|+.+|.+.+.+.+.++.+.  .+++++.++||.+..+..         . .    ........... ++      
T Consensus       168 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~---------~-~----~~~~~~~~~~~-~~------  226 (267)
T TIGR02685       168 LGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDA---------M-P----FEVQEDYRRKV-PL------  226 (267)
T ss_pred             cccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccc---------c-c----hhHHHHHHHhC-CC------
Confidence            345689999999999999987763  289999999998865420         0 0    01111111110 11      


Q ss_pred             cCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478          111 YSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus       111 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                           +   ..+...+|++++++.++... .....++.+.+.++.
T Consensus       227 -----~---~~~~~~~~va~~~~~l~~~~-~~~~~G~~~~v~gg~  262 (267)
T TIGR02685       227 -----G---QREASAEQIADVVIFLVSPK-AKYITGTCIKVDGGL  262 (267)
T ss_pred             -----C---cCCCCHHHHHHHHHHHhCcc-cCCcccceEEECCce
Confidence                 1   12457899999999988752 223456777776554

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK07326 short chain dehydrogenase; Provisional

Probab=96.08  E-value=0.056  Score=41.75  Aligned_cols=57  Identities=11%  Similarity=-0.015  Sum_probs=41.5

Q ss_pred             CCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCC
Q 028478            5 GCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGA   72 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~   72 (208)
                      +..++|++||...+..           ..+...|+.+|.+.+.+.+.+..+.  .+++++++||+.+.++
T Consensus       131 ~~~~iv~~ss~~~~~~-----------~~~~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~  189 (237)
T PRK07326        131 GGGYIINISSLAGTNF-----------FAGGAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATH  189 (237)
T ss_pred             CCeEEEEECChhhccC-----------CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCc
Confidence            4457999998654421           1235679999999998888875332  3899999999988774

>PRK09291 short chain dehydrogenase; Provisional

Probab=96.05  E-value=0.016  Score=45.42  Aligned_cols=58  Identities=19%  Similarity=0.080  Sum_probs=41.7

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVG   71 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G   71 (208)
                      +.+.+++|++||...+..           ......|+.+|.+.|.+.+.+..+.  .+++++++||+.+..
T Consensus       121 ~~~~~~iv~~SS~~~~~~-----------~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t  180 (257)
T PRK09291        121 ARGKGKVVFTSSMAGLIT-----------GPFTGAYCASKHALEAIAEAMHAELKPFGIQVATVNPGPYLT  180 (257)
T ss_pred             hcCCceEEEEcChhhccC-----------CCCcchhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccc
Confidence            456679999999644321           1124679999999999888765531  289999999987643

>PRK07831 short chain dehydrogenase; Provisional

Probab=96.04  E-value=0.018  Score=45.46  Aligned_cols=108  Identities=9%  Similarity=0.005  Sum_probs=66.2

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      .++|++||...+-           +..+...|+.+|.+.+.+.+.++.+.  .++.+.+++|+.+..+..+.       .
T Consensus       150 g~iv~~ss~~~~~-----------~~~~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~-------~  211 (262)
T PRK07831        150 GVIVNNASVLGWR-----------AQHGQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAK-------V  211 (262)
T ss_pred             cEEEEeCchhhcC-----------CCCCCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCccccc-------c
Confidence            3678877754331           11235679999999999999987652  17999999999998863210       0


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecC
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGT  153 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~  153 (208)
                      ...   ..........  ++               .-+...+|+|++++.++.... ....|+.+.+.+
T Consensus       212 ~~~---~~~~~~~~~~--~~---------------~r~~~p~~va~~~~~l~s~~~-~~itG~~i~v~~  259 (262)
T PRK07831        212 TSA---ELLDELAARE--AF---------------GRAAEPWEVANVIAFLASDYS-SYLTGEVVSVSS  259 (262)
T ss_pred             cCH---HHHHHHHhcC--CC---------------CCCcCHHHHHHHHHHHcCchh-cCcCCceEEeCC
Confidence            000   1222222211  11               125577999999999887632 234556666554

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=95.97  E-value=0.093  Score=41.32  Aligned_cols=119  Identities=10%  Similarity=0.049  Sum_probs=69.8

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC-CCccEEEEecccccCCCCCC-CCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD-SEWKIILLRYFNPVGAHPSG-KIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~iiR~~~i~G~~~~~-~~~~~~~~   84 (208)
                      .++|++||...+...           .+...|+.+|.+.+.+++.++.+. +++.+..+.||.+..+.... ..+.....
T Consensus       136 g~iv~~sS~~~~~~~-----------~~~~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~  204 (263)
T PRK06200        136 GSMIFTLSNSSFYPG-----------GGGPLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETS  204 (263)
T ss_pred             CEEEEECChhhcCCC-----------CCCchhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcc
Confidence            378999987665321           224579999999999999988765 46899999999887653110 00000000


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCC
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTG  154 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~  154 (208)
                       ... .+-........   .+             ..-+...+|+|+++..++.........|+.+.+.+|
T Consensus       205 -~~~-~~~~~~~~~~~---~p-------------~~r~~~~~eva~~~~fl~s~~~~~~itG~~i~vdgG  256 (263)
T PRK06200        205 -ISD-SPGLADMIAAI---TP-------------LQFAPQPEDHTGPYVLLASRRNSRALTGVVINADGG  256 (263)
T ss_pred             -ccc-ccchhHHhhcC---CC-------------CCCCCCHHHHhhhhhheecccccCcccceEEEEcCc
Confidence             000 00011111111   11             112567899999999988753123456677777655

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.96  E-value=0.04  Score=43.38  Aligned_cols=106  Identities=11%  Similarity=-0.030  Sum_probs=65.3

Q ss_pred             CCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCC
Q 028478            6 CKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPR   83 (208)
Q Consensus         6 vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~   83 (208)
                      -.+||++||.....           +..+...|+.+|.+.+.+.+.++.+.  .++.++.++||.+-.+..         
T Consensus       147 ~g~iv~isS~~~~~-----------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~---------  206 (256)
T PRK12859        147 GGRIINMTSGQFQG-----------PMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWM---------  206 (256)
T ss_pred             CeEEEEEcccccCC-----------CCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCC---------
Confidence            34899999965432           22345789999999999988887653  279999999988765310         


Q ss_pred             CCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCC
Q 028478           84 GIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTG  154 (208)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~  154 (208)
                            ...........   .+             ...+...+|+|+++..++... .....|+.+.+.++
T Consensus       207 ------~~~~~~~~~~~---~~-------------~~~~~~~~d~a~~~~~l~s~~-~~~~~G~~i~~dgg  254 (256)
T PRK12859        207 ------TEEIKQGLLPM---FP-------------FGRIGEPKDAARLIKFLASEE-AEWITGQIIHSEGG  254 (256)
T ss_pred             ------CHHHHHHHHhc---CC-------------CCCCcCHHHHHHHHHHHhCcc-ccCccCcEEEeCCC
Confidence                  00111111111   01             112456799999999887653 22345566655443

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=95.93  E-value=0.034  Score=43.64  Aligned_cols=110  Identities=9%  Similarity=0.021  Sum_probs=67.1

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      .++|++||...+....           ....|+.+|.+.+.+.+.++.+.  .++.+..++||.+-.+.... +    . 
T Consensus       138 g~iv~isS~~~~~~~~-----------~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~-~----~-  200 (253)
T PRK08993        138 GKIINIASMLSFQGGI-----------RVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQ-L----R-  200 (253)
T ss_pred             eEEEEECchhhccCCC-----------CCcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhh-h----c-
Confidence            3799999987664221           13479999999999998887653  27899999999997752110 0    0 


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCC
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTG  154 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~  154 (208)
                       ..  ....... ...   ++.             .-+...+|+|++++.++... .....|+.+.+.++
T Consensus       201 -~~--~~~~~~~-~~~---~p~-------------~r~~~p~eva~~~~~l~s~~-~~~~~G~~~~~dgg  249 (253)
T PRK08993        201 -AD--EQRSAEI-LDR---IPA-------------GRWGLPSDLMGPVVFLASSA-SDYINGYTIAVDGG  249 (253)
T ss_pred             -cc--hHHHHHH-Hhc---CCC-------------CCCcCHHHHHHHHHHHhCcc-ccCccCcEEEECCC
Confidence             00  0011111 111   110             12567899999999998763 22345566665443

>PRK06483 dihydromonapterin reductase; Provisional

Probab=95.86  E-value=0.15  Score=39.43  Aligned_cols=105  Identities=11%  Similarity=0.003  Sum_probs=65.6

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC-CCccEEEEecccccCCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD-SEWKIILLRYFNPVGAHPSGKIGEDPRGI   85 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~iiR~~~i~G~~~~~~~~~~~~~~   85 (208)
                      .++|++||......           ......|+.+|.+.|.+++.++.++ +++.+..+.|+.+.-..     +  ..  
T Consensus       128 g~iv~~ss~~~~~~-----------~~~~~~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~-----~--~~--  187 (236)
T PRK06483        128 SDIIHITDYVVEKG-----------SDKHIAYAASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNE-----G--DD--  187 (236)
T ss_pred             ceEEEEcchhhccC-----------CCCCccHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCC-----C--CC--
Confidence            47889888543211           1124579999999999999998875 46899999999874321     0  00  


Q ss_pred             CCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           86 PNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                           .........+. ++.              | +...+|+|+++..++..   ....++.+.+.++.
T Consensus       188 -----~~~~~~~~~~~-~~~--------------~-~~~~~~va~~~~~l~~~---~~~~G~~i~vdgg~  233 (236)
T PRK06483        188 -----AAYRQKALAKS-LLK--------------I-EPGEEEIIDLVDYLLTS---CYVTGRSLPVDGGR  233 (236)
T ss_pred             -----HHHHHHHhccC-ccc--------------c-CCCHHHHHHHHHHHhcC---CCcCCcEEEeCccc
Confidence                 01111111111 221              1 34579999999999864   24566777776554

>PRK06197 short chain dehydrogenase; Provisional

Probab=95.86  E-value=0.029  Score=45.44  Aligned_cols=70  Identities=14%  Similarity=-0.055  Sum_probs=44.9

Q ss_pred             cCCCCEEEEecccccc--CCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEE--EecccccCC
Q 028478            3 AHGCKNLVFSSSATVY--GWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIIL--LRYFNPVGA   72 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vy--g~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~i--iR~~~i~G~   72 (208)
                      +.+..++|++||...+  +........++.+..+...|+.+|.+.+.+.+.++.+.  .++++++  +.||.|-.+
T Consensus       141 ~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~  216 (306)
T PRK06197        141 PVPGSRVVTVSSGGHRIRAAIHFDDLQWERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTE  216 (306)
T ss_pred             hCCCCEEEEECCHHHhccCCCCccccCcccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCc
Confidence            3455699999997644  32111222223344566789999999999999887653  2444444  468887664

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=95.70  E-value=0.013  Score=43.61  Aligned_cols=59  Identities=25%  Similarity=0.301  Sum_probs=43.8

Q ss_pred             CccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCc-cEEEEecccccCCCCCCC
Q 028478            1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEW-KIILLRYFNPVGAHPSGK   77 (208)
Q Consensus         1 a~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~-~~~iiR~~~i~G~~~~~~   77 (208)
                      |++.|||+|+.+||...-...             .-.|...|-..|.-+.++     ++ .++|+|||-+.|.++.-+
T Consensus       118 AKe~Gck~fvLvSS~GAd~sS-------------rFlY~k~KGEvE~~v~eL-----~F~~~~i~RPG~ll~~R~esr  177 (238)
T KOG4039|consen  118 AKEKGCKTFVLVSSAGADPSS-------------RFLYMKMKGEVERDVIEL-----DFKHIIILRPGPLLGERTESR  177 (238)
T ss_pred             HHhCCCeEEEEEeccCCCccc-------------ceeeeeccchhhhhhhhc-----cccEEEEecCcceeccccccc
Confidence            578899999999997554321             125777888888888765     33 679999999999875443

>PRK07023 short chain dehydrogenase; Provisional

Probab=95.68  E-value=0.03  Score=43.52  Aligned_cols=58  Identities=16%  Similarity=0.075  Sum_probs=44.1

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC-CCccEEEEecccccCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD-SEWKIILLRYFNPVGA   72 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~iiR~~~i~G~   72 (208)
                      .+..++|++||...+..           ..+...|+.+|...|.+++.++.+. .++.+.+++|+.+-.+
T Consensus       127 ~~~~~iv~isS~~~~~~-----------~~~~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~  185 (243)
T PRK07023        127 AAERRILHISSGAARNA-----------YAGWSVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTG  185 (243)
T ss_pred             cCCCEEEEEeChhhcCC-----------CCCchHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccH
Confidence            45569999999766532           2245789999999999999887542 2799999999887553

>TIGR02415 23BDH acetoin reductases

Probab=95.67  E-value=0.16  Score=39.64  Aligned_cols=54  Identities=9%  Similarity=0.017  Sum_probs=40.3

Q ss_pred             CEEEEeccccc-cCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCC
Q 028478            7 KNLVFSSSATV-YGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGA   72 (208)
Q Consensus         7 k~~i~~SS~~v-yg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~   72 (208)
                      .++|++||... ++.            ...+.|+.+|.+.+.+++.++.++  .++.+.+++|+.+..+
T Consensus       130 ~~iv~~sS~~~~~~~------------~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~  186 (254)
T TIGR02415       130 GKIINAASIAGHEGN------------PILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTP  186 (254)
T ss_pred             eEEEEecchhhcCCC------------CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCh
Confidence            48888888544 332            125679999999999998876653  2689999999988664

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=95.67  E-value=0.18  Score=39.02  Aligned_cols=107  Identities=7%  Similarity=-0.084  Sum_probs=64.5

Q ss_pred             CCCEEEEecccc-ccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCC
Q 028478            5 GCKNLVFSSSAT-VYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         5 ~vk~~i~~SS~~-vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      +..++|++||.. .++.            .....|+.+|.+.+.+.+.++.++  .++.++.++|+.+-++...      
T Consensus       127 ~~~~iv~vsS~~~~~~~------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~------  188 (239)
T TIGR01831       127 QGGRIITLASVSGVMGN------------RGQVNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLA------  188 (239)
T ss_pred             CCeEEEEEcchhhccCC------------CCCcchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccch------
Confidence            345899999854 3432            124579999999888887776542  2799999999998775311      


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecC
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGT  153 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~  153 (208)
                            .+..........-  ++               .-+...+|+++++..++.... ....+....+.+
T Consensus       189 ------~~~~~~~~~~~~~--~~---------------~~~~~~~~va~~~~~l~~~~~-~~~~g~~~~~~g  236 (239)
T TIGR01831       189 ------EVEHDLDEALKTV--PM---------------NRMGQPAEVASLAGFLMSDGA-SYVTRQVISVNG  236 (239)
T ss_pred             ------hhhHHHHHHHhcC--CC---------------CCCCCHHHHHHHHHHHcCchh-cCccCCEEEecC
Confidence                  0111111221111  11               124567999999999987632 223445554443

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=95.62  E-value=0.28  Score=38.54  Aligned_cols=110  Identities=9%  Similarity=-0.067  Sum_probs=65.0

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      .++|++||...+           .+..+...|+.+|.+.+.+.+.++.++  .++.+..++|+.+-.+.....+      
T Consensus       138 g~iv~~sS~~~~-----------~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~------  200 (261)
T PRK08936        138 GNIINMSSVHEQ-----------IPWPLFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKF------  200 (261)
T ss_pred             cEEEEEcccccc-----------CCCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCcccccc------
Confidence            478999885332           223345689999988887777765433  2799999999999876321100      


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCC
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTG  154 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~  154 (208)
                        .. ....... ...   .+             ...+...+|+++++..++... .....+..+.+.++
T Consensus       201 --~~-~~~~~~~-~~~---~~-------------~~~~~~~~~va~~~~~l~s~~-~~~~~G~~i~~d~g  249 (261)
T PRK08936        201 --AD-PKQRADV-ESM---IP-------------MGYIGKPEEIAAVAAWLASSE-ASYVTGITLFADGG  249 (261)
T ss_pred             --CC-HHHHHHH-Hhc---CC-------------CCCCcCHHHHHHHHHHHcCcc-cCCccCcEEEECCC
Confidence              00 0011111 111   11             112567899999999988763 22344566655544

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=95.62  E-value=0.16  Score=39.82  Aligned_cols=110  Identities=10%  Similarity=0.023  Sum_probs=67.1

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      .++|++||...+....           ....|+.+|.+.+.+.+.++.+.  .++.+..++||.+-.+.....     . 
T Consensus       136 g~ii~isS~~~~~~~~-----------~~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~-----~-  198 (251)
T PRK12481        136 GKIINIASMLSFQGGI-----------RVPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAAL-----R-  198 (251)
T ss_pred             CEEEEeCChhhcCCCC-----------CCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhc-----c-
Confidence            4899999977654211           13479999999999998877642  179999999998876421100     0 


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCC
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTG  154 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~  154 (208)
                       ..  ........ ..   ++.         +    .+...+|+|+++..++... .....++.+.+.++
T Consensus       199 -~~--~~~~~~~~-~~---~p~---------~----~~~~peeva~~~~~L~s~~-~~~~~G~~i~vdgg  247 (251)
T PRK12481        199 -AD--TARNEAIL-ER---IPA---------S----RWGTPDDLAGPAIFLSSSA-SDYVTGYTLAVDGG  247 (251)
T ss_pred             -cC--hHHHHHHH-hc---CCC---------C----CCcCHHHHHHHHHHHhCcc-ccCcCCceEEECCC
Confidence             00  00111111 11   111         1    2567899999999998652 22355677766544

>PRK07904 short chain dehydrogenase; Provisional

Probab=95.62  E-value=0.089  Score=41.41  Aligned_cols=58  Identities=16%  Similarity=0.083  Sum_probs=42.1

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhh---cCCCccEEEEecccccCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHR---SDSEWKIILLRYFNPVGA   72 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~~~~~~iiR~~~i~G~   72 (208)
                      +.+..++|++||...+..           ..+...|+.||.+...+.+.++.   .+ ++++++++||.+..+
T Consensus       135 ~~~~~~iv~isS~~g~~~-----------~~~~~~Y~~sKaa~~~~~~~l~~el~~~-~i~v~~v~Pg~v~t~  195 (253)
T PRK07904        135 AQGFGQIIAMSSVAGERV-----------RRSNFVYGSTKAGLDGFYLGLGEALREY-GVRVLVVRPGQVRTR  195 (253)
T ss_pred             hcCCceEEEEechhhcCC-----------CCCCcchHHHHHHHHHHHHHHHHHHhhc-CCEEEEEeeCceecc
Confidence            455679999999754321           12345799999999877666543   34 899999999999875

>PRK07578 short chain dehydrogenase; Provisional

Probab=95.60  E-value=0.064  Score=40.41  Aligned_cols=92  Identities=11%  Similarity=0.066  Sum_probs=59.7

Q ss_pred             EEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC-CCccEEEEecccccCCCCCCCCCCCCCCCC
Q 028478            8 NLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD-SEWKIILLRYFNPVGAHPSGKIGEDPRGIP   86 (208)
Q Consensus         8 ~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~iiR~~~i~G~~~~~~~~~~~~~~~   86 (208)
                      +++++||.....           +......|+.+|.+.+.+.+.++.++ .++.+..+.|+.+-.+.             
T Consensus       106 ~iv~iss~~~~~-----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~gi~v~~i~Pg~v~t~~-------------  161 (199)
T PRK07578        106 SFTLTSGILSDE-----------PIPGGASAATVNGALEGFVKAAALELPRGIRINVVSPTVLTESL-------------  161 (199)
T ss_pred             eEEEEcccccCC-----------CCCCchHHHHHHHHHHHHHHHHHHHccCCeEEEEEcCCcccCch-------------
Confidence            688888754321           11235689999999999998887653 27889999987664320             


Q ss_pred             CChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEe
Q 028478           87 NNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNL  151 (208)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni  151 (208)
                            . .  .+.  .+          ++   ..++..+|+|+++..+++.    ...+++|++
T Consensus       162 ------~-~--~~~--~~----------~~---~~~~~~~~~a~~~~~~~~~----~~~g~~~~~  198 (199)
T PRK07578        162 ------E-K--YGP--FF----------PG---FEPVPAARVALAYVRSVEG----AQTGEVYKV  198 (199)
T ss_pred             ------h-h--hhh--cC----------CC---CCCCCHHHHHHHHHHHhcc----ceeeEEecc
Confidence                  0 0  010  01          11   1257899999999999887    345577765

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=95.51  E-value=0.13  Score=40.17  Aligned_cols=96  Identities=14%  Similarity=0.073  Sum_probs=61.3

Q ss_pred             EEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCCC
Q 028478            8 NLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRGI   85 (208)
Q Consensus         8 ~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~~   85 (208)
                      ++|.+||+.--           .+....+.|+.+|+....+....+.+.  -+++++.+-||.+-....+......+.. 
T Consensus       134 ~IiN~~SiAG~-----------~~y~~~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~-  201 (246)
T COG4221         134 HIINLGSIAGR-----------YPYPGGAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDE-  201 (246)
T ss_pred             eEEEecccccc-----------ccCCCCccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhh-
Confidence            89999996521           111225689999999998888876653  2788999998888554322221111110 


Q ss_pred             CCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCC
Q 028478           86 PNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDD  141 (208)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~  141 (208)
                            .+.+...+                    ...+..+|+|+++.++++.|..
T Consensus       202 ------~~~~~y~~--------------------~~~l~p~dIA~~V~~~~~~P~~  231 (246)
T COG4221         202 ------RADKVYKG--------------------GTALTPEDIAEAVLFAATQPQH  231 (246)
T ss_pred             ------hHHHHhcc--------------------CCCCCHHHHHHHHHHHHhCCCc
Confidence                  12222121                    2468899999999999999643

>PRK07576 short chain dehydrogenase; Provisional

Probab=95.45  E-value=0.12  Score=40.96  Aligned_cols=112  Identities=10%  Similarity=0.030  Sum_probs=66.9

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      .++|++||...+..           ......|+.+|.+.+.+++.++.+.  .++.++.++|+.+.+....      ...
T Consensus       137 g~iv~iss~~~~~~-----------~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~------~~~  199 (264)
T PRK07576        137 ASIIQISAPQAFVP-----------MPMQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGM------ARL  199 (264)
T ss_pred             CEEEEECChhhccC-----------CCCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHH------hhc
Confidence            48899998654321           1235689999999999999886653  2789999999988753100      000


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                      .++.   .........   ++             .+.+...+|+|++++.++..+ .....+..+.+.++.
T Consensus       200 ~~~~---~~~~~~~~~---~~-------------~~~~~~~~dva~~~~~l~~~~-~~~~~G~~~~~~gg~  250 (264)
T PRK07576        200 APSP---ELQAAVAQS---VP-------------LKRNGTKQDIANAALFLASDM-ASYITGVVLPVDGGW  250 (264)
T ss_pred             ccCH---HHHHHHHhc---CC-------------CCCCCCHHHHHHHHHHHcChh-hcCccCCEEEECCCc
Confidence            0000   111111111   11             123567899999999999763 223455666666554

>PRK06101 short chain dehydrogenase; Provisional

Probab=95.37  E-value=0.054  Score=42.11  Aligned_cols=54  Identities=13%  Similarity=0.111  Sum_probs=40.2

Q ss_pred             CEEEEecccc-ccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCC
Q 028478            7 KNLVFSSSAT-VYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGA   72 (208)
Q Consensus         7 k~~i~~SS~~-vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~   72 (208)
                      .++|++||.. .++            ......|+.+|...+.+.+.++.+.  .++.++++||+.+.++
T Consensus       121 ~~iv~isS~~~~~~------------~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~  177 (240)
T PRK06101        121 HRVVIVGSIASELA------------LPRAEAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATP  177 (240)
T ss_pred             CeEEEEechhhccC------------CCCCchhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCC
Confidence            4788888753 222            1234589999999999998876422  2899999999999986

>PRK07677 short chain dehydrogenase; Provisional

Probab=95.30  E-value=0.26  Score=38.48  Aligned_cols=111  Identities=8%  Similarity=-0.079  Sum_probs=65.3

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC-C--CccEEEEecccccCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD-S--EWKIILLRYFNPVGAHPSGKIGEDPR   83 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~--~~~~~iiR~~~i~G~~~~~~~~~~~~   83 (208)
                      .++|++||...+..           ......|+.+|.+.+.+.+.++.++ +  ++++..++||.+.+.......     
T Consensus       131 g~ii~isS~~~~~~-----------~~~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~-----  194 (252)
T PRK07677        131 GNIINMVATYAWDA-----------GPGVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKL-----  194 (252)
T ss_pred             EEEEEEcChhhccC-----------CCCCcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccc-----
Confidence            47888988643311           1123579999999999998866553 1  799999999988753110000     


Q ss_pred             CCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCC
Q 028478           84 GIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTG  154 (208)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~  154 (208)
                      ...   -.......+..  ++               .-+...+|+|+++..++... .....|+.+.+.++
T Consensus       195 ~~~---~~~~~~~~~~~--~~---------------~~~~~~~~va~~~~~l~~~~-~~~~~g~~~~~~gg  244 (252)
T PRK07677        195 WES---EEAAKRTIQSV--PL---------------GRLGTPEEIAGLAYFLLSDE-AAYINGTCITMDGG  244 (252)
T ss_pred             cCC---HHHHHHHhccC--CC---------------CCCCCHHHHHHHHHHHcCcc-ccccCCCEEEECCC
Confidence            000   01222222211  11               12567799999998887652 22355677777654

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=95.27  E-value=0.27  Score=38.57  Aligned_cols=123  Identities=9%  Similarity=-0.064  Sum_probs=69.2

Q ss_pred             CCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCC
Q 028478            6 CKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPR   83 (208)
Q Consensus         6 vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~   83 (208)
                      -.+||++||......           ..+...|+.+|...+.+.+.++.++  .++.+..+.||.+-.+...........
T Consensus       130 ~g~iv~isS~~~~~~-----------~~~~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~  198 (259)
T PRK08340        130 KGVLVYLSSVSVKEP-----------MPPLVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAE  198 (259)
T ss_pred             CCEEEEEeCcccCCC-----------CCCchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhh
Confidence            348999999765421           1235689999999999999988765  268888899887765421000000000


Q ss_pred             CCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           84 GIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                      ......-..........   ++             ..-+...+|+|+++..++..+ .+...|++..+.++..
T Consensus       199 ~~~~~~~~~~~~~~~~~---~p-------------~~r~~~p~dva~~~~fL~s~~-~~~itG~~i~vdgg~~  254 (259)
T PRK08340        199 ERGVSFEETWEREVLER---TP-------------LKRTGRWEELGSLIAFLLSEN-AEYMLGSTIVFDGAMT  254 (259)
T ss_pred             ccCCchHHHHHHHHhcc---CC-------------ccCCCCHHHHHHHHHHHcCcc-cccccCceEeecCCcC
Confidence            00000000000111111   11             112567899999999988763 2345667776766543

>PRK05867 short chain dehydrogenase; Provisional

Probab=95.13  E-value=0.26  Score=38.48  Aligned_cols=109  Identities=6%  Similarity=-0.089  Sum_probs=66.9

Q ss_pred             EEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCCC
Q 028478            8 NLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRGI   85 (208)
Q Consensus         8 ~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~~   85 (208)
                      ++|++||....-.  .       .......|+.+|.+.+.+.+.++.++  .++.+..++||.+-.+...          
T Consensus       140 ~iv~~sS~~~~~~--~-------~~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~----------  200 (253)
T PRK05867        140 VIINTASMSGHII--N-------VPQQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVE----------  200 (253)
T ss_pred             EEEEECcHHhcCC--C-------CCCCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccc----------
Confidence            6888887543210  0       00123579999999999999887653  2799999999998765211          


Q ss_pred             CCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           86 PNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                        .+...........  ++               .-+...+|+|+++..++... .....|+++.+.+|.
T Consensus       201 --~~~~~~~~~~~~~--~~---------------~r~~~p~~va~~~~~L~s~~-~~~~tG~~i~vdgG~  250 (253)
T PRK05867        201 --PYTEYQPLWEPKI--PL---------------GRLGRPEELAGLYLYLASEA-SSYMTGSDIVIDGGY  250 (253)
T ss_pred             --cchHHHHHHHhcC--CC---------------CCCcCHHHHHHHHHHHcCcc-cCCcCCCeEEECCCc
Confidence              0111111111111  11               12567899999999998752 234566777776654

>PRK09072 short chain dehydrogenase; Provisional

Probab=95.04  E-value=0.22  Score=39.15  Aligned_cols=56  Identities=13%  Similarity=0.033  Sum_probs=38.9

Q ss_pred             CCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCC
Q 028478            6 CKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGA   72 (208)
Q Consensus         6 vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~   72 (208)
                      ..++|++||...+..           ......|+.+|.+.+.+++.++.++  .++.+..+.|+.+-++
T Consensus       131 ~~~iv~isS~~~~~~-----------~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~  188 (263)
T PRK09072        131 SAMVVNVGSTFGSIG-----------YPGYASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTA  188 (263)
T ss_pred             CCEEEEecChhhCcC-----------CCCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccc
Confidence            357888887543311           1124679999999998888877653  2688888998877654

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.96  E-value=0.62  Score=37.76  Aligned_cols=49  Identities=18%  Similarity=0.050  Sum_probs=35.4

Q ss_pred             EEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecc
Q 028478            8 NLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYF   67 (208)
Q Consensus         8 ~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~   67 (208)
                      ++|++||...+...           .....|+.+|.+.+.+.+.++.+.  .++.+..+.|+
T Consensus       149 ~iv~isS~~~~~~~-----------~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg  199 (306)
T PRK07792        149 RIVNTSSEAGLVGP-----------VGQANYGAAKAGITALTLSAARALGRYGVRANAICPR  199 (306)
T ss_pred             EEEEECCcccccCC-----------CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCC
Confidence            78999886544211           124579999999999998877642  17888888876

>PRK07201 short chain dehydrogenase; Provisional

Probab=94.94  E-value=0.068  Score=48.00  Aligned_cols=59  Identities=10%  Similarity=-0.008  Sum_probs=46.3

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGA   72 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~   72 (208)
                      +.+..++|++||...+...           .....|+.+|.+.+.+.+.++.+.  .++.+++++||.+..+
T Consensus       498 ~~~~g~iv~isS~~~~~~~-----------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~  558 (657)
T PRK07201        498 ERRFGHVVNVSSIGVQTNA-----------PRFSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTP  558 (657)
T ss_pred             hcCCCEEEEECChhhcCCC-----------CCcchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCccc
Confidence            4566799999998877531           124679999999999998876553  2799999999999875

>PRK06139 short chain dehydrogenase; Provisional

Probab=94.80  E-value=0.15  Score=42.00  Aligned_cols=92  Identities=9%  Similarity=-0.043  Sum_probs=58.0

Q ss_pred             CCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC---CCccEEEEecccccCCCCCCCCCCC
Q 028478            5 GCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD---SEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      +..++|++||...+...           .....|+.+|.+.+.+.+.+..+.   +++.++.+.|+.+-++....     
T Consensus       134 ~~g~iV~isS~~~~~~~-----------p~~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~-----  197 (330)
T PRK06139        134 GHGIFINMISLGGFAAQ-----------PYAAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRH-----  197 (330)
T ss_pred             CCCEEEEEcChhhcCCC-----------CCchhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccc-----
Confidence            33478999987655321           124679999998776666665432   27899999999998863110     


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhh
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHK  138 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  138 (208)
                       ..          . ..+.  .            ......+++.+|+|++++.++++
T Consensus       198 -~~----------~-~~~~--~------------~~~~~~~~~pe~vA~~il~~~~~  228 (330)
T PRK06139        198 -GA----------N-YTGR--R------------LTPPPPVYDPRRVAKAVVRLADR  228 (330)
T ss_pred             -cc----------c-cccc--c------------ccCCCCCCCHHHHHHHHHHHHhC
Confidence             00          0 0011  0            00112357899999999999987

>PRK07102 short chain dehydrogenase; Provisional

Probab=94.77  E-value=0.086  Score=40.95  Aligned_cols=58  Identities=14%  Similarity=0.008  Sum_probs=42.4

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGA   72 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~   72 (208)
                      .+..++|++||......           ......|+.+|...+.+.+.++.+.  .++.+.+++|+.+.++
T Consensus       125 ~~~~~iv~~sS~~~~~~-----------~~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~  184 (243)
T PRK07102        125 RGSGTIVGISSVAGDRG-----------RASNYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTP  184 (243)
T ss_pred             CCCCEEEEEecccccCC-----------CCCCcccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCh
Confidence            45678999998643211           1123579999999999998876532  2799999999999885

>PRK05866 short chain dehydrogenase; Provisional

Probab=94.73  E-value=0.082  Score=42.63  Aligned_cols=60  Identities=12%  Similarity=0.056  Sum_probs=43.2

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGA   72 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~   72 (208)
                      +.+..++|++||..++...          ....+.|+.+|.+.+.+++.++.+.  .++.+++++||.+-.+
T Consensus       167 ~~~~g~iv~isS~~~~~~~----------~p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~  228 (293)
T PRK05866        167 ERGDGHIINVATWGVLSEA----------SPLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATP  228 (293)
T ss_pred             hcCCcEEEEECChhhcCCC----------CCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCc
Confidence            4456689999997655311          1124689999999999888876543  2799999999876654

>PRK07062 short chain dehydrogenase; Provisional

Probab=94.67  E-value=0.43  Score=37.53  Aligned_cols=122  Identities=7%  Similarity=-0.008  Sum_probs=68.0

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      .+..++|++||...+...           .....|+.+|.+.+.+.+.++.+.  .++.+..+.||.+-.+.....+.. 
T Consensus       136 ~~~g~iv~isS~~~~~~~-----------~~~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~-  203 (265)
T PRK07062        136 SAAASIVCVNSLLALQPE-----------PHMVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEA-  203 (265)
T ss_pred             cCCcEEEEeccccccCCC-----------CCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHH-
Confidence            344589999997554311           124579999999888887766543  279999999998876521110000 


Q ss_pred             CCCCCC-ChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCC
Q 028478           82 PRGIPN-NLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTG  154 (208)
Q Consensus        82 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~  154 (208)
                       ..... .+..+........  .++             ..-+...+|+|+++..++... .....|+++.+.++
T Consensus       204 -~~~~~~~~~~~~~~~~~~~--~~p-------------~~r~~~p~~va~~~~~L~s~~-~~~~tG~~i~vdgg  260 (265)
T PRK07062        204 -RADPGQSWEAWTAALARKK--GIP-------------LGRLGRPDEAARALFFLASPL-SSYTTGSHIDVSGG  260 (265)
T ss_pred             -hhccCCChHHHHHHHhhcC--CCC-------------cCCCCCHHHHHHHHHHHhCch-hcccccceEEEcCc
Confidence             00000 0001111111111  011             112567899999999988652 22355677777655

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=94.61  E-value=0.038  Score=43.02  Aligned_cols=109  Identities=11%  Similarity=0.046  Sum_probs=67.9

Q ss_pred             EEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC-C--CccEEEEecccccCCCCCCCCCCCCCC
Q 028478            8 NLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD-S--EWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         8 ~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~--~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      ++|++||......           ......|+.+|.+.+.+.+.++.+. |  ++++..+.||.+-.+...        .
T Consensus       128 sii~iss~~~~~~-----------~~~~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~--------~  188 (241)
T PF13561_consen  128 SIINISSIAAQRP-----------MPGYSAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTE--------R  188 (241)
T ss_dssp             EEEEEEEGGGTSB-----------STTTHHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHH--------H
T ss_pred             Ccccccchhhccc-----------CccchhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchh--------c
Confidence            6888888654321           1224589999999999998876544 3  899999999988864100        0


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCC
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTG  154 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~  154 (208)
                       ....-.+.......-  |+               .-+...+|+|.++..++... .....|+++.+-+|
T Consensus       189 -~~~~~~~~~~~~~~~--pl---------------~r~~~~~evA~~v~fL~s~~-a~~itG~~i~vDGG  239 (241)
T PF13561_consen  189 -IPGNEEFLEELKKRI--PL---------------GRLGTPEEVANAVLFLASDA-ASYITGQVIPVDGG  239 (241)
T ss_dssp             -HHTHHHHHHHHHHHS--TT---------------SSHBEHHHHHHHHHHHHSGG-GTTGTSEEEEESTT
T ss_pred             -cccccchhhhhhhhh--cc---------------CCCcCHHHHHHHHHHHhCcc-ccCccCCeEEECCC
Confidence             000001222222211  11               12568999999999999762 22466788877654

...

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=94.51  E-value=0.19  Score=42.45  Aligned_cols=62  Identities=16%  Similarity=0.018  Sum_probs=38.7

Q ss_pred             CccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCC
Q 028478            1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGA   72 (208)
Q Consensus         1 a~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~   72 (208)
                      |+.+|++|++++||+..-......+....     ...+-.+|..+|+.+.+     ++++++|+|++...-.
T Consensus       188 ~~~aGvk~~vlv~si~~~~~~~~~~~~~~-----~~~~~~~k~~~e~~~~~-----Sgl~ytiIR~g~~~~~  249 (411)
T KOG1203|consen  188 CKKAGVKRVVLVGSIGGTKFNQPPNILLL-----NGLVLKAKLKAEKFLQD-----SGLPYTIIRPGGLEQD  249 (411)
T ss_pred             HHHhCCceEEEEEeecCcccCCCchhhhh-----hhhhhHHHHhHHHHHHh-----cCCCcEEEeccccccC
Confidence            46689999999998644321111000000     12344777788877774     2999999999877653

>PRK05872 short chain dehydrogenase; Provisional

Probab=94.46  E-value=0.34  Score=39.04  Aligned_cols=97  Identities=10%  Similarity=0.037  Sum_probs=60.7

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      .+||++||...+...           .....|+.+|...+.+.+.++.+.  .++.+.++.|+.+..+......      
T Consensus       136 g~iv~isS~~~~~~~-----------~~~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~------  198 (296)
T PRK05872        136 GYVLQVSSLAAFAAA-----------PGMAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDAD------  198 (296)
T ss_pred             CEEEEEeCHhhcCCC-----------CCchHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhcc------
Confidence            379999997665321           124679999999999998876432  2789999999988775311100      


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhh
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHK  138 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  138 (208)
                       ..  ...+.......  +.+             ...++..+|+|+++..++..
T Consensus       199 -~~--~~~~~~~~~~~--~~p-------------~~~~~~~~~va~~i~~~~~~  234 (296)
T PRK05872        199 -AD--LPAFRELRARL--PWP-------------LRRTTSVEKCAAAFVDGIER  234 (296)
T ss_pred             -cc--chhHHHHHhhC--CCc-------------ccCCCCHHHHHHHHHHHHhc
Confidence             00  01121221111  111             11356899999999999987

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=94.38  E-value=0.11  Score=40.49  Aligned_cols=59  Identities=15%  Similarity=0.094  Sum_probs=42.0

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGA   72 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~   72 (208)
                      +.+..+||++||......           ......|+.+|.+.+.+++.+..++  .++.+.+++|+.+-++
T Consensus       141 ~~~~~~iv~~ss~~~~~~-----------~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~  201 (247)
T PRK08945        141 KSPAASLVFTSSSVGRQG-----------RANWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTA  201 (247)
T ss_pred             hCCCCEEEEEccHhhcCC-----------CCCCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCc
Confidence            346678999998654321           1124579999999999999887654  2577888888777654

>PRK07791 short chain dehydrogenase; Provisional

Probab=94.36  E-value=0.56  Score=37.62  Aligned_cols=106  Identities=10%  Similarity=-0.008  Sum_probs=63.4

Q ss_pred             EEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCCC
Q 028478            8 NLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRGI   85 (208)
Q Consensus         8 ~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~~   85 (208)
                      +||++||....-..           .....|+.+|.+.+.+.+.++.+.  .++.+..+.|+ +-.+.            
T Consensus       151 ~Iv~isS~~~~~~~-----------~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~------------  206 (286)
T PRK07791        151 RIINTSSGAGLQGS-----------VGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRM------------  206 (286)
T ss_pred             EEEEeCchhhCcCC-----------CCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCc------------
Confidence            79999986543211           124679999999999988876653  27899999987 32210            


Q ss_pred             CCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           86 PNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                         ............  +           .+  ...+...+|+|++++.++... .....|+.+.+.++..
T Consensus       207 ---~~~~~~~~~~~~--~-----------~~--~~~~~~pedva~~~~~L~s~~-~~~itG~~i~vdgG~~  258 (286)
T PRK07791        207 ---TETVFAEMMAKP--E-----------EG--EFDAMAPENVSPLVVWLGSAE-SRDVTGKVFEVEGGKI  258 (286)
T ss_pred             ---chhhHHHHHhcC--c-----------cc--ccCCCCHHHHHHHHHHHhCch-hcCCCCcEEEEcCCce
Confidence               000111111110  0           01  112457899999999988652 2235667777765553

>PRK06125 short chain dehydrogenase; Provisional

Probab=94.20  E-value=0.39  Score=37.68  Aligned_cols=55  Identities=7%  Similarity=-0.133  Sum_probs=38.8

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGA   72 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~   72 (208)
                      .++|++||..-.           .+......|+.+|.+.+.+.+.++.+.  .++.+..+.||.+-.+
T Consensus       133 g~iv~iss~~~~-----------~~~~~~~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~  189 (259)
T PRK06125        133 GVIVNVIGAAGE-----------NPDADYICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATD  189 (259)
T ss_pred             cEEEEecCcccc-----------CCCCCchHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccH
Confidence            478888875322           111234578999999999988876532  2799999999888765

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=94.18  E-value=0.37  Score=37.97  Aligned_cols=110  Identities=13%  Similarity=0.101  Sum_probs=66.0

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      .++|++||.....           +......|+.+|.+.+.+.+.++.++  .++.+..+.||.+-.+....     .. 
T Consensus       141 g~Iv~isS~~~~~-----------~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~-----~~-  203 (258)
T PRK07370        141 GSIVTLTYLGGVR-----------AIPNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSA-----VG-  203 (258)
T ss_pred             CeEEEEecccccc-----------CCcccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhc-----cc-
Confidence            3789998854321           11234579999999999999987754  27899999999887652100     00 


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCC
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTG  154 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~  154 (208)
                         ........... .. ++               .-+...+|+|.++..++... .....++++.+.++
T Consensus       204 ---~~~~~~~~~~~-~~-p~---------------~r~~~~~dva~~~~fl~s~~-~~~~tG~~i~vdgg  252 (258)
T PRK07370        204 ---GILDMIHHVEE-KA-PL---------------RRTVTQTEVGNTAAFLLSDL-ASGITGQTIYVDAG  252 (258)
T ss_pred             ---cchhhhhhhhh-cC-Cc---------------CcCCCHHHHHHHHHHHhChh-hccccCcEEEECCc
Confidence               00001111111 10 11               12566799999999998753 22345577766544

>PRK08278 short chain dehydrogenase; Provisional

Probab=94.04  E-value=0.6  Score=37.05  Aligned_cols=37  Identities=8%  Similarity=-0.087  Sum_probs=29.8

Q ss_pred             CCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccc
Q 028478           33 EAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNP   69 (208)
Q Consensus        33 ~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i   69 (208)
                      .+...|+.+|.+.|.+++.++.++  .++.+..+.|+.+
T Consensus       159 ~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~  197 (273)
T PRK08278        159 APHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTT  197 (273)
T ss_pred             CCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCc
Confidence            346789999999999999987764  2688888888743

>PRK05854 short chain dehydrogenase; Provisional

Probab=93.95  E-value=0.15  Score=41.49  Aligned_cols=66  Identities=14%  Similarity=0.006  Sum_probs=47.4

Q ss_pred             CEEEEecccccc-CCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC----CCccEEEEecccccCC
Q 028478            7 KNLVFSSSATVY-GWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD----SEWKIILLRYFNPVGA   72 (208)
Q Consensus         7 k~~i~~SS~~vy-g~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~iiR~~~i~G~   72 (208)
                      .++|++||...+ +.....++.++.+..+...|+.||.+.+.+.+.++++.    .++.+..+.||.+-..
T Consensus       143 ~riv~vsS~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~  213 (313)
T PRK05854        143 ARVTSQSSIAARRGAINWDDLNWERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTN  213 (313)
T ss_pred             CCeEEEechhhcCCCcCcccccccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccC
Confidence            478999886543 33233344455555667889999999999999886531    2689999999988664

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=93.95  E-value=0.44  Score=37.54  Aligned_cols=109  Identities=11%  Similarity=0.071  Sum_probs=64.6

Q ss_pred             EEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCCC
Q 028478            8 NLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRGI   85 (208)
Q Consensus         8 ~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~~   85 (208)
                      ++|++||....-           +......|+.+|.+.+.+.+.++.++  .++.+..+.||.+-.+....   .  .  
T Consensus       142 ~Iv~isS~~~~~-----------~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~---~--~--  203 (257)
T PRK08594        142 SIVTLTYLGGER-----------VVQNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKG---V--G--  203 (257)
T ss_pred             eEEEEcccCCcc-----------CCCCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhh---h--c--
Confidence            789998854321           11124579999999999999887654  27899999998887642100   0  0  


Q ss_pred             CCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCC
Q 028478           86 PNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTG  154 (208)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~  154 (208)
                        .+....... ...   .+             ...+...+|+|++++.++... .....++.+.+.++
T Consensus       204 --~~~~~~~~~-~~~---~p-------------~~r~~~p~~va~~~~~l~s~~-~~~~tG~~~~~dgg  252 (257)
T PRK08594        204 --GFNSILKEI-EER---AP-------------LRRTTTQEEVGDTAAFLFSDL-SRGVTGENIHVDSG  252 (257)
T ss_pred             --cccHHHHHH-hhc---CC-------------ccccCCHHHHHHHHHHHcCcc-cccccceEEEECCc
Confidence              000011111 111   11             112467899999999988752 22345577766544

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=93.88  E-value=0.85  Score=35.94  Aligned_cols=109  Identities=11%  Similarity=0.072  Sum_probs=65.2

Q ss_pred             EEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCCC
Q 028478            8 NLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRGI   85 (208)
Q Consensus         8 ~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~~   85 (208)
                      ++|++||.....           +......|+.+|.+.+.+.+.++.+.  .++.+..+.||.+-.+....    .    
T Consensus       141 ~Iv~isS~~~~~-----------~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~----~----  201 (260)
T PRK06603        141 SIVTLTYYGAEK-----------VIPNYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSA----I----  201 (260)
T ss_pred             eEEEEecCcccc-----------CCCcccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhc----C----
Confidence            788988854321           11124579999999999998887654  27999999999886642100    0    


Q ss_pred             CCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCC
Q 028478           86 PNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTG  154 (208)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~  154 (208)
                       ............ .. |+               .-+...+|+|+++..++... .....++.+.+.++
T Consensus       202 -~~~~~~~~~~~~-~~-p~---------------~r~~~pedva~~~~~L~s~~-~~~itG~~i~vdgG  251 (260)
T PRK06603        202 -GDFSTMLKSHAA-TA-PL---------------KRNTTQEDVGGAAVYLFSEL-SKGVTGEIHYVDCG  251 (260)
T ss_pred             -CCcHHHHHHHHh-cC-Cc---------------CCCCCHHHHHHHHHHHhCcc-cccCcceEEEeCCc
Confidence             000111111111 10 11               12467899999999998752 22345577766554

>PRK08267 short chain dehydrogenase; Provisional

Probab=93.63  E-value=0.19  Score=39.41  Aligned_cols=57  Identities=18%  Similarity=0.207  Sum_probs=41.9

Q ss_pred             CCCCEEEEecccc-ccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCC
Q 028478            4 HGCKNLVFSSSAT-VYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGA   72 (208)
Q Consensus         4 ~~vk~~i~~SS~~-vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~   72 (208)
                      .+..++|++||.. ++|..            ....|+.+|.+.+.+.+.+..+.  .++++++++|+.+-.+
T Consensus       126 ~~~~~iv~isS~~~~~~~~------------~~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~  185 (260)
T PRK08267        126 TPGARVINTSSASAIYGQP------------GLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTA  185 (260)
T ss_pred             CCCCEEEEeCchhhCcCCC------------CchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCc
Confidence            3456899999864 34321            24579999999999888876543  2799999999888764

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=93.50  E-value=0.21  Score=39.29  Aligned_cols=54  Identities=15%  Similarity=-0.012  Sum_probs=40.7

Q ss_pred             CCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEeccccc
Q 028478            6 CKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPV   70 (208)
Q Consensus         6 vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~   70 (208)
                      -.++|++||...+...           .....|+.+|.+.+.+++.++.+.  .++.+.+++||.+-
T Consensus       137 ~g~iv~isS~~~~~~~-----------~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~  192 (266)
T PRK06171        137 DGVIVNMSSEAGLEGS-----------EGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILE  192 (266)
T ss_pred             CcEEEEEccccccCCC-----------CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccc
Confidence            3479999987654321           124689999999999998887653  27999999999874

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=93.48  E-value=0.27  Score=40.02  Aligned_cols=40  Identities=15%  Similarity=0.086  Sum_probs=31.1

Q ss_pred             CCCCChHHHhHHHHHHHHHHHhhcC---CCccEEEEecccccC
Q 028478           32 LEAMNPYGRTKLFIEEICRDVHRSD---SEWKIILLRYFNPVG   71 (208)
Q Consensus        32 ~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~iiR~~~i~G   71 (208)
                      ..+...|+.||.+...+.+.++++.   .++.++.+.||.|..
T Consensus       183 ~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~  225 (314)
T TIGR01289       183 FKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIAD  225 (314)
T ss_pred             cchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccC
Confidence            3456789999999888777776542   278999999999864

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=93.41  E-value=1.8  Score=33.87  Aligned_cols=110  Identities=11%  Similarity=0.061  Sum_probs=66.0

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      .++|++||.....           +......|+.+|.+.+.+.+.++.+.  .++.+..+.||.|-.+.....     . 
T Consensus       137 g~Iv~iss~~~~~-----------~~~~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~-----~-  199 (252)
T PRK06079        137 ASIVTLTYFGSER-----------AIPNYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGI-----K-  199 (252)
T ss_pred             ceEEEEeccCccc-----------cCCcchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccC-----C-
Confidence            3788888754321           11224679999999999999887654  279999999998876521100     0 


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCC
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTG  154 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~  154 (208)
                        + -....... .... ++               .-+...+|+|+++..++... .+...++++.+.++
T Consensus       200 --~-~~~~~~~~-~~~~-p~---------------~r~~~pedva~~~~~l~s~~-~~~itG~~i~vdgg  248 (252)
T PRK06079        200 --G-HKDLLKES-DSRT-VD---------------GVGVTIEEVGNTAAFLLSDL-STGVTGDIIYVDKG  248 (252)
T ss_pred             --C-hHHHHHHH-HhcC-cc---------------cCCCCHHHHHHHHHHHhCcc-cccccccEEEeCCc
Confidence              0 00111111 1111 11               12567899999999998752 22345566666544

>PRK06484 short chain dehydrogenase; Validated

Probab=93.33  E-value=0.5  Score=41.20  Aligned_cols=54  Identities=9%  Similarity=-0.079  Sum_probs=40.9

Q ss_pred             EEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCC
Q 028478            8 NLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGA   72 (208)
Q Consensus         8 ~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~   72 (208)
                      ++|++||.......           .....|+.+|.+.+.+.+.++.++  .++.++.+.|+.+-.+
T Consensus       135 ~iv~isS~~~~~~~-----------~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~  190 (520)
T PRK06484        135 AIVNVASGAGLVAL-----------PKRTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQ  190 (520)
T ss_pred             eEEEECCcccCCCC-----------CCCchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCch
Confidence            89999986544211           124579999999999998887654  2789999999988665

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=93.32  E-value=1.8  Score=32.62  Aligned_cols=116  Identities=12%  Similarity=0.022  Sum_probs=73.0

Q ss_pred             ccCCCCEEEEeccc-cccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCC
Q 028478            2 AAHGCKNLVFSSSA-TVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         2 ~~~~vk~~i~~SS~-~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      +.++++|++.++.. +.|-...  .--.++|..|...|+.++..+|.+ ..+..+. .++|+.+-|+..|-|+.+.    
T Consensus        93 ~~agv~RllVVGGAGSL~id~g--~rLvD~p~fP~ey~~~A~~~ae~L-~~Lr~~~-~l~WTfvSPaa~f~PGerT----  164 (211)
T COG2910          93 KGAGVPRLLVVGGAGSLEIDEG--TRLVDTPDFPAEYKPEALAQAEFL-DSLRAEK-SLDWTFVSPAAFFEPGERT----  164 (211)
T ss_pred             hhcCCeeEEEEcCccceEEcCC--ceeecCCCCchhHHHHHHHHHHHH-HHHhhcc-CcceEEeCcHHhcCCcccc----
Confidence            34688898888753 2332111  122355667777888888888843 4444555 7999999999999985321    


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEe
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNL  151 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni  151 (208)
                        +           +...|+. .+..-.      .|   -++|...|.|-+++.-++++   ....+.|-+
T Consensus       165 --g-----------~yrlggD-~ll~n~------~G---~SrIS~aDYAiA~lDe~E~~---~h~rqRftv  209 (211)
T COG2910         165 --G-----------NYRLGGD-QLLVNA------KG---ESRISYADYAIAVLDELEKP---QHIRQRFTV  209 (211)
T ss_pred             --C-----------ceEeccc-eEEEcC------CC---ceeeeHHHHHHHHHHHHhcc---cccceeeee
Confidence              1           1112332 333322      23   35799999999999999985   344466544

>PRK05855 short chain dehydrogenase; Validated

Probab=93.26  E-value=0.22  Score=43.72  Aligned_cols=55  Identities=11%  Similarity=0.024  Sum_probs=42.7

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGA   72 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~   72 (208)
                      .+||++||...+...           .....|+.+|.+.+.+.+.++.+.  .++.++++.||.|-.+
T Consensus       445 g~iv~~sS~~~~~~~-----------~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~  501 (582)
T PRK05855        445 GHIVNVASAAAYAPS-----------RSLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTN  501 (582)
T ss_pred             cEEEEECChhhccCC-----------CCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCccc
Confidence            389999998877532           235689999999998888776543  2799999999988664

>PRK05693 short chain dehydrogenase; Provisional

Probab=93.17  E-value=0.32  Score=38.53  Aligned_cols=54  Identities=7%  Similarity=-0.082  Sum_probs=40.5

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhc---CCCccEEEEecccccCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRS---DSEWKIILLRYFNPVGA   72 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~iiR~~~i~G~   72 (208)
                      .++|++||...+..           ......|+.+|.+.+.+.+.++.+   + ++.+++++||.+..+
T Consensus       123 g~iv~isS~~~~~~-----------~~~~~~Y~~sK~al~~~~~~l~~e~~~~-gi~v~~v~pg~v~t~  179 (274)
T PRK05693        123 GLVVNIGSVSGVLV-----------TPFAGAYCASKAAVHALSDALRLELAPF-GVQVMEVQPGAIASQ  179 (274)
T ss_pred             CEEEEECCccccCC-----------CCCccHHHHHHHHHHHHHHHHHHHhhhh-CeEEEEEecCccccc
Confidence            47888888544321           112467999999999988877654   4 899999999999775

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=93.15  E-value=1.6  Score=34.38  Aligned_cols=111  Identities=16%  Similarity=0.097  Sum_probs=66.2

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      .++|++||.....           +......|+.+|.+.+.+.+.++.+.  .++.+..+.||.+-.+..+.        
T Consensus       140 g~Iv~iss~~~~~-----------~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~--------  200 (261)
T PRK08690        140 SAIVALSYLGAVR-----------AIPNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASG--------  200 (261)
T ss_pred             cEEEEEccccccc-----------CCCCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhc--------
Confidence            3788888754431           11234679999999999888776543  17999999999887642110        


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                      ... ........ .... |+               .-+...+|+|+++..++.... ....++.+-+.+|.
T Consensus       201 ~~~-~~~~~~~~-~~~~-p~---------------~r~~~peevA~~v~~l~s~~~-~~~tG~~i~vdgG~  252 (261)
T PRK08690        201 IAD-FGKLLGHV-AAHN-PL---------------RRNVTIEEVGNTAAFLLSDLS-SGITGEITYVDGGY  252 (261)
T ss_pred             CCc-hHHHHHHH-hhcC-CC---------------CCCCCHHHHHHHHHHHhCccc-CCcceeEEEEcCCc
Confidence            000 00111111 1110 11               125678999999999998632 23456777665554

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=92.94  E-value=2.1  Score=33.67  Aligned_cols=111  Identities=15%  Similarity=0.073  Sum_probs=66.2

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      .++|++||....-           +......|+.+|.+.+.+.+.++.++  .++.+..+.||.+-.+....   ..   
T Consensus       139 g~Ii~iss~~~~~-----------~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~---~~---  201 (260)
T PRK06997        139 ASLLTLSYLGAER-----------VVPNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASG---IK---  201 (260)
T ss_pred             ceEEEEecccccc-----------CCCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhcc---cc---
Confidence            3788888854321           11224579999999999999887653  27899999998886542110   00   


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                         ..-...... .... ++               .-+...+|+|+++..++... .....++++.+.++.
T Consensus       202 ---~~~~~~~~~-~~~~-p~---------------~r~~~pedva~~~~~l~s~~-~~~itG~~i~vdgg~  251 (260)
T PRK06997        202 ---DFGKILDFV-ESNA-PL---------------RRNVTIEEVGNVAAFLLSDL-ASGVTGEITHVDSGF  251 (260)
T ss_pred             ---chhhHHHHH-HhcC-cc---------------cccCCHHHHHHHHHHHhCcc-ccCcceeEEEEcCCh
Confidence               000111111 1110 11               12567899999999998763 223556777775543

>PRK05884 short chain dehydrogenase; Provisional

Probab=92.84  E-value=1.2  Score=34.15  Aligned_cols=92  Identities=9%  Similarity=-0.056  Sum_probs=60.2

Q ss_pred             EEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCCC
Q 028478            8 NLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRGI   85 (208)
Q Consensus         8 ~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~~   85 (208)
                      ++|++||.. .              .....|+.+|.+.+.+.+.++.++  .++.+..+.||.+-.+             
T Consensus       125 ~Iv~isS~~-~--------------~~~~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~-------------  176 (223)
T PRK05884        125 SIISVVPEN-P--------------PAGSAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQP-------------  176 (223)
T ss_pred             eEEEEecCC-C--------------CCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCch-------------
Confidence            788888853 0              123579999999999999887754  2788999999877543             


Q ss_pred             CCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           86 PNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                            .....  ..              .+     ....+|+++++..++... .....++++.+.+|.
T Consensus       177 ------~~~~~--~~--------------~p-----~~~~~~ia~~~~~l~s~~-~~~v~G~~i~vdgg~  218 (223)
T PRK05884        177 ------GYDGL--SR--------------TP-----PPVAAEIARLALFLTTPA-ARHITGQTLHVSHGA  218 (223)
T ss_pred             ------hhhhc--cC--------------CC-----CCCHHHHHHHHHHHcCch-hhccCCcEEEeCCCe
Confidence                  11000  00              01     126799999999987652 223556777665543

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=92.76  E-value=1.3  Score=33.97  Aligned_cols=104  Identities=8%  Similarity=-0.008  Sum_probs=62.2

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC----CCccEEEEecccccCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD----SEWKIILLRYFNPVGAHPSGKIG   79 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~iiR~~~i~G~~~~~~~~   79 (208)
                      .+..+++++||..  +..     .+ .+..+...|+.+|...+.+.+.++.+.    .++.+..+.||.+-.+..     
T Consensus       122 ~~~~~i~~iss~~--~~~-----~~-~~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~-----  188 (235)
T PRK09009        122 SESAKFAVISAKV--GSI-----SD-NRLGGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALS-----  188 (235)
T ss_pred             cCCceEEEEeecc--ccc-----cc-CCCCCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCC-----
Confidence            3445788887632  210     00 112345689999999999999887542    267888889888766420     


Q ss_pred             CCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEec
Q 028478           80 EDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLG  152 (208)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~  152 (208)
                                    ..... .   .+             ...++..+|+|++++.++....+ ...+..+.+.
T Consensus       189 --------------~~~~~-~---~~-------------~~~~~~~~~~a~~~~~l~~~~~~-~~~g~~~~~~  229 (235)
T PRK09009        189 --------------KPFQQ-N---VP-------------KGKLFTPEYVAQCLLGIIANATP-AQSGSFLAYD  229 (235)
T ss_pred             --------------cchhh-c---cc-------------cCCCCCHHHHHHHHHHHHHcCCh-hhCCcEEeeC
Confidence                          00001 1   01             11256889999999999987321 2344555443

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=92.69  E-value=0.32  Score=38.16  Aligned_cols=55  Identities=9%  Similarity=-0.054  Sum_probs=41.2

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGA   72 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~   72 (208)
                      .++|++||...+..           ......|+.+|.+.+.+.+.++.+.  .++.+..+.||.+-.+
T Consensus       144 ~~iv~isS~~~~~~-----------~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~  200 (256)
T TIGR01500       144 RTVVNISSLCAIQP-----------FKGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTD  200 (256)
T ss_pred             CEEEEECCHHhCCC-----------CCCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccch
Confidence            47999999755421           1234679999999999999887654  3789999999888654

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=92.66  E-value=0.35  Score=38.02  Aligned_cols=55  Identities=7%  Similarity=-0.071  Sum_probs=41.0

Q ss_pred             EEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC-CCccEEEEecccccCCC
Q 028478            8 NLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD-SEWKIILLRYFNPVGAH   73 (208)
Q Consensus         8 ~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~iiR~~~i~G~~   73 (208)
                      ++|++||...+-.           ......|+.+|.+.+.+.+.++.++ +.+.+..+.||.+..+.
T Consensus       136 ~iv~~sS~~~~~~-----------~~~~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~  191 (262)
T TIGR03325       136 SVIFTISNAGFYP-----------NGGGPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDL  191 (262)
T ss_pred             CEEEEeccceecC-----------CCCCchhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCC
Confidence            6788777544311           1124579999999999999998876 45889999999988753

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=92.56  E-value=2.7  Score=33.38  Aligned_cols=110  Identities=12%  Similarity=0.088  Sum_probs=65.7

Q ss_pred             EEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCCC
Q 028478            8 NLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRGI   85 (208)
Q Consensus         8 ~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~~   85 (208)
                      ++|++||.....           +......|+.+|.+.+.+.+.++.++  -++.+..+.||.+-.+...        ..
T Consensus       140 ~Iv~isS~~~~~-----------~~~~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~--------~~  200 (271)
T PRK06505        140 SMLTLTYGGSTR-----------VMPNYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGA--------GI  200 (271)
T ss_pred             eEEEEcCCCccc-----------cCCccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccc--------cC
Confidence            788888854321           11124579999999999998887754  1799999999988765211        00


Q ss_pred             CCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           86 PNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                      ..  ............ ++               .-+...+|+|++++.++... .....++.+.+.++.
T Consensus       201 ~~--~~~~~~~~~~~~-p~---------------~r~~~peeva~~~~fL~s~~-~~~itG~~i~vdgG~  251 (271)
T PRK06505        201 GD--ARAIFSYQQRNS-PL---------------RRTVTIDEVGGSALYLLSDL-SSGVTGEIHFVDSGY  251 (271)
T ss_pred             cc--hHHHHHHHhhcC-Cc---------------cccCCHHHHHHHHHHHhCcc-ccccCceEEeecCCc
Confidence            00  001111111110 11               11456799999999988752 223456777776554

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=92.23  E-value=2.2  Score=33.46  Aligned_cols=109  Identities=14%  Similarity=0.094  Sum_probs=64.8

Q ss_pred             EEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCCC
Q 028478            8 NLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRGI   85 (208)
Q Consensus         8 ~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~~   85 (208)
                      ++|++||.....           +......|+.+|.+.+.+.+.++.+.  .++.+..+.||.+-.+..+..        
T Consensus       143 ~Ii~iss~~~~~-----------~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~--------  203 (258)
T PRK07533        143 SLLTMSYYGAEK-----------VVENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGI--------  203 (258)
T ss_pred             EEEEEecccccc-----------CCccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhcc--------
Confidence            688888753221           11224579999999999998877653  278999999998866421100        


Q ss_pred             CCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCC
Q 028478           86 PNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTG  154 (208)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~  154 (208)
                       ............ .   .++             .-+...+|+|.+++.++... .....|+.+.+.++
T Consensus       204 -~~~~~~~~~~~~-~---~p~-------------~r~~~p~dva~~~~~L~s~~-~~~itG~~i~vdgg  253 (258)
T PRK07533        204 -DDFDALLEDAAE-R---APL-------------RRLVDIDDVGAVAAFLASDA-ARRLTGNTLYIDGG  253 (258)
T ss_pred             -CCcHHHHHHHHh-c---CCc-------------CCCCCHHHHHHHHHHHhChh-hccccCcEEeeCCc
Confidence             001112222211 1   111             12567899999999998752 22355677766544

>PRK06953 short chain dehydrogenase; Provisional

Probab=92.20  E-value=0.45  Score=36.39  Aligned_cols=56  Identities=16%  Similarity=-0.064  Sum_probs=40.6

Q ss_pred             EEEEeccc-cccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCC
Q 028478            8 NLVFSSSA-TVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGA   72 (208)
Q Consensus         8 ~~i~~SS~-~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~   72 (208)
                      +++++||. ..++...         ..+...|+.+|...+.+++.+..+++++.+..++|+.+..+
T Consensus       124 ~iv~isS~~~~~~~~~---------~~~~~~Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~  180 (222)
T PRK06953        124 VLAVLSSRMGSIGDAT---------GTTGWLYRASKAALNDALRAASLQARHATCIALHPGWVRTD  180 (222)
T ss_pred             eEEEEcCccccccccc---------CCCccccHHhHHHHHHHHHHHhhhccCcEEEEECCCeeecC
Confidence            68888875 3444211         11224699999999999999877665788999999887764

>PLN02780 ketoreductase/ oxidoreductase

Probab=92.16  E-value=0.32  Score=39.86  Aligned_cols=60  Identities=13%  Similarity=0.046  Sum_probs=43.5

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGA   72 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~   72 (208)
                      .+..++|++||...+....         ......|+.||.+.+.+.+.++.+.  .++.+.++.||.+-.+
T Consensus       183 ~~~g~IV~iSS~a~~~~~~---------~p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~  244 (320)
T PLN02780        183 RKKGAIINIGSGAAIVIPS---------DPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATK  244 (320)
T ss_pred             cCCcEEEEEechhhccCCC---------CccchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecC
Confidence            4455899999976542100         0124689999999999998887654  2799999999888664

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=92.07  E-value=0.86  Score=36.34  Aligned_cols=110  Identities=12%  Similarity=0.082  Sum_probs=64.9

Q ss_pred             EEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCCC
Q 028478            8 NLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRGI   85 (208)
Q Consensus         8 ~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~~   85 (208)
                      ++|++||.....           +......|+.+|.+.+.+.+.++.+.  .++.+..+-||.|-.+....        .
T Consensus       138 ~Iv~isS~~~~~-----------~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~--------~  198 (274)
T PRK08415        138 SVLTLSYLGGVK-----------YVPHYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASG--------I  198 (274)
T ss_pred             cEEEEecCCCcc-----------CCCcchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhc--------c
Confidence            788998853221           11124579999999999999887653  27899999999887642100        0


Q ss_pred             CCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           86 PNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                       ...- .........   .++             .-+...+|+|++++.++.... ....++.+.+.+|.
T Consensus       199 -~~~~-~~~~~~~~~---~pl-------------~r~~~pedva~~v~fL~s~~~-~~itG~~i~vdGG~  249 (274)
T PRK08415        199 -GDFR-MILKWNEIN---APL-------------KKNVSIEEVGNSGMYLLSDLS-SGVTGEIHYVDAGY  249 (274)
T ss_pred             -chhh-HHhhhhhhh---Cch-------------hccCCHHHHHHHHHHHhhhhh-hcccccEEEEcCcc
Confidence             0000 000110111   111             124678999999999987521 23456777676554

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=92.02  E-value=2.9  Score=33.09  Aligned_cols=110  Identities=15%  Similarity=0.122  Sum_probs=65.4

Q ss_pred             EEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCCC
Q 028478            8 NLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRGI   85 (208)
Q Consensus         8 ~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~~   85 (208)
                      ++|++||.....           +......|+.+|.+.+.+.+.++.+.  .++.+..+-||.+-.+...        ..
T Consensus       140 ~Iv~iss~~~~~-----------~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~--------~~  200 (262)
T PRK07984        140 ALLTLSYLGAER-----------AIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAAS--------GI  200 (262)
T ss_pred             EEEEEecCCCCC-----------CCCCcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHh--------cC
Confidence            688888754321           11124579999999999999887753  2789999999888654110        00


Q ss_pred             CCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           86 PNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                       .......... ...   .+             ..-+...+|+|.+++.++.... ....++.+.+.++.
T Consensus       201 -~~~~~~~~~~-~~~---~p-------------~~r~~~pedva~~~~~L~s~~~-~~itG~~i~vdgg~  251 (262)
T PRK07984        201 -KDFRKMLAHC-EAV---TP-------------IRRTVTIEDVGNSAAFLCSDLS-AGISGEVVHVDGGF  251 (262)
T ss_pred             -CchHHHHHHH-HHc---CC-------------CcCCCCHHHHHHHHHHHcCccc-ccccCcEEEECCCc
Confidence             0011111111 111   11             1125678999999999987632 23556777666553

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=91.88  E-value=1.1  Score=35.61  Aligned_cols=111  Identities=12%  Similarity=0.100  Sum_probs=66.2

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      .++|++||.....           +......|+.+|.+.+.+.+.++.++  .++.+..+.||.+-.+..+.   .    
T Consensus       142 g~Iv~iss~~~~~-----------~~p~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~---~----  203 (272)
T PRK08159        142 GSILTLTYYGAEK-----------VMPHYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASG---I----  203 (272)
T ss_pred             ceEEEEecccccc-----------CCCcchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhc---C----
Confidence            3788888753221           11224579999999999998887654  26899999998886642110   0    


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                        ... ..+.......   .++             .-+...+|+|++++.++... .....++.+.+.++.
T Consensus       204 --~~~-~~~~~~~~~~---~p~-------------~r~~~peevA~~~~~L~s~~-~~~itG~~i~vdgG~  254 (272)
T PRK08159        204 --GDF-RYILKWNEYN---APL-------------RRTVTIEEVGDSALYLLSDL-SRGVTGEVHHVDSGY  254 (272)
T ss_pred             --Ccc-hHHHHHHHhC---Ccc-------------cccCCHHHHHHHHHHHhCcc-ccCccceEEEECCCc
Confidence              000 0111111111   111             12467899999999998753 223566777777664

>PRK07832 short chain dehydrogenase; Provisional

Probab=91.87  E-value=0.55  Score=37.19  Aligned_cols=56  Identities=14%  Similarity=-0.051  Sum_probs=39.7

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAH   73 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~   73 (208)
                      .++|++||...+..           ......|+.+|.+.+.+.+..+.+.  .++++++++||.+.++.
T Consensus       131 g~ii~isS~~~~~~-----------~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~  188 (272)
T PRK07832        131 GHLVNVSSAAGLVA-----------LPWHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPL  188 (272)
T ss_pred             cEEEEEccccccCC-----------CCCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcc
Confidence            48999998643321           1124579999998887776665331  28999999999999863

>PRK08177 short chain dehydrogenase; Provisional

Probab=91.28  E-value=0.8  Score=35.06  Aligned_cols=58  Identities=16%  Similarity=0.052  Sum_probs=39.9

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGA   72 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~   72 (208)
                      ..++++||.  +|....      .+..+...|+.+|.+.+.+++.++.++  .++.+..++||.+-.+
T Consensus       124 ~~iv~~ss~--~g~~~~------~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~  183 (225)
T PRK08177        124 GVLAFMSSQ--LGSVEL------PDGGEMPLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTD  183 (225)
T ss_pred             CEEEEEccC--cccccc------CCCCCccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecC
Confidence            367778764  332110      111234579999999999999887654  3688999999888664

>PF08732 HIM1: HIM1; InterPro: IPR014843 HIM1 (high induction of mutagenesis protein 1) plays a role in the control of spontaneous and induced mutagenesis []

Probab=91.15  E-value=1.6  Score=36.63  Aligned_cols=60  Identities=28%  Similarity=0.315  Sum_probs=44.5

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPS   75 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~   75 (208)
                      +.+.|++|.++|   +++         .......+|-..|..-|+-+.+...-. --..+|+|||-+.|.+.+
T Consensus       246 ~~~~K~~vIvTS---fn~---------~~~s~~f~Yfk~K~~LE~dl~~~l~~~-l~~lvILRPGplvG~h~~  305 (410)
T PF08732_consen  246 NTGNKKLVIVTS---FNN---------NAISSMFPYFKTKGELENDLQNLLPPK-LKHLVILRPGPLVGEHGS  305 (410)
T ss_pred             cCCCceEEEEEe---cCc---------chhhhhhhhhHHHHHHHHHHHhhcccc-cceEEEecCccccCCCCC
Confidence            567889999888   332         122345789999999999998765421 237899999999998754

It is thought to participate in the control of processing of mutational intermediates appearing during error-prone bypass of DNA damage.

>PRK06940 short chain dehydrogenase; Provisional

Probab=89.51  E-value=3  Score=33.12  Aligned_cols=97  Identities=6%  Similarity=-0.174  Sum_probs=57.7

Q ss_pred             CCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCeeEEEcccc
Q 028478           34 AMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDY  111 (208)
Q Consensus        34 p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  111 (208)
                      +...|+.||.+.+.+.+.++.++  .++.+..+.||.+-.+.....+    .   ..-......... .. ++       
T Consensus       165 ~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~----~---~~~~~~~~~~~~-~~-p~-------  228 (275)
T PRK06940        165 SLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDEL----N---GPRGDGYRNMFA-KS-PA-------  228 (275)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhh----c---CCchHHHHHHhh-hC-Cc-------
Confidence            35689999999999888776543  2799999999988775311000    0   000001111111 10 11       


Q ss_pred             CCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478          112 STKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus       112 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                              .-+...+|+|+++..++... .....|+.+.+.++.
T Consensus       229 --------~r~~~peeia~~~~fL~s~~-~~~itG~~i~vdgg~  263 (275)
T PRK06940        229 --------GRPGTPDEIAALAEFLMGPR-GSFITGSDFLVDGGA  263 (275)
T ss_pred             --------ccCCCHHHHHHHHHHHcCcc-cCcccCceEEEcCCe
Confidence                    12567899999999988652 223455777666553

>PRK05599 hypothetical protein; Provisional

Probab=88.63  E-value=1.3  Score=34.54  Aligned_cols=55  Identities=25%  Similarity=0.253  Sum_probs=39.7

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGA   72 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~   72 (208)
                      .++|++||...+-.           ......|+.+|.+.+.+.+.++.+.  .++.+..+.||.+..+
T Consensus       130 g~Iv~isS~~~~~~-----------~~~~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~  186 (246)
T PRK05599        130 AAIVAFSSIAGWRA-----------RRANYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGS  186 (246)
T ss_pred             CEEEEEeccccccC-----------CcCCcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccch
Confidence            37999998644311           1124579999999999888877653  2688888888877764

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=88.61  E-value=6.6  Score=33.64  Aligned_cols=54  Identities=11%  Similarity=-0.117  Sum_probs=38.3

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVG   71 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G   71 (208)
                      .+||++||...+...           .....|+.+|...+.+++.++.+.  .++.+..+.|+.+-.
T Consensus       336 g~iv~~SS~~~~~g~-----------~~~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t  391 (450)
T PRK08261        336 GRIVGVSSISGIAGN-----------RGQTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIET  391 (450)
T ss_pred             CEEEEECChhhcCCC-----------CCChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcc
Confidence            589999986544211           124689999998888877765532  278999999987654

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=88.60  E-value=0.74  Score=35.78  Aligned_cols=55  Identities=13%  Similarity=0.022  Sum_probs=41.1

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCC-CccEEEEecccccCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDS-EWKIILLRYFNPVGA   72 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-~~~~~iiR~~~i~G~   72 (208)
                      +.+|++||.+.-           .|...+..|+.+|++-+.+.+..+.+-| +..+..++||.+=-+
T Consensus       138 ~~vVnvSS~aav-----------~p~~~wa~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~  193 (253)
T KOG1204|consen  138 GNVVNVSSLAAV-----------RPFSSWAAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQ  193 (253)
T ss_pred             CeEEEecchhhh-----------ccccHHHHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccch
Confidence            467888885543           2344567899999999999999887765 778888888776554

>PLN00015 protochlorophyllide reductase

Probab=87.96  E-value=1.5  Score=35.51  Aligned_cols=39  Identities=13%  Similarity=0.038  Sum_probs=29.6

Q ss_pred             CCCChHHHhHHHHHHHHHHHhhcC---CCccEEEEecccccC
Q 028478           33 EAMNPYGRTKLFIEEICRDVHRSD---SEWKIILLRYFNPVG   71 (208)
Q Consensus        33 ~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~iiR~~~i~G   71 (208)
                      .+...|+.||.+.+.+.+.+++++   .++.++.+.||.|..
T Consensus       180 ~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~  221 (308)
T PLN00015        180 DGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIAT  221 (308)
T ss_pred             cHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccC
Confidence            345679999999776666666543   278999999999964

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=87.31  E-value=9  Score=29.99  Aligned_cols=94  Identities=17%  Similarity=0.100  Sum_probs=56.2

Q ss_pred             CChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCeeEEEccccC
Q 028478           35 MNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYS  112 (208)
Q Consensus        35 ~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  112 (208)
                      ...|+.+|...+.+.+.++.+.  .++.+..+.||.+-.+.....        .. . .-......... ++        
T Consensus       155 ~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~--------~~-~-~~~~~~~~~~~-p~--------  215 (256)
T PRK07889        155 YDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAI--------PG-F-ELLEEGWDERA-PL--------  215 (256)
T ss_pred             cchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcc--------cC-c-HHHHHHHHhcC-cc--------
Confidence            4568999999999998877653  278999999998876421100        00 0 01111111110 11        


Q ss_pred             CCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCC
Q 028478          113 TKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTG  154 (208)
Q Consensus       113 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~  154 (208)
                            .+.+...+|+|++++.++.... ....++++.+.++
T Consensus       216 ------~~~~~~p~evA~~v~~l~s~~~-~~~tG~~i~vdgg  250 (256)
T PRK07889        216 ------GWDVKDPTPVARAVVALLSDWF-PATTGEIVHVDGG  250 (256)
T ss_pred             ------ccccCCHHHHHHHHHHHhCccc-ccccceEEEEcCc
Confidence                  1125678999999999987632 2345567766544

>PRK08862 short chain dehydrogenase; Provisional

Probab=84.22  E-value=2.9  Score=32.30  Aligned_cols=52  Identities=4%  Similarity=-0.146  Sum_probs=38.7

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGA   72 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~   72 (208)
                      ..+|++||...+              .+...|+.+|.+.+.+.+.++.+.  .++.+..+.||.+-..
T Consensus       137 g~Iv~isS~~~~--------------~~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~  190 (227)
T PRK08862        137 GVIVNVISHDDH--------------QDLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSAN  190 (227)
T ss_pred             ceEEEEecCCCC--------------CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence            378888884322              124579999999999988877653  2799999999877664

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=81.52  E-value=7.9  Score=30.92  Aligned_cols=91  Identities=18%  Similarity=0.129  Sum_probs=59.6

Q ss_pred             CCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCC
Q 028478            5 GCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDP   82 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~   82 (208)
                      +--++|.++|..-+-+           ..-...|+.||...-.+.+..+.+.  .|+.++.+-||-+..+          
T Consensus       134 ~~G~IiNI~S~ag~~p-----------~p~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~----------  192 (265)
T COG0300         134 GAGHIINIGSAAGLIP-----------TPYMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTE----------  192 (265)
T ss_pred             CCceEEEEechhhcCC-----------CcchHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCccccc----------
Confidence            3337999999766632           2225689999998877776665543  2799999999877765          


Q ss_pred             CCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhh
Q 028478           83 RGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHK  138 (208)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  138 (208)
                               +.. . .+.  ....         ....+-++..+|+|+..+.++.+
T Consensus       193 ---------f~~-~-~~~--~~~~---------~~~~~~~~~~~~va~~~~~~l~~  226 (265)
T COG0300         193 ---------FFD-A-KGS--DVYL---------LSPGELVLSPEDVAEAALKALEK  226 (265)
T ss_pred             ---------ccc-c-ccc--cccc---------ccchhhccCHHHHHHHHHHHHhc
Confidence                     111 0 111  0110         11124578999999999999998

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	208
1hzj_A	348	Human Udp-Galactose 4-Epimerase: Accommodation Of U		7e-65
1i3k_A	348	Molecular Basis For Severe Epimerase-Deficiency Gal		7e-65
1ek5_A	348	Structure Of Human Udp-Galactose 4-Epimerase In Com		2e-64
3enk_A	341	1.9a Crystal Structure Of Udp-Glucose 4-Epimerase F		2e-59
2udp_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		2e-57
1lrj_A	338	Crystal Structure Of E. Coli Udp-Galactose 4-Epimer		2e-57
1lrk_A	338	Crystal Structure Of Escherichia Coli Udp-Galactose		2e-57
1kvr_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		4e-57
1kvs_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		4e-57
1kvq_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		5e-57
1kvu_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		5e-57
1a9y_A	338	Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEX		1e-56
1kvt_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		1e-56
1a9z_A	338	Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEX		1e-56
1z45_A	699	Crystal Structure Of The Gal10 Fusion Protein Galac		2e-52
2c20_A	330	Crystal Structure Of Udp-Glucose 4-Epimerase Length		4e-27
1gy8_A	397	Trypanosoma Brucei Udp-Galactose 4' Epimerase Lengt		9e-24
2p5u_A	311	Crystal Structure Of Thermus Thermophilus Hb8 Udp-G		1e-09
3vps_A	321	Structure Of A Novel Nad Dependent-Ndp-Hexosamine 5		8e-08
3aw9_A	308	Structure Of Udp-Galactose 4-Epimerase Mutant Lengt		2e-07
3icp_A	312	Crystal Structure Of Udp-Galactose 4-Epimerase Leng		2e-07
4id9_A	347	Crystal Structure Of A Short-Chain DehydrogenaseRED		1e-06
3ruc_A	351	Specific Recognition Of N-Acetylated Substrates And		2e-06
3lu1_A	364	Crystal Structure Analysis Of Wbgu: A Udp-Galnac 4-		2e-06
3ru9_A	351	Specific Recognition Of N-Acetylated Substrates And		2e-06
3ru7_A	351	Specific Recognition Of N-Acetylated Substrates And		2e-06
3ehe_A	313	Crystal Structure Of Udp-Glucose 4 Epimerase (Gale-		7e-06
4egb_A	346	3.0 Angstrom Resolution Crystal Structure Of Dtdp-G		1e-05
1sb8_A	352	Crystal Structure Of Pseudomonas Aeruginosa Udp-N-A		4e-05

>pdb|1HZJ|A Chain A, Human Udp-Galactose 4-Epimerase: Accommodation Of Udp-N- Acetylglucosamine Within The Active Site Length = 348

Iteration: 1
 Score =  243 bits (619), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 116/173 (67%), Positives = 136/173 (78%), Gaps = 2/173 (1%)
Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEA-MNPYGRTKLFIEEICRDVHRSDSEW 59
           M AHG KNLVFSSSATVYG P+ +P  E  P     NPYG++K FIEE+ RD+ ++D  W
Sbjct: 119 MKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTW 178
Query: 60  KIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGV 119
            ++LLRYFNP GAH SG IGEDP+GIPNNLMP+V+QVA+GRR  L VFG DY T+DGTGV
Sbjct: 179 NVVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGV 238
Query: 120 RDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           RDYIHV+DLA GHIAAL KL + + GC +YNLGTG G SVL+MV A EKASGK
Sbjct: 239 RDYIHVVDLAKGHIAALRKLKE-QCGCRIYNLGTGTGYSVLQMVQAMEKASGK 290

>pdb|1I3K|A Chain A, Molecular Basis For Severe Epimerase-Deficiency Galactosemia: X-Ray Structure Of The Human V94m- Substituted Udp-Galactose 4-Epimerase Length = 348

Iteration: 1
 Score =  243 bits (619), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 116/173 (67%), Positives = 136/173 (78%), Gaps = 2/173 (1%)
Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEA-MNPYGRTKLFIEEICRDVHRSDSEW 59
           M AHG KNLVFSSSATVYG P+ +P  E  P     NPYG++K FIEE+ RD+ ++D  W
Sbjct: 119 MKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTW 178
Query: 60  KIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGV 119
            ++LLRYFNP GAH SG IGEDP+GIPNNLMP+V+QVA+GRR  L VFG DY T+DGTGV
Sbjct: 179 NVVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGV 238
Query: 120 RDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           RDYIHV+DLA GHIAAL KL + + GC +YNLGTG G SVL+MV A EKASGK
Sbjct: 239 RDYIHVVDLAKGHIAALRKLKE-QCGCRIYNLGTGTGYSVLQMVQAMEKASGK 290

>pdb|1EK5|A Chain A, Structure Of Human Udp-Galactose 4-Epimerase In Complex With Nad+ Length = 348

Iteration: 1
 Score =  241 bits (616), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 116/173 (67%), Positives = 135/173 (78%), Gaps = 2/173 (1%)
Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEA-MNPYGRTKLFIEEICRDVHRSDSEW 59
           M AHG KNLVFSSSATVYG P+ +P  E  P     NPYG++K FIEE+ RD+ ++D  W
Sbjct: 119 MKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTW 178
Query: 60  KIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGV 119
             +LLRYFNP GAH SG IGEDP+GIPNNLMP+V+QVA+GRR  L VFG DY T+DGTGV
Sbjct: 179 NAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGV 238
Query: 120 RDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           RDYIHV+DLA GHIAAL KL + + GC +YNLGTG G SVL+MV A EKASGK
Sbjct: 239 RDYIHVVDLAKGHIAALRKLKE-QCGCRIYNLGTGTGYSVLQMVQAMEKASGK 290

>pdb|3ENK|A Chain A, 1.9a Crystal Structure Of Udp-Glucose 4-Epimerase From Burkholderia Pseudomallei Length = 341

Iteration: 1
 Score =  224 bits (572), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 112/180 (62%), Positives = 129/180 (71%), Gaps = 1/180 (0%)
Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
           M     K +VFSSSATVYG P+  P  E FPL A NPYG+TKL  E+I RDV  +D  W+
Sbjct: 116 MRERAVKRIVFSSSATVYGVPERSPIDETFPLSATNPYGQTKLMAEQILRDVEAADPSWR 175
Query: 61  IILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVR 120
           +  LRYFNPVGAH SG IGEDP GIPNNLMP+V QVAVG+  +L VFG+DY T DGTGVR
Sbjct: 176 VATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVR 235
Query: 121 DYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKVHIFALFC 180
           DYIHV+DLA GHIAAL  L+       V NLGTG+G SVLE+V AFEKASG+   + L  
Sbjct: 236 DYIHVVDLARGHIAALDALERRDASLTV-NLGTGRGYSVLEVVRAFEKASGRAVPYELVA 294

>pdb|2UDP|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score =  218 bits (555), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 104/173 (60%), Positives = 128/173 (73%), Gaps = 2/173 (1%)
Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPL-EAMNPYGRTKLFIEEICRDVHRSDSEW 59
           M A   KN +FSSSATVYG    +P  E FP     +PYG++KL +E+I  D+ ++  +W
Sbjct: 111 MRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDW 170
Query: 60  KIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGV 119
            I LLRYFNPVGAHPSG +GEDP+GIPNNLMP++ QVAVGRR  L +FG DY T+DGTGV
Sbjct: 171 SIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGV 230
Query: 120 RDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           RDYIHV+DLADGH+ A+ KL + K G  +YNLG G G SVL++V AF KA GK
Sbjct: 231 RDYIHVMDLADGHVVAMEKLAN-KPGVHIYNLGAGVGNSVLDVVNAFSKACGK 282

>pdb|1LRJ|A Chain A, Crystal Structure Of E. Coli Udp-Galactose 4-Epimerase Complexed With Udp-N-Acetylglucosamine Length = 338

Iteration: 1
 Score =  218 bits (555), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 104/173 (60%), Positives = 128/173 (73%), Gaps = 2/173 (1%)
Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPL-EAMNPYGRTKLFIEEICRDVHRSDSEW 59
           M A   KN +FSSSATVYG    +P  E FP     +PYG++KL +E+I  D+ ++  +W
Sbjct: 111 MRAANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDW 170
Query: 60  KIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGV 119
            I LLRYFNPVGAHPSG +GEDP+GIPNNLMP++ QVAVGRR  L +FG DY T+DGTGV
Sbjct: 171 SIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGV 230
Query: 120 RDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           RDYIHV+DLADGH+ A+ KL + K G  +YNLG G G SVL++V AF KA GK
Sbjct: 231 RDYIHVMDLADGHVVAMEKLAN-KPGVHIYNLGAGVGNSVLDVVNAFSKACGK 282

>pdb|1LRK|A Chain A, Crystal Structure Of Escherichia Coli Udp-Galactose 4-Epimerase Mutant Y299c Complexed With Udp-N-Acetylglucosamine Length = 338

Iteration: 1
 Score =  218 bits (554), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 104/173 (60%), Positives = 128/173 (73%), Gaps = 2/173 (1%)
Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPL-EAMNPYGRTKLFIEEICRDVHRSDSEW 59
           M A   KN +FSSSATVYG    +P  E FP     +PYG++KL +E+I  D+ ++  +W
Sbjct: 111 MRAANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDW 170
Query: 60  KIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGV 119
            I LLRYFNPVGAHPSG +GEDP+GIPNNLMP++ QVAVGRR  L +FG DY T+DGTGV
Sbjct: 171 SIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGV 230
Query: 120 RDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           RDYIHV+DLADGH+ A+ KL + K G  +YNLG G G SVL++V AF KA GK
Sbjct: 231 RDYIHVMDLADGHVVAMEKLAN-KPGVHIYNLGAGVGNSVLDVVNAFSKACGK 282

>pdb|1KVR|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score =  217 bits (553), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 103/173 (59%), Positives = 128/173 (73%), Gaps = 2/173 (1%)
Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPL-EAMNPYGRTKLFIEEICRDVHRSDSEW 59
           M A   KN +FSS+ATVYG    +P  E FP     +PYG++KL +E+I  D+ ++  +W
Sbjct: 111 MRAANVKNFIFSSAATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDW 170
Query: 60  KIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGV 119
            I LLRYFNPVGAHPSG +GEDP+GIPNNLMP++ QVAVGRR  L +FG DY T+DGTGV
Sbjct: 171 SIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGV 230
Query: 120 RDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           RDYIHV+DLADGH+ A+ KL + K G  +YNLG G G SVL++V AF KA GK
Sbjct: 231 RDYIHVMDLADGHVVAMEKLAN-KPGVHIYNLGAGVGNSVLDVVNAFSKACGK 282

>pdb|1KVS|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score =  217 bits (552), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 103/173 (59%), Positives = 128/173 (73%), Gaps = 2/173 (1%)
Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPL-EAMNPYGRTKLFIEEICRDVHRSDSEW 59
           M A   KN +FSS+ATVYG    +P  E FP     +PYG++KL +E+I  D+ ++  +W
Sbjct: 111 MRAANVKNFIFSSTATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDW 170
Query: 60  KIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGV 119
            I LLRYFNPVGAHPSG +GEDP+GIPNNLMP++ QVAVGRR  L +FG DY T+DGTGV
Sbjct: 171 SIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGV 230
Query: 120 RDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           RDYIHV+DLADGH+ A+ KL + K G  +YNLG G G SVL++V AF KA GK
Sbjct: 231 RDYIHVMDLADGHVVAMEKLAN-KPGVHIYNLGAGVGNSVLDVVNAFSKACGK 282

>pdb|1KVQ|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score =  217 bits (552), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 103/173 (59%), Positives = 128/173 (73%), Gaps = 2/173 (1%)
Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPL-EAMNPYGRTKLFIEEICRDVHRSDSEW 59
           M A   KN +FSS+ATVYG    +P  E FP     +PYG++KL +E+I  D+ ++  +W
Sbjct: 111 MRAANVKNFIFSSAATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDW 170
Query: 60  KIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGV 119
            I LLRYFNPVGAHPSG +GEDP+GIPNNLMP++ QVAVGRR  L +FG DY T+DGTGV
Sbjct: 171 SIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGV 230
Query: 120 RDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           RDYIHV+DLADGH+ A+ KL + K G  +YNLG G G SVL++V AF KA GK
Sbjct: 231 RDYIHVMDLADGHVVAMEKLAN-KPGVHIYNLGAGVGNSVLDVVNAFSKACGK 282

>pdb|1KVU|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score =  216 bits (551), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 103/173 (59%), Positives = 128/173 (73%), Gaps = 2/173 (1%)
Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPL-EAMNPYGRTKLFIEEICRDVHRSDSEW 59
           M A   KN +FSSSATVYG    +P  E FP     +P+G++KL +E+I  D+ ++  +W
Sbjct: 111 MRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPFGKSKLMVEQILTDLQKAQPDW 170
Query: 60  KIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGV 119
            I LLRYFNPVGAHPSG +GEDP+GIPNNLMP++ QVAVGRR  L +FG DY T+DGTGV
Sbjct: 171 SIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGV 230
Query: 120 RDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           RDYIHV+DLADGH+ A+ KL + K G  +YNLG G G SVL++V AF KA GK
Sbjct: 231 RDYIHVMDLADGHVVAMEKLAN-KPGVHIYNLGAGVGNSVLDVVNAFSKACGK 282

>pdb|1A9Y|A Chain A, Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEXED WITH UDP- Glucose Length = 338

Iteration: 1
 Score =  215 bits (548), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 102/173 (58%), Positives = 128/173 (73%), Gaps = 2/173 (1%)
Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPL-EAMNPYGRTKLFIEEICRDVHRSDSEW 59
           M A   KN +FSS+ATVYG    +P  E FP     +P+G++KL +E+I  D+ ++  +W
Sbjct: 111 MRAANVKNFIFSSAATVYGDQPKIPYVESFPTGTPQSPFGKSKLMVEQILTDLQKAQPDW 170
Query: 60  KIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGV 119
            I LLRYFNPVGAHPSG +GEDP+GIPNNLMP++ QVAVGRR  L +FG DY T+DGTGV
Sbjct: 171 SIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGV 230
Query: 120 RDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           RDYIHV+DLADGH+ A+ KL + K G  +YNLG G G SVL++V AF KA GK
Sbjct: 231 RDYIHVMDLADGHVVAMEKLAN-KPGVHIYNLGAGVGNSVLDVVNAFSKACGK 282

>pdb|1KVT|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score =  215 bits (548), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 103/173 (59%), Positives = 127/173 (73%), Gaps = 2/173 (1%)
Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPL-EAMNPYGRTKLFIEEICRDVHRSDSEW 59
           M A   KN +FSS ATVYG    +P  E FP     +PYG++KL +E+I  D+ ++  +W
Sbjct: 111 MRAANVKNFIFSSVATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDW 170
Query: 60  KIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGV 119
            I LLRYFNPVGAHPSG +GEDP+GIPNNLMP++ QVAVGRR  L +FG DY T+DGTGV
Sbjct: 171 SIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGV 230
Query: 120 RDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           RDYIHV+DLADGH+ A+ KL + K G  +YNLG G G SVL++V AF KA GK
Sbjct: 231 RDYIHVMDLADGHVVAMEKLAN-KPGVHIYNLGAGVGNSVLDVVNAFSKACGK 282

>pdb|1A9Z|A Chain A, Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEXED WITH UDP- Galactose Length = 338

Iteration: 1
 Score =  215 bits (548), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 102/173 (58%), Positives = 128/173 (73%), Gaps = 2/173 (1%)
Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPL-EAMNPYGRTKLFIEEICRDVHRSDSEW 59
           M A   KN +FSS+ATVYG    +P  E FP     +P+G++KL +E+I  D+ ++  +W
Sbjct: 111 MRAANVKNFIFSSAATVYGDNPKIPYVESFPTGTPQSPFGKSKLMVEQILTDLQKAQPDW 170
Query: 60  KIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGV 119
            I LLRYFNPVGAHPSG +GEDP+GIPNNLMP++ QVAVGRR  L +FG DY T+DGTGV
Sbjct: 171 SIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGV 230
Query: 120 RDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           RDYIHV+DLADGH+ A+ KL + K G  +YNLG G G SVL++V AF KA GK
Sbjct: 231 RDYIHVMDLADGHVVAMEKLAN-KPGVHIYNLGAGVGNSVLDVVNAFSKACGK 282

>pdb|1Z45|A Chain A, Crystal Structure Of The Gal10 Fusion Protein Galactose MutarotaseUDP-Galactose 4-Epimerase From Saccharomyces Cerevisiae Complexed With Nad, Udp-Glucose, And Galactose Length = 699

Iteration: 1
 Score =  201 bits (512), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 101/179 (56%), Positives = 127/179 (70%), Gaps = 8/179 (4%)
Query: 1   MAAHGCKNLVFSSSATVYG----WPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD 56
           M  +     VFSSSATVYG    +P ++P  EE PL   NPYG TK  IE I  D++ SD
Sbjct: 122 MQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSD 181
Query: 57  SE-WKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKD 115
            + WK  +LRYFNP+GAHPSG IGEDP GIPNNL+P++ QVAVGRR +L +FG DY ++D
Sbjct: 182 KKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRD 241
Query: 116 GTGVRDYIHVIDLADGHIAALHKL---DDPKIGCEVYNLGTGKGTSVLEMVAAFEKASG 171
           GT +RDYIHV+DLA GHIAAL  L   ++ +  C  +NLG+GKG++V E+  AF KASG
Sbjct: 242 GTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASG 300

>pdb|2C20|A Chain A, Crystal Structure Of Udp-Glucose 4-Epimerase Length = 330

Iteration: 1
 Score =  117 bits (294), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 70/162 (43%), Positives = 92/162 (56%), Gaps = 3/162 (1%)
Query: 9   LVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFN 68
            +FSS+A  YG   V   TEE      N YG TKL IE++    +   S  +  + RYFN
Sbjct: 113 FIFSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLH-WYSQASNLRYKIFRYFN 171
Query: 69  PVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDL 128
             GA P+G IGED R    +L+P V QVA+G+R ++ +FG DY+T DGT +RDYIHV DL
Sbjct: 172 VAGATPNGIIGEDHRP-ETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDL 230
Query: 129 ADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKAS 170
              H   L  L +     + YNLG G G SV E+V A  + +
Sbjct: 231 VAAHFLGLKDLQNGG-ESDFYNLGNGNGFSVKEIVDAVREVT 271

>pdb|1GY8|A Chain A, Trypanosoma Brucei Udp-Galactose 4' Epimerase Length = 397

Iteration: 1
 Score =  106 bits (264), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 77/197 (39%), Positives = 100/197 (50%), Gaps = 27/197 (13%)
Query: 1   MAAHGCKNLVFSSSATVYGWP---KVVPCTEEFPLEAM----NPYGRTKLFIEEICRDVH 53
           M  H C  ++FSSSA ++G P    V    E   + A     +PYG +KL  E + RD  
Sbjct: 131 MLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCA 190
Query: 54  RSDSEWKIILLRYFNPVGAHPSGKIGEDPRG----IPNNLMPFVTQVAVGRR-------- 101
            +    K I LRYFN  GAH  G IGE  +G    IP  L   ++ +A  +R        
Sbjct: 191 EAYG-IKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHEDAS 249
Query: 102 --PELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAAL---HKL--DDPKIGCEVYNLGTG 154
               + +FGTDY T DGT VRDY+HV DLA  HI AL    KL  +D      V+NLGT 
Sbjct: 250 TDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTS 309
Query: 155 KGTSVLEMVAAFEKASG 171
           +G SV E++    K +G
Sbjct: 310 RGYSVREVIEVARKTTG 326

>pdb|2P5U|A Chain A, Crystal Structure Of Thermus Thermophilus Hb8 Udp-Glucose 4- Epimerase Complex With Nad Length = 311

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 82/172 (47%), Gaps = 18/172 (10%)
Query: 4   HGCKNLVFSSSA-TVYGW-PKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKI 61
           +G + LVF+S+   +YG  P+     E +P    +PY  +K   E     V+      K 
Sbjct: 107 YGVEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFEHYL-SVYGQSYGLKW 165
Query: 62  ILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRD 121
           + LRY N  G        +DP G    +  F  +V  G    +T++       +G  VRD
Sbjct: 166 VSLRYGNVYGPR------QDPHGEAGVVAIFAERVLKGL--PVTLYARKTPGDEGC-VRD 216
Query: 122 YIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKV 173
           Y++V D+A+ H  AL  L+       +YN+GTG+G +  E++ A  +A+GK 
Sbjct: 217 YVYVGDVAEAHALALFSLEG------IYNVGTGEGHTTREVLMAVAEAAGKA 262

>pdb|3VPS|A Chain A, Structure Of A Novel Nad Dependent-Ndp-Hexosamine 5,6-Dehydratase, Tuna, Involved In Tunicamycin Biosynthesis Length = 321

Iteration: 1
 Score = 53.5 bits (127), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 22/171 (12%)
Query: 5   GCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILL 64
           G   +V  S+  VYG    +P  E+ PL   +PY  +K+ +E +     R+    ++ ++
Sbjct: 110 GVPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAASKVGLEMVAGAHQRASVAPEVGIV 169
Query: 65  RYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIH 124
           R+FN  G          P   P+ L+P +    + R  EL V G      DG   RD+ +
Sbjct: 170 RFFNVYG----------PGERPDALVPRLCANLLTRN-ELPVEG------DGEQRRDFTY 212
Query: 125 VIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKVHI 175
           + D+ D  + AL     P     V N G+G+  SV +++   +  S    +
Sbjct: 213 ITDVVD-KLVALANRPLPS----VVNFGSGQSLSVNDVIRILQATSPAAEV 258

>pdb|3AW9|A Chain A, Structure Of Udp-Galactose 4-Epimerase Mutant Length = 308

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 76/164 (46%), Gaps = 23/164 (14%)
Query: 5   GCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILL 64
           G + +VF+SS+TVYG   V+P  EE P + ++ YG  K   E +C    R     + + +
Sbjct: 100 GVRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCATYARLFGV-RCLAV 158
Query: 65  RYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPE-LTVFGTDYSTKDGTGVRDYI 123
           RY N VG          PR     +  F+ ++   R P  L V G      DGT  + Y+
Sbjct: 159 RYANVVG----------PRLRHGVIYDFIMKLR--RNPNVLEVLG------DGTQRKSYL 200
Query: 124 HVIDLADGHIAALHK---LDDPKIGCEVYNLGTGKGTSVLEMVA 164
           +V D  +  +AA  K   +D P +   V N+   +   + ++VA
Sbjct: 201 YVRDAVEATLAAWKKFEEMDAPFLALNVGNVDAVRVLDIAQIVA 244

>pdb|3ICP|A Chain A, Crystal Structure Of Udp-Galactose 4-Epimerase Length = 312

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 76/164 (46%), Gaps = 23/164 (14%)
Query: 5   GCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILL 64
           G + +VF+SS+TVYG   V+P  EE P + ++ YG  K   E +C    R     + + +
Sbjct: 104 GVRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCATYARLFGV-RCLAV 162
Query: 65  RYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPE-LTVFGTDYSTKDGTGVRDYI 123
           RY N VG          PR     +  F+ ++   R P  L V G      DGT  + Y+
Sbjct: 163 RYANVVG----------PRLRHGVIYDFIMKLR--RNPNVLEVLG------DGTQRKSYL 204
Query: 124 HVIDLADGHIAALHK---LDDPKIGCEVYNLGTGKGTSVLEMVA 164
           +V D  +  +AA  K   +D P +   V N+   +   + ++VA
Sbjct: 205 YVRDAVEATLAAWKKFEEMDAPFLALNVGNVDAVRVLDIAQIVA 248

>pdb|4ID9|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE SUPERFAMILY Protein From Agrobacterium Tumefaciens (Target Efi-506441) With Bound Nad, Monoclinic Form 1 Length = 347

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 2   AAHGCKNLVFSSSATVY--GWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEW 59
           +A G +  VF+SS  VY    P+ +P TE+ PL   +PYG TKL  EE+ R  H+     
Sbjct: 114 SAAGVRRFVFASSGEVYPENRPEFLPVTEDHPLCPNSPYGLTKLLGEELVR-FHQRSGAM 172
Query: 60  KIILLRY 66
           + ++LR+
Sbjct: 173 ETVILRF 179

>pdb|3RUC|A Chain A, Specific Recognition Of N-Acetylated Substrates And Domain Flexibility In Wbgu: A Udp-Galnac 4-Epimerase Length = 351

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 23/165 (13%)
Query: 4   HGCKN-----LVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSE 58
           H  KN       +++S++ YG    +P  EE     ++PY  TK ++ EI   V+     
Sbjct: 136 HAAKNAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTK-YVNEIYAQVYARTYG 194
Query: 59  WKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTD-YSTKDGT 117
           +K I LRYFN  G        +DP G    ++P  T   +         G D Y   DG 
Sbjct: 195 FKTIGLRYFNVFGRR------QDPNGAYAAVIPKWTAAMLK--------GDDVYINGDGE 240
Query: 118 GVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEM 162
             RD+ ++ ++   +I +    D  K    +YN+  G  T++ E+
Sbjct: 241 TSRDFCYIDNVIQMNILSALAKDSAK--DNIYNVAVGDRTTLNEL 283

>pdb|3LU1|A Chain A, Crystal Structure Analysis Of Wbgu: A Udp-Galnac 4-Epimerase Length = 364

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 23/165 (13%)
Query: 4   HGCKN-----LVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSE 58
           H  KN       +++S++ YG    +P  EE     ++PY  TK ++ EI   V+     
Sbjct: 149 HAAKNAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTK-YVNEIYAQVYARTYG 207
Query: 59  WKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTD-YSTKDGT 117
           +K I LRYFN  G        +DP G    ++P  T   +         G D Y   DG 
Sbjct: 208 FKTIGLRYFNVFGRR------QDPNGAYAAVIPKWTAAMLK--------GDDVYINGDGE 253
Query: 118 GVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEM 162
             RD+ ++ ++   +I +    D  K    +YN+  G  T++ E+
Sbjct: 254 TSRDFCYIDNVIQMNILSALAKDSAK--DNIYNVAVGDRTTLNEL 296

>pdb|3RU9|A Chain A, Specific Recognition Of N-Acetylated Substrates And Domain Flexibility In Wbgu: A Udp-Galnac 4-Epimerase Length = 351

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 23/165 (13%)
Query: 4   HGCKN-----LVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSE 58
           H  KN       +++S++ YG    +P  EE     ++PY  TK ++ EI   V+     
Sbjct: 136 HAAKNAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTK-YVNEIYAQVYARTYG 194
Query: 59  WKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTD-YSTKDGT 117
           +K I LRYFN  G        +DP G    ++P  T   +         G D Y   DG 
Sbjct: 195 FKTIGLRYFNVFGRR------QDPNGAYAAVIPKWTAAMLK--------GDDVYINGDGE 240
Query: 118 GVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEM 162
             RD+ ++ ++   +I +    D  K    +YN+  G  T++ E+
Sbjct: 241 TSRDFCYIDNVIQMNILSALAKDSAK--DNIYNVAVGDRTTLNEL 283

>pdb|3RU7|A Chain A, Specific Recognition Of N-Acetylated Substrates And Domain Flexibility In Wbgu: A Udp-Galnac 4-Epimerase Length = 351

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 23/165 (13%)
Query: 4   HGCKN-----LVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSE 58
           H  KN       +++S++ YG    +P  EE     ++PY  TK ++ EI   V+     
Sbjct: 130 HAAKNAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTK-YVNEIYAQVYARTYG 188
Query: 59  WKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTD-YSTKDGT 117
           +K I LRYFN  G        +DP G    ++P  T   +         G D Y   DG 
Sbjct: 189 FKTIGLRYFNVFGRR------QDPNGAYAAVIPKWTAAMLK--------GDDVYINGDGE 234
Query: 118 GVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEM 162
             RD+ ++ ++   +I +    D  K    +YN+  G  T++ E+
Sbjct: 235 TSRDFCYIDNVIQMNILSALAKDSAK--DNIYNVAVGDRTTLNEL 277

>pdb|3EHE|A Chain A, Crystal Structure Of Udp-Glucose 4 Epimerase (Gale-1) From Archaeoglobus Fulgidus Length = 313

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 34/159 (21%)
Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKL----FIEEICRDVHRSD 56
           M   G   +VF+S++TVYG  KV+P  E++P   ++ YG +KL     IE  C   H  D
Sbjct: 101 MRKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALIESYC---HTFD 157
Query: 57  SE-WKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRP-ELTVFGTDYSTK 114
            + W   + R+ N +G   +  +          +  F+ ++   R P EL + G      
Sbjct: 158 MQAW---IYRFANVIGRRSTHGV----------IYDFIMKLK--RNPEELEILG------ 196
Query: 115 DGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGT 153
           +G   + YI++ D  D  +  L    D ++   ++N+G+
Sbjct: 197 NGEQNKSYIYISDCVDAMLFGLRG--DERVN--IFNIGS 231

>pdb|4EGB|A Chain A, 3.0 Angstrom Resolution Crystal Structure Of Dtdp-Glucose 4,6- Dehydratase (Rfbb) From Bacillus Anthracis Str. Ames In Complex With Nad Length = 346

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 73/167 (43%), Gaps = 25/167 (14%)
Query: 9   LVFSSSATVYG-WPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYF 67
           LV  S+  VYG   K    TEE PL   +PY  +K   + I    +++  +  +I+ R  
Sbjct: 144 LVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKASADXIALAYYKT-YQLPVIVTRCS 202
Query: 68  NPVGAHPSGKIGEDPRGIPNNLMPF-VTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVI 126
           N  G          P   P  L+P  VT    G++  L ++G      DG  VRD++HV 
Sbjct: 203 NNYG----------PYQYPEKLIPLXVTNALEGKK--LPLYG------DGLNVRDWLHVT 244
Query: 127 DLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKV 173
           D        LHK    ++G EVYN+G     + +E+V       GK 
Sbjct: 245 DHCSAIDVVLHK---GRVG-EVYNIGGNNEKTNVEVVEQIITLLGKT 287

>pdb|1SB8|A Chain A, Crystal Structure Of Pseudomonas Aeruginosa Udp-N-Acetylglucosamine 4- Epimerase Complexed With Udp-N-Acetylgalactosamine Length = 352

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 73/163 (44%), Gaps = 20/163 (12%)
Query: 7   KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRY 66
           ++  +++S++ YG    +P  E+   + ++PY  TK ++ E+  DV      +  I LRY
Sbjct: 146 QSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTK-YVNELYADVFSRCYGFSTIGLRY 204
Query: 67  FNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTD-YSTKDGTGVRDYIHV 125
           FN  G        +DP G    ++P  T   +         G D Y   DG   RD+ ++
Sbjct: 205 FNVFGRR------QDPNGAYAAVIPKWTSSMIQ--------GDDVYINGDGETSRDFCYI 250
Query: 126 IDLADGH-IAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFE 167
            +    + +AA   LD      +VYN+  G  TS+ ++  A  
Sbjct: 251 ENTVQANLLAATAGLDARN---QVYNIAVGGRTSLNQLFFALR 290

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	208
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	1e-134
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	1e-132
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	1e-132
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	1e-126
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	1e-109
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	1e-108
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	2e-70
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	1e-55
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	5e-52
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	2e-50
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	1e-42
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	1e-36
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	2e-35
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	1e-31
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	1e-29
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	3e-28
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	5e-28
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	6e-28
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	4e-26
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	6e-25
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	1e-24
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	5e-24
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	2e-18
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	2e-17
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	3e-16
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	2e-13
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	7e-13
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	6e-11
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	2e-10
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	2e-08
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	8e-08
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	2e-07
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	2e-05
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	3e-05
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	2e-04

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} Length = 341

 Score =  378 bits (973), Expect = e-134
 Identities = 110/172 (63%), Positives = 126/172 (73%), Gaps = 1/172 (0%)

Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
           M     K +VFSSSATVYG P+  P  E FPL A NPYG+TKL  E+I RDV  +D  W+
Sbjct: 116 MRERAVKRIVFSSSATVYGVPERSPIDETFPLSATNPYGQTKLMAEQILRDVEAADPSWR 175

Query: 61  IILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVR 120
           +  LRYFNPVGAH SG IGEDP GIPNNLMP+V QVAVG+  +L VFG+DY T DGTGVR
Sbjct: 176 VATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVR 235

Query: 121 DYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           DYIHV+DLA GHIAAL  L+         NLGTG+G SVLE+V AFEKASG+
Sbjct: 236 DYIHVVDLARGHIAALDALERRD-ASLTVNLGTGRGYSVLEVVRAFEKASGR 286

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* Length = 348

 Score =  375 bits (965), Expect = e-132
 Identities = 116/173 (67%), Positives = 135/173 (78%), Gaps = 2/173 (1%)

Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPL-EAMNPYGRTKLFIEEICRDVHRSDSEW 59
           M AHG KNLVFSSSATVYG P+ +P  E  P     NPYG++K FIEE+ RD+ ++D  W
Sbjct: 119 MKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTW 178

Query: 60  KIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGV 119
             +LLRYFNP GAH SG IGEDP+GIPNNLMP+V+QVA+GRR  L VFG DY T+DGTGV
Sbjct: 179 NAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGV 238

Query: 120 RDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           RDYIHV+DLA GHIAAL KL + + GC +YNLGTG G SVL+MV A EKASGK
Sbjct: 239 RDYIHVVDLAKGHIAALRKLKE-QCGCRIYNLGTGTGYSVLQMVQAMEKASGK 290

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* Length = 338

 Score =  374 bits (964), Expect = e-132
 Identities = 104/173 (60%), Positives = 128/173 (73%), Gaps = 2/173 (1%)

Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPL-EAMNPYGRTKLFIEEICRDVHRSDSEW 59
           M A   KN +FSSSATVYG    +P  E FP     +PYG++KL +E+I  D+ ++  +W
Sbjct: 111 MRAANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDW 170

Query: 60  KIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGV 119
            I LLRYFNPVGAHPSG +GEDP+GIPNNLMP++ QVAVGRR  L +FG DY T+DGTGV
Sbjct: 171 SIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGV 230

Query: 120 RDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           RDYIHV+DLADGH+ A+ KL + K G  +YNLG G G SVL++V AF KA GK
Sbjct: 231 RDYIHVMDLADGHVVAMEKLAN-KPGVHIYNLGAGVGNSVLDVVNAFSKACGK 282

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 Length = 699

 Score =  371 bits (955), Expect = e-126
 Identities = 101/180 (56%), Positives = 127/180 (70%), Gaps = 8/180 (4%)

Query: 1   MAAHGCKNLVFSSSATVYG----WPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD 56
           M  +     VFSSSATVYG    +P ++P  EE PL   NPYG TK  IE I  D++ SD
Sbjct: 122 MQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSD 181

Query: 57  SE-WKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKD 115
            + WK  +LRYFNP+GAHPSG IGEDP GIPNNL+P++ QVAVGRR +L +FG DY ++D
Sbjct: 182 KKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRD 241

Query: 116 GTGVRDYIHVIDLADGHIAALHKLD---DPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           GT +RDYIHV+DLA GHIAAL  L+   + +  C  +NLG+GKG++V E+  AF KASG 
Sbjct: 242 GTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGI 301

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* Length = 397

 Score =  318 bits (818), Expect = e-109
 Identities = 73/198 (36%), Positives = 96/198 (48%), Gaps = 27/198 (13%)

Query: 1   MAAHGCKNLVFSSSATVYGWP-------KVVPCTEEFPLEAMNPYGRTKLFIEEICRDVH 53
           M  H C  ++FSSSA ++G P          P          +PYG +KL  E + RD  
Sbjct: 131 MLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCA 190

Query: 54  RSDSEWKIILLRYFNPVGAHPSGKIGEDPRG----IPNNLMPFVTQVAVGRR-------- 101
            +    K I LRYFN  GAH  G IGE  +G    IP  L   ++ +A  +R        
Sbjct: 191 EAYG-IKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHEDAS 249

Query: 102 --PELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKL-----DDPKIGCEVYNLGTG 154
               + +FGTDY T DGT VRDY+HV DLA  HI AL  +     +D      V+NLGT 
Sbjct: 250 TDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTS 309

Query: 155 KGTSVLEMVAAFEKASGK 172
           +G SV E++    K +G 
Sbjct: 310 RGYSVREVIEVARKTTGH 327

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} Length = 330

 Score =  311 bits (800), Expect = e-108
 Identities = 70/172 (40%), Positives = 93/172 (54%), Gaps = 3/172 (1%)

Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
           M        +FSS+A  YG   V   TEE      N YG TKL IE++     ++    +
Sbjct: 105 MDEFKVDKFIFSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQAS-NLR 163

Query: 61  IILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVR 120
             + RYFN  GA P+G IGED R    +L+P V QVA+G+R ++ +FG DY+T DGT +R
Sbjct: 164 YKIFRYFNVAGATPNGIIGEDHRP-ETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIR 222

Query: 121 DYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           DYIHV DL   H   L  L +     + YNLG G G SV E+V A  + +  
Sbjct: 223 DYIHVEDLVAAHFLGLKDLQNGG-ESDFYNLGNGNGFSVKEIVDAVREVTNH 273

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330

 Score =  216 bits (552), Expect = 2e-70
 Identities = 39/172 (22%), Positives = 62/172 (36%), Gaps = 30/172 (17%)

Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
            +  G K L+   +A  YG P  VP   + P      YG +K   E          S+  
Sbjct: 123 ASKAGVKRLLNFQTALCYGRPATVPIPIDSPTAPFTSYGISKTAGEAFLM-----MSDVP 177

Query: 61  IILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVR 120
           ++ LR  N  G      IG  P         F  ++  G++     F +D        VR
Sbjct: 178 VVSLRLANVTGPR--LAIGPIP--------TFYKRLKAGQK----CFCSDT-------VR 216

Query: 121 DYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           D++ + D       +L +         V+N+ TG+G S+ E+        G 
Sbjct: 217 DFLDMSDFLAIADLSLQEGR----PTGVFNVSTGEGHSIKEVFDVVLDYVGA 264

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311

 Score =  178 bits (453), Expect = 1e-55
 Identities = 49/174 (28%), Positives = 81/174 (46%), Gaps = 18/174 (10%)

Query: 1   MAAHGCKNLVFSSS-ATVYG-WPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSE 58
              +G + LVF+S+   +YG  P+     E +P    +PY  +K   E       +S   
Sbjct: 104 CRQYGVEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFEHYLSVYGQS-YG 162

Query: 59  WKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTG 118
            K + LRY N  G        +DP G    ++    +  +   P +T++       D   
Sbjct: 163 LKWVSLRYGNVYGP------RQDPHG-EAGVVAIFAERVLKGLP-VTLYARKTPG-DEGC 213

Query: 119 VRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           VRDY++V D+A+ H  AL  L+       +YN+GTG+G +  E++ A  +A+GK
Sbjct: 214 VRDYVYVGDVAEAHALALFSLE------GIYNVGTGEGHTTREVLMAVAEAAGK 261

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312

 Score =  168 bits (429), Expect = 5e-52
 Identities = 44/172 (25%), Positives = 71/172 (41%), Gaps = 18/172 (10%)

Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
               G + +VF+SS+TVYG   V+P  EE P + ++ YG  K   E +C    R     +
Sbjct: 100 ARQTGVRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCATYARL-FGVR 158

Query: 61  IILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVR 120
            + +RY N VG      +  D          F+ ++       L V G      DGT  +
Sbjct: 159 CLAVRYANVVGPRLRHGVIYD----------FIMKLRRNPNV-LEVLG------DGTQRK 201

Query: 121 DYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
            Y++V D  +  +AA  K ++        N+G      VL++     +  G 
Sbjct: 202 SYLYVRDAVEATLAAWKKFEEMDAPFLALNVGNVDAVRVLDIAQIVAEVLGL 253

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313

 Score =  164 bits (418), Expect = 2e-50
 Identities = 36/172 (20%), Positives = 69/172 (40%), Gaps = 22/172 (12%)

Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
           M   G   +VF+S++TVYG  KV+P  E++P   ++ YG +KL  E +      +  + +
Sbjct: 101 MRKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALIESYCHT-FDMQ 159

Query: 61  IILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVR 120
             + R+ N +G             I      F+ ++       L + G      +G   +
Sbjct: 160 AWIYRFANVIGRRS------THGVIY----DFIMKLKRNPEE-LEILG------NGEQNK 202

Query: 121 DYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
            YI++ D  D  +  L   +       ++N+G+     V  +     +  G 
Sbjct: 203 SYIYISDCVDAMLFGLRGDER----VNIFNIGSEDQIKVKRIAEIVCEELGL 250

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404

 Score =  146 bits (371), Expect = 1e-42
 Identities = 38/194 (19%), Positives = 67/194 (34%), Gaps = 33/194 (17%)

Query: 1   MAAHGCK-NLVFSSSATVYGWPKV------VPCTEE-------FPLEAMNPYGRTKLFIE 46
           +   G + +LV   +   YG P +      +  T         +P +A + Y  +K+   
Sbjct: 141 IKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDS 200

Query: 47  EICRDVHRSDSEWKIILLRYFN-------PVGAHPSGKIGEDPRGIPNN-LMPFVTQVAV 98
                  ++    +   L               H   +   D   +    L  F  Q AV
Sbjct: 201 HNIAFTCKAWG-IRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCVQAAV 259

Query: 99  GRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTS 158
           G    LTV+G    T+    +RD +  +++A  + A   +         V+N  T +  S
Sbjct: 260 GHP--LTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGE-------FRVFNQFTEQ-FS 309

Query: 159 VLEMVAAFEKASGK 172
           V E+ +   KA  K
Sbjct: 310 VNELASLVTKAGSK 323

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342

 Score =  129 bits (327), Expect = 1e-36
 Identities = 36/179 (20%), Positives = 61/179 (34%), Gaps = 24/179 (13%)

Query: 1   MAAHGCKN-----LVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRS 55
           +     K+     +VF+SS  V+G P   P  +EF    +  YG  K   E +  D  R 
Sbjct: 123 IRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPLTSYGTQKAICELLLSDYSR- 181

Query: 56  DSEWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFG--TDYST 113
              +  I +R          GK      G  +N++    +  VG+   L V      +  
Sbjct: 182 RGFFDGIGIRLPT--ICIRPGKPNAAASGFFSNILR---EPLVGQEAVLPVPESIRHWHA 236

Query: 114 KDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
              + V   IH   +    +                ++  G   +V E + A  K +G+
Sbjct: 237 SPRSAVGFLIHGAMIDVEKVGPRR----------NLSM-PGLSATVGEQIEALRKVAGE 284

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311

 Score =  125 bits (317), Expect = 2e-35
 Identities = 34/170 (20%), Positives = 61/170 (35%), Gaps = 24/170 (14%)

Query: 4   HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIIL 63
           +   N+V++S+ + Y     +P  E+        YG +KL  E I     R      I  
Sbjct: 99  NNISNIVYASTISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSRK-KGLCIKN 157

Query: 64  LRYFNPVGAHPSGKIGEDPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDY 122
           LR+ +  G               N ++  F  Q   G +   T+        +    R++
Sbjct: 158 LRFAHLYG----------FNEKNNYMINRFFRQAFHGEQL--TLHA------NSVAKREF 199

Query: 123 IHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           ++  D A   I AL +    +     +N+G+G   +  E+      A G 
Sbjct: 200 LYAKDAAKSVIYALKQ----EKVSGTFNIGSGDALTNYEVANTINNAFGN 245

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321

 Score =  116 bits (293), Expect = 1e-31
 Identities = 39/174 (22%), Positives = 72/174 (41%), Gaps = 24/174 (13%)

Query: 3   AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKII 62
           + G   +V  S+  VYG    +P  E+ PL   +PY  +K+ +E +     R+    ++ 
Sbjct: 108 SVGVPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAASKVGLEMVAGAHQRASVAPEVG 167

Query: 63  LLRYFNPVGAHPSGKIGEDPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRD 121
           ++R+FN  G          P   P+ L+P     +         V G      DG   RD
Sbjct: 168 IVRFFNVYG----------PGERPDALVPRLCANLLTRNEL--PVEG------DGEQRRD 209

Query: 122 YIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKVHI 175
           + ++ D+ D  +A  ++         V N G+G+  SV +++   +  S    +
Sbjct: 210 FTYITDVVDKLVALANRPL-----PSVVNFGSGQSLSVNDVIRILQATSPAAEV 258

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310

 Score =  110 bits (278), Expect = 1e-29
 Identities = 41/181 (22%), Positives = 66/181 (36%), Gaps = 31/181 (17%)

Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRS-DSEW 59
                    +++SSA  YG             + +N YG +K   +E  R +    +S+ 
Sbjct: 104 CLEREIP-FLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQI 162

Query: 60  KIILLRYFNPVGAHPSGKIGEDPRG-----IPNNLMPFVTQVAVGRRPELTVFGTDYSTK 114
             +  RYFN  G        E  +G       +      TQ+  G  P+L   G      
Sbjct: 163 --VGFRYFNVYGPR------EGHKGSMASVAFH----LNTQLNNGESPKL-FEG------ 203

Query: 115 DGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKVH 174
                RD+++V D+AD ++  L           ++NLGTG+  S   +  A      K  
Sbjct: 204 SENFKRDFVYVGDVADVNLWFLENGV-----SGIFNLGTGRAESFQAVADATLAYHKKGQ 258

Query: 175 I 175
           I
Sbjct: 259 I 259

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352

 Score =  107 bits (269), Expect = 3e-28
 Identities = 36/170 (21%), Positives = 67/170 (39%), Gaps = 18/170 (10%)

Query: 4   HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIIL 63
              ++  +++S++ YG    +P  E+   + ++PY  TK   E       R    +  I 
Sbjct: 143 AKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRC-YGFSTIG 201

Query: 64  LRYFNPVGAHPSGKIGEDPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDY 122
           LRYFN  G         DP G    ++P + + +  G      + G      DG   RD+
Sbjct: 202 LRYFNVFG--RRQ----DPNGAYAAVIPKWTSSMIQGDDV--YING------DGETSRDF 247

Query: 123 IHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
            ++ +    ++ A           +VYN+  G  TS+ ++  A      +
Sbjct: 248 CYIENTVQANLLAATA--GLDARNQVYNIAVGGRTSLNQLFFALRDGLAE 295

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357

 Score =  107 bits (269), Expect = 5e-28
 Identities = 40/180 (22%), Positives = 66/180 (36%), Gaps = 29/180 (16%)

Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
                    +++SSA  YG             + +N +G +K   +E  R +    +  +
Sbjct: 151 CLEREIP-FLYASSAATYGGRTSDFIESREYEKPLNVFGYSKFLFDEYVRQILPE-ANSQ 208

Query: 61  IILLRYFNPVGAHPSGKIGEDPRG-----IPNNLMPFVTQVAVGRRPELTVFGTDYSTKD 115
           I+  RYFN  G        E  +G       +      TQ+  G  P+L   G       
Sbjct: 209 IVGFRYFNVYGPR------EGHKGSMASVAFH----LNTQLNNGESPKL-FEG------S 251

Query: 116 GTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKVHI 175
               RD+++V D+AD ++  L           ++NLGTG+  S   +  A      K  I
Sbjct: 252 ENFKRDFVYVGDVADVNLWFLENGV-----SGIFNLGTGRAESFQAVADATLAYHKKGQI 306

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333

 Score =  106 bits (267), Expect = 6e-28
 Identities = 33/174 (18%), Positives = 57/174 (32%), Gaps = 33/174 (18%)

Query: 1   MAAHGCKNLVFSSSATVYGW-PKVVPCTEEFPLEAMN-PYGRTKLFIEEICRDVHRSDSE 58
              +     V+  +A  YG  P   P   + P    N  Y  +K   E+        D  
Sbjct: 124 AKKNNVGRFVYFQTALCYGVKPIQQPVRLDHPRNPANSSYAISKSANEDYLE-YSGLDF- 181

Query: 59  WKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTG 118
              +  R  N VG          PR +   L  F  +++ G++                 
Sbjct: 182 ---VTFRLANVVG----------PRNVSGPLPIFFQRLSEGKKC-----------FVTKA 217

Query: 119 VRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
            RD++ V DLA   + A+  +         Y+  +G   ++ E+  A  +A   
Sbjct: 218 RRDFVFVKDLARATVRAVDGVGH-----GAYHFSSGTDVAIKELYDAVVEAMAL 266

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362

 Score =  102 bits (256), Expect = 4e-26
 Identities = 39/176 (22%), Positives = 72/176 (40%), Gaps = 25/176 (14%)

Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
             +   K ++++SSA VYG  K  P          N YG +KL ++E     H +D+   
Sbjct: 126 ARSKKAK-VIYASSAGVYGNTKA-PNVVGKNESPENVYGFSKLCMDEFVLS-HSNDNVQ- 181

Query: 61  IILLRYFNPVGAHPSGKIGEDPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGV 119
            + LRYFN  G  P     E  +    +++          +     +F        G  +
Sbjct: 182 -VGLRYFNVYG--P----REFYKEKTASMVLQLALGAMAFKEV--KLFE------FGEQL 226

Query: 120 RDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKVHI 175
           RD++++ D+   ++ A+           VYN+G  +  S  E+V+  ++  G   +
Sbjct: 227 RDFVYIEDVIQANVKAMKAQK-----SGVYNVGYSQARSYNEIVSILKEHLGDFKV 277

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score = 98.2 bits (245), Expect = 6e-25
 Identities = 23/176 (13%), Positives = 50/176 (28%), Gaps = 16/176 (9%)

Query: 1   MAAHGCKNLVFSSSATVYG-WPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEW 59
              H  + +V  S+  V+G                   +G TK+  E + +  +      
Sbjct: 99  AKQHRVEKVVIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAELLGQYYYE-KFGL 157

Query: 60  KIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGV 119
            +  LRY   +          +P     +    +   AV R      +            
Sbjct: 158 DVRSLRYPGIISYKA------EPTAGTTDYAVEIFYYAVKREK-YKCYL------APNRA 204

Query: 120 RDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKVHI 175
              +++ D     +       D  +    YN+ T    +  E+ +  ++   +  I
Sbjct: 205 LPMMYMPDALKALVDLYEADRDKLVLRNGYNV-TAYTFTPSELYSKIKERIPEFEI 259

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351

 Score = 97.7 bits (244), Expect = 1e-24
 Identities = 37/170 (21%), Positives = 67/170 (39%), Gaps = 18/170 (10%)

Query: 4   HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIIL 63
              ++  +++S++ YG    +P  EE     ++PY  TK   E   +   R+   +K I 
Sbjct: 141 AQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNEIYAQVYART-YGFKTIG 199

Query: 64  LRYFNPVGAHPSGKIGEDPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDY 122
           LRYFN  G         DP G    ++P +   +  G      + G      DG   RD+
Sbjct: 200 LRYFNVFG--RRQ----DPNGAYAAVIPKWTAAMLKGDDV--YING------DGETSRDF 245

Query: 123 IHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
            ++ ++   +I +   L        +YN+  G  T++ E+          
Sbjct: 246 CYIDNVIQMNILSA--LAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNL 293

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377

 Score = 96.6 bits (241), Expect = 5e-24
 Identities = 37/183 (20%), Positives = 66/183 (36%), Gaps = 29/183 (15%)

Query: 3   AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMN------PYGRTKLFIEEICRDVHRS- 55
               K +V+S++                  + ++      PY  +K+F E      H+  
Sbjct: 140 FKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH 199

Query: 56  --DSEWKIILLRYFN---PVGAHPSGKIGEDPRGIPNNLMP-FVTQVAVGRRPELTVFGT 109
                   +  R+ N   P     +G+    P  +  N+ P F+ +   G      +   
Sbjct: 200 QLP----TVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPL--PLEN- 252

Query: 110 DYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKA 169
                 G   RD+I V D+A+G IA          G  VYN+ +GK TS+ ++     + 
Sbjct: 253 -----GGVATRDFIFVEDVANGLIACAAD---GTPG-GVYNIASGKETSIADLATKINEI 303

Query: 170 SGK 172
           +G 
Sbjct: 304 TGN 306

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379

 Score = 80.9 bits (200), Expect = 2e-18
 Identities = 37/179 (20%), Positives = 64/179 (35%), Gaps = 29/179 (16%)

Query: 3   AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEA-MNP------YGRTKLFIEEICRDVHRS 55
            +G K   ++SSA +Y   K +  T     E+   P      +G  KL  EE+C+  ++ 
Sbjct: 134 INGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNK- 192

Query: 56  DSEWKIILLRYFNPVGAHPSGKIGEDPRG--IPNNLMPFVTQVAVGRRPELTVFGTDYST 113
           D   +  + R+ N  G  P G   +  R          F  +          ++G     
Sbjct: 193 DFGIECRIGRFHNIYG--PFGTW-KGGREKAPAA----FCRKAQTSTDR-FEMWG----- 239

Query: 114 KDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
            DG   R +  + +  +G +      D      E  N+G+ +  S+ EM         K
Sbjct: 240 -DGLQTRSFTFIDECVEGVLRLTKS-DFR----EPVNIGSDEMVSMNEMAEMVLSFEEK 292

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267

 Score = 77.0 bits (190), Expect = 2e-17
 Identities = 23/149 (15%), Positives = 42/149 (28%), Gaps = 23/149 (15%)

Query: 1   MAAHGCKNLVFSSSATVYGW-PKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEW 59
               G   +VF+SS    G+ P+      E P    + YG +K F E++    +    + 
Sbjct: 97  ARNLGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLASLYYHK-FDI 155

Query: 60  KIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGR------RPELTVFGTDYST 113
           + + +R  +           +D R +   L        + R           V+G     
Sbjct: 156 ETLNIRIGSCFPKP------KDARMMATWLSVDDFMRLMKRAFVAPKLGCTVVYG----- 204

Query: 114 KDGTGVRDYIHVIDLADGHIAALHKLDDP 142
                   +    D            D  
Sbjct: 205 -ASANTESW---WDNDKSAFLGWVPQDSS 229

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score = 74.6 bits (184), Expect = 3e-16
 Identities = 28/176 (15%), Positives = 54/176 (30%), Gaps = 33/176 (18%)

Query: 2   AAHGCKNLVF-SSSATVYGWPKVVPCTEEFPLE----AMNPYGRTKLFIEEICRDVHRSD 56
                  +++  S+  +   P+ +P  E    +      + Y   K  ++E  R+  R+ 
Sbjct: 114 LQARVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQARNG 173

Query: 57  SEWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDG 116
                        V   P   +G     I       +T +  G                 
Sbjct: 174 ----------LPVVIGIPGMVLG--ELDIGPTTGRVITAIGNGEMTHYV----------- 210

Query: 117 TGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
            G R+ I   +   G + AL +    +IG E Y L  G    + ++     +  G+
Sbjct: 211 AGQRNVIDAAEAGRGLLMALER---GRIG-ERYLLT-GHNLEMADLTRRIAELLGQ 261

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score = 66.2 bits (162), Expect = 2e-13
 Identities = 21/137 (15%), Positives = 36/137 (26%), Gaps = 21/137 (15%)

Query: 1   MAAHGCKNLVFSSSATVYGW-PKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEW 59
             AHG   +VF+SS    G+ P+      + P      YG +K F E + R       + 
Sbjct: 98  ARAHGQPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYGVSKCFGENLARMYFDKFGQ- 156

Query: 60  KIILLRYFNPVGAHPSGKIGEDPRGIPNNLMP-FVTQ-----VAVGRRPELTVFGTDYST 113
           +  L+R  +            + R +                          V+G     
Sbjct: 157 ETALVRIGSCTPEP------NNYRMLSTWFSHDDFVSLIEAVFRAPVLGCPVVWG----- 205

Query: 114 KDGTGVRDYIHVIDLAD 130
                   +        
Sbjct: 206 -ASANDAGWW-DNSHLG 220

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312

 Score = 65.0 bits (159), Expect = 7e-13
 Identities = 27/175 (15%), Positives = 51/175 (29%), Gaps = 20/175 (11%)

Query: 4   HGCKNLVFSSSATVYGWPKVVPCTEEF-PLEAMNPYGRTKLFIEEICRDVHRSDSEWKI- 61
              K + + SS  V+G       T ++  +E    YG +K   E  C   H     + + 
Sbjct: 108 KKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGISKQAGERWCEYYHN---IYGVD 164

Query: 62  -ILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVR 120
              +RY   +    +   G       +       +    ++     F             
Sbjct: 165 VRSIRYPGLIS-WSTPPGGGTTDYAVD----IFYKAIADKKY--ECFL------SSETKM 211

Query: 121 DYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKVHI 175
             +++ D  D  I  +    +       YNL     T   E+    +K   +  I
Sbjct: 212 PMMYMDDAIDATINIMKAPVEKIKIHSSYNLAAMSFTPT-EIANEIKKHIPEFTI 265

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369

 Score = 59.9 bits (145), Expect = 6e-11
 Identities = 25/158 (15%), Positives = 46/158 (29%), Gaps = 25/158 (15%)

Query: 18  YGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGK 77
                 +  +        NPYG +KL  E++ R+         + + R+ N  G      
Sbjct: 83  NTKKPAILLSSSIQATQDNPYGESKLQGEQLLREYAEE-YGNTVYIYRWPNLFG------ 135

Query: 78  IGEDPRGIPN---NLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIA 134
                   PN    +  F  ++A     ++          D        +V D+      
Sbjct: 136 ----KWCKPNYNSVIATFCYKIARNEEIQV---------NDRNVELTLNYVDDIVAEIKR 182

Query: 135 ALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           A+     P I   V  +      ++ E+V    K    
Sbjct: 183 AIEG--TPTIENGVPTVPNVFKVTLGEIVDLLYKFKQS 218

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A Length = 345

 Score = 58.2 bits (141), Expect = 2e-10
 Identities = 26/172 (15%), Positives = 58/172 (33%), Gaps = 26/172 (15%)

Query: 2   AAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNP-------YGRTKLFIEEICRDVHR 54
             +  + ++F S++ VYG        E+     + P       Y  +K  ++ +      
Sbjct: 106 VKYRKR-IIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGE 164

Query: 55  SDSEWKIILLRYFNPVG---AHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDY 111
            +   +  L R FN +G    + +       R I       +    V   P + +     
Sbjct: 165 KEG-LQFTLFRPFNWMGPRLDNLNAARIGSSRAITQ----LILN-LVEGSP-IKLID--- 214

Query: 112 STKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG-TSVLEM 162
               G   R +  + D  +  +  + +    +   E+ N+G  +   S+ E+
Sbjct: 215 ---GGKQKRCFTDIRDGIEA-LYRIIENAGNRCDGEIINIGNPENEASIEEL 262

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* Length = 343

 Score = 52.0 bits (125), Expect = 2e-08
 Identities = 45/166 (27%), Positives = 69/166 (41%), Gaps = 31/166 (18%)

Query: 3   AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNP------YGRTKLFIEEICRDVHRS- 55
             G + L+ S+S  VYG P+V P +E++    +NP      Y   K   E +C    +  
Sbjct: 131 RVGARLLLASTS-EVYGDPEVHPQSEDYWG-HVNPIGPRACYDEGKRVAETMCYAYMKQE 188

Query: 56  DSEWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKD 115
             E ++   R FN  G         D R + N    F+ Q   G    LTV+G       
Sbjct: 189 GVEVRVA--RIFNTFG---PRMHMNDGRVVSN----FILQALQGE--PLTVYG------S 231

Query: 116 GTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLE 161
           G+  R + +V DL +G    L  L +  +     NLG  +  ++LE
Sbjct: 232 GSQTRAFQYVSDLVNG----LVALMNSNVS-SPVNLGNPEEHTILE 272

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364

 Score = 50.5 bits (120), Expect = 8e-08
 Identities = 30/172 (17%), Positives = 46/172 (26%), Gaps = 15/172 (8%)

Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
               G K+ +    +         P TE+ P      Y      +E+I  +         
Sbjct: 116 SLQTGRKHYMGPFESYGKIESHDPPYTEDLPRL---KYMNFYYDLEDIMLEEVEKKEGLT 172

Query: 61  IILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVR 120
             + R  N  G  P             NL+  +   A   + E  V           G  
Sbjct: 173 WSVHRPGNIFGFSP---------YSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYS 223

Query: 121 DYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           D      +A+ HI A     DP    E +N+  G             +  G 
Sbjct: 224 DCSDADLIAEHHIWAAV---DPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGV 272

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286

 Score = 49.3 bits (118), Expect = 2e-07
 Identities = 25/150 (16%), Positives = 40/150 (26%), Gaps = 34/150 (22%)

Query: 2   AAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKI 61
                +++ F SS  VYG        E+ P  A +  G+  L  E +          +  
Sbjct: 97  EGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRMLEAEALLAA-------YSS 149

Query: 62  ILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRD 121
            +LR         SG  G                   GR   +    T           +
Sbjct: 150 TILR--------FSGIYGP------------------GRLRMIRQAQTPEQWPARNAWTN 183

Query: 122 YIHVIDLADGHIAALHKLDDPKIGCEVYNL 151
            IH  D A      + +         +Y +
Sbjct: 184 RIHRDDGAAFIAYLIQQRSHAVPE-RLYIV 212

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 Length = 347

 Score = 43.0 bits (102), Expect = 2e-05
 Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 10/71 (14%)

Query: 104 LTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG--TSVLE 161
            T+ G      +G  VRD +H  D+   +  AL  +     G   +N+G       S+LE
Sbjct: 227 FTISG------NGKQVRDVLHAEDMISLYFTALANV-SKIRG-NAFNIGGTIVNSLSLLE 278

Query: 162 MVAAFEKASGK 172
           +    E     
Sbjct: 279 LFKLLEDYCNI 289

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* Length = 357

 Score = 42.9 bits (101), Expect = 3e-05
 Identities = 28/173 (16%), Positives = 52/173 (30%), Gaps = 13/173 (7%)

Query: 4   HGCKNLVFSSSATVYGWPKVV-PCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKII 62
            G K +V  +S   Y   + +    E   +   +PY  +K   E +      S       
Sbjct: 122 GGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANY 181

Query: 63  LLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDY 122
                          IG     +   +   +      +   +         ++   +R +
Sbjct: 182 GQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVII---------RNPHAIRPW 232

Query: 123 IHVIDLADGHIAALHKL-DDPKIGCEVYNLGTGKG--TSVLEMVAAFEKASGK 172
            HV++   G++    KL  D     E +N G      T V  +V    K  G+
Sbjct: 233 QHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGE 285

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} Length = 321

 Score = 40.2 bits (95), Expect = 2e-04
 Identities = 37/179 (20%), Positives = 65/179 (36%), Gaps = 46/179 (25%)

Query: 13  SSATVYG--WPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKI-----ILLR 65
            S+  YG   P+  P +EE  L  M+PYG +K  +  + R   ++   + +         
Sbjct: 125 GSSEEYGMILPEESPVSEENQLRPMSPYGVSKASVGMLARQYVKA---YGMDIIHTRT-- 179

Query: 66  YFNPVGAHPSGKIGEDPRGIPNNLMPFVT-----QVA---VGRRPELTVFGTDYSTKDGT 117
            FN    H                  FVT     Q+    + ++  +   G   + +D T
Sbjct: 180 -FN----HIGPGQSLG----------FVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFT 224

Query: 118 GVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMV-AAFEKASGKVHI 175
            VRD +           A   L       +VYN+ +G GT + +++      A+ K+  
Sbjct: 225 DVRDIVQ----------AYWLLSQYGKTGDVYNVCSGIGTRIQDVLDLLLAMANVKIDT 273

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	208
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.94
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.93
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.93
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.93
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.92
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.92
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.92
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.92
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.92
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.92
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.92
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.91
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.9
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.9
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.9
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.9
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.89
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.89
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.89
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.89
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.89
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.89
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.89
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.89
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.88
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.88
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.88
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.88
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.87
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.87
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.87
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.87
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.87
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.86
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.86
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.86
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.86
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.85
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.85
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.85
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.85
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.85
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.84
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.84
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.84
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.84
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.83
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.81
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.81
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.8
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.8
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.78
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.77
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.77
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.76
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.76
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.75
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.75
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.73
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.72
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.72
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.66
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.65
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.64
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.64
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.63
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.61
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.61
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.58
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.54
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.51
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.49
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.48
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.46
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.44
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.44
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.44
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.41
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.33
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.32
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.29
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.29
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.29
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.28
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.27
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.09
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.08
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	98.97
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	98.95
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	98.92
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	98.67
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	98.67
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	98.65
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	98.65
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	98.6
1spx_A	278	Short-chain reductase family member (5L265); paral	98.6
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	98.58
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	98.56
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	98.5
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	98.5
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	98.49
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	98.48
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	98.46
1xq1_A	266	Putative tropinone reducatse; structural genomics,	98.42
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	98.4
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	98.39
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	98.38
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	98.36
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	98.35
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	98.35
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	98.31
4dqx_A	277	Probable oxidoreductase protein; structural genomi	98.31
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	98.3
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	98.3
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	98.29
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	98.29
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	98.29
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	98.29
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	98.28
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	98.27
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	98.27
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	98.26
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	98.25
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	98.25
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	98.23
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	98.23
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	98.23
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	98.21
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	98.21
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	98.21
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	98.2
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	98.2
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	98.2
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	98.19
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	98.19
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	98.18
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	98.16
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	98.16
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	98.16
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	98.16
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	98.15
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	98.15
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	98.15
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	98.14
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	98.14
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	98.13
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	98.13
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	98.11
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	98.11
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	98.11
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	98.1
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	98.1
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	98.09
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	98.09
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	98.08
1xhl_A	297	Short-chain dehydrogenase/reductase family member	98.08
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	98.07
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	98.06
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	98.06
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	98.05
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	98.05
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	98.04
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	98.04
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	98.04
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	98.04
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	98.03
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	98.02
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	98.02
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	98.02
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	98.02
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	98.01
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	98.01
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	98.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	98.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	97.99
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	97.99
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	97.98
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	97.97
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	97.97
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	97.97
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	97.96
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	97.95
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	97.95
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	97.95
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	97.94
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	97.94
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	97.94
4e4y_A	244	Short chain dehydrogenase family protein; structur	97.94
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	97.93
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	97.92
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	97.92
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	97.91
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	97.91
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	97.91
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	97.9
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	97.89
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	97.89
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	97.88
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	97.87
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	97.87
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	97.86
3rih_A	293	Short chain dehydrogenase or reductase; structural	97.86
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	97.86
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	97.85
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	97.84
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	97.84
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	97.84
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	97.83
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	97.81
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	97.81
3imf_A	257	Short chain dehydrogenase; structural genomics, in	97.8
1xkq_A	280	Short-chain reductase family member (5D234); parra	97.8
3cxt_A	291	Dehydrogenase with different specificities; rossma	97.8
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	97.8
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.78
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.78
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	97.78
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	97.75
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	97.74
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	97.74
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	97.72
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	97.71
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	97.71
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	97.71
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	97.7
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	97.69
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	97.69
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	97.67
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	97.66
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	97.65
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	97.64
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	97.64
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.63
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.6
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	97.59
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	97.58
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	97.57
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	97.57
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	97.56
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	97.55
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	97.54
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	97.53
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	97.53
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	97.53
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	97.53
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	97.52
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	97.52
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	97.51
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	97.5
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.49
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	97.48
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	97.47
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	97.44
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	97.44
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	97.42
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	97.41
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	97.4
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	97.39
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	97.37
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	97.37
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.32
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	97.29
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	97.26
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	97.26
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	97.24
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	97.23
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	97.22
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	97.17
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	97.14
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	97.12
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	97.1
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	97.09
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	97.03
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	96.91
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	96.81
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	96.8
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	96.7
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	96.67
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	96.61
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	96.53
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	96.38
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	96.35
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	96.27
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	96.19
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	96.13
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	96.11
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	96.11
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	96.1
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	96.0
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	95.91
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	95.84
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	95.67
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	95.5
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	95.08
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	95.07
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	94.99
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	94.95
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	94.71
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	94.15
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	93.54
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	93.48
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	93.45
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	88.7
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	88.33
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	85.79
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	83.31

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.94  E-value=3.1e-26  Score=186.47  Aligned_cols=177  Identities=62%  Similarity=1.006  Sum_probs=151.1

Q ss_pred             ccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      ++.++++||++||+++||.....+++|+.+..|.+.|+.+|.++|.+++.++.++++++++++||+++||+..++.+|..
T Consensus       117 ~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~  196 (341)
T 3enk_A          117 RERAVKRIVFSSSATVYGVPERSPIDETFPLSATNPYGQTKLMAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGED  196 (341)
T ss_dssp             HHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCC
T ss_pred             HhCCCCEEEEEecceEecCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCC
Confidence            46788999999999999987777899999999999999999999999999988873499999999999999877777766


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHHH
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLE  161 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e  161 (208)
                      .....+.+++++.+...+...++.++|..+..+++++.++|+|++|+|++++.+++++.. ...+++||+++++.+|+.|
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~-~~~~~~~ni~~~~~~s~~e  275 (341)
T 3enk_A          197 PAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYIHVVDLARGHIAALDALER-RDASLTVNLGTGRGYSVLE  275 (341)
T ss_dssp             CSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHH-HTSCEEEEESCSCCEEHHH
T ss_pred             cccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEeeEEHHHHHHHHHHHHHhhhc-CCcceEEEeCCCCceeHHH
Confidence            666567888877777777666888888666666789999999999999999999986210 2446999999999999999


Q ss_pred             HHHHHHHHhCCCceEEEe
Q 028478          162 MVAAFEKASGKVHIFALF  179 (208)
Q Consensus       162 ~~~~i~~~~g~~~~~~~~  179 (208)
                      +++.+.+.+|.+.++...
T Consensus       276 ~~~~i~~~~g~~~~~~~~  293 (341)
T 3enk_A          276 VVRAFEKASGRAVPYELV  293 (341)
T ss_dssp             HHHHHHHHHCSCCCEEEE
T ss_pred             HHHHHHHHhCCCcceeeC
Confidence            999999999998776543

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.93  E-value=3.2e-24  Score=173.81  Aligned_cols=173  Identities=39%  Similarity=0.605  Sum_probs=140.6

Q ss_pred             ccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      ++.++++|||+||..+|+.....+++|+++..|.+.|+.+|.++|.+++.+++++ +++++++||+++||+...+.+|..
T Consensus       106 ~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~ilrp~~v~G~~~~~~~g~~  184 (330)
T 2c20_A          106 DEFKVDKFIFSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQAS-NLRYKIFRYFNVAGATPNGIIGED  184 (330)
T ss_dssp             HHTTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHTS-SCEEEEEECSEEECCCTTCSSCCC
T ss_pred             HHcCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCChHHHHHHHHHHHHHHHHHHh-CCcEEEEecCcccCCCCcCccccc
Confidence            4568899999999999997666789999999999999999999999999998887 999999999999999755555443


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHHH
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLE  161 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e  161 (208)
                      . .....+++.+.+...+..+++.++|.+++..++++.++|+|++|+|++++.+++++... ..+++||+++++.+|+.|
T Consensus       185 ~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~~~~~~~~-~~~~~~ni~~~~~~s~~e  262 (330)
T 2c20_A          185 H-RPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVAAHFLGLKDLQNG-GESDFYNLGNGNGFSVKE  262 (330)
T ss_dssp             C-SSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHHHHHHHHHHHHHHHTT-CCCEEEECCCTTCBCHHH
T ss_pred             c-ccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHHHHHHHHHHHhccccC-CCCCeEEeCCCCCccHHH
Confidence            2 12345677665655555457888875555556888999999999999999999874211 235899999999999999


Q ss_pred             HHHHHHHHhCCCceEE
Q 028478          162 MVAAFEKASGKVHIFA  177 (208)
Q Consensus       162 ~~~~i~~~~g~~~~~~  177 (208)
                      +++.+.+.+|.+.++.
T Consensus       263 ~~~~i~~~~g~~~~~~  278 (330)
T 2c20_A          263 IVDAVREVTNHEIPAE  278 (330)
T ss_dssp             HHHHHHHHTTSCCCEE
T ss_pred             HHHHHHHHhCCCCcee
Confidence            9999999999876654

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.93  E-value=1.5e-24  Score=174.20  Aligned_cols=162  Identities=20%  Similarity=0.248  Sum_probs=133.5

Q ss_pred             CccCCCCEEEEeccccccCCCCCCCCCCCC----CCCCCC-hHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCC
Q 028478            1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEF----PLEAMN-PYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPS   75 (208)
Q Consensus         1 a~~~~vk~~i~~SS~~vyg~~~~~~~~E~~----~~~p~~-~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~   75 (208)
                      |++.++++|||+||.++||.....+++|++    +..|.+ .|+.+|.++|++++.+++.+ +++++++||+++||+...
T Consensus       100 ~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~ilRp~~v~Gp~~~  178 (319)
T 4b8w_A          100 AFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQY-GCTFTAVIPTNVFGPHDN  178 (319)
T ss_dssp             HHHTTCSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSSSHHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECEEECTTCC
T ss_pred             HHHcCCCeEEEEcchhhcCCCCCCCccccccccCCCCCCcchHHHHHHHHHHHHHHHHHhh-CCCEEEEeeccccCCCCC
Confidence            356789999999999999987777899987    666666 59999999999999998887 999999999999998532


Q ss_pred             CCCCCCCCCCCCChHH-HHHH----HHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEE
Q 028478           76 GKIGEDPRGIPNNLMP-FVTQ----VAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYN  150 (208)
Q Consensus        76 ~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~n  150 (208)
                            .....+.+++ ++.+    +..+.  ++.+++      ++++.++|+|++|+|++++.+++++.  ...+++||
T Consensus       179 ------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------~g~~~~~~i~v~Dva~a~~~~~~~~~--~~~~~~~n  242 (319)
T 4b8w_A          179 ------FNIEDGHVLPGLIHKVHLAKSSGS--ALTVWG------TGNPRRQFIYSLDLAQLFIWVLREYN--EVEPIILS  242 (319)
T ss_dssp             ------CCTTTSCHHHHHHHHHHHHHHHTC--CEEEES------CSCCEECEEEHHHHHHHHHHHHHHCC--CSSCEEEC
T ss_pred             ------CCCccccccHHHHHHHHHHhccCC--ceEEeC------CCCeeEEEEeHHHHHHHHHHHHhccc--cCCceEEE
Confidence                  2222234555 5555    56666  788888      89999999999999999999999842  23458999


Q ss_pred             ecCCCCcCHHHHHHHHHHHhCCCceEEEe
Q 028478          151 LGTGKGTSVLEMVAAFEKASGKVHIFALF  179 (208)
Q Consensus       151 i~~~~~~s~~e~~~~i~~~~g~~~~~~~~  179 (208)
                      +++++.+|+.|+++.+.+.+|.+.++...
T Consensus       243 i~~~~~~s~~e~~~~i~~~~g~~~~~~~~  271 (319)
T 4b8w_A          243 VGEEDEVSIKEAAEAVVEAMDFHGEVTFD  271 (319)
T ss_dssp             CCGGGCEEHHHHHHHHHHHTTCCSCEEEE
T ss_pred             ecCCCceeHHHHHHHHHHHhCCCCcEEeC
Confidence            99999999999999999999988776543

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.93  E-value=1.9e-24  Score=174.12  Aligned_cols=155  Identities=23%  Similarity=0.451  Sum_probs=133.5

Q ss_pred             ccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      ++.++++|||+||+.+||.....+++|+.+..|.+.|+.+|.++|.+++.++.++ +++++++||+++||+...      
T Consensus       102 ~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-g~~~~ilRp~~v~G~~~~------  174 (313)
T 3ehe_A          102 RKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALIESYCHTF-DMQAWIYRFANVIGRRST------  174 (313)
T ss_dssp             HHHTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHT-TCEEEEEECSCEESTTCC------
T ss_pred             HHcCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCEEEEeeccccCcCCC------
Confidence            4568899999999999998777889999999999999999999999999999988 999999999999998421      


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHHH
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLE  161 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e  161 (208)
                          .+.+..++.+...+.. ++.+++      ++++.++|+|++|+|++++.+++.    ...+++||+++++++|+.|
T Consensus       175 ----~~~~~~~~~~~~~~~~-~~~~~~------~g~~~~~~i~v~Dva~a~~~~~~~----~~~~~~~ni~~~~~~s~~e  239 (313)
T 3ehe_A          175 ----HGVIYDFIMKLKRNPE-ELEILG------NGEQNKSYIYISDCVDAMLFGLRG----DERVNIFNIGSEDQIKVKR  239 (313)
T ss_dssp             ----CSHHHHHHHHHHHCTT-EEEEST------TSCCEECCEEHHHHHHHHHHHTTC----CSSEEEEECCCSCCEEHHH
T ss_pred             ----cChHHHHHHHHHcCCC-ceEEeC------CCCeEEeEEEHHHHHHHHHHHhcc----CCCCceEEECCCCCeeHHH
Confidence                1223346777766642 777888      899999999999999999999985    3556999999999999999


Q ss_pred             HHHHHHHHhCCCceEEE
Q 028478          162 MVAAFEKASGKVHIFAL  178 (208)
Q Consensus       162 ~~~~i~~~~g~~~~~~~  178 (208)
                      +++.+.+.+|.++++..
T Consensus       240 ~~~~i~~~~g~~~~~~~  256 (313)
T 3ehe_A          240 IAEIVCEELGLSPRFRF  256 (313)
T ss_dssp             HHHHHHHHTTCCCEEEE
T ss_pred             HHHHHHHHhCCCCceEE
Confidence            99999999999876654

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.92  E-value=1.5e-24  Score=174.73  Aligned_cols=155  Identities=23%  Similarity=0.289  Sum_probs=134.0

Q ss_pred             CccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCC
Q 028478            1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         1 a~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      |++.++++|||+||..+||.....+++|+++..|.+.|+.+|.++|++++.++++. +++++++||+++||+...     
T Consensus        96 ~~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-g~~~~ilRp~~v~G~~~~-----  169 (311)
T 3m2p_A           96 CYENNISNIVYASTISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSRKK-GLCIKNLRFAHLYGFNEK-----  169 (311)
T ss_dssp             HHHTTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHHS-CCEEEEEEECEEECSCC------
T ss_pred             HHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHc-CCCEEEEeeCceeCcCCC-----
Confidence            35678999999999999997777789999999999999999999999999999887 999999999999998421     


Q ss_pred             CCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCH
Q 028478           81 DPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSV  159 (208)
Q Consensus        81 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~  159 (208)
                           ...++. ++..+..+.  ++.++|      ++++.++|+|++|+|++++.+++++    ..+++||+++++.+|+
T Consensus       170 -----~~~~~~~~~~~~~~~~--~~~~~g------~~~~~~~~v~v~Dva~a~~~~~~~~----~~~~~~~i~~~~~~s~  232 (311)
T 3m2p_A          170 -----NNYMINRFFRQAFHGE--QLTLHA------NSVAKREFLYAKDAAKSVIYALKQE----KVSGTFNIGSGDALTN  232 (311)
T ss_dssp             ------CCHHHHHHHHHHTCC--CEEESS------BCCCCEEEEEHHHHHHHHHHHTTCT----TCCEEEEECCSCEECH
T ss_pred             -----CCCHHHHHHHHHHcCC--CeEEec------CCCeEEceEEHHHHHHHHHHHHhcC----CCCCeEEeCCCCcccH
Confidence                 113455 666777776  777878      7899999999999999999999983    2569999999999999


Q ss_pred             HHHHHHHHHHhCCCceEEE
Q 028478          160 LEMVAAFEKASGKVHIFAL  178 (208)
Q Consensus       160 ~e~~~~i~~~~g~~~~~~~  178 (208)
                      .|+++.+.+.+|.+.++..
T Consensus       233 ~e~~~~i~~~~g~~~~~~~  251 (311)
T 3m2p_A          233 YEVANTINNAFGNKDNLLV  251 (311)
T ss_dssp             HHHHHHHHHHTTCTTCEEE
T ss_pred             HHHHHHHHHHhCCCCccee
Confidence            9999999999999876654

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.92  E-value=1.9e-24  Score=176.61  Aligned_cols=156  Identities=22%  Similarity=0.359  Sum_probs=133.4

Q ss_pred             CccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCC
Q 028478            1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         1 a~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      |++.++++|||+||+++||.....+++|+++..|.+.|+.+|.++|++++.+.+++ +++++++||+++||+...     
T Consensus       138 ~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-g~~~~ilRp~~v~G~~~~-----  211 (351)
T 3ruf_A          138 AKNAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNEIYAQVYARTY-GFKTIGLRYFNVFGRRQD-----  211 (351)
T ss_dssp             HHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH-CCCCEEEEECSEESTTCC-----
T ss_pred             HHHcCCCEEEEEecHHhcCCCCCCCCccCCCCCCCChhHHHHHHHHHHHHHHHHHh-CCCEEEEeeCceeCcCCC-----
Confidence            35678999999999999998777889999999999999999999999999998887 999999999999998522     


Q ss_pred             CCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCH
Q 028478           81 DPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSV  159 (208)
Q Consensus        81 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~  159 (208)
                       .......+++ ++..+..+.  ++.++|      ++++.++|+|++|+|++++.+++.+  ....+++||+++++.+|+
T Consensus       212 -~~~~~~~~~~~~~~~~~~~~--~~~~~g------~g~~~~~~i~v~Dva~a~~~~~~~~--~~~~~~~~ni~~~~~~s~  280 (351)
T 3ruf_A          212 -PNGAYAAVIPKWTAAMLKGD--DVYING------DGETSRDFCYIDNVIQMNILSALAK--DSAKDNIYNVAVGDRTTL  280 (351)
T ss_dssp             -CCSTTCCHHHHHHHHHHHTC--CCEEES------SSCCEECCEEHHHHHHHHHHHHTCC--GGGCSEEEEESCSCCEEH
T ss_pred             -CCcchhhHHHHHHHHHHcCC--CcEEeC------CCCeEEeeEEHHHHHHHHHHHHhhc--cccCCCEEEeCCCCcccH
Confidence             2222334555 777777777  678888      8999999999999999999998872  124569999999999999


Q ss_pred             HHHHHHHHHHhCCC
Q 028478          160 LEMVAAFEKASGKV  173 (208)
Q Consensus       160 ~e~~~~i~~~~g~~  173 (208)
                      .|+++.+.+.+|.+
T Consensus       281 ~e~~~~i~~~~g~~  294 (351)
T 3ruf_A          281 NELSGYIYDELNLI  294 (351)
T ss_dssp             HHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHhCcc
Confidence            99999999999983

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.92  E-value=8.5e-24  Score=171.96  Aligned_cols=175  Identities=59%  Similarity=1.052  Sum_probs=139.7

Q ss_pred             ccCCCCEEEEeccccccCCCCCCCCCCCCCCCC-CChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEA-MNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p-~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      ++.++++||++||..+||.....+++|+++..| .+.|+.+|.++|.+++.++.++++++++++||+++||++.++.+|.
T Consensus       112 ~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~  191 (338)
T 1udb_A          112 RAANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGE  191 (338)
T ss_dssp             HHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCC
T ss_pred             HhcCCCeEEEEccHHHhCCCCCCCcCcccCCCCCCChHHHHHHHHHHHHHHHHHhcCCCceEEEeeceecCCCccccccc
Confidence            456889999999999998766667899888765 7899999999999999988765479999999999999976666665


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHH
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVL  160 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~  160 (208)
                      .+......+++.+.+...+...++.+++.++...+|++.++|+|++|+|++++.+++.+.. ...+++||+++++++|+.
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~-~~~~~~yni~~~~~~s~~  270 (338)
T 1udb_A          192 DPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLAN-KPGVHIYNLGAGVGNSVL  270 (338)
T ss_dssp             CCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTT-CCEEEEEEESCSCCEEHH
T ss_pred             ccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeeeEEHHHHHHHHHHHHhhhhc-cCCCcEEEecCCCceeHH
Confidence            5444345677766666665445777877555555678899999999999999999987321 122379999999999999


Q ss_pred             HHHHHHHHHhCCCceEE
Q 028478          161 EMVAAFEKASGKVHIFA  177 (208)
Q Consensus       161 e~~~~i~~~~g~~~~~~  177 (208)
                      |+++.+.+.+|.+.+..
T Consensus       271 e~~~~i~~~~g~~~~~~  287 (338)
T 1udb_A          271 DVVNAFSKACGKPVNYH  287 (338)
T ss_dssp             HHHHHHHHHHTSCCCEE
T ss_pred             HHHHHHHHHhCCCCcce
Confidence            99999999999876554

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.92  E-value=1.8e-24  Score=174.07  Aligned_cols=159  Identities=28%  Similarity=0.421  Sum_probs=131.1

Q ss_pred             ccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      ++.++++|||+||+.+||.....+++|+.+..|.+.|+.+|.++|.+++.++.++ +++++++||+++||+...      
T Consensus       101 ~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~-g~~~~~lrp~~v~g~~~~------  173 (312)
T 3ko8_A          101 RQTGVRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCATYARLF-GVRCLAVRYANVVGPRLR------  173 (312)
T ss_dssp             HHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECEEECTTCC------
T ss_pred             HHcCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh-CCCEEEEeeccccCcCCC------
Confidence            4568899999999999998777889999999999999999999999999999888 999999999999998421      


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHHH
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLE  161 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e  161 (208)
                          .+.+..++.++..+. .++.+++      ++++.++|+|++|+|++++.+++++......+++||+++++.+|+.|
T Consensus       174 ----~~~~~~~~~~~~~~~-~~~~~~~------~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e  242 (312)
T 3ko8_A          174 ----HGVIYDFIMKLRRNP-NVLEVLG------DGTQRKSYLYVRDAVEATLAAWKKFEEMDAPFLALNVGNVDAVRVLD  242 (312)
T ss_dssp             ----SSHHHHHHHHHHHCT-TEEEEC----------CEECEEEHHHHHHHHHHHHHHHHHSCCSEEEEEESCSSCEEHHH
T ss_pred             ----CChHHHHHHHHHhCC-CCeEEcC------CCCeEEeeEEHHHHHHHHHHHHHhccccCCCCcEEEEcCCCceeHHH
Confidence                122334676776664 2777888      88999999999999999999998732223556999999999999999


Q ss_pred             HHHHHHHHhCCCceEEE
Q 028478          162 MVAAFEKASGKVHIFAL  178 (208)
Q Consensus       162 ~~~~i~~~~g~~~~~~~  178 (208)
                      +++.+.+.+|.+.++..
T Consensus       243 ~~~~i~~~~g~~~~~~~  259 (312)
T 3ko8_A          243 IAQIVAEVLGLRPEIRL  259 (312)
T ss_dssp             HHHHHHHHHTCCCEEEE
T ss_pred             HHHHHHHHhCCCCceee
Confidence            99999999999876654

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.92  E-value=9.3e-24  Score=172.27  Aligned_cols=175  Identities=66%  Similarity=1.117  Sum_probs=139.3

Q ss_pred             ccCCCCEEEEeccccccCCCCCCCCCCCCCCCC-CChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEA-MNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p-~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      ++.++++|||+||..+||.....+++|+++..| .+.|+.+|.++|.+++.++++.++++++++||+++||+..++.+|.
T Consensus       120 ~~~~~~~iv~~SS~~~~g~~~~~~~~E~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~  199 (348)
T 1ek6_A          120 KAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGE  199 (348)
T ss_dssp             HHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCC
T ss_pred             HHhCCCEEEEECcHHHhCCCCCCCcCCCCCCCCCCCchHHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCc
Confidence            456889999999999999766678999998888 8999999999999999987652259999999999999976665555


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHH
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVL  160 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~  160 (208)
                      ........+++.+.+...+...++.++|.++..+++++.++|+|++|+|++++.+++++.. ...+++||+++++.+|+.
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~-~~g~~~~ni~~~~~~s~~  278 (348)
T 1ek6_A          200 DPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKE-QCGCRIYNLGTGTGYSVL  278 (348)
T ss_dssp             CCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTT-TCCEEEEEECCSCCEEHH
T ss_pred             CcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCCCceEEeeEEHHHHHHHHHHHHhcccc-cCCceEEEeCCCCCccHH
Confidence            4443345677766565554444788877444444678899999999999999999987421 122389999999999999


Q ss_pred             HHHHHHHHHhCCCceEE
Q 028478          161 EMVAAFEKASGKVHIFA  177 (208)
Q Consensus       161 e~~~~i~~~~g~~~~~~  177 (208)
                      |+++.+.+.+|.+.+..
T Consensus       279 e~~~~i~~~~g~~~~~~  295 (348)
T 1ek6_A          279 QMVQAMEKASGKKIPYK  295 (348)
T ss_dssp             HHHHHHHHHHCSCCCEE
T ss_pred             HHHHHHHHHhCCCCcee
Confidence            99999999999876654

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.92  E-value=4.4e-24  Score=174.18  Aligned_cols=152  Identities=32%  Similarity=0.430  Sum_probs=131.8

Q ss_pred             CccCCCCEEEEeccccccCCC-CCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCC
Q 028478            1 MAAHGCKNLVFSSSATVYGWP-KVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIG   79 (208)
Q Consensus         1 a~~~~vk~~i~~SS~~vyg~~-~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~   79 (208)
                      |++.++++|||+||.++||.. ...+++|+++..|.+.|+.+|.++|++++.+++++ +++++++||+++||+...    
T Consensus       136 ~~~~~~~~~v~~SS~~vy~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-g~~~~ilRp~~v~G~~~~----  210 (346)
T 4egb_A          136 VKKYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKASADMIALAYYKTY-QLPVIVTRCSNNYGPYQY----  210 (346)
T ss_dssp             HHHSTTSEEEEEEEGGGGCCCCSSCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-CCCEEEEEECEEESTTCC----
T ss_pred             HHhcCCCEEEEeCchHHhCCCCcCCCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHh-CCCEEEEeecceeCcCCC----
Confidence            356789999999999999965 45689999999999999999999999999999887 999999999999998421    


Q ss_pred             CCCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcC
Q 028478           80 EDPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTS  158 (208)
Q Consensus        80 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s  158 (208)
                            ...++. ++..+..+.  ++.+++      ++++.++|+|++|+|++++.+++++    ..+++||+++++.+|
T Consensus       211 ------~~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~~i~v~Dva~a~~~~~~~~----~~g~~~~i~~~~~~s  272 (346)
T 4egb_A          211 ------PEKLIPLMVTNALEGK--KLPLYG------DGLNVRDWLHVTDHCSAIDVVLHKG----RVGEVYNIGGNNEKT  272 (346)
T ss_dssp             ------TTSHHHHHHHHHHTTC--CCEEET------TSCCEECEEEHHHHHHHHHHHHHHC----CTTCEEEECCSCCEE
T ss_pred             ------ccchHHHHHHHHHcCC--CceeeC------CCCeEEeeEEHHHHHHHHHHHHhcC----CCCCEEEECCCCcee
Confidence                  124555 667777776  678888      8999999999999999999999983    356899999999999


Q ss_pred             HHHHHHHHHHHhCCCce
Q 028478          159 VLEMVAAFEKASGKVHI  175 (208)
Q Consensus       159 ~~e~~~~i~~~~g~~~~  175 (208)
                      +.|+++.+.+.+|.+.+
T Consensus       273 ~~e~~~~i~~~~g~~~~  289 (346)
T 4egb_A          273 NVEVVEQIITLLGKTKK  289 (346)
T ss_dssp             HHHHHHHHHHHHTCCGG
T ss_pred             HHHHHHHHHHHhCCCcc
Confidence            99999999999998754

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.92  E-value=2.5e-24  Score=173.49  Aligned_cols=152  Identities=27%  Similarity=0.481  Sum_probs=132.5

Q ss_pred             ccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCc-cEEEEecccccCCCCCCCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEW-KIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~-~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      ++.++++|||+||..+|+.....+++|+++..|.+.|+.+|.++|++++.++.++ ++ +++++||+++||+...     
T Consensus       107 ~~~~v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~ilRp~~v~G~~~~-----  180 (321)
T 3vps_A          107 TSVGVPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAASKVGLEMVAGAHQRAS-VAPEVGIVRFFNVYGPGER-----  180 (321)
T ss_dssp             HHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHSS-SSCEEEEEEECEEECTTCC-----
T ss_pred             HHcCCCeEEEecCHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc-CCCceEEEEeccccCcCCC-----
Confidence            4668999999999999998777789999999999999999999999999999887 89 9999999999998421     


Q ss_pred             CCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCH
Q 028478           81 DPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSV  159 (208)
Q Consensus        81 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~  159 (208)
                           .+.++. ++..+..+.  ++.+++      ++++.++|+|++|+|++++.+++++    ..+ +||+++++.+|+
T Consensus       181 -----~~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~~v~v~Dva~~~~~~~~~~----~~g-~~~i~~~~~~s~  242 (321)
T 3vps_A          181 -----PDALVPRLCANLLTRN--ELPVEG------DGEQRRDFTYITDVVDKLVALANRP----LPS-VVNFGSGQSLSV  242 (321)
T ss_dssp             -----TTSHHHHHHHHHHHHS--EEEEET------TSCCEECEEEHHHHHHHHHHGGGSC----CCS-EEEESCSCCEEH
T ss_pred             -----CCChHHHHHHHHHcCC--CeEEeC------CCCceEceEEHHHHHHHHHHHHhcC----CCC-eEEecCCCcccH
Confidence                 133555 667777776  788888      8999999999999999999999983    334 999999999999


Q ss_pred             HHHHHHHHHHhCCCceEEE
Q 028478          160 LEMVAAFEKASGKVHIFAL  178 (208)
Q Consensus       160 ~e~~~~i~~~~g~~~~~~~  178 (208)
                      .|+++.+. .+|.+.++..
T Consensus       243 ~e~~~~i~-~~g~~~~~~~  260 (321)
T 3vps_A          243 NDVIRILQ-ATSPAAEVAR  260 (321)
T ss_dssp             HHHHHHHH-TTCTTCEEEE
T ss_pred             HHHHHHHH-HhCCCCcccc
Confidence            99999999 9999877653

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.91  E-value=1.7e-23  Score=173.72  Aligned_cols=174  Identities=40%  Similarity=0.666  Sum_probs=137.1

Q ss_pred             ccCCCCEEEEeccccccCCCC-------CCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWPK-------VVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHP   74 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~-------~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~   74 (208)
                      ++.++++|||+||.++||...       ..+++|+++..|.+.|+.+|.++|.+++.++.++ +++++++||+++||+..
T Consensus       132 ~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~-gi~~~ilRp~~v~G~~~  210 (397)
T 1gy8_A          132 LLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY-GIKGICLRYFNACGAHE  210 (397)
T ss_dssp             HHTTCCEEEEEEEGGGTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECEEECCCT
T ss_pred             HHhCCCEEEEECCHHHhCCCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH-CCcEEEEeccceeCCCc
Confidence            456889999999999998655       5689999999999999999999999999998887 99999999999999976


Q ss_pred             CCCCCCCCCCCCCChHHHHH-----HHHhCCC----------CeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhc
Q 028478           75 SGKIGEDPRGIPNNLMPFVT-----QVAVGRR----------PELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKL  139 (208)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  139 (208)
                      ++.+|..... ...+++.+.     ++..+..          .++.++|.++..+++++.++|+|++|+|++++.+++.+
T Consensus       211 ~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~  289 (397)
T 1gy8_A          211 DGDIGEHYQG-STHLIPIILGRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYV  289 (397)
T ss_dssp             TSSCSCCSTT-CCSHHHHHHHHHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHH
T ss_pred             cccccccccc-hhHHHHHHHHHHHHHHHhcCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcc
Confidence            5555443221 345666444     5555542          35778775555556889999999999999999999873


Q ss_pred             CCCC--CCC---ceEEecCCCCcCHHHHHHHHHHHhCCCceEE
Q 028478          140 DDPK--IGC---EVYNLGTGKGTSVLEMVAAFEKASGKVHIFA  177 (208)
Q Consensus       140 ~~~~--~~~---~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~  177 (208)
                      ...+  ..+   ++||+++++++|+.|+++.+.+.+|.+.++.
T Consensus       290 ~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~  332 (397)
T 1gy8_A          290 EKLGPNDKSKYFSVFNLGTSRGYSVREVIEVARKTTGHPIPVR  332 (397)
T ss_dssp             HTCCTTTGGGSEEEEEESCSCCEEHHHHHHHHHHHHCCCCCEE
T ss_pred             cccccccccCCCcEEEeCCCCcccHHHHHHHHHHHhCCCCCee
Confidence            2111  013   7999999999999999999999999876654

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.90  E-value=1.1e-22  Score=165.38  Aligned_cols=150  Identities=29%  Similarity=0.438  Sum_probs=128.3

Q ss_pred             ccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      ++.++++|||+||.++||.....+++|+++..|.+.|+.+|.++|.+++.+++++ +++++++||+++||+...      
T Consensus       115 ~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-g~~~~ilrp~~v~G~~~~------  187 (337)
T 1r6d_A          115 VDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTY-GLDVRITRCCNNYGPYQH------  187 (337)
T ss_dssp             HHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-CCCEEEEEECEEECTTCC------
T ss_pred             HHcCCCEEEEecchHHhCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHH-CCCEEEEEeeeeECCCCC------
Confidence            4568899999999999996656678999999999999999999999999998887 899999999999998421      


Q ss_pred             CCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHH
Q 028478           82 PRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVL  160 (208)
Q Consensus        82 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~  160 (208)
                          ...+++ ++..+..+.  ++.+++      ++++.++|+|++|+|++++.+++.+    ..+++||++++..+|+.
T Consensus       188 ----~~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~~i~v~Dva~a~~~~~~~~----~~g~~~~v~~~~~~s~~  251 (337)
T 1r6d_A          188 ----PEKLIPLFVTNLLDGG--TLPLYG------DGANVREWVHTDDHCRGIALVLAGG----RAGEIYHIGGGLELTNR  251 (337)
T ss_dssp             ----TTSHHHHHHHHHHTTC--CEEEET------TSCCEEEEEEHHHHHHHHHHHHHHC----CTTCEEEECCCCEEEHH
T ss_pred             ----CCChHHHHHHHHhcCC--CcEEeC------CCCeeEeeEeHHHHHHHHHHHHhCC----CCCCEEEeCCCCCccHH
Confidence                123444 666666666  677788      8899999999999999999999873    35689999999999999


Q ss_pred             HHHHHHHHHhCCCc
Q 028478          161 EMVAAFEKASGKVH  174 (208)
Q Consensus       161 e~~~~i~~~~g~~~  174 (208)
                      |+++.+.+.+|.+.
T Consensus       252 e~~~~i~~~~g~~~  265 (337)
T 1r6d_A          252 ELTGILLDSLGADW  265 (337)
T ss_dssp             HHHHHHHHHHTCCG
T ss_pred             HHHHHHHHHhCCCc
Confidence            99999999999874

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.90  E-value=1.2e-22  Score=163.44  Aligned_cols=154  Identities=33%  Similarity=0.523  Sum_probs=128.5

Q ss_pred             ccCCCCEEEEeccc-cccCC-CCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCC
Q 028478            2 AAHGCKNLVFSSSA-TVYGW-PKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIG   79 (208)
Q Consensus         2 ~~~~vk~~i~~SS~-~vyg~-~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~   79 (208)
                      ++.++++||++||. .+||. ....+.+|+++..|.+.|+.+|.++|.+++.+++++ +++++++||+++||+...    
T Consensus       105 ~~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~lrp~~v~Gp~~~----  179 (311)
T 2p5y_A          105 RQYGVEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFEHYLSVYGQSY-GLKWVSLRYGNVYGPRQD----  179 (311)
T ss_dssp             HHTTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-CCCEEEEEECEEECTTCC----
T ss_pred             HHhCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHHc-CCCEEEEeeccccCcCCC----
Confidence            45688999999998 99986 445678999988899999999999999999998887 999999999999998421    


Q ss_pred             CCCCCCCCChHH-HHHHHHhCCCCeeEEE-----ccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecC
Q 028478           80 EDPRGIPNNLMP-FVTQVAVGRRPELTVF-----GTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGT  153 (208)
Q Consensus        80 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~  153 (208)
                        ... ...+++ ++.++..+.  ++.++     +      ++.+.++|+|++|+|++++.+++.+      +++||+++
T Consensus       180 --~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~------~g~~~~~~i~v~Dva~a~~~~~~~~------~~~~~i~~  242 (311)
T 2p5y_A          180 --PHG-EAGVVAIFAERVLKGL--PVTLYARKTPG------DEGCVRDYVYVGDVAEAHALALFSL------EGIYNVGT  242 (311)
T ss_dssp             --SSS-TTHHHHHHHHHHHHTC--CEEEECSSSTT------SCCCEECEEEHHHHHHHHHHHHHHC------CEEEEESC
T ss_pred             --CCC-cCcHHHHHHHHHHcCC--CcEEEecccCC------CCCeEEeeEEHHHHHHHHHHHHhCC------CCEEEeCC
Confidence              111 123444 566666666  66777     7      7889999999999999999999882      58999999


Q ss_pred             CCCcCHHHHHHHHHHHhCCCceEE
Q 028478          154 GKGTSVLEMVAAFEKASGKVHIFA  177 (208)
Q Consensus       154 ~~~~s~~e~~~~i~~~~g~~~~~~  177 (208)
                      +..+|+.|+++.+.+.+|.+.++.
T Consensus       243 ~~~~s~~e~~~~i~~~~g~~~~~~  266 (311)
T 2p5y_A          243 GEGHTTREVLMAVAEAAGKAPEVQ  266 (311)
T ss_dssp             SCCEEHHHHHHHHHHHHTCCCCEE
T ss_pred             CCCccHHHHHHHHHHHhCCCCCce
Confidence            999999999999999999887654

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.90  E-value=1.4e-22  Score=165.88  Aligned_cols=157  Identities=23%  Similarity=0.361  Sum_probs=130.1

Q ss_pred             ccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      ++.++++|||+||..+|+.....+++|+++..|.+.|+.+|.++|.+++.+++++ +++++++||+++||+...      
T Consensus       141 ~~~~~~~~v~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-g~~~~ilRp~~v~G~~~~------  213 (352)
T 1sb8_A          141 RDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCY-GFSTIGLRYFNVFGRRQD------  213 (352)
T ss_dssp             HHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH-CCCCEEEEECCEECTTCC------
T ss_pred             HHcCCCEEEEeccHHhcCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc-CCCEEEEEECceeCcCCC------
Confidence            4568899999999999997666789999999999999999999999999998887 899999999999998422      


Q ss_pred             CCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHH
Q 028478           82 PRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVL  160 (208)
Q Consensus        82 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~  160 (208)
                      .......+++ ++..+..+.  ++.+++      ++++.++|+|++|+|++++.++...  ....+++||+++++.+|+.
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~--~~~~~g------~g~~~~~~i~v~Dva~a~~~~~~~~--~~~~~~~~ni~~~~~~s~~  283 (352)
T 1sb8_A          214 PNGAYAAVIPKWTSSMIQGD--DVYING------DGETSRDFCYIENTVQANLLAATAG--LDARNQVYNIAVGGRTSLN  283 (352)
T ss_dssp             CCSTTCCHHHHHHHHHHHTC--CCEEES------SSCCEECCEEHHHHHHHHHHHHTCC--GGGCSEEEEESCSCCEEHH
T ss_pred             CCcchhhHHHHHHHHHHCCC--CcEEeC------CCCceEeeEEHHHHHHHHHHHHhcc--ccCCCceEEeCCCCCccHH
Confidence            1111224454 666677776  667778      8899999999999999999988762  1245699999999999999


Q ss_pred             HHHHHHHHHh---CCCce
Q 028478          161 EMVAAFEKAS---GKVHI  175 (208)
Q Consensus       161 e~~~~i~~~~---g~~~~  175 (208)
                      |+++.+.+.+   |.+.+
T Consensus       284 e~~~~i~~~~~~~g~~~~  301 (352)
T 1sb8_A          284 QLFFALRDGLAENGVSYH  301 (352)
T ss_dssp             HHHHHHHHHHHHTTCCCC
T ss_pred             HHHHHHHHHHHhcCCCCC
Confidence            9999999999   88754

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.90  E-value=9.4e-23  Score=164.57  Aligned_cols=164  Identities=21%  Similarity=0.343  Sum_probs=128.2

Q ss_pred             ccCCCCEEEEeccccccCCCCCCCCCCCC----CCCCC-ChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWPKVVPCTEEF----PLEAM-NPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSG   76 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~~~~~~E~~----~~~p~-~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~   76 (208)
                      ++.++++|||+||..+||.....+++|++    +..|. +.|+.+|.++|.+++.+++++ +++++++||+++||+... 
T Consensus        95 ~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~ilrp~~v~G~~~~-  172 (321)
T 1e6u_A           95 HQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQY-GRDYRSVMPTNLYGPHDN-  172 (321)
T ss_dssp             HHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECEEESTTCC-
T ss_pred             HHhCCCeEEEEccHHHcCCCCCCCcCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHh-CCCEEEEEeCCcCCcCCC-
Confidence            45789999999999999976667888887    55554 589999999999999998877 899999999999998532 


Q ss_pred             CCCCCCCCCCCChHH-HHHHHHhC---CCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCC-----CCCCc
Q 028478           77 KIGEDPRGIPNNLMP-FVTQVAVG---RRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDP-----KIGCE  147 (208)
Q Consensus        77 ~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~-----~~~~~  147 (208)
                           .....+.++. ++..+..+   +..++.+++      ++++.++|+|++|+|++++.+++++...     ...++
T Consensus       173 -----~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~------~g~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~  241 (321)
T 1e6u_A          173 -----FHPSNSHVIPALLRRFHEATAQKAPDVVVWG------SGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLS  241 (321)
T ss_dssp             -----CCTTCSSHHHHHHHHHHHHHHHTCSEEEEES------CSCCEECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBC
T ss_pred             -----CCCCCCccHHHHHHHHHHhhhcCCCceEEcC------CCCEEEEeEEHHHHHHHHHHHHhCcccccccccccCCc
Confidence                 1111234554 55555432   112777888      8999999999999999999999873110     01258


Q ss_pred             eEEecCCCCcCHHHHHHHHHHHhCCCceEEE
Q 028478          148 VYNLGTGKGTSVLEMVAAFEKASGKVHIFAL  178 (208)
Q Consensus       148 ~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~  178 (208)
                      +||+++++++|+.|+++.+.+.+|.+.++.+
T Consensus       242 ~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~  272 (321)
T 1e6u_A          242 HINVGTGVDCTIRELAQTIAKVVGYKGRVVF  272 (321)
T ss_dssp             CEEESCSCCEEHHHHHHHHHHHHTCCSEEEE
T ss_pred             eEEeCCCCCccHHHHHHHHHHHhCCCCceEe
Confidence            9999999999999999999999998876553

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.89  E-value=3.1e-23  Score=168.32  Aligned_cols=154  Identities=18%  Similarity=0.174  Sum_probs=124.9

Q ss_pred             ccCCC-CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCC
Q 028478            2 AAHGC-KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         2 ~~~~v-k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      ++.++ ++||++||.++||.....+++|+++..|.+.|+.+|.++|.+++.+++++ +++++++||+++||+...     
T Consensus       125 ~~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~-~~~~~i~r~~~v~Gp~~~-----  198 (335)
T 1rpn_A          125 RQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESF-GLHASSGILFNHESPLRG-----  198 (335)
T ss_dssp             HHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-CCCEEEEEECCEECTTSC-----
T ss_pred             HHhCCCCeEEEEeCHHHhCCCCCCCCCcccCCCCCChhHHHHHHHHHHHHHHHHHc-CCcEEEEeeCcccCCCCC-----
Confidence            34565 89999999999997666789999999999999999999999999998887 899999999999998421     


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHH
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVL  160 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~  160 (208)
                       .......+..++..+..+.. +...+|      ++++.++|+|++|+|++++.+++++    . +++||+++++.+|+.
T Consensus       199 -~~~~~~~~~~~~~~~~~g~~-~~~~~g------~g~~~~~~i~v~Dva~a~~~~~~~~----~-~~~~ni~~~~~~s~~  265 (335)
T 1rpn_A          199 -IEFVTRKVTDAVARIKLGKQ-QELRLG------NVDAKRDWGFAGDYVEAMWLMLQQD----K-ADDYVVATGVTTTVR  265 (335)
T ss_dssp             -TTSHHHHHHHHHHHHHTTSC-SCEEES------CTTCEEECEEHHHHHHHHHHHHHSS----S-CCCEEECCSCEEEHH
T ss_pred             -CCcchHHHHHHHHHHHcCCC-ceEEeC------CCcceeceEEHHHHHHHHHHHHhcC----C-CCEEEEeCCCCccHH
Confidence             11000112235556666653 334567      7899999999999999999999883    2 389999999999999


Q ss_pred             HHHHHHHHHhCCCc
Q 028478          161 EMVAAFEKASGKVH  174 (208)
Q Consensus       161 e~~~~i~~~~g~~~  174 (208)
                      |+++.+.+.+|.+.
T Consensus       266 e~~~~i~~~~g~~~  279 (335)
T 1rpn_A          266 DMCQIAFEHVGLDY  279 (335)
T ss_dssp             HHHHHHHHTTTCCG
T ss_pred             HHHHHHHHHhCCCc
Confidence            99999999999864

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.89  E-value=4.7e-23  Score=165.35  Aligned_cols=151  Identities=25%  Similarity=0.336  Sum_probs=111.7

Q ss_pred             ccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      ++.++ +||++||..+||.....+++|+++..|.+.|+.+|.++|.+++.+.+++ +++++++||+++||+...      
T Consensus       105 ~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~-g~~~~~lrp~~v~G~~~~------  176 (310)
T 1eq2_A          105 LEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEA-NSQIVGFRYFNVYGPREG------  176 (310)
T ss_dssp             HHHTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHHHHHHGGGC-SSCEEEEEECEEESSSCG------
T ss_pred             HHcCC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc-CCCEEEEeCCcEECcCCC------
Confidence            45678 9999999999997666688999999999999999999999999998887 999999999999998421      


Q ss_pred             CCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcc-eeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCH
Q 028478           82 PRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTG-VRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSV  159 (208)
Q Consensus        82 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~  159 (208)
                      .......++. ++..+..++  ++.+++      ++++ .++|+|++|+|++++.+++++    . +++||+++++.+|+
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~--~~~~~~------~g~~~~~~~i~v~Dva~~~~~~~~~~----~-~~~~~i~~~~~~s~  243 (310)
T 1eq2_A          177 HKGSMASVAFHLNTQLNNGE--SPKLFE------GSENFKRDFVYVGDVADVNLWFLENG----V-SGIFNLGTGRAESF  243 (310)
T ss_dssp             GGGGGSCHHHHHHHHHHC---------------------CBCEEEHHHHHHHHHHHHHHC----C-CEEEEESCSCCBCH
T ss_pred             CCCccchHHHHHHHHHHcCC--CcEEec------CCCcceEccEEHHHHHHHHHHHHhcC----C-CCeEEEeCCCccCH
Confidence            1111234555 666666665  566677      7888 999999999999999999983    2 68999999999999


Q ss_pred             HHHHHHHHHHhCCC
Q 028478          160 LEMVAAFEKASGKV  173 (208)
Q Consensus       160 ~e~~~~i~~~~g~~  173 (208)
                      .|+++.+.+.+|.+
T Consensus       244 ~e~~~~i~~~~g~~  257 (310)
T 1eq2_A          244 QAVADATLAYHKKG  257 (310)
T ss_dssp             HHHHHHC-------
T ss_pred             HHHHHHHHHHcCCC
Confidence            99999999999986

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.89  E-value=9.3e-23  Score=166.38  Aligned_cols=158  Identities=25%  Similarity=0.421  Sum_probs=131.0

Q ss_pred             ccCCCCEEEEeccccccCC--CCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEeccccc---------
Q 028478            2 AAHGCKNLVFSSSATVYGW--PKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPV---------   70 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~--~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~---------   70 (208)
                      ++.++++|||+||+++||.  ....+++|+++..|.+.|+.+|.++|++++.+++.+ +++++++||+++|         
T Consensus       114 ~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~ilRp~~v~~~~~~~~~~  192 (347)
T 4id9_A          114 SAAGVRRFVFASSGEVYPENRPEFLPVTEDHPLCPNSPYGLTKLLGEELVRFHQRSG-AMETVILRFSHTQDATELLDED  192 (347)
T ss_dssp             HHTTCSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS-SSEEEEEEECEEECGGGTTCTT
T ss_pred             HHcCCCeEEEECCHHHhCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHhc-CCceEEEccceEeecccccccc
Confidence            4678999999999999997  566689999999999999999999999999999887 9999999999999         


Q ss_pred             ----CCCCCCCCCCCCCC-------CCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeee----eeHHHHHHHHHH
Q 028478           71 ----GAHPSGKIGEDPRG-------IPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDY----IHVIDLADGHIA  134 (208)
Q Consensus        71 ----G~~~~~~~~~~~~~-------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----i~v~D~a~~~~~  134 (208)
                          |++..      ...       ....++. ++..+..+.  ++.+++      ++++.++|    +|++|+|++++.
T Consensus       193 ~~~~Gp~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g------~~~~~~~~~~~~i~v~Dva~ai~~  258 (347)
T 4id9_A          193 SFFSGPRFF------LRPRIHQQQNFGNAAIAELLQSRDIGE--PSHILA------RNENGRPFRMHITDTRDMVAGILL  258 (347)
T ss_dssp             SSSHHHHHB------HHHHHHHHHHHTCHHHHHHHHHHCCSS--CCEEEE------ECTTCCBCEECEEEHHHHHHHHHH
T ss_pred             cccCCCCcc------cccccccccccchhHHHHHHHHHHcCC--CeEEeC------CCCcccCCccCcEeHHHHHHHHHH
Confidence                54210      000       0123444 566666665  677888      78999999    999999999999


Q ss_pred             HhhhcCCCCCCCceEEecCCCCcCHHHHHHHHHHHhCCCceEE
Q 028478          135 ALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKVHIFA  177 (208)
Q Consensus       135 ~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~  177 (208)
                      +++++.   ..+++||+++++.+|+.|+++.+.+.+|.+.++.
T Consensus       259 ~~~~~~---~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~  298 (347)
T 4id9_A          259 ALDHPE---AAGGTFNLGADEPADFAALLPKIAALTGLPIVTV  298 (347)
T ss_dssp             HHHCGG---GTTEEEEESCSSCEEHHHHHHHHHHHHCCCEEEE
T ss_pred             HhcCcc---cCCCeEEECCCCcccHHHHHHHHHHHhCCCCcee
Confidence            999842   3469999999999999999999999999987664

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.89  E-value=3e-22  Score=164.13  Aligned_cols=151  Identities=24%  Similarity=0.330  Sum_probs=127.2

Q ss_pred             ccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      ++.++ +||++||..+||.....+++|+++..|.+.|+.+|.++|.+++.+..++ +++++++||+++||+...      
T Consensus       152 ~~~~~-r~V~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-g~~~~ilRp~~v~Gp~~~------  223 (357)
T 2x6t_A          152 LEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVFGYSKFLFDEYVRQILPEA-NSQIVGFRYFNVYGPREG------  223 (357)
T ss_dssp             HHHTC-CEEEEEEGGGGCSCSSCCCSSGGGCCCSSHHHHHHHHHHHHHHHHGGGC-SSCEEEEEECEEESSSCT------
T ss_pred             HHcCC-eEEEEcchHHhCCCCCCCcCCcCCCCCCChhHHHHHHHHHHHHHHHHHc-CCCEEEEecCeEECCCCC------
Confidence            34578 9999999999997666689999999999999999999999999998887 899999999999998421      


Q ss_pred             CCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcc-eeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCH
Q 028478           82 PRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTG-VRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSV  159 (208)
Q Consensus        82 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~  159 (208)
                      .......++. ++..+..+.  ++.+++      ++++ .++|+|++|+|++++.+++++    . +++||+++++.+|+
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~~~i~v~Dva~ai~~~~~~~----~-~~~~~i~~~~~~s~  290 (357)
T 2x6t_A          224 HKGSMASVAFHLNTQLNNGE--SPKLFE------GSENFKRDFVYVGDVADVNLWFLENG----V-SGIFNLGTGRAESF  290 (357)
T ss_dssp             TCGGGSCHHHHHHHHHHTTC--CCEEET------TGGGCEECEEEHHHHHHHHHHHHHHC----C-CEEEEESCSCCEEH
T ss_pred             CCcccchHHHHHHHHHHcCC--CcEEeC------CCCcceEccEEHHHHHHHHHHHHhcC----C-CCeEEecCCCcccH
Confidence            1111234555 666666666  667777      7888 999999999999999999983    2 68999999999999


Q ss_pred             HHHHHHHHHHhCCC
Q 028478          160 LEMVAAFEKASGKV  173 (208)
Q Consensus       160 ~e~~~~i~~~~g~~  173 (208)
                      .|+++.+.+.+|.+
T Consensus       291 ~e~~~~i~~~~g~~  304 (357)
T 2x6t_A          291 QAVADATLAYHKKG  304 (357)
T ss_dssp             HHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHcCCC
Confidence            99999999999987

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.89  E-value=3.4e-22  Score=161.30  Aligned_cols=152  Identities=22%  Similarity=0.282  Sum_probs=126.1

Q ss_pred             CCCEEEEeccccccCCC--CCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCCCC
Q 028478            5 GCKNLVFSSSATVYGWP--KVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGEDP   82 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~~--~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~~~   82 (208)
                      ++++||++||..+||..  ...+++|+++..|.+.|+.+|.++|.+++.+++++ +++++++||+++||+...      .
T Consensus       117 ~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-gi~~~ilrp~~v~g~~~~------~  189 (321)
T 2pk3_A          117 LDCRILTIGSSEEYGMILPEESPVSEENQLRPMSPYGVSKASVGMLARQYVKAY-GMDIIHTRTFNHIGPGQS------L  189 (321)
T ss_dssp             CCCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCCSHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECEEECTTCC------T
T ss_pred             CCCeEEEEccHHhcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHc-CCCEEEEEeCcccCcCCC------C
Confidence            58899999999999865  56689999999999999999999999999998887 999999999999998421      1


Q ss_pred             CCCCCChHH-HHHHHHh---CCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcC
Q 028478           83 RGIPNNLMP-FVTQVAV---GRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTS  158 (208)
Q Consensus        83 ~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s  158 (208)
                          ..+++ ++..+..   +...++.+++      ++++.++|+|++|+|++++.+++.+    ..+++||+++++.+|
T Consensus       190 ----~~~~~~~~~~~~~~~~g~~~~~~~~~------~~~~~~~~v~v~Dva~a~~~~~~~~----~~g~~~~i~~~~~~s  255 (321)
T 2pk3_A          190 ----GFVTQDFAKQIVDIEMEKQEPIIKVG------NLEAVRDFTDVRDIVQAYWLLSQYG----KTGDVYNVCSGIGTR  255 (321)
T ss_dssp             ----TSHHHHHHHHHHHHHTTSSCSEEEES------CSSCEEEEEEHHHHHHHHHHHHHHC----CTTCEEEESCSCEEE
T ss_pred             ----CchHHHHHHHHHHHhcCCCCCeEEeC------CCCcEEeeEEHHHHHHHHHHHHhCC----CCCCeEEeCCCCCee
Confidence                22343 4444444   5201566777      7889999999999999999999983    345899999999999


Q ss_pred             HHHHHHHHHHHhCCCceEE
Q 028478          159 VLEMVAAFEKASGKVHIFA  177 (208)
Q Consensus       159 ~~e~~~~i~~~~g~~~~~~  177 (208)
                      +.|+++.+.+.+|.+.++.
T Consensus       256 ~~e~~~~i~~~~g~~~~~~  274 (321)
T 2pk3_A          256 IQDVLDLLLAMANVKIDTE  274 (321)
T ss_dssp             HHHHHHHHHHHSSSCCEEE
T ss_pred             HHHHHHHHHHHhCCCCcee
Confidence            9999999999999876654

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.89  E-value=5.6e-22  Score=160.97  Aligned_cols=145  Identities=26%  Similarity=0.351  Sum_probs=122.2

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGEDPRGIP   86 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~~~~~~~   86 (208)
                      ++||++||.++||.....+++|+++..|.+.|+.+|.++|.+++.++.++ +++++++||+++||+..      .    .
T Consensus       120 ~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~ilrp~~v~g~~~------~----~  188 (336)
T 2hun_A          120 VRFVHVSTDEVYGDILKGSFTENDRLMPSSPYSATKAASDMLVLGWTRTY-NLNASITRCTNNYGPYQ------F----P  188 (336)
T ss_dssp             SEEEEEEEGGGGCCCSSSCBCTTBCCCCCSHHHHHHHHHHHHHHHHHHHT-TCEEEEEEECEEESTTC------C----T
T ss_pred             cEEEEeccHHHHCCCCCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh-CCCEEEEeeeeeeCcCC------C----c
Confidence            69999999999997656689999999999999999999999999998887 99999999999999842      1    1


Q ss_pred             CChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHHHHHHH
Q 028478           87 NNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAA  165 (208)
Q Consensus        87 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~  165 (208)
                      ..+++ ++..+..+.  ++.+++      ++.+.++|+|++|+|++++.+++.    ...+++||++++..+|+.|+++.
T Consensus       189 ~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~~i~v~Dva~~~~~~~~~----~~~g~~~~v~~~~~~s~~e~~~~  256 (336)
T 2hun_A          189 EKLIPKTIIRASLGL--KIPIYG------TGKNVRDWLYVEDHVRAIELVLLK----GESREIYNISAGEEKTNLEVVKI  256 (336)
T ss_dssp             TSHHHHHHHHHHTTC--CEEEET------C---CEEEEEHHHHHHHHHHHHHH----CCTTCEEEECCSCEECHHHHHHH
T ss_pred             CchHHHHHHHHHcCC--CceEeC------CCCceeeeEEHHHHHHHHHHHHhC----CCCCCEEEeCCCCcccHHHHHHH
Confidence            23444 666666666  677888      888999999999999999999987    24568999999999999999999


Q ss_pred             HHHHhCCCc
Q 028478          166 FEKASGKVH  174 (208)
Q Consensus       166 i~~~~g~~~  174 (208)
                      +.+.+|.+.
T Consensus       257 i~~~~g~~~  265 (336)
T 2hun_A          257 ILRLMGKGE  265 (336)
T ss_dssp             HHHHTTCCS
T ss_pred             HHHHhCCCc
Confidence            999999864

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.89  E-value=1.4e-22  Score=166.86  Aligned_cols=159  Identities=18%  Similarity=0.273  Sum_probs=128.3

Q ss_pred             ccCCCCEEEEeccccccCCCCCCCCCCCCCC-------CCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWPKVVPCTEEFPL-------EAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHP   74 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~-------~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~   74 (208)
                      ++.+ ++|||+||.++||.....+++|++..       .|.+.|+.+|.++|++++.+.+.  +++++++||+++||+..
T Consensus       130 ~~~~-~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~--g~~~~ilRp~~v~G~~~  206 (372)
T 3slg_A          130 VKYG-KHLVFPSTSEVYGMCADEQFDPDASALTYGPINKPRWIYACSKQLMDRVIWGYGME--GLNFTLFRPFNWIGPGL  206 (372)
T ss_dssp             HHHT-CEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHTT--TCEEEEEEECSEECSSC
T ss_pred             HHhC-CcEEEeCcHHHhCCCCCCCCCccccccccCCCCCCCCcHHHHHHHHHHHHHHHHHC--CCCEEEEccccccCCCc
Confidence            4557 89999999999997777778888754       56779999999999999999876  79999999999999864


Q ss_pred             CCCCCCCCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecC
Q 028478           75 SGKIGEDPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGT  153 (208)
Q Consensus        75 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~  153 (208)
                      .+.++.  ......++. ++..+..+.  ++.+++      ++++.++|+|++|+|++++.+++++.. ...+++||+++
T Consensus       207 ~~~~~~--~~~~~~~~~~~~~~~~~~~--~~~~~~------~g~~~~~~i~v~Dva~a~~~~~~~~~~-~~~~~~~ni~~  275 (372)
T 3slg_A          207 DSIYTP--KEGSSRVVTQFLGHIVRGE--NISLVD------GGSQKRAFTYVDDGISALMKIIENSNG-VATGKIYNIGN  275 (372)
T ss_dssp             CCTTCS--BSCSCHHHHHHHHHHHHTC--CEEEGG------GGCCEEECEEHHHHHHHHHHHHHCGGG-TTTTEEEEECC
T ss_pred             cccccc--ccccchHHHHHHHHHHcCC--CcEEeC------CCceEEEEEEHHHHHHHHHHHHhcccC-cCCCceEEeCC
Confidence            432211  112244555 777777877  788888      789999999999999999999998421 13569999999


Q ss_pred             -CCCcCHHHHHHHHHHHhCCCc
Q 028478          154 -GKGTSVLEMVAAFEKASGKVH  174 (208)
Q Consensus       154 -~~~~s~~e~~~~i~~~~g~~~  174 (208)
                       ++.+|+.|+++.+.+.+|.+.
T Consensus       276 ~~~~~s~~e~~~~i~~~~g~~~  297 (372)
T 3slg_A          276 PNNNFSVRELANKMLELAAEFP  297 (372)
T ss_dssp             TTCEEEHHHHHHHHHHHHHHCT
T ss_pred             CCCCccHHHHHHHHHHHhCCCc
Confidence             479999999999999998754

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.89  E-value=8.4e-23  Score=162.42  Aligned_cols=141  Identities=20%  Similarity=0.197  Sum_probs=119.0

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGEDPR   83 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~~~~   83 (208)
                      .++++|||+||..+||.....+++|+++..|.+.|+.+|.++|++++.+   . +++++++||+++||+...      . 
T Consensus        93 ~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~---~-~~~~~ilRp~~v~G~~~~------~-  161 (286)
T 3ius_A           93 AQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARGRWRVMAEQQWQAV---P-NLPLHVFRLAGIYGPGRG------P-  161 (286)
T ss_dssp             GGCSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHHHHHHHHHHHHHHS---T-TCCEEEEEECEEEBTTBS------S-
T ss_pred             CCceEEEEeecceecCCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHhh---c-CCCEEEEeccceECCCch------H-
Confidence            6889999999999999877778999999999999999999999999988   4 899999999999998421      0 


Q ss_pred             CCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHHHHH
Q 028478           84 GIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMV  163 (208)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~  163 (208)
                               +.++..+.  ++.+.+       +.+.++|+|++|+|++++.+++++    ..+++||+++++.+|+.|++
T Consensus       162 ---------~~~~~~~~--~~~~~~-------~~~~~~~i~v~Dva~a~~~~~~~~----~~g~~~~i~~~~~~s~~e~~  219 (286)
T 3ius_A          162 ---------FSKLGKGG--IRRIIK-------PGQVFSRIHVEDIAQVLAASMARP----DPGAVYNVCDDEPVPPQDVI  219 (286)
T ss_dssp             ---------STTSSSSC--CCEEEC-------TTCCBCEEEHHHHHHHHHHHHHSC----CTTCEEEECCSCCBCHHHHH
T ss_pred             ---------HHHHhcCC--ccccCC-------CCcccceEEHHHHHHHHHHHHhCC----CCCCEEEEeCCCCccHHHHH
Confidence                     11233454  455554       467899999999999999999984    35589999999999999999


Q ss_pred             HHHHHHhCCCceEE
Q 028478          164 AAFEKASGKVHIFA  177 (208)
Q Consensus       164 ~~i~~~~g~~~~~~  177 (208)
                      +.+.+.+|.+.+..
T Consensus       220 ~~i~~~~g~~~~~~  233 (286)
T 3ius_A          220 AYAAELQGLPLPPA  233 (286)
T ss_dssp             HHHHHHHTCCCCCE
T ss_pred             HHHHHHcCCCCCcc
Confidence            99999999876543

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.88  E-value=2.6e-22  Score=164.81  Aligned_cols=151  Identities=24%  Similarity=0.341  Sum_probs=125.1

Q ss_pred             ccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      ++.+++ |||+||+++||.... +++|+++..|.+.|+.+|.++|.+++.+..+   ++++++||+++|||+.      .
T Consensus       127 ~~~~~~-~V~~SS~~vyg~~~~-~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~lR~~~v~Gp~~------~  195 (362)
T 3sxp_A          127 RSKKAK-VIYASSAGVYGNTKA-PNVVGKNESPENVYGFSKLCMDEFVLSHSND---NVQVGLRYFNVYGPRE------F  195 (362)
T ss_dssp             HHTTCE-EEEEEEGGGGCSCCS-SBCTTSCCCCSSHHHHHHHHHHHHHHHTTTT---SCEEEEEECSEESTTC------G
T ss_pred             HHcCCc-EEEeCcHHHhCCCCC-CCCCCCCCCCCChhHHHHHHHHHHHHHHhcc---CCEEEEEeCceeCcCC------C
Confidence            456785 999999999997655 8999999999999999999999999998653   7899999999999842      1


Q ss_pred             CCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHH
Q 028478           82 PRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVL  160 (208)
Q Consensus        82 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~  160 (208)
                      .......++. ++..+..+.  ++.+++      ++++.++|+|++|+|++++.+++.+    ..+ +||+++++.+|+.
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~--~~~~~~------~g~~~~~~i~v~Dva~ai~~~~~~~----~~g-~~~i~~~~~~s~~  262 (362)
T 3sxp_A          196 YKEKTASMVLQLALGAMAFK--EVKLFE------FGEQLRDFVYIEDVIQANVKAMKAQ----KSG-VYNVGYSQARSYN  262 (362)
T ss_dssp             GGGGGSCHHHHHHHHHHTTS--EEECSG------GGCCEEECEEHHHHHHHHHHHTTCS----SCE-EEEESCSCEEEHH
T ss_pred             CCCcchhHHHHHHHHHHhCC--CeEEEC------CCCeEEccEEHHHHHHHHHHHHhcC----CCC-EEEeCCCCCccHH
Confidence            1111224555 677777766  777777      7889999999999999999999883    344 9999999999999


Q ss_pred             HHHHHHHHHhCCCceEE
Q 028478          161 EMVAAFEKASGKVHIFA  177 (208)
Q Consensus       161 e~~~~i~~~~g~~~~~~  177 (208)
                      |+++.+.+.+| +.++.
T Consensus       263 e~~~~i~~~~g-~~~~~  278 (362)
T 3sxp_A          263 EIVSILKEHLG-DFKVT  278 (362)
T ss_dssp             HHHHHHHHHHC-CCEEE
T ss_pred             HHHHHHHHHcC-CCceE
Confidence            99999999999 66554

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.88  E-value=8.9e-22  Score=160.47  Aligned_cols=153  Identities=25%  Similarity=0.430  Sum_probs=125.9

Q ss_pred             ccCCCCEEEEeccccccCCCCCCCCCCC-----CCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWPKVVPCTEE-----FPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSG   76 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~~~~~~E~-----~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~   76 (208)
                      ++.++ ++||+||..+||.....+++|+     .+..|.+.|+.+|.++|.+++.+++.+ +++++++||+++||+... 
T Consensus       130 ~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~ilrp~~v~G~~~~-  206 (343)
T 2b69_A          130 KRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQE-GVEVRVARIFNTFGPRMH-  206 (343)
T ss_dssp             HHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHH-CCCEEEEEECCEECTTCC-
T ss_pred             HHhCC-cEEEECcHHHhCCCCCCCCcccccccCCCCCCCCchHHHHHHHHHHHHHHHHHh-CCcEEEEEEcceeCcCCC-
Confidence            34566 9999999999987666677887     466677889999999999999998877 999999999999998421 


Q ss_pred             CCCCCCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           77 KIGEDPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        77 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                           ..  ...++. ++.++..++  ++.+++      ++++.++|+|++|+|++++.+++.+     .+++||+++++
T Consensus       207 -----~~--~~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~~v~v~Dva~a~~~~~~~~-----~~~~~~i~~~~  266 (343)
T 2b69_A          207 -----MN--DGRVVSNFILQALQGE--PLTVYG------SGSQTRAFQYVSDLVNGLVALMNSN-----VSSPVNLGNPE  266 (343)
T ss_dssp             -----TT--CCCHHHHHHHHHHHTC--CEEEES------SSCCEEECEEHHHHHHHHHHHHTSS-----CCSCEEESCCC
T ss_pred             -----CC--cccHHHHHHHHHHcCC--CceEcC------CCCeEEeeEeHHHHHHHHHHHHhcC-----CCCeEEecCCC
Confidence                 11  123444 667777776  677788      8899999999999999999999872     25899999999


Q ss_pred             CcCHHHHHHHHHHHhCCCceEE
Q 028478          156 GTSVLEMVAAFEKASGKVHIFA  177 (208)
Q Consensus       156 ~~s~~e~~~~i~~~~g~~~~~~  177 (208)
                      .+|+.|+++.+.+.+|.+.++.
T Consensus       267 ~~s~~e~~~~i~~~~g~~~~~~  288 (343)
T 2b69_A          267 EHTILEFAQLIKNLVGSGSEIQ  288 (343)
T ss_dssp             EEEHHHHHHHHHHHHTCCCCEE
T ss_pred             CCcHHHHHHHHHHHhCCCCCce
Confidence            9999999999999999886654

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.88  E-value=1.3e-21  Score=159.48  Aligned_cols=149  Identities=24%  Similarity=0.285  Sum_probs=125.5

Q ss_pred             ccCCCCEEEEeccccccCCCCC------------CCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccc
Q 028478            2 AAHGCKNLVFSSSATVYGWPKV------------VPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNP   69 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~~------------~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i   69 (208)
                      ++.++ +|||+||..+||....            .+++|+++..|.+.|+.+|.++|.+++.++.++ +++++++||+.+
T Consensus       114 ~~~~~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-gi~~~ilrp~~v  191 (348)
T 1oc2_A          114 RKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF-GVKATISNCSNN  191 (348)
T ss_dssp             HHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECCE
T ss_pred             HHhCC-eEEEecccceeCCCcccccccccccccCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh-CCCEEEEeecee
Confidence            34577 9999999999985432            578999999999999999999999999998887 999999999999


Q ss_pred             cCCCCCCCCCCCCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCce
Q 028478           70 VGAHPSGKIGEDPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEV  148 (208)
Q Consensus        70 ~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~  148 (208)
                      ||+...          ...+++ ++..+..+.  ++.+++      ++.+.++|+|++|+|++++.+++.+    ..+++
T Consensus       192 ~G~~~~----------~~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~~i~v~Dva~~~~~~~~~~----~~g~~  249 (348)
T 1oc2_A          192 YGPYQH----------IEKFIPRQITNILAGI--KPKLYG------EGKNVRDWIHTNDHSTGVWAILTKG----RMGET  249 (348)
T ss_dssp             ESTTCC----------TTSHHHHHHHHHHHTC--CCEEET------TSCCEEECEEHHHHHHHHHHHHHHC----CTTCE
T ss_pred             eCCCCC----------ccchHHHHHHHHHcCC--CceEec------CCCceEeeEEHHHHHHHHHHHhhCC----CCCCe
Confidence            998421          123444 666677776  667778      7889999999999999999999872    45689


Q ss_pred             EEecCCCCcCHHHHHHHHHHHhCCCc
Q 028478          149 YNLGTGKGTSVLEMVAAFEKASGKVH  174 (208)
Q Consensus       149 ~ni~~~~~~s~~e~~~~i~~~~g~~~  174 (208)
                      ||++++..+|+.|+++.+.+.+|.+.
T Consensus       250 ~~i~~~~~~s~~e~~~~i~~~~g~~~  275 (348)
T 1oc2_A          250 YLIGADGEKNNKEVLELILEKMGQPK  275 (348)
T ss_dssp             EEECCSCEEEHHHHHHHHHHHTTCCT
T ss_pred             EEeCCCCCCCHHHHHHHHHHHhCCCc
Confidence            99999999999999999999999864

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.88  E-value=2.1e-21  Score=154.41  Aligned_cols=143  Identities=17%  Similarity=0.157  Sum_probs=120.6

Q ss_pred             ccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      ++.++ +|||+||..+|+.....+++|+++..|.+.|+.+|.++|++++.+     ..+++++||+.+||+..       
T Consensus        95 ~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~-----~~~~~ilR~~~v~G~~~-------  161 (287)
T 3sc6_A           95 QLVGA-KLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGEQFVKEL-----HNKYFIVRTSWLYGKYG-------  161 (287)
T ss_dssp             HHHTC-EEEEEEEGGGSCCCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHH-----CSSEEEEEECSEECSSS-------
T ss_pred             HHcCC-eEEEEchhhhcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHh-----CCCcEEEeeeeecCCCC-------
Confidence            45677 799999999999777788999999999999999999999999987     34679999999999731       


Q ss_pred             CCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHH
Q 028478           82 PRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVL  160 (208)
Q Consensus        82 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~  160 (208)
                           ..++. ++..+..+.  ++.+.+        ++.++|+|++|+|++++.+++++    . +++||+++++.+|+.
T Consensus       162 -----~~~~~~~~~~~~~~~--~~~~~~--------~~~~~~i~v~Dva~~~~~~~~~~----~-~~~~~i~~~~~~s~~  221 (287)
T 3sc6_A          162 -----NNFVKTMIRLGKERE--EISVVA--------DQIGSPTYVADLNVMINKLIHTS----L-YGTYHVSNTGSCSWF  221 (287)
T ss_dssp             -----CCHHHHHHHHHTTCS--EEEEEC--------SCEECCEEHHHHHHHHHHHHTSC----C-CEEEECCCBSCEEHH
T ss_pred             -----CcHHHHHHHHHHcCC--CeEeec--------CcccCceEHHHHHHHHHHHHhCC----C-CCeEEEcCCCcccHH
Confidence                 23455 555555555  777765        47899999999999999999983    2 589999999999999


Q ss_pred             HHHHHHHHHhCCCceEE
Q 028478          161 EMVAAFEKASGKVHIFA  177 (208)
Q Consensus       161 e~~~~i~~~~g~~~~~~  177 (208)
                      |+++.+.+.+|.+.++.
T Consensus       222 e~~~~i~~~~g~~~~~~  238 (287)
T 3sc6_A          222 EFAKKIFSYANMKVNVL  238 (287)
T ss_dssp             HHHHHHHHHHTCCCEEE
T ss_pred             HHHHHHHHHcCCCccee
Confidence            99999999999987665

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.87  E-value=6.1e-22  Score=163.62  Aligned_cols=161  Identities=25%  Similarity=0.363  Sum_probs=118.1

Q ss_pred             ccC-CCCEEEEeccccccCCCCCCCCC--CCC---CC-CCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCC
Q 028478            2 AAH-GCKNLVFSSSATVYGWPKVVPCT--EEF---PL-EAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHP   74 (208)
Q Consensus         2 ~~~-~vk~~i~~SS~~vyg~~~~~~~~--E~~---~~-~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~   74 (208)
                      ++. ++++|||+||..+||.....+++  |++   +. .|.+.|+.+|.++|.+++.+++++ +++++++||+++||+..
T Consensus       138 ~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-gi~~~ilRp~~v~G~~~  216 (377)
T 2q1s_A          138 KHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH-QLPTVRARFQNVYGPGE  216 (377)
T ss_dssp             TTCSSCCEEEEEEEC--------------CCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH-CCCEEEEEECCEECTTC
T ss_pred             HHhCCCCeEEEeCCHHHcCCCCCCCcCcccccccccccCCCCchHHHHHHHHHHHHHHHHHh-CCCEEEEeeccEECCCC
Confidence            456 89999999999999976555778  887   76 788999999999999999998877 89999999999999853


Q ss_pred             CCCCCC---CCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHH-HHHHhhhcCCCCCCCceE
Q 028478           75 SGKIGE---DPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADG-HIAALHKLDDPKIGCEVY  149 (208)
Q Consensus        75 ~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~-~~~~~~~~~~~~~~~~~~  149 (208)
                      .+..|.   ........++. ++..+..+.  ++.+++      ++++.++|+|++|+|++ ++.+++++    ..+ +|
T Consensus       217 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~g------~g~~~~~~i~v~Dva~a~i~~~~~~~----~~g-~~  283 (377)
T 2q1s_A          217 ILGAGRWRGTPATVWRNVTPTFIYKALKGM--PLPLEN------GGVATRDFIFVEDVANGLIACAADGT----PGG-VY  283 (377)
T ss_dssp             CTTCSSCCSSGGGTSCSHHHHHHHHHHTTC--CCCCSG------GGCCEECCEEHHHHHHHHHHHHHHCC----TTE-EE
T ss_pred             cccccccccCcccccccHHHHHHHHHHcCC--CeEEeC------CCCeEEeeEEHHHHHHHHHHHHHhcC----CCC-eE
Confidence            111110   10000034455 666676766  566667      78899999999999999 99999883    244 99


Q ss_pred             EecCCCCcCHHHHHHHHHHHhCCCceE
Q 028478          150 NLGTGKGTSVLEMVAAFEKASGKVHIF  176 (208)
Q Consensus       150 ni~~~~~~s~~e~~~~i~~~~g~~~~~  176 (208)
                      |+++++.+|+.|+++.+.+.+|.+.++
T Consensus       284 ~i~~~~~~s~~e~~~~i~~~~g~~~~~  310 (377)
T 2q1s_A          284 NIASGKETSIADLATKINEITGNNTEL  310 (377)
T ss_dssp             ECCCCCCEEHHHHHHHHHHHHTCCSCC
T ss_pred             EecCCCceeHHHHHHHHHHHhCCCCCc
Confidence            999999999999999999999987654

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.87  E-value=1.8e-21  Score=160.90  Aligned_cols=157  Identities=22%  Similarity=0.287  Sum_probs=126.4

Q ss_pred             ccCCCCEEEEeccccccCCCCC-----CCCCCCC--CCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWPKV-----VPCTEEF--PLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHP   74 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~~-----~~~~E~~--~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~   74 (208)
                      ++.++++|||+||..+|+....     .+++|++  +..|.+.|+.+|.++|.+++.+++++ +++++++||+++||+..
T Consensus       133 ~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-gi~~~ilrp~~v~G~~~  211 (379)
T 2c5a_A          133 RINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDF-GIECRIGRFHNIYGPFG  211 (379)
T ss_dssp             HHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECCEECTTS
T ss_pred             HHcCCCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCCCChhHHHHHHHHHHHHHHHHHH-CCCEEEEEeCceeCcCC
Confidence            4578999999999999985321     3477877  66788999999999999999998887 99999999999999852


Q ss_pred             CCCCCCCCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecC
Q 028478           75 SGKIGEDPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGT  153 (208)
Q Consensus        75 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~  153 (208)
                      .      .......++. ++.++..+. +.+.+++      ++++.++|+|++|+|++++.+++.+     .+++||+++
T Consensus       212 ~------~~~~~~~~~~~~~~~~~~~~-~~~~~~g------~g~~~~~~i~v~Dva~ai~~~l~~~-----~~~~~ni~~  273 (379)
T 2c5a_A          212 T------WKGGREKAPAAFCRKAQTST-DRFEMWG------DGLQTRSFTFIDECVEGVLRLTKSD-----FREPVNIGS  273 (379)
T ss_dssp             C------CSSSCCCHHHHHHHHHHHCS-SCEEEES------CSCCEECCEEHHHHHHHHHHHHHSS-----CCSCEEECC
T ss_pred             C------cccccccHHHHHHHHHHhCC-CceEEeC------CCCeeEEEEEHHHHHHHHHHHhhcc-----CCCeEEeCC
Confidence            2      1111122444 666666665 2377888      8899999999999999999999872     358999999


Q ss_pred             CCCcCHHHHHHHHHHHhCCCceEE
Q 028478          154 GKGTSVLEMVAAFEKASGKVHIFA  177 (208)
Q Consensus       154 ~~~~s~~e~~~~i~~~~g~~~~~~  177 (208)
                      ++.+|+.|+++.+.+.+|.+.++.
T Consensus       274 ~~~~s~~e~~~~i~~~~g~~~~~~  297 (379)
T 2c5a_A          274 DEMVSMNEMAEMVLSFEEKKLPIH  297 (379)
T ss_dssp             CCCEEHHHHHHHHHHTTTCCCCEE
T ss_pred             CCccCHHHHHHHHHHHhCCCCcee
Confidence            999999999999999999876654

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.87  E-value=2.6e-21  Score=159.55  Aligned_cols=154  Identities=21%  Similarity=0.249  Sum_probs=124.7

Q ss_pred             cCCC---CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCC
Q 028478            3 AHGC---KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIG   79 (208)
Q Consensus         3 ~~~v---k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~   79 (208)
                      +.++   ++||++||..+|+.....+++|+++..|.+.|+.+|.++|.+++.++.++ +++++++|++++||+..     
T Consensus       142 ~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~i~r~~~~~gp~~-----  215 (375)
T 1t2a_A          142 TCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAY-NLFAVNGILFNHESPRR-----  215 (375)
T ss_dssp             HTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECCEECTTS-----
T ss_pred             HhCCCccceEEEecchhhhCCCCCCCCCccCCCCCCChhHHHHHHHHHHHHHHHHHh-CCCEEEEecccccCCCC-----
Confidence            4566   79999999999997666789999999999999999999999999998887 89999999999999842     


Q ss_pred             CCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCH
Q 028478           80 EDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSV  159 (208)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~  159 (208)
                       ........+..++.++..+.. +...++      ++++.++|+|++|+|++++.+++++    . +++||+++++.+|+
T Consensus       216 -~~~~~~~~~~~~~~~~~~g~~-~~~~~g------~~~~~~~~i~v~Dva~a~~~~~~~~----~-~~~~ni~~~~~~s~  282 (375)
T 1t2a_A          216 -GANFVTRKISRSVAKIYLGQL-ECFSLG------NLDAKRDWGHAKDYVEAMWLMLQND----E-PEDFVIATGEVHSV  282 (375)
T ss_dssp             -CTTSHHHHHHHHHHHHHHTSC-SCEEES------CTTCEECCEEHHHHHHHHHHHHHSS----S-CCCEEECCSCCEEH
T ss_pred             -CCCcchHHHHHHHHHHHcCCC-ceeEeC------CCCceeeeEEHHHHHHHHHHHHhcC----C-CceEEEeCCCcccH
Confidence             111100112235556666653 334567      7899999999999999999999873    2 38999999999999


Q ss_pred             HHHHHHHHHHhCCCce
Q 028478          160 LEMVAAFEKASGKVHI  175 (208)
Q Consensus       160 ~e~~~~i~~~~g~~~~  175 (208)
                      .|+++.+.+.+|.+.+
T Consensus       283 ~e~~~~i~~~~g~~~~  298 (375)
T 1t2a_A          283 REFVEKSFLHIGKTIV  298 (375)
T ss_dssp             HHHHHHHHHHTTCCEE
T ss_pred             HHHHHHHHHHhCCCcc
Confidence            9999999999998754

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.87  E-value=1e-21  Score=157.77  Aligned_cols=156  Identities=16%  Similarity=0.145  Sum_probs=123.2

Q ss_pred             ccCCCCEEEEeccccccCCCC-CCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWPK-VVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~-~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      ++.++++|||+||.++|+... ..+.+|+.+..|.+.|+.+|.++|.+++.+++++ +++++++||+++||+....    
T Consensus       106 ~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~lrp~~v~g~~~~~----  180 (312)
T 2yy7_A          106 KAKKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGISKQAGERWCEYYHNIY-GVDVRSIRYPGLISWSTPP----  180 (312)
T ss_dssp             HTTSCSEEECCEEGGGCCTTSCSSSBCSSCBCCCCSHHHHHHHHHHHHHHHHHHHH-CCEEECEEECEEECSSSCC----
T ss_pred             HHcCCCEEEEeccHHHhCCCCCCCCccccCcCCCCchhHHHHHHHHHHHHHHHHhc-CCcEEEEeCCeEecCCCCC----
Confidence            457899999999999998643 3568888888899999999999999999998887 8999999999999974210    


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHH
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVL  160 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~  160 (208)
                       .....+.+...+.+...++  ++.+++      ++++.++|+|++|+|++++.+++++......+++||+++ +.+|+.
T Consensus       181 -~~~~~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~ni~~-~~~s~~  250 (312)
T 2yy7_A          181 -GGGTTDYAVDIFYKAIADK--KYECFL------SSETKMPMMYMDDAIDATINIMKAPVEKIKIHSSYNLAA-MSFTPT  250 (312)
T ss_dssp             -CSCTTTHHHHHHHHHHHTS--EEEESS------CTTCCEEEEEHHHHHHHHHHHHHSCGGGCCCSSCEECCS-EEECHH
T ss_pred             -CCchhhhHHHHHHHHHcCC--CeEEec------CCCceeeeeeHHHHHHHHHHHHhCcccccccCceEEeCC-CccCHH
Confidence             1111233555555555555  566777      788899999999999999999987321101248999986 789999


Q ss_pred             HHHHHHHHHhCC
Q 028478          161 EMVAAFEKASGK  172 (208)
Q Consensus       161 e~~~~i~~~~g~  172 (208)
                      |+++.+.+.+|.
T Consensus       251 e~~~~i~~~~~~  262 (312)
T 2yy7_A          251 EIANEIKKHIPE  262 (312)
T ss_dssp             HHHHHHHTTCTT
T ss_pred             HHHHHHHHHCCC
Confidence            999999999983

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.87  E-value=8.3e-21  Score=157.70  Aligned_cols=162  Identities=23%  Similarity=0.198  Sum_probs=124.7

Q ss_pred             ccCCC-CEEEEeccccccCCCCCCCCCCC--------------CCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEec
Q 028478            2 AAHGC-KNLVFSSSATVYGWPKVVPCTEE--------------FPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRY   66 (208)
Q Consensus         2 ~~~~v-k~~i~~SS~~vyg~~~~~~~~E~--------------~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~   66 (208)
                      ++.++ ++||++||.++||... .+++|+              .+..|.+.|+.+|.++|.+++.++..+ +++++++||
T Consensus       142 ~~~~~~~~~V~~SS~~vyg~~~-~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-gi~~~ivrp  219 (404)
T 1i24_A          142 KEFGEECHLVKLGTMGEYGTPN-IDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW-GIRATDLNQ  219 (404)
T ss_dssp             HHHCTTCEEEEECCGGGGCCCS-SCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH-CCEEEEEEE
T ss_pred             HHhCCCcEEEEeCcHHHhCCCC-CCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc-CCeEEEEec
Confidence            34566 5999999999998644 456775              466788999999999999999998887 999999999


Q ss_pred             ccccCCCCCCCC-------CCCCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhh
Q 028478           67 FNPVGAHPSGKI-------GEDPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHK  138 (208)
Q Consensus        67 ~~i~G~~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  138 (208)
                      ++|||++.....       .....+....++. ++..+..+.  ++.+++      ++++.++|+|++|+|++++.++++
T Consensus       220 ~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~g------~g~~~~~~i~v~Dva~a~~~~l~~  291 (404)
T 1i24_A          220 GVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCVQAAVGH--PLTVYG------KGGQTRGYLDIRDTVQCVEIAIAN  291 (404)
T ss_dssp             CEEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHHHHHHTC--CEEEET------TSCCEEEEEEHHHHHHHHHHHHHS
T ss_pred             ceeeCCCCCccccccccccccccccchhhHHHHHHHHHHcCC--eeEEeC------CCCceECcEEHHHHHHHHHHHHhC
Confidence            999998532100       0000111123444 777777776  677888      889999999999999999999987


Q ss_pred             cCCCCCCC--ceEEecCCCCcCHHHHHHHHHHH---hCCCceEE
Q 028478          139 LDDPKIGC--EVYNLGTGKGTSVLEMVAAFEKA---SGKVHIFA  177 (208)
Q Consensus       139 ~~~~~~~~--~~~ni~~~~~~s~~e~~~~i~~~---~g~~~~~~  177 (208)
                      +.   ..+  ++||+++ .++|+.|+++.+.+.   +|.+.++.
T Consensus       292 ~~---~~g~~~~yni~~-~~~s~~e~~~~i~~~~~~~g~~~~~~  331 (404)
T 1i24_A          292 PA---KAGEFRVFNQFT-EQFSVNELASLVTKAGSKLGLDVKKM  331 (404)
T ss_dssp             CC---CTTCEEEEEECS-EEEEHHHHHHHHHHHHHTTTCCCCEE
T ss_pred             cc---cCCCceEEEECC-CCCcHHHHHHHHHHHHHhhCCCcccc
Confidence            32   223  6999998 789999999999998   78876544

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.86  E-value=4.6e-21  Score=157.05  Aligned_cols=144  Identities=22%  Similarity=0.310  Sum_probs=121.8

Q ss_pred             EEEEeccccccCCCCC--C--------CCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCC
Q 028478            8 NLVFSSSATVYGWPKV--V--------PCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGK   77 (208)
Q Consensus         8 ~~i~~SS~~vyg~~~~--~--------~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~   77 (208)
                      +||++||.++||....  .        +++|+++..|.+.|+.+|.++|.+++.++.++ +++++++||+.+||+...  
T Consensus       127 ~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-gi~~~~vrp~~v~G~~~~--  203 (361)
T 1kew_A          127 RFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY-GLPTIVTNCSNNYGPYHF--  203 (361)
T ss_dssp             EEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-CCCEEEEEECEEESTTCC--
T ss_pred             eEEEeCCHHHhCCCcccccccccccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh-CCcEEEEeeceeECCCCC--
Confidence            9999999999985431  1        68999998999999999999999999998887 999999999999998421  


Q ss_pred             CCCCCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           78 IGEDPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        78 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                              ...++. ++..+..+.  ++.+++      ++.+.++|+|++|+|++++.+++..    ..+++||++++..
T Consensus       204 --------~~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~~i~v~Dva~a~~~~~~~~----~~g~~~~v~~~~~  263 (361)
T 1kew_A          204 --------PEKLIPLVILNALEGK--PLPIYG------KGDQIRDWLYVEDHARALHMVVTEG----KAGETYNIGGHNE  263 (361)
T ss_dssp             --------TTSHHHHHHHHHHHTC--CEEEET------TSCCEEEEEEHHHHHHHHHHHHHHC----CTTCEEEECCCCE
T ss_pred             --------cccHHHHHHHHHHcCC--CceEcC------CCceeEeeEEHHHHHHHHHHHHhCC----CCCCEEEecCCCe
Confidence                    123444 666677776  677888      8889999999999999999999872    4568999999999


Q ss_pred             cCHHHHHHHHHHHhCCCc
Q 028478          157 TSVLEMVAAFEKASGKVH  174 (208)
Q Consensus       157 ~s~~e~~~~i~~~~g~~~  174 (208)
                      +|+.|+++.+.+.+|.+.
T Consensus       264 ~s~~e~~~~i~~~~g~~~  281 (361)
T 1kew_A          264 KKNLDVVFTICDLLDEIV  281 (361)
T ss_dssp             EEHHHHHHHHHHHHHHHS
T ss_pred             eeHHHHHHHHHHHhCCcC
Confidence            999999999999988653

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.86  E-value=3.4e-21  Score=170.84  Aligned_cols=174  Identities=56%  Similarity=0.945  Sum_probs=132.8

Q ss_pred             ccCCCCEEEEeccccccCCCC----CCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhc--CCCccEEEEecccccCCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWPK----VVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRS--DSEWKIILLRYFNPVGAHPS   75 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~----~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~--~~~~~~~iiR~~~i~G~~~~   75 (208)
                      ++.++++||++||.++||...    ..+++|+++..|.+.|+.+|.++|.+++.++.+  . +++++++||+++||++.+
T Consensus       123 ~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~-g~~~~ilR~~~vyG~~~~  201 (699)
T 1z45_A          123 QQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKK-SWKFAILRYFNPIGAHPS  201 (699)
T ss_dssp             HHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHSTT-SCEEEEEEECEEECCCTT
T ss_pred             HHcCCCEEEEECcHHHhCCCccccccCCccccCCCCCCChHHHHHHHHHHHHHHHHHhccC-CCcEEEEEeccccCCCcc
Confidence            456889999999999998532    256889988889999999999999999998765  5 899999999999999776


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCC---CCCCCceEEec
Q 028478           76 GKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDD---PKIGCEVYNLG  152 (208)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~~ni~  152 (208)
                      +.+|.........+++++.+...+...++.++|.++...++++.++|+|++|+|++++.+++.+..   ....+++||++
T Consensus       202 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~  281 (699)
T 1z45_A          202 GLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLG  281 (699)
T ss_dssp             SSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEES
T ss_pred             cccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCCCCCeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEEC
Confidence            666654443345677766666655333555554111112478899999999999999999975310   11234799999


Q ss_pred             CCCCcCHHHHHHHHHHHhCCCceE
Q 028478          153 TGKGTSVLEMVAAFEKASGKVHIF  176 (208)
Q Consensus       153 ~~~~~s~~e~~~~i~~~~g~~~~~  176 (208)
                      +++.+|+.|+++.+.+.+|.+.++
T Consensus       282 ~~~~~s~~el~~~i~~~~g~~~~~  305 (699)
T 1z45_A          282 SGKGSTVFEVYHAFCKASGIDLPY  305 (699)
T ss_dssp             CSCCEEHHHHHHHHHHHHTCCCCC
T ss_pred             CCCCCcHHHHHHHHHHHhCCCCCc
Confidence            999999999999999999987554

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.86  E-value=4.4e-21  Score=157.76  Aligned_cols=154  Identities=19%  Similarity=0.203  Sum_probs=124.1

Q ss_pred             cCCC---CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCC
Q 028478            3 AHGC---KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIG   79 (208)
Q Consensus         3 ~~~v---k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~   79 (208)
                      +.++   ++||++||.++||.....+++|+++..|.+.|+.+|.++|.+++.++.++ +++++++|++++||+...    
T Consensus       118 ~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~~r~~~~~gp~~~----  192 (372)
T 1db3_A          118 FLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESY-GMYACNGILFNHESPRRG----  192 (372)
T ss_dssp             HTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-CCCEEEEEECCEECTTSC----
T ss_pred             HhCCCCCcEEEEeCChhhhCCCCCCCCCccCCCCCCChHHHHHHHHHHHHHHHHHHh-CCCeEEEEECCccCCCCC----
Confidence            4566   79999999999997666689999999999999999999999999998887 899999999999998421    


Q ss_pred             CCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCH
Q 028478           80 EDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSV  159 (208)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~  159 (208)
                        .......+..++..+..+.. +...+|      ++++.++|+|++|+|++++.+++++     .+++||+++++.+|+
T Consensus       193 --~~~~~~~~~~~~~~~~~g~~-~~~~~g------~~~~~~~~i~v~Dva~a~~~~~~~~-----~~~~~ni~~~~~~s~  258 (372)
T 1db3_A          193 --ETFVTRKITRAIANIAQGLE-SCLYLG------NMDSLRDWGHAKDYVKMQWMMLQQE-----QPEDFVIATGVQYSV  258 (372)
T ss_dssp             --TTSHHHHHHHHHHHHHTTSC-CCEEES------CTTCEECCEEHHHHHHHHHHTTSSS-----SCCCEEECCCCCEEH
T ss_pred             --CcchhhHHHHHHHHHHcCCC-Cceeec------CCCceeeeeEHHHHHHHHHHHHhcC-----CCceEEEcCCCceeH
Confidence              11000112225555566652 344567      7899999999999999999999873     238999999999999


Q ss_pred             HHHHHHHHHHhCCCce
Q 028478          160 LEMVAAFEKASGKVHI  175 (208)
Q Consensus       160 ~e~~~~i~~~~g~~~~  175 (208)
                      .|+++.+.+.+|.+.+
T Consensus       259 ~e~~~~i~~~~g~~~~  274 (372)
T 1db3_A          259 RQFVEMAAAQLGIKLR  274 (372)
T ss_dssp             HHHHHHHHHTTTEEEE
T ss_pred             HHHHHHHHHHhCCCcc
Confidence            9999999999998654

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.86  E-value=4.3e-21  Score=156.12  Aligned_cols=159  Identities=16%  Similarity=0.226  Sum_probs=123.4

Q ss_pred             ccCCCCEEEEeccccccCCCCCCCCCCCCCC-------CCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWPKVVPCTEEFPL-------EAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHP   74 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~-------~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~   74 (208)
                      ++.+ ++|||+||.++||.....+++|+++.       .|.+.|+.+|.++|.+++.+++++ +++++++||+++||+..
T Consensus       106 ~~~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~ilrp~~v~G~~~  183 (345)
T 2bll_A          106 VKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE-GLQFTLFRPFNWMGPRL  183 (345)
T ss_dssp             HHTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHH-CCCEEEEEECSEECSSC
T ss_pred             HHhC-CeEEEEecHHHcCCCCCCCcCCcccccccCcccCcccccHHHHHHHHHHHHHHHHhc-CCCEEEEcCCcccCCCc
Confidence            3456 79999999999997666678888754       244589999999999999998877 99999999999999853


Q ss_pred             CCCCCCCCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecC
Q 028478           75 SGKIGEDPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGT  153 (208)
Q Consensus        75 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~  153 (208)
                      .....  +......++. ++..+..+.  ++.+++      ++++.++|+|++|+|++++.+++++.. ...+++||+++
T Consensus       184 ~~~~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~------~g~~~~~~i~v~Dva~a~~~~~~~~~~-~~~g~~~~i~~  252 (345)
T 2bll_A          184 DNLNA--ARIGSSRAITQLILNLVEGS--PIKLID------GGKQKRCFTDIRDGIEALYRIIENAGN-RCDGEIINIGN  252 (345)
T ss_dssp             CCTTC--SBSCBCHHHHHHHHHHHHTC--CEEEGG------GSCCEEECEEHHHHHHHHHHHHHCGGG-TTTTEEEEECC
T ss_pred             ccccc--cccccccHHHHHHHHHHcCC--CcEEEC------CCCEEEEEEEHHHHHHHHHHHHhhccc-cCCCceEEeCC
Confidence            21100  0001123444 677777776  677777      788999999999999999999987321 13468999999


Q ss_pred             CC-CcCHHHHHHHHHHHhCCC
Q 028478          154 GK-GTSVLEMVAAFEKASGKV  173 (208)
Q Consensus       154 ~~-~~s~~e~~~~i~~~~g~~  173 (208)
                      ++ .+|+.|+++.+.+.+|.+
T Consensus       253 ~~~~~s~~e~~~~i~~~~g~~  273 (345)
T 2bll_A          253 PENEASIEELGEMLLASFEKH  273 (345)
T ss_dssp             TTSEEEHHHHHHHHHHHHHTC
T ss_pred             CCCCCCHHHHHHHHHHHhCCC
Confidence            86 899999999999998865

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.85  E-value=9e-21  Score=154.31  Aligned_cols=160  Identities=23%  Similarity=0.293  Sum_probs=123.9

Q ss_pred             ccCCCC-EEEEeccccccCCCCCC----------------CCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEE
Q 028478            2 AAHGCK-NLVFSSSATVYGWPKVV----------------PCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILL   64 (208)
Q Consensus         2 ~~~~vk-~~i~~SS~~vyg~~~~~----------------~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ii   64 (208)
                      ++.+++ +|||+||.++||.....                +++|+.+..|.+.|+.+|.++|.+++.++.++ +++++++
T Consensus       112 ~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-gi~~~il  190 (347)
T 1orr_A          112 RQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF-GLNTVVF  190 (347)
T ss_dssp             HHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH-CCEEEEE
T ss_pred             HHhCCCceEEEeccHHHhCCCCcCCcccccccccccccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh-CCcEEEE
Confidence            345675 99999999999854332                26777788888999999999999999998887 9999999


Q ss_pred             ecccccCCCCCCCCCCCCCCCCCChHH-HHHHHHhCCC---CeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcC
Q 028478           65 RYFNPVGAHPSGKIGEDPRGIPNNLMP-FVTQVAVGRR---PELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLD  140 (208)
Q Consensus        65 R~~~i~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  140 (208)
                      ||+.+||+...      ... ...++. ++.+...+..   .++.++|      ++++.++|+|++|+|++++.+++.+ 
T Consensus       191 rp~~v~g~~~~------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g------~g~~~~~~i~v~Dva~a~~~~~~~~-  256 (347)
T 1orr_A          191 RHSSMYGGRQF------ATY-DQGWVGWFCQKAVEIKNGINKPFTISG------NGKQVRDVLHAEDMISLYFTALANV-  256 (347)
T ss_dssp             EECCEECTTCC------CBT-TBCHHHHHHHHHHHHHTTCCCCEEEES------SSCCEEECEEHHHHHHHHHHHHHTH-
T ss_pred             ccCceeCcCCC------CCC-cCcHHHHHHHHHHhCcccCCCCeEEec------CCcceEeeEEHHHHHHHHHHHHhcc-
Confidence            99999998422      111 122333 5555555431   1467778      8999999999999999999999741 


Q ss_pred             CCCCCCceEEecCCC--CcCHHHHHHHHHHHhCCCceEE
Q 028478          141 DPKIGCEVYNLGTGK--GTSVLEMVAAFEKASGKVHIFA  177 (208)
Q Consensus       141 ~~~~~~~~~ni~~~~--~~s~~e~~~~i~~~~g~~~~~~  177 (208)
                       ....+++||++++.  ++|+.|+++.+.+.+|.+.++.
T Consensus       257 -~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~~~~~  294 (347)
T 1orr_A          257 -SKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFT  294 (347)
T ss_dssp             -HHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEE
T ss_pred             -ccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCCCCCce
Confidence             02345899999886  4999999999999999876654

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.85  E-value=1.9e-20  Score=152.23  Aligned_cols=154  Identities=18%  Similarity=0.181  Sum_probs=123.2

Q ss_pred             cCCC-CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCCC
Q 028478            3 AHGC-KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         3 ~~~v-k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      +.++ ++||++||.++||.....+++|+.+..|.+.|+.+|.++|.+++.++.++ +++++++|++++|||+      ..
T Consensus       115 ~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~~r~~~~~gpg------~~  187 (345)
T 2z1m_A          115 TVKPDTKFYQASTSEMFGKVQEIPQTEKTPFYPRSPYAVAKLFGHWITVNYREAY-NMFACSGILFNHESPL------RG  187 (345)
T ss_dssp             HHCTTCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-CCCEEEEEECCEECTT------SC
T ss_pred             HhCCCceEEEEechhhcCCCCCCCCCccCCCCCCChhHHHHHHHHHHHHHHHHHh-CCceEeeeeeeecCCC------CC
Confidence            3466 79999999999997766788999999999999999999999999998887 8999999999999984      21


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHHH
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLE  161 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e  161 (208)
                      .......+..++.++..+.. ....++      ++.+.++|+|++|+|++++.+++++    . +++||+++++.+|+.|
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~-~~~~~~------~~~~~~~~~~v~Dva~a~~~~~~~~----~-~~~~~i~~~~~~s~~e  255 (345)
T 2z1m_A          188 IEFVTRKITYSLARIKYGLQ-DKLVLG------NLNAKRDWGYAPEYVEAMWLMMQQP----E-PDDYVIATGETHTVRE  255 (345)
T ss_dssp             TTSHHHHHHHHHHHHHTTSC-SCEEES------CTTCEECCEEHHHHHHHHHHHHTSS----S-CCCEEECCSCCEEHHH
T ss_pred             CcchhHHHHHHHHHHHcCCC-CeeeeC------CCCceeeeEEHHHHHHHHHHHHhCC----C-CceEEEeCCCCccHHH
Confidence            11101112224445555542 233556      7888999999999999999999873    2 3799999999999999


Q ss_pred             HHHHHHHHhCCCce
Q 028478          162 MVAAFEKASGKVHI  175 (208)
Q Consensus       162 ~~~~i~~~~g~~~~  175 (208)
                      +++.+.+.+|.+.+
T Consensus       256 ~~~~i~~~~g~~~~  269 (345)
T 2z1m_A          256 FVEKAAKIAGFDIE  269 (345)
T ss_dssp             HHHHHHHHTTCCEE
T ss_pred             HHHHHHHHhCCCcc
Confidence            99999999998754

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.85  E-value=1.7e-20  Score=151.02  Aligned_cols=156  Identities=12%  Similarity=0.064  Sum_probs=121.6

Q ss_pred             ccCCCCEEEEeccccccCCC-CCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWP-KVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~-~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      ++.++++||++||..+|+.. ...+.+|+++..|.+.|+.+|.++|.+++.+.+.+ +++++++|++.+||+....    
T Consensus       100 ~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~lR~~~~~g~~~~~----  174 (317)
T 3ajr_A          100 KQHRVEKVVIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAELLGQYYYEKF-GLDVRSLRYPGIISYKAEP----  174 (317)
T ss_dssp             HHTTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECEEECSSSCC----
T ss_pred             HHcCCCEEEEecCHHHhCCCCCCCCccccccCCCCchHHHHHHHHHHHHHHHHHhc-CCeEEEEecCcEeccCCCC----
Confidence            45789999999999999854 33467888888899999999999999999998887 9999999999999974210    


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHH
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVL  160 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~  160 (208)
                       .....+.+...+.+...++  ++..++      ++++.++|+|++|+|++++.+++++......+++||+++ ..+|+.
T Consensus       175 -~~~~~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~~i~v~Dva~a~~~~l~~~~~~~~~g~~~~i~~-~~~s~~  244 (317)
T 3ajr_A          175 -TAGTTDYAVEIFYYAVKRE--KYKCYL------APNRALPMMYMPDALKALVDLYEADRDKLVLRNGYNVTA-YTFTPS  244 (317)
T ss_dssp             -CSCSSTHHHHHHHHHHTTC--CEEECS------CTTCCEEEEEHHHHHHHHHHHHHCCGGGCSSCSCEECCS-EEECHH
T ss_pred             -CCcchhHHHHHHHHHHhCC--Cceeec------CccceeeeeEHHHHHHHHHHHHhCCccccccCceEecCC-ccccHH
Confidence             1111233555555555555  456666      678899999999999999999987321111348999986 579999


Q ss_pred             HHHHHHHHHhCC
Q 028478          161 EMVAAFEKASGK  172 (208)
Q Consensus       161 e~~~~i~~~~g~  172 (208)
                      |+++.+.+.+|.
T Consensus       245 e~~~~i~~~~~~  256 (317)
T 3ajr_A          245 ELYSKIKERIPE  256 (317)
T ss_dssp             HHHHHHHTTCCS
T ss_pred             HHHHHHHHHCCc
Confidence            999999999883

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.85  E-value=1.4e-20  Score=149.76  Aligned_cols=143  Identities=17%  Similarity=0.144  Sum_probs=117.2

Q ss_pred             CccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCC
Q 028478            1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         1 a~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      |++.++++|||+||+++||.....+++|+++..|.+.|+.+|.++|++ +.+      ++++++||+++||+...     
T Consensus        96 ~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~-~~~------~~~~ilR~~~v~G~~~~-----  163 (286)
T 3gpi_A           96 LEGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRMLEAEAL-LAA------YSSTILRFSGIYGPGRL-----  163 (286)
T ss_dssp             TTTSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCCSHHHHHHHHHHHH-GGG------SSEEEEEECEEEBTTBC-----
T ss_pred             HhhCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCCChhhHHHHHHHHH-Hhc------CCeEEEecccccCCCch-----
Confidence            456789999999999999987777899999999999999999999999 643      68899999999998411     


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHH
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVL  160 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~  160 (208)
                                .++..+.. .  ..  .+      ++++.++|+|++|+|++++.+++++. ....+++||+++++.+|+.
T Consensus       164 ----------~~~~~~~~-~--~~--~~------~~~~~~~~i~v~Dva~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~  221 (286)
T 3gpi_A          164 ----------RMIRQAQT-P--EQ--WP------ARNAWTNRIHRDDGAAFIAYLIQQRS-HAVPERLYIVTDNQPLPVH  221 (286)
T ss_dssp             ----------HHHHHTTC-G--GG--SC------SSBCEECEEEHHHHHHHHHHHHHHHT-TSCCCSEEEECCSCCEEHH
T ss_pred             ----------hHHHHHHh-c--cc--CC------CcCceeEEEEHHHHHHHHHHHHhhhc-cCCCCceEEEeCCCCCCHH
Confidence                      13333333 2  22  24      68899999999999999999999852 1244699999999999999


Q ss_pred             HHHHHHHHHhCCCceEE
Q 028478          161 EMVAAFEKASGKVHIFA  177 (208)
Q Consensus       161 e~~~~i~~~~g~~~~~~  177 (208)
                      |+++.+.+.+|.+.++.
T Consensus       222 e~~~~i~~~~g~~~~~~  238 (286)
T 3gpi_A          222 DLLRWLADRQGIAYPAG  238 (286)
T ss_dssp             HHHHHHHHHTTCCCCCS
T ss_pred             HHHHHHHHHcCCCCCCC
Confidence            99999999999876543

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.85  E-value=3.7e-21  Score=158.93  Aligned_cols=147  Identities=16%  Similarity=0.148  Sum_probs=119.4

Q ss_pred             EEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCCCCCCCCC
Q 028478            8 NLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGEDPRGIPN   87 (208)
Q Consensus         8 ~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~~~~~~~~   87 (208)
                      +|||+||..+||.... +++|+++..|.+.|+.+|.++|.+++.++.++ +++++++|++++|||+.      .......
T Consensus       156 ~~v~~SS~~vyg~~~~-~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~r~~~~~gp~~------~~~~~~~  227 (381)
T 1n7h_A          156 KYYQAGSSEMFGSTPP-PQSETTPFHPRSPYAASKCAAHWYTVNYREAY-GLFACNGILFNHESPRR------GENFVTR  227 (381)
T ss_dssp             EEEEEEEGGGGTTSCS-SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECCEECTTS------CTTSHHH
T ss_pred             EEEEeCcHHHhCCCCC-CCCCCCCCCCCCchHHHHHHHHHHHHHHHHHh-CCcEEEEEeCceeCCCC------CCcchhH
Confidence            9999999999997655 89999999999999999999999999998887 89999999999999842      1111001


Q ss_pred             ChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHHHHHHHHH
Q 028478           88 NLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFE  167 (208)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~  167 (208)
                      .+..++..+..+.. ....++      ++++.++|+|++|+|++++.+++.+     .+++||+++++.+|+.|+++.+.
T Consensus       228 ~~~~~~~~~~~g~~-~~~~~g------~~~~~~~~v~v~Dva~a~~~~~~~~-----~~~~~~i~~~~~~s~~e~~~~i~  295 (381)
T 1n7h_A          228 KITRALGRIKVGLQ-TKLFLG------NLQASRDWGFAGDYVEAMWLMLQQE-----KPDDYVVATEEGHTVEEFLDVSF  295 (381)
T ss_dssp             HHHHHHHHHHHTSC-CCEEES------CTTCEEECEEHHHHHHHHHHHHTSS-----SCCEEEECCSCEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCC-CeEEeC------CCCceeeeEEHHHHHHHHHHHHhCC-----CCCeEEeeCCCCCcHHHHHHHHH
Confidence            12224555666652 334557      7889999999999999999999883     23899999999999999999999


Q ss_pred             HHhCCCc
Q 028478          168 KASGKVH  174 (208)
Q Consensus       168 ~~~g~~~  174 (208)
                      +.+|.+.
T Consensus       296 ~~~g~~~  302 (381)
T 1n7h_A          296 GYLGLNW  302 (381)
T ss_dssp             HHTTCCG
T ss_pred             HHcCCCc
Confidence            9999863

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.84  E-value=3e-20  Score=152.13  Aligned_cols=154  Identities=19%  Similarity=0.225  Sum_probs=120.6

Q ss_pred             CCEEEEeccccccCCCCC-CCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--------CCccEEEEecccccCCCCCC
Q 028478            6 CKNLVFSSSATVYGWPKV-VPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--------SEWKIILLRYFNPVGAHPSG   76 (208)
Q Consensus         6 vk~~i~~SS~~vyg~~~~-~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--------~~~~~~iiR~~~i~G~~~~~   76 (208)
                      +++|||+||..+||.... .+++|+++..|.+.|+.+|.++|.+++.++.++        .+++++++||+.+||++.  
T Consensus       124 ~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~--  201 (357)
T 1rkx_A          124 VKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGD--  201 (357)
T ss_dssp             CCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTC--
T ss_pred             CCeEEEecCHHHhCCCCcCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCC--
Confidence            889999999999996543 468898888899999999999999999987542        179999999999999842  


Q ss_pred             CCCCCCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcC-CCCCCCceEEecCC
Q 028478           77 KIGEDPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLD-DPKIGCEVYNLGTG  154 (208)
Q Consensus        77 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~-~~~~~~~~~ni~~~  154 (208)
                          ..   .+.++. ++..+..+.  ++.+ +      ++++.++|+|++|+|++++.+++... .....+++||++++
T Consensus       202 ----~~---~~~~~~~~~~~~~~g~--~~~~-~------~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~  265 (357)
T 1rkx_A          202 ----WA---LDRIVPDILRAFEQSQ--PVII-R------NPHAIRPWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPN  265 (357)
T ss_dssp             ----CC---SSCHHHHHHHHHHTTC--CEEC-S------CTTCEECCEETHHHHHHHHHHHHHHHHTCGGGCSEEECCCC
T ss_pred             ----Cc---cccHHHHHHHHHhcCC--CEEE-C------CCCCeeccEeHHHHHHHHHHHHHhhhhcCCCCCceEEECCC
Confidence                11   134555 666666665  4444 3      47789999999999999999987521 01134589999974


Q ss_pred             --CCcCHHHHHHHHHHHhCCCceEE
Q 028478          155 --KGTSVLEMVAAFEKASGKVHIFA  177 (208)
Q Consensus       155 --~~~s~~e~~~~i~~~~g~~~~~~  177 (208)
                        +.+|+.|+++.+.+.+|.+.++.
T Consensus       266 ~~~~~s~~e~~~~i~~~~g~~~~~~  290 (357)
T 1rkx_A          266 DADATPVKNIVEQMVKYWGEGASWQ  290 (357)
T ss_dssp             GGGCEEHHHHHHHHHHHHCTTCCEE
T ss_pred             CCCcccHHHHHHHHHHHhCCCCccc
Confidence              68999999999999999876654

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.84  E-value=1e-19  Score=144.95  Aligned_cols=142  Identities=19%  Similarity=0.169  Sum_probs=117.9

Q ss_pred             ccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      ++.++ +|||+||.++|+.....+++|+++..|.+.|+.+|.++|.+++.+     ..+++++||+.+||+.        
T Consensus       102 ~~~~~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~-----~~~~~~lR~~~v~G~~--------  167 (292)
T 1vl0_A          102 YSVGA-EIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKAL-----NPKYYIVRTAWLYGDG--------  167 (292)
T ss_dssp             HHHTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHH-----CSSEEEEEECSEESSS--------
T ss_pred             HHcCC-eEEEechHHeECCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHhh-----CCCeEEEeeeeeeCCC--------
Confidence            34577 999999999999766678999999999999999999999999987     4468999999999971        


Q ss_pred             CCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHH
Q 028478           82 PRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVL  160 (208)
Q Consensus        82 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~  160 (208)
                           ..++. ++..+..+.  ++.+.+        ++.++++|++|+|++++.+++.+     .+++||+++++.+|+.
T Consensus       168 -----~~~~~~~~~~~~~~~--~~~~~~--------~~~~~~i~v~Dva~~~~~~~~~~-----~~~~~~i~~~~~~s~~  227 (292)
T 1vl0_A          168 -----NNFVKTMINLGKTHD--ELKVVH--------DQVGTPTSTVDLARVVLKVIDEK-----NYGTFHCTCKGICSWY  227 (292)
T ss_dssp             -----SCHHHHHHHHHHHCS--EEEEES--------SCEECCEEHHHHHHHHHHHHHHT-----CCEEEECCCBSCEEHH
T ss_pred             -----cChHHHHHHHHhcCC--cEEeec--------CeeeCCccHHHHHHHHHHHHhcC-----CCcEEEecCCCCccHH
Confidence                 12444 455555555  666654        47899999999999999999982     4589999999999999


Q ss_pred             HHHHHHHHHhCCCceEE
Q 028478          161 EMVAAFEKASGKVHIFA  177 (208)
Q Consensus       161 e~~~~i~~~~g~~~~~~  177 (208)
                      |+++.+.+.+|.+.++.
T Consensus       228 e~~~~i~~~~g~~~~~~  244 (292)
T 1vl0_A          228 DFAVEIFRLTGIDVKVT  244 (292)
T ss_dssp             HHHHHHHHHHCCCCEEE
T ss_pred             HHHHHHHHHhCCCCcee
Confidence            99999999999886554

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.84  E-value=6.9e-20  Score=146.33  Aligned_cols=143  Identities=22%  Similarity=0.162  Sum_probs=117.5

Q ss_pred             ccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      ++.++ +|||+||..+|+.....+++|+++..|.+.|+.+|.++|++++.+     ..+++++||+++||+..       
T Consensus        93 ~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~-----~~~~~ilRp~~v~G~~~-------  159 (299)
T 1n2s_A           93 NETGA-WVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQDN-----CPKHLIFRTSWVYAGKG-------  159 (299)
T ss_dssp             TTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHHH-----CSSEEEEEECSEECSSS-------
T ss_pred             HHcCC-cEEEEecccEEeCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHh-----CCCeEEEeeeeecCCCc-------
Confidence            45677 899999999999776678999999999999999999999999987     34789999999999831       


Q ss_pred             CCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCC-CCceEEecCCCCcCH
Q 028478           82 PRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKI-GCEVYNLGTGKGTSV  159 (208)
Q Consensus        82 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~-~~~~~ni~~~~~~s~  159 (208)
                           ..++. ++..+..+.  ++.+.+        ++.++|+|++|+|++++.+++++.. .. .+++||+++++.+|+
T Consensus       160 -----~~~~~~~~~~~~~~~--~~~~~~--------~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~~~i~~~~~~s~  223 (299)
T 1n2s_A          160 -----NNFAKTMLRLAKERQ--TLSVIN--------DQYGAPTGAELLADCTAHAIRVALN-KPEVAGLYHLVAGGTTTW  223 (299)
T ss_dssp             -----CCHHHHHHHHHHHCS--EEEEEC--------SCEECCEEHHHHHHHHHHHHHHHHH-CGGGCEEEECCCBSCEEH
T ss_pred             -----CcHHHHHHHHHhcCC--CEEeec--------CcccCCeeHHHHHHHHHHHHHHhcc-ccccCceEEEeCCCCCCH
Confidence                 12444 555666665  666655        4789999999999999999987310 01 368999999999999


Q ss_pred             HHHHHHHHHHhCCC
Q 028478          160 LEMVAAFEKASGKV  173 (208)
Q Consensus       160 ~e~~~~i~~~~g~~  173 (208)
                      .|+++.+.+.+|.+
T Consensus       224 ~e~~~~i~~~~g~~  237 (299)
T 1n2s_A          224 HDYAALVFDEARKA  237 (299)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCC
Confidence            99999999999876

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.84  E-value=1.2e-20  Score=160.63  Aligned_cols=170  Identities=14%  Similarity=0.091  Sum_probs=122.7

Q ss_pred             CccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCh-----------HHHhHHHHHHHHHHHhhcCCCccEEEEecccc
Q 028478            1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNP-----------YGRTKLFIEEICRDVHRSDSEWKIILLRYFNP   69 (208)
Q Consensus         1 a~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~-----------Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i   69 (208)
                      |++.++++|||+||+++|+.....+++|+++..|.++           |+.+|+++|.+++.+.++. +++++++||++|
T Consensus       201 a~~~~~~~~V~iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-gi~~~ivRpg~v  279 (478)
T 4dqv_A          201 ALTTKLKPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC-ALPVAVFRCGMI  279 (478)
T ss_dssp             HTSSSCCCEEEEEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH-CCCEEEEEECEE
T ss_pred             HHhCCCCeEEEEeehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh-CCCeEEEECcee
Confidence            3567899999999999999766677889887655444           9999999999999998877 899999999999


Q ss_pred             cCCCCCCCCCCCCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCC-CCCCCc
Q 028478           70 VGAHPSGKIGEDPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDD-PKIGCE  147 (208)
Q Consensus        70 ~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~~~~~~  147 (208)
                      ||+....     .......++. ++......+..+..+.+.+.+|..+++.++|+|++|+|++++.++.+... ....++
T Consensus       280 ~G~~~~~-----g~~~~~~~~~~l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~  354 (478)
T 4dqv_A          280 LADTSYA-----GQLNMSDWVTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFA  354 (478)
T ss_dssp             ECCSSSS-----SCCCTTBHHHHHHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEE
T ss_pred             eCCCccC-----CcCCHHHHHHHHHHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCc
Confidence            9974211     1111223443 44444443311222222112222347889999999999999999876211 134569


Q ss_pred             eEEecCCCC--cCHHHHHHHHHHHhCCCceEE
Q 028478          148 VYNLGTGKG--TSVLEMVAAFEKASGKVHIFA  177 (208)
Q Consensus       148 ~~ni~~~~~--~s~~e~~~~i~~~~g~~~~~~  177 (208)
                      +||+++++.  +|+.|+++.+.+. |.+.+..
T Consensus       355 ~ynv~~~~~~~~s~~el~~~l~~~-g~~~~~i  385 (478)
T 4dqv_A          355 TYHVMNPHDDGIGLDEYVDWLIEA-GYPIRRI  385 (478)
T ss_dssp             EEEESCCCCSSCSHHHHHHHHHHT-TCSCEEE
T ss_pred             eEEecCCCCCCcCHHHHHHHHHHc-CCCcccC
Confidence            999999887  9999999999995 8776543

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.83  E-value=1.5e-19  Score=146.80  Aligned_cols=146  Identities=15%  Similarity=0.130  Sum_probs=118.0

Q ss_pred             ccCCCCEEEEeccccccCCCCC--CCCCCCCCCCC----CChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWPKV--VPCTEEFPLEA----MNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPS   75 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~~--~~~~E~~~~~p----~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~   75 (208)
                      ++.++++|||+||..+|+....  .+ +|+++..|    .+.|+.+|.++|.+++.+++.  +++++++||+.+||+...
T Consensus       114 ~~~~~~~~v~~SS~~~~~~~~~~~~~-~E~~~~~p~~~~~~~Y~~sK~~~e~~~~~~~~~--g~~~~ilrp~~v~g~~~~  190 (342)
T 2x4g_A          114 LQARVPRILYVGSAYAMPRHPQGLPG-HEGLFYDSLPSGKSSYVLCKWALDEQAREQARN--GLPVVIGIPGMVLGELDI  190 (342)
T ss_dssp             HHHTCSCEEEECCGGGSCCCTTSSCB-CTTCCCSSCCTTSCHHHHHHHHHHHHHHHHHHT--TCCEEEEEECEEECSCCS
T ss_pred             HHcCCCeEEEECCHHhhCcCCCCCCC-CCCCCCCccccccChHHHHHHHHHHHHHHHhhc--CCcEEEEeCCceECCCCc
Confidence            4568899999999999986543  44 89999888    899999999999999998764  799999999999998420


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           76 GKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                           .    .+ +..++..+..+.  ++.+ +        ++.++|+|++|+|++++.+++++.    .+++||+++++
T Consensus       191 -----~----~~-~~~~~~~~~~~~--~~~~-~--------~~~~~~i~v~Dva~~~~~~~~~~~----~g~~~~v~~~~  245 (342)
T 2x4g_A          191 -----G----PT-TGRVITAIGNGE--MTHY-V--------AGQRNVIDAAEAGRGLLMALERGR----IGERYLLTGHN  245 (342)
T ss_dssp             -----S----CS-TTHHHHHHHTTC--CCEE-E--------CCEEEEEEHHHHHHHHHHHHHHSC----TTCEEEECCEE
T ss_pred             -----c----cc-HHHHHHHHHcCC--Cccc-c--------CCCcceeeHHHHHHHHHHHHhCCC----CCceEEEcCCc
Confidence                 0    11 333555666665  3333 5        457899999999999999999842    26899999999


Q ss_pred             CcCHHHHHHHHHHHhCCCceE
Q 028478          156 GTSVLEMVAAFEKASGKVHIF  176 (208)
Q Consensus       156 ~~s~~e~~~~i~~~~g~~~~~  176 (208)
                       +|+.|+++.+.+.+|.+.++
T Consensus       246 -~s~~e~~~~i~~~~g~~~~~  265 (342)
T 2x4g_A          246 -LEMADLTRRIAELLGQPAPQ  265 (342)
T ss_dssp             -EEHHHHHHHHHHHHTCCCCE
T ss_pred             -ccHHHHHHHHHHHhCCCCCC
Confidence             99999999999999987664

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.81  E-value=3.8e-19  Score=142.25  Aligned_cols=141  Identities=18%  Similarity=0.126  Sum_probs=114.5

Q ss_pred             CCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            5 GCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      +.+++|++||+.+||+....+.+|+++..+.+.|+..|...|...  +.... +++++++|++.|||+.           
T Consensus        99 ~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~~~~~~~~e~~~--~~~~~-~~~~~~~r~~~v~g~~-----------  164 (298)
T 4b4o_A           99 PPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFFSNLVTKWEAAA--RLPGD-STRQVVVRSGVVLGRG-----------  164 (298)
T ss_dssp             CCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHHHHHHHHHHHHH--CCSSS-SSEEEEEEECEEECTT-----------
T ss_pred             CceEEEEEeeeeeecCCCCCcccccCCccccchhHHHHHHHHHHH--Hhhcc-CCceeeeeeeeEEcCC-----------
Confidence            445699999999999888888999999999999998888877653  33444 8999999999999983           


Q ss_pred             CCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHHHHH
Q 028478           85 IPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMV  163 (208)
Q Consensus        85 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~  163 (208)
                        +..+. ++.....+.   ...+|      ++++.++|||++|+|+++..+++++    ...++||+++++++|+.|++
T Consensus       165 --~~~~~~~~~~~~~~~---~~~~g------~g~~~~~~ihv~Dva~a~~~~~~~~----~~~g~yn~~~~~~~t~~e~~  229 (298)
T 4b4o_A          165 --GGAMGHMLLPFRLGL---GGPIG------SGHQFFPWIHIGDLAGILTHALEAN----HVHGVLNGVAPSSATNAEFA  229 (298)
T ss_dssp             --SHHHHHHHHHHHTTC---CCCBT------TSCSBCCEEEHHHHHHHHHHHHHCT----TCCEEEEESCSCCCBHHHHH
T ss_pred             --CCchhHHHHHHhcCC---cceec------ccCceeecCcHHHHHHHHHHHHhCC----CCCCeEEEECCCccCHHHHH
Confidence              12333 444444443   33457      8999999999999999999999983    34479999999999999999


Q ss_pred             HHHHHHhCCCc
Q 028478          164 AAFEKASGKVH  174 (208)
Q Consensus       164 ~~i~~~~g~~~  174 (208)
                      +.+++.+|++.
T Consensus       230 ~~ia~~lgrp~  240 (298)
T 4b4o_A          230 QTFGAALGRRA  240 (298)
T ss_dssp             HHHHHHHTCCC
T ss_pred             HHHHHHhCcCC
Confidence            99999999864

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.81  E-value=3.7e-19  Score=143.18  Aligned_cols=147  Identities=20%  Similarity=0.102  Sum_probs=114.6

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGEDP   82 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~~~   82 (208)
                      +.++ +|||+||..+|+. ...+++|+++..|.+.|+.+|.++|.+++.+     +++++++||+.+||+...      .
T Consensus       100 ~~~~-~~v~~SS~~v~~~-~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~-----~~~~~~lR~~~v~G~~~~------~  166 (315)
T 2ydy_A          100 AVGA-FLIYISSDYVFDG-TNPPYREEDIPAPLNLYGKTKLDGEKAVLEN-----NLGAAVLRIPILYGEVEK------L  166 (315)
T ss_dssp             HHTC-EEEEEEEGGGSCS-SSCSBCTTSCCCCCSHHHHHHHHHHHHHHHH-----CTTCEEEEECSEECSCSS------G
T ss_pred             HcCC-eEEEEchHHHcCC-CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHh-----CCCeEEEeeeeeeCCCCc------c
Confidence            4566 9999999999987 5567999999999999999999999999987     567799999999998421      0


Q ss_pred             CCCCCChHH-HHHHHH-hCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHH
Q 028478           83 RGIPNNLMP-FVTQVA-VGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVL  160 (208)
Q Consensus        83 ~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~  160 (208)
                      .   ..++. ++.... .+.  ++.+.        +++.++++|++|+|++++.+++++......+++||+++++.+|+.
T Consensus       167 ~---~~~~~~~~~~~~~~~~--~~~~~--------~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~i~~~~~~s~~  233 (315)
T 2ydy_A          167 E---ESAVTVMFDKVQFSNK--SANMD--------HWQQRFPTHVKDVATVCRQLAEKRMLDPSIKGTFHWSGNEQMTKY  233 (315)
T ss_dssp             G---GSTTGGGHHHHHCCSS--CEEEE--------CSSBBCCEEHHHHHHHHHHHHHHHHTCTTCCEEEECCCSCCBCHH
T ss_pred             c---ccHHHHHHHHHHhcCC--Ceeec--------cCceECcEEHHHHHHHHHHHHHhhccccCCCCeEEEcCCCcccHH
Confidence            0   12222 444444 454  45443        467889999999999999999863111234589999999999999


Q ss_pred             HHHHHHHHHhCCCce
Q 028478          161 EMVAAFEKASGKVHI  175 (208)
Q Consensus       161 e~~~~i~~~~g~~~~  175 (208)
                      |+++.+.+.+|.+.+
T Consensus       234 e~~~~i~~~~g~~~~  248 (315)
T 2ydy_A          234 EMACAIADAFNLPSS  248 (315)
T ss_dssp             HHHHHHHHHTTCCCT
T ss_pred             HHHHHHHHHhCCChh
Confidence            999999999998754

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.80  E-value=3.1e-19  Score=157.36  Aligned_cols=159  Identities=16%  Similarity=0.226  Sum_probs=123.2

Q ss_pred             ccCCCCEEEEeccccccCCCCCCCCCCCCCC-------CCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWPKVVPCTEEFPL-------EAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHP   74 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~-------~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~   74 (208)
                      ++.+ ++|||+||.++||.....+++|+++.       .|.+.|+.+|.++|.+++.+++++ +++++++||+++||+..
T Consensus       421 ~~~~-~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~-gi~~~ilRpg~v~Gp~~  498 (660)
T 1z7e_A          421 VKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE-GLQFTLFRPFNWMGPRL  498 (660)
T ss_dssp             HHTT-CEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHHHH-CCCEEEEEECSEESTTS
T ss_pred             HHhC-CEEEEEecHHHcCCCCCcccCCCccccccCcccCCCCCcHHHHHHHHHHHHHHHHHc-CCCEEEECCCcccCCCc
Confidence            3456 89999999999997666678888753       456689999999999999998877 99999999999999842


Q ss_pred             CCCCCCCCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecC
Q 028478           75 SGKIGEDPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGT  153 (208)
Q Consensus        75 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~  153 (208)
                      .....  .......++. ++.++..+.  ++.+++      ++++.++|+|++|+|++++.+++.+.. ...+++||+++
T Consensus       499 ~~~~~--~~~~~~~~~~~~~~~~~~g~--~~~~~g------~g~~~~~~i~v~Dva~ai~~~l~~~~~-~~~g~~~ni~~  567 (660)
T 1z7e_A          499 DNLNA--ARIGSSRAITQLILNLVEGS--PIKLID------GGKQKRCFTDIRDGIEALYRIIENAGN-RCDGEIINIGN  567 (660)
T ss_dssp             SCHHH--HTTTCSCHHHHHHHHHHHTC--CEEEEG------GGCCEEECEEHHHHHHHHHHHHHCGGG-TTTTEEEEECC
T ss_pred             ccccc--ccccccchHHHHHHHHHcCC--CcEEeC------CCCeEEEEEEHHHHHHHHHHHHhCccc-cCCCeEEEECC
Confidence            11000  0000123444 667777776  677777      788999999999999999999987321 12468999998


Q ss_pred             CC-CcCHHHHHHHHHHHhCCC
Q 028478          154 GK-GTSVLEMVAAFEKASGKV  173 (208)
Q Consensus       154 ~~-~~s~~e~~~~i~~~~g~~  173 (208)
                      ++ .+|+.|+++.+.+.+|.+
T Consensus       568 ~~~~~s~~el~~~i~~~~g~~  588 (660)
T 1z7e_A          568 PENEASIEELGEMLLASFEKH  588 (660)
T ss_dssp             GGGEEEHHHHHHHHHHHHHHC
T ss_pred             CCCCcCHHHHHHHHHHHhcCC
Confidence            86 899999999999998754

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.80  E-value=9.5e-19  Score=142.31  Aligned_cols=152  Identities=18%  Similarity=0.147  Sum_probs=119.2

Q ss_pred             CCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccC-CCCCCCCCCCCCC
Q 028478            6 CKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVG-AHPSGKIGEDPRG   84 (208)
Q Consensus         6 vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G-~~~~~~~~~~~~~   84 (208)
                      +++||++||..+|+.....+++|+++..|.+.|+.+|.++|.+++.+...+ +++.+++|++.+|| |.      .... 
T Consensus       133 ~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~ir~~~v~g~pg------~~~~-  204 (342)
T 2hrz_A          133 KPRVVFTSSIAVFGAPLPYPIPDEFHTTPLTSYGTQKAICELLLSDYSRRG-FFDGIGIRLPTICIRPG------KPNA-  204 (342)
T ss_dssp             CCEEEEEEEGGGCCSSCCSSBCTTCCCCCSSHHHHHHHHHHHHHHHHHHTT-SCEEEEEEECEETTCCS------SCCC-
T ss_pred             CcEEEEeCchHhhCCCCCCCcCCCCCCCCcchHHHHHHHHHHHHHHHHHhc-CCCceeEEeeeEEecCC------CCcc-
Confidence            789999999999986555679999999999999999999999999998887 89999999999999 52      1111 


Q ss_pred             CCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHHHHH
Q 028478           85 IPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMV  163 (208)
Q Consensus        85 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~  163 (208)
                      ....++. ++.....+.  ++.+.+      .++..++++|++|+|++++.+++.+......+++||++ +..+|+.|++
T Consensus       205 ~~~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~-g~~~s~~e~~  275 (342)
T 2hrz_A          205 AASGFFSNILREPLVGQ--EAVLPV------PESIRHWHASPRSAVGFLIHGAMIDVEKVGPRRNLSMP-GLSATVGEQI  275 (342)
T ss_dssp             SGGGHHHHHHHHHHTTC--CEEECS------CTTCEEEEECHHHHHHHHHHHHHSCHHHHCSCCEEECC-CEEEEHHHHH
T ss_pred             hhHHHHHHHHHHHhcCC--CeeccC------CCccceeeEehHHHHHHHHHHHhccccccCCccEEEcC-CCCCCHHHHH
Confidence            1123444 566666665  444544      45677889999999999999998731100135899996 5679999999


Q ss_pred             HHHHHHhCCCc
Q 028478          164 AAFEKASGKVH  174 (208)
Q Consensus       164 ~~i~~~~g~~~  174 (208)
                      +.+.+.+|.+.
T Consensus       276 ~~i~~~~g~~~  286 (342)
T 2hrz_A          276 EALRKVAGEKA  286 (342)
T ss_dssp             HHHHHHHCHHH
T ss_pred             HHHHHHcCccc
Confidence            99999999864

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.78  E-value=1.1e-18  Score=143.61  Aligned_cols=140  Identities=21%  Similarity=0.187  Sum_probs=114.6

Q ss_pred             CccCCCC-EEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCC
Q 028478            1 MAAHGCK-NLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIG   79 (208)
Q Consensus         1 a~~~~vk-~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~   79 (208)
                      |++.+++ +|||+||..+|+               .+.|+.+|.++|++++.++++. +++++++||+++||++..    
T Consensus        80 ~~~~~~~~~~v~~Ss~~~~~---------------~~~Y~~sK~~~E~~~~~~~~~~-g~~~~i~R~~~v~G~~~~----  139 (369)
T 3st7_A           80 LTRNTKKPAILLSSSIQATQ---------------DNPYGESKLQGEQLLREYAEEY-GNTVYIYRWPNLFGKWCK----  139 (369)
T ss_dssp             HTTCSSCCEEEEEEEGGGGS---------------CSHHHHHHHHHHHHHHHHHHHH-CCCEEEEEECEEECTTCC----
T ss_pred             HHHhCCCCeEEEeCchhhcC---------------CCCchHHHHHHHHHHHHHHHHh-CCCEEEEECCceeCCCCC----
Confidence            3567887 999999999996               5789999999999999998887 899999999999998522    


Q ss_pred             CCCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcC
Q 028478           80 EDPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTS  158 (208)
Q Consensus        80 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s  158 (208)
                        +  ..+.++. ++..+..+.  ++.+ +      ++++.++++|++|+|++++.+++.+..  ..+++||++++..+|
T Consensus       140 --~--~~~~~~~~~~~~~~~~~--~~~~-~------~~~~~~~~i~v~Dva~~~~~~l~~~~~--~~~~~~~i~~~~~~s  204 (369)
T 3st7_A          140 --P--NYNSVIATFCYKIARNE--EIQV-N------DRNVELTLNYVDDIVAEIKRAIEGTPT--IENGVPTVPNVFKVT  204 (369)
T ss_dssp             --T--TSSCHHHHHHHHHHTTC--CCCC-S------CTTCEEEEEEHHHHHHHHHHHHHTCCC--EETTEECCSCCEEEE
T ss_pred             --C--CcchHHHHHHHHHHcCC--CeEe-c------CCCeEEEEEEHHHHHHHHHHHHhCCcc--cCCceEEeCCCCcee
Confidence              1  1245666 666666665  4444 3      688999999999999999999998421  116999999999999


Q ss_pred             HHHHHHHHHHHhCCCce
Q 028478          159 VLEMVAAFEKASGKVHI  175 (208)
Q Consensus       159 ~~e~~~~i~~~~g~~~~  175 (208)
                      +.|+++.+.+.+|.+.+
T Consensus       205 ~~e~~~~~~~~~g~~~~  221 (369)
T 3st7_A          205 LGEIVDLLYKFKQSRLD  221 (369)
T ss_dssp             HHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCcc
Confidence            99999999999987644

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.77  E-value=2.3e-18  Score=144.39  Aligned_cols=147  Identities=15%  Similarity=0.093  Sum_probs=114.9

Q ss_pred             CCCEEEEeccccccCC-----CCCCCCCCCCC---CCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCC
Q 028478            5 GCKNLVFSSSATVYGW-----PKVVPCTEEFP---LEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSG   76 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~-----~~~~~~~E~~~---~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~   76 (208)
                      ++++|||+||+.+ |.     ....+++|+++   ..+.+.|+.+|+++|.+++.+.+ . +++++++||++|||+...+
T Consensus       188 ~~~~~v~~SS~~~-G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~-g~~~~ivRpg~v~G~~~~~  264 (427)
T 4f6c_A          188 HHARLIYVSTISV-GTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN-N-GLDGRIVRVGNLTSPYNGR  264 (427)
T ss_dssp             TTCEEEEEEEGGG-GSEECSSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH-T-TCCEEEEEECCEESCSSSC
T ss_pred             cCCcEEEECchHh-CCCccCCCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHH-c-CCCEEEEeCCeeecCCCCC
Confidence            6789999999998 53     23456888887   55789999999999999999865 4 8999999999999985432


Q ss_pred             CCCCCCCCCCCC-hHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           77 KIGEDPRGIPNN-LMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        77 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                      .+..   ..... +..++.....+.  +++. +      .+++.++|++++|+|++++.++..+    ..+++||+++++
T Consensus       265 ~~~~---~~~~~~~~~~~~~~~~~~--~~~~-~------~~~~~~~~v~v~DvA~ai~~~~~~~----~~g~~~~l~~~~  328 (427)
T 4f6c_A          265 WHMR---NIKTNRFSMVMNDLLQLD--CIGV-S------MAEMPVDFSFVDTTARQIVALAQVN----TPQIIYHVLSPN  328 (427)
T ss_dssp             CCCT---TGGGCHHHHHHHHHHHSS--EEEH-H------HHTCEECCEEHHHHHHHHHHHTTSC----CCCSEEEESCSC
T ss_pred             cccc---CcchHHHHHHHHHHHhcC--CCCC-c------cccceEEEeeHHHHHHHHHHHHcCC----CCCCEEEecCCC
Confidence            2110   11122 334666776665  4543 3      4688999999999999999999884    266999999999


Q ss_pred             CcCHHHHHHHHHHHhC
Q 028478          156 GTSVLEMVAAFEKASG  171 (208)
Q Consensus       156 ~~s~~e~~~~i~~~~g  171 (208)
                      ++++.|+++.+.+ +|
T Consensus       329 ~~s~~el~~~i~~-~g  343 (427)
T 4f6c_A          329 KMPVKSLLECVKR-KE  343 (427)
T ss_dssp             CEEHHHHHHHHHS-SC
T ss_pred             CCcHHHHHHHHHH-cC
Confidence            9999999999998 56

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.77  E-value=3.5e-18  Score=138.56  Aligned_cols=138  Identities=25%  Similarity=0.383  Sum_probs=111.5

Q ss_pred             ccCCCCEEEEeccccccCCCCCC--CCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWPKVV--PCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIG   79 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~~~--~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~   79 (208)
                      ++.++++||++||..+|+.....  +++|++  .|.+.|+.+|.++|.+++.+     +++++++||+++|||+      
T Consensus       124 ~~~~~~~iV~~SS~~~~~~~~~~~~~~~E~~--~~~~~Y~~sK~~~e~~~~~~-----~~~~~~iR~~~v~gp~------  190 (330)
T 2pzm_A          124 SKAGVKRLLNFQTALCYGRPATVPIPIDSPT--APFTSYGISKTAGEAFLMMS-----DVPVVSLRLANVTGPR------  190 (330)
T ss_dssp             HHHTCSEEEEEEEGGGGCSCSSSSBCTTCCC--CCCSHHHHHHHHHHHHHHTC-----SSCEEEEEECEEECTT------
T ss_pred             HHcCCCEEEEecCHHHhCCCccCCCCcCCCC--CCCChHHHHHHHHHHHHHHc-----CCCEEEEeeeeeECcC------
Confidence            34678999999999999865443  788887  77889999999999999876     6889999999999984      


Q ss_pred             CCCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHH-HHHHHhhhcCCCCCCCceEEecCCCCc
Q 028478           80 EDPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLAD-GHIAALHKLDDPKIGCEVYNLGTGKGT  157 (208)
Q Consensus        80 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~-~~~~~~~~~~~~~~~~~~~ni~~~~~~  157 (208)
                      .     ...++. ++..+..+.    .+++      ++. .++++|++|+|+ +++.+++.+    . +++||+++++.+
T Consensus       191 ~-----~~~~~~~~~~~~~~~~----~~~~------~~~-~~~~i~~~Dva~~a~~~~~~~~----~-g~~~~v~~~~~~  249 (330)
T 2pzm_A          191 L-----AIGPIPTFYKRLKAGQ----KCFC------SDT-VRDFLDMSDFLAIADLSLQEGR----P-TGVFNVSTGEGH  249 (330)
T ss_dssp             C-----CSSHHHHHHHHHHTTC----CCCE------ESC-EECEEEHHHHHHHHHHHTSTTC----C-CEEEEESCSCCE
T ss_pred             C-----CCCHHHHHHHHHHcCC----EEeC------CCC-EecceeHHHHHHHHHHHHhhcC----C-CCEEEeCCCCCC
Confidence            1     123444 555555553    3344      566 899999999999 999999873    2 699999999999


Q ss_pred             CHHHHHHHHHHHhCCC
Q 028478          158 SVLEMVAAFEKASGKV  173 (208)
Q Consensus       158 s~~e~~~~i~~~~g~~  173 (208)
                      |+.|+++.+.+.+|.+
T Consensus       250 s~~e~~~~i~~~~g~~  265 (330)
T 2pzm_A          250 SIKEVFDVVLDYVGAT  265 (330)
T ss_dssp             EHHHHHHHHHHHHTCC
T ss_pred             CHHHHHHHHHHHhCCC
Confidence            9999999999999987

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.76  E-value=6.4e-19  Score=151.28  Aligned_cols=144  Identities=17%  Similarity=0.140  Sum_probs=109.8

Q ss_pred             ccCCCCEEEEeccccccC-CCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCC
Q 028478            2 AAHGCKNLVFSSSATVYG-WPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg-~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      ++.++++|||+||+++|| .....+++|+++. +.+.|+.+|..+|.++..+. .. +++++++||+++||+.       
T Consensus       242 ~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~-~~~~y~~~~~~~E~~~~~~~-~~-gi~~~ilRp~~v~Gp~-------  311 (516)
T 3oh8_A          242 ESTQCTTMISASAVGFYGHDRGDEILTEESES-GDDFLAEVCRDWEHATAPAS-DA-GKRVAFIRTGVALSGR-------  311 (516)
T ss_dssp             HCSSCCEEEEEEEGGGGCSEEEEEEECTTSCC-CSSHHHHHHHHHHHTTHHHH-HT-TCEEEEEEECEEEBTT-------
T ss_pred             hcCCCCEEEEeCcceEecCCCCCCccCCCCCC-CcChHHHHHHHHHHHHHHHH-hC-CCCEEEEEeeEEECCC-------
Confidence            456899999999999998 4455578898887 78899999999998876554 44 8999999999999973       


Q ss_pred             CCCCCCCChHHHHHH-HHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCH
Q 028478           81 DPRGIPNNLMPFVTQ-VAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSV  159 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~  159 (208)
                            +.++..+.. +..+.   ...++      ++++.++|+|++|+|++++.+++++    ..+++||+++++.+|+
T Consensus       312 ------~~~~~~~~~~~~~g~---~~~~g------~g~~~~~~i~v~Dva~ai~~~l~~~----~~~g~~ni~~~~~~s~  372 (516)
T 3oh8_A          312 ------GGMLPLLKTLFSTGL---GGKFG------DGTSWFSWIAIDDLTDIYYRAIVDA----QISGPINAVAPNPVSN  372 (516)
T ss_dssp             ------BSHHHHHHHTTC------CCCCT------TSCCEECEEEHHHHHHHHHHHHHCT----TCCEEEEESCSCCEEH
T ss_pred             ------CChHHHHHHHHHhCC---CcccC------CCCceEceEeHHHHHHHHHHHHhCc----ccCCcEEEECCCCCCH
Confidence                  124443333 33332   22456      7899999999999999999999983    3347999999999999


Q ss_pred             HHHHHHHHHHhCCCc
Q 028478          160 LEMVAAFEKASGKVH  174 (208)
Q Consensus       160 ~e~~~~i~~~~g~~~  174 (208)
                      .|+++.+.+.+|.+.
T Consensus       373 ~el~~~i~~~~g~~~  387 (516)
T 3oh8_A          373 ADMTKILATSMHRPA  387 (516)
T ss_dssp             HHHHHHTTC------
T ss_pred             HHHHHHHHHHhCCCC
Confidence            999999999999865

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.76  E-value=3.4e-18  Score=138.63  Aligned_cols=150  Identities=15%  Similarity=0.116  Sum_probs=111.3

Q ss_pred             CCCCEEEEeccccccCCCC----CCCCCCCC----------------CCCCCChHHHhHHHHHHHHHHHhhcC-CCccEE
Q 028478            4 HGCKNLVFSSSATVYGWPK----VVPCTEEF----------------PLEAMNPYGRTKLFIEEICRDVHRSD-SEWKII   62 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~----~~~~~E~~----------------~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~   62 (208)
                      .++++||++||..+|+...    ..+++|++                +..|.+.|+.+|.++|.+++.+++++ +++.++
T Consensus       122 ~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~  201 (342)
T 1y1p_A          122 PSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLN  201 (342)
T ss_dssp             TTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEE
T ss_pred             CCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEE
Confidence            5789999999999986332    14678876                23456789999999999999997764 368899


Q ss_pred             EEecccccCCCCCCCCCCCCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCC
Q 028478           63 LLRYFNPVGAHPSGKIGEDPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDD  141 (208)
Q Consensus        63 iiR~~~i~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~  141 (208)
                      ++||+++||+....      .. ...++. ++..+..+.  ++.+++      ++ +.++|+|++|+|++++.+++++  
T Consensus       202 ~~rp~~v~g~~~~~------~~-~~~~~~~~~~~~~~~~--~~~~~~------~~-~~~~~v~v~Dva~a~~~~~~~~--  263 (342)
T 1y1p_A          202 AVLPNYTIGTIFDP------ET-QSGSTSGWMMSLFNGE--VSPALA------LM-PPQYYVSAVDIGLLHLGCLVLP--  263 (342)
T ss_dssp             EEEESEEECCCSCT------TT-CCCHHHHHHHHHHTTC--CCHHHH------TC-CSEEEEEHHHHHHHHHHHHHCT--
T ss_pred             EEcCCceECCCCCC------CC-CCccHHHHHHHHHcCC--Cccccc------cC-CcCCEeEHHHHHHHHHHHHcCc--
Confidence            99999999985321      11 112444 677777776  444455      44 6789999999999999999873  


Q ss_pred             CCCCCceEEecCCCCcCHHHHHHHHHHHhCCC
Q 028478          142 PKIGCEVYNLGTGKGTSVLEMVAAFEKASGKV  173 (208)
Q Consensus       142 ~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~  173 (208)
                       ...++.+ ++++..+|+.|+++.+.+.+|..
T Consensus       264 -~~~g~~~-~~~g~~~s~~e~~~~i~~~~~~~  293 (342)
T 1y1p_A          264 -QIERRRV-YGTAGTFDWNTVLATFRKLYPSK  293 (342)
T ss_dssp             -TCCSCEE-EECCEEECHHHHHHHHHHHCTTS
T ss_pred             -ccCCceE-EEeCCCCCHHHHHHHHHHHCCCc
Confidence             2233444 45567799999999999999874

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.75  E-value=1e-17  Score=143.39  Aligned_cols=147  Identities=15%  Similarity=0.094  Sum_probs=113.1

Q ss_pred             CCCEEEEeccccccCC-----CCCCCCCCCCC---CCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCC
Q 028478            5 GCKNLVFSSSATVYGW-----PKVVPCTEEFP---LEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSG   76 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~-----~~~~~~~E~~~---~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~   76 (208)
                      ++++|||+||..+ |.     ....+++|+++   ..+.+.|+.+|+++|++++.+.+ . +++++++||++|||+...+
T Consensus       269 ~~~~~v~iSS~~v-G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~-gi~~~ilRp~~v~G~~~~~  345 (508)
T 4f6l_B          269 HHARLIYVSTISV-GTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN-N-GLDGRIVRVGNLTSPYNGR  345 (508)
T ss_dssp             TTCEEEEEEESCT-TSEECTTCSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHH-T-TCEEEEEEECCEESCSSSC
T ss_pred             CCCcEEEeCChhh-ccCCccCCcCcccccccccccccCCCcHHHHHHHHHHHHHHHHH-c-CCCEEEEecceeccCCCCC
Confidence            6789999999999 42     23456888876   44788999999999999999865 4 8999999999999986432


Q ss_pred             CCCCCCCCCCCC-hHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           77 KIGEDPRGIPNN-LMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        77 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                      .+..   ..... +..++.....++  .++. +      ++++.++|+|++|+|++++.++.++    ..+++||++++.
T Consensus       346 ~~~~---~~~~~~~~~~i~~~~~~~--~~~~-~------~g~~~~~~v~v~DvA~ai~~~~~~~----~~~~~~nl~~~~  409 (508)
T 4f6l_B          346 WHMR---NIKTNRFSMVMNDLLQLD--CIGV-S------MAEMPVDFSFVDTTARQIVALAQVN----TPQIIYHVLSPN  409 (508)
T ss_dssp             CCCT---TCTTCHHHHHHHHHTTCS--EEET-T------GGGSEEECEEHHHHHHHHHHHTTBC----CSCSEEEESCSC
T ss_pred             cccC---CcchHHHHHHHHHHHHcC--CCCC-C------ccCceEEEEcHHHHHHHHHHHHhCC----CCCCEEEeCCCC
Confidence            2111   11122 334666665554  4443 2      4688999999999999999999984    256999999999


Q ss_pred             CcCHHHHHHHHHHHh
Q 028478          156 GTSVLEMVAAFEKAS  170 (208)
Q Consensus       156 ~~s~~e~~~~i~~~~  170 (208)
                      ++++.|+++.+.+..
T Consensus       410 ~~s~~el~~~i~~~~  424 (508)
T 4f6l_B          410 KMPVKSLLECVKRKE  424 (508)
T ss_dssp             EEEHHHHHHHHHSSC
T ss_pred             CCCHHHHHHHHHHcC
Confidence            999999999999854

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.75  E-value=2e-17  Score=134.21  Aligned_cols=136  Identities=21%  Similarity=0.309  Sum_probs=109.6

Q ss_pred             ccCCCCEEEEeccccccC----CCCCCCCCCCCCCCCC-ChHHHhHHHHHHHHHH-HhhcCCCccEEEEecccccCCCCC
Q 028478            2 AAHGCKNLVFSSSATVYG----WPKVVPCTEEFPLEAM-NPYGRTKLFIEEICRD-VHRSDSEWKIILLRYFNPVGAHPS   75 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg----~~~~~~~~E~~~~~p~-~~Y~~sK~~~E~~~~~-~~~~~~~~~~~iiR~~~i~G~~~~   75 (208)
                      ++.++++||++||..+|+    .... +++|++  .|. +.|+.+|.++|.+++. +     . +++++||+++||+.  
T Consensus       125 ~~~~~~~iV~~SS~~~~g~~~~~~~~-~~~E~~--~p~~~~Y~~sK~~~E~~~~~s~-----~-~~~ilR~~~v~gp~--  193 (333)
T 2q1w_A          125 KKNNVGRFVYFQTALCYGVKPIQQPV-RLDHPR--NPANSSYAISKSANEDYLEYSG-----L-DFVTFRLANVVGPR--  193 (333)
T ss_dssp             HHTTCSEEEEEEEGGGGCSCCCSSSB-CTTSCC--CCTTCHHHHHHHHHHHHHHHHT-----C-CEEEEEESEEESTT--
T ss_pred             HHhCCCEEEEECcHHHhCCCcccCCC-CcCCCC--CCCCCchHHHHHHHHHHHHhhh-----C-CeEEEeeceEECcC--
Confidence            456889999999999998    5444 788887  677 8999999999999987 5     3 78999999999983  


Q ss_pred             CCCCCCCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCC
Q 028478           76 GKIGEDPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTG  154 (208)
Q Consensus        76 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~  154 (208)
                             .  .+.+++ ++..+..+.  .+  ++       +++.++++|++|+|++++.+++.+    . +++||++++
T Consensus       194 -------~--~~~~~~~~~~~~~~~~--~~--~~-------~~~~~~~i~v~Dva~ai~~~~~~~----~-g~~~~v~~~  248 (333)
T 2q1w_A          194 -------N--VSGPLPIFFQRLSEGK--KC--FV-------TKARRDFVFVKDLARATVRAVDGV----G-HGAYHFSSG  248 (333)
T ss_dssp             -------C--CSSHHHHHHHHHHTTC--CC--EE-------EECEECEEEHHHHHHHHHHHHTTC----C-CEEEECSCS
T ss_pred             -------C--cCcHHHHHHHHHHcCC--ee--eC-------CCceEeeEEHHHHHHHHHHHHhcC----C-CCEEEeCCC
Confidence                   0  123455 555555554  22  22       356789999999999999999883    2 699999999


Q ss_pred             CCcCHHHHHHHHHHHhCCC
Q 028478          155 KGTSVLEMVAAFEKASGKV  173 (208)
Q Consensus       155 ~~~s~~e~~~~i~~~~g~~  173 (208)
                      ..+|+.|+++.+.+.+|.+
T Consensus       249 ~~~s~~e~~~~i~~~~g~~  267 (333)
T 2q1w_A          249 TDVAIKELYDAVVEAMALP  267 (333)
T ss_dssp             CCEEHHHHHHHHHHHTTCS
T ss_pred             CCccHHHHHHHHHHHhCCC
Confidence            9999999999999999987

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.73  E-value=5.5e-17  Score=132.79  Aligned_cols=147  Identities=21%  Similarity=0.170  Sum_probs=111.6

Q ss_pred             CCCEEE-------EeccccccCCC--CCCCCCCCCCCCC-CChHHHhHHHHHHHHHHHhhcCCC-ccEEEEecccccCCC
Q 028478            5 GCKNLV-------FSSSATVYGWP--KVVPCTEEFPLEA-MNPYGRTKLFIEEICRDVHRSDSE-WKIILLRYFNPVGAH   73 (208)
Q Consensus         5 ~vk~~i-------~~SS~~vyg~~--~~~~~~E~~~~~p-~~~Y~~sK~~~E~~~~~~~~~~~~-~~~~iiR~~~i~G~~   73 (208)
                      +++++|       |+||..+||..  ...+++|+++..| .+.|    ..+|++++.+.+.+ + ++++++||+++||+.
T Consensus       111 ~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~~~~~~~~y----~~~E~~~~~~~~~~-~~~~~~ilRp~~v~G~~  185 (364)
T 2v6g_A          111 NLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFY----YDLEDIMLEEVEKK-EGLTWSVHRPGNIFGFS  185 (364)
T ss_dssp             TCCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSCCCSSCCHH----HHHHHHHHHHHTTS-TTCEEEEEEESSEECCC
T ss_pred             ccceEEeccCceEEEechhhccccccCCCCCCccccCCccchhh----HHHHHHHHHHhhcC-CCceEEEECCCceeCCC
Confidence            788997       89999999864  3457899988765 6778    45899999988776 6 999999999999984


Q ss_pred             CCCCCCCCCCCCCCChHHH-HHHHH---hCCCCeeEEEccccCCCCCcc---eeeeeeHHHHHHHHHHHhhhcCCCCCCC
Q 028478           74 PSGKIGEDPRGIPNNLMPF-VTQVA---VGRRPELTVFGTDYSTKDGTG---VRDYIHVIDLADGHIAALHKLDDPKIGC  146 (208)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~---~~~~i~v~D~a~~~~~~~~~~~~~~~~~  146 (208)
                      ..        ...+.+.+. +.+..   .+.  ++.+.|      ++++   ..+++|++|+|++++.+++++.   ..+
T Consensus       186 ~~--------~~~~~~~~~~~~~~~~~~~g~--~~~~~g------~~~~~~~~~~~~~v~Dva~a~~~~~~~~~---~~g  246 (364)
T 2v6g_A          186 PY--------SMMNLVGTLCVYAAICKHEGK--VLRFTG------CKAAWDGYSDCSDADLIAEHHIWAAVDPY---AKN  246 (364)
T ss_dssp             TT--------CSSCHHHHHHHHHHHHHHHTC--CBCCCS------CHHHHHSCBCCEEHHHHHHHHHHHHHCGG---GTT
T ss_pred             CC--------cccchHHHHHHHHHHHHhcCC--ceecCC------CcccccccCCCCcHHHHHHHHHHHHhCCC---CCC
Confidence            21        111333342 33333   455  566666      6643   4678888999999999998731   245


Q ss_pred             ceEEecCCCCcCHHHHHHHHHHHhCCCce
Q 028478          147 EVYNLGTGKGTSVLEMVAAFEKASGKVHI  175 (208)
Q Consensus       147 ~~~ni~~~~~~s~~e~~~~i~~~~g~~~~  175 (208)
                      ++||+++++.+|+.|+++.+.+.+|.+..
T Consensus       247 ~~~ni~~~~~~s~~e~~~~i~~~~g~~~~  275 (364)
T 2v6g_A          247 EAFNVSNGDVFKWKHFWKVLAEQFGVECG  275 (364)
T ss_dssp             EEEEECCSCCBCHHHHHHHHHHHHTCCBC
T ss_pred             ceEEecCCCcCCHHHHHHHHHHHhCCCCC
Confidence            89999999999999999999999998654

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.72  E-value=1.2e-16  Score=125.68  Aligned_cols=135  Identities=16%  Similarity=0.110  Sum_probs=108.8

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGEDP   82 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~~~   82 (208)
                      +.++ +||++||..+|+... .+++|+++..|.+.|+.+|.++|.+++.       ++++++|++.+||+          
T Consensus        97 ~~~~-~iv~~SS~~~~~~~~-~~~~e~~~~~~~~~Y~~sK~~~e~~~~~-------~~~~~iR~~~v~G~----------  157 (273)
T 2ggs_A           97 VIDS-YIVHISTDYVFDGEK-GNYKEEDIPNPINYYGLSKLLGETFALQ-------DDSLIIRTSGIFRN----------  157 (273)
T ss_dssp             HTTC-EEEEEEEGGGSCSSS-CSBCTTSCCCCSSHHHHHHHHHHHHHCC-------TTCEEEEECCCBSS----------
T ss_pred             HhCC-eEEEEecceeEcCCC-CCcCCCCCCCCCCHHHHHHHHHHHHHhC-------CCeEEEeccccccc----------
Confidence            4566 999999999998543 3789999988999999999999999874       45689999999983          


Q ss_pred             CCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHHH
Q 028478           83 RGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLE  161 (208)
Q Consensus        83 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e  161 (208)
                          ..+.. ++.....+.  ++.+.+      +   .++++|++|+|++++.+++++    . +++||+++ +.+|+.|
T Consensus       158 ----~~~~~~~~~~~~~~~--~~~~~~------~---~~~~~~~~dva~~i~~~~~~~----~-~g~~~i~~-~~~s~~e  216 (273)
T 2ggs_A          158 ----KGFPIYVYKTLKEGK--TVFAFK------G---YYSPISARKLASAILELLELR----K-TGIIHVAG-ERISRFE  216 (273)
T ss_dssp             ----SSHHHHHHHHHHTTC--CEEEES------C---EECCCBHHHHHHHHHHHHHHT----C-CEEEECCC-CCEEHHH
T ss_pred             ----cHHHHHHHHHHHcCC--CEEeec------C---CCCceEHHHHHHHHHHHHhcC----c-CCeEEECC-CcccHHH
Confidence                12344 334455555  566655      3   789999999999999999883    2 46999998 8999999


Q ss_pred             HHHHHHHHhCCCceEE
Q 028478          162 MVAAFEKASGKVHIFA  177 (208)
Q Consensus       162 ~~~~i~~~~g~~~~~~  177 (208)
                      +++.+.+.+|.+.++.
T Consensus       217 ~~~~~~~~~g~~~~~~  232 (273)
T 2ggs_A          217 LALKIKEKFNLPGEVK  232 (273)
T ss_dssp             HHHHHHHHTTCCSCEE
T ss_pred             HHHHHHHHhCCChhhc
Confidence            9999999999986654

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.66  E-value=8.3e-16  Score=125.50  Aligned_cols=129  Identities=19%  Similarity=0.272  Sum_probs=101.9

Q ss_pred             ccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIG   79 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~   79 (208)
                      ++.++++||++||..++.              |.+.|+.+|.++|.+++.+....  .+++++++||+++||++      
T Consensus       130 ~~~~v~~~V~~SS~~~~~--------------p~~~Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~------  189 (344)
T 2gn4_A          130 LKNAISQVIALSTDKAAN--------------PINLYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSR------  189 (344)
T ss_dssp             HHTTCSEEEEECCGGGSS--------------CCSHHHHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCT------
T ss_pred             HhCCCCEEEEecCCccCC--------------CccHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCC------
Confidence            457899999999976652              46799999999999999987642  27999999999999973      


Q ss_pred             CCCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcC
Q 028478           80 EDPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTS  158 (208)
Q Consensus        80 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s  158 (208)
                             +.+++ ++..+..++ .++++.       ++...|+|+|++|+|++++.+++++    ..+++|++.++ .++
T Consensus       190 -------~~~i~~~~~~~~~g~-~~~~i~-------~~~~~r~~i~v~D~a~~v~~~l~~~----~~g~~~~~~~~-~~s  249 (344)
T 2gn4_A          190 -------GSVVPFFKKLVQNKA-SEIPIT-------DIRMTRFWITLDEGVSFVLKSLKRM----HGGEIFVPKIP-SMK  249 (344)
T ss_dssp             -------TSHHHHHHHHHHHTC-CCEEES-------CTTCEEEEECHHHHHHHHHHHHHHC----CSSCEEEECCC-EEE
T ss_pred             -------CCHHHHHHHHHHcCC-CceEEe-------CCCeEEeeEEHHHHHHHHHHHHhhc----cCCCEEecCCC-cEE
Confidence                   23556 445555554 145553       5788899999999999999999983    45689998765 599


Q ss_pred             HHHHHHHHHHHh
Q 028478          159 VLEMVAAFEKAS  170 (208)
Q Consensus       159 ~~e~~~~i~~~~  170 (208)
                      +.|+++.+.+.+
T Consensus       250 ~~el~~~i~~~~  261 (344)
T 2gn4_A          250 MTDLAKALAPNT  261 (344)
T ss_dssp             HHHHHHHHCTTC
T ss_pred             HHHHHHHHHHhC
Confidence            999999998754

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.65  E-value=4.9e-16  Score=119.22  Aligned_cols=128  Identities=14%  Similarity=0.036  Sum_probs=95.3

Q ss_pred             ccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      ++.++++||++||..+|+.... ...|+++..|.+.|+.+|..+|.+++.+.+.. +++++++||+.+||+...      
T Consensus       100 ~~~~~~~~v~~Ss~~~~~~~~~-~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~-~~~~~ilrp~~v~g~~~~------  171 (227)
T 3dhn_A          100 KKAGVNRFLMVGGAGSLFIAPG-LRLMDSGEVPENILPGVKALGEFYLNFLMKEK-EIDWVFFSPAADMRPGVR------  171 (227)
T ss_dssp             HHTTCSEEEEECCSTTSEEETT-EEGGGTTCSCGGGHHHHHHHHHHHHHTGGGCC-SSEEEEEECCSEEESCCC------
T ss_pred             HHhCCCEEEEeCChhhccCCCC-CccccCCcchHHHHHHHHHHHHHHHHHHhhcc-CccEEEEeCCcccCCCcc------
Confidence            4678999999999987764322 24567777889999999999999999998777 999999999999998421      


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHHH
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLE  161 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e  161 (208)
                      ...    +       ..+...++  .       .++. ++|+|++|+|++++.+++++   ...+++|+++++++.++++
T Consensus       172 ~~~----~-------~~~~~~~~--~-------~~~~-~~~i~~~Dva~ai~~~l~~~---~~~g~~~~~~~~~~~~~~~  227 (227)
T 3dhn_A          172 TGR----Y-------RLGKDDMI--V-------DIVG-NSHISVEDYAAAMIDELEHP---KHHQERFTIGYLEHHHHHH  227 (227)
T ss_dssp             CCC----C-------EEESSBCC--C-------CTTS-CCEEEHHHHHHHHHHHHHSC---CCCSEEEEEECCSCCC---
T ss_pred             ccc----e-------eecCCCcc--c-------CCCC-CcEEeHHHHHHHHHHHHhCc---cccCcEEEEEeehhcccCC
Confidence            111    0       01221122  1       1222 89999999999999999995   3556999999999988864

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.64  E-value=1.9e-15  Score=119.68  Aligned_cols=129  Identities=16%  Similarity=0.093  Sum_probs=100.7

Q ss_pred             ccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      ++.++++||++||..+|+.              ...|+.+|..+|++++..     +++++++||+.++++.        
T Consensus        92 ~~~~~~~~v~~Ss~~~~~~--------------~~~y~~sK~~~e~~~~~~-----~~~~~ilrp~~~~~~~--------  144 (286)
T 2zcu_A           92 KAAGVKFIAYTSLLHADTS--------------PLGLADEHIETEKMLADS-----GIVYTLLRNGWYSENY--------  144 (286)
T ss_dssp             HHHTCCEEEEEEETTTTTC--------------CSTTHHHHHHHHHHHHHH-----CSEEEEEEECCBHHHH--------
T ss_pred             HHcCCCEEEEECCCCCCCC--------------cchhHHHHHHHHHHHHHc-----CCCeEEEeChHHhhhh--------
Confidence            4568999999999888721              147999999999998753     8999999998766631        


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHHH
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLE  161 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e  161 (208)
                              ..++.+...++  .+. ++      .+++.++++|++|+|+++..+++++.   ..+++||+++++.+|+.|
T Consensus       145 --------~~~~~~~~~~~--~~~-~~------~~~~~~~~i~~~Dva~~~~~~~~~~~---~~g~~~~i~~~~~~s~~e  204 (286)
T 2zcu_A          145 --------LASAPAALEHG--VFI-GA------AGDGKIASATRADYAAAAARVISEAG---HEGKVYELAGDSAWTLTQ  204 (286)
T ss_dssp             --------HTTHHHHHHHT--EEE-ES------CTTCCBCCBCHHHHHHHHHHHHHSSS---CTTCEEEECCSSCBCHHH
T ss_pred             --------HHHhHHhhcCC--cee-cc------CCCCccccccHHHHHHHHHHHhcCCC---CCCceEEEeCCCcCCHHH
Confidence                    11233333333  444 45      67888999999999999999998742   356899999998999999


Q ss_pred             HHHHHHHHhCCCceEE
Q 028478          162 MVAAFEKASGKVHIFA  177 (208)
Q Consensus       162 ~~~~i~~~~g~~~~~~  177 (208)
                      +++.+.+.+|.+.++.
T Consensus       205 ~~~~i~~~~g~~~~~~  220 (286)
T 2zcu_A          205 LAAELTKQSGKQVTYQ  220 (286)
T ss_dssp             HHHHHHHHHSSCCEEE
T ss_pred             HHHHHHHHHCCCCcee
Confidence            9999999999987654

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.64  E-value=1.8e-15  Score=119.93  Aligned_cols=131  Identities=16%  Similarity=0.146  Sum_probs=101.1

Q ss_pred             CccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCC
Q 028478            1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         1 a~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      |++.++++||++||..+|+.              ...|+.+|..+|++++.    . +++++++||+.++|+..      
T Consensus        94 ~~~~~~~~~v~~Ss~~~~~~--------------~~~y~~~K~~~E~~~~~----~-~~~~~ilrp~~~~~~~~------  148 (287)
T 2jl1_A           94 ARDAGVKHIAYTGYAFAEES--------------IIPLAHVHLATEYAIRT----T-NIPYTFLRNALYTDFFV------  148 (287)
T ss_dssp             HHHTTCSEEEEEEETTGGGC--------------CSTHHHHHHHHHHHHHH----T-TCCEEEEEECCBHHHHS------
T ss_pred             HHHcCCCEEEEECCCCCCCC--------------CCchHHHHHHHHHHHHH----c-CCCeEEEECCEeccccc------
Confidence            35678999999999888631              13799999999999875    3 89999999998887520      


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHH
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVL  160 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~  160 (208)
                           ..    ++......+  ... .+      .+++.++|+|++|+|+++..+++++   ...+++||+++++.+|+.
T Consensus       149 -----~~----~~~~~~~~~--~~~-~~------~~~~~~~~i~~~Dva~~~~~~~~~~---~~~g~~~~i~~~~~~s~~  207 (287)
T 2jl1_A          149 -----NE----GLRASTESG--AIV-TN------AGSGIVNSVTRNELALAAATVLTEE---GHENKTYNLVSNQPWTFD  207 (287)
T ss_dssp             -----SG----GGHHHHHHT--EEE-ES------CTTCCBCCBCHHHHHHHHHHHHTSS---SCTTEEEEECCSSCBCHH
T ss_pred             -----hh----hHHHHhhCC--cee-cc------CCCCccCccCHHHHHHHHHHHhcCC---CCCCcEEEecCCCcCCHH
Confidence                 01    222333323  232 34      5778899999999999999999873   235689999999899999


Q ss_pred             HHHHHHHHHhCCCceEE
Q 028478          161 EMVAAFEKASGKVHIFA  177 (208)
Q Consensus       161 e~~~~i~~~~g~~~~~~  177 (208)
                      |+++.+.+.+|.+.++.
T Consensus       208 e~~~~i~~~~g~~~~~~  224 (287)
T 2jl1_A          208 ELAQILSEVSGKKVVHQ  224 (287)
T ss_dssp             HHHHHHHHHHSSCCEEE
T ss_pred             HHHHHHHHHHCCcceEE
Confidence            99999999999987654

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.63  E-value=4.3e-15  Score=119.52  Aligned_cols=145  Identities=17%  Similarity=0.147  Sum_probs=99.8

Q ss_pred             ccC-CCCEEEEecccccc-CCC-CCCCCCCCCCC--------CCCC-hHHHhHHHHHHHHHHHhhcCCCccEEEEecccc
Q 028478            2 AAH-GCKNLVFSSSATVY-GWP-KVVPCTEEFPL--------EAMN-PYGRTKLFIEEICRDVHRSDSEWKIILLRYFNP   69 (208)
Q Consensus         2 ~~~-~vk~~i~~SS~~vy-g~~-~~~~~~E~~~~--------~p~~-~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i   69 (208)
                      ++. ++++||++||..++ +.. ...+++|+++.        .|.. .|+.+|.++|.+++++.+.+ +++++++||+++
T Consensus       112 ~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~-gi~~~~lrp~~v  190 (322)
T 2p4h_X          112 VNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQN-GIDVVTLILPFI  190 (322)
T ss_dssp             TTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEECEE
T ss_pred             HhcCCccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCcccccHHHHHHHHHHHHHHHHHhc-CCcEEEEcCCce
Confidence            344 78999999998754 432 22356776532        2333 69999999999999988777 899999999999


Q ss_pred             cCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceE
Q 028478           70 VGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVY  149 (208)
Q Consensus        70 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~  149 (208)
                      ||+...      ..  ....+..+.....+..  .. ++      .  ...+|+|++|+|++++.+++.+   ... +.|
T Consensus       191 ~g~~~~------~~--~~~~~~~~~~~~~g~~--~~-~~------~--~~~~~i~v~Dva~a~~~~~~~~---~~~-g~~  247 (322)
T 2p4h_X          191 VGRFVC------PK--LPDSIEKALVLVLGKK--EQ-IG------V--TRFHMVHVDDVARAHIYLLENS---VPG-GRY  247 (322)
T ss_dssp             ESCCCS------SS--CCHHHHHHTHHHHSCG--GG-CC------E--EEEEEEEHHHHHHHHHHHHHSC---CCC-EEE
T ss_pred             ECCCCC------CC--CCchHHHHHHHHhCCC--cc-Cc------C--CCcCEEEHHHHHHHHHHHhhCc---CCC-CCE
Confidence            998422      11  1112222223344542  11 12      2  2348999999999999999763   123 458


Q ss_pred             EecCCCCcCHHHHHHHHHHHhC
Q 028478          150 NLGTGKGTSVLEMVAAFEKASG  171 (208)
Q Consensus       150 ni~~~~~~s~~e~~~~i~~~~g  171 (208)
                      | +++..+|+.|+++.+.+.++
T Consensus       248 ~-~~~~~~s~~e~~~~i~~~~~  268 (322)
T 2p4h_X          248 N-CSPFIVPIEEMSQLLSAKYP  268 (322)
T ss_dssp             E-CCCEEEEHHHHHHHHHHHCT
T ss_pred             E-EcCCCCCHHHHHHHHHHhCC
Confidence            8 56778999999999998764

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.61  E-value=1.6e-15  Score=123.00  Aligned_cols=145  Identities=17%  Similarity=0.134  Sum_probs=97.5

Q ss_pred             cCC-CCEEEEecccc-ccCCCC-CCCCCCCCCCC---------CCChHHHhHHHHHHHHHHHhhcCCCccEEEEeccccc
Q 028478            3 AHG-CKNLVFSSSAT-VYGWPK-VVPCTEEFPLE---------AMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPV   70 (208)
Q Consensus         3 ~~~-vk~~i~~SS~~-vyg~~~-~~~~~E~~~~~---------p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~   70 (208)
                      +.+ +++|||+||+. +|+... ..+++|+++..         +.+.|+.+|.++|.+++.+.+.+ +++++++||++||
T Consensus       116 ~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-gi~~~~lrp~~v~  194 (337)
T 2c29_D          116 AAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKEN-NIDFITIIPTLVV  194 (337)
T ss_dssp             HHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEECEEE
T ss_pred             hCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCccchHHHHHHHHHHHHHHHHHHc-CCcEEEEeCCceE
Confidence            445 89999999987 455322 23467765321         34579999999999999988776 8999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEE
Q 028478           71 GAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYN  150 (208)
Q Consensus        71 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~n  150 (208)
                      |+...      .. . ...+........+.  +. .++      .+. ...|+|++|+|++++.+++++    ..++.|+
T Consensus       195 Gp~~~------~~-~-~~~~~~~~~~~~g~--~~-~~~------~~~-~~~~i~v~Dva~a~~~~~~~~----~~~~~~~  252 (337)
T 2c29_D          195 GPFIM------SS-M-PPSLITALSPITGN--EA-HYS------IIR-QGQFVHLDDLCNAHIYLFENP----KAEGRYI  252 (337)
T ss_dssp             SCCSC------SS-C-CHHHHHHTHHHHTC--GG-GHH------HHT-EEEEEEHHHHHHHHHHHHHCT----TCCEEEE
T ss_pred             CCCCC------CC-C-CchHHHHHHHHcCC--Cc-ccc------ccC-CCCEEEHHHHHHHHHHHhcCc----ccCceEE
Confidence            98421      11 0 11111111123343  11 122      222 234999999999999999872    2235786


Q ss_pred             ecCCCCcCHHHHHHHHHHHhC
Q 028478          151 LGTGKGTSVLEMVAAFEKASG  171 (208)
Q Consensus       151 i~~~~~~s~~e~~~~i~~~~g  171 (208)
                      +++ ..+|+.|+++.+.+.++
T Consensus       253 ~~~-~~~s~~e~~~~i~~~~~  272 (337)
T 2c29_D          253 CSS-HDCIILDLAKMLREKYP  272 (337)
T ss_dssp             ECC-EEEEHHHHHHHHHHHCT
T ss_pred             EeC-CCCCHHHHHHHHHHHCC
Confidence            654 55899999999999874

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.61  E-value=2.1e-16  Score=128.28  Aligned_cols=147  Identities=18%  Similarity=0.136  Sum_probs=99.0

Q ss_pred             ccCC-CCEEEEecccc-ccCCC---CCCCCCCCCCC--------CCC-ChHHHhHHHHHHHHHHHhhcCCCccEEEEecc
Q 028478            2 AAHG-CKNLVFSSSAT-VYGWP---KVVPCTEEFPL--------EAM-NPYGRTKLFIEEICRDVHRSDSEWKIILLRYF   67 (208)
Q Consensus         2 ~~~~-vk~~i~~SS~~-vyg~~---~~~~~~E~~~~--------~p~-~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~   67 (208)
                      ++.+ +++|||+||.+ +|+..   ...+++|+++.        .|. ..|+.+|.++|.+++.+.+.+ +++++++||+
T Consensus       118 ~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-gi~~~~lrp~  196 (338)
T 2rh8_A          118 TRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEEN-NIDLITVIPT  196 (338)
T ss_dssp             HHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CCCCCCTTSCCHHHHHHHHHHHHH-TCCEEEEEEC
T ss_pred             HHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCccchHHHHHHHHHHHHHHHHHHc-CCcEEEEeCC
Confidence            3454 89999999987 44321   11257777532        122 269999999999999988776 8999999999


Q ss_pred             cccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCc------ceeeeeeHHHHHHHHHHHhhhcCC
Q 028478           68 NPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGT------GVRDYIHVIDLADGHIAALHKLDD  141 (208)
Q Consensus        68 ~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~i~v~D~a~~~~~~~~~~~~  141 (208)
                      +|||+....      .  ....+..+.....+.  +. .++      .+.      ..++|+|++|+|++++.+++++  
T Consensus       197 ~v~Gp~~~~------~--~~~~~~~~~~~~~g~--~~-~~~------~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~--  257 (338)
T 2rh8_A          197 LMAGSSLTS------D--VPSSIGLAMSLITGN--EF-LIN------GMKGMQMLSGSVSIAHVEDVCRAHIFVAEKE--  257 (338)
T ss_dssp             EEESCCSSS------S--CCHHHHHHHHHHHTC--HH-HHH------HHHHHHHHHSSEEEEEHHHHHHHHHHHHHCT--
T ss_pred             ceECCCCCC------C--CCchHHHHHHHHcCC--cc-ccc------cccccccccCcccEEEHHHHHHHHHHHHcCC--
Confidence            999984221      1  112222222334443  11 111      111      1248999999999999999872  


Q ss_pred             CCCCCceEEecCCCCcCHHHHHHHHHHHhC
Q 028478          142 PKIGCEVYNLGTGKGTSVLEMVAAFEKASG  171 (208)
Q Consensus       142 ~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g  171 (208)
                        ..++.|+++++ .+|+.|+++.+.+.++
T Consensus       258 --~~~~~~~~~~~-~~s~~e~~~~l~~~~~  284 (338)
T 2rh8_A          258 --SASGRYICCAA-NTSVPELAKFLSKRYP  284 (338)
T ss_dssp             --TCCEEEEECSE-EECHHHHHHHHHHHCT
T ss_pred             --CcCCcEEEecC-CCCHHHHHHHHHHhCC
Confidence              23367888754 5899999999999876

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.58  E-value=2.7e-15  Score=117.95  Aligned_cols=128  Identities=20%  Similarity=0.191  Sum_probs=104.6

Q ss_pred             ccCCCCEEEEeccccccCCC-CCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWP-KVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~-~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      ++.++++||++||..+|+.. ...+++|+++..|.+.|+.+|.++|.+++.+.+.+ +++++++||+.+|+..       
T Consensus        98 ~~~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-gi~~~~lrp~~v~~~~-------  169 (267)
T 3ay3_A           98 RNLGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLASLYYHKF-DIETLNIRIGSCFPKP-------  169 (267)
T ss_dssp             HHTTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHTT-CCCEEEEEECBCSSSC-------
T ss_pred             HHhCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHc-CCCEEEEeceeecCCC-------
Confidence            45688999999999999853 34679999999999999999999999999988777 9999999999999520       


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHH
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVL  160 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~  160 (208)
                        .                               ++...++|+|++|+|+++..+++++   ...+++|++.++...++.
T Consensus       170 --~-------------------------------~~~~~~~~~~~~dva~~~~~~~~~~---~~~~~~~~~~~~~~~~~~  213 (267)
T 3ay3_A          170 --K-------------------------------DARMMATWLSVDDFMRLMKRAFVAP---KLGCTVVYGASANTESWW  213 (267)
T ss_dssp             --C-------------------------------SHHHHHHBCCHHHHHHHHHHHHHSS---CCCEEEEEECCSCSSCCB
T ss_pred             --C-------------------------------CCCeeeccccHHHHHHHHHHHHhCC---CCCceeEecCCCcccccc
Confidence              0                               1233567999999999999999883   223478999888878888


Q ss_pred             HHHHHHHHHhCCCce
Q 028478          161 EMVAAFEKASGKVHI  175 (208)
Q Consensus       161 e~~~~i~~~~g~~~~  175 (208)
                      ++.+.  +.+|.++.
T Consensus       214 d~~~~--~~lg~~p~  226 (267)
T 3ay3_A          214 DNDKS--AFLGWVPQ  226 (267)
T ss_dssp             CCGGG--GGGCCCCC
T ss_pred             CHHHH--HHcCCCCC
Confidence            88777  77887754

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.54  E-value=1.9e-14  Score=117.21  Aligned_cols=143  Identities=12%  Similarity=0.106  Sum_probs=107.9

Q ss_pred             ccCC-CCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCC
Q 028478            2 AAHG-CKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         2 ~~~~-vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      ++.| +++||+ |   +||.    +.+|+.+..|.+.|+.+|..+|++++..     +++++++||+.++|...+.    
T Consensus       107 ~~~g~v~~~v~-S---~~g~----~~~e~~~~~p~~~y~~sK~~~e~~l~~~-----g~~~tivrpg~~~g~~~~~----  169 (346)
T 3i6i_A          107 KAVGTIKRFLP-S---EFGH----DVNRADPVEPGLNMYREKRRVRQLVEES-----GIPFTYICCNSIASWPYYN----  169 (346)
T ss_dssp             HHHCCCSEEEC-S---CCSS----CTTTCCCCTTHHHHHHHHHHHHHHHHHT-----TCCBEEEECCEESSCCCSC----
T ss_pred             HHcCCceEEee-c---ccCC----CCCccCcCCCcchHHHHHHHHHHHHHHc-----CCCEEEEEecccccccCcc----
Confidence            4567 989886 3   4652    3567777788889999999999999863     8999999999999963211    


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecC-CCCcCH
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGT-GKGTSV  159 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~-~~~~s~  159 (208)
                              +.........++  .+.++|      ++++.++|+|++|+|++++.++..+   ...+++|++.+ ++.+|+
T Consensus       170 --------~~~~~~~~~~~~--~~~~~g------~g~~~~~~i~~~Dva~~~~~~l~~~---~~~~~~~~i~g~~~~~s~  230 (346)
T 3i6i_A          170 --------NIHPSEVLPPTD--FFQIYG------DGNVKAYFVAGTDIGKFTMKTVDDV---RTLNKSVHFRPSCNCLNI  230 (346)
T ss_dssp             --------C-----CCCCSS--CEEEET------TSCCCEEEECHHHHHHHHHHHTTCG---GGTTEEEECCCGGGEECH
T ss_pred             --------ccccccccCCCc--eEEEcc------CCCceEEecCHHHHHHHHHHHHhCc---cccCeEEEEeCCCCCCCH
Confidence                    111111111233  678888      8999999999999999999999985   23458899974 578999


Q ss_pred             HHHHHHHHHHhCCCceEEEee
Q 028478          160 LEMVAAFEKASGKVHIFALFC  180 (208)
Q Consensus       160 ~e~~~~i~~~~g~~~~~~~~~  180 (208)
                      .|+++.+.+.+|.+.++....
T Consensus       231 ~e~~~~~~~~~g~~~~~~~~~  251 (346)
T 3i6i_A          231 NELASVWEKKIGRTLPRVTVT  251 (346)
T ss_dssp             HHHHHHHHHHHTSCCCEEEEC
T ss_pred             HHHHHHHHHHHCCCCceEecC
Confidence            999999999999987765433

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.51  E-value=3e-14  Score=112.17  Aligned_cols=127  Identities=19%  Similarity=0.181  Sum_probs=102.4

Q ss_pred             ccCCCCEEEEeccccccCC-CCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGW-PKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~-~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      ++.++++||++||..+||. ....+++|+.+..|.+.|+.+|.++|.+++.+++++ +++++++||+.++|+.       
T Consensus        99 ~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~a~~~-g~~~~~vr~~~v~~~~-------  170 (267)
T 3rft_A           99 RAHGQPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYGVSKCFGENLARMYFDKF-GQETALVRIGSCTPEP-------  170 (267)
T ss_dssp             HHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-CCCEEEEEECBCSSSC-------
T ss_pred             HHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh-CCeEEEEEeecccCCC-------
Confidence            4568899999999999974 345578999999999999999999999999998888 9999999999999851       


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHH
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVL  160 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~  160 (208)
                                                 +      ++...++|++++|+++++..+++.+   .....++++.+++..++.
T Consensus       171 ---------------------------~------~~~~~~~~~~~~d~a~~~~~~~~~~---~~~~~~~~~~s~~~~~~~  214 (267)
T 3rft_A          171 ---------------------------N------NYRMLSTWFSHDDFVSLIEAVFRAP---VLGCPVVWGASANDAGWW  214 (267)
T ss_dssp             ---------------------------C------STTHHHHBCCHHHHHHHHHHHHHCS---CCCSCEEEECCCCTTCCB
T ss_pred             ---------------------------C------CCCceeeEEcHHHHHHHHHHHHhCC---CCCceEEEEeCCCCCCcc
Confidence                                       1      3455678999999999999999884   233467888888777776


Q ss_pred             HHHHHHHHHhCCCc
Q 028478          161 EMVAAFEKASGKVH  174 (208)
Q Consensus       161 e~~~~i~~~~g~~~  174 (208)
                      ++...  +.+|..+
T Consensus       215 ~~~~~--~~~g~~p  226 (267)
T 3rft_A          215 DNSHL--GFLGWKP  226 (267)
T ss_dssp             CCGGG--GGGCCCC
T ss_pred             cChhH--HHCCCCC
Confidence            65433  5667654

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.49  E-value=4.2e-14  Score=107.97  Aligned_cols=117  Identities=14%  Similarity=0.105  Sum_probs=90.0

Q ss_pred             ccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      ++.++++||++||..+++..   +.+| .+..|.+.|+.+|.++|++++   +.. +++++++||+.+||+...      
T Consensus        94 ~~~~~~~iv~~SS~~~~~~~---~~~e-~~~~~~~~Y~~sK~~~e~~~~---~~~-~i~~~ilrp~~v~g~~~~------  159 (219)
T 3dqp_A           94 EKAEVKRFILLSTIFSLQPE---KWIG-AGFDALKDYYIAKHFADLYLT---KET-NLDYTIIQPGALTEEEAT------  159 (219)
T ss_dssp             HHTTCCEEEEECCTTTTCGG---GCCS-HHHHHTHHHHHHHHHHHHHHH---HSC-CCEEEEEEECSEECSCCC------
T ss_pred             HHhCCCEEEEECcccccCCC---cccc-cccccccHHHHHHHHHHHHHH---hcc-CCcEEEEeCceEecCCCC------
Confidence            56789999999998777532   3445 445567899999999999997   344 899999999999997311      


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHHH
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLE  161 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e  161 (208)
                                       +   .+. .        ++..+++++++|+|++++.+++++   ...+++||++++. .++.|
T Consensus       160 -----------------~---~~~-~--------~~~~~~~i~~~Dva~~i~~~l~~~---~~~g~~~~i~~g~-~~~~e  206 (219)
T 3dqp_A          160 -----------------G---LID-I--------NDEVSASNTIGDVADTIKELVMTD---HSIGKVISMHNGK-TAIKE  206 (219)
T ss_dssp             -----------------S---EEE-E--------SSSCCCCEEHHHHHHHHHHHHTCG---GGTTEEEEEEECS-EEHHH
T ss_pred             -----------------C---ccc-c--------CCCcCCcccHHHHHHHHHHHHhCc---cccCcEEEeCCCC-ccHHH
Confidence                             1   122 1        355788999999999999999984   2346999998775 89998


Q ss_pred             HHHH
Q 028478          162 MVAA  165 (208)
Q Consensus       162 ~~~~  165 (208)
                      +.+.
T Consensus       207 ~~~~  210 (219)
T 3dqp_A          207 ALES  210 (219)
T ss_dssp             HHHT
T ss_pred             HHHH
Confidence            8764

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.48  E-value=9e-14  Score=105.85  Aligned_cols=129  Identities=10%  Similarity=0.043  Sum_probs=69.8

Q ss_pred             CccCCCCEEEEeccccccC-CCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhh-cCCCccEEEEecccccCCCCCCCC
Q 028478            1 MAAHGCKNLVFSSSATVYG-WPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHR-SDSEWKIILLRYFNPVGAHPSGKI   78 (208)
Q Consensus         1 a~~~~vk~~i~~SS~~vyg-~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~-~~~~~~~~iiR~~~i~G~~~~~~~   78 (208)
                      |++.+++++|++||..++. .....+..|+.+..|.+.|+.+|..+|.+. .+.+ .. +++++++||+.+||+...   
T Consensus        90 ~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~-~~~~~~~-gi~~~ivrp~~v~g~~~~---  164 (221)
T 3ew7_A           90 LNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLE-HLKSHQA-EFSWTYISPSAMFEPGER---  164 (221)
T ss_dssp             HCSCCSSEEEEECCCC-------------------CCCSCCHHHHHHHHH-HHHTTTT-TSCEEEEECSSCCCCC-----
T ss_pred             HHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHHHHHHHHHHHHHH-HHHhhcc-CccEEEEeCcceecCCCc---
Confidence            3566889999999987654 433345677778888899999999999873 3333 54 899999999999997210   


Q ss_pred             CCCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcC
Q 028478           79 GEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTS  158 (208)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s  158 (208)
                         ..    .   +.   ..+.  .+.+.+      ++   .++++++|+|++++.+++++   ...++.||++++...+
T Consensus       165 ---~~----~---~~---~~~~--~~~~~~------~~---~~~i~~~Dva~~~~~~l~~~---~~~g~~~~~~~~~~~~  217 (221)
T 3ew7_A          165 ---TG----D---YQ---IGKD--HLLFGS------DG---NSFISMEDYAIAVLDEIERP---NHLNEHFTVAGKLEHH  217 (221)
T ss_dssp             -------------------------------------------CCCHHHHHHHHHHHHHSC---SCTTSEEECCC-----
T ss_pred             ---cC----c---eE---eccc--cceecC------CC---CceEeHHHHHHHHHHHHhCc---cccCCEEEECCCCccc
Confidence               00    0   10   1111  334433      33   36899999999999999995   3456999999988777


Q ss_pred             HHH
Q 028478          159 VLE  161 (208)
Q Consensus       159 ~~e  161 (208)
                      ..|
T Consensus       218 ~~~  220 (221)
T 3ew7_A          218 HHH  220 (221)
T ss_dssp             ---
T ss_pred             ccc
Confidence            654

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.46  E-value=1.9e-13  Score=111.87  Aligned_cols=139  Identities=14%  Similarity=0.104  Sum_probs=97.6

Q ss_pred             ccCC-CCEEEEecccc--ccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCC
Q 028478            2 AAHG-CKNLVFSSSAT--VYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKI   78 (208)
Q Consensus         2 ~~~~-vk~~i~~SS~~--vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~   78 (208)
                      ++.| +++||++||..  .|+.            .+.+.|+.+|..+|++++.+     +++++++||+ +||+..... 
T Consensus       100 ~~~g~v~~~V~~SS~~~~~~~~------------~~~~~y~~sK~~~E~~~~~~-----gi~~~ivrpg-~~g~~~~~~-  160 (352)
T 1xgk_A          100 KRAGTIQHYIYSSMPDHSLYGP------------WPAVPMWAPKFTVENYVRQL-----GLPSTFVYAG-IYNNNFTSL-  160 (352)
T ss_dssp             HHHSCCSEEEEEECCCGGGTSS------------CCCCTTTHHHHHHHHHHHTS-----SSCEEEEEEC-EEGGGCBSS-
T ss_pred             HHcCCccEEEEeCCccccccCC------------CCCccHHHHHHHHHHHHHHc-----CCCEEEEecc-eecCCchhc-
Confidence            4567 99999999975  3431            23467999999999999863     7999999965 788642110 


Q ss_pred             CCCCCCCCCChHHHHHHH-HhCCCCeeEEEccccCCCCCcceeeeeeH-HHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           79 GEDPRGIPNNLMPFVTQV-AVGRRPELTVFGTDYSTKDGTGVRDYIHV-IDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v-~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                                +.+++... ...+...+.+.+      ++++.++++|+ +|+|++++.+++++.. ...+++||+++ ..
T Consensus       161 ----------~~~~~~~~~~~~g~~~~~~~~------~~~~~~~~i~v~~Dva~ai~~~l~~~~~-~~~g~~~~l~~-~~  222 (352)
T 1xgk_A          161 ----------PYPLFQMELMPDGTFEWHAPF------DPDIPLPWLDAEHDVGPALLQIFKDGPQ-KWNGHRIALTF-ET  222 (352)
T ss_dssp             ----------SCSSCBEEECTTSCEEEEESS------CTTSCEEEECHHHHHHHHHHHHHHHCHH-HHTTCEEEECS-EE
T ss_pred             ----------ccccccccccCCCceEEeecc------CCCCceeeEecHHHHHHHHHHHHhCCch-hhCCeEEEEec-CC
Confidence                      00011001 112211234455      67888999999 8999999999987210 12468999995 56


Q ss_pred             cCHHHHHHHHHHHhCCCceEE
Q 028478          157 TSVLEMVAAFEKASGKVHIFA  177 (208)
Q Consensus       157 ~s~~e~~~~i~~~~g~~~~~~  177 (208)
                      +|+.|+++.+.+.+|.+.++.
T Consensus       223 ~s~~e~~~~i~~~~G~~~~~~  243 (352)
T 1xgk_A          223 LSPVQVCAAFSRALNRRVTYV  243 (352)
T ss_dssp             ECHHHHHHHHHHHHTSCEEEE
T ss_pred             CCHHHHHHHHHHHHCCCCceE
Confidence            999999999999999986654

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.44  E-value=2e-13  Score=105.39  Aligned_cols=117  Identities=15%  Similarity=0.130  Sum_probs=88.7

Q ss_pred             ccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      ++.++++||++||...+..       |..+ .+.+.|+.+|.++|.+++.    . +++++++||+.++|+..       
T Consensus       119 ~~~~~~~iv~~SS~~~~~~-------~~~~-~~~~~Y~~sK~~~e~~~~~----~-gi~~~~lrpg~v~~~~~-------  178 (236)
T 3e8x_A          119 EKRGIKRFIMVSSVGTVDP-------DQGP-MNMRHYLVAKRLADDELKR----S-SLDYTIVRPGPLSNEES-------  178 (236)
T ss_dssp             HHHTCCEEEEECCTTCSCG-------GGSC-GGGHHHHHHHHHHHHHHHH----S-SSEEEEEEECSEECSCC-------
T ss_pred             HHcCCCEEEEEecCCCCCC-------CCCh-hhhhhHHHHHHHHHHHHHH----C-CCCEEEEeCCcccCCCC-------
Confidence            4568899999999544321       2222 4567899999999999873    3 89999999999999731       


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHHH
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLE  161 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e  161 (208)
                                       ..  .+...+      .+...+++++++|+|++++.+++++.   ..+++||++++ .+++.|
T Consensus       179 -----------------~~--~~~~~~------~~~~~~~~i~~~Dva~~~~~~~~~~~---~~g~~~~v~~~-~~~~~e  229 (236)
T 3e8x_A          179 -----------------TG--KVTVSP------HFSEITRSITRHDVAKVIAELVDQQH---TIGKTFEVLNG-DTPIAK  229 (236)
T ss_dssp             -----------------CS--EEEEES------SCSCCCCCEEHHHHHHHHHHHTTCGG---GTTEEEEEEEC-SEEHHH
T ss_pred             -----------------CC--eEEecc------CCCcccCcEeHHHHHHHHHHHhcCcc---ccCCeEEEeCC-CcCHHH
Confidence                             11  233444      45567899999999999999999842   45699999887 499999


Q ss_pred             HHHHHH
Q 028478          162 MVAAFE  167 (208)
Q Consensus       162 ~~~~i~  167 (208)
                      +++.|.
T Consensus       230 ~~~~i~  235 (236)
T 3e8x_A          230 VVEQLG  235 (236)
T ss_dssp             HHHTC-
T ss_pred             HHHHhc
Confidence            998765

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.44  E-value=1.2e-12  Score=103.77  Aligned_cols=130  Identities=18%  Similarity=0.256  Sum_probs=92.6

Q ss_pred             CccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCC
Q 028478            1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         1 a~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      |++.|+++|||+||.   +...      ..+.    .+...+..+|..+...     +++++++||+.++|+        
T Consensus        93 a~~~gv~~iv~~Ss~---~~~~------~~~~----~~~~~~~~~e~~~~~~-----g~~~~ilrp~~~~~~--------  146 (289)
T 3e48_A           93 AKQSGVAHIIFIGYY---ADQH------NNPF----HMSPYFGYASRLLSTS-----GIDYTYVRMAMYMDP--------  146 (289)
T ss_dssp             HHHTTCCEEEEEEES---CCST------TCCS----TTHHHHHHHHHHHHHH-----CCEEEEEEECEESTT--------
T ss_pred             HHHcCCCEEEEEccc---CCCC------CCCC----ccchhHHHHHHHHHHc-----CCCEEEEeccccccc--------
Confidence            356799999999994   3211      1111    1222234555555533     899999999999996        


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHH
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVL  160 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~  160 (208)
                              +..++.....+.  . ..++      .++..++|++++|+|++++.++.++.   ..+++||++ ++.+|+.
T Consensus       147 --------~~~~~~~~~~~~--~-~~~~------~g~~~~~~i~~~Dva~~~~~~l~~~~---~~g~~~~~~-~~~~s~~  205 (289)
T 3e48_A          147 --------LKPYLPELMNMH--K-LIYP------AGDGRINYITRNDIARGVIAIIKNPD---TWGKRYLLS-GYSYDMK  205 (289)
T ss_dssp             --------HHHHHHHHHHHT--E-ECCC------CTTCEEEEECHHHHHHHHHHHHHCGG---GTTCEEEEC-CEEEEHH
T ss_pred             --------cHHHHHHHHHCC--C-EecC------CCCceeeeEEHHHHHHHHHHHHcCCC---cCCceEEeC-CCcCCHH
Confidence                    222344444433  2 2334      67889999999999999999999842   236899999 9999999


Q ss_pred             HHHHHHHHHhCCCceEE
Q 028478          161 EMVAAFEKASGKVHIFA  177 (208)
Q Consensus       161 e~~~~i~~~~g~~~~~~  177 (208)
                      |+++.+.+.+|.+.++.
T Consensus       206 e~~~~~~~~~g~~~~~~  222 (289)
T 3e48_A          206 ELAAILSEASGTEIKYE  222 (289)
T ss_dssp             HHHHHHHHHHTSCCEEC
T ss_pred             HHHHHHHHHHCCceeEE
Confidence            99999999999986654

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.44  E-value=7.2e-14  Score=111.49  Aligned_cols=136  Identities=21%  Similarity=0.108  Sum_probs=98.3

Q ss_pred             ccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      ++.|+++||++||..+|+...      .   .+...|+.+|..+|++++..     +++++++||+.+||+....     
T Consensus       103 ~~~gv~~iv~~S~~~~~~~~~------~---~~~~~y~~sK~~~e~~~~~~-----gi~~~ilrp~~~~~~~~~~-----  163 (299)
T 2wm3_A          103 RRLGLHYVVYSGLENIKKLTA------G---RLAAAHFDGKGEVEEYFRDI-----GVPMTSVRLPCYFENLLSH-----  163 (299)
T ss_dssp             HHHTCSEEEECCCCCHHHHTT------T---SCCCHHHHHHHHHHHHHHHH-----TCCEEEEECCEEGGGGGTT-----
T ss_pred             HHcCCCEEEEEcCccccccCC------C---cccCchhhHHHHHHHHHHHC-----CCCEEEEeecHHhhhchhh-----
Confidence            467899999998888876311      1   13578999999999998864     8999999999999963110     


Q ss_pred             CCCCCCChHHHHHH-HHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHH
Q 028478           82 PRGIPNNLMPFVTQ-VAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVL  160 (208)
Q Consensus        82 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~  160 (208)
                                ++.. ...++ ......+      .++..++|+|++|+|+++..++.++.  ...+++|++++ +.+|+.
T Consensus       164 ----------~~~~~~~~g~-~~~~~~~------~~~~~~~~i~~~Dva~~~~~~l~~~~--~~~g~~~~~~g-~~~s~~  223 (299)
T 2wm3_A          164 ----------FLPQKAPDGK-SYLLSLP------TGDVPMDGMSVSDLGPVVLSLLKMPE--KYVGQNIGLST-CRHTAE  223 (299)
T ss_dssp             ----------TCCEECTTSS-SEEECCC------CTTSCEEEECGGGHHHHHHHHHHSHH--HHTTCEEECCS-EEECHH
T ss_pred             ----------cCCcccCCCC-EEEEEec------CCCCccceecHHHHHHHHHHHHcChh--hhCCeEEEeee-ccCCHH
Confidence                      0000 11121 1111122      46778999999999999999998631  12458999986 579999


Q ss_pred             HHHHHHHHHhCCCceE
Q 028478          161 EMVAAFEKASGKVHIF  176 (208)
Q Consensus       161 e~~~~i~~~~g~~~~~  176 (208)
                      |+++.+.+.+|.+.+.
T Consensus       224 e~~~~~~~~~g~~~~~  239 (299)
T 2wm3_A          224 EYAALLTKHTRKVVHD  239 (299)
T ss_dssp             HHHHHHHHHHSSCEEE
T ss_pred             HHHHHHHHHHCCCcee
Confidence            9999999999998654

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.41  E-value=1.1e-12  Score=100.02  Aligned_cols=127  Identities=9%  Similarity=-0.039  Sum_probs=84.2

Q ss_pred             CccCCCCEEEEeccccccC-CCCC--CCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCC
Q 028478            1 MAAHGCKNLVFSSSATVYG-WPKV--VPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGK   77 (208)
Q Consensus         1 a~~~~vk~~i~~SS~~vyg-~~~~--~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~   77 (208)
                      |++.+ +++|++||+..+. ....  .+.+|+....|.+.|+.+|..+|.+ ..+.+.. +++++++||+.+||+.... 
T Consensus        93 ~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~-~~~~~~~-~i~~~ivrp~~v~g~~~~~-  168 (224)
T 3h2s_A           93 LRNSD-TLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQYYEY-QFLQMNA-NVNWIGISPSEAFPSGPAT-  168 (224)
T ss_dssp             CTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHHHHHHHHHHH-HHHTTCT-TSCEEEEEECSBCCCCCCC-
T ss_pred             HHHcC-CcEEEEecceeeccCCCCccccccCCCCCccchhhHHHHHHHHHH-HHHHhcC-CCcEEEEcCccccCCCccc-
Confidence            46678 8999999976543 3222  2345555555688999999999954 5555555 8999999999999973110 


Q ss_pred             CCCCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCc
Q 028478           78 IGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGT  157 (208)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~  157 (208)
                               + +.       .+. ..+.         .+...+++++++|+|++++.+++++   ...+++|++++.+..
T Consensus       169 ---------~-~~-------~~~-~~~~---------~~~~~~~~i~~~DvA~~~~~~l~~~---~~~g~~~~~~~~~~~  218 (224)
T 3h2s_A          169 ---------S-YV-------AGK-DTLL---------VGEDGQSHITTGNMALAILDQLEHP---TAIRDRIVVRDADLE  218 (224)
T ss_dssp             ---------C-EE-------EES-SBCC---------CCTTSCCBCCHHHHHHHHHHHHHSC---CCTTSEEEEEECC--
T ss_pred             ---------C-ce-------ecc-cccc---------cCCCCCceEeHHHHHHHHHHHhcCc---cccCCEEEEecCcch
Confidence                     0 00       111 0222         1344578999999999999999985   345699999987766


Q ss_pred             CHHH
Q 028478          158 SVLE  161 (208)
Q Consensus       158 s~~e  161 (208)
                      ++.+
T Consensus       219 ~~~~  222 (224)
T 3h2s_A          219 HHHH  222 (224)
T ss_dssp             ----
T ss_pred             hccc
Confidence            5543

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.33  E-value=1.4e-12  Score=104.49  Aligned_cols=142  Identities=12%  Similarity=0.067  Sum_probs=96.7

Q ss_pred             CccCC-CCEEEEeccccccCCCCCCCCCCCCCCCC-CChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCC
Q 028478            1 MAAHG-CKNLVFSSSATVYGWPKVVPCTEEFPLEA-MNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKI   78 (208)
Q Consensus         1 a~~~~-vk~~i~~SS~~vyg~~~~~~~~E~~~~~p-~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~   78 (208)
                      |++.| +++||+ |   +||......   +.+..| .+.| .+|..+|++++..     +++++++||+.++|...+.. 
T Consensus       103 a~~~g~v~~~v~-S---~~g~~~~~~---~~~~~p~~~~y-~sK~~~e~~~~~~-----g~~~~ilrp~~~~~~~~~~~-  168 (313)
T 1qyd_A          103 IKEAGNIKRFLP-S---EFGMDPDIM---EHALQPGSITF-IDKRKVRRAIEAA-----SIPYTYVSSNMFAGYFAGSL-  168 (313)
T ss_dssp             HHHSCCCSEEEC-S---CCSSCTTSC---CCCCSSTTHHH-HHHHHHHHHHHHT-----TCCBCEEECCEEHHHHTTTS-
T ss_pred             HHhcCCCceEEe-c---CCcCCcccc---ccCCCCCcchH-HHHHHHHHHHHhc-----CCCeEEEEeceecccccccc-
Confidence            34577 999985 3   465322111   223334 4568 9999999988743     89999999999888421100 


Q ss_pred             CCCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCC-CCc
Q 028478           79 GEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTG-KGT  157 (208)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~-~~~  157 (208)
                          ..   .. .  .....++  .+.+++      +++..+++++++|+|+++..+++++.   ..++.|++.++ +.+
T Consensus       169 ----~~---~~-~--~~~~~~~--~~~~~~------~g~~~~~~i~~~Dva~~~~~~l~~~~---~~~~~~~~~g~~~~~  227 (313)
T 1qyd_A          169 ----AQ---LD-G--HMMPPRD--KVLIYG------DGNVKGIWVDEDDVGTYTIKSIDDPQ---TLNKTMYIRPPMNIL  227 (313)
T ss_dssp             ----SC---TT-C--CSSCCSS--EECCBT------TSCSEEEEECHHHHHHHHHHHTTCGG---GSSSEEECCCGGGEE
T ss_pred             ----cc---cc-c--cccCCCC--eEEEeC------CCCceEEEEEHHHHHHHHHHHHhCcc---cCCceEEEeCCCCcc
Confidence                00   00 0  0001222  556667      78889999999999999999998742   33577877754 689


Q ss_pred             CHHHHHHHHHHHhCCCceEE
Q 028478          158 SVLEMVAAFEKASGKVHIFA  177 (208)
Q Consensus       158 s~~e~~~~i~~~~g~~~~~~  177 (208)
                      |+.|+++.+.+.+|.+.++.
T Consensus       228 s~~e~~~~~~~~~g~~~~~~  247 (313)
T 1qyd_A          228 SQKEVIQIWERLSEQNLDKI  247 (313)
T ss_dssp             EHHHHHHHHHHHHTCCCEEC
T ss_pred             CHHHHHHHHHHhcCCCCceE
Confidence            99999999999999987654

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.32  E-value=4.3e-12  Score=102.09  Aligned_cols=137  Identities=14%  Similarity=0.073  Sum_probs=98.0

Q ss_pred             ccCC-CCEEEEeccccccCCCCCCCCCCCCCCCC-CChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCC
Q 028478            2 AAHG-CKNLVFSSSATVYGWPKVVPCTEEFPLEA-MNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIG   79 (208)
Q Consensus         2 ~~~~-vk~~i~~SS~~vyg~~~~~~~~E~~~~~p-~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~   79 (208)
                      ++.| +++||+ |   +||..    .+|..+..| .+.| .+|..+|++++..     +++++++||+.+++.       
T Consensus       101 ~~~g~v~~~v~-S---~~g~~----~~~~~~~~p~~~~y-~sK~~~e~~~~~~-----~~~~~~lrp~~~~~~-------  159 (321)
T 3c1o_A          101 KAAGNIKRFLP-S---DFGCE----EDRIKPLPPFESVL-EKKRIIRRAIEAA-----ALPYTYVSANCFGAY-------  159 (321)
T ss_dssp             HHHCCCCEEEC-S---CCSSC----GGGCCCCHHHHHHH-HHHHHHHHHHHHH-----TCCBEEEECCEEHHH-------
T ss_pred             HHhCCccEEec-c---ccccC----ccccccCCCcchHH-HHHHHHHHHHHHc-----CCCeEEEEeceeccc-------
Confidence            4567 999883 3   45531    123333334 4579 9999999998753     799999999888874       


Q ss_pred             CCCCCCCCChHHHHHH----HHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecC-C
Q 028478           80 EDPRGIPNNLMPFVTQ----VAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGT-G  154 (208)
Q Consensus        80 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~-~  154 (208)
                               +.+.+..    ...++  .+.+++      +++..+++++++|+|+++..++.++.   ..++.|++.+ +
T Consensus       160 ---------~~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~~i~~~Dva~~~~~~l~~~~---~~g~~~~~~g~~  219 (321)
T 3c1o_A          160 ---------FVNYLLHPSPHPNRND--DIVIYG------TGETKFVLNYEEDIAKYTIKVACDPR---CCNRIVIYRPPK  219 (321)
T ss_dssp             ---------HHHHHHCCCSSCCTTS--CEEEET------TSCCEEEEECHHHHHHHHHHHHHCGG---GTTEEEECCCGG
T ss_pred             ---------cccccccccccccccC--ceEEec------CCCcceeEeeHHHHHHHHHHHHhCcc---ccCeEEEEeCCC
Confidence                     1111111    11222  566777      78899999999999999999998742   3357888875 4


Q ss_pred             CCcCHHHHHHHHHHHhCCCceEEEe
Q 028478          155 KGTSVLEMVAAFEKASGKVHIFALF  179 (208)
Q Consensus       155 ~~~s~~e~~~~i~~~~g~~~~~~~~  179 (208)
                      +.+|+.|+++.+.+.+|.+.++...
T Consensus       220 ~~~t~~e~~~~~~~~~g~~~~~~~~  244 (321)
T 3c1o_A          220 NIISQNELISLWEAKSGLSFKKVHM  244 (321)
T ss_dssp             GEEEHHHHHHHHHHHHTSCCCEEEE
T ss_pred             CcccHHHHHHHHHHHcCCcceeeeC
Confidence            7899999999999999998776533

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.29  E-value=8.4e-12  Score=100.26  Aligned_cols=137  Identities=15%  Similarity=0.073  Sum_probs=97.4

Q ss_pred             ccCC-CCEEEEeccccccCCCCCCCCCCCCCCCC-CChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCC
Q 028478            2 AAHG-CKNLVFSSSATVYGWPKVVPCTEEFPLEA-MNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIG   79 (208)
Q Consensus         2 ~~~~-vk~~i~~SS~~vyg~~~~~~~~E~~~~~p-~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~   79 (208)
                      ++.| +++||+ |   +||..    .+|..+..| .+.| .+|..+|++++..     +++++++||+.+++.       
T Consensus       103 ~~~g~v~~~v~-S---~~g~~----~~~~~~~~p~~~~y-~sK~~~e~~~~~~-----~~~~~~lr~~~~~~~-------  161 (318)
T 2r6j_A          103 KVAGNIKRFLP-S---DFGVE----EDRINALPPFEALI-ERKRMIRRAIEEA-----NIPYTYVSANCFASY-------  161 (318)
T ss_dssp             HHHCCCCEEEC-S---CCSSC----TTTCCCCHHHHHHH-HHHHHHHHHHHHT-----TCCBEEEECCEEHHH-------
T ss_pred             HhcCCCCEEEe-e---ccccC----cccccCCCCcchhH-HHHHHHHHHHHhc-----CCCeEEEEcceehhh-------
Confidence            4567 999884 3   35531    233333333 3468 9999999988753     899999999877763       


Q ss_pred             CCCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecC-CCCc
Q 028478           80 EDPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGT-GKGT  157 (208)
Q Consensus        80 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~-~~~~  157 (208)
                               +.+ ++.....++  .+.+++      +++..++|++++|+|+++..+++++.   ..++.|++.+ ++.+
T Consensus       162 ---------~~~~~~~~~~~~~--~~~~~~------~~~~~~~~i~~~Dva~~~~~~l~~~~---~~~~~~~~~g~~~~~  221 (318)
T 2r6j_A          162 ---------FINYLLRPYDPKD--EITVYG------TGEAKFAMNYEQDIGLYTIKVATDPR---ALNRVVIYRPSTNII  221 (318)
T ss_dssp             ---------HHHHHHCTTCCCS--EEEEET------TSCCEEEEECHHHHHHHHHHHTTCGG---GTTEEEECCCGGGEE
T ss_pred             ---------hhhhhccccCCCC--ceEEec------CCCceeeEeeHHHHHHHHHHHhcCcc---ccCeEEEecCCCCcc
Confidence                     222 111112233  677777      78899999999999999999998742   2357777764 4789


Q ss_pred             CHHHHHHHHHHHhCCCceEEEe
Q 028478          158 SVLEMVAAFEKASGKVHIFALF  179 (208)
Q Consensus       158 s~~e~~~~i~~~~g~~~~~~~~  179 (208)
                      |+.|+++.+.+.+|.+.++...
T Consensus       222 s~~e~~~~~~~~~g~~~~~~~~  243 (318)
T 2r6j_A          222 TQLELISRWEKKIGKKFKKIHV  243 (318)
T ss_dssp             EHHHHHHHHHHHHTCCCEEEEE
T ss_pred             CHHHHHHHHHHHhCCCCceeec
Confidence            9999999999999998776533

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.29  E-value=6.1e-13  Score=100.83  Aligned_cols=110  Identities=16%  Similarity=0.092  Sum_probs=79.3

Q ss_pred             ccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCcc-EEEEecccccCCCCCCCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK-IILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~-~~iiR~~~i~G~~~~~~~~~   80 (208)
                      ++.++++||++||..+|+.             +.+.|+.+|.++|++++.+     +++ ++++||+.+||+...     
T Consensus       102 ~~~~~~~~v~~Ss~~~~~~-------------~~~~y~~sK~~~e~~~~~~-----~~~~~~~vrp~~v~g~~~~-----  158 (215)
T 2a35_A          102 LEMGARHYLVVSALGADAK-------------SSIFYNRVKGELEQALQEQ-----GWPQLTIARPSLLFGPREE-----  158 (215)
T ss_dssp             HHTTCCEEEEECCTTCCTT-------------CSSHHHHHHHHHHHHHTTS-----CCSEEEEEECCSEESTTSC-----
T ss_pred             HHcCCCEEEEECCcccCCC-------------CccHHHHHHHHHHHHHHHc-----CCCeEEEEeCceeeCCCCc-----
Confidence            4568899999999988852             3578999999999998753     788 999999999998421     


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHH
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVL  160 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~  160 (208)
                            ..+..   ... +.  ..++ +      ++  .++++|++|+|++++.+++++     .+++||+++++.+++.
T Consensus       159 ------~~~~~---~~~-~~--~~~~-~------~~--~~~~i~~~Dva~~~~~~~~~~-----~~~~~~i~~~~~~~~~  212 (215)
T 2a35_A          159 ------FRLAE---ILA-AP--IARI-L------PG--KYHGIEACDLARALWRLALEE-----GKGVRFVESDELRKLG  212 (215)
T ss_dssp             ------EEGGG---GTT-CC--CC-----------C--HHHHHHHHHHHHHHHHHHTCC-----CSEEEEEEHHHHHHHH
T ss_pred             ------chHHH---HHH-Hh--hhhc-c------CC--CcCcEeHHHHHHHHHHHHhcC-----CCCceEEcHHHHHHhh
Confidence                  01111   111 11  1222 2      33  678999999999999999983     2589999987655543

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.29  E-value=1.6e-11  Score=98.03  Aligned_cols=140  Identities=16%  Similarity=0.147  Sum_probs=97.7

Q ss_pred             ccCC-CCEEEEeccccccCCCCCCCCCCCCCCCC-CChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCC
Q 028478            2 AAHG-CKNLVFSSSATVYGWPKVVPCTEEFPLEA-MNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIG   79 (208)
Q Consensus         2 ~~~~-vk~~i~~SS~~vyg~~~~~~~~E~~~~~p-~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~   79 (208)
                      ++.| +++||+ |   +||..    .+|..+..| .+.| .+|..+|++++..     +++++++||+.+++...+.   
T Consensus       100 ~~~g~v~~~v~-S---~~g~~----~~~~~~~~p~~~~y-~sK~~~e~~~~~~-----~i~~~~lrp~~~~~~~~~~---  162 (307)
T 2gas_A          100 KEAGNVKKFFP-S---EFGLD----VDRHDAVEPVRQVF-EEKASIRRVIEAE-----GVPYTYLCCHAFTGYFLRN---  162 (307)
T ss_dssp             HHHCCCSEEEC-S---CCSSC----TTSCCCCTTHHHHH-HHHHHHHHHHHHH-----TCCBEEEECCEETTTTGGG---
T ss_pred             HhcCCceEEee-c---ccccC----cccccCCCcchhHH-HHHHHHHHHHHHc-----CCCeEEEEcceeecccccc---
Confidence            4567 999883 3   35521    223334444 4578 9999999988754     8999999999988852110   


Q ss_pred             CCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecC-CCCcC
Q 028478           80 EDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGT-GKGTS  158 (208)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~-~~~~s  158 (208)
                               +.........++  .+.+++      +++..+++++++|+|+++..++..+.   ..++.|++.+ ++.+|
T Consensus       163 ---------~~~~~~~~~~~~--~~~~~~------~~~~~~~~i~~~Dva~~~~~~l~~~~---~~~~~~~~~~~~~~~s  222 (307)
T 2gas_A          163 ---------LAQLDATDPPRD--KVVILG------DGNVKGAYVTEADVGTFTIRAANDPN---TLNKAVHIRLPKNYLT  222 (307)
T ss_dssp             ---------TTCTTCSSCCSS--EEEEET------TSCSEEEEECHHHHHHHHHHHHTCGG---GTTEEEECCCGGGEEE
T ss_pred             ---------ccccccccCCCC--eEEEec------CCCcceEEeeHHHHHHHHHHHHcCcc---ccCceEEEeCCCCcCC
Confidence                     000000011222  567777      78889999999999999999998742   3357777765 46799


Q ss_pred             HHHHHHHHHHHhCCCceEEE
Q 028478          159 VLEMVAAFEKASGKVHIFAL  178 (208)
Q Consensus       159 ~~e~~~~i~~~~g~~~~~~~  178 (208)
                      +.|+++.+.+.+|.+.++..
T Consensus       223 ~~e~~~~~~~~~g~~~~~~~  242 (307)
T 2gas_A          223 QNEVIALWEKKIGKTLEKTY  242 (307)
T ss_dssp             HHHHHHHHHHHHTSCCEEEE
T ss_pred             HHHHHHHHHHHhCCCCceee
Confidence            99999999999999877653

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.28  E-value=4.4e-12  Score=98.18  Aligned_cols=128  Identities=20%  Similarity=0.199  Sum_probs=89.0

Q ss_pred             ccCCCCEEEEeccccccCCCCCCCCCCCCCCCC--CChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEA--MNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIG   79 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p--~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~   79 (208)
                      ++.++++||++||..++..        ..+..+  .+.|+.+|..+|.+++.    . +++++++||+.+||+...    
T Consensus       121 ~~~~~~~iv~~SS~~~~~~--------~~~~~~~~~~~y~~sK~~~e~~~~~----~-~i~~~~vrpg~v~~~~~~----  183 (253)
T 1xq6_A          121 KVAGVKHIVVVGSMGGTNP--------DHPLNKLGNGNILVWKRKAEQYLAD----S-GTPYTIIRAGGLLDKEGG----  183 (253)
T ss_dssp             HHHTCSEEEEEEETTTTCT--------TCGGGGGGGCCHHHHHHHHHHHHHT----S-SSCEEEEEECEEECSCSS----
T ss_pred             HHcCCCEEEEEcCccCCCC--------CCccccccchhHHHHHHHHHHHHHh----C-CCceEEEecceeecCCcc----
Confidence            4567899999999877631        111111  24588899999998874    3 899999999999997411    


Q ss_pred             CCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC---C
Q 028478           80 EDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK---G  156 (208)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~---~  156 (208)
                        ..   . ++       .+....  +++       +  .+++++++|+|++++.+++++.   ..+++||+++++   .
T Consensus       184 --~~---~-~~-------~~~~~~--~~~-------~--~~~~~~~~Dva~~~~~~~~~~~---~~g~~~~i~~~~~~~~  236 (253)
T 1xq6_A          184 --VR---E-LL-------VGKDDE--LLQ-------T--DTKTVPRADVAEVCIQALLFEE---AKNKAFDLGSKPEGTS  236 (253)
T ss_dssp             --SS---C-EE-------EESTTG--GGG-------S--SCCEEEHHHHHHHHHHHTTCGG---GTTEEEEEEECCTTTS
T ss_pred             --hh---h-hh-------ccCCcC--CcC-------C--CCcEEcHHHHHHHHHHHHcCcc---ccCCEEEecCCCcCCC
Confidence              00   0 00       011001  111       1  2468999999999999998742   346899999864   5


Q ss_pred             cCHHHHHHHHHHHhCCC
Q 028478          157 TSVLEMVAAFEKASGKV  173 (208)
Q Consensus       157 ~s~~e~~~~i~~~~g~~  173 (208)
                      +|+.|+++.+.+.+|++
T Consensus       237 ~s~~e~~~~~~~~~g~~  253 (253)
T 1xq6_A          237 TPTKDFKALFSQVTSRF  253 (253)
T ss_dssp             CCCCCHHHHHHTCCCCC
T ss_pred             CCHHHHHHHHHHHhCCC
Confidence            99999999999988863

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.27  E-value=7.3e-12  Score=100.02  Aligned_cols=140  Identities=16%  Similarity=0.108  Sum_probs=98.4

Q ss_pred             ccCC-CCEEEEeccccccCCCCCCCCCCCCCCCC-CChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCC
Q 028478            2 AAHG-CKNLVFSSSATVYGWPKVVPCTEEFPLEA-MNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIG   79 (208)
Q Consensus         2 ~~~~-vk~~i~~SS~~vyg~~~~~~~~E~~~~~p-~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~   79 (208)
                      +++| +++||+ |   +||..    .+|..+..| .+.| .+|..+|+.++..     +++++++||+.++|...+..  
T Consensus       101 ~~~g~v~~~v~-S---~~g~~----~~~~~~~~p~~~~y-~sK~~~e~~~~~~-----~~~~~~~r~~~~~~~~~~~~--  164 (308)
T 1qyc_A          101 KEVGTVKRFFP-S---EFGND----VDNVHAVEPAKSVF-EVKAKVRRAIEAE-----GIPYTYVSSNCFAGYFLRSL--  164 (308)
T ss_dssp             HHHCCCSEEEC-S---CCSSC----TTSCCCCTTHHHHH-HHHHHHHHHHHHH-----TCCBEEEECCEEHHHHTTTT--
T ss_pred             HhcCCCceEee-c---ccccC----ccccccCCcchhHH-HHHHHHHHHHHhc-----CCCeEEEEeceecccccccc--
Confidence            4567 999884 4   35521    233344444 3568 9999999998764     79999999999988421100  


Q ss_pred             CCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecC-CCCcC
Q 028478           80 EDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGT-GKGTS  158 (208)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~-~~~~s  158 (208)
                                .........++  .+.+++      ++++.++|++++|+|+++..+++++   ...++.|++.+ ++.+|
T Consensus       165 ----------~~~~~~~~~~~--~~~~~~------~~~~~~~~i~~~Dva~~~~~~l~~~---~~~~~~~~~~g~~~~~s  223 (308)
T 1qyc_A          165 ----------AQAGLTAPPRD--KVVILG------DGNARVVFVKEEDIGTFTIKAVDDP---RTLNKTLYLRLPANTLS  223 (308)
T ss_dssp             ----------TCTTCSSCCSS--EEEEET------TSCCEEEEECHHHHHHHHHTTSSCG---GGTTEEEECCCGGGEEE
T ss_pred             ----------ccccccCCCCC--ceEEec------CCCceEEEecHHHHHHHHHHHHhCc---cccCeEEEEeCCCCccC
Confidence                      00000011222  677778      7889999999999999999999874   23357888865 46899


Q ss_pred             HHHHHHHHHHHhCCCceEEE
Q 028478          159 VLEMVAAFEKASGKVHIFAL  178 (208)
Q Consensus       159 ~~e~~~~i~~~~g~~~~~~~  178 (208)
                      +.|+++.+.+.+|.+.++..
T Consensus       224 ~~e~~~~~~~~~g~~~~~~~  243 (308)
T 1qyc_A          224 LNELVALWEKKIDKTLEKAY  243 (308)
T ss_dssp             HHHHHHHHHHHTTSCCEEEE
T ss_pred             HHHHHHHHHHHhCCCCceEe
Confidence            99999999999999877653

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.09  E-value=4e-10  Score=84.43  Aligned_cols=107  Identities=17%  Similarity=0.161  Sum_probs=74.9

Q ss_pred             ccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      ++.++++||++||..+|+.....+       .+.+.|+.+|..+|++++.    . +++++++||+.+ ++..      .
T Consensus        99 ~~~~~~~~v~~Ss~~~~~~~~~~~-------~~~~~y~~~K~~~e~~~~~----~-~i~~~~lrp~~~-~~~~------~  159 (206)
T 1hdo_A           99 KAHGVDKVVACTSAFLLWDPTKVP-------PRLQAVTDDHIRMHKVLRE----S-GLKYVAVMPPHI-GDQP------L  159 (206)
T ss_dssp             HHHTCCEEEEECCGGGTSCTTCSC-------GGGHHHHHHHHHHHHHHHH----T-CSEEEEECCSEE-ECCC------C
T ss_pred             HHhCCCeEEEEeeeeeccCccccc-------ccchhHHHHHHHHHHHHHh----C-CCCEEEEeCCcc-cCCC------C
Confidence            456889999999999997533211       1567899999999999864    3 899999999997 4311      0


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                      ...    +              ....+    . .+.  .++++++|+|++++.+++++   ...+++|++++++
T Consensus       160 ~~~----~--------------~~~~~----~-~~~--~~~i~~~Dva~~~~~~~~~~---~~~g~~~~i~~g~  205 (206)
T 1hdo_A          160 TGA----Y--------------TVTLD----G-RGP--SRVISKHDLGHFMLRCLTTD---EYDGHSTYPSHQY  205 (206)
T ss_dssp             CSC----C--------------EEESS----S-CSS--CSEEEHHHHHHHHHHTTSCS---TTTTCEEEEECCC
T ss_pred             Ccc----e--------------Eeccc----C-CCC--CCccCHHHHHHHHHHHhcCc---cccccceeeeccc
Confidence            000    0              00001    0 111  58999999999999999884   2456899999775

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.08  E-value=4.9e-10  Score=88.15  Aligned_cols=132  Identities=10%  Similarity=0.016  Sum_probs=92.4

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhc---CCCccEEEEecccccCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRS---DSEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      .+..+||++||...+....          .+...|+.+|.+.|.+++.++.+   + +++++++||+.++++......  
T Consensus       143 ~~~~~iv~isS~~~~~~~~----------~~~~~Y~~sK~a~~~~~~~la~e~~~~-gi~v~~v~Pg~v~t~~~~~~~--  209 (278)
T 2bgk_A          143 AKKGSIVFTASISSFTAGE----------GVSHVYTATKHAVLGLTTSLCTELGEY-GIRVNCVSPYIVASPLLTDVF--  209 (278)
T ss_dssp             GTCEEEEEECCGGGTCCCT----------TSCHHHHHHHHHHHHHHHHHHHHHGGG-TEEEEEEEESCCSCCCCTTSS--
T ss_pred             cCCCeEEEEeeccccCCCC----------CCCcchHHHHHHHHHHHHHHHHHHhhc-CcEEEEEEeceecchhhhhhc--
Confidence            4567999999998885321          13568999999999999988764   4 899999999999997422110  


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHH
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVL  160 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~  160 (208)
                            ..............               +...+.+++++|+|++++.++.... ....|+.|++.++..+++.
T Consensus       210 ------~~~~~~~~~~~~~~---------------~~~~~~~~~~~dva~~~~~l~~~~~-~~~~G~~~~v~gg~~~~~~  267 (278)
T 2bgk_A          210 ------GVDSSRVEELAHQA---------------ANLKGTLLRAEDVADAVAYLAGDES-KYVSGLNLVIDGGYTRTNP  267 (278)
T ss_dssp             ------SCCHHHHHHHHHHT---------------CSSCSCCCCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTGGGCCT
T ss_pred             ------ccchhHHHHhhhcc---------------cccccccCCHHHHHHHHHHHcCccc-ccCCCCEEEECCcccccCC
Confidence                  00111222222211               1112357899999999999997632 2355799999999999999


Q ss_pred             HHHHHHHHHh
Q 028478          161 EMVAAFEKAS  170 (208)
Q Consensus       161 e~~~~i~~~~  170 (208)
                      |+++.+.+.+
T Consensus       268 e~~~~i~~~~  277 (278)
T 2bgk_A          268 AFPTALKHGL  277 (278)
T ss_dssp             HHHHHSCSCC
T ss_pred             ccchhhhhhc
Confidence            9999876543

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=98.97  E-value=7e-10  Score=85.91  Aligned_cols=130  Identities=11%  Similarity=-0.039  Sum_probs=85.1

Q ss_pred             cCCCCEEEEeccccccCCCCCC-CC-------CCCC-------CCCCCChHHHhHHHHHHHHHHHhhc---CCCccEEEE
Q 028478            3 AHGCKNLVFSSSATVYGWPKVV-PC-------TEEF-------PLEAMNPYGRTKLFIEEICRDVHRS---DSEWKIILL   64 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~-~~-------~E~~-------~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~ii   64 (208)
                      +.+.+++|++||..+|+..... +.       +|+.       ...+.+.|+.+|.+.|.+++.++.+   . +++++++
T Consensus       103 ~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~-gi~v~~v  181 (255)
T 2dkn_A          103 RGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGR-GVRLNVV  181 (255)
T ss_dssp             TSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHT-TCEEEEE
T ss_pred             hcCCceEEEEeccccccccccccchhhhhcccchhhhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhc-CcEEEEE
Confidence            3466899999999998643111 11       1111       1134568999999999999988765   5 8999999


Q ss_pred             ecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCC--eeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCC
Q 028478           65 RYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRP--ELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDP  142 (208)
Q Consensus        65 R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~  142 (208)
                      ||+.++|+.                   ..........  ....+       .+ ..+.+++++|+|++++.++..+. .
T Consensus       182 ~pg~v~~~~-------------------~~~~~~~~~~~~~~~~~-------~~-~~~~~~~~~dva~~~~~l~~~~~-~  233 (255)
T 2dkn_A          182 APGAVETPL-------------------LQASKADPRYGESTRRF-------VA-PLGRGSEPREVAEAIAFLLGPQA-S  233 (255)
T ss_dssp             EECCBCSHH-------------------HHHHHHCTTTHHHHHSC-------CC-TTSSCBCHHHHHHHHHHHHSGGG-T
T ss_pred             cCCcccchh-------------------hhhcccchhhHHHHHHH-------HH-HhcCCCCHHHHHHHHHHHhCCCc-c
Confidence            999999962                   1111010000  00000       01 34578999999999999998732 1


Q ss_pred             CCCCceEEecCCCCcCHHH
Q 028478          143 KIGCEVYNLGTGKGTSVLE  161 (208)
Q Consensus       143 ~~~~~~~ni~~~~~~s~~e  161 (208)
                      ...++.|+++++..++++|
T Consensus       234 ~~~G~~~~v~gg~~~~~~e  252 (255)
T 2dkn_A          234 FIHGSVLFVDGGMDALMRA  252 (255)
T ss_dssp             TCCSCEEEESTTHHHHHCT
T ss_pred             cceeeEEEecCCeEeeeec
Confidence            2456899999887666544

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=98.95  E-value=1.8e-09  Score=85.24  Aligned_cols=138  Identities=13%  Similarity=-0.033  Sum_probs=88.7

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhc---CCCccEEEEecccccCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRS---DSEWKIILLRYFNPVGAHPSGKIG   79 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~iiR~~~i~G~~~~~~~~   79 (208)
                      +.+..+||++||...+..           ..+.+.|+.+|.+.|.+.+.++.+   + ++.+++++||.+.++.......
T Consensus       127 ~~~~~~iv~~sS~~~~~~-----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~-gi~v~~v~Pg~v~t~~~~~~~~  194 (281)
T 3m1a_A          127 ERGSGSVVNISSFGGQLS-----------FAGFSAYSATKAALEQLSEGLADEVAPF-GIKVLIVEPGAFRTNLFGKGAA  194 (281)
T ss_dssp             HHTCEEEEEECCGGGTCC-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGG-TEEEEEEEECCBCCTTTCCCCE
T ss_pred             hcCCCEEEEEcCccccCC-----------CCCchHHHHHHHHHHHHHHHHHHHhhcc-CcEEEEEecCcccccccccccc
Confidence            446679999999776632           234678999999999999998776   5 8999999999998864221100


Q ss_pred             CCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCH
Q 028478           80 EDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSV  159 (208)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~  159 (208)
                      .. ......+.....   ...  ++.         .....+.+.+++|+|++++.+++.+    ..+..|+++++....+
T Consensus       195 ~~-~~~~~~~~~~~~---~~~--~~~---------~~~~~~~~~~~~dva~a~~~~~~~~----~~~~~~~l~s~~~~~i  255 (281)
T 3m1a_A          195 YF-SEENPAYAEKVG---PTR--QLV---------QGSDGSQPGDPAKAAAAIRLALDTE----KTPLRLALGGDAVDFL  255 (281)
T ss_dssp             EE-CCBCTTTHHHHH---HHH--HHH---------HC-----CBCHHHHHHHHHHHHHSS----SCCSEEEESHHHHHHH
T ss_pred             cc-CCcchhhHHHhH---HHH--HHH---------hhccCCCCCCHHHHHHHHHHHHhCC----CCCeEEecCchHHHHH
Confidence            00 000111111111   110  000         1122345788999999999999983    4457899998877777


Q ss_pred             HHHHHHHHHHhC
Q 028478          160 LEMVAAFEKASG  171 (208)
Q Consensus       160 ~e~~~~i~~~~g  171 (208)
                      .+....+.+.++
T Consensus       256 ~g~~~~i~~~~~  267 (281)
T 3m1a_A          256 TGHLDSVRAELT  267 (281)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            777777766554

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=98.92  E-value=4.5e-09  Score=80.89  Aligned_cols=107  Identities=12%  Similarity=0.087  Sum_probs=72.5

Q ss_pred             ccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCc-cEEEEecccccCCCCCCCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEW-KIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~-~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      ++.++++||++||..+|+.             +.+.|+.+|...|.+++.+     ++ +++++||+.++|+...     
T Consensus       120 ~~~~~~~iv~~SS~~~~~~-------------~~~~Y~~sK~~~e~~~~~~-----~~~~~~~vrpg~v~~~~~~-----  176 (242)
T 2bka_A          120 KAGGCKHFNLLSSKGADKS-------------SNFLYLQVKGEVEAKVEEL-----KFDRYSVFRPGVLLCDRQE-----  176 (242)
T ss_dssp             HHTTCCEEEEECCTTCCTT-------------CSSHHHHHHHHHHHHHHTT-----CCSEEEEEECCEEECTTGG-----
T ss_pred             HHCCCCEEEEEccCcCCCC-------------CcchHHHHHHHHHHHHHhc-----CCCCeEEEcCceecCCCCC-----
Confidence            4568889999999988852             2468999999999998764     67 5999999999997311     


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecC
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGT  153 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~  153 (208)
                            ......+.....+.. +. .++          ...+++++|+|++++.++.++    ..++.+++.+
T Consensus       177 ------~~~~~~~~~~~~~~~-~~-~~~----------~~~~~~~~dva~~~~~~~~~~----~~~~~~~~~~  227 (242)
T 2bka_A          177 ------SRPGEWLVRKFFGSL-PD-SWA----------SGHSVPVVTVVRAMLNNVVRP----RDKQMELLEN  227 (242)
T ss_dssp             ------GSHHHHHHHHHHCSC-CT-TGG----------GGTEEEHHHHHHHHHHHHTSC----CCSSEEEEEH
T ss_pred             ------CcHHHHHHHHhhccc-Cc-ccc----------CCcccCHHHHHHHHHHHHhCc----cccCeeEeeH
Confidence                  112232222222221 11 111          124899999999999999883    3335666543

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=98.67  E-value=1.1e-08  Score=76.76  Aligned_cols=87  Identities=13%  Similarity=0.101  Sum_probs=66.5

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhc---CCCccEEEEecccccCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRS---DSEWKIILLRYFNPVGAHPSGKIG   79 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~iiR~~~i~G~~~~~~~~   79 (208)
                      +.+..+||++||...|..           ..+...|+.+|.+.|.+++.++.+   + +++++++||+.++++.      
T Consensus       110 ~~~~~~iv~~sS~~~~~~-----------~~~~~~Y~~sK~a~~~~~~~~~~~~~~~-gi~v~~v~pg~v~t~~------  171 (207)
T 2yut_A          110 FQKGARAVFFGAYPRYVQ-----------VPGFAAYAAAKGALEAYLEAARKELLRE-GVHLVLVRLPAVATGL------  171 (207)
T ss_dssp             EEEEEEEEEECCCHHHHS-----------STTBHHHHHHHHHHHHHHHHHHHHHHTT-TCEEEEECCCCBCSGG------
T ss_pred             hcCCcEEEEEcChhhccC-----------CCCcchHHHHHHHHHHHHHHHHHHHhhh-CCEEEEEecCcccCCC------
Confidence            345679999999888742           234578999999999999988766   4 8999999999999861      


Q ss_pred             CCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhc
Q 028478           80 EDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKL  139 (208)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  139 (208)
                                   .    .+               .+...+.+++++|+|++++.+++++
T Consensus       172 -------------~----~~---------------~~~~~~~~~~~~dva~~~~~~~~~~  199 (207)
T 2yut_A          172 -------------W----AP---------------LGGPPKGALSPEEAARKVLEGLFRE  199 (207)
T ss_dssp             -------------G----GG---------------GTSCCTTCBCHHHHHHHHHHHHC--
T ss_pred             -------------c----cc---------------cCCCCCCCCCHHHHHHHHHHHHhCC
Confidence                         0    01               1223457899999999999999883

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=98.67  E-value=7.7e-09  Score=80.17  Aligned_cols=117  Identities=9%  Similarity=0.062  Sum_probs=81.5

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      +.+..+||++||...+..           ..+...|+.+|.+.|.+++.++.++  .++.++++||+.++++....    
T Consensus       135 ~~~~~~iv~~sS~~~~~~-----------~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~----  199 (255)
T 1fmc_A          135 KNGGGVILTITSMAAENK-----------NINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKS----  199 (255)
T ss_dssp             HHTCEEEEEECCGGGTCC-----------CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT----
T ss_pred             hcCCcEEEEEcchhhcCC-----------CCCCcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhh----
Confidence            346779999999887742           1245789999999999999887653  27999999999999863110    


Q ss_pred             CCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCH
Q 028478           81 DPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSV  159 (208)
Q Consensus        81 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~  159 (208)
                             .+.+ +......+.  +               ...+++++|+|++++.++.... ....+++|++.+|..+|+
T Consensus       200 -------~~~~~~~~~~~~~~--~---------------~~~~~~~~dva~~~~~l~~~~~-~~~~G~~~~v~gg~~~s~  254 (255)
T 1fmc_A          200 -------VITPEIEQKMLQHT--P---------------IRRLGQPQDIANAALFLCSPAA-SWVSGQILTVSGGGVQEL  254 (255)
T ss_dssp             -------TCCHHHHHHHHHTC--S---------------SCSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTSCCCC
T ss_pred             -------ccChHHHHHHHhcC--C---------------cccCCCHHHHHHHHHHHhCCcc-ccCCCcEEEECCceeccC
Confidence                   0111 233333322  1               1247899999999999997632 124568999999887764

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=98.65  E-value=1.5e-07  Score=72.18  Aligned_cols=110  Identities=12%  Similarity=-0.004  Sum_probs=65.5

Q ss_pred             ccCCCCEEEEeccccccCCCCCC--CCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWPKVV--PCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIG   79 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~~~--~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~   79 (208)
                      ++.++++||++||..+|+.....  +..+.....+.    ..+..+|..++    .. +++++++||+.++++...    
T Consensus       113 ~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~----~~-gi~~~~vrPg~i~~~~~~----  179 (236)
T 3qvo_A          113 KACDVKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPL----KPFRRAADAIE----AS-GLEYTILRPAWLTDEDII----  179 (236)
T ss_dssp             HHTTCCEEEEECCCCC----------------CGGG----HHHHHHHHHHH----TS-CSEEEEEEECEEECCSCC----
T ss_pred             HHcCCCEEEEEecceecCCCCcccccchhhcccchH----HHHHHHHHHHH----HC-CCCEEEEeCCcccCCCCc----
Confidence            56789999999999999854332  23333332333    33445555554    33 899999999999986210    


Q ss_pred             CCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcc-eeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           80 EDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTG-VRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                          .                   .....      .+.. ...+++.+|+|++++.++..+.  ...++.|+++++.
T Consensus       180 ----~-------------------~~~~~------~~~~~~~~~i~~~DvA~~i~~ll~~~~--~~~g~~~~i~~~~  225 (236)
T 3qvo_A          180 ----D-------------------YELTS------RNEPFKGTIVSRKSVAALITDIIDKPE--KHIGENIGINQPG  225 (236)
T ss_dssp             ----C-------------------CEEEC------TTSCCSCSEEEHHHHHHHHHHHHHSTT--TTTTEEEEEECSS
T ss_pred             ----c-------------------eEEec------cCCCCCCcEECHHHHHHHHHHHHcCcc--cccCeeEEecCCC
Confidence                0                   01111      1111 2358999999999999999843  2457999998765

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=98.65  E-value=4.1e-09  Score=83.93  Aligned_cols=131  Identities=9%  Similarity=-0.011  Sum_probs=87.9

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhc---CCCccEEEEecccccCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRS---DSEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      .+..++|++||...+..           ..+...|+.+|.+.|.+++.++.+   + ++.++++|||.++++.....   
T Consensus       154 ~~~~~iv~isS~~~~~~-----------~~~~~~Y~~sK~a~~~~~~~la~~~~~~-gi~v~~v~Pg~v~t~~~~~~---  218 (302)
T 1w6u_A          154 QKGAAFLSITTIYAETG-----------SGFVVPSASAKAGVEAMSKSLAAEWGKY-GMRFNVIQPGPIKTKGAFSR---  218 (302)
T ss_dssp             TCCEEEEEECCTHHHHC-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGG-TEEEEEEEECCBCC---------
T ss_pred             cCCCEEEEEcccccccC-----------CCCcchhHHHHHHHHHHHHHHHHHhhhc-CcEEEEEeeccCCCcchhhh---
Confidence            34569999999876632           124568999999999999998776   5 89999999999998621110   


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHH
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVL  160 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~  160 (208)
                         ......  .........  +               ...+.+++|+|++++.++.... ....|+.|++.+|..+++.
T Consensus       219 ---~~~~~~--~~~~~~~~~--p---------------~~~~~~~~dva~~~~~l~~~~~-~~~~G~~~~v~gg~~~~~~  275 (302)
T 1w6u_A          219 ---LDPTGT--FEKEMIGRI--P---------------CGRLGTVEELANLAAFLCSDYA-SWINGAVIKFDGGEEVLIS  275 (302)
T ss_dssp             ---CCTTSH--HHHHHHTTC--T---------------TSSCBCHHHHHHHHHHHTSGGG-TTCCSCEEEESTTHHHHHH
T ss_pred             ---cccchh--hHHHHHhcC--C---------------cCCCCCHHHHHHHHHHHcCCcc-cccCCCEEEECCCeeeccC
Confidence               000111  111222211  1               1247889999999999987632 2245789999998888888


Q ss_pred             HHHHHHHHHhCC
Q 028478          161 EMVAAFEKASGK  172 (208)
Q Consensus       161 e~~~~i~~~~g~  172 (208)
                      ++++.+.+..|.
T Consensus       276 ~~~~~~~~~~g~  287 (302)
T 1w6u_A          276 GEFNDLRKVTKE  287 (302)
T ss_dssp             STTGGGGGCCHH
T ss_pred             Cccccchhhccc
Confidence            888777665543

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=98.60  E-value=2.4e-08  Score=76.94  Aligned_cols=113  Identities=11%  Similarity=-0.010  Sum_probs=77.2

Q ss_pred             CCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCC
Q 028478            6 CKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPR   83 (208)
Q Consensus         6 vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~   83 (208)
                      ..+||++||...+...           .+...|+.+|.+.|.+++.++.+.  .++.+.++||+.++++....      .
T Consensus       128 ~~~iv~~sS~~~~~~~-----------~~~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~------~  190 (244)
T 1cyd_A          128 PGSIVNVSSMVAHVTF-----------PNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKK------V  190 (244)
T ss_dssp             CEEEEEECCGGGTSCC-----------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHH------H
T ss_pred             CeEEEEEcchhhcCCC-----------CCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccc------c
Confidence            5689999998887531           234689999999999999887652  17999999999999962100      0


Q ss_pred             CCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           84 GIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                      .   ....++.....+                 ...+++++++|+|++++.++..+.. ...++.+++.++..
T Consensus       191 ~---~~~~~~~~~~~~-----------------~~~~~~~~~~dva~~~~~l~~~~~~-~~~G~~~~v~gG~~  242 (244)
T 1cyd_A          191 S---ADPEFARKLKER-----------------HPLRKFAEVEDVVNSILFLLSDRSA-STSGGGILVDAGYL  242 (244)
T ss_dssp             T---CCHHHHHHHHHH-----------------STTSSCBCHHHHHHHHHHHHSGGGT-TCCSSEEEESTTGG
T ss_pred             c---cCHHHHHHHHhc-----------------CCccCCCCHHHHHHHHHHHhCchhh-cccCCEEEECCCcc
Confidence            0   000122222222                 1235789999999999999986322 24568888887653

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=98.60  E-value=1.9e-08  Score=79.12  Aligned_cols=133  Identities=11%  Similarity=-0.031  Sum_probs=76.1

Q ss_pred             CEEEEeccccc-cCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhc---CCCccEEEEecccccCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATV-YGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRS---DSEWKIILLRYFNPVGAHPSGKIGEDP   82 (208)
Q Consensus         7 k~~i~~SS~~v-yg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~iiR~~~i~G~~~~~~~~~~~   82 (208)
                      .++|++||... +..           ..+...|+.+|.+.+.+.+.++.+   + ++.+++++||.+.++...... . .
T Consensus       141 g~iv~isS~~~~~~~-----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~-gi~v~~v~Pg~v~t~~~~~~~-~-~  206 (278)
T 1spx_A          141 GEIVNISSIASGLHA-----------TPDFPYYSIAKAAIDQYTRNTAIDLIQH-GIRVNSISPGLVATGFGSAMG-M-P  206 (278)
T ss_dssp             CEEEEECCTTSSSSC-----------CTTSHHHHHHHHHHHHHHHHHHHHHGGG-TCEEEEEEECCBCCCC---------
T ss_pred             CeEEEEecccccccC-----------CCCccHHHHHHHHHHHHHHHHHHHHHhc-CcEEEEEecCcccCccccccc-c-C
Confidence            69999999876 532           123467999999999999887654   4 899999999999987421100 0 0


Q ss_pred             CCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHHHH
Q 028478           83 RGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEM  162 (208)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~  162 (208)
                      ......+...........               +  ...+.+.+|+|++++.++..+......|+.+++.+|..+++.|+
T Consensus       207 ~~~~~~~~~~~~~~~~~~---------------p--~~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~~  269 (278)
T 1spx_A          207 EETSKKFYSTMATMKECV---------------P--AGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSLIMGLH  269 (278)
T ss_dssp             -------HHHHHHHHHHC---------------T--TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC----
T ss_pred             chhhhhhhHHHHHHHhcC---------------C--CcCCCCHHHHHHHHHHHcCccccCcccCcEEEECCCcccccCcc
Confidence            000000111122221111               0  12378999999999999876321114568999999999999999


Q ss_pred             HHHHHHHh
Q 028478          163 VAAFEKAS  170 (208)
Q Consensus       163 ~~~i~~~~  170 (208)
                      ++++.+.+
T Consensus       270 ~~~~~~~~  277 (278)
T 1spx_A          270 CQDFAKLL  277 (278)
T ss_dssp             --------
T ss_pred             cccHHHHh
Confidence            99988754

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=98.58  E-value=6.2e-08  Score=74.63  Aligned_cols=113  Identities=8%  Similarity=-0.047  Sum_probs=76.4

Q ss_pred             CCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCC
Q 028478            6 CKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPR   83 (208)
Q Consensus         6 vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~   83 (208)
                      ..++|++||...+..           ..+.+.|+.+|.+.|.+++.++.+.  .++.+.++||+.++++......  .  
T Consensus       128 ~~~iv~~sS~~~~~~-----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~--~--  192 (244)
T 3d3w_A          128 PGAIVNVSSQCSQRA-----------VTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATW--S--  192 (244)
T ss_dssp             CEEEEEECCGGGTSC-----------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHS--C--
T ss_pred             CcEEEEeCchhhccC-----------CCCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhc--c--
Confidence            568999999877642           1235689999999999999887652  1799999999999996311000  0  


Q ss_pred             CCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           84 GIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                        ...   .........                 ..+.+++++|+|++++.++.... ....++.|++.+|..
T Consensus       193 --~~~---~~~~~~~~~-----------------~~~~~~~~~dva~~~~~l~~~~~-~~~~G~~~~v~gG~~  242 (244)
T 3d3w_A          193 --DPH---KAKTMLNRI-----------------PLGKFAEVEHVVNAILFLLSDRS-GMTTGSTLPVEGGFW  242 (244)
T ss_dssp             --STT---HHHHHHHTC-----------------TTCSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTGG
T ss_pred             --ChH---HHHHHHhhC-----------------CCCCCcCHHHHHHHHHHHcCccc-cCCCCCEEEECCCcc
Confidence              001   112222211                 12458899999999999997632 124578999987753

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=98.56  E-value=3.6e-07  Score=68.21  Aligned_cols=93  Identities=4%  Similarity=-0.112  Sum_probs=69.2

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC-CCccEEEEecccccCCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD-SEWKIILLRYFNPVGAHPSGKIGEDPRGI   85 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~iiR~~~i~G~~~~~~~~~~~~~~   85 (208)
                      .++|++||...+..           ..+...|+.+|.+.|.+++.++.+. .+++++++||+.++++.            
T Consensus       108 ~~iv~~sS~~~~~~-----------~~~~~~Y~~sK~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~------------  164 (202)
T 3d7l_A          108 GSFTLTTGIMMEDP-----------IVQGASAAMANGAVTAFAKSAAIEMPRGIRINTVSPNVLEESW------------  164 (202)
T ss_dssp             EEEEEECCGGGTSC-----------CTTCHHHHHHHHHHHHHHHHHTTSCSTTCEEEEEEECCBGGGH------------
T ss_pred             CEEEEEcchhhcCC-----------CCccHHHHHHHHHHHHHHHHHHHHccCCeEEEEEecCccCCch------------
Confidence            58999999766532           2335689999999999999987653 27999999999999961            


Q ss_pred             CCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEe
Q 028478           86 PNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNL  151 (208)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni  151 (208)
                             . ..  +               +....+++++++|+|++++.++..    ...+++||+
T Consensus       165 -------~-~~--~---------------~~~~~~~~~~~~dva~~~~~~~~~----~~~G~~~~v  201 (202)
T 3d7l_A          165 -------D-KL--E---------------PFFEGFLPVPAAKVARAFEKSVFG----AQTGESYQV  201 (202)
T ss_dssp             -------H-HH--G---------------GGSTTCCCBCHHHHHHHHHHHHHS----CCCSCEEEE
T ss_pred             -------h-hh--h---------------hhccccCCCCHHHHHHHHHHhhhc----cccCceEec
Confidence                   1 11  1               122245789999999999998854    355678886

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=98.50  E-value=4.9e-08  Score=77.06  Aligned_cols=131  Identities=15%  Similarity=0.033  Sum_probs=90.6

Q ss_pred             CCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCC
Q 028478            6 CKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPR   83 (208)
Q Consensus         6 vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~   83 (208)
                      -.+||++||...+...           .+...|+.+|.+.+.+.+.++.++  .++.+.+++||.+.++.....      
T Consensus       143 ~g~iv~isS~~~~~~~-----------~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~------  205 (281)
T 3svt_A          143 GGSFVGISSIAASNTH-----------RWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAI------  205 (281)
T ss_dssp             CEEEEEECCHHHHSCC-----------TTCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH------
T ss_pred             CcEEEEEeCHHHcCCC-----------CCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhc------
Confidence            3489999998877421           235789999999999999887654  269999999999998631000      


Q ss_pred             CCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcC-HHHH
Q 028478           84 GIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTS-VLEM  162 (208)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s-~~e~  162 (208)
                        . .............  +               ...+.+++|+|++++.++.... ....|+.+++.+|..++ ..++
T Consensus       206 --~-~~~~~~~~~~~~~--p---------------~~r~~~~~dva~~~~~l~s~~~-~~itG~~~~vdgG~~~~~~~~~  264 (281)
T 3svt_A          206 --T-ESAELSSDYAMCT--P---------------LPRQGEVEDVANMAMFLLSDAA-SFVTGQVINVDGGQMLRRGPDF  264 (281)
T ss_dssp             --H-TCHHHHHHHHHHC--S---------------SSSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTGGGSCCCCC
T ss_pred             --c-cCHHHHHHHHhcC--C---------------CCCCCCHHHHHHHHHHHhCccc-CCCCCCEEEeCCChhcccCCcc
Confidence              0 0001122222211  1               2246789999999999987632 23567999999888776 7788


Q ss_pred             HHHHHHHhCCCc
Q 028478          163 VAAFEKASGKVH  174 (208)
Q Consensus       163 ~~~i~~~~g~~~  174 (208)
                      ++.+.+.+|.+.
T Consensus       265 ~~~~~~~~~~~~  276 (281)
T 3svt_A          265 SAMLEPVFGRDA  276 (281)
T ss_dssp             HHHHHHHHCTTG
T ss_pred             hhccccccCCcc
Confidence            899998888764

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=98.50  E-value=4.5e-07  Score=68.72  Aligned_cols=113  Identities=10%  Similarity=0.043  Sum_probs=73.1

Q ss_pred             ccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCC-hHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMN-PYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~-~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      ++.++++||++||..+|+..... ..+... .... .|+.+|..+|.+++.    . +++++++||+.++++...     
T Consensus        96 ~~~~~~~iv~iSs~~~~~~~~~~-~~~~~~-~~~~~~y~~~K~~~e~~~~~----~-~i~~~~vrpg~v~~~~~~-----  163 (221)
T 3r6d_A           96 SRXNIRRVIGVSMAGLSGEFPVA-LEKWTF-DNLPISYVQGERQARNVLRE----S-NLNYTILRLTWLYNDPEX-----  163 (221)
T ss_dssp             HHTTCCEEEEEEETTTTSCSCHH-HHHHHH-HTSCHHHHHHHHHHHHHHHH----S-CSEEEEEEECEEECCTTC-----
T ss_pred             HhcCCCeEEEEeeceecCCCCcc-cccccc-cccccHHHHHHHHHHHHHHh----C-CCCEEEEechhhcCCCCC-----
Confidence            46788999999999998742211 000000 1123 799999999998875    3 899999999999986210     


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCc-ceeeeeeHHHHHHHHHHHh--hhcCCCCCCCceEEecCCC
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGT-GVRDYIHVIDLADGHIAAL--HKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~v~D~a~~~~~~~--~~~~~~~~~~~~~ni~~~~  155 (208)
                                        +   .+....      .+. ....+++.+|+|++++.++  ..+.  ...++.+.+.++.
T Consensus       164 ------------------~---~~~~~~------~~~~~~~~~~~~~dvA~~~~~l~~~~~~~--~~~~~~~~i~~~~  212 (221)
T 3r6d_A          164 ------------------T---DYELIP------EGAQFNDAQVSREAVVKAIFDILHAADET--PFHRTSIGVGEPG  212 (221)
T ss_dssp             ------------------C---CCEEEC------TTSCCCCCEEEHHHHHHHHHHHHTCSCCG--GGTTEEEEEECTT
T ss_pred             ------------------c---ceeecc------CCccCCCceeeHHHHHHHHHHHHHhcChh--hhhcceeeecCCC
Confidence                              0   111111      111 1224899999999999999  6632  2345777777543

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=98.49  E-value=9e-08  Score=74.63  Aligned_cols=122  Identities=13%  Similarity=0.029  Sum_probs=78.6

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      .++|++||...+..           ..+...|+.+|.+.+.+.+.++.++  .++.+.+++||.++++...         
T Consensus       135 g~iv~isS~~~~~~-----------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~---------  194 (259)
T 4e6p_A          135 GKIINMASQAGRRG-----------EALVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWD---------  194 (259)
T ss_dssp             EEEEEECCGGGTSC-----------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHH---------
T ss_pred             eEEEEECChhhccC-----------CCCChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhh---------
Confidence            48999999876632           1234689999999999999887653  2799999999999997310         


Q ss_pred             CCCChHHHHHHHHhCCC-CeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcC
Q 028478           85 IPNNLMPFVTQVAVGRR-PELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTS  158 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s  158 (208)
                         .+...+........ .....++      +....+.+.+++|+|++++.++... .....|++|++.+|..+|
T Consensus       195 ---~~~~~~~~~~~~~~~~~~~~~~------~~~p~~r~~~~~dva~~v~~L~s~~-~~~itG~~i~vdgG~~~s  259 (259)
T 4e6p_A          195 ---GVDALFARYENRPRGEKKRLVG------EAVPFGRMGTAEDLTGMAIFLASAE-SDYIVSQTYNVDGGNWMS  259 (259)
T ss_dssp             ---HHHHHHHHHHTCCTTHHHHHHH------HHSTTSSCBCTHHHHHHHHHTTSGG-GTTCCSCEEEESTTSSCC
T ss_pred             ---hhhhhhhhhccCChHHHHHHHh------ccCCCCCCcCHHHHHHHHHHHhCCc-cCCCCCCEEEECcChhcC
Confidence               01111111111000 0111111      2233467899999999999988752 223567999999887654

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=98.48  E-value=1e-07  Score=74.40  Aligned_cols=127  Identities=11%  Similarity=0.014  Sum_probs=78.9

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhc---CCCccEEEEecccccCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRS---DSEWKIILLRYFNPVGAHPSGKIG   79 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~iiR~~~i~G~~~~~~~~   79 (208)
                      +.+..+||++||...+...           .+...|+.+|.+.+.+.+.++.+   + ++.++++|||.++++.......
T Consensus       133 ~~~~g~iv~isS~~~~~~~-----------~~~~~Y~~sK~a~~~~~~~la~e~~~~-gi~v~~v~Pg~v~t~~~~~~~~  200 (263)
T 3ai3_A          133 ARGGGAIIHNASICAVQPL-----------WYEPIYNVTKAALMMFSKTLATEVIKD-NIRVNCINPGLILTPDWIKTAK  200 (263)
T ss_dssp             HHTCEEEEEECCGGGTSCC-----------TTCHHHHHHHHHHHHHHHHHHHHHGGG-TEEEEEEEECCBCCHHHHHHHH
T ss_pred             HcCCcEEEEECchhhcCCC-----------CCcchHHHHHHHHHHHHHHHHHHhhhc-CcEEEEEecCcccCcchhhhhH
Confidence            3466799999998887531           23568999999999999988765   4 8999999999999962100000


Q ss_pred             CCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcC
Q 028478           80 EDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTS  158 (208)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s  158 (208)
                      .....................                ...+.+.+++|+|++++.++..+ .....++.|++.+|...+
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~----------------~p~~~~~~~~dvA~~~~~l~s~~-~~~~~G~~~~vdgG~~~s  262 (263)
T 3ai3_A          201 ELTKDNGGDWKGYLQSVADEH----------------APIKRFASPEELANFFVFLCSER-ATYSVGSAYFVDGGMLKT  262 (263)
T ss_dssp             HHTTTTTCCHHHHHHHHHHHH----------------CTTCSCBCHHHHHHHHHHHTSTT-CTTCCSCEEEESTTCCCC
T ss_pred             hhhcccCCcHHHHHHHHHhcC----------------CCCCCCcCHHHHHHHHHHHcCcc-ccCCCCcEEEECCCcccc
Confidence            000000000000111111100                11235789999999999998763 223457999999887654

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=98.46  E-value=1.9e-07  Score=72.66  Aligned_cols=115  Identities=10%  Similarity=-0.127  Sum_probs=72.9

Q ss_pred             CCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhc---CCCccEEEEecccccCCCCCCCCCCCC
Q 028478            6 CKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRS---DSEWKIILLRYFNPVGAHPSGKIGEDP   82 (208)
Q Consensus         6 vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~iiR~~~i~G~~~~~~~~~~~   82 (208)
                      ..+||++||...+..           ..+...|+.+|.+.|.+.+.++.+   + +++++++||+.++++....      
T Consensus       144 ~g~iv~isS~~~~~~-----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~-gi~v~~v~Pg~v~t~~~~~------  205 (264)
T 2pd6_A          144 RGSIINISSIVGKVG-----------NVGQTNYAASKAGVIGLTQTAARELGRH-GIRCNSVLPGFIATPMTQK------  205 (264)
T ss_dssp             CEEEEEECCTHHHHC-----------CTTBHHHHHHHHHHHHHHHHHHHHHGGG-TEEEEEEEECSBCSCC---------
T ss_pred             CceEEEECChhhccC-----------CCCChhhHHHHHHHHHHHHHHHHHhhhc-CeEEEEEeeecccccchhh------
Confidence            458999999765421           123568999999999999888765   5 8999999999999974210      


Q ss_pred             CCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHHH
Q 028478           83 RGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLE  161 (208)
Q Consensus        83 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e  161 (208)
                            +.. +......                 ......+.+.+|+|++++.++.... ....++.+++.++..++...
T Consensus       206 ------~~~~~~~~~~~-----------------~~~~~~~~~~~dva~~~~~l~~~~~-~~~~G~~~~v~gg~~~~~~~  261 (264)
T 2pd6_A          206 ------VPQKVVDKITE-----------------MIPMGHLGDPEDVADVVAFLASEDS-GYITGTSVEVTGGLFMAENL  261 (264)
T ss_dssp             -------------CTGG-----------------GCTTCSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTC------
T ss_pred             ------cCHHHHHHHHH-----------------hCCCCCCCCHHHHHHHHHHHcCCcc-cCCCCCEEEECCCceecccc
Confidence                  000 1111111                 1112347899999999999987632 23567899999887666554


Q ss_pred             H
Q 028478          162 M  162 (208)
Q Consensus       162 ~  162 (208)
                      +
T Consensus       262 ~  262 (264)
T 2pd6_A          262 Y  262 (264)
T ss_dssp             -
T ss_pred             C
Confidence            3

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=98.42  E-value=4.1e-07  Score=70.90  Aligned_cols=114  Identities=13%  Similarity=0.033  Sum_probs=65.4

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      +.+..+||++||...+..           ..+...|+.+|.+.|.+++.++.++  .+++++++||+.++++.....   
T Consensus       140 ~~~~~~iv~isS~~~~~~-----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---  205 (266)
T 1xq1_A          140 ASGCGNIIFMSSIAGVVS-----------ASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAV---  205 (266)
T ss_dssp             HHSSCEEEEEC---------------------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC----------
T ss_pred             hcCCcEEEEEccchhccC-----------CCCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhh---
Confidence            456789999999876642           1235789999999999998877652  279999999999999742110   


Q ss_pred             CCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           81 DPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        81 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                              ... +......                 ......+++.+|+|++++.++.... ....++.+++.+|..
T Consensus       206 --------~~~~~~~~~~~-----------------~~~~~~~~~~~dva~~~~~l~~~~~-~~~~G~~~~v~gG~~  256 (266)
T 1xq1_A          206 --------YDDEFKKVVIS-----------------RKPLGRFGEPEEVSSLVAFLCMPAA-SYITGQTICVDGGLT  256 (266)
T ss_dssp             -------------------------------------------CCGGGGHHHHHHHTSGGG-TTCCSCEEECCCCEE
T ss_pred             --------cCHHHHHHHHh-----------------cCCCCCCcCHHHHHHHHHHHcCccc-cCccCcEEEEcCCcc
Confidence                    000 1111110                 0111247899999999999987531 234578999987753

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=98.40  E-value=2.1e-07  Score=72.23  Aligned_cols=115  Identities=8%  Similarity=-0.095  Sum_probs=77.3

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhc---CCCccEEEEecccccCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRS---DSEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      .+..++|++||...+...         +..+...|+.+|.+.|.+++.++.+   + +++++++||+.++++....    
T Consensus       140 ~~~~~iv~~sS~~~~~~~---------~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~-gi~v~~v~pg~v~t~~~~~----  205 (260)
T 3awd_A          140 QKQGVIVAIGSMSGLIVN---------RPQQQAAYNASKAGVHQYIRSLAAEWAPH-GIRANAVAPTYIETTLTRF----  205 (260)
T ss_dssp             HTCEEEEEECCGGGTSCC---------SSSCCHHHHHHHHHHHHHHHHHHHHHGGG-TEEEEEEEECCBCCTTTHH----
T ss_pred             cCCCEEEEEecchhcccC---------CCCCccccHHHHHHHHHHHHHHHHHhhhc-CeEEEEEEeeeeccchhhc----
Confidence            356789999997665321         1123478999999999999988776   5 8999999999999973110    


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                        .. .  ...+......+.  +               ...+++.+|+|++++.++.... ....++.|++.++.
T Consensus       206 --~~-~--~~~~~~~~~~~~--~---------------~~~~~~~~dva~~~~~l~~~~~-~~~~G~~~~v~gg~  257 (260)
T 3awd_A          206 --GM-E--KPELYDAWIAGT--P---------------MGRVGQPDEVASVVQFLASDAA-SLMTGAIVNVDAGF  257 (260)
T ss_dssp             --HH-T--CHHHHHHHHHTC--T---------------TSSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTT
T ss_pred             --cc-C--ChHHHHHHHhcC--C---------------cCCCCCHHHHHHHHHHHhCchh-ccCCCcEEEECCce
Confidence              00 0  001222232221  1               1247899999999999987632 23456899998775

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=98.39  E-value=3.2e-07  Score=70.81  Aligned_cols=113  Identities=9%  Similarity=-0.023  Sum_probs=75.4

Q ss_pred             cCCC-CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhh-----cCCCccEEEEecccccCCCCCC
Q 028478            3 AHGC-KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHR-----SDSEWKIILLRYFNPVGAHPSG   76 (208)
Q Consensus         3 ~~~v-k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~-----~~~~~~~~iiR~~~i~G~~~~~   76 (208)
                      +.+. .+||++||...+...           .+...|+.+|.+.|.+.+.++.     .. ++.++++||+.++++....
T Consensus       130 ~~~~~~~iv~isS~~~~~~~-----------~~~~~Y~~sK~a~~~~~~~~a~e~~~~~~-~i~v~~v~Pg~v~t~~~~~  197 (251)
T 1zk4_A          130 NKGLGASIINMSSIEGFVGD-----------PSLGAYNASKGAVRIMSKSAALDCALKDY-DVRVNTVHPGYIKTPLVDD  197 (251)
T ss_dssp             TSSSCEEEEEECCGGGTSCC-----------TTCHHHHHHHHHHHHHHHHHHHHHHHTTC-SEEEEEEEECCBCCHHHHT
T ss_pred             hcCCCCEEEEeCCchhccCC-----------CCCccchHHHHHHHHHHHHHHHHhcccCC-CeEEEEEeeCcCcchhhhh
Confidence            4455 699999998776421           2356899999999999987764     34 8999999999999863110


Q ss_pred             CCCCCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           77 KIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                              ...   ...... ...               ......+++.+|+|++++.++.... ....++.+++.+|.
T Consensus       198 --------~~~---~~~~~~-~~~---------------~~~~~~~~~~~dva~~~~~l~~~~~-~~~~G~~~~v~gG~  248 (251)
T 1zk4_A          198 --------LPG---AEEAMS-QRT---------------KTPMGHIGEPNDIAYICVYLASNES-KFATGSEFVVDGGY  248 (251)
T ss_dssp             --------STT---HHHHHT-STT---------------TCTTSSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTG
T ss_pred             --------cCc---hhhhHH-Hhh---------------cCCCCCCcCHHHHHHHHHHHcCccc-ccccCcEEEECCCc
Confidence                    000   011110 111               1112347899999999999997632 12456899998775

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=98.38  E-value=2.1e-07  Score=72.73  Aligned_cols=120  Identities=13%  Similarity=0.022  Sum_probs=74.8

Q ss_pred             CEEEEecccccc-CCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCC-CCC
Q 028478            7 KNLVFSSSATVY-GWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIG-EDP   82 (208)
Q Consensus         7 k~~i~~SS~~vy-g~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~-~~~   82 (208)
                      .+||++||...+ ...           .+...|+.+|.+.|.+++.++.++  .++.++++||+.++++....... ..+
T Consensus       149 ~~iv~~sS~~~~~~~~-----------~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~  217 (274)
T 1ja9_A          149 GRIILTSSIAAVMTGI-----------PNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAP  217 (274)
T ss_dssp             EEEEEECCGGGTCCSC-----------CSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTST
T ss_pred             CEEEEEcChHhccCCC-----------CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccc
Confidence            589999998876 321           234679999999999999887653  27999999999998852110000 000


Q ss_pred             CCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           83 RGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        83 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                      ......... .......                 +...+.+++++|+|++++.++..+. ....+++|++.+|.
T Consensus       218 ~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~dva~~i~~l~~~~~-~~~~G~~~~v~gG~  273 (274)
T 1ja9_A          218 GGYKGMPQEKIDEGLAN-----------------MNPLKRIGYPADIGRAVSALCQEES-EWINGQVIKLTGGG  273 (274)
T ss_dssp             TCCTTCCHHHHHHHHHH-----------------TSTTSSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTC
T ss_pred             cccccCchHHHHHHHHh-----------------cCCCCCccCHHHHHHHHHHHhCccc-ccccCcEEEecCCc
Confidence            000000001 1111111                 2223568999999999999997632 12356899998764

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=98.36  E-value=9e-08  Score=74.59  Aligned_cols=118  Identities=13%  Similarity=0.017  Sum_probs=78.5

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      +.+..+||++||...+..           ..+...|+.+|.+.+.+.+.++.++  .++.+.+++|+.+.++....    
T Consensus       140 ~~~~g~iv~isS~~~~~~-----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----  204 (260)
T 2zat_A          140 KRGGGSVLIVSSVGAYHP-----------FPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQV----  204 (260)
T ss_dssp             HTTCEEEEEECCGGGTSC-----------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHH----
T ss_pred             HcCCCEEEEEechhhcCC-----------CCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchh----
Confidence            456779999999888742           1235689999999999998886653  17999999999998862100    


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcC
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTS  158 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s  158 (208)
                         ....  -........                 ....+.+.+.+|+|+++..++..+. ....++++++.+|..+|
T Consensus       205 ---~~~~--~~~~~~~~~-----------------~~~~~~~~~~~dva~~v~~l~s~~~-~~~tG~~~~vdgG~~~s  259 (260)
T 2zat_A          205 ---LWMD--KARKEYMKE-----------------SLRIRRLGNPEDCAGIVSFLCSEDA-SYITGETVVVGGGTASR  259 (260)
T ss_dssp             ---HHSS--HHHHHHHHH-----------------HHTCSSCBCGGGGHHHHHHHTSGGG-TTCCSCEEEESTTCCCC
T ss_pred             ---cccC--hHHHHHHHh-----------------cCCCCCCCCHHHHHHHHHHHcCccc-CCccCCEEEECCCcccc
Confidence               0000  000000100                 1112357899999999999987632 22467899999888765

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=98.35  E-value=2.9e-07  Score=71.17  Aligned_cols=117  Identities=9%  Similarity=-0.056  Sum_probs=76.6

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      +.+..+||++||...+...         +..+.+.|+.+|.+.|.+++.++.++  .+++++++||+.++++....    
T Consensus       133 ~~~~~~iv~isS~~~~~~~---------~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~----  199 (254)
T 2wsb_A          133 ARGAGAIVNLGSMSGTIVN---------RPQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLK----  199 (254)
T ss_dssp             HHTCEEEEEECCGGGTSCC---------SSSCBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHH----
T ss_pred             hcCCcEEEEEecchhccCC---------CCCcchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhc----
Confidence            3467799999998776421         11234789999999999998876553  27999999999999962100    


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                          ... ............                 ..+.+++++|+|++++.++.... ....|+.+++.+|.
T Consensus       200 ----~~~-~~~~~~~~~~~~-----------------~~~~~~~~~dva~~~~~l~~~~~-~~~~G~~~~v~gG~  251 (254)
T 2wsb_A          200 ----MRE-RPELFETWLDMT-----------------PMGRCGEPSEIAAAALFLASPAA-SYVTGAILAVDGGY  251 (254)
T ss_dssp             ----HHT-CHHHHHHHHHTS-----------------TTSSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTG
T ss_pred             ----ccc-ChHHHHHHHhcC-----------------CCCCCCCHHHHHHHHHHHhCccc-ccccCCEEEECCCE
Confidence                000 001122222211                 12347899999999999987632 23457899998764

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=98.35  E-value=7.2e-07  Score=69.33  Aligned_cols=118  Identities=12%  Similarity=0.001  Sum_probs=77.6

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      +.+..++|++||...+..           ..+...|+.+|.+.+.+.+.++.++  .++.+.+++|+.+.++.       
T Consensus       125 ~~~~g~iv~isS~~~~~~-----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~-------  186 (256)
T 2d1y_A          125 KVGGGAIVNVASVQGLFA-----------EQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEA-------  186 (256)
T ss_dssp             TTTCEEEEEECCGGGTSB-----------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH-------
T ss_pred             hcCCcEEEEEccccccCC-----------CCCChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCch-------
Confidence            446679999999766531           1234689999999999998887653  17999999999998751       


Q ss_pred             CCCCCCCChHHHHHHH----H-hCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           81 DPRGIPNNLMPFVTQV----A-VGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                                  ....    . ...  ....+.      .....+.+++++|+|++++.++..+. ....++.+++.+|.
T Consensus       187 ------------~~~~~~~~~~~~~--~~~~~~------~~~~~~~~~~~~dvA~~~~~l~s~~~-~~~~G~~~~v~gG~  245 (256)
T 2d1y_A          187 ------------VLEAIALSPDPER--TRRDWE------DLHALRRLGKPEEVAEAVLFLASEKA-SFITGAILPVDGGM  245 (256)
T ss_dssp             ------------HHHHHC----------CHHHH------TTSTTSSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTG
T ss_pred             ------------hhhccccccCCHH--HHHHHH------hcCCCCCCcCHHHHHHHHHHHhCchh-cCCCCCEEEECCCc
Confidence                        1111    0 000  000011      12223568999999999999987632 23467899998886


Q ss_pred             CcCH
Q 028478          156 GTSV  159 (208)
Q Consensus       156 ~~s~  159 (208)
                      ..+.
T Consensus       246 ~~~~  249 (256)
T 2d1y_A          246 TASF  249 (256)
T ss_dssp             GGBC
T ss_pred             cccc
Confidence            5443

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=98.31  E-value=6e-07  Score=69.86  Aligned_cols=117  Identities=14%  Similarity=0.081  Sum_probs=78.4

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      .+..+||++||...+..           ..+...|+.+|.+.+.+.+.++.++  .++.+..++||.+.++....     
T Consensus       137 ~~~g~iv~isS~~~~~~-----------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~-----  200 (256)
T 3gaf_A          137 AGGGAILNISSMAGENT-----------NVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALAT-----  200 (256)
T ss_dssp             TTCEEEEEECCGGGTCC-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHH-----
T ss_pred             cCCcEEEEEcCHHHcCC-----------CCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhh-----
Confidence            44568999999876632           2235689999999999999887653  27999999999998852100     


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCH
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSV  159 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~  159 (208)
                            ...+.........                ...+.+.+.+|+|++++.++... .....|+++++.+|...++
T Consensus       201 ------~~~~~~~~~~~~~----------------~p~~r~~~~~dva~~~~~L~s~~-~~~itG~~i~vdgG~~~~~  255 (256)
T 3gaf_A          201 ------VLTPEIERAMLKH----------------TPLGRLGEAQDIANAALFLCSPA-AAWISGQVLTVSGGGVQEL  255 (256)
T ss_dssp             ------HCCHHHHHHHHTT----------------CTTSSCBCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTSCCC-
T ss_pred             ------ccCHHHHHHHHhc----------------CCCCCCCCHHHHHHHHHHHcCCc-ccCccCCEEEECCCccccC
Confidence                  0001111111111                11234789999999999998752 2235679999998877664

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=98.31  E-value=1.6e-06  Score=68.27  Aligned_cols=122  Identities=8%  Similarity=0.028  Sum_probs=77.8

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      +.+..+||++||...+..           ..+...|+.+|.+.+.+.+.++.++  .++.+.+++||.+.++........
T Consensus       149 ~~~~g~iv~isS~~~~~~-----------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~  217 (277)
T 4dqx_A          149 RNGGGSIINTTSYTATSA-----------IADRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAE  217 (277)
T ss_dssp             TTTCEEEEEECCGGGTSC-----------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHT
T ss_pred             HcCCcEEEEECchhhCcC-----------CCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhccc
Confidence            345569999999877632           2235689999999999998887653  279999999999987510000000


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcC
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTS  158 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s  158 (208)
                           ............                 .......+.+.+|+|++++.++.... ....|+++++.+|..++
T Consensus       218 -----~~~~~~~~~~~~-----------------~~~~~~r~~~pedvA~~v~~L~s~~~-~~itG~~i~vdGG~~~~  272 (277)
T 4dqx_A          218 -----AKDPAKLRSDFN-----------------ARAVMDRMGTAEEIAEAMLFLASDRS-RFATGSILTVDGGSSIG  272 (277)
T ss_dssp             -----CSCHHHHHHHHH-----------------TTSTTCSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESSSSSSC
T ss_pred             -----ccchhHHHHHHH-----------------hcCcccCCcCHHHHHHHHHHHhCCcc-CCCcCCEEEECCchhhh
Confidence                 000000111111                 11223447889999999999987632 23567999999887654

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=98.30  E-value=4.7e-07  Score=70.08  Aligned_cols=112  Identities=18%  Similarity=0.144  Sum_probs=53.3

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      .+..+||++||...+.              +...|+.+|.+.+.+.+.++.++  .++.+.+++||.+.++......   
T Consensus       138 ~~~g~iv~isS~~~~~--------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---  200 (253)
T 3qiv_A          138 RGGGAIVNQSSTAAWL--------------YSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTT---  200 (253)
T ss_dssp             HTCEEEEEECC-------------------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC---------------
T ss_pred             cCCCEEEEECCccccC--------------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcC---
Confidence            3456899999987762              23569999999999999888765  3799999999999987321100   


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCc
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGT  157 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~  157 (208)
                          ..   .+......                 +.....+..++|+|++++.++.... ....|++|++.+|..+
T Consensus       201 ----~~---~~~~~~~~-----------------~~~~~~~~~~~dva~~~~~l~s~~~-~~~tG~~~~vdgG~~~  251 (253)
T 3qiv_A          201 ----PK---EMVDDIVK-----------------GLPLSRMGTPDDLVGMCLFLLSDEA-SWITGQIFNVDGGQII  251 (253)
T ss_dssp             -------------------------------------------CCHHHHHHHHHHSGGG-TTCCSCEEEC------
T ss_pred             ----cH---HHHHHHhc-----------------cCCCCCCCCHHHHHHHHHHHcCccc-cCCCCCEEEECCCeec
Confidence                00   01111111                 1112335678999999999987632 2346799999887654

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=98.30  E-value=9.2e-07  Score=69.26  Aligned_cols=121  Identities=11%  Similarity=-0.037  Sum_probs=77.7

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      .+..+||++||...+..           ..+...|+.+|.+.+.+.+.++.++  .++.+.+++||.+.++........ 
T Consensus       143 ~~~g~iv~isS~~~~~~-----------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-  210 (266)
T 3uxy_A          143 AGGGAIVNVASCWGLRP-----------GPGHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAK-  210 (266)
T ss_dssp             HTCEEEEEECCSBTTBC-----------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHH-
T ss_pred             cCCcEEEEECCHHhCCC-----------CCCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhc-
Confidence            45568999999766531           2245689999999999998887653  279999999999988621000000 


Q ss_pred             CCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcC
Q 028478           82 PRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTS  158 (208)
Q Consensus        82 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s  158 (208)
                          ...... ......                 .....+.+.+.+|+|++++.++.... ....|+++++.+|..++
T Consensus       211 ----~~~~~~~~~~~~~-----------------~~~p~~r~~~pedvA~~v~~L~s~~~-~~itG~~i~vdGG~~~s  266 (266)
T 3uxy_A          211 ----RGFDPDRAVAELG-----------------RTVPLGRIAEPEDIADVVLFLASDAA-RYLCGSLVEVNGGKAVA  266 (266)
T ss_dssp             ----TTCCHHHHHHHHH-----------------TTSTTSSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTCCCC
T ss_pred             ----ccccchHHHHHHH-----------------hcCCCCCCcCHHHHHHHHHHHhCchh-cCCcCCEEEECcCEeCC
Confidence                000000 111111                 12223457899999999999997632 23567999998887543

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=98.29  E-value=9.2e-07  Score=68.64  Aligned_cols=122  Identities=9%  Similarity=-0.026  Sum_probs=77.1

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      +.+..+||++||...+...           .+...|+.+|.+.+.+.+.++.+.  .++.+++++||.+.++..      
T Consensus       127 ~~~~g~iv~isS~~~~~~~-----------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~------  189 (255)
T 2q2v_A          127 ARNWGRIINIASVHGLVGS-----------TGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLV------  189 (255)
T ss_dssp             HTTCEEEEEECCGGGTSCC-----------TTBHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHH------
T ss_pred             HcCCcEEEEEcCchhccCC-----------CCchhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcch------
Confidence            4566799999998776421           234689999999999999887764  279999999999998620      


Q ss_pred             CCCCCCCChHHHHHHHHhCCCC--eeEEE-ccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRP--ELTVF-GTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                            ..+.......  +...  ....+ .      .....+.+++++|+|++++.++..+. ....++.|++.+|..
T Consensus       190 ------~~~~~~~~~~--~~~~~~~~~~~~~------~~~p~~~~~~~~dvA~~~~~l~s~~~-~~~tG~~~~vdgG~~  253 (255)
T 2q2v_A          190 ------QKQIDDRAAN--GGDPLQAQHDLLA------EKQPSLAFVTPEHLGELVLFLCSEAG-SQVRGAAWNVDGGWL  253 (255)
T ss_dssp             ------HHHHHHHHHH--TCCHHHHHHHHHT------TTCTTCCCBCHHHHHHHHHHHTSGGG-TTCCSCEEEESTTGG
T ss_pred             ------hhhccccccc--ccchHHHHHHHHh------ccCCCCCCcCHHHHHHHHHHHhCCcc-CCCCCCEEEECCCcc
Confidence                  0000000000  0000  00000 1      12223458999999999999987632 224578999987753

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=98.29  E-value=1.5e-06  Score=68.41  Aligned_cols=128  Identities=10%  Similarity=-0.007  Sum_probs=79.6

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCC--C
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKI--G   79 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~--~   79 (208)
                      .+..+||++||...+..           ..+...|+.+|.+.+.+.+.++.++  .++.+.+++||.|+++......  +
T Consensus       148 ~~~g~iv~isS~~~~~~-----------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~  216 (281)
T 3s55_A          148 RNYGRIVTVSSMLGHSA-----------NFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFG  216 (281)
T ss_dssp             HTCEEEEEECCGGGGSC-----------CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHH
T ss_pred             cCCCEEEEECChhhcCC-----------CCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhc
Confidence            34568999999877632           1235689999999999999887753  1799999999999997421100  0


Q ss_pred             CCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcC
Q 028478           80 EDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTS  158 (208)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s  158 (208)
                      ....................               .....+.+.+.+|+|++++.++.... ....|+++++.+|...+
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~p~dvA~~v~~L~s~~~-~~itG~~i~vdgG~~~~  279 (281)
T 3s55_A          217 TMRPDLEKPTLKDVESVFAS---------------LHLQYAPFLKPEEVTRAVLFLVDEAS-SHITGTVLPIDAGATAR  279 (281)
T ss_dssp             C-------CCHHHHHHHHHH---------------HCSSSCSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTGGGG
T ss_pred             cccccccccchhHHHHHHHh---------------hhccCcCCCCHHHHHHHHHHHcCCcc-cCCCCCEEEECCCcccC
Confidence            00000000000000000000               11223678999999999999998632 23567999999886544

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=98.29  E-value=2.8e-07  Score=70.81  Aligned_cols=112  Identities=8%  Similarity=-0.036  Sum_probs=74.6

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      .+..+||++||...+...           .+...|+.+|.+.+.+.+.++.+.  .++.++++||+.++++...      
T Consensus       128 ~~~~~iv~~sS~~~~~~~-----------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~------  190 (244)
T 1edo_A          128 KRKGRIINIASVVGLIGN-----------IGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTA------  190 (244)
T ss_dssp             HTCEEEEEECCTHHHHCC-----------TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHH------
T ss_pred             cCCCEEEEECChhhcCCC-----------CCCccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhh------
Confidence            356799999997654211           135689999999999988877652  2799999999999986210      


Q ss_pred             CCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           82 PRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        82 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                            .+.. ...... ..   .             ..+.+++.+|+|+++..++..+......|+.|++.+|.
T Consensus       191 ------~~~~~~~~~~~-~~---~-------------~~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gG~  242 (244)
T 1edo_A          191 ------KLGEDMEKKIL-GT---I-------------PLGRTGQPENVAGLVEFLALSPAASYITGQAFTIDGGI  242 (244)
T ss_dssp             ------TTCHHHHHHHH-TS---C-------------TTCSCBCHHHHHHHHHHHHHCSGGGGCCSCEEEESTTT
T ss_pred             ------hcChHHHHHHh-hc---C-------------CCCCCCCHHHHHHHHHHHhCCCccCCcCCCEEEeCCCc
Confidence                  0111 222221 11   0             12347899999999999985432223457899998765

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=98.29  E-value=5.4e-06  Score=64.57  Aligned_cols=112  Identities=9%  Similarity=-0.035  Sum_probs=72.7

Q ss_pred             CCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCC
Q 028478            5 GCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDP   82 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~   82 (208)
                      +..+||++||...+..           ..+...|+.+|.+.+.+.+.++.+.  .++.+.+++||.+.++....      
T Consensus       152 ~~~~iv~~sS~~~~~~-----------~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~------  214 (266)
T 3o38_A          152 HGGVIVNNASVLGWRA-----------QHSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEK------  214 (266)
T ss_dssp             CCEEEEEECCGGGTCC-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-----------
T ss_pred             CCeEEEEeCCHHHcCC-----------CCCCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhc------
Confidence            4458999999776532           2245789999999999999887652  18999999999998863110      


Q ss_pred             CCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           83 RGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                                   .....  ....+.      .......+.+.+|+|++++.++.... ....|+++++.+|.
T Consensus       215 -------------~~~~~--~~~~~~------~~~~~~r~~~~~dva~~i~~l~s~~~-~~~tG~~i~vdgG~  265 (266)
T 3o38_A          215 -------------TSSSE--LLDRLA------SDEAFGRAAEPWEVAATIAFLASDYS-SYMTGEVVSVSSQR  265 (266)
T ss_dssp             ---------------------------------CCTTSSCCCHHHHHHHHHHHHSGGG-TTCCSCEEEESSCC
T ss_pred             -------------cCcHH--HHHHHH------hcCCcCCCCCHHHHHHHHHHHcCccc-cCccCCEEEEcCCc
Confidence                         00000  011111      12233457899999999999987632 24667999998764

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=98.28  E-value=6.5e-07  Score=69.01  Aligned_cols=114  Identities=11%  Similarity=-0.055  Sum_probs=76.4

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      .+.+++|++||...+...           .+...|+.+|.+.|.+++.++.++  .++.++++||+.++++....     
T Consensus       132 ~~~~~iv~isS~~~~~~~-----------~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~-----  195 (250)
T 2cfc_A          132 QGAGVIVNIASVASLVAF-----------PGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQW-----  195 (250)
T ss_dssp             HTCEEEEEECCGGGTSCC-----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHH-----
T ss_pred             CCCCEEEEECChhhccCC-----------CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCcccc-----
Confidence            467799999998776421           235689999999999998886543  27999999999999973110     


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                       ..  . ...+........  +               ...+.+.+|+|++++.++..+. ....|+.+++.+|.
T Consensus       196 -~~--~-~~~~~~~~~~~~--~---------------~~~~~~~~dva~~~~~l~~~~~-~~~~G~~~~v~gG~  247 (250)
T 2cfc_A          196 -RL--D-QPELRDQVLARI--P---------------QKEIGTAAQVADAVMFLAGEDA-TYVNGAALVMDGAY  247 (250)
T ss_dssp             -HH--T-SHHHHHHHHTTC--T---------------TCSCBCHHHHHHHHHHHHSTTC-TTCCSCEEEESTTG
T ss_pred             -cc--C-CHHHHHHHHhcC--C---------------CCCCcCHHHHHHHHHHHcCchh-hcccCCEEEECCce
Confidence             00  0 001222222211  1               1247899999999999987632 23457899998764

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=98.27  E-value=3.8e-07  Score=70.67  Aligned_cols=127  Identities=6%  Similarity=-0.145  Sum_probs=72.1

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCC-----------------CCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEE
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEE-----------------FPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIIL   63 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~-----------------~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~i   63 (208)
                      +.+..++|++||...+......+..++                 .+..+...|+.+|.+.+.+.+.++.++  .++.+++
T Consensus       103 ~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~  182 (257)
T 1fjh_A          103 KGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNT  182 (257)
T ss_dssp             TSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEE
T ss_pred             hcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEE
Confidence            445679999999888732111000000                 122245689999999999998887652  2899999


Q ss_pred             EecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCC
Q 028478           64 LRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPK  143 (208)
Q Consensus        64 iR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~  143 (208)
                      ++||.+.++......       ...   ........    +   .        .....+++.+|+|++++.++..+. ..
T Consensus       183 v~PG~v~t~~~~~~~-------~~~---~~~~~~~~----~---~--------~~~~~~~~~~dvA~~~~~l~~~~~-~~  236 (257)
T 1fjh_A          183 IAPGATETPLLQAGL-------QDP---RYGESIAK----F---V--------PPMGRRAEPSEMASVIAFLMSPAA-SY  236 (257)
T ss_dssp             EEECC-----------------------------------C---C--------CSTTSCCCTHHHHHHHHHHTSGGG-TT
T ss_pred             EeeCCCCCccchhhc-------cch---hHHHHHHh----c---c--------cccCCCCCHHHHHHHHHHHhCchh-cC
Confidence            999999886311000       000   00000000    0   0        011237899999999999997632 23


Q ss_pred             CCCceEEecCCC
Q 028478          144 IGCEVYNLGTGK  155 (208)
Q Consensus       144 ~~~~~~ni~~~~  155 (208)
                      ..|+.+++.+|.
T Consensus       237 ~tG~~~~vdgG~  248 (257)
T 1fjh_A          237 VHGAQIVIDGGI  248 (257)
T ss_dssp             CCSCEEEESTTH
T ss_pred             CcCCEEEECCCc
Confidence            567889888764

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=98.27  E-value=4.1e-06  Score=65.26  Aligned_cols=112  Identities=13%  Similarity=0.021  Sum_probs=77.6

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      +.+..++|++||...+..         .+..+...|+.+|.+.+.+.+.++.++  .++.+.+++||.+.++..+     
T Consensus       144 ~~~~g~iv~isS~~~~~~---------~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~-----  209 (260)
T 3un1_A          144 KQGSGHIVSITTSLVDQP---------MVGMPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHP-----  209 (260)
T ss_dssp             HTTCEEEEEECCTTTTSC---------BTTCCCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSC-----
T ss_pred             HcCCcEEEEEechhhccC---------CCCCccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCC-----
Confidence            456678999999776532         122345789999999999999987765  2799999999999997311     


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCc
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGT  157 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~  157 (208)
                            ..   ..... ...                ...+.+.+++|+|++++.+.+.   ....|+++++.+|...
T Consensus       210 ------~~---~~~~~-~~~----------------~p~~r~~~~~dva~av~~L~~~---~~itG~~i~vdGG~~~  257 (260)
T 3un1_A          210 ------AE---THSTL-AGL----------------HPVGRMGEIRDVVDAVLYLEHA---GFITGEILHVDGGQNA  257 (260)
T ss_dssp             ------GG---GHHHH-HTT----------------STTSSCBCHHHHHHHHHHHHHC---TTCCSCEEEESTTGGG
T ss_pred             ------HH---HHHHH-hcc----------------CCCCCCcCHHHHHHHHHHhccc---CCCCCcEEEECCCeec
Confidence                  00   11111 111                1123467899999999998443   2356799999887643

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=98.26  E-value=3.4e-06  Score=64.50  Aligned_cols=109  Identities=13%  Similarity=0.009  Sum_probs=75.2

Q ss_pred             EEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCCC
Q 028478            8 NLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRGI   85 (208)
Q Consensus         8 ~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~~   85 (208)
                      +||++||...+...           .+...|+.+|.+.+.+.+.++.+.  .++.++++||+.++++...        . 
T Consensus       129 ~iv~~sS~~~~~~~-----------~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~--------~-  188 (242)
T 1uay_A          129 VIVNTASVAAFEGQ-----------IGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQ--------G-  188 (242)
T ss_dssp             EEEEECCTHHHHCC-----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHH--------T-
T ss_pred             EEEEeCChhhccCC-----------CCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhh--------c-
Confidence            89999998877531           235689999999999988876542  1799999999999996311        0 


Q ss_pred             CCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcC
Q 028478           86 PNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTS  158 (208)
Q Consensus        86 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s  158 (208)
                         +.. +........  ++              ...+++++|+|++++.++..   ....|+.|++.+|..++
T Consensus       189 ---~~~~~~~~~~~~~--~~--------------~~~~~~~~dva~~~~~l~~~---~~~~G~~~~v~gG~~~~  240 (242)
T 1uay_A          189 ---LPEKAKASLAAQV--PF--------------PPRLGRPEEYAALVLHILEN---PMLNGEVVRLDGALRMA  240 (242)
T ss_dssp             ---SCHHHHHHHHTTC--CS--------------SCSCCCHHHHHHHHHHHHHC---TTCCSCEEEESTTCCCC
T ss_pred             ---cchhHHHHHHhhC--CC--------------cccCCCHHHHHHHHHHHhcC---CCCCCcEEEEcCCeecC
Confidence               111 222222211  11              02378999999999999986   23567899998886543

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=98.25  E-value=1.6e-06  Score=66.71  Aligned_cols=113  Identities=12%  Similarity=-0.021  Sum_probs=74.9

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      +.+.++||++||...+...           .+...|+.+|.+.+.+.+.++.+.  .++.++++||+.++++...     
T Consensus       133 ~~~~~~iv~~sS~~~~~~~-----------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~-----  196 (248)
T 2pnf_A          133 KQRWGRIVNISSVVGFTGN-----------VGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTA-----  196 (248)
T ss_dssp             HHTCEEEEEECCHHHHHCC-----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGG-----
T ss_pred             hcCCcEEEEEccHHhcCCC-----------CCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhh-----
Confidence            3467799999997554211           134689999999999998876543  2799999999999986311     


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                             .+............                ....+++++|+|+++..++.... ....+++|++.+|.
T Consensus       197 -------~~~~~~~~~~~~~~----------------~~~~~~~~~dva~~~~~l~~~~~-~~~~G~~~~v~gg~  247 (248)
T 2pnf_A          197 -------VLSEEIKQKYKEQI----------------PLGRFGSPEEVANVVLFLCSELA-SYITGEVIHVNGGM  247 (248)
T ss_dssp             -------GSCHHHHHHHHHTC----------------TTSSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTC
T ss_pred             -------hccHHHHHHHHhcC----------------CCCCccCHHHHHHHHHHHhCchh-hcCCCcEEEeCCCc
Confidence                   01111111111110                11347899999999999987632 23457899998764

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=98.25  E-value=4.1e-06  Score=64.82  Aligned_cols=103  Identities=12%  Similarity=0.105  Sum_probs=76.0

Q ss_pred             EEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC----CCccEEEEecccccCCCCCCCCCCCCC
Q 028478            8 NLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD----SEWKIILLRYFNPVGAHPSGKIGEDPR   83 (208)
Q Consensus         8 ~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~iiR~~~i~G~~~~~~~~~~~~   83 (208)
                      +||++||...+..           ..+...|+.+|.+.+.+.+.++.++    .++.+.+++||.+.++           
T Consensus       139 ~iv~isS~~~~~~-----------~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~-----------  196 (251)
T 3orf_A          139 LFVLTGASAALNR-----------TSGMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTP-----------  196 (251)
T ss_dssp             EEEEECCGGGGSC-----------CTTBHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCH-----------
T ss_pred             EEEEEechhhccC-----------CCCCchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCc-----------
Confidence            7999999876632           2235689999999999999998772    3799999999998875           


Q ss_pred             CCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCc
Q 028478           84 GIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGT  157 (208)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~  157 (208)
                              +......                 ......+++.+|+|++++.++..+......|+.+++..++..
T Consensus       197 --------~~~~~~~-----------------~~~~~~~~~~~dva~~i~~l~~~~~~~~~tG~~i~v~~g~~~  245 (251)
T 3orf_A          197 --------TNRKYMS-----------------DANFDDWTPLSEVAEKLFEWSTNSDSRPTNGSLVKFETKSKV  245 (251)
T ss_dssp             --------HHHHHCT-----------------TSCGGGSBCHHHHHHHHHHHHHCGGGCCCTTCEEEEEEETTE
T ss_pred             --------chhhhcc-----------------cccccccCCHHHHHHHHHHHhcCccccCCcceEEEEecCCcc
Confidence                    3222211                 122345789999999999999874334567789999876643

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=98.23  E-value=1.9e-06  Score=67.16  Aligned_cols=111  Identities=11%  Similarity=-0.056  Sum_probs=74.6

Q ss_pred             CCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCC
Q 028478            6 CKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPR   83 (208)
Q Consensus         6 vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~   83 (208)
                      ..++|++||...+..           ..+...|+.+|.+.+.+.+.++.+.  .++.++++||+.++++...        
T Consensus       138 ~g~iv~isS~~~~~~-----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--------  198 (263)
T 3ak4_A          138 KGVIVNTASLAAKVG-----------APLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQE--------  198 (263)
T ss_dssp             CCEEEEECCGGGTSC-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHH--------
T ss_pred             CeEEEEecccccccC-----------CCCchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhh--------
Confidence            569999999876532           1235689999999999998876653  2799999999999986200        


Q ss_pred             CCCCChH-----------H-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEe
Q 028478           84 GIPNNLM-----------P-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNL  151 (208)
Q Consensus        84 ~~~~~~~-----------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni  151 (208)
                          ...           . .......                 ....+.+++.+|+|++++.++..+. ....|+.|++
T Consensus       199 ----~~~~~~~~~~~~~~~~~~~~~~~-----------------~~p~~~~~~~~dvA~~v~~l~s~~~-~~~tG~~~~v  256 (263)
T 3ak4_A          199 ----REIIWEAELRGMTPEAVRAEYVS-----------------LTPLGRIEEPEDVADVVVFLASDAA-RFMTGQGINV  256 (263)
T ss_dssp             ----HHHHHHHHHHTSCHHHHHHHHHH-----------------TCTTCSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEE
T ss_pred             ----hhccccccccccCcHHHHHHHHh-----------------cCCCCCCcCHHHHHHHHHHHhCccc-cCCCCCEEEE
Confidence                000           0 0011111                 1112358899999999999997632 2356789999


Q ss_pred             cCCCCc
Q 028478          152 GTGKGT  157 (208)
Q Consensus       152 ~~~~~~  157 (208)
                      .+|..+
T Consensus       257 dgG~~~  262 (263)
T 3ak4_A          257 TGGVRM  262 (263)
T ss_dssp             SSSSSC
T ss_pred             CcCEeC
Confidence            887543

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=98.23  E-value=4.3e-06  Score=64.87  Aligned_cols=114  Identities=11%  Similarity=0.040  Sum_probs=75.4

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      +.+..+||++||...+..           ..+...|+.+|.+.+.+.+.++.+.  .++.+++++||.++++        
T Consensus       127 ~~~~g~iv~isS~~~~~~-----------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~--------  187 (254)
T 1hdc_A          127 DAGGGSIVNISSAAGLMG-----------LALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTP--------  187 (254)
T ss_dssp             HHTCEEEEEECCGGGTSC-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH--------
T ss_pred             HcCCCEEEEECchhhccC-----------CCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCc--------
Confidence            345679999999877642           1235689999999999998887653  2799999999999986        


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeee-eHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYI-HVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                                 +...........+  .       .......+. +.+|+|++++.++..+. ....|+.+++.+|..
T Consensus       188 -----------~~~~~~~~~~~~~--~-------~~~p~~~~~~~~~dvA~~v~~l~s~~~-~~~tG~~~~vdgG~~  243 (254)
T 1hdc_A          188 -----------MTAETGIRQGEGN--Y-------PNTPMGRVGNEPGEIAGAVVKLLSDTS-SYVTGAELAVDGGWT  243 (254)
T ss_dssp             -----------HHHHHTCCCSTTS--C-------TTSTTSSCB-CHHHHHHHHHHHHSGGG-TTCCSCEEEESTTTT
T ss_pred             -----------cccccchhHHHHH--H-------hcCCCCCCCCCHHHHHHHHHHHhCchh-cCCCCCEEEECCCcc
Confidence                       1111110000000  0       011112367 99999999999987632 235678999987753

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=98.23  E-value=6.2e-06  Score=63.75  Aligned_cols=124  Identities=13%  Similarity=0.014  Sum_probs=69.2

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      +.+..++|++||...+..           ..+...|+.+|.+.+.+.+.++.+.  .++.+++++|+.+.++....... 
T Consensus       122 ~~~~g~iv~isS~~~~~~-----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-  189 (250)
T 2fwm_X          122 RQRGGAIVTVASDAAHTP-----------RIGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWV-  189 (250)
T ss_dssp             HHTCCEEEEECCGGGTSC-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-----------
T ss_pred             hcCCCEEEEECchhhCCC-----------CCCCchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCcccccccc-
Confidence            345679999999877632           2245689999999999999887652  27999999999999874211000 


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                       .    ..   .........   ...+.      .......+.+.+|+|++++.++..+. ....|+.+++.+|..
T Consensus       190 -~----~~---~~~~~~~~~---~~~~~------~~~p~~~~~~p~dvA~~v~~l~s~~~-~~~tG~~i~vdGG~~  247 (250)
T 2fwm_X          190 -S----DD---AEEQRIRGF---GEQFK------LGIPLGKIARPQEIANTILFLASDLA-SHITLQDIVVDGGST  247 (250)
T ss_dssp             -------------------------------------------CHHHHHHHHHHHHSGGG-TTCCSCEEEESTTTT
T ss_pred             -C----hh---HHHHHHhhh---hhccc------ccCCCCCCcCHHHHHHHHHHHhCccc-cCCCCCEEEECCCcc
Confidence             0    00   000000000   00000      00111237899999999999987632 235678999887754

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=98.21  E-value=1.6e-06  Score=67.18  Aligned_cols=113  Identities=8%  Similarity=-0.005  Sum_probs=76.0

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      +.+..+||++||...+..           ..+...|+.+|.+.+.+.+.++.+.  .++.+++++||.+.++...     
T Consensus       129 ~~~~g~iv~isS~~~~~~-----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-----  192 (249)
T 1o5i_A          129 EKGWGRIVAITSFSVISP-----------IENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVK-----  192 (249)
T ss_dssp             HHTCEEEEEECCGGGTSC-----------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHH-----
T ss_pred             HcCCcEEEEEcchHhcCC-----------CCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCccc-----
Confidence            346679999999888742           1235689999999999998876642  2899999999999986310     


Q ss_pred             CCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           81 DPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        81 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                             .... .........                .....+.+.+|+|++++.++.... ....|+.+++.+|.
T Consensus       193 -------~~~~~~~~~~~~~~----------------~p~~~~~~~~dvA~~i~~l~s~~~-~~~tG~~~~vdgG~  244 (249)
T 1o5i_A          193 -------ELLSEEKKKQVESQ----------------IPMRRMAKPEEIASVVAFLCSEKA-SYLTGQTIVVDGGL  244 (249)
T ss_dssp             -------HHSCHHHHHHHHTT----------------STTSSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTC
T ss_pred             -------ccchhhHHHHHHhc----------------CCCCCCcCHHHHHHHHHHHcCccc-cCCCCCEEEECCCc
Confidence                   0000 111011111                011347899999999999987632 23457899998775

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=98.21  E-value=9.8e-06  Score=63.44  Aligned_cols=112  Identities=18%  Similarity=0.033  Sum_probs=77.4

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhc---CCCccEEEEecccccCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRS---DSEWKIILLRYFNPVGAHPSGKIG   79 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~iiR~~~i~G~~~~~~~~   79 (208)
                      +.+..+||++||...+..           ..+...|+.+|.+.+.+.+.++.+   + ++.+.+++||.+.++....   
T Consensus       135 ~~~~g~iv~isS~~~~~~-----------~~~~~~Y~asKaa~~~l~~~la~e~~~~-gi~vn~v~PG~v~t~~~~~---  199 (271)
T 3tzq_B          135 SAGGGAIVNISSATAHAA-----------YDMSTAYACTKAAIETLTRYVATQYGRH-GVRCNAIAPGLVRTPRLEV---  199 (271)
T ss_dssp             HTTCEEEEEECCGGGTSB-----------CSSCHHHHHHHHHHHHHHHHHHHHHGGG-TEEEEEEEECCBCCTTTC----
T ss_pred             hcCCCEEEEECCHHHcCC-----------CCCChHHHHHHHHHHHHHHHHHHHHhhc-CEEEEEEEeCCCcCccccc---
Confidence            345669999999877632           223568999999999999988776   5 8999999999999974210   


Q ss_pred             CCCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           80 EDPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        80 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                          .    +.. ..... .... +               ..-+...+|+|++++.++... .....|+++++.+|.
T Consensus       200 ----~----~~~~~~~~~-~~~~-~---------------~~r~~~p~dvA~~v~~L~s~~-~~~itG~~i~vdGG~  250 (271)
T 3tzq_B          200 ----G----LPQPIVDIF-ATHH-L---------------AGRIGEPHEIAELVCFLASDR-AAFITGQVIAADSGL  250 (271)
T ss_dssp             ----------CHHHHHHH-HTTS-T---------------TSSCBCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTT
T ss_pred             ----c----CCHHHHHHH-HhcC-C---------------CCCCcCHHHHHHHHHHHhCcc-cCCcCCCEEEECCCc
Confidence                0    111 22222 2221 1               123678999999999998763 223567999998874

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=98.21  E-value=5.4e-06  Score=63.94  Aligned_cols=111  Identities=12%  Similarity=-0.029  Sum_probs=76.2

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      .+..++|++||...+..           ..+...|+.+|.+.+.+.+.++.++  .++.+.+++||.+.++...      
T Consensus       131 ~~~g~iv~isS~~~~~~-----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~------  193 (246)
T 3osu_A          131 QRSGAIINLSSVVGAVG-----------NPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTD------  193 (246)
T ss_dssp             HTCEEEEEECCHHHHHC-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCS------
T ss_pred             cCCCEEEEEcchhhcCC-----------CCCChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCccc------
Confidence            45568999999766532           1235689999999999998887632  1799999999999987421      


Q ss_pred             CCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           82 PRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        82 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                            .+.+ .........  +               ...+.+.+|+|++++.++.... ....|++|++.+|.
T Consensus       194 ------~~~~~~~~~~~~~~--p---------------~~r~~~~~dva~~v~~l~s~~~-~~itG~~i~vdgG~  244 (246)
T 3osu_A          194 ------ALSDELKEQMLTQI--P---------------LARFGQDTDIANTVAFLASDKA-KYITGQTIHVNGGM  244 (246)
T ss_dssp             ------CSCHHHHHHHHTTC--T---------------TCSCBCHHHHHHHHHHHTSGGG-TTCCSCEEEESTTS
T ss_pred             ------ccCHHHHHHHHhcC--C---------------CCCCcCHHHHHHHHHHHhCccc-cCCCCCEEEeCCCc
Confidence                  1112 233332221  1               2346788999999999987632 23567999998775

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=98.20  E-value=8.1e-07  Score=68.36  Aligned_cols=111  Identities=10%  Similarity=-0.010  Sum_probs=70.4

Q ss_pred             CCCCEEEEecccc-ccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSAT-VYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         4 ~~vk~~i~~SS~~-vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      .+..+||++||.. .++.            .+...|+.+|.+.|.+++.++.++  .++.+++++|+.+.++...     
T Consensus       132 ~~~~~iv~~sS~~~~~~~------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-----  194 (247)
T 2hq1_A          132 QKSGKIINITSIAGIIGN------------AGQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTD-----  194 (247)
T ss_dssp             HTCEEEEEECC---------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH-----
T ss_pred             cCCcEEEEEcChhhccCC------------CCCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchh-----
Confidence            4667999999964 4442            134689999999999998886643  2789999999998875200     


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                             .+...........                .....+++++|+|+++..++..+. ....+++|++.+|.
T Consensus       195 -------~~~~~~~~~~~~~----------------~~~~~~~~~~dva~~~~~l~~~~~-~~~~G~~~~v~gG~  245 (247)
T 2hq1_A          195 -------VLPDKVKEMYLNN----------------IPLKRFGTPEEVANVVGFLASDDS-NYITGQVINIDGGL  245 (247)
T ss_dssp             -------TSCHHHHHHHHTT----------------STTSSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTC
T ss_pred             -------hcchHHHHHHHhh----------------CCCCCCCCHHHHHHHHHHHcCccc-ccccCcEEEeCCCc
Confidence                   0011111111111                112347899999999999887632 12456899998775

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=98.20  E-value=3.3e-07  Score=70.44  Aligned_cols=113  Identities=9%  Similarity=-0.075  Sum_probs=75.0

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      +.+.++||++||...+...           .+...|+.+|.+.+.+.+.++.+.  .+++++++||+.++++...     
T Consensus       128 ~~~~~~iv~~sS~~~~~~~-----------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-----  191 (245)
T 2ph3_A          128 KARFGRIVNITSVVGILGN-----------PGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTE-----  191 (245)
T ss_dssp             HHTCEEEEEECCTHHHHCC-----------SSBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH-----
T ss_pred             hcCCCEEEEEeChhhccCC-----------CCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchh-----
Confidence            3467899999997654211           134689999999999888876543  2799999999999986211     


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                         ...   ...........                 ..+.+++++|+|++++.++..+. ....++.|++.+|.
T Consensus       192 ---~~~---~~~~~~~~~~~-----------------~~~~~~~~~dva~~~~~l~~~~~-~~~~G~~~~v~gg~  242 (245)
T 2ph3_A          192 ---RLP---QEVKEAYLKQI-----------------PAGRFGRPEEVAEAVAFLVSEKA-GYITGQTLCVDGGL  242 (245)
T ss_dssp             ---TSC---HHHHHHHHHTC-----------------TTCSCBCHHHHHHHHHHHTSGGG-TTCCSCEEEESTTC
T ss_pred             ---hcC---HHHHHHHHhcC-----------------CCCCCcCHHHHHHHHHHHhCccc-ccccCCEEEECCCC
Confidence               000   01222222211                 12347899999999999987632 22457899998764

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=98.20  E-value=1.7e-06  Score=67.17  Aligned_cols=110  Identities=8%  Similarity=-0.114  Sum_probs=73.8

Q ss_pred             CCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCC
Q 028478            6 CKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPR   83 (208)
Q Consensus         6 vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~   83 (208)
                      ..+||++||...+.           +..+...|+.+|.+.+.+.+.++.++  .++.++++||+.++++...        
T Consensus       137 ~~~iv~isS~~~~~-----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--------  197 (261)
T 1gee_A          137 KGTVINMSSVHEKI-----------PWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINA--------  197 (261)
T ss_dssp             CCEEEEECCGGGTS-----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGH--------
T ss_pred             CCEEEEeCCHHhcC-----------CCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhh--------
Confidence            56999999976653           22346789999999998888776542  2799999999999996210        


Q ss_pred             CCCCChH--H-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           84 GIPNNLM--P-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        84 ~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                          ...  + ....... .                .....+++.+|+|++++.++.... ....++.+++.++..
T Consensus       198 ----~~~~~~~~~~~~~~-~----------------~~~~~~~~~~dva~~~~~l~~~~~-~~~~G~~~~v~gg~~  251 (261)
T 1gee_A          198 ----EKFADPEQRADVES-M----------------IPMGYIGEPEEIAAVAAWLASSEA-SYVTGITLFADGGMT  251 (261)
T ss_dssp             ----HHHHSHHHHHHHHT-T----------------CTTSSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTGG
T ss_pred             ----hcccChhHHHHHHh-c----------------CCCCCCcCHHHHHHHHHHHhCccc-cCCCCcEEEEcCCcc
Confidence                010  1 1111111 1                011347899999999999987522 234578999987753

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=98.19  E-value=4.4e-06  Score=64.41  Aligned_cols=112  Identities=9%  Similarity=-0.086  Sum_probs=73.2

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      .+..+||++||...+..           ..+...|+.+|.+.+.+.+.++.++  .++.+.+++||.+.++...      
T Consensus       133 ~~~g~iv~isS~~~~~~-----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~------  195 (249)
T 3f9i_A          133 KRYGRIINISSIVGIAG-----------NPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTD------  195 (249)
T ss_dssp             HTCEEEEEECCCCC--C-----------CSCSHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC-----------
T ss_pred             CCCcEEEEEccHHhccC-----------CCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCccc------
Confidence            34558999999876632           1235689999999999988877652  1799999999999886311      


Q ss_pred             CCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           82 PRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        82 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                            .+.. .......+                 ...+.+.+++|+|+++..++.... ....|+.+++.+|..
T Consensus       196 ------~~~~~~~~~~~~~-----------------~~~~~~~~~~dva~~~~~l~s~~~-~~~tG~~~~vdgG~~  247 (249)
T 3f9i_A          196 ------KLNEKQREAIVQK-----------------IPLGTYGIPEDVAYAVAFLASNNA-SYITGQTLHVNGGML  247 (249)
T ss_dssp             -------CCHHHHHHHHHH-----------------CTTCSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTSS
T ss_pred             ------ccCHHHHHHHHhc-----------------CCCCCCcCHHHHHHHHHHHcCCcc-CCccCcEEEECCCEe
Confidence                  0111 22222221                 123457889999999999998632 235679999988764

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=98.19  E-value=5.9e-06  Score=64.67  Aligned_cols=111  Identities=14%  Similarity=0.048  Sum_probs=68.7

Q ss_pred             CCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCC
Q 028478            6 CKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPR   83 (208)
Q Consensus         6 vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~   83 (208)
                      ..+||++||...+....          .....|+.+|.+.+.+++.++.++  .++.+.+++||.|.++....      .
T Consensus       159 ~g~iv~isS~~~~~~~~----------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~------~  222 (272)
T 4e3z_A          159 GGAIVNVSSMAAILGSA----------TQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHAS------G  222 (272)
T ss_dssp             CEEEEEECCTHHHHCCT----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------
T ss_pred             CCEEEEEcchHhccCCC----------CCcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccc------c
Confidence            45899999977653211          123569999999999988876653  27999999999999863110      0


Q ss_pred             CCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCC
Q 028478           84 GIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTG  154 (208)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~  154 (208)
                      .    .........                 .......+.+++|+|++++.++.... ....|++|++.+|
T Consensus       223 ~----~~~~~~~~~-----------------~~~~~~~~~~~edvA~~i~~l~s~~~-~~~tG~~i~vdgG  271 (272)
T 4e3z_A          223 G----LPDRAREMA-----------------PSVPMQRAGMPEEVADAILYLLSPSA-SYVTGSILNVSGG  271 (272)
T ss_dssp             --------------------------------CCTTSSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTT
T ss_pred             C----ChHHHHHHh-----------------hcCCcCCCcCHHHHHHHHHHHhCCcc-ccccCCEEeecCC
Confidence            0    000111111                 11222346789999999999997632 2356799999876

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=98.18  E-value=4e-06  Score=66.12  Aligned_cols=124  Identities=13%  Similarity=-0.002  Sum_probs=74.4

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      .+..+||++||...+..           ......|+.+|.+.+.+.+.++.++  .++.+.+++||.+.++.........
T Consensus       153 ~~~g~iv~isS~~~~~~-----------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~  221 (281)
T 3v2h_A          153 KGWGRIINIASAHGLVA-----------SPFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQ  221 (281)
T ss_dssp             HTCEEEEEECCGGGTSC-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------
T ss_pred             cCCCEEEEECCcccccC-----------CCCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchh
Confidence            34568999999776632           1234689999999999998887653  2799999999999987422110000


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                              . ......... .....+.      .+...+.+++++|+|++++.++.... ....|+++++.+|.
T Consensus       222 --------~-~~~~~~~~~-~~~~~~~------~~~p~~r~~~~edvA~~v~~L~s~~a-~~itG~~i~vdGG~  278 (281)
T 3v2h_A          222 --------A-RTRGITEEQ-VINEVML------KGQPTKKFITVEQVASLALYLAGDDA-AQITGTHVSMDGGW  278 (281)
T ss_dssp             ----------------------------------CCTTCSCBCHHHHHHHHHHHHSSGG-GGCCSCEEEESTTG
T ss_pred             --------h-hhcCCCHHH-HHHHHHH------hcCCCCCccCHHHHHHHHHHHcCCCc-CCCCCcEEEECCCc
Confidence                    0 000000000 0001112      34445679999999999999987632 23567999998764

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=98.16  E-value=1.8e-06  Score=67.49  Aligned_cols=119  Identities=10%  Similarity=0.025  Sum_probs=75.3

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC-CCccEEEEecccccCCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD-SEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      +.+..+||++||...+..           ..+...|+.+|.+.+.+.+.++.++ +.+.+++++||.+.++.        
T Consensus       122 ~~~~g~iv~isS~~~~~~-----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~--------  182 (264)
T 2dtx_A          122 RSRDPSIVNISSVQASII-----------TKNASAYVTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPL--------  182 (264)
T ss_dssp             TSSSCEEEEECCGGGTSC-----------CTTBHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHH--------
T ss_pred             HcCCcEEEEECCchhccC-----------CCCchhHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcc--------
Confidence            346679999999877642           1235689999999999999998776 22899999999988751        


Q ss_pred             CCCCCCChHHHHHHHHhCCCC-----eeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           82 PRGIPNNLMPFVTQVAVGRRP-----ELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                              ...+.....+...     ....+.      .....+.+++.+|+|++++.++.... ....|+.+++.++.
T Consensus       183 --------~~~~~~~~~~~~~~~~~~~~~~~~------~~~p~~~~~~p~dvA~~v~~l~s~~~-~~~tG~~i~vdGG~  246 (264)
T 2dtx_A          183 --------VRKAAELEVGSDPMRIEKKISEWG------HEHPMQRIGKPQEVASAVAFLASREA-SFITGTCLYVDGGL  246 (264)
T ss_dssp             --------HHHHHHHHHCSCHHHHHHHHHHHH------HHSTTSSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTG
T ss_pred             --------hhhhhhcccccCchhhHHHHHHHH------hcCCCCCCcCHHHHHHHHHHHhCchh-cCCCCcEEEECCCc
Confidence                    0000000000000     000000      01112347899999999999987632 23567899888764

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=98.16  E-value=1.1e-05  Score=61.98  Aligned_cols=113  Identities=7%  Similarity=-0.091  Sum_probs=76.9

Q ss_pred             CCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCC
Q 028478            5 GCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDP   82 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~   82 (208)
                      +..++|++||...+..           ..+...|+.+|.+.+.+.+.++.++  .++.+.+++||.+.++...       
T Consensus       132 ~~g~iv~isS~~~~~~-----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~-------  193 (247)
T 3lyl_A          132 RWGRIISIGSVVGSAG-----------NPGQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTD-------  193 (247)
T ss_dssp             TCEEEEEECCTHHHHC-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTT-------
T ss_pred             CCeEEEEEcchhhccC-----------CCCcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccch-------
Confidence            4458999999776532           1235689999999998888877642  2799999999999886321       


Q ss_pred             CCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCc
Q 028478           83 RGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGT  157 (208)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~  157 (208)
                           .+...........                ...+.+.+.+|+|+++..++.... ....|+.+++.+|..+
T Consensus       194 -----~~~~~~~~~~~~~----------------~~~~~~~~~~dva~~i~~l~s~~~-~~~tG~~i~vdgG~~~  246 (247)
T 3lyl_A          194 -----KLTDEQKSFIATK----------------IPSGQIGEPKDIAAAVAFLASEEA-KYITGQTLHVNGGMYM  246 (247)
T ss_dssp             -----TSCHHHHHHHHTT----------------STTCCCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTSSC
T ss_pred             -----hccHHHHHHHhhc----------------CCCCCCcCHHHHHHHHHHHhCCCc-CCccCCEEEECCCEec
Confidence                 1111122222221                223457899999999999987632 2356799999887654

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=98.16  E-value=1.4e-05  Score=62.01  Aligned_cols=111  Identities=10%  Similarity=-0.029  Sum_probs=73.7

Q ss_pred             CCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhc---CCCccEEEEecccccCCCCCCCCCCC
Q 028478            5 GCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRS---DSEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      +..+||++||...+...           .+...|+.+|.+.+.+.+.++.+   + ++.+.+++||.|.++....     
T Consensus       141 ~~g~iv~isS~~~~~~~-----------~~~~~Y~asKaa~~~~~~~la~e~~~~-gi~vn~v~PG~v~t~~~~~-----  203 (257)
T 3tpc_A          141 ERGVIVNTASIAAFDGQ-----------IGQAAYAASKGGVAALTLPAARELARF-GIRVVTIAPGIFDTPMMAG-----  203 (257)
T ss_dssp             CCEEEEEECCTHHHHCC-----------TTCHHHHHHHHHHHHHHHHHHHHHGGG-TEEEEEEEECCBSCC---------
T ss_pred             CCeEEEEEechhhccCC-----------CCCcchHHHHHHHHHHHHHHHHHHHHc-CeEEEEEEeCCCCChhhcc-----
Confidence            34579999998776321           23568999999999998888765   4 8999999999999863110     


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcce-eeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcC
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGV-RDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTS  158 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s  158 (208)
                             +..........                .... ..+...+|+|+++..++..   ....|+.+++.+|..++
T Consensus       204 -------~~~~~~~~~~~----------------~~p~~~r~~~~~dva~~v~~l~s~---~~itG~~i~vdGG~~~~  255 (257)
T 3tpc_A          204 -------MPQDVQDALAA----------------SVPFPPRLGRAEEYAALVKHICEN---TMLNGEVIRLDGALRMA  255 (257)
T ss_dssp             -----------------C----------------CSSSSCSCBCHHHHHHHHHHHHHC---TTCCSCEEEESTTCCC-
T ss_pred             -------CCHHHHHHHHh----------------cCCCCCCCCCHHHHHHHHHHHccc---CCcCCcEEEECCCccCC
Confidence                   00001111111                1111 3478999999999999975   24667999998877554

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=98.16  E-value=4.4e-06  Score=64.70  Aligned_cols=117  Identities=8%  Similarity=-0.004  Sum_probs=74.7

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC----CCccEEEEecccccCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD----SEWKIILLRYFNPVGAHPSGKI   78 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~iiR~~~i~G~~~~~~~   78 (208)
                      +.+ .+||++||...+..           ..+...|+.+|.+.+.+.+.++.+.    ++++++++||+.++++..... 
T Consensus       128 ~~~-g~iv~isS~~~~~~-----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~-  194 (253)
T 1hxh_A          128 ETG-GSIINMASVSSWLP-----------IEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQAS-  194 (253)
T ss_dssp             TTC-EEEEEECCGGGTSC-----------CTTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHH-
T ss_pred             HcC-CEEEEEcchhhcCC-----------CCCCccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhc-
Confidence            445 79999999877642           1234689999999999998887653    169999999999998621000 


Q ss_pred             CCCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           79 GEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                        ...    .   ..........             .......+.+.+|+|++++.++..+. ....|+.+++.+|.
T Consensus       195 --~~~----~---~~~~~~~~~~-------------~~~p~~~~~~~~dvA~~~~~l~s~~~-~~~tG~~~~vdgG~  248 (253)
T 1hxh_A          195 --LPK----G---VSKEMVLHDP-------------KLNRAGRAYMPERIAQLVLFLASDES-SVMSGSELHADNSI  248 (253)
T ss_dssp             --SCT----T---CCHHHHBCBT-------------TTBTTCCEECHHHHHHHHHHHHSGGG-TTCCSCEEEESSSC
T ss_pred             --cch----h---hhHHHHhhhh-------------ccCccCCCCCHHHHHHHHHHHcCccc-cCCCCcEEEECCCc
Confidence              000    0   0000011100             01112347899999999999987632 23557899988765

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=98.15  E-value=1.2e-06  Score=68.72  Aligned_cols=123  Identities=10%  Similarity=-0.032  Sum_probs=77.8

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC-CCccEEEEecccccCCCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD-SEWKIILLRYFNPVGAHPSGKIGEDP   82 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~iiR~~~i~G~~~~~~~~~~~   82 (208)
                      .+..+||++||...+..           ......|+.+|.+.+.+.+.++.++ +++.+.+++||.|.++......... 
T Consensus       130 ~~~g~iv~isS~~~~~~-----------~~~~~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~-  197 (269)
T 3vtz_A          130 IGHGSIINIASVQSYAA-----------TKNAAAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKME-  197 (269)
T ss_dssp             HTCEEEEEECCGGGTSB-----------CTTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHH-
T ss_pred             cCCCEEEEECchhhccC-----------CCCChhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhcc-
Confidence            35568999999887742           1235689999999999999988775 5799999999999885200000000 


Q ss_pred             CCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           83 RGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        83 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                      ......... .......                 ....+.+.+.+|+|++++.++.... ....|+++++.+|..
T Consensus       198 ~~~~~~~~~~~~~~~~~-----------------~~p~~r~~~pedvA~~v~~L~s~~~-~~itG~~i~vdGG~~  254 (269)
T 3vtz_A          198 VGEDENAVERKIEEWGR-----------------QHPMGRIGRPEEVAEVVAFLASDRS-SFITGACLTVDGGLL  254 (269)
T ss_dssp             HCCSTTHHHHHHHHHHH-----------------HSTTSSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTGG
T ss_pred             ccccchhhHHHHHHHHh-----------------cCCCCCCcCHHHHHHHHHHHhCCcc-CCCcCcEEEECCCcc
Confidence            000000001 1111111                 1122347899999999999987632 235679999987753

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=98.15  E-value=1.6e-06  Score=67.49  Aligned_cols=120  Identities=13%  Similarity=-0.048  Sum_probs=76.5

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      +.+..+||++||...+..           ..+...|+.+|.+.|.+.+.++.++  .++.+++++||.+.++.....   
T Consensus       135 ~~~~g~iv~isS~~~~~~-----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---  200 (260)
T 2ae2_A          135 ASERGNVVFISSVSGALA-----------VPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMT---  200 (260)
T ss_dssp             HTSSEEEEEECCGGGTSC-----------CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHH---
T ss_pred             hcCCcEEEEEcchhhccC-----------CCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhh---
Confidence            346679999999876632           1235689999999999999887654  279999999999987520000   


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCc
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGT  157 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~  157 (208)
                      ...   ......+......                 ...+.+.+.+|+|++++.++... .....|+.+++.+|...
T Consensus       201 ~~~---~~~~~~~~~~~~~-----------------~~~~~~~~~~dvA~~v~~l~s~~-~~~~tG~~~~vdgG~~~  256 (260)
T 2ae2_A          201 IQD---PEQKENLNKLIDR-----------------CALRRMGEPKELAAMVAFLCFPA-ASYVTGQIIYVDGGLMA  256 (260)
T ss_dssp             TTS---HHHHHHHHHHHHT-----------------STTCSCBCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTGGG
T ss_pred             ccC---hhhHHHHHHHHhc-----------------CCCCCCCCHHHHHHHHHHHcCcc-ccCCCCCEEEECCCccc
Confidence            000   0000001111111                 11234789999999999998753 22356789999877543

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=98.15  E-value=3.6e-06  Score=65.02  Aligned_cols=111  Identities=11%  Similarity=0.088  Sum_probs=75.0

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      .++|++||...+..          +..+...|+.+|.+.|.+++.++.+.  .++.++++||+.++++....        
T Consensus       143 ~~iv~~sS~~~~~~----------~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~--------  204 (258)
T 3afn_B          143 SAVISTGSIAGHTG----------GGPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHAD--------  204 (258)
T ss_dssp             EEEEEECCTHHHHC----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTT--------
T ss_pred             cEEEEecchhhccC----------CCCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccc--------
Confidence            58999999776531          12245689999999999998876542  27999999999999973210        


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                         ..-.+......+.                 ..+.+++++|+|++++.++.........++.|++.++.
T Consensus       205 ---~~~~~~~~~~~~~-----------------~~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gg~  255 (258)
T 3afn_B          205 ---KTQDVRDRISNGI-----------------PMGRFGTAEEMAPAFLFFASHLASGYITGQVLDINGGQ  255 (258)
T ss_dssp             ---CCHHHHHHHHTTC-----------------TTCSCBCGGGTHHHHHHHHCHHHHTTCCSEEEEESTTS
T ss_pred             ---cCHHHHHHHhccC-----------------CCCcCCCHHHHHHHHHHHhCcchhccccCCEEeECCCc
Confidence               0011222332221                 12357899999999999997632102356899998775

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=98.14  E-value=7.8e-06  Score=63.55  Aligned_cols=117  Identities=8%  Similarity=-0.055  Sum_probs=76.9

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhc---CCCccEEEEecccccCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRS---DSEWKIILLRYFNPVGAHPSGKIG   79 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~iiR~~~i~G~~~~~~~~   79 (208)
                      +.+..++|++||...++..         +..+...|+.+|.+.+.+.+.++.+   + ++.+.+++||.++++...    
T Consensus       135 ~~~~g~iv~iss~~~~~~~---------~~~~~~~Y~asKaa~~~~~~~la~e~~~~-gi~v~~v~PG~v~t~~~~----  200 (264)
T 3i4f_A          135 KQNFGRIINYGFQGADSAP---------GWIYRSAFAAAKVGLVSLTKTVAYEEAEY-GITANMVCPGDIIGEMKE----  200 (264)
T ss_dssp             HHTCEEEEEECCTTGGGCC---------CCTTCHHHHHHHHHHHHHHHHHHHHHGGG-TEEEEEEEECCCCGGGGS----
T ss_pred             hcCCCeEEEEeechhcccC---------CCCCCchhHHHHHHHHHHHHHHHHHhhhc-CcEEEEEccCCccCccch----
Confidence            3455689999987555311         1224568999999999999888765   4 799999999999986311    


Q ss_pred             CCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcC
Q 028478           80 EDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTS  158 (208)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s  158 (208)
                              ............                ......+.+.+|+|++++.++.... ....|+++++.+|....
T Consensus       201 --------~~~~~~~~~~~~----------------~~p~~r~~~~~dva~~v~~l~s~~~-~~itG~~i~vdGG~~~~  254 (264)
T 3i4f_A          201 --------ATIQEARQLKEH----------------NTPIGRSGTGEDIARTISFLCEDDS-DMITGTIIEVTGAVDVI  254 (264)
T ss_dssp             --------CCHHHHHHC------------------------CCCCHHHHHHHHHHHHSGGG-TTCCSCEEEESCSCCCC
T ss_pred             --------hccHHHHHHHhh----------------cCCCCCCcCHHHHHHHHHHHcCccc-CCCCCcEEEEcCceeec
Confidence                    111211111111                1112346889999999999998632 23567999998876543

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=98.14  E-value=1.5e-05  Score=62.15  Aligned_cols=112  Identities=9%  Similarity=-0.071  Sum_probs=74.3

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC-CCccEEEEecccccCCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD-SEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      +.+..+||++||...+..           ..+...|+.+|.+.+.+.+.++.++ +++.+.+++||.+..+...      
T Consensus       146 ~~~~g~iv~isS~~~~~~-----------~~~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~------  208 (260)
T 3gem_A          146 ASEVADIVHISDDVTRKG-----------SSKHIAYCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKD------  208 (260)
T ss_dssp             TSSSCEEEEECCGGGGTC-----------CSSCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC----------
T ss_pred             hcCCcEEEEECChhhcCC-----------CCCcHhHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCC------
Confidence            345568999999876632           1235689999999999999998776 4699999999999875210      


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcC
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTS  158 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s  158 (208)
                      ..       ..........  +               ..-+...+|+|++++.++..   ....|+++++.+|..++
T Consensus       209 ~~-------~~~~~~~~~~--p---------------~~r~~~~edva~~v~~L~~~---~~itG~~i~vdGG~~~~  258 (260)
T 3gem_A          209 DA-------AYRANALAKS--A---------------LGIEPGAEVIYQSLRYLLDS---TYVTGTTLTVNGGRHVK  258 (260)
T ss_dssp             ------------------C--C---------------SCCCCCTHHHHHHHHHHHHC---SSCCSCEEEESTTTTTC
T ss_pred             CH-------HHHHHHHhcC--C---------------CCCCCCHHHHHHHHHHHhhC---CCCCCCEEEECCCcccC
Confidence            00       0111111111  1               12245689999999999854   24667999999887654

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=98.13  E-value=4.6e-06  Score=64.84  Aligned_cols=123  Identities=8%  Similarity=-0.021  Sum_probs=73.0

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      .+..+||++||...+..           ..+...|+.+|.+.+.+.+.++.++  .++.+++++||.+.++......   
T Consensus       132 ~~~g~iv~isS~~~~~~-----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---  197 (260)
T 1x1t_A          132 QGFGRIINIASAHGLVA-----------SANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQI---  197 (260)
T ss_dssp             HTCEEEEEECCGGGTSC-----------CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC----------
T ss_pred             cCCCEEEEECcHHhCcC-----------CCCCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhh---
Confidence            45679999999877642           1235689999999999998877653  2799999999999987321100   


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEE-ccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVF-GTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                           ..   ..............-+ .      .......+.+.+|+|++++.++... .....|+.+++.+|.
T Consensus       198 -----~~---~~~~~~~~~~~~~~~~~~------~~~p~~~~~~p~dva~~~~~l~s~~-~~~~tG~~~~vdgG~  257 (260)
T 1x1t_A          198 -----SA---LAEKNGVDQETAARELLS------EKQPSLQFVTPEQLGGTAVFLASDA-AAQITGTTVSVDGGW  257 (260)
T ss_dssp             -------------------------CHH------HHCTTCCCBCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTG
T ss_pred             -----hh---hccccCCchHHHHHHHhh------ccCCCCCCcCHHHHHHHHHHHhChh-hcCCCCCEEEECCCc
Confidence                 00   0000000000000000 0      0011235789999999999998763 223567899998764

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=98.13  E-value=1.2e-05  Score=62.28  Aligned_cols=117  Identities=13%  Similarity=0.072  Sum_probs=69.4

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      .++|++||...+..           ......|+.+|.+.+.+.+.++.++  .++.+..++|+.+.++......+..   
T Consensus       140 ~~iv~isS~~~~~~-----------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~---  205 (261)
T 3n74_A          140 CVILNVASTGAGRP-----------RPNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGED---  205 (261)
T ss_dssp             EEEEEECCTTTTSC-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-----------------
T ss_pred             eEEEEeCchhhcCC-----------CCCccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccC---
Confidence            37999999766532           2235679999999999998887653  1799999999999886321110000   


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCH
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSV  159 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~  159 (208)
                           ....          ...+.      .......+++.+|+|++++.++... .....|+++++.+|..++.
T Consensus       206 -----~~~~----------~~~~~------~~~~~~~~~~~~dva~~~~~l~s~~-~~~itG~~i~vdgG~~~~~  258 (261)
T 3n74_A          206 -----SEEI----------RKKFR------DSIPMGRLLKPDDLAEAAAFLCSPQ-ASMITGVALDVDGGRSIGG  258 (261)
T ss_dssp             --------------------------------CTTSSCCCHHHHHHHHHHHTSGG-GTTCCSCEEEESTTTTC--
T ss_pred             -----cHHH----------HHHHh------hcCCcCCCcCHHHHHHHHHHHcCCc-ccCcCCcEEEecCCcccCC
Confidence                 0000          00111      1222345889999999999998653 2346779999998876654

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=98.11  E-value=8.5e-07  Score=69.74  Aligned_cols=115  Identities=11%  Similarity=0.036  Sum_probs=77.1

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhc---CCCccEEEEecccccCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRS---DSEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      .+..+||++||...+..           ..+...|+.+|.+.+.+.+.++.+   + ++.+.+++||.|.++.....   
T Consensus       155 ~~~g~IV~isS~~~~~~-----------~~~~~~Y~asKaa~~~l~~~la~e~~~~-gI~vn~v~PG~v~T~~~~~~---  219 (273)
T 3uf0_A          155 HGSGRIVTIASMLSFQG-----------GRNVAAYAASKHAVVGLTRALASEWAGR-GVGVNALAPGYVVTANTAAL---  219 (273)
T ss_dssp             HTCEEEEEECCGGGTSC-----------CSSCHHHHHHHHHHHHHHHHHHHHHGGG-TEEEEEEEECSBCSGGGHHH---
T ss_pred             cCCCEEEEEcchHhcCC-----------CCCChhHHHHHHHHHHHHHHHHHHHhhc-CcEEEEEEeCCCcCCchhhc---
Confidence            45568999999877632           123568999999999999988776   4 79999999999998631000   


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCc
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGT  157 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~  157 (208)
                         .  . ............                 ....+...+|+|++++.++... .....|+++++.+|...
T Consensus       220 ---~--~-~~~~~~~~~~~~-----------------p~~r~~~pedva~~v~~L~s~~-a~~itG~~i~vdGG~~~  272 (273)
T 3uf0_A          220 ---R--A-DDERAAEITARI-----------------PAGRWATPEDMVGPAVFLASDA-ASYVHGQVLAVDGGWLA  272 (273)
T ss_dssp             ---H--T-SHHHHHHHHHHS-----------------TTSSCBCGGGGHHHHHHHHSGG-GTTCCSCEEEESTTGGG
T ss_pred             ---c--c-CHHHHHHHHhcC-----------------CCCCCCCHHHHHHHHHHHhCch-hcCCcCCEEEECcCccC
Confidence               0  0 001112222211                 1224678999999999998763 22456799999887644

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=98.11  E-value=8.1e-06  Score=63.64  Aligned_cols=120  Identities=11%  Similarity=0.045  Sum_probs=75.3

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      .++|++||...+..           ..+...|+.+|.+.+.+.+.++.++  .++.+..++||.|+++.....+... ..
T Consensus       140 g~iv~isS~~~~~~-----------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~-~~  207 (264)
T 3ucx_A          140 GAVVNVNSMVVRHS-----------QAKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQ-AG  207 (264)
T ss_dssp             CEEEEECCGGGGCC-----------CTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHH-HH
T ss_pred             CEEEEECcchhccC-----------CCccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhh-hh
Confidence            48999999876632           1234689999999999999887762  2899999999999986210000000 00


Q ss_pred             CCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           85 IPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        85 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                      ....... +.....                 +....+.+.+.+|+|++++.++... .....|+++++.+|..
T Consensus       208 ~~~~~~~~~~~~~~-----------------~~~p~~r~~~p~dvA~~v~~L~s~~-~~~itG~~i~vdGG~~  262 (264)
T 3ucx_A          208 KYGTSVEDIYNAAA-----------------AGSDLKRLPTEDEVASAILFMASDL-ASGITGQALDVNCGEY  262 (264)
T ss_dssp             HTTCCHHHHHHHHH-----------------TTSSSSSCCBHHHHHHHHHHHHSGG-GTTCCSCEEEESTTSS
T ss_pred             hcCCCHHHHHHHHh-----------------ccCCcccCCCHHHHHHHHHHHcCcc-ccCCCCCEEEECCCcc
Confidence            0000000 111111                 1222345789999999999998763 2246679999988764

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=98.11  E-value=7.1e-06  Score=63.87  Aligned_cols=108  Identities=7%  Similarity=-0.008  Sum_probs=75.3

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhc---CCCccEEEEecccccCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRS---DSEWKIILLRYFNPVGAHPSGKIG   79 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~iiR~~~i~G~~~~~~~~   79 (208)
                      +.+..++|++||...+...           .+...|+.+|.+.+.+.+.++.+   + ++.++++|||.++++...  . 
T Consensus       129 ~~~~g~iv~isS~~~~~~~-----------~~~~~Y~~sK~a~~~~~~~la~e~~~~-gi~v~~v~Pg~v~t~~~~--~-  193 (260)
T 1nff_A          129 EAGRGSIINISSIEGLAGT-----------VACHGYTATKFAVRGLTKSTALELGPS-GIRVNSIHPGLVKTPMTD--W-  193 (260)
T ss_dssp             HHTCEEEEEECCGGGTSCC-----------TTBHHHHHHHHHHHHHHHHHHHHHGGG-TEEEEEEEECCBCSGGGT--T-
T ss_pred             hcCCCEEEEEeehhhcCCC-----------CCchhHHHHHHHHHHHHHHHHHHhCcc-CcEEEEEEeCCCCCCccc--c-
Confidence            3456799999998776421           23468999999999999888765   4 899999999999997311  0 


Q ss_pred             CCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           80 EDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                         .               ..  .+.  .      .+  ...+.+.+|+|++++.++.... ....++.|++.+|..
T Consensus       194 ---~---------------~~--~~~--~------~~--~~~~~~~~dvA~~v~~l~s~~~-~~~~G~~~~v~gG~~  239 (260)
T 1nff_A          194 ---V---------------PE--DIF--Q------TA--LGRAAEPVEVSNLVVYLASDES-SYSTGAEFVVDGGTV  239 (260)
T ss_dssp             ---S---------------CT--TCS--C------CS--SSSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTGG
T ss_pred             ---c---------------hh--hHH--h------Cc--cCCCCCHHHHHHHHHHHhCccc-cCCcCCEEEECCCee
Confidence               0               00  000  0      01  1246889999999999987632 234578999987754

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=98.10  E-value=1.1e-05  Score=63.21  Aligned_cols=113  Identities=10%  Similarity=-0.041  Sum_probs=76.8

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      .+..+||++||...+...           .....|+.+|.+.+.+.+.++.++  .++.+.+++||.|.++...      
T Consensus       155 ~~~g~iv~isS~~~~~~~-----------~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~------  217 (269)
T 4dmm_A          155 QRSGRIINIASVVGEMGN-----------PGQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTS------  217 (269)
T ss_dssp             HTCCEEEEECCHHHHHCC-----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSC------
T ss_pred             cCCcEEEEECchhhcCCC-----------CCchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccc------
Confidence            345689999997665321           235689999999998888877642  1799999999999986311      


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcC
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTS  158 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s  158 (208)
                               ..........                .....+.+.+|+|++++.++..+......|+++++.+|..++
T Consensus       218 ---------~~~~~~~~~~----------------~p~~r~~~~~dvA~~v~~l~s~~~~~~itG~~i~vdGG~~~s  269 (269)
T 4dmm_A          218 ---------ELAAEKLLEV----------------IPLGRYGEAAEVAGVVRFLAADPAAAYITGQVINIDGGLVMA  269 (269)
T ss_dssp             ---------HHHHHHHGGG----------------CTTSSCBCHHHHHHHHHHHHHCGGGGGCCSCEEEESTTSCCC
T ss_pred             ---------cccHHHHHhc----------------CCCCCCCCHHHHHHHHHHHhCCcccCCCcCCEEEECCCeecC
Confidence                     0111111111                112346789999999999998743334567999998886543

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=98.10  E-value=9.1e-06  Score=64.04  Aligned_cols=112  Identities=7%  Similarity=-0.056  Sum_probs=73.5

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      +.+..+||++||...+...           .+...|+.+|.+.+.+.+.++.+.  .++.++++||+.+.++...     
T Consensus       169 ~~~~~~iv~isS~~~~~~~-----------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-----  232 (285)
T 2c07_A          169 NNRYGRIINISSIVGLTGN-----------VGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTD-----  232 (285)
T ss_dssp             HHTCEEEEEECCTHHHHCC-----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC---------
T ss_pred             hCCCCEEEEECChhhccCC-----------CCCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchh-----
Confidence            3456799999998655321           235689999999999988876542  2799999999999886311     


Q ss_pred             CCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           81 DPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        81 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                         .    +.. .........  +               ...+++.+|+|++++.++..+. ....|+.+++.+|.
T Consensus       233 ---~----~~~~~~~~~~~~~--~---------------~~~~~~~~dvA~~~~~l~~~~~-~~~~G~~i~v~gG~  283 (285)
T 2c07_A          233 ---K----ISEQIKKNIISNI--P---------------AGRMGTPEEVANLACFLSSDKS-GYINGRVFVIDGGL  283 (285)
T ss_dssp             --------CCHHHHHHHHTTC--T---------------TSSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTS
T ss_pred             ---h----cCHHHHHHHHhhC--C---------------CCCCCCHHHHHHHHHHHhCCCc-CCCCCCEEEeCCCc
Confidence               0    111 222222111  1               1237899999999999987632 22456899998765

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=98.09  E-value=1.9e-05  Score=59.93  Aligned_cols=111  Identities=9%  Similarity=-0.006  Sum_probs=76.1

Q ss_pred             EEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCCCCCCCCC
Q 028478            8 NLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGEDPRGIPN   87 (208)
Q Consensus         8 ~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~~~~~~~~   87 (208)
                      ++|++||...+..           ..+...|+.+|.+.+.+.+.++.++..+.+..++||.+.++....        ...
T Consensus       111 ~iv~~sS~~~~~~-----------~~~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~--------~~~  171 (223)
T 3uce_A          111 SITLTSGMLSRKV-----------VANTYVKAAINAAIEATTKVLAKELAPIRVNAISPGLTKTEAYKG--------MNA  171 (223)
T ss_dssp             EEEEECCGGGTSC-----------CTTCHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEECSBCSGGGTT--------SCH
T ss_pred             EEEEecchhhccC-----------CCCchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcchhhhh--------cch
Confidence            7999999877642           223568999999999999999888723999999999999863210        001


Q ss_pred             ChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCc
Q 028478           88 NLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGT  157 (208)
Q Consensus        88 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~  157 (208)
                      .... +........                 ....+.+.+|+|++++.++..   ....|+++++.+|..+
T Consensus       172 ~~~~~~~~~~~~~~-----------------~~~~~~~~~dvA~~~~~l~~~---~~~tG~~i~vdgG~~~  222 (223)
T 3uce_A          172 DDRDAMYQRTQSHL-----------------PVGKVGEASDIAMAYLFAIQN---SYMTGTVIDVDGGALL  222 (223)
T ss_dssp             HHHHHHHHHHHHHS-----------------TTCSCBCHHHHHHHHHHHHHC---TTCCSCEEEESTTGGG
T ss_pred             hhHHHHHHHHhhcC-----------------CCCCccCHHHHHHHHHHHccC---CCCCCcEEEecCCeec
Confidence            1111 222222211                 123467899999999999975   2456799999887644

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=98.09  E-value=1e-05  Score=62.27  Aligned_cols=99  Identities=9%  Similarity=0.078  Sum_probs=59.7

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      .++|++||...+..           ..+...|+.+|.+.+.+.+.++.++  .++.+.+++||.+.++..          
T Consensus       126 g~iv~isS~~~~~~-----------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~----------  184 (245)
T 3e9n_A          126 GCVIYINSGAGNGP-----------HPGNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPML----------  184 (245)
T ss_dssp             CEEEEEC---------------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC---------------
T ss_pred             CeEEEEcCcccccC-----------CCCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchh----------
Confidence            48999999877642           1235689999999999999887652  279999999999988621          


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEec
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLG  152 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~  152 (208)
                               .......       +      .......+++.+|+|++++.++..    ...+.++|+.
T Consensus       185 ---------~~~~~~~-------~------~~~~~~~~~~p~dvA~~i~~l~~~----~~~~~~~~i~  226 (245)
T 3e9n_A          185 ---------QGLMDSQ-------G------TNFRPEIYIEPKEIANAIRFVIDA----GETTQITNVD  226 (245)
T ss_dssp             ---------------------------------CCGGGSCHHHHHHHHHHHHTS----CTTEEEEEEE
T ss_pred             ---------hhhhhhh-------h------cccccccCCCHHHHHHHHHHHHcC----CCccceeeeE
Confidence                     1111100       0      011123478999999999999988    3445777764

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=98.08  E-value=1.7e-05  Score=61.58  Aligned_cols=113  Identities=13%  Similarity=-0.017  Sum_probs=71.5

Q ss_pred             EEEEecccccc-CCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC-CCccEEEEecccccCCCCCCCCCCCCCCC
Q 028478            8 NLVFSSSATVY-GWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD-SEWKIILLRYFNPVGAHPSGKIGEDPRGI   85 (208)
Q Consensus         8 ~~i~~SS~~vy-g~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~iiR~~~i~G~~~~~~~~~~~~~~   85 (208)
                      ++|++||...+ ..           ..+...|+.+|.+.+.+.+.++.++ +.+.+..+.||.+..+.....        
T Consensus       138 ~iv~isS~~~~~~~-----------~~~~~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~--------  198 (259)
T 3edm_A          138 AIVTFSSQAGRDGG-----------GPGALAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTF--------  198 (259)
T ss_dssp             EEEEECCHHHHHCC-----------STTCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC--------------
T ss_pred             EEEEEcCHHhccCC-----------CCCcHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccccc--------
Confidence            79999998776 21           1235689999999999999988775 458999999999987631100        


Q ss_pred             CCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCH
Q 028478           86 PNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSV  159 (208)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~  159 (208)
                         ..+.....          +.      .....+.+.+.+|+|++++.++... .....|+.+++.+|.....
T Consensus       199 ---~~~~~~~~----------~~------~~~p~~r~~~pedva~~v~~L~s~~-~~~itG~~i~vdGg~~~~~  252 (259)
T 3edm_A          199 ---TKPEVRER----------VA------GATSLKREGSSEDVAGLVAFLASDD-AAYVTGACYDINGGVLFSE  252 (259)
T ss_dssp             -----------------------------------CCBCHHHHHHHHHHHHSGG-GTTCCSCEEEESBCSSBC-
T ss_pred             ---cChHHHHH----------HH------hcCCCCCCcCHHHHHHHHHHHcCcc-ccCccCCEEEECCCcCCCC
Confidence               00000000          00      1122345778999999999998763 2235679999988765443

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=98.08  E-value=7.7e-06  Score=65.00  Aligned_cols=133  Identities=10%  Similarity=-0.049  Sum_probs=81.6

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhc---CCCccEEEEecccccCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRS---DSEWKIILLRYFNPVGAHPSGKIGEDPR   83 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~iiR~~~i~G~~~~~~~~~~~~   83 (208)
                      .+||++||...+...          ..+...|+.+|.+.+.+.+.++.+   + ++.+++++||.+.++....      .
T Consensus       159 g~IV~isS~~~~~~~----------~~~~~~Y~asKaa~~~l~~~la~el~~~-gI~v~~v~PG~v~T~~~~~------~  221 (297)
T 1xhl_A          159 GEIVNVSSIVAGPQA----------HSGYPYYACAKAALDQYTRCTAIDLIQH-GVRVNSVSPGAVATGFMGA------M  221 (297)
T ss_dssp             CEEEEECCGGGSSSC----------CTTSHHHHHHHHHHHHHHHHHHHHHGGG-TCEEEEEEECCBCSSHHHH------T
T ss_pred             CEEEEEcCchhccCC----------CCCcchHHHHHHHHHHHHHHHHHHhccc-CeEEEEEeeCCCcCccccc------c
Confidence            699999998776421          023468999999999999887753   4 8999999999999862100      0


Q ss_pred             CCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHHHHH
Q 028478           84 GIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMV  163 (208)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~  163 (208)
                      ......-.-........       .      .......+...+|+|++++.++.........|+.+++.+|......+.+
T Consensus       222 ~~~~~~~~~~~~~~~~~-------~------~~~p~~r~~~pedvA~~v~~l~s~~~~~~itG~~i~vdGG~~~~~~~~~  288 (297)
T 1xhl_A          222 GLPETASDKLYSFIGSR-------K------ECIPVGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTLVMGMQT  288 (297)
T ss_dssp             TCCHHHHHHHHHHHHHC-------T------TTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCCGGGG
T ss_pred             ccccccccchHHHHHHH-------H------hcCCCCCCcCHHHHHHHHHHHhCCcccCCccCcEEEECCCccccccccc
Confidence            00000000000000000       0      0111234789999999999998763012356799999888766666655


Q ss_pred             HHHHHH
Q 028478          164 AAFEKA  169 (208)
Q Consensus       164 ~~i~~~  169 (208)
                      ..+.+.
T Consensus       289 ~~~~~~  294 (297)
T 1xhl_A          289 HDLMSV  294 (297)
T ss_dssp             SCHHHH
T ss_pred             cchhhh
Confidence            555544

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=98.07  E-value=2.1e-06  Score=67.50  Aligned_cols=119  Identities=8%  Similarity=0.007  Sum_probs=73.8

Q ss_pred             CCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCC
Q 028478            5 GCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDP   82 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~   82 (208)
                      +..+||++||...+..           ..+...|+.+|.+.+.+.+.++.+.  .++.+++++||.+.++..        
T Consensus       151 ~~g~iv~isS~~~~~~-----------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~--------  211 (277)
T 2rhc_B          151 GTGRIVNIASTGGKQG-----------VVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMA--------  211 (277)
T ss_dssp             TEEEEEEECCGGGTSC-----------CTTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHH--------
T ss_pred             CCeEEEEECccccccC-----------CCCCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchh--------
Confidence            4568999999765531           1235689999999999999887653  279999999999988520        


Q ss_pred             CCCCCChHHHHHHHHh---CCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           83 RGIPNNLMPFVTQVAV---GRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        83 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                          ..+.........   ..  ....+.      .....+.+++.+|+|++++.++..+. ....|+++++.+|.
T Consensus       212 ----~~~~~~~~~~~~~~~~~--~~~~~~------~~~p~~r~~~~~dvA~~v~~l~s~~~-~~~tG~~~~vdGG~  274 (277)
T 2rhc_B          212 ----ASVREHYSDIWEVSTEE--AFDRIT------ARVPIGRYVQPSEVAEMVAYLIGPGA-AAVTAQALNVCGGL  274 (277)
T ss_dssp             ----HHHHHHHHHHHTCCHHH--HHHHHH------HHSTTSSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTC
T ss_pred             ----hhhhhhcccccccchHH--HHHHHH------hcCCCCCCcCHHHHHHHHHHHhCchh-cCCCCcEEEECCCc
Confidence                000000000000   00  000000      01112358899999999999987632 23567899998774

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=98.06  E-value=1.8e-05  Score=61.33  Aligned_cols=119  Identities=12%  Similarity=0.014  Sum_probs=78.3

Q ss_pred             EEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCCC
Q 028478            8 NLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRGI   85 (208)
Q Consensus         8 ~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~~   85 (208)
                      +||++||...+..           ..+...|+.+|.+.+.+.+.++.++  .++.+..++||.+.++....      ...
T Consensus       133 ~iv~isS~~~~~~-----------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~------~~~  195 (255)
T 4eso_A          133 SIVFTSSVADEGG-----------HPGMSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGV------AGI  195 (255)
T ss_dssp             EEEEECCGGGSSB-----------CTTBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTC------TTS
T ss_pred             EEEEECChhhcCC-----------CCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCccccc------ccC
Confidence            7999999876642           1235689999999999999887764  27999999999999873210      010


Q ss_pred             CCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHHH
Q 028478           86 PNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLE  161 (208)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e  161 (208)
                      .......+.......                ...+.+...+|+|++++.++..  .....|+++++.+|...++.+
T Consensus       196 ~~~~~~~~~~~~~~~----------------~p~~r~~~pedvA~~v~~L~s~--~~~itG~~i~vdGG~~~~l~~  253 (255)
T 4eso_A          196 TEAERAEFKTLGDNI----------------TPMKRNGTADEVARAVLFLAFE--ATFTTGAKLAVDGGLGQKLST  253 (255)
T ss_dssp             CHHHHHHHHHHHHHH----------------STTSSCBCHHHHHHHHHHHHHT--CTTCCSCEEEESTTTTTTBCC
T ss_pred             ChhhHHHHHHHHhcc----------------CCCCCCcCHHHHHHHHHHHcCc--CcCccCCEEEECCCccccCcC
Confidence            111111111111111                1122367899999999998875  334678999999887766543

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=98.06  E-value=9.1e-06  Score=63.57  Aligned_cols=112  Identities=9%  Similarity=-0.056  Sum_probs=74.3

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      .+..++|++||...+..           ..+...|+.+|.+.+.+.+.++.+.  .++.+..++||.+..+....     
T Consensus       156 ~~~g~iv~isS~~~~~~-----------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~-----  219 (271)
T 4iin_A          156 SRFGSVVNVASIIGERG-----------NMGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNAN-----  219 (271)
T ss_dssp             HTCEEEEEECCHHHHHC-----------CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC---------
T ss_pred             cCCCEEEEEechhhcCC-----------CCCchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhh-----
Confidence            34568999999766532           1245789999999999999887762  28999999999998763110     


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                             +.....          ..+.      .......+.+.+|+|+++..++.... ....|+++++.+|.
T Consensus       220 -------~~~~~~----------~~~~------~~~~~~~~~~p~dvA~~i~~l~s~~~-~~itG~~i~vdGG~  269 (271)
T 4iin_A          220 -------LKDELK----------ADYV------KNIPLNRLGSAKEVAEAVAFLLSDHS-SYITGETLKVNGGL  269 (271)
T ss_dssp             -------------------------CG------GGCTTCSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTS
T ss_pred             -------hcHHHH----------HHHH------hcCCcCCCcCHHHHHHHHHHHhCCCc-CCCcCCEEEeCCCe
Confidence                   000000          0011      12223457899999999999997632 23567999998775

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=98.05  E-value=3.1e-06  Score=66.17  Aligned_cols=116  Identities=9%  Similarity=-0.105  Sum_probs=75.9

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      .+..+||++||...+..           ..+...|+.+|.+.+.+.+.++.++  .++.+.+++||.+..+....     
T Consensus       152 ~~~g~iv~isS~~~~~~-----------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~-----  215 (269)
T 3gk3_A          152 RRFGRIVNIGSVNGSRG-----------AFGQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEA-----  215 (269)
T ss_dssp             HTCEEEEEECCHHHHHC-----------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC-----
T ss_pred             cCCCEEEEeCChhhccC-----------CCCcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhh-----
Confidence            34468999999766532           1235689999999999888876653  27999999999998863211     


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcC
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTS  158 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s  158 (208)
                             +..   ......     + .      .......+...+|+|++++.++... .....|+++++.+|..+|
T Consensus       216 -------~~~---~~~~~~-----~-~------~~~~~~~~~~p~dvA~~v~~L~s~~-~~~itG~~i~vdgG~~~s  269 (269)
T 3gk3_A          216 -------VPQ---DVLEAK-----I-L------PQIPVGRLGRPDEVAALIAFLCSDD-AGFVTGADLAINGGMHMS  269 (269)
T ss_dssp             -----------------CC-----S-G------GGCTTSSCBCHHHHHHHHHHHTSTT-CTTCCSCEEEESTTSCCC
T ss_pred             -------hch---hHHHHH-----h-h------hcCCcCCccCHHHHHHHHHHHhCCC-cCCeeCcEEEECCCEeCc
Confidence                   000   000000     0 0      1112234678999999999998763 223667999999887654

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=98.05  E-value=1.1e-05  Score=63.58  Aligned_cols=118  Identities=14%  Similarity=-0.093  Sum_probs=75.4

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      .+..+||++||...+..           ..+...|+.+|.+.+.+.+.++.+.  .++.+.+++||.+.++.        
T Consensus       152 ~~~g~Iv~isS~~~~~~-----------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~--------  212 (277)
T 3gvc_A          152 RGGGAIVNLSSLAGQVA-----------VGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPM--------  212 (277)
T ss_dssp             TTCEEEEEECCGGGTSC-----------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH--------
T ss_pred             cCCcEEEEEcchhhccC-----------CCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCch--------
Confidence            34458999999766532           2235689999999999998876652  17999999999999862        


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEE-EccccCCCC---CcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCc
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTV-FGTDYSTKD---GTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGT  157 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~  157 (208)
                                 .............- ..      .   ......+...+|+|++++.++.... ....|+++++.+|...
T Consensus       213 -----------~~~~~~~~~~~~~~~~~------~~~~~~~~~r~~~pedvA~~v~~L~s~~a-~~itG~~i~vdGG~~~  274 (277)
T 3gvc_A          213 -----------QQTAMAMFDGALGAGGA------RSMIARLQGRMAAPEEMAGIVVFLLSDDA-SMITGTTQIADGGTIA  274 (277)
T ss_dssp             -----------HHHHHTCC------CCH------HHHHHHHHSSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTGGG
T ss_pred             -----------HHHhhhcchhhHHHHhh------hhhhhccccCCCCHHHHHHHHHHHcCCcc-CCccCcEEEECCcchh
Confidence                       11111100000000 00      0   0111346889999999999997632 2356799999887644


Q ss_pred             C
Q 028478          158 S  158 (208)
Q Consensus       158 s  158 (208)
                      +
T Consensus       275 ~  275 (277)
T 3gvc_A          275 A  275 (277)
T ss_dssp             S
T ss_pred             c
Confidence            3

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=98.04  E-value=2.1e-05  Score=61.86  Aligned_cols=112  Identities=7%  Similarity=-0.102  Sum_probs=67.4

Q ss_pred             CCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCC
Q 028478            6 CKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPR   83 (208)
Q Consensus         6 vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~   83 (208)
                      ..+||++||...+..           ..+...|+.+|.+.+.+.+.++.+.  .++.+..++||.+.++....       
T Consensus       163 ~g~Iv~isS~~~~~~-----------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-------  224 (280)
T 4da9_A          163 SRSIINITSVSAVMT-----------SPERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAA-------  224 (280)
T ss_dssp             CEEEEEECCC------------------CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------
T ss_pred             CCEEEEEcchhhccC-----------CCCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhh-------
Confidence            348999999766531           1234679999999999999887663  17999999999998863110       


Q ss_pred             CCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           84 GIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                           +...........               ......+...+|+|++++.++... .....|+++++.+|..
T Consensus       225 -----~~~~~~~~~~~~---------------~~p~~r~~~pedvA~~v~~L~s~~-~~~itG~~i~vdGG~~  276 (280)
T 4da9_A          225 -----VSGKYDGLIESG---------------LVPMRRWGEPEDIGNIVAGLAGGQ-FGFATGSVIQADGGLS  276 (280)
T ss_dssp             -------------------------------------CCBCHHHHHHHHHHHHTST-TGGGTTCEEEESTTCC
T ss_pred             -----cchhHHHHHhhc---------------CCCcCCcCCHHHHHHHHHHHhCcc-ccCCCCCEEEECCCcc
Confidence                 000000000000               111234678999999999998762 2235679999987764

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=98.04  E-value=7e-06  Score=63.67  Aligned_cols=117  Identities=9%  Similarity=-0.005  Sum_probs=76.6

Q ss_pred             CCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCC
Q 028478            6 CKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPR   83 (208)
Q Consensus         6 vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~   83 (208)
                      ..+||++||...+.....    +..+..+...|+.+|.+.|.+++.++.+.  .++.++++||+.+.++...        
T Consensus       144 ~~~iv~~sS~~~~~~~~~----~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--------  211 (265)
T 1h5q_A          144 KGSIVVTSSMSSQIINQS----SLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTA--------  211 (265)
T ss_dssp             CEEEEEECCGGGTSCCEE----ETTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGG--------
T ss_pred             CceEEEeCCchhhccccc----cccccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccccc--------
Confidence            368999999876642111    11223456789999999999998887542  1799999999999986311        


Q ss_pred             CCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           84 GIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        84 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                          .+.+ .........  +               ...+++.+|+|++++.++..+. ....|+.|++.+|..
T Consensus       212 ----~~~~~~~~~~~~~~--~---------------~~~~~~~~dva~~~~~l~~~~~-~~~~G~~~~v~gG~~  263 (265)
T 1h5q_A          212 ----HMDKKIRDHQASNI--P---------------LNRFAQPEEMTGQAILLLSDHA-TYMTGGEYFIDGGQL  263 (265)
T ss_dssp             ----GSCHHHHHHHHHTC--T---------------TSSCBCGGGGHHHHHHHHSGGG-TTCCSCEEEECTTGG
T ss_pred             ----ccchhHHHHHHhcC--c---------------ccCCCCHHHHHHHHHhhccCch-hcCcCcEEEecCCEe
Confidence                0111 111221111  1               1237899999999999987632 235678999987753

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=98.04  E-value=3.9e-06  Score=66.51  Aligned_cols=112  Identities=13%  Similarity=0.064  Sum_probs=74.9

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      .+||++||...+...           .+...|+.+|.+.+.+.+.++.++  .++.+..++||.|.++.           
T Consensus       176 g~iv~isS~~~~~~~-----------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~-----------  233 (291)
T 3ijr_A          176 DVIINTASIVAYEGN-----------ETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPL-----------  233 (291)
T ss_dssp             CEEEEECCTHHHHCC-----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTH-----------
T ss_pred             CEEEEEechHhcCCC-----------CCChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCc-----------
Confidence            389999998776421           234689999999999998887653  27999999999999862           


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCc
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGT  157 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~  157 (208)
                              ........  ....+.      .....+.+.+.+|+|++++.++.... ....|+++++.+|..+
T Consensus       234 --------~~~~~~~~--~~~~~~------~~~p~~r~~~p~dvA~~v~~L~s~~~-~~itG~~i~vdGG~~~  289 (291)
T 3ijr_A          234 --------IPSSFDEK--KVSQFG------SNVPMQRPGQPYELAPAYVYLASSDS-SYVTGQMIHVNGGVIV  289 (291)
T ss_dssp             --------HHHHSCHH--HHHHTT------TTSTTSSCBCGGGTHHHHHHHHSGGG-TTCCSCEEEESSSCCC
T ss_pred             --------ccccCCHH--HHHHHH------ccCCCCCCcCHHHHHHHHHHHhCCcc-CCCcCCEEEECCCccc
Confidence                    11100000  000001      12223457889999999999987632 2356799999877643

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=98.04  E-value=1.4e-05  Score=62.13  Aligned_cols=114  Identities=15%  Similarity=0.041  Sum_probs=74.9

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      .+||++||...+..           ..+...|+.+|.+.+.+.+.++.++  .++.+++++||.++++....        
T Consensus       140 g~iv~isS~~~~~~-----------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--------  200 (261)
T 2wyu_A          140 GGIVTLTYYASEKV-----------VPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARS--------  200 (261)
T ss_dssp             EEEEEEECGGGTSB-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGG--------
T ss_pred             CEEEEEecccccCC-----------CCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhh--------
Confidence            38999999766531           1234679999999999998876543  17999999999999863110        


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcC
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTS  158 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s  158 (208)
                      . ..............  ++               ..+.+++|+|++++.++... .....|+.+++.+|...+
T Consensus       201 ~-~~~~~~~~~~~~~~--p~---------------~~~~~~~dva~~v~~l~s~~-~~~~tG~~~~vdgG~~~~  255 (261)
T 2wyu_A          201 I-PGFTKMYDRVAQTA--PL---------------RRNITQEEVGNLGLFLLSPL-ASGITGEVVYVDAGYHIM  255 (261)
T ss_dssp             C-TTHHHHHHHHHHHS--TT---------------SSCCCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTGGGB
T ss_pred             c-cccHHHHHHHHhcC--CC---------------CCCCCHHHHHHHHHHHcChh-hcCCCCCEEEECCCcccc
Confidence            0 01111222222211  11               23578999999999998753 223457899998876544

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=98.03  E-value=4.1e-06  Score=65.94  Aligned_cols=123  Identities=11%  Similarity=-0.078  Sum_probs=75.3

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      .+..+||++||...+..           ..+...|+.+|.+.+.+.+.++.+.  .++.+.+++||.|.++.........
T Consensus       152 ~~~g~iV~isS~~~~~~-----------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~  220 (279)
T 3sju_A          152 AGWGRIVNIASTGGKQG-----------VMYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGY  220 (279)
T ss_dssp             HTCEEEEEECCGGGTSC-----------CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSC
T ss_pred             cCCcEEEEECChhhccC-----------CCCChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhh
Confidence            34568999999876632           2235689999999999998887763  1799999999999885210000000


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                      ... ..............                ....+.+...+|+|++++.++.... ....|+++++.+|.
T Consensus       221 ~~~-~~~~~~~~~~~~~~----------------~~p~~r~~~pedvA~~v~~L~s~~a-~~itG~~i~vdGG~  276 (279)
T 3sju_A          221 ARH-WGVTEQEVHERFNA----------------KIPLGRYSTPEEVAGLVGYLVTDAA-ASITAQALNVCGGL  276 (279)
T ss_dssp             CSS-SCCCHHHHHHHHHT----------------TCTTSSCBCHHHHHHHHHHHTSSGG-GGCCSCEEEESTTC
T ss_pred             hhc-ccCChHHHHHHHHh----------------cCCCCCCCCHHHHHHHHHHHhCccc-cCcCCcEEEECCCc
Confidence            000 00001111111111                1112346889999999999887632 23567999998775

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=98.02  E-value=4.2e-06  Score=67.24  Aligned_cols=122  Identities=10%  Similarity=-0.033  Sum_probs=82.1

Q ss_pred             EEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCCC
Q 028478            8 NLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRGI   85 (208)
Q Consensus         8 ~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~~   85 (208)
                      +||++||...+..           ......|+.+|.+.+.+.+.++.++  .++.+..++|| +..+.....+       
T Consensus       173 ~IV~isS~~~~~~-----------~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~-------  233 (322)
T 3qlj_A          173 RIINTSSGAGLQG-----------SVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVF-------  233 (322)
T ss_dssp             EEEEECCHHHHHC-----------BTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSC-------
T ss_pred             EEEEEcCHHHccC-----------CCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhh-------
Confidence            8999999766531           1234689999999999999887762  17999999999 6554211100       


Q ss_pred             CCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCc--------
Q 028478           86 PNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGT--------  157 (208)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~--------  157 (208)
                       ..   ...                    .......++..+|+|++++.++.... ....|+.+++.+|...        
T Consensus       234 -~~---~~~--------------------~~~~~~~~~~pedva~~v~~L~s~~~-~~itG~~i~vdGG~~~~~~~~~~~  288 (322)
T 3qlj_A          234 -AE---MMA--------------------TQDQDFDAMAPENVSPLVVWLGSAEA-RDVTGKVFEVEGGKIRVAEGWAHG  288 (322)
T ss_dssp             -CC-------------------------------CCTTCGGGTHHHHHHHTSGGG-GGCCSCEEEEETTEEEEEECCEEE
T ss_pred             -hh---hhh--------------------ccccccCCCCHHHHHHHHHHHhCccc-cCCCCCEEEECCCccccCCCcccc
Confidence             00   000                    01112345688999999999987632 2356789998876533        


Q ss_pred             ---------CHHHHHHHHHHHhCCC
Q 028478          158 ---------SVLEMVAAFEKASGKV  173 (208)
Q Consensus       158 ---------s~~e~~~~i~~~~g~~  173 (208)
                               ++.|+++.+.+.+|.+
T Consensus       289 ~~~~~~~~~~~~el~~~~~~~~~~~  313 (322)
T 3qlj_A          289 PQIDKGARWDPAELGPVVADLLGKA  313 (322)
T ss_dssp             EEEECSSCCCGGGHHHHHHHHHHHS
T ss_pred             cccCccCCCCHHHHHHHHHHHhhcc
Confidence                     7799999999988754

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=98.02  E-value=3.5e-06  Score=65.50  Aligned_cols=124  Identities=12%  Similarity=0.003  Sum_probs=74.6

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      +.+..+||++||...+..           ..+...|+.+|.+.+.+.+.++.++  .++.+++++||.+.++.....+..
T Consensus       133 ~~~~g~iv~isS~~~~~~-----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~  201 (260)
T 2z1n_A          133 EKGWGRMVYIGSVTLLRP-----------WQDLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEE  201 (260)
T ss_dssp             HHTCEEEEEECCGGGTSC-----------CTTBHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----
T ss_pred             hcCCcEEEEECchhhcCC-----------CCCCchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhh
Confidence            346679999999887742           1235689999999999998876543  179999999999998742110000


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                      ...  ...+...   ..      ...+.      .......+.+.+|+|++++.++.... ....|+.+++.+|.
T Consensus       202 ~~~--~~~~~~~---~~------~~~~~------~~~p~~r~~~~~dva~~v~~l~s~~~-~~~tG~~i~vdGG~  258 (260)
T 2z1n_A          202 RAR--RSGITVE---EA------LKSMA------SRIPMGRVGKPEELASVVAFLASEKA-SFITGAVIPVDGGA  258 (260)
T ss_dssp             -----------------------------------CCTTSSCCCHHHHHHHHHHHTSGGG-TTCCSCEEEESTTT
T ss_pred             hhc--ccCCcHH---HH------HHHHH------hcCCCCCccCHHHHHHHHHHHhCccc-cCCCCCEEEeCCCc
Confidence            000  0000000   00      00000      01112347899999999999987632 23567899888764

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=98.02  E-value=2.1e-05  Score=60.24  Aligned_cols=104  Identities=10%  Similarity=-0.037  Sum_probs=70.9

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      .+..+||++||...+..           ..+...|+.+|.+.|.+++.++.+.  .++.++++|||.++++....     
T Consensus       135 ~~~~~iv~isS~~~~~~-----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----  198 (244)
T 2bd0_A          135 QHSGHIFFITSVAATKA-----------FRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGK-----  198 (244)
T ss_dssp             HTCEEEEEECCGGGTSC-----------CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCC-----
T ss_pred             CCCCEEEEEecchhcCC-----------CCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhh-----
Confidence            45679999999887742           2245689999999999997776532  28999999999999973110     


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                       .               ..              ..  ...+++.+|+|++++.++..+.. ...++++...+++.
T Consensus       199 -~---------------~~--------------~~--~~~~~~~~dva~~~~~l~~~~~~-~~~g~~~~~~~~~~  240 (244)
T 2bd0_A          199 -V---------------DD--------------EM--QALMMMPEDIAAPVVQAYLQPSR-TVVEEIILRPTSGD  240 (244)
T ss_dssp             -C---------------CS--------------TT--GGGSBCHHHHHHHHHHHHTSCTT-EEEEEEEEEETTCC
T ss_pred             -c---------------cc--------------cc--cccCCCHHHHHHHHHHHHhCCcc-ccchheEEeccccc
Confidence             0               00              00  12478999999999999987321 23345555554443

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=98.02  E-value=2.9e-05  Score=60.41  Aligned_cols=114  Identities=14%  Similarity=0.091  Sum_probs=75.6

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      .+||++||...+..           ..+...|+.+|.+.+.+.+.++.++  .++.+.+++||.+.++....        
T Consensus       142 g~iv~isS~~~~~~-----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~--------  202 (265)
T 1qsg_A          142 SALLTLSYLGAERA-----------IPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASG--------  202 (265)
T ss_dssp             EEEEEEECGGGTSB-----------CTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGG--------
T ss_pred             CEEEEEcchhhccC-----------CCCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhc--------
Confidence            38999999766532           1235689999999999999887653  27999999999999873110        


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcC
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTS  158 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s  158 (208)
                       ...............  ++               ..+.+.+|+|++++.++.... ....++.+++.+|..++
T Consensus       203 -~~~~~~~~~~~~~~~--p~---------------~~~~~~~dva~~v~~l~s~~~-~~~tG~~~~vdgG~~~~  257 (265)
T 1qsg_A          203 -IKDFRKMLAHCEAVT--PI---------------RRTVTIEDVGNSAAFLCSDLS-AGISGEVVHVDGGFSIA  257 (265)
T ss_dssp             -STTHHHHHHHHHHHS--TT---------------SSCCCHHHHHHHHHHHTSGGG-TTCCSCEEEESTTGGGB
T ss_pred             -ccccHHHHHHHHhcC--CC---------------CCCCCHHHHHHHHHHHhCchh-cCccCCEEEECCCcCCC
Confidence             011111222222211  11               136789999999999987532 23457899998876543

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=98.01  E-value=4.5e-05  Score=60.03  Aligned_cols=121  Identities=12%  Similarity=0.070  Sum_probs=79.4

Q ss_pred             CCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCC
Q 028478            5 GCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDP   82 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~   82 (208)
                      +..++|++||...+..          +..+...|+.+|.+.+.+.+.++.++  .++.+.+++||.|.++......   .
T Consensus       136 ~~g~iv~isS~~~~~~----------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~---~  202 (280)
T 3tox_A          136 GGGSLTFTSSFVGHTA----------GFAGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANL---P  202 (280)
T ss_dssp             TCEEEEEECCSBTTTB----------CCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGS---T
T ss_pred             CCCEEEEEcChhhCcC----------CCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhc---c
Confidence            4458999999776621          12235689999999999999887653  2799999999999987421100   0


Q ss_pred             CCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHH
Q 028478           83 RGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVL  160 (208)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~  160 (208)
                          .. .+.........                .....+...+|+|++++.++.... ....|+++++.+|..++..
T Consensus       203 ----~~-~~~~~~~~~~~----------------~p~~r~~~pedvA~~v~~L~s~~a-~~itG~~i~vdGG~~~~~~  258 (280)
T 3tox_A          203 ----GA-APETRGFVEGL----------------HALKRIARPEEIAEAALYLASDGA-SFVTGAALLADGGASVTKA  258 (280)
T ss_dssp             ----TC-CTHHHHHHHTT----------------STTSSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTGGGCC-
T ss_pred             ----cc-CHHHHHHHhcc----------------CccCCCcCHHHHHHHHHHHhCccc-cCCcCcEEEECCCcccccc
Confidence                00 01111222221                112246889999999999997632 2366799999988766543

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=98.01  E-value=1.5e-05  Score=62.21  Aligned_cols=122  Identities=10%  Similarity=-0.012  Sum_probs=75.6

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      +.+..+||++||...+..           ..+...|+.+|.+.+.+.+.++.+.  .++.+++++||.+.++......  
T Consensus       141 ~~~~g~iv~isS~~~~~~-----------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--  207 (267)
T 1iy8_A          141 EQGSGMVVNTASVGGIRG-----------IGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSM--  207 (267)
T ss_dssp             HHTCCEEEEECCGGGTSB-----------CSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHH--
T ss_pred             HcCCCEEEEEcchhhccC-----------CCCCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccc--
Confidence            345679999999876532           1235689999999999998876542  1799999999999886200000  


Q ss_pred             CCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCc
Q 028478           81 DPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGT  157 (208)
Q Consensus        81 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~  157 (208)
                      . .. ...... ....... .                .....+.+.+|+|++++.++..+. ....|+.+++.+|...
T Consensus       208 ~-~~-~~~~~~~~~~~~~~-~----------------~p~~r~~~~~dvA~~v~~l~s~~~-~~~tG~~i~vdGG~~~  265 (267)
T 1iy8_A          208 K-QL-DPENPRKAAEEFIQ-V----------------NPSKRYGEAPEIAAVVAFLLSDDA-SYVNATVVPIDGGQSA  265 (267)
T ss_dssp             H-HH-CTTCHHHHHHHHHT-T----------------CTTCSCBCHHHHHHHHHHHTSGGG-TTCCSCEEEESTTTTT
T ss_pred             c-cc-ChhhhhhHHHHHhc-c----------------CCCCCCcCHHHHHHHHHHHcCccc-cCCCCCEEEECCCccc
Confidence            0 00 000000 0001111 1                112347899999999999987632 2356789999877644

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=98.00  E-value=1.7e-05  Score=61.69  Aligned_cols=119  Identities=15%  Similarity=0.099  Sum_probs=76.7

Q ss_pred             EEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCCC
Q 028478            8 NLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRGI   85 (208)
Q Consensus         8 ~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~~   85 (208)
                      ++|++||...+..           ..+...|+.+|.+.+.+.+.++.++  .++.+.+++||.|..+....         
T Consensus       148 ~iv~isS~~~~~~-----------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~---------  207 (271)
T 3ek2_A          148 SLLTLSYLGAERA-----------IPNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASG---------  207 (271)
T ss_dssp             EEEEEECGGGTSB-----------CTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CC---------
T ss_pred             eEEEEeccccccC-----------CCCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhc---------
Confidence            7999999776532           2235789999999999998887653  27999999999998863110         


Q ss_pred             CCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHHHHHH
Q 028478           86 PNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVA  164 (208)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~  164 (208)
                      ....-..........  +               ...+...+|+|++++.++... .....|+.+++.+|...++.++++
T Consensus       208 ~~~~~~~~~~~~~~~--~---------------~~~~~~pedva~~i~~l~s~~-~~~~tG~~i~vdgG~~~~~~~~~~  268 (271)
T 3ek2_A          208 IKSFGKILDFVESNS--P---------------LKRNVTIEQVGNAGAFLLSDL-ASGVTAEVMHVDSGFNAVVGGMAG  268 (271)
T ss_dssp             CHHHHHHHHHHHHHS--T---------------TSSCCCHHHHHHHHHHHHSGG-GTTCCSEEEEESTTGGGBCCCC--
T ss_pred             ccchHHHHHHHHhcC--C---------------cCCCCCHHHHHHHHHHHcCcc-cCCeeeeEEEECCCeeeehhhhhh
Confidence            000011222222211  1               123678999999999999763 224677999999998777766543

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=98.00  E-value=1.8e-05  Score=62.06  Aligned_cols=124  Identities=10%  Similarity=-0.014  Sum_probs=77.9

Q ss_pred             CCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCC
Q 028478            6 CKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPR   83 (208)
Q Consensus         6 vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~   83 (208)
                      ..+||++||...+....       .+..+...|+.+|.+.+.+.+.++.++  .++.+..++||.|.++...        
T Consensus       150 ~g~iv~isS~~~~~~~~-------~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~--------  214 (278)
T 3sx2_A          150 GGSIVLISSSAGLAGVG-------SADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMIN--------  214 (278)
T ss_dssp             CEEEEEECCGGGTSCCC-------CSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTS--------
T ss_pred             CcEEEEEccHHhcCCCc-------cCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccch--------
Confidence            34899999977653211       111234579999999999999887654  1699999999999987311        


Q ss_pred             CCCCChH-HHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           84 GIPNNLM-PFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        84 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                         .... ..+........ .....+      +... +.+++.+|+|++++.++... .....|+++++.+|..
T Consensus       215 ---~~~~~~~~~~~~~~~~-~~~~~~------~~~p-~~~~~p~dvA~~v~~l~s~~-~~~itG~~i~vdGG~~  276 (278)
T 3sx2_A          215 ---NEFTREWLAKMAAATD-TPGAMG------NAMP-VEVLAPEDVANAVAWLVSDQ-ARYITGVTLPVDAGFL  276 (278)
T ss_dssp             ---SHHHHHHHHHHHHHCC---CTTS------CSSS-CSSBCHHHHHHHHHHHTSGG-GTTCCSCEEEESTTTT
T ss_pred             ---hhhHHHHHhhccchhh-hhhhhh------hhcC-cCcCCHHHHHHHHHHHhCcc-cccccCCEEeECCCcc
Confidence               1111 12222111110 111112      2222 67899999999999998763 2236679999987753

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=97.99  E-value=2.8e-06  Score=65.78  Aligned_cols=114  Identities=9%  Similarity=-0.106  Sum_probs=76.1

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      .+..+||++||...+..           ..+...|+.+|.+.+.+.+.++.++  .++.+.+++||.+.++...      
T Consensus       140 ~~~g~iv~isS~~~~~~-----------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~------  202 (256)
T 3ezl_A          140 RGWGRIINISSVNGQKG-----------QFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVK------  202 (256)
T ss_dssp             HTCEEEEEECCCCGGGS-----------CSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH------
T ss_pred             cCCCEEEEEcchhhccC-----------CCCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCcccc------
Confidence            35568999999766532           2245789999999999988877652  2799999999999875211      


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCc
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGT  157 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~  157 (208)
                        .   ..-..........                 ....+...+|+|++++.++... .....|+++++.+|..+
T Consensus       203 --~---~~~~~~~~~~~~~-----------------~~~~~~~~~dva~~~~~l~s~~-~~~~tG~~i~vdgG~~~  255 (256)
T 3ezl_A          203 --A---IRPDVLEKIVATI-----------------PVRRLGSPDEIGSIVAWLASEE-SGFSTGADFSLNGGLHM  255 (256)
T ss_dssp             --T---SCHHHHHHHHHHS-----------------TTSSCBCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTSCC
T ss_pred             --c---cCHHHHHHHHhcC-----------------CCCCCcCHHHHHHHHHHHhCCc-ccCCcCcEEEECCCEeC
Confidence              0   0011222222221                 1123678999999999998653 22466799999887643

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=97.99  E-value=3.4e-05  Score=59.93  Aligned_cols=117  Identities=13%  Similarity=0.046  Sum_probs=78.6

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      +.+..+||++||...+..           ..+...|+.+|.+.+.+.+.++.++  .++.+..++||.+.++.....   
T Consensus       130 ~~~~g~iv~isS~~~~~~-----------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~---  195 (258)
T 3oid_A          130 KNGGGHIVSISSLGSIRY-----------LENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHF---  195 (258)
T ss_dssp             TTTCEEEEEEEEGGGTSB-----------CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGC---
T ss_pred             hcCCcEEEEECchhhCCC-----------CCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhc---
Confidence            345568999999876632           2245789999999999999887764  279999999999988632100   


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCc
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGT  157 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~  157 (208)
                            ..-...........  +               ...+.+.+|+|++++.++... .....|+++++.+|...
T Consensus       196 ------~~~~~~~~~~~~~~--p---------------~~r~~~~~dva~~v~~L~s~~-~~~itG~~i~vdGG~~~  248 (258)
T 3oid_A          196 ------PNREDLLEDARQNT--P---------------AGRMVEIKDMVDTVEFLVSSK-ADMIRGQTIIVDGGRSL  248 (258)
T ss_dssp             ------TTHHHHHHHHHHHC--T---------------TSSCBCHHHHHHHHHHHTSST-TTTCCSCEEEESTTGGG
T ss_pred             ------ccCHHHHHHHHhcC--C---------------CCCCcCHHHHHHHHHHHhCcc-cCCccCCEEEECCCccC
Confidence                  00011222222211  1               234688999999999998763 23466799999887643

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=97.98  E-value=1.5e-05  Score=63.13  Aligned_cols=112  Identities=16%  Similarity=0.125  Sum_probs=74.4

Q ss_pred             EEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCCC
Q 028478            8 NLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRGI   85 (208)
Q Consensus         8 ~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~~   85 (208)
                      +||++||...+...           .....|+.+|.+.+.+.+.++.++  .++.+..++||.|.++..... +..    
T Consensus       180 ~Iv~isS~~~~~~~-----------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~-~~~----  243 (294)
T 3r3s_A          180 SIITTSSIQAYQPS-----------PHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISG-GQT----  243 (294)
T ss_dssp             EEEEECCGGGTSCC-----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTT-TSC----
T ss_pred             EEEEECChhhccCC-----------CCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCcccccccc-CCC----
Confidence            89999998877521           235679999999999998887653  279999999999998621000 000    


Q ss_pred             CCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCc
Q 028478           86 PNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGT  157 (208)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~  157 (208)
                       ..   .....           .      .......+...+|+|++++.++... .....|+++++.+|..+
T Consensus       244 -~~---~~~~~-----------~------~~~p~~r~~~p~dvA~~v~~L~s~~-~~~itG~~i~vdGG~~l  293 (294)
T 3r3s_A          244 -QD---KIPQF-----------G------QQTPMKRAGQPAELAPVYVYLASQE-SSYVTAEVHGVCGGEHL  293 (294)
T ss_dssp             -GG---GSTTT-----------T------TTSTTSSCBCGGGGHHHHHHHHSGG-GTTCCSCEEEESTTCCC
T ss_pred             -HH---HHHHH-----------H------hcCCCCCCcCHHHHHHHHHHHhCcc-ccCCCCCEEEECCCccC
Confidence             00   00000           0      1112234678899999999998763 22356799999888654

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=97.97  E-value=1.1e-05  Score=62.74  Aligned_cols=114  Identities=15%  Similarity=-0.002  Sum_probs=76.7

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhc---CCCccEEEEecccccCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRS---DSEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      .+..++|++||.....          .+..+...|+.+|.+.+.+.+.++.+   + ++.+.+++||.+.++....    
T Consensus       137 ~~~g~iv~isS~~~~~----------~~~~~~~~Y~asK~a~~~l~~~la~e~~~~-gi~vn~v~PG~v~t~~~~~----  201 (262)
T 3pk0_A          137 SGSGRVVLTSSITGPI----------TGYPGWSHYGATKAAQLGFMRTAAIELAPH-KITVNAIMPGNIMTEGLLE----  201 (262)
T ss_dssp             HSSCEEEEECCSBTTT----------BCCTTCHHHHHHHHHHHHHHHHHHHHHGGG-TCEEEEEEECSBCCHHHHT----
T ss_pred             cCCcEEEEEechhhcc----------CCCCCChhhHHHHHHHHHHHHHHHHHHHhh-CcEEEEEEeCcCcCccccc----
Confidence            3556999999975431          01223568999999999999998776   4 8999999999999862110    


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCc
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGT  157 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~  157 (208)
                             ..-.+........  +               ..-+...+|+|+++..++... .....|+++++.+|..+
T Consensus       202 -------~~~~~~~~~~~~~--p---------------~~r~~~p~dva~~v~~L~s~~-~~~itG~~i~vdGG~~~  253 (262)
T 3pk0_A          202 -------NGEEYIASMARSI--P---------------AGALGTPEDIGHLAAFLATKE-AGYITGQAIAVDGGQVL  253 (262)
T ss_dssp             -------TCHHHHHHHHTTS--T---------------TSSCBCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTTTC
T ss_pred             -------cCHHHHHHHHhcC--C---------------CCCCcCHHHHHHHHHHHhCcc-ccCCcCCEEEECCCeec
Confidence                   0011222222221  1               123678999999999998763 22366799999887643

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=97.97  E-value=7e-06  Score=62.97  Aligned_cols=117  Identities=10%  Similarity=0.047  Sum_probs=75.9

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      +.+..++|++||...+....         ..+...|+.+|.+.+.+.+.++.+.  .+++++++||+.+.++...     
T Consensus       118 ~~~~g~iv~isS~~~~~~~~---------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-----  183 (239)
T 2ekp_A          118 EAGWGRVLFIGSVTTFTAGG---------PVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTL-----  183 (239)
T ss_dssp             HHTCEEEEEECCGGGTSCCT---------TSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGH-----
T ss_pred             HcCCcEEEEECchhhccCCC---------CCCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhh-----
Confidence            34667999999988775321         1245689999999999998877653  2799999999999886210     


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                         .... --....... ..   .             ....+...+|+|++++.++.... ....|+.+++.+|.
T Consensus       184 ---~~~~-~~~~~~~~~-~~---~-------------p~~~~~~~~dvA~~~~~l~s~~~-~~~tG~~~~vdgG~  236 (239)
T 2ekp_A          184 ---PLRQ-NPELYEPIT-AR---I-------------PMGRWARPEEIARVAAVLCGDEA-EYLTGQAVAVDGGF  236 (239)
T ss_dssp             ---HHHT-CHHHHHHHH-TT---C-------------TTSSCBCHHHHHHHHHHHTSGGG-TTCCSCEEEESTTT
T ss_pred             ---cccc-CHHHHHHHH-hc---C-------------CCCCCcCHHHHHHHHHHHcCchh-cCCCCCEEEECCCc
Confidence               0000 000111111 11   0             11236899999999999987532 23567889887764

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=97.97  E-value=2.8e-05  Score=61.04  Aligned_cols=118  Identities=8%  Similarity=0.007  Sum_probs=75.2

Q ss_pred             CCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhc---CCCccEEEEecccccCCCCCCCCCCCC
Q 028478            6 CKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRS---DSEWKIILLRYFNPVGAHPSGKIGEDP   82 (208)
Q Consensus         6 vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~iiR~~~i~G~~~~~~~~~~~   82 (208)
                      ..+||++||...+..           ......|+.+|.+.+.+.+.++.+   + ++.+.+++||.+.++...       
T Consensus       157 ~g~iv~isS~~~~~~-----------~~~~~~Y~asKaa~~~~~~~la~e~~~~-gi~vn~v~PG~v~t~~~~-------  217 (280)
T 3pgx_A          157 GGSIVVVSSSAGLKA-----------TPGNGHYSASKHGLTALTNTLAIELGEY-GIRVNSIHPYSVETPMIE-------  217 (280)
T ss_dssp             CEEEEEECCGGGTSC-----------CTTBHHHHHHHHHHHHHHHHHHHHHGGG-TEEEEEEEECSBCSTTCC-------
T ss_pred             CCEEEEEcchhhccC-----------CCCchhHHHHHHHHHHHHHHHHHHhhhc-CeEEEEEeeCcccCcccc-------
Confidence            347999999876632           123568999999999999988775   4 899999999999997311       


Q ss_pred             CCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           83 RGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                         ...+...+....... ..+...       .....| +++++|+|++++.++... .....|+++++.+|.
T Consensus       218 ---~~~~~~~~~~~~~~~-~~~~~~-------~~~~~r-~~~p~dvA~~v~~L~s~~-~~~itG~~i~vdGG~  277 (280)
T 3pgx_A          218 ---PEAMMEIFARHPSFV-HSFPPM-------PVQPNG-FMTADEVADVVAWLAGDG-SGTLTGTQIPVDKGA  277 (280)
T ss_dssp             ---HHHHHHHHHHCGGGG-GGSCCB-------TTBCSS-CBCHHHHHHHHHHHHSGG-GTTCSSCEEEESTTG
T ss_pred             ---hhhhhhhhhcCchhh-hhhhhc-------ccCCCC-CCCHHHHHHHHHHHhCcc-ccCCCCCEEEECCCc
Confidence               001111111110000 011111       111123 899999999999998763 223567999998764

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=97.96  E-value=7.6e-06  Score=64.13  Aligned_cols=114  Identities=11%  Similarity=-0.102  Sum_probs=75.3

Q ss_pred             CCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCC
Q 028478            5 GCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDP   82 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~   82 (208)
                      +-.+||++||...+..           ..+...|+.+|.+.+.+.+.++.++  .++.+.+++||.+.++...       
T Consensus       155 ~~g~iv~isS~~~~~~-----------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~-------  216 (270)
T 3ftp_A          155 RGGRIVNITSVVGSAG-----------NPGQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTK-------  216 (270)
T ss_dssp             TCEEEEEECCHHHHHC-----------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHH-------
T ss_pred             CCCEEEEECchhhCCC-----------CCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchh-------
Confidence            3458999999776532           1235689999999999888877653  1799999999999875210       


Q ss_pred             CCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcC
Q 028478           83 RGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTS  158 (208)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s  158 (208)
                           .+...........                .....+.+.+|+|++++.++... .....|+++++.+|..+|
T Consensus       217 -----~~~~~~~~~~~~~----------------~p~~r~~~pedvA~~v~~L~s~~-~~~itG~~i~vdGG~~~s  270 (270)
T 3ftp_A          217 -----GLPQEQQTALKTQ----------------IPLGRLGSPEDIAHAVAFLASPQ-AGYITGTTLHVNGGMFMS  270 (270)
T ss_dssp             -----HSCHHHHHHHHTT----------------CTTCSCBCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTSSCC
T ss_pred             -----hcCHHHHHHHHhc----------------CCCCCCCCHHHHHHHHHHHhCCC-cCCccCcEEEECCCcccC
Confidence                 0001111111111                11234789999999999998652 223567999998886543

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.95  E-value=5.5e-05  Score=57.77  Aligned_cols=102  Identities=9%  Similarity=0.077  Sum_probs=70.5

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC----CCccEEEEecccccCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD----SEWKIILLRYFNPVGAHPSGKIGEDP   82 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~iiR~~~i~G~~~~~~~~~~~   82 (208)
                      .++|++||...+..           ..+...|+.+|.+.+.+.+.++.++    .++.+++++||.+.++          
T Consensus       123 g~iv~isS~~~~~~-----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~----------  181 (236)
T 1ooe_A          123 GLLQLTGAAAAMGP-----------TPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTP----------  181 (236)
T ss_dssp             EEEEEECCGGGGSC-----------CTTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCH----------
T ss_pred             CEEEEECchhhccC-----------CCCcHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCc----------
Confidence            38999999877631           2235689999999999999988764    1499999999999885          


Q ss_pred             CCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           83 RGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                               +...... .                .....++..+|+|++++.++..+......|+.+++.++.
T Consensus       182 ---------~~~~~~~-~----------------~~~~~~~~~~dvA~~i~~~l~s~~~~~~~G~~~~v~gg~  228 (236)
T 1ooe_A          182 ---------MNRKWMP-N----------------ADHSSWTPLSFISEHLLKWTTETSSRPSSGALLKITTEN  228 (236)
T ss_dssp             ---------HHHHHST-T----------------CCGGGCBCHHHHHHHHHHHHHCGGGCCCTTCEEEEEEET
T ss_pred             ---------chhhcCC-C----------------ccccccCCHHHHHHHHHHHHcCCCcccccccEEEEecCC
Confidence                     2222111 1                011235678999999997774433334567888887654

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=97.95  E-value=5.9e-06  Score=63.80  Aligned_cols=114  Identities=12%  Similarity=0.005  Sum_probs=72.7

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      +.+..++|++||...+..           ..+...|+.+|.+.+.+.+.++.+.  .++.+++++||.+.++...     
T Consensus       129 ~~~~g~iv~isS~~~~~~-----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~-----  192 (247)
T 1uzm_A          129 RNKFGRMIFIGSVSGLWG-----------IGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTR-----  192 (247)
T ss_dssp             HTTCEEEEEECCCCC----------------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH-----
T ss_pred             hCCCCEEEEECCHhhccC-----------CCCChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchh-----
Confidence            346679999999765421           1234689999999999988876652  2799999999999875100     


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                             .+...........   .             ....+.+.+|+|++++.++... .....|+.+++.+|..
T Consensus       193 -------~~~~~~~~~~~~~---~-------------p~~~~~~~~dvA~~~~~l~s~~-~~~~~G~~i~vdgG~~  244 (247)
T 1uzm_A          193 -------ALDERIQQGALQF---I-------------PAKRVGTPAEVAGVVSFLASED-ASYISGAVIPVDGGMG  244 (247)
T ss_dssp             -------HSCHHHHHHHGGG---C-------------TTCSCBCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTTT
T ss_pred             -------hcCHHHHHHHHhc---C-------------CCCCCcCHHHHHHHHHHHcCcc-ccCCcCCEEEECCCcc
Confidence                   0001111111111   0             1124789999999999998753 2235678999987754

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=97.95  E-value=7.2e-05  Score=58.44  Aligned_cols=108  Identities=13%  Similarity=-0.014  Sum_probs=73.6

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      .+||++||...+..           ..+...|+.+|.+.+.+.+.++.+.  .++.+++++||.+.++ . .   .    
T Consensus       162 g~iv~isS~~~~~~-----------~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~-~---~----  221 (276)
T 1mxh_A          162 LSVVNLCDAMTDLP-----------LPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-P-A---M----  221 (276)
T ss_dssp             EEEEEECCGGGGSC-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-S-S---S----
T ss_pred             cEEEEECchhhcCC-----------CCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-c-c---C----
Confidence            58999999877642           1235689999999999998876543  1799999999999986 1 0   0    


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                       .   -..........  ++              .|++.+.+|+|++++.++.... ....|+.+++.+|.
T Consensus       222 -~---~~~~~~~~~~~--p~--------------~r~~~~~~dva~~v~~l~s~~~-~~~tG~~~~vdgG~  271 (276)
T 1mxh_A          222 -P---QETQEEYRRKV--PL--------------GQSEASAAQIADAIAFLVSKDA-GYITGTTLKVDGGL  271 (276)
T ss_dssp             -C---HHHHHHHHTTC--TT--------------TSCCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTG
T ss_pred             -C---HHHHHHHHhcC--CC--------------CCCCCCHHHHHHHHHHHhCccc-cCccCcEEEECCch
Confidence             0   11222222211  11              1337899999999999987532 23457899998764

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=97.94  E-value=6.1e-06  Score=63.58  Aligned_cols=119  Identities=9%  Similarity=-0.074  Sum_probs=74.2

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      .+..++|++||...+....          .+...|+.+|.+.+.+.+.++.+.  .+++++++||+.++++......   
T Consensus       123 ~~~g~iv~isS~~~~~~~~----------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---  189 (246)
T 2ag5_A          123 QKSGNIINMSSVASSVKGV----------VNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERI---  189 (246)
T ss_dssp             HTCEEEEEECCSBTTTBCC----------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHH---
T ss_pred             cCCceEEEEechHhCcCCC----------CCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhh---
Confidence            4567999999976653211          135689999999999998887642  1799999999999986210000   


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                      ...  ..............                 ....+.+.+|+|++++.++.... ....|+.+++.+|.
T Consensus       190 ~~~--~~~~~~~~~~~~~~-----------------~~~~~~~~~dvA~~v~~l~s~~~-~~~tG~~i~vdgG~  243 (246)
T 2ag5_A          190 QAR--GNPEEARNDFLKRQ-----------------KTGRFATAEEIAMLCVYLASDES-AYVTGNPVIIDGGW  243 (246)
T ss_dssp             HHS--SSHHHHHHHHHHTC-----------------TTSSCEEHHHHHHHHHHHHSGGG-TTCCSCEEEECTTG
T ss_pred             hcc--cCcHHHHHHHHhcC-----------------CCCCCCCHHHHHHHHHHHhCccc-cCCCCCEEEECCCc
Confidence            000  00000111111111                 01237899999999999987632 23567899887764

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=97.94  E-value=9.6e-06  Score=63.34  Aligned_cols=130  Identities=11%  Similarity=0.014  Sum_probs=78.4

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      .+..++|++||...+..           ..+...|+.+|.+.+.+.+.++.++  .++.+..+.||.+..+.........
T Consensus       134 ~~~g~iv~isS~~~~~~-----------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~  202 (267)
T 3t4x_A          134 RKEGRVIFIASEAAIMP-----------SQEMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSL  202 (267)
T ss_dssp             TTEEEEEEECCGGGTSC-----------CTTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHS
T ss_pred             CCCCEEEEEcchhhccC-----------CCcchHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhc
Confidence            44568999999877632           2245789999999999999988765  2689999999998875100000000


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcC
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTS  158 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s  158 (208)
                      ........-...........             .....+.+.+.+|+|++++.++... .....|+++++.+|...+
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~-------------~~~~~~r~~~pedvA~~v~fL~s~~-~~~itG~~i~vdGG~~~s  265 (267)
T 3t4x_A          203 YPNEQLTIEEAEKRFMKENR-------------PTSIIQRLIRPEEIAHLVTFLSSPL-SSAINGSALRIDGGLVRS  265 (267)
T ss_dssp             STTSCCCHHHHHHHHHHHHC-------------TTCSSCSCBCTHHHHHHHHHHHSGG-GTTCCSCEEEESTTCSCS
T ss_pred             CcccCCCHHHHHHHHhhccC-------------CcccccCccCHHHHHHHHHHHcCcc-ccCccCCeEEECCCcccc
Confidence            00000000001111111100             0111345789999999999998752 224667999999887655

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=97.94  E-value=6.3e-05  Score=59.74  Aligned_cols=97  Identities=14%  Similarity=0.068  Sum_probs=60.8

Q ss_pred             CCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCC
Q 028478            6 CKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPR   83 (208)
Q Consensus         6 vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~   83 (208)
                      ..+||++||...+..           ..+...|+.||.+.+.+.+.++.++  .++.+.+++||.+..+.          
T Consensus       160 ~g~iv~isS~~~~~~-----------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~----------  218 (301)
T 3tjr_A          160 GGHIAFTASFAGLVP-----------NAGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKL----------  218 (301)
T ss_dssp             CEEEEEECCGGGTSC-----------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSH----------
T ss_pred             CcEEEEeCchhhcCC-----------CCCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCcccccc----------
Confidence            348999999776632           2235689999999999888876553  17999999999988751          


Q ss_pred             CCCCChHHHHHHHHhCC-------CCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhh
Q 028478           84 GIPNNLMPFVTQVAVGR-------RPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHK  138 (208)
Q Consensus        84 ~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  138 (208)
                               ........       ..+...++      .......+++++|+|++++.+++.
T Consensus       219 ---------~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~pedvA~~i~~~l~~  265 (301)
T 3tjr_A          219 ---------VSNSERIRGADYGMSATPEGAFG------PLPTQDESVSADDVARLTADAILA  265 (301)
T ss_dssp             ---------HHHHHHHC----------------------------CCCHHHHHHHHHHHHHH
T ss_pred             ---------ccccccccchhhccccChhhhcc------ccccccCCCCHHHHHHHHHHHHhc
Confidence                     11110000       00122222      334456789999999999999998

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=97.94  E-value=2.2e-05  Score=60.40  Aligned_cols=108  Identities=11%  Similarity=0.014  Sum_probs=72.6

Q ss_pred             EEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCCC
Q 028478            8 NLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRGI   85 (208)
Q Consensus         8 ~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~~   85 (208)
                      ++|++||...+..           ..+...|+.+|.+.+.+.+.++.+.  .++.+.+++||.+.++..           
T Consensus       121 ~iv~~sS~~~~~~-----------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~-----------  178 (244)
T 4e4y_A          121 SIVFNGSDQCFIA-----------KPNSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLY-----------  178 (244)
T ss_dssp             EEEEECCGGGTCC-----------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHH-----------
T ss_pred             EEEEECCHHHccC-----------CCCCchhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhh-----------
Confidence            7999999877632           1234689999999999999887632  179999999999988520           


Q ss_pred             CCChHHH-----------HHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCC
Q 028478           86 PNNLMPF-----------VTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTG  154 (208)
Q Consensus        86 ~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~  154 (208)
                       ..+...           ......                .......+.+.+|+|++++.++.... ....|+.+++.+|
T Consensus       179 -~~~~~~~~~~~~~~~~~~~~~~~----------------~~~p~~r~~~p~dvA~~v~~l~s~~~-~~itG~~i~vdGG  240 (244)
T 4e4y_A          179 -RNLIQKYANNVGISFDEAQKQEE----------------KEFPLNRIAQPQEIAELVIFLLSDKS-KFMTGGLIPIDGG  240 (244)
T ss_dssp             -HHHHHHHHHHHTCCHHHHHHHHH----------------TTSTTSSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTT
T ss_pred             -HHHHHhhhhhcCCCHHHHHHHHh----------------hcCCCCCCcCHHHHHHHHHHHhcCcc-ccccCCeEeECCC
Confidence             000000           111111                11122457899999999999997632 2356799999876


Q ss_pred             C
Q 028478          155 K  155 (208)
Q Consensus       155 ~  155 (208)
                      .
T Consensus       241 ~  241 (244)
T 4e4y_A          241 Y  241 (244)
T ss_dssp             G
T ss_pred             c
Confidence            5

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=97.93  E-value=2e-05  Score=61.05  Aligned_cols=121  Identities=9%  Similarity=0.000  Sum_probs=74.3

Q ss_pred             CCC-CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCC
Q 028478            4 HGC-KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         4 ~~v-k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      .+. .+||++||...+..           ..+...|+.+|.+.+.+.+.++.++  .++.+.+++||.+..+..      
T Consensus       130 ~~~~g~iv~isS~~~~~~-----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~------  192 (258)
T 3a28_C          130 LGVKGKIINAASIAAIQG-----------FPILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMW------  192 (258)
T ss_dssp             HTCCCEEEEECCGGGTSC-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHH------
T ss_pred             cCCCcEEEEECcchhccC-----------CCCchhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhh------
Confidence            355 69999999876632           1235689999999999998876543  279999999999987510      


Q ss_pred             CCCCCCCChHHHHHHHH--hCCC-Ce-eEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           81 DPRGIPNNLMPFVTQVA--VGRR-PE-LTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~--~~~~-~~-~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                               -.......  .+.. .. ...+.      .......+.+.+|+|++++.++... .....|+.+++.+|..
T Consensus       193 ---------~~~~~~~~~~~~~~~~~~~~~~~------~~~p~~r~~~p~dvA~~v~~l~s~~-~~~~tG~~i~vdGG~~  256 (258)
T 3a28_C          193 ---------EQIDAELSKINGKPIGENFKEYS------SSIALGRPSVPEDVAGLVSFLASEN-SNYVTGQVMLVDGGML  256 (258)
T ss_dssp             ---------HHHHHHHHHHHCCCTTHHHHHHH------TTCTTSSCBCHHHHHHHHHHHHSGG-GTTCCSCEEEESSSSC
T ss_pred             ---------hhhhhhhccccCCchHHHHHHHH------hcCCCCCccCHHHHHHHHHHHhCcc-cCCCCCCEEEECCCEe
Confidence                     00000000  0000 00 00000      0011123789999999999998763 2235678999987754


Q ss_pred             c
Q 028478          157 T  157 (208)
Q Consensus       157 ~  157 (208)
                      +
T Consensus       257 ~  257 (258)
T 3a28_C          257 Y  257 (258)
T ss_dssp             C
T ss_pred             c
Confidence            3

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=97.92  E-value=5.5e-06  Score=64.63  Aligned_cols=122  Identities=11%  Similarity=0.006  Sum_probs=75.7

Q ss_pred             CCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHh-----hcCCCccEEEEecccccCCCCCCCCCC
Q 028478            6 CKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVH-----RSDSEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         6 vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~-----~~~~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      ..+||++||...+...           .+...|+.+|.+.+.+.+.++     ... ++.+++++||.+.++.....   
T Consensus       132 ~g~iv~isS~~~~~~~-----------~~~~~Y~~sK~a~~~~~~~~ala~e~~~~-gi~v~~v~Pg~v~t~~~~~~---  196 (267)
T 2gdz_A          132 GGIIINMSSLAGLMPV-----------AQQPVYCASKHGIVGFTRSAALAANLMNS-GVRLNAICPGFVNTAILESI---  196 (267)
T ss_dssp             CEEEEEECCGGGTSCC-----------TTCHHHHHHHHHHHHHHHHHHHHHHHHTC-CEEEEEEEESCBSSHHHHGG---
T ss_pred             CCEEEEeCCccccCCC-----------CCCchHHHHHHHHHHHHHHHHHHHHhccC-CcEEEEEecCcCcchhhhcc---
Confidence            5689999998777421           234579999999999988642     234 89999999999987520000   


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHH
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVL  160 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~  160 (208)
                      ...........+.....                 .......+++.+|+|++++.++...   ...|+++++.+++.+++.
T Consensus       197 ~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~dvA~~v~~l~s~~---~~~G~~~~v~gg~~~~~~  256 (267)
T 2gdz_A          197 EKEENMGQYIEYKDHIK-----------------DMIKYYGILDPPLIANGLITLIEDD---ALNGAIMKITTSKGIHFQ  256 (267)
T ss_dssp             GCHHHHGGGGGGHHHHH-----------------HHHHHHCCBCHHHHHHHHHHHHHCT---TCSSCEEEEETTTEEEEC
T ss_pred             ccccccchhhhHHHHHH-----------------HHhccccCCCHHHHHHHHHHHhcCc---CCCCcEEEecCCCccccc
Confidence            00000000000000000                 0001124689999999999999863   366799999988877665


Q ss_pred             HH
Q 028478          161 EM  162 (208)
Q Consensus       161 e~  162 (208)
                      |+
T Consensus       257 ~~  258 (267)
T 2gdz_A          257 DY  258 (267)
T ss_dssp             CC
T ss_pred             Cc
Confidence            43

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=97.92  E-value=8e-06  Score=64.23  Aligned_cols=134  Identities=7%  Similarity=-0.052  Sum_probs=78.1

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCC---CC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIG---ED   81 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~---~~   81 (208)
                      .++|++||...+......+..|..+..+...|+.+|.+.+.+.+.++.++  .++.+..++||.|.++.......   ..
T Consensus       147 g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~  226 (287)
T 3pxx_A          147 ASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFR  226 (287)
T ss_dssp             CEEEEECCHHHHHHHHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHC
T ss_pred             cEEEEeccchhcccccccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhc
Confidence            48999999776642222223343333445689999999999998887653  17999999999999874210000   00


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCc
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGT  157 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~  157 (208)
                      .................                .....+.+.+.+|+|++++.++... .....|+++++.+|..+
T Consensus       227 ~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~p~dva~~v~fL~s~~-a~~itG~~i~vdGG~~~  285 (287)
T 3pxx_A          227 PDLEAPSRADALLAFPA----------------MQAMPTPYVEASDISNAVCFLASDE-SRYVTGLQFKVDAGAML  285 (287)
T ss_dssp             TTSSSCCHHHHHHHGGG----------------GCSSSCSCBCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTGGG
T ss_pred             cccccchhHHHHhhhhh----------------hcccCCCCCCHHHHHhhHheecchh-hcCCCCceEeECchhhh
Confidence            00000000000000000                0111256899999999999998752 22366799999887654

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=97.91  E-value=7.8e-05  Score=57.65  Aligned_cols=118  Identities=11%  Similarity=0.019  Sum_probs=74.3

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGEDPRGIP   86 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~~~~~~~   86 (208)
                      .++|++||...+..           ..+...|+.+|.+.+.+.+.++.+.+++.+..++||.+..+..........   .
T Consensus       130 g~iv~isS~~~~~~-----------~~~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~---~  195 (254)
T 3kzv_A          130 GNVVFVSSDACNMY-----------FSSWGAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVG---P  195 (254)
T ss_dssp             CEEEEECCSCCCCS-----------SCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCC---T
T ss_pred             CeEEEEcCchhccC-----------CCCcchHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccC---c
Confidence            58999999766532           224568999999999999998877668999999999999875332111000   0


Q ss_pred             CChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           87 NNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        87 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                      ..... .........  +               ...+.+.+|+|++++.++....+....|+.+++.+++
T Consensus       196 ~~~~~~~~~~~~~~~--~---------------~~r~~~p~dva~~v~~L~s~~~~~~itG~~i~vdg~~  248 (254)
T 3kzv_A          196 SSMSAEQLKMFRGLK--E---------------NNQLLDSSVPATVYAKLALHGIPDGVNGQYLSYNDPA  248 (254)
T ss_dssp             TTSCHHHHHHHHHHH--T---------------TC----CHHHHHHHHHHHHHCCCGGGTTCEEETTCGG
T ss_pred             cccCHHHHHHHHHHH--h---------------cCCcCCcccHHHHHHHHHhhcccCCCCccEEEecCcc
Confidence            01111 221111111  1               1236788999999999998732234667888887654

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=97.91  E-value=4.4e-05  Score=58.86  Aligned_cols=115  Identities=13%  Similarity=0.039  Sum_probs=71.3

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      +.+..+||++||...+..           ..+...|+.+|.+.+.+.+.++.+.  .++.+++++||.+.++....    
T Consensus       130 ~~~~g~iv~isS~~~~~~-----------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----  194 (249)
T 2ew8_A          130 RNGWGRIINLTSTTYWLK-----------IEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEA----  194 (249)
T ss_dssp             HHTCEEEEEECCGGGGSC-----------CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC-----------
T ss_pred             HcCCeEEEEEcchhhccC-----------CCCchhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchh----
Confidence            345679999999887742           1235689999999999998887653  27999999999999863110    


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                         .    +..-...... .   +.           .....+.+.+|+|++++.++... .....|+.+++.+|.
T Consensus       195 ---~----~~~~~~~~~~-~---~~-----------~~~~~~~~p~dva~~~~~l~s~~-~~~~tG~~~~vdGG~  246 (249)
T 2ew8_A          195 ---S----ALSAMFDVLP-N---ML-----------QAIPRLQVPLDLTGAAAFLASDD-ASFITGQTLAVDGGM  246 (249)
T ss_dssp             -------------------C---TT-----------SSSCSCCCTHHHHHHHHHHTSGG-GTTCCSCEEEESSSC
T ss_pred             ---c----cccchhhHHH-H---hh-----------CccCCCCCHHHHHHHHHHHcCcc-cCCCCCcEEEECCCc
Confidence               0    0000000000 0   00           01124789999999999998753 223567899888764

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=97.91  E-value=1.9e-05  Score=61.14  Aligned_cols=120  Identities=8%  Similarity=-0.073  Sum_probs=72.2

Q ss_pred             CCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCC
Q 028478            6 CKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPR   83 (208)
Q Consensus         6 vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~   83 (208)
                      ..++|++||...+..           ..+...|+.+|.+.+.+.+.++.+.  .++.+++++||.+.++...        
T Consensus       131 ~g~iv~isS~~~~~~-----------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~--------  191 (256)
T 1geg_A          131 GGKIINACSQAGHVG-----------NPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWA--------  191 (256)
T ss_dssp             CEEEEEECCGGGTSC-----------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHH--------
T ss_pred             CCEEEEECchhhcCC-----------CCCchhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhh--------
Confidence            468999999765531           1124689999999999998876542  1799999999999885200        


Q ss_pred             CCCCChHHHHHHHHhCC-CCe-eEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           84 GIPNNLMPFVTQVAVGR-RPE-LTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        84 ~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                          .+...+... .+. ... ...+.      .......+.+.+|+|++++.++.... ....|+.+++.+|..
T Consensus       192 ----~~~~~~~~~-~~~~~~~~~~~~~------~~~p~~r~~~p~dvA~~v~~l~s~~~-~~~tG~~i~vdGG~~  254 (256)
T 1geg_A          192 ----EIDRQVSEA-AGKPLGYGTAEFA------KRITLGRLSEPEDVAACVSYLASPDS-DYMTGQSLLIDGGMV  254 (256)
T ss_dssp             ----HHHHHHHHH-HTCCTTHHHHHHH------TTCTTCSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESSSSS
T ss_pred             ----hhhhhcccc-ccCChHHHHHHHH------hcCCCCCCcCHHHHHHHHHHHhCccc-cCCCCCEEEeCCCcc
Confidence                000000000 000 000 00000      00111247899999999999987632 235678998887753

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=97.90  E-value=3.3e-05  Score=59.82  Aligned_cols=112  Identities=12%  Similarity=0.023  Sum_probs=72.8

Q ss_pred             CCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCC
Q 028478            5 GCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDP   82 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~   82 (208)
                      +..+||++||...+...           .+...|+.+|.+.+.+.+.++.+.  .++.+.+++||.+.++....      
T Consensus       148 ~~~~iv~isS~~~~~~~-----------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~------  210 (265)
T 2o23_A          148 QRGVIINTASVAAFEGQ-----------VGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTS------  210 (265)
T ss_dssp             CCEEEEEECCTHHHHCC-----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------
T ss_pred             CCcEEEEeCChhhcCCC-----------CCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccc------
Confidence            56689999998776421           235689999999999888876542  27999999999998863110      


Q ss_pred             CCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCc
Q 028478           83 RGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGT  157 (208)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~  157 (208)
                        ....   .........  ++              ...+++.+|+|++++.++..   ....++.+++.+|..+
T Consensus       211 --~~~~---~~~~~~~~~--~~--------------~~~~~~~~dva~~~~~l~~~---~~~~G~~i~vdgG~~~  261 (265)
T 2o23_A          211 --LPEK---VCNFLASQV--PF--------------PSRLGDPAEYAHLVQAIIEN---PFLNGEVIRLDGAIRM  261 (265)
T ss_dssp             -----------CHHHHTC--SS--------------SCSCBCHHHHHHHHHHHHHC---TTCCSCEEEESTTCCC
T ss_pred             --cCHH---HHHHHHHcC--CC--------------cCCCCCHHHHHHHHHHHhhc---CccCceEEEECCCEec
Confidence              0000   000111110  11              02368999999999999865   2356789999877643

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=97.89  E-value=4.1e-05  Score=59.18  Aligned_cols=110  Identities=10%  Similarity=0.041  Sum_probs=73.9

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC-CCccEEEEecccccCCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD-SEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      +.+..++|++||...+..           ..+...|+.+|.+.+.+.+.++.++ +.+.+..+.||.+..+         
T Consensus       141 ~~~~g~iv~isS~~~~~~-----------~~~~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~---------  200 (252)
T 3f1l_A          141 KSDAGSLVFTSSSVGRQG-----------RANWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTA---------  200 (252)
T ss_dssp             TSSSCEEEEECCGGGTSC-----------CTTCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSH---------
T ss_pred             HCCCCEEEEECChhhccC-----------CCCCchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCc---------
Confidence            345569999999766532           1235689999999999999998876 3478888998887764         


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHH
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVL  160 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~  160 (208)
                                +.......                 .....+...+|+|++++.++.... ....|+.+++.+|...++.
T Consensus       201 ----------~~~~~~~~-----------------~~~~~~~~p~dva~~~~~L~s~~~-~~itG~~i~vdgG~~~~~~  251 (252)
T 3f1l_A          201 ----------MRASAFPT-----------------EDPQKLKTPADIMPLYLWLMGDDS-RRKTGMTFDAQPGRKPGIS  251 (252)
T ss_dssp             ----------HHHHHCTT-----------------CCGGGSBCTGGGHHHHHHHHSGGG-TTCCSCEEESSCC------
T ss_pred             ----------hhhhhCCc-----------------cchhccCCHHHHHHHHHHHcCccc-cCCCCCEEEeCCCcCCCCC
Confidence                      22222111                 112236788999999999987632 2366799999888766554

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=97.89  E-value=3.9e-05  Score=60.05  Aligned_cols=115  Identities=9%  Similarity=-0.087  Sum_probs=75.7

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      +.+..+||++||...+..         .+..+...|+.+|.+.|.+++.++.++  .+ .+.+++|+.+.++...     
T Consensus       161 ~~~~~~iv~isS~~~~~~---------~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~-----  225 (279)
T 3ctm_A          161 KNGKGSLIITSSISGKIV---------NIPQLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITD-----  225 (279)
T ss_dssp             HHTCCEEEEECCCTTSCC------------CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTS-----
T ss_pred             hcCCCeEEEECchHhccC---------CCCCCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCcccccc-----
Confidence            356789999999776532         012345689999999999999988764  15 8999999999886311     


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                         ...   ...........  +               ...+++.+|+|++++.++.... ....|+.+++.+|..
T Consensus       226 ---~~~---~~~~~~~~~~~--p---------------~~~~~~~~dvA~~~~~l~s~~~-~~~tG~~i~vdgG~~  277 (279)
T 3ctm_A          226 ---FAS---KDMKAKWWQLT--P---------------LGREGLTQELVGGYLYLASNAS-TFTTGSDVVIDGGYT  277 (279)
T ss_dssp             ---SCC---HHHHHHHHHHS--T---------------TCSCBCGGGTHHHHHHHHSGGG-TTCCSCEEEESTTCC
T ss_pred             ---ccC---hHHHHHHHHhC--C---------------ccCCcCHHHHHHHHHHHhCccc-cCccCCEEEECCCee
Confidence               000   11111111111  0               1237889999999999997632 235678999987753

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=97.88  E-value=4.2e-05  Score=60.05  Aligned_cols=110  Identities=9%  Similarity=-0.008  Sum_probs=72.7

Q ss_pred             CCEEEEeccccccCCCCCCCCCCCCCCCCCC-hHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCC
Q 028478            6 CKNLVFSSSATVYGWPKVVPCTEEFPLEAMN-PYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDP   82 (208)
Q Consensus         6 vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~-~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~   82 (208)
                      +.+||++||...+....           ... .|+.+|.+.+.+.+.++.+.  .++.+++++||.+.++...       
T Consensus       160 ~g~iV~isS~~~~~~~~-----------~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~-------  221 (276)
T 2b4q_A          160 PARVINIGSVAGISAMG-----------EQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTR-------  221 (276)
T ss_dssp             CEEEEEECCGGGTCCCC-----------CSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTH-------
T ss_pred             CCEEEEECCHHHcCCCC-----------CCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchh-------
Confidence            37999999987764211           134 79999999999998887542  1799999999999886210       


Q ss_pred             CCCCCChHH-HHHHHHh-CCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           83 RGIPNNLMP-FVTQVAV-GRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        83 ~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                           .... ....... ... +               ...+.+.+|+|++++.++..+. ....|+.+++.+|.
T Consensus       222 -----~~~~~~~~~~~~~~~~-p---------------~~r~~~p~dvA~~v~~l~s~~~-~~~tG~~i~vdGG~  274 (276)
T 2b4q_A          222 -----HIANDPQALEADSASI-P---------------MGRWGRPEEMAALAISLAGTAG-AYMTGNVIPIDGGF  274 (276)
T ss_dssp             -----HHHHCHHHHHHHHHTS-T---------------TSSCCCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTT
T ss_pred             -----hcchhHHHHHHhhcCC-C---------------CCCcCCHHHHHHHHHHHhCccc-cCCCCCEEEeCCCc
Confidence                 0000 1111111 010 1               1237899999999999987632 23567899888764

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=97.87  E-value=3.8e-05  Score=59.88  Aligned_cols=113  Identities=8%  Similarity=-0.069  Sum_probs=74.2

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      .++|++||...+..           ..+...|+.+|.+.+.+.+.++.++  .++.+..++||.|..+......      
T Consensus       151 g~iv~isS~~~~~~-----------~~~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~------  213 (266)
T 4egf_A          151 GAIITVASAAALAP-----------LPDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVW------  213 (266)
T ss_dssp             EEEEEECCGGGTSC-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHT------
T ss_pred             eEEEEEcchhhccC-----------CCCChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhc------
Confidence            48999999877632           2235689999999999998887653  1799999999999885210000      


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCc
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGT  157 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~  157 (208)
                        . -..........                 .....+...+|+|++++.++... .....|+++++.+|..+
T Consensus       214 --~-~~~~~~~~~~~-----------------~p~~r~~~p~dva~~v~~L~s~~-~~~itG~~i~vdGG~~~  265 (266)
T 4egf_A          214 --G-DEAKSAPMIAR-----------------IPLGRFAVPHEVSDAVVWLASDA-ASMINGVDIPVDGGYTM  265 (266)
T ss_dssp             --C-SHHHHHHHHTT-----------------CTTSSCBCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTGGG
T ss_pred             --c-ChHHHHHHHhc-----------------CCCCCCcCHHHHHHHHHHHhCch-hcCccCcEEEECCCccC
Confidence              0 00011112111                 11223678999999999998763 22466799999877543

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=97.87  E-value=4.6e-06  Score=65.25  Aligned_cols=111  Identities=6%  Similarity=-0.088  Sum_probs=71.7

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      .+..+||++||...+..           ..+...|+.+|.+.+.+.+.++.++  .++.+.+++||.+.++...      
T Consensus       150 ~~~g~Iv~isS~~~~~~-----------~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~------  212 (266)
T 3grp_A          150 RRYGRIINITSIVGVVG-----------NPGQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTD------  212 (266)
T ss_dssp             HTCEEEEEECCC------------------CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHH------
T ss_pred             cCCcEEEEECCHHHcCC-----------CCCchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhh------
Confidence            35568999999765521           1234689999999999888877653  1799999999999885210      


Q ss_pred             CCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           82 PRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        82 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                            .+.. ........                 ...+.+...+|+|++++.++.... ....|+++++.+|.
T Consensus       213 ------~~~~~~~~~~~~~-----------------~p~~r~~~~edvA~~v~~L~s~~~-~~itG~~i~vdGG~  263 (266)
T 3grp_A          213 ------KLNEKQKEAIMAM-----------------IPMKRMGIGEEIAFATVYLASDEA-AYLTGQTLHINGGM  263 (266)
T ss_dssp             ------TCCHHHHHHHHTT-----------------CTTCSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTC
T ss_pred             ------ccCHHHHHHHHhc-----------------CCCCCCcCHHHHHHHHHHHhCccc-cCccCCEEEECCCe
Confidence                  0011 22222221                 112346789999999999987632 23567999998775

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=97.86  E-value=3.7e-05  Score=60.17  Aligned_cols=118  Identities=10%  Similarity=0.002  Sum_probs=72.9

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      .+..+||++||...+...           .+...|+.+|.+.+.+.+.++.+.  .++.+++++||.+.++.......  
T Consensus       148 ~~~g~iv~isS~~~~~~~-----------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--  214 (273)
T 1ae1_A          148 SQNGNVIFLSSIAGFSAL-----------PSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIK--  214 (273)
T ss_dssp             HTSEEEEEECCGGGTSCC-----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-----------
T ss_pred             cCCcEEEEEcCHhhcCCC-----------CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhh--
Confidence            456799999998877531           235689999999999998876543  27999999999999974211000  


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                       . .+.. ...........  +               ...+.+.+|+|++++.++... .....|+++++.+|.
T Consensus       215 -~-~~~~-~~~~~~~~~~~--p---------------~~r~~~p~dvA~~v~~l~s~~-~~~~tG~~i~vdGG~  267 (273)
T 1ae1_A          215 -K-NPHQ-KEEIDNFIVKT--P---------------MGRAGKPQEVSALIAFLCFPA-ASYITGQIIWADGGF  267 (273)
T ss_dssp             ------C-HHHHHHHHHHS--T---------------TCSCBCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTG
T ss_pred             -c-ccCc-HHHHHHHHhcC--C---------------CCCCcCHHHHHHHHHHHhCcc-ccCcCCCEEEECCCc
Confidence             0 0000 01111221111  1               123678999999999998652 223567899998775

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=97.86  E-value=1.7e-05  Score=62.96  Aligned_cols=116  Identities=12%  Similarity=-0.026  Sum_probs=76.3

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      +.+..+||++||...+.          .+..+...|+.+|.+.+.+.+.++.++  .++.+.+++||.|+++...     
T Consensus       167 ~~~~g~iV~isS~~~~~----------~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~-----  231 (293)
T 3rih_A          167 ASGRGRVILTSSITGPV----------TGYPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLV-----  231 (293)
T ss_dssp             HHSSCEEEEECCSBTTT----------BBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHH-----
T ss_pred             HcCCCEEEEEeChhhcc----------CCCCCCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchh-----
Confidence            34567999999976431          011235689999999999999877652  1799999999999996210     


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCc
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGT  157 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~  157 (208)
                            ...-.+........  ++               .-+...+|+|++++.++... .....|+++++.+|..+
T Consensus       232 ------~~~~~~~~~~~~~~--p~---------------~r~~~p~dvA~~v~fL~s~~-a~~itG~~i~vdGG~~~  284 (293)
T 3rih_A          232 ------DMGEEYISGMARSI--PM---------------GMLGSPVDIGHLAAFLATDE-AGYITGQAIVVDGGQVL  284 (293)
T ss_dssp             ------HTCHHHHHHHHTTS--TT---------------SSCBCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTTTC
T ss_pred             ------hccHHHHHHHHhcC--CC---------------CCCCCHHHHHHHHHHHhCcc-ccCCCCCEEEECCCccC
Confidence                  00011222232221  11               12567899999999998763 22366799999887654

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=97.86  E-value=2.1e-05  Score=61.68  Aligned_cols=112  Identities=13%  Similarity=0.029  Sum_probs=76.2

Q ss_pred             CCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCC
Q 028478            5 GCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDP   82 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~   82 (208)
                      +-.+||++||...+..           ..+...|+.+|.+.+.+.+.++.++  .++.+..++||.|..+...       
T Consensus       165 ~~g~iv~isS~~~~~~-----------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~-------  226 (281)
T 3ppi_A          165 ERGALVLTASIAGYEG-----------QIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIME-------  226 (281)
T ss_dssp             CCEEEEEECCGGGTSC-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH-------
T ss_pred             CCeEEEEEecccccCC-----------CCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhh-------
Confidence            3448999999877632           1235689999999998888776653  2799999999999875210       


Q ss_pred             CCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcC
Q 028478           83 RGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTS  158 (208)
Q Consensus        83 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s  158 (208)
                           .+.. .........  ++              ...+.+.+|+|++++.++..   ....|+++++.+|..++
T Consensus       227 -----~~~~~~~~~~~~~~--~~--------------~~~~~~pedvA~~v~~l~s~---~~~tG~~i~vdGG~~~~  279 (281)
T 3ppi_A          227 -----SVGEEALAKFAANI--PF--------------PKRLGTPDEFADAAAFLLTN---GYINGEVMRLDGAQRFT  279 (281)
T ss_dssp             -----TTCHHHHHHHHHTC--CS--------------SSSCBCHHHHHHHHHHHHHC---SSCCSCEEEESTTCCCC
T ss_pred             -----cccHHHHHHHHhcC--CC--------------CCCCCCHHHHHHHHHHHHcC---CCcCCcEEEECCCcccC
Confidence                 0111 222222221  11              13478999999999999976   24667999998887654

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=97.85  E-value=0.00015  Score=57.03  Aligned_cols=111  Identities=14%  Similarity=0.050  Sum_probs=73.3

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      .+||++||...+..           ..+...|+.+|.+.+.+.+.++.++  .++.+++++||.+.++....        
T Consensus       154 g~iv~isS~~~~~~-----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~--------  214 (285)
T 2p91_A          154 GAIVTLSYYGAEKV-----------VPHYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYS--------  214 (285)
T ss_dssp             CEEEEEECGGGTSB-----------CTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC----------
T ss_pred             CEEEEEccchhccC-----------CCCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhc--------
Confidence            58999999766532           1235689999999999998877653  27999999999999974211        


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                      . ..............  ++               ..+.+++|+|++++.++... .....|+.|++.++.
T Consensus       215 ~-~~~~~~~~~~~~~~--p~---------------~~~~~~~dva~~~~~l~s~~-~~~~tG~~~~vdgg~  266 (285)
T 2p91_A          215 I-TGFHLLMEHTTKVN--PF---------------GKPITIEDVGDTAVFLCSDW-ARAITGEVVHVDNGY  266 (285)
T ss_dssp             C-TTHHHHHHHHHHHS--TT---------------SSCCCHHHHHHHHHHHTSGG-GTTCCSCEEEESTTG
T ss_pred             c-cchHHHHHHHHhcC--CC---------------CCCcCHHHHHHHHHHHcCCc-ccCCCCCEEEECCCc
Confidence            0 01111222222211  11               12578999999999998653 223457889998774

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=97.84  E-value=3.9e-06  Score=65.82  Aligned_cols=112  Identities=13%  Similarity=0.040  Sum_probs=75.0

Q ss_pred             CCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCC
Q 028478            5 GCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDP   82 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~   82 (208)
                      +..+||++||...+..           ..+...|+.+|.+.+.+.+.++.++  .++.+..++||.+.++...       
T Consensus       153 ~~g~iV~isS~~~~~~-----------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~-------  214 (271)
T 4ibo_A          153 GYGKIVNIGSLTSELA-----------RATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQ-------  214 (271)
T ss_dssp             TCEEEEEECCGGGTSB-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGH-------
T ss_pred             CCcEEEEEccHHhCCC-----------CCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchh-------
Confidence            4458999999765521           2235689999999999999887653  1799999999999886210       


Q ss_pred             CCCCCChH--H-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCc
Q 028478           83 RGIPNNLM--P-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGT  157 (208)
Q Consensus        83 ~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~  157 (208)
                           .+.  + +........  +               ...+...+|+|++++.++... .....|+++++.+|...
T Consensus       215 -----~~~~~~~~~~~~~~~~--p---------------~~r~~~pedva~~v~~L~s~~-~~~itG~~i~vdGG~~~  269 (271)
T 4ibo_A          215 -----ALIDNPEFDAWVKART--P---------------AKRWGKPQELVGTAVFLSASA-SDYVNGQIIYVDGGMLS  269 (271)
T ss_dssp             -----HHHHCHHHHHHHHHHS--T---------------TCSCBCGGGGHHHHHHHHSGG-GTTCCSCEEEESTTGGG
T ss_pred             -----hcccCHHHHHHHHhcC--C---------------CCCCcCHHHHHHHHHHHhCcc-ccCCCCcEEEECCCeec
Confidence                 010  0 111222111  1               123678899999999988763 22356799999887644

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=97.84  E-value=0.00015  Score=55.80  Aligned_cols=112  Identities=14%  Similarity=0.024  Sum_probs=74.1

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      .++|++||...+..           ......|+.+|.+.+.+.+.++.++  .++.+..++||.+..+.....       
T Consensus       141 ~~iv~isS~~~~~~-----------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-------  202 (255)
T 3icc_A          141 SRIINISSAATRIS-----------LPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAEL-------  202 (255)
T ss_dssp             EEEEEECCGGGTSC-----------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTT-------
T ss_pred             CEEEEeCChhhccC-----------CCCcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhh-------
Confidence            37999999776632           1234689999999999998887653  279999999999988642211       


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                       ...  ..........                ...+.+...+|+|+++..++... .....|+++++.+|..
T Consensus       203 -~~~--~~~~~~~~~~----------------~~~~~~~~~~dva~~~~~l~s~~-~~~~tG~~i~vdgG~~  254 (255)
T 3icc_A          203 -LSD--PMMKQYATTI----------------SAFNRLGEVEDIADTAAFLASPD-SRWVTGQLIDVSGGSC  254 (255)
T ss_dssp             -TTS--HHHHHHHHHT----------------STTSSCBCHHHHHHHHHHHHSGG-GTTCCSCEEEESSSTT
T ss_pred             -ccc--HHHHHhhhcc----------------CCcCCCCCHHHHHHHHHHHhCcc-cCCccCCEEEecCCee
Confidence             000  1111211111                11234678999999999988652 2246679999987753

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=97.84  E-value=3.8e-05  Score=59.41  Aligned_cols=121  Identities=11%  Similarity=0.021  Sum_probs=75.1

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      .+..++|++||...+..           ..+...|+.+|.+.+.+.+.++.+.  .++.+++++||.++|+.....+   
T Consensus       122 ~~~g~iv~isS~~~~~~-----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~---  187 (254)
T 1zmt_A          122 RKSGHIIFITSATPFGP-----------WKELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFY---  187 (254)
T ss_dssp             HTCCEEEEECCSTTTSC-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSC---
T ss_pred             cCCcEEEEECCcccccC-----------CCCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccC---
Confidence            35569999999776532           1235689999999999998876653  1799999999999987421110   


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                      ........-..........  +               ...+...+|+|++++.++... .....|+.+++.+|..
T Consensus       188 ~T~~~~~~~~~~~~~~~~~--p---------------~~~~~~p~dvA~~v~~l~s~~-~~~~tG~~~~vdgG~~  244 (254)
T 1zmt_A          188 PTEPWKTNPEHVAHVKKVT--A---------------LQRLGTQKELGELVAFLASGS-CDYLTGQVFWLAGGFP  244 (254)
T ss_dssp             BHHHHTTCHHHHHHHHHHS--S---------------SSSCBCHHHHHHHHHHHHTTS-CGGGTTCEEEESTTCC
T ss_pred             CCcccccChHHHHHHhccC--C---------------CCCCcCHHHHHHHHHHHhCcc-cCCccCCEEEECCCch
Confidence            0000000001111111110  1               112678999999999998763 2235678999887753

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=97.83  E-value=2.9e-06  Score=66.69  Aligned_cols=116  Identities=9%  Similarity=-0.025  Sum_probs=74.8

Q ss_pred             CCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCC
Q 028478            5 GCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDP   82 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~   82 (208)
                      +..+||++||...+..           ......|+.+|.+.+.+.+.++.++  .++.+..++||.|.++......    
T Consensus       155 ~~g~iv~isS~~~~~~-----------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~----  219 (277)
T 4fc7_A          155 HGGVIVNITATLGNRG-----------QALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRL----  219 (277)
T ss_dssp             HCEEEEEECCSHHHHT-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHH----
T ss_pred             CCCEEEEECchhhCCC-----------CCCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhc----
Confidence            3458999999766532           1234689999999999998887653  1799999999999985200000    


Q ss_pred             CCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCc
Q 028478           83 RGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGT  157 (208)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~  157 (208)
                          ..............  +               ..-+...+|+|++++.++... .....|+++++.+|..+
T Consensus       220 ----~~~~~~~~~~~~~~--p---------------~~r~~~p~dvA~~v~fL~s~~-~~~itG~~i~vdGG~~~  272 (277)
T 4fc7_A          220 ----GGPQASLSTKVTAS--P---------------LQRLGNKTEIAHSVLYLASPL-ASYVTGAVLVADGGAWL  272 (277)
T ss_dssp             ----SCCHHHHHHHHHTS--T---------------TSSCBCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTHHH
T ss_pred             ----cCCHHHHHHHhccC--C---------------CCCCcCHHHHHHHHHHHcCCc-cCCcCCCEEEECCCccc
Confidence                00001122222211  1               123678999999999999752 22466799999877544

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=97.81  E-value=2.9e-05  Score=59.96  Aligned_cols=106  Identities=8%  Similarity=0.029  Sum_probs=70.6

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhc---CCCccEEEEecccccCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRS---DSEWKIILLRYFNPVGAHPSGKIGEDPR   83 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~iiR~~~i~G~~~~~~~~~~~~   83 (208)
                      .++|++||...+...           .+...|+.+|.+.+.+.+.++.+   + ++.+++++||.+.++.....     .
T Consensus       131 g~iv~isS~~~~~~~-----------~~~~~Y~~sK~a~~~~~~~la~~~~~~-gi~v~~v~Pg~v~t~~~~~~-----~  193 (254)
T 1sby_A          131 GIIANICSVTGFNAI-----------HQVPVYSASKAAVVSFTNSLAKLAPIT-GVTAYSINPGITRTPLVHTF-----N  193 (254)
T ss_dssp             EEEEEECCGGGTSCC-----------TTSHHHHHHHHHHHHHHHHHHHHHHHH-SEEEEEEEECSEESHHHHSC-----C
T ss_pred             CEEEEECchhhccCC-----------CCchHHHHHHHHHHHHHHHHHHHhccC-CeEEEEEecCCccCcccccc-----c
Confidence            479999998877421           23568999999999999988765   4 89999999999998621100     0


Q ss_pred             CCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCC
Q 028478           84 GIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTG  154 (208)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~  154 (208)
                      .... ...........                    ..+.+++|+|++++.++..    ...++.|++.+|
T Consensus       194 ~~~~-~~~~~~~~~~~--------------------~~~~~~~dvA~~i~~~~~~----~~~G~~~~v~gG  239 (254)
T 1sby_A          194 SWLD-VEPRVAELLLS--------------------HPTQTSEQCGQNFVKAIEA----NKNGAIWKLDLG  239 (254)
T ss_dssp             CGGG-SCTTHHHHHTT--------------------SCCEEHHHHHHHHHHHHHH----CCTTCEEEEETT
T ss_pred             hhhh-hhHHHHHHHhc--------------------CCCCCHHHHHHHHHHHHHc----CCCCCEEEEeCC
Confidence            0000 00011111111                    1234899999999999876    456789999876

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=97.81  E-value=5.8e-05  Score=58.02  Aligned_cols=112  Identities=9%  Similarity=-0.037  Sum_probs=73.5

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      .+..+||++||...+...           .+...|+.+|.+.+.+.+.++.+.  .++.+++++||.+.++....     
T Consensus       131 ~~~g~iv~isS~~~~~~~-----------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----  194 (246)
T 2uvd_A          131 QRHGRIVNIASVVGVTGN-----------PGQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDV-----  194 (246)
T ss_dssp             HTCEEEEEECCTHHHHCC-----------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSC-----
T ss_pred             cCCcEEEEECCHHhcCCC-----------CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhh-----
Confidence            456799999997654211           134689999999998888776542  17999999999998863210     


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                         ....   .........  +               ...+++.+|+|++++.++.... ....|+.+++.+|.
T Consensus       195 ---~~~~---~~~~~~~~~--p---------------~~~~~~~~dvA~~~~~l~s~~~-~~~tG~~~~vdgG~  244 (246)
T 2uvd_A          195 ---LDEN---IKAEMLKLI--P---------------AAQFGEAQDIANAVTFFASDQS-KYITGQTLNVDGGM  244 (246)
T ss_dssp             ---CCTT---HHHHHHHTC--T---------------TCSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTS
T ss_pred             ---cCHH---HHHHHHhcC--C---------------CCCCcCHHHHHHHHHHHcCchh-cCCCCCEEEECcCc
Confidence               0011   111221111  1               1237899999999999986532 23557899888764

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=97.80  E-value=4.8e-05  Score=58.98  Aligned_cols=117  Identities=5%  Similarity=-0.100  Sum_probs=75.5

Q ss_pred             CCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--C-CccEEEEecccccCCCCCCCCCCC
Q 028478            5 GCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--S-EWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~-~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      +..++|++||...+..           ......|+.+|.+.+.+.+.++.++  + ++.+..++||.+.++........ 
T Consensus       134 ~~g~iv~isS~~~~~~-----------~~~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~-  201 (257)
T 3imf_A          134 IKGNIINMVATYAWDA-----------GPGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWI-  201 (257)
T ss_dssp             CCCEEEEECCGGGGSC-----------CTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC------
T ss_pred             CCcEEEEECchhhccC-----------CCCcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhccc-
Confidence            3458999999876632           1235689999999999988876432  1 79999999999998742110000 


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcC
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTS  158 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s  158 (208)
                          ...   ....... .                .....+...+|+|++++.++.... ....|+.+++.+|..++
T Consensus       202 ----~~~---~~~~~~~-~----------------~p~~r~~~pedvA~~v~~L~s~~~-~~itG~~i~vdGG~~~~  253 (257)
T 3imf_A          202 ----SEE---MAKRTIQ-S----------------VPLGRLGTPEEIAGLAYYLCSDEA-AYINGTCMTMDGGQHLH  253 (257)
T ss_dssp             ------C---CSHHHHT-T----------------STTCSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTTTSC
T ss_pred             ----CHH---HHHHHHh-c----------------CCCCCCcCHHHHHHHHHHHcCchh-cCccCCEEEECCCcccC
Confidence                000   1111111 1                112247899999999999987632 23567999998887543

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.80  E-value=0.00015  Score=56.85  Aligned_cols=121  Identities=9%  Similarity=-0.055  Sum_probs=73.9

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      .++|++||...+...          ..+...|+.+|.+.+.+.+.++.+.  .++.+++++||.+.++....      ..
T Consensus       141 g~iv~isS~~~~~~~----------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~------~~  204 (280)
T 1xkq_A          141 GEIVNVSSIVAGPQA----------QPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNA------MG  204 (280)
T ss_dssp             CEEEEECCGGGSSSC----------CCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHH------TT
T ss_pred             CcEEEecCccccCCC----------CCcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccc------cc
Confidence            689999998776421          0234689999999999998887542  28999999999999862100      00


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                      .......-.........             .......+.+.+|+|++++.++..+......|+.+++.+|..
T Consensus       205 ~~~~~~~~~~~~~~~~~-------------~~~p~~~~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG~~  263 (280)
T 1xkq_A          205 MPDQASQKFYNFMASHK-------------ECIPIGAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTS  263 (280)
T ss_dssp             CCHHHHHHHHHHHHHCT-------------TTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             cccccccchHHHHHHHH-------------cCCCCCCCCCHHHHHHHHHHhcCcccccCccCCeEEECCCcc
Confidence            00000000000101000             011123478999999999999875301235678999987754

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=97.80  E-value=0.00015  Score=57.96  Aligned_cols=123  Identities=7%  Similarity=-0.072  Sum_probs=74.2

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCC--CCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKI--GEDP   82 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~--~~~~   82 (208)
                      .+||++||...+...           .....|+.+|.+.+.+.+.++.++  .++.+..++||.|.++......  ....
T Consensus       188 g~Iv~isS~~~~~~~-----------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~  256 (317)
T 3oec_A          188 GSVIFVSSTVGLRGA-----------PGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFL  256 (317)
T ss_dssp             EEEEEECCGGGSSCC-----------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHC
T ss_pred             CEEEEECcHHhcCCC-----------CCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhh
Confidence            479999998766321           234689999999999999887653  1799999999999986210000  0000


Q ss_pred             CCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           83 RGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                      ..................               ....+.+++.+|+|++++.++... .....|+++++.+|..
T Consensus       257 ~~~~~~~~~~~~~~~~~~---------------~~~p~~~~~pedvA~av~fL~s~~-a~~itG~~i~vdGG~~  314 (317)
T 3oec_A          257 PHLENPTREDAAELFSQL---------------TLLPIPWVEPEDVSNAVAWLASDE-ARYIHGAAIPVDGGQL  314 (317)
T ss_dssp             TTCSSCCHHHHHHHHTTT---------------CSSSSSSBCHHHHHHHHHHHTSGG-GTTCCSCEEEESTTGG
T ss_pred             hhccccchhHHHHHHhhh---------------ccCCCCCCCHHHHHHHHHHHcCCc-ccCCCCCEEEECcchh
Confidence            000000000001111110               111256889999999999988663 2235679999987753

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=97.78  E-value=6e-05  Score=58.88  Aligned_cols=109  Identities=10%  Similarity=-0.016  Sum_probs=69.9

Q ss_pred             EEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCCC
Q 028478            8 NLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRGI   85 (208)
Q Consensus         8 ~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~~   85 (208)
                      ++|++||...+...           .....|+.+|.+.+.+.+.++.++  .++.+..+.||.+..+....       ..
T Consensus       156 ~iv~isS~~~~~~~-----------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-------~~  217 (267)
T 3u5t_A          156 RIINMSTSQVGLLH-----------PSYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLE-------GK  217 (267)
T ss_dssp             EEEEECCTHHHHCC-----------TTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC---------------
T ss_pred             eEEEEeChhhccCC-----------CCchHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccc-------cC
Confidence            79999997665321           234689999999999999988764  27999999999998763110       00


Q ss_pred             CCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           86 PNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                      ...   ....... .                .....+...+|+|++++.++... .....|+++++.+|.
T Consensus       218 ~~~---~~~~~~~-~----------------~p~~r~~~pedvA~~v~~L~s~~-~~~itG~~i~vdGG~  266 (267)
T 3u5t_A          218 SDE---VRDRFAK-L----------------APLERLGTPQDIAGAVAFLAGPD-GAWVNGQVLRANGGI  266 (267)
T ss_dssp             ------CHHHHHT-S----------------STTCSCBCHHHHHHHHHHHHSTT-TTTCCSEEEEESSSC
T ss_pred             CHH---HHHHHHh-c----------------CCCCCCcCHHHHHHHHHHHhCcc-ccCccCCEEEeCCCc
Confidence            000   1111111 1                11234678999999999998752 223567899887663

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=97.78  E-value=0.00035  Score=56.15  Aligned_cols=60  Identities=15%  Similarity=0.064  Sum_probs=44.1

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGA   72 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~   72 (208)
                      +.+..++|++||+..+....          .....|+.||.+.|.+.+.++.+.  .++.+++++||.+.++
T Consensus       135 ~~~~g~iV~isS~~~~~~~~----------~~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~  196 (324)
T 3u9l_A          135 RQKHGLLIWISSSSSAGGTP----------PYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSG  196 (324)
T ss_dssp             HHTCEEEEEECCGGGTSCCC----------SSCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---
T ss_pred             hcCCCEEEEEecchhccCCC----------CcchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccC
Confidence            34667899999987763211          124679999999999999887762  1899999999999875

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=97.78  E-value=7.2e-05  Score=57.66  Aligned_cols=112  Identities=8%  Similarity=-0.116  Sum_probs=74.8

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      .+..+||++||...+..           ..+...|+.+|.+.+.+.+.++.++  .++.+..++||.+..+....     
T Consensus       132 ~~~g~iv~isS~~~~~~-----------~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~-----  195 (248)
T 3op4_A          132 KRQGRIINVGSVVGTMG-----------NAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKA-----  195 (248)
T ss_dssp             HTCEEEEEECCHHHHHC-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTT-----
T ss_pred             cCCCEEEEEcchhhcCC-----------CCCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhh-----
Confidence            34568999999766521           1235689999999998888877643  17999999999998863110     


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                         .   ............                 ..+.+.+.+|+|+++..++... .....|+++++.+|.
T Consensus       196 ---~---~~~~~~~~~~~~-----------------p~~r~~~p~dva~~v~~L~s~~-~~~itG~~i~vdgG~  245 (248)
T 3op4_A          196 ---L---NDEQRTATLAQV-----------------PAGRLGDPREIASAVAFLASPE-AAYITGETLHVNGGM  245 (248)
T ss_dssp             ---S---CHHHHHHHHHTC-----------------TTCSCBCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTS
T ss_pred             ---c---CHHHHHHHHhcC-----------------CCCCCcCHHHHHHHHHHHcCCc-cCCccCcEEEECCCe
Confidence               0   011222222211                 1234789999999999988763 223567999998775

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=97.75  E-value=5.2e-05  Score=59.85  Aligned_cols=118  Identities=9%  Similarity=-0.107  Sum_probs=71.2

Q ss_pred             CCEEEEeccccccCCC-CCCC-CCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CC--ccEEEEecccccCCCCCCCCC
Q 028478            6 CKNLVFSSSATVYGWP-KVVP-CTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SE--WKIILLRYFNPVGAHPSGKIG   79 (208)
Q Consensus         6 vk~~i~~SS~~vyg~~-~~~~-~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~--~~~~iiR~~~i~G~~~~~~~~   79 (208)
                      .+++|++||...+... .... ..+..+..+...|+.||.+.+.+.+.++.++  .+  +.+..++||.|..+....   
T Consensus       131 ~~riv~isS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~---  207 (291)
T 3rd5_A          131 TDRVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGA---  207 (291)
T ss_dssp             EEEEEEECCGGGTTCCCCSSCTTCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC------
T ss_pred             HhheeEeechhhccCCCCcccccccccCCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccc---
Confidence            3589999998877432 2212 2233444556789999999999998887654  13  899999999998763110   


Q ss_pred             CCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCC
Q 028478           80 EDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTG  154 (208)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~  154 (208)
                               ............  +.              .+-....+|+|++++.++..+   ...|+.+++.+|
T Consensus       208 ---------~~~~~~~~~~~~--~~--------------~~~~~~~~~~A~~~~~l~~~~---~~~G~~~~vdgG  254 (291)
T 3rd5_A          208 ---------SGRKLGDALMSA--AT--------------RVVATDADFGARQTLYAASQD---LPGDSFVGPRFG  254 (291)
T ss_dssp             ------------------------------------------CHHHHHHHHHHHHHHHSC---CCTTCEEEETTS
T ss_pred             ---------cchHHHHHHHHH--HH--------------HHHhCCHHHHHHHHHHHHcCC---CCCCceeCCccc
Confidence                     000010110000  11              122345899999999999883   356688877544

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=97.74  E-value=4.3e-05  Score=59.87  Aligned_cols=57  Identities=11%  Similarity=0.064  Sum_probs=43.8

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC----CCccEEEEecccccCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD----SEWKIILLRYFNPVGA   72 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~iiR~~~i~G~   72 (208)
                      .+||++||...+..         .+..+...|+.+|.+.+.+.+.++.+.    .++++.+++|+.+.++
T Consensus       165 g~iv~isS~~~~~~---------~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~  225 (279)
T 1xg5_A          165 GHIININSMSGHRV---------LPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQ  225 (279)
T ss_dssp             CEEEEECCGGGTSC---------CSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSS
T ss_pred             ceEEEEcChhhccc---------CCCCCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccch
Confidence            69999999887642         122335689999999999888776532    2799999999999875

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=97.74  E-value=2.4e-05  Score=61.07  Aligned_cols=112  Identities=8%  Similarity=-0.022  Sum_probs=73.5

Q ss_pred             cCCCCEEEEeccccc-cCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATV-YGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIG   79 (208)
Q Consensus         3 ~~~vk~~i~~SS~~v-yg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~   79 (208)
                      +.+..+||++||..+ +.           +..+...|+.+|.+.+.+.+.++.+.  .++.+++++||.+.++...    
T Consensus       147 ~~~~g~iv~isS~~~~~~-----------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~----  211 (267)
T 1vl8_A          147 ESDNPSIINIGSLTVEEV-----------TMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTE----  211 (267)
T ss_dssp             TCSSCEEEEECCGGGTCC-----------CSSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTH----
T ss_pred             HcCCcEEEEECCcchhcc-----------CCCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcccccc----
Confidence            456679999999763 21           11235689999999999998886652  1799999999999875210    


Q ss_pred             CCCCCCCCChH--H-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           80 EDPRGIPNNLM--P-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        80 ~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                              .+.  + .........  +               ...+...+|+|++++.++.... ....|+.+.+.+|.
T Consensus       212 --------~~~~~~~~~~~~~~~~--p---------------~~~~~~p~dvA~~v~~l~s~~~-~~itG~~i~vdGG~  264 (267)
T 1vl8_A          212 --------AVFSDPEKLDYMLKRI--P---------------LGRTGVPEDLKGVAVFLASEEA-KYVTGQIIFVDGGW  264 (267)
T ss_dssp             --------HHHTCHHHHHHHHHTC--T---------------TSSCBCGGGGHHHHHHHHSGGG-TTCCSCEEEESTTG
T ss_pred             --------ccccChHHHHHHHhhC--C---------------CCCCcCHHHHHHHHHHHcCccc-cCCcCCeEEECCCC
Confidence                    010  1 111221111  1               1236789999999999987632 23567888887764

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=97.72  E-value=0.00011  Score=55.84  Aligned_cols=59  Identities=8%  Similarity=-0.032  Sum_probs=41.7

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGA   72 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~   72 (208)
                      +.+..+||++||...+..           ..+...|+.+|.+.+.+.+.++.+.  .++.++++|||.+..+
T Consensus       126 ~~~~~~iv~isS~~~~~~-----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~  186 (234)
T 2ehd_A          126 RRGGGTIVNVGSLAGKNP-----------FKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTG  186 (234)
T ss_dssp             TTTCEEEEEECCTTTTSC-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC-----
T ss_pred             hCCCcEEEEECCchhcCC-----------CCCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCC
Confidence            456789999999876642           2235689999999998888776542  2799999999988764

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=97.71  E-value=0.00018  Score=56.30  Aligned_cols=94  Identities=12%  Similarity=0.030  Sum_probs=57.7

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      .+||++||...+..           ..+...|+.+|.+.+.+.+.++.+.  .++.+..++||.|..+...         
T Consensus       157 g~IV~isS~~~~~~-----------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~---------  216 (272)
T 4dyv_A          157 GRIINNGSISATSP-----------RPYSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQ---------  216 (272)
T ss_dssp             EEEEEECCSSTTSC-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC--------------
T ss_pred             cEEEEECchhhcCC-----------CCCchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhh---------
Confidence            48999999766532           2235689999999999998887653  1799999999999886211         


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcC
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLD  140 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  140 (208)
                                ....+.. ...         .......++.++|+|++++.++..+.
T Consensus       217 ----------~~~~~~~-~~~---------~~~~~~~~~~pedvA~~v~fL~s~~~  252 (272)
T 4dyv_A          217 ----------KMKAGVP-QAD---------LSIKVEPVMDVAHVASAVVYMASLPL  252 (272)
T ss_dssp             ---------------------------------------CHHHHHHHHHHHHHSCT
T ss_pred             ----------hhcccch-hhh---------hcccccCCCCHHHHHHHHHHHhCCCC
Confidence                      1000000 000         01112347899999999999999854

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=97.71  E-value=0.00025  Score=55.58  Aligned_cols=113  Identities=13%  Similarity=0.082  Sum_probs=75.5

Q ss_pred             CCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCC
Q 028478            6 CKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPR   83 (208)
Q Consensus         6 vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~   83 (208)
                      ..++|++||...+..           ..+...|+.+|.+.+.+.+.++.+.  .++.+.+++||.|..+....       
T Consensus       158 ~g~iv~isS~~~~~~-----------~~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~-------  219 (280)
T 3nrc_A          158 NASMVALTYIGAEKA-----------MPSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASG-------  219 (280)
T ss_dssp             TCEEEEEECGGGTSC-----------CTTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGG-------
T ss_pred             CCeEEEEeccccccC-----------CCCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhc-------
Confidence            358999999876632           2235689999999999998877652  17999999999999863211       


Q ss_pred             CCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           84 GIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                        ...............  +               ...+...+|+|++++.++... .....|+++++.+|..
T Consensus       220 --~~~~~~~~~~~~~~~--p---------------~~~~~~pedvA~~v~~l~s~~-~~~~tG~~i~vdgG~~  272 (280)
T 3nrc_A          220 --ISNFKKMLDYNAMVS--P---------------LKKNVDIMEVGNTVAFLCSDM-ATGITGEVVHVDAGYH  272 (280)
T ss_dssp             --CTTHHHHHHHHHHHS--T---------------TCSCCCHHHHHHHHHHTTSGG-GTTCCSCEEEESTTGG
T ss_pred             --CcchHHHHHHHHhcC--C---------------CCCCCCHHHHHHHHHHHhCcc-cCCcCCcEEEECCCcc
Confidence              011111222222211  1               123678899999999998763 2236679999987764

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=97.71  E-value=0.00022  Score=55.39  Aligned_cols=111  Identities=7%  Similarity=-0.110  Sum_probs=74.4

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      .+..++|++||...+..           ..+...|+.+|.+.+.+.+.++.++  .++.+.+++||.+.++...      
T Consensus       154 ~~~g~iv~isS~~~~~~-----------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~------  216 (267)
T 4iiu_A          154 RQGGRIITLSSVSGVMG-----------NRGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIE------  216 (267)
T ss_dssp             TSCEEEEEECCHHHHHC-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCC------
T ss_pred             CCCcEEEEEcchHhccC-----------CCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccc------
Confidence            45568999999766532           1235689999998888777766543  1799999999999986321      


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                            .............  +               ...+...+|+|++++.++... .....|+++++.+|.
T Consensus       217 ------~~~~~~~~~~~~~--p---------------~~~~~~~edva~~~~~L~s~~-~~~itG~~i~vdGG~  266 (267)
T 4iiu_A          217 ------MEESALKEAMSMI--P---------------MKRMGQAEEVAGLASYLMSDI-AGYVTRQVISINGGM  266 (267)
T ss_dssp             ------CCHHHHHHHHHTC--T---------------TCSCBCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTC
T ss_pred             ------ccHHHHHHHHhcC--C---------------CCCCcCHHHHHHHHHHHhCCc-ccCccCCEEEeCCCc
Confidence                  0112333333321  1               123678999999999998763 223667999997763

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=97.70  E-value=0.00025  Score=55.31  Aligned_cols=121  Identities=8%  Similarity=-0.083  Sum_probs=74.6

Q ss_pred             CCEEEEecccccc-CCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhc---CCCccEEEEecccccCCCCCCCCCCC
Q 028478            6 CKNLVFSSSATVY-GWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRS---DSEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         6 vk~~i~~SS~~vy-g~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      ..++|++||...+ +.            .....|+.+|.+.+.+.+.++.+   + ++.+.+++||.++++.....    
T Consensus       133 ~g~iv~isS~~~~~~~------------~~~~~Y~asKaa~~~~~~~la~e~~~~-gi~vn~v~Pg~v~t~~~~~~----  195 (270)
T 1yde_A          133 QGNVINISSLVGAIGQ------------AQAVPYVATKGAVTAMTKALALDESPY-GVRVNCISPGNIWTPLWEEL----  195 (270)
T ss_dssp             TCEEEEECCHHHHHCC------------TTCHHHHHHHHHHHHHHHHHHHHHGGG-TCEEEEEEECSBCCHHHHHH----
T ss_pred             CCEEEEEcCccccCCC------------CCCcccHHHHHHHHHHHHHHHHHhhhh-CcEEEEEEeCccccchhhhh----
Confidence            3589999997543 32            12457999999999999988754   4 89999999999998621000    


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHHH
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLE  161 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e  161 (208)
                       ..........+.......  +               ...+...+|+|++++.++..  .....|+.+++.+|..+....
T Consensus       196 -~~~~~~~~~~~~~~~~~~--p---------------~~r~~~p~dva~~v~~L~s~--~~~itG~~i~vdGG~~~~~~~  255 (270)
T 1yde_A          196 -AALMPDPRASIREGMLAQ--P---------------LGRMGQPAEVGAAAVFLASE--ANFCTGIELLVTGGAELGYGC  255 (270)
T ss_dssp             -HTTSSSHHHHHHHHHHTS--T---------------TSSCBCHHHHHHHHHHHHHH--CTTCCSCEEEESTTTTSCC--
T ss_pred             -hhcccchHHHHHHHhhcC--C---------------CCCCcCHHHHHHHHHHHccc--CCCcCCCEEEECCCeecccCc
Confidence             000000011111111111  1               12257899999999998875  234667899998887666544


Q ss_pred             HH
Q 028478          162 MV  163 (208)
Q Consensus       162 ~~  163 (208)
                      ..
T Consensus       256 ~~  257 (270)
T 1yde_A          256 KA  257 (270)
T ss_dssp             --
T ss_pred             Cc
Confidence            33

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=97.69  E-value=0.00023  Score=56.38  Aligned_cols=112  Identities=13%  Similarity=0.045  Sum_probs=75.0

Q ss_pred             EEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCCC
Q 028478            8 NLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRGI   85 (208)
Q Consensus         8 ~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~~   85 (208)
                      +||++||...+..           ......|+.+|.+.+.+.+.++.++  .++.+..++||.|.++....         
T Consensus       163 ~IV~isS~~~~~~-----------~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~---------  222 (296)
T 3k31_A          163 SILTLSYYGAEKV-----------VPHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSG---------  222 (296)
T ss_dssp             EEEEEECGGGTSC-----------CTTTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCS---------
T ss_pred             EEEEEEehhhccC-----------CCCchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhc---------
Confidence            8999999776532           2235789999999999998887653  27999999999999863210         


Q ss_pred             CCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCc
Q 028478           86 PNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGT  157 (208)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~  157 (208)
                      ...............  ++               .-+...+|+|++++.++... .....|+++++.+|..+
T Consensus       223 ~~~~~~~~~~~~~~~--p~---------------~r~~~pedvA~~v~fL~s~~-a~~itG~~i~vdGG~~~  276 (296)
T 3k31_A          223 ISDFHYILTWNKYNS--PL---------------RRNTTLDDVGGAALYLLSDL-GRGTTGETVHVDCGYHV  276 (296)
T ss_dssp             CHHHHHHHHHHHHHS--TT---------------SSCCCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTGGG
T ss_pred             ccchHHHHHHHHhcC--CC---------------CCCCCHHHHHHHHHHHcCCc-cCCccCCEEEECCCccc
Confidence            000111222222211  11               23567899999999999763 22466799999887644

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=97.69  E-value=0.00029  Score=54.62  Aligned_cols=112  Identities=9%  Similarity=0.026  Sum_probs=74.9

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      .+||++||...+..           ......|+.+|.+.+.+.+.++.++  .++.+..++||.+..+.....       
T Consensus       141 g~iv~isS~~~~~~-----------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-------  202 (266)
T 3oig_A          141 GSIVTLTYLGGELV-----------MPNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGI-------  202 (266)
T ss_dssp             EEEEEEECGGGTSC-----------CTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTC-------
T ss_pred             ceEEEEeccccccc-----------CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccc-------
Confidence            38999999776632           2235689999999999998887653  179999999999988632110       


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                        ..............  +               ...+...+|+|++++.++.... ....|+++++.+|..
T Consensus       203 --~~~~~~~~~~~~~~--~---------------~~~~~~p~dva~~v~~l~s~~~-~~~tG~~i~vdGG~~  254 (266)
T 3oig_A          203 --SDFNSILKDIEERA--P---------------LRRTTTPEEVGDTAAFLFSDMS-RGITGENLHVDSGFH  254 (266)
T ss_dssp             --TTHHHHHHHHHHHS--T---------------TSSCCCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTGG
T ss_pred             --cchHHHHHHHHhcC--C---------------CCCCCCHHHHHHHHHHHcCCch-hcCcCCEEEECCCeE
Confidence              11111222222211  1               1235789999999999998632 236679999987753

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=97.67  E-value=0.00037  Score=54.66  Aligned_cols=123  Identities=8%  Similarity=-0.067  Sum_probs=74.7

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCC--CCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIG--EDP   82 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~--~~~   82 (208)
                      .+||++||...+..           ......|+.+|.+.+.+.+.++.++  .++.+..+.||.|..+.......  ...
T Consensus       158 g~iv~isS~~~~~~-----------~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~  226 (286)
T 3uve_A          158 GSIILTSSVGGLKA-----------YPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFR  226 (286)
T ss_dssp             EEEEEECCGGGTSC-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHC
T ss_pred             cEEEEECchhhccC-----------CCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhcc
Confidence            48999999876632           1234689999999999998887653  17999999999999874210000  000


Q ss_pred             CCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           83 RGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                      ..................              .. ..+.+.+.+|+|++++.++... .....|+++++.+|..
T Consensus       227 ~~~~~~~~~~~~~~~~~~--------------~~-~p~r~~~p~dvA~~v~fL~s~~-a~~itG~~i~vdGG~~  284 (286)
T 3uve_A          227 PDLENPGPDDMAPICQMF--------------HT-LPIPWVEPIDISNAVLFFASDE-ARYITGVTLPIDAGSC  284 (286)
T ss_dssp             TTSSSCCHHHHHHHHHTT--------------CS-SSCSCBCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTGG
T ss_pred             ccccccchhhHHHHHHhh--------------hc-cCCCcCCHHHHHHHHHHHcCcc-ccCCcCCEEeECCccc
Confidence            000000000001110000              01 1145789999999999998763 2236679999987754

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=97.66  E-value=4.2e-05  Score=60.43  Aligned_cols=113  Identities=11%  Similarity=0.017  Sum_probs=72.3

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      .+..+||++||...+..           ......|+.+|.+.+.+.+.++.+.  .++.+..++||.|..+......   
T Consensus       165 ~~~g~IV~isS~~~~~~-----------~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~---  230 (287)
T 3rku_A          165 KNSGDIVNLGSIAGRDA-----------YPTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRY---  230 (287)
T ss_dssp             HTCCEEEEECCGGGTSC-----------CTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHT---
T ss_pred             cCCCeEEEECChhhcCC-----------CCCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccc---
Confidence            45568999999776532           2235689999999999999988763  2899999999999875100000   


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                           .............                    ...+..+|+|++++.++.... ....++++.+.+++.
T Consensus       231 -----~~~~~~~~~~~~~--------------------~~p~~pedvA~~v~~l~s~~~-~~i~g~~i~v~~g~~  279 (287)
T 3rku_A          231 -----RGNEEQAKNVYKD--------------------TTPLMADDVADLIVYATSRKQ-NTVIADTLIFPTNQA  279 (287)
T ss_dssp             -----TTCHHHHHHHHTT--------------------SCCEEHHHHHHHHHHHHTSCT-TEEEEEEEEEETTEE
T ss_pred             -----cCcHHHHHHhhcc--------------------cCCCCHHHHHHHHHHHhCCCC-CeEecceEEeeCCCC
Confidence                 0000011111111                    123488999999999998732 124467787776653

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=97.65  E-value=3e-05  Score=60.14  Aligned_cols=114  Identities=11%  Similarity=-0.022  Sum_probs=72.3

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      .+..+||++||...+..           ..+...|+.+|.+.+.+.+.++.+.  .++.+.+++|+.+..+....     
T Consensus       136 ~~~g~iv~isS~~~~~~-----------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~-----  199 (253)
T 2nm0_A          136 AKKGRVVLISSVVGLLG-----------SAGQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKV-----  199 (253)
T ss_dssp             HTCEEEEEECCCCCCCC-----------HHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC----------
T ss_pred             cCCCEEEEECchhhCCC-----------CCCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhh-----
Confidence            35669999999765421           1124579999999999998877653  27999999999987752110     


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCc
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGT  157 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~  157 (208)
                         ....   .........                 ....++..+|+|++++.++..+. ....|+.+.+.+|..+
T Consensus       200 ---~~~~---~~~~~~~~~-----------------p~~~~~~p~dvA~~i~~l~s~~~-~~~tG~~i~vdGG~~~  251 (253)
T 2nm0_A          200 ---LTDE---QRANIVSQV-----------------PLGRYARPEEIAATVRFLASDDA-SYITGAVIPVDGGLGM  251 (253)
T ss_dssp             ----------CHHHHHTTC-----------------TTCSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTTTC
T ss_pred             ---cCHH---HHHHHHhcC-----------------CCCCCcCHHHHHHHHHHHhCccc-cCCcCcEEEECCcccc
Confidence               0000   111111110                 01237899999999999987632 2356789988877543

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=97.64  E-value=0.00013  Score=56.88  Aligned_cols=58  Identities=9%  Similarity=0.082  Sum_probs=44.3

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGA   72 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~   72 (208)
                      .+..+||++||...+..           ......|+.+|.+.+.+.+.++.+.+++.+..++||.|..+
T Consensus       130 ~~~g~IV~isS~~~~~~-----------~~~~~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~  187 (264)
T 3tfo_A          130 QRSGQIINIGSIGALSV-----------VPTAAVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESE  187 (264)
T ss_dssp             HTCEEEEEECCGGGTCC-----------CTTCHHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC---
T ss_pred             CCCeEEEEEcCHHHccc-----------CCCChhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCc
Confidence            34568999999876632           12346799999999999999887766899999999999875

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=97.64  E-value=0.00034  Score=54.98  Aligned_cols=121  Identities=10%  Similarity=-0.067  Sum_probs=75.2

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      .+..+||++||...+..         .+..+...|+.+|.+.+.+.+.++.++  .++.+..++||.+..+......   
T Consensus       155 ~~~g~Iv~isS~~~~~~---------~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~---  222 (283)
T 3v8b_A          155 RGGGAIVVVSSINGTRT---------FTTPGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTK---  222 (283)
T ss_dssp             HTCEEEEEECCSBTTTB---------CCSTTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTT---
T ss_pred             cCCceEEEEcChhhccC---------CCCCCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccc---
Confidence            45568999999765421         012245689999999999999988764  2799999999999886422100   


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcce--eeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGV--RDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                       .   .  . .. .  ...  +.....      .....  ..+...+|+|++++.++... .....|+++++.+|.
T Consensus       223 -~---~--~-~~-~--~~~--~~~~~~------~~~p~~~~r~~~pedvA~~v~fL~s~~-a~~itG~~i~vdGG~  279 (283)
T 3v8b_A          223 -L---R--H-EE-E--TAI--PVEWPK------GQVPITDGQPGRSEDVAELIRFLVSER-ARHVTGSPVWIDGGQ  279 (283)
T ss_dssp             -B---C--C-HH-H--HSC--CCBCTT------CSCGGGTTCCBCHHHHHHHHHHHTSGG-GTTCCSCEEEESTTH
T ss_pred             -c---c--c-ch-h--hhh--hhhhhh------hcCccccCCCCCHHHHHHHHHHHcCcc-ccCCcCCEEEECcCc
Confidence             0   0  0 00 0  000  011000      01111  34678999999999998763 223567999887664

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=97.63  E-value=0.00029  Score=55.67  Aligned_cols=113  Identities=12%  Similarity=0.050  Sum_probs=73.8

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      .+||++||...+..           ......|+.+|.+.+.+.+.++.++  .++.+..++||.|.++....        
T Consensus       163 g~Iv~isS~~~~~~-----------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~--------  223 (293)
T 3grk_A          163 GSILTLTYYGAEKV-----------MPNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASG--------  223 (293)
T ss_dssp             EEEEEEECGGGTSB-----------CTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-------------
T ss_pred             CEEEEEeehhhccC-----------CCchHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhc--------
Confidence            38999999876642           1235789999999999998887653  17999999999999863211        


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCc
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGT  157 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~  157 (208)
                       ....-..........  +               ..-+...+|+|++++.++... .....|+.+++.+|..+
T Consensus       224 -~~~~~~~~~~~~~~~--p---------------~~r~~~pedvA~~v~~L~s~~-~~~itG~~i~vdGG~~~  277 (293)
T 3grk_A          224 -IGDFRYILKWNEYNA--P---------------LRRTVTIDEVGDVGLYFLSDL-SRSVTGEVHHADSGYHV  277 (293)
T ss_dssp             --CCHHHHHHHHHHHS--T---------------TSSCCCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTGGG
T ss_pred             -ccchHHHHHHHHhcC--C---------------CCCCCCHHHHHHHHHHHcCcc-ccCCcceEEEECCCccc
Confidence             011111222222211  1               123578899999999998763 23466799999887643

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=97.60  E-value=0.00061  Score=53.19  Aligned_cols=109  Identities=8%  Similarity=-0.000  Sum_probs=71.6

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      .++|++||....-          .+..+...|+.+|.+.+.+.+.++.++  .++.+..++||.|.++....      . 
T Consensus       159 g~iv~isS~~~~~----------~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~------~-  221 (271)
T 3v2g_A          159 GRIITIGSNLAEL----------VPWPGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPA------D-  221 (271)
T ss_dssp             CEEEEECCGGGTC----------CCSTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCS------S-
T ss_pred             CEEEEEeChhhcc----------CCCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccc------c-
Confidence            4899998854321          112245689999999999998887653  27999999999999874211      0 


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                        ...   ........  ++               ..+...+|+|++++.++... .....|+++++.+|.
T Consensus       222 --~~~---~~~~~~~~--~~---------------~r~~~pedvA~~v~fL~s~~-~~~itG~~i~vdGG~  269 (271)
T 3v2g_A          222 --GDH---AEAQRERI--AT---------------GSYGEPQDIAGLVAWLAGPQ-GKFVTGASLTIDGGA  269 (271)
T ss_dssp             --CSS---HHHHHHTC--TT---------------SSCBCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTT
T ss_pred             --chh---HHHHHhcC--CC---------------CCCCCHHHHHHHHHHHhCcc-cCCccCCEEEeCcCc
Confidence              011   11222211  11               12568899999999988652 223667999997764

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=97.59  E-value=0.00013  Score=57.29  Aligned_cols=124  Identities=16%  Similarity=-0.005  Sum_probs=72.9

Q ss_pred             CCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCC-C
Q 028478            5 GCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGE-D   81 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~-~   81 (208)
                      +..++|++||...+...          ..+...|+.+|.+.+.+.+.++.+.  .++.+.+++||.+.++........ .
T Consensus       155 ~~g~iv~isS~~~~~~~----------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~  224 (283)
T 1g0o_A          155 IGGRLILMGSITGQAKA----------VPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYI  224 (283)
T ss_dssp             TTCEEEEECCGGGTCSS----------CSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGS
T ss_pred             cCCeEEEEechhhccCC----------CCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhcc
Confidence            34699999997655311          0125689999999999998877542  179999999999988521000000 0


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                      ... ...-...........               ......+.+.+|+|++++.++.... ....|+.+++.+|.
T Consensus       225 ~~~-~~~~~~~~~~~~~~~---------------~~p~~r~~~p~dvA~~v~~l~s~~~-~~itG~~i~vdgG~  281 (283)
T 1g0o_A          225 PNG-ENLSNEEVDEYAAVQ---------------WSPLRRVGLPIDIARVVCFLASNDG-GWVTGKVIGIDGGA  281 (283)
T ss_dssp             TTC-TTCCHHHHHHHHHHH---------------SCTTCSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTC
T ss_pred             ccc-cccCHHHHHHHHhhc---------------CCCCCCCcCHHHHHHHHHHHhCccc-cCcCCCEEEeCCCc
Confidence            000 000000111111100               0011236789999999999997632 23567889887764

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=97.58  E-value=5.9e-05  Score=59.69  Aligned_cols=115  Identities=9%  Similarity=-0.073  Sum_probs=73.9

Q ss_pred             CCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCC
Q 028478            6 CKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPR   83 (208)
Q Consensus         6 vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~   83 (208)
                      ..++|++||...++            ......|+.+|.+.+.+.+.++.++  .++.++++||+.++|+....      .
T Consensus       151 ~~~iv~isS~~~~~------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~------~  212 (303)
T 1yxm_A          151 GGSIVNIIVPTKAG------------FPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVE------N  212 (303)
T ss_dssp             CEEEEEECCCCTTC------------CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGT------T
T ss_pred             CCeEEEEEeecccC------------CCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhh------h
Confidence            45899999976322            1234579999999999998887653  27999999999999972100      0


Q ss_pred             CCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcC
Q 028478           84 GIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTS  158 (208)
Q Consensus        84 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s  158 (208)
                      .  ..... ........                 .....+.+.+|+|++++.++.... ....|+.+++.+|..++
T Consensus       213 ~--~~~~~~~~~~~~~~-----------------~p~~~~~~~~dvA~~i~~l~~~~~-~~~~G~~~~v~gG~~~~  268 (303)
T 1yxm_A          213 Y--GSWGQSFFEGSFQK-----------------IPAKRIGVPEEVSSVVCFLLSPAA-SFITGQSVDVDGGRSLY  268 (303)
T ss_dssp             S--GGGGGGGGTTGGGG-----------------STTSSCBCTHHHHHHHHHHHSGGG-TTCCSCEEEESTTGGGC
T ss_pred             c--cccchHHHHHHHhc-----------------CcccCCCCHHHHHHHHHHHhCccc-ccCCCcEEEECCCeecc
Confidence            0  00000 11111110                 011237899999999999987632 23567999998886544

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=97.57  E-value=0.00071  Score=52.39  Aligned_cols=115  Identities=9%  Similarity=-0.114  Sum_probs=76.0

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC-CCccEEEEecccccCCCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD-SEWKIILLRYFNPVGAHPSGKIGEDP   82 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~iiR~~~i~G~~~~~~~~~~~   82 (208)
                      .+..++|++||...+....         ..+...|+.+|.+.+.+.+.++.++ +.+.+..+.||.+-.+..        
T Consensus       150 ~~~g~iv~isS~~~~~~~~---------~~~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~--------  212 (267)
T 3gdg_A          150 RGTGSLVITASMSGHIANF---------PQEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLS--------  212 (267)
T ss_dssp             HTCCEEEEECCGGGTSCCS---------SSCCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCG--------
T ss_pred             cCCceEEEEccccccccCC---------CCCCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchh--------
Confidence            3456899999976553210         1235689999999999999998876 237889999998877521        


Q ss_pred             CCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           83 RGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                          ..+...........                ...+.+.+.+|+|++++.++... .....|+.+++.+|..
T Consensus       213 ----~~~~~~~~~~~~~~----------------~~~~r~~~~~dva~~~~~l~s~~-~~~itG~~i~vdgG~~  265 (267)
T 3gdg_A          213 ----DFVPKETQQLWHSM----------------IPMGRDGLAKELKGAYVYFASDA-STYTTGADLLIDGGYT  265 (267)
T ss_dssp             ----GGSCHHHHHHHHTT----------------STTSSCEETHHHHHHHHHHHSTT-CTTCCSCEEEESTTGG
T ss_pred             ----hhCCHHHHHHHHhc----------------CCCCCCcCHHHHHhHhheeecCc-cccccCCEEEECCcee
Confidence                01111222222221                12234678999999999998752 2346679999987753

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.57  E-value=0.00042  Score=53.19  Aligned_cols=113  Identities=12%  Similarity=0.032  Sum_probs=74.0

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      +.+..++|++||...++.            .....|+.+|...+.+.+.++.+.  .++.+++++||.+..+...     
T Consensus       125 ~~~~g~iv~isS~~~~~~------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~-----  187 (245)
T 1uls_A          125 EKNPGSIVLTASRVYLGN------------LGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTA-----  187 (245)
T ss_dssp             TTCCEEEEEECCGGGGCC------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTS-----
T ss_pred             hcCCCEEEEEccchhcCC------------CCchhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchh-----
Confidence            346679999999874432            124689999999998888876542  1799999999999876311     


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                         ...   -..........  ++               ..+.+.+|+|++++.++.... ....|+.+++.+|..
T Consensus       188 ---~~~---~~~~~~~~~~~--p~---------------~~~~~~~dvA~~v~~l~s~~~-~~~tG~~~~vdgG~~  239 (245)
T 1uls_A          188 ---KVP---EKVREKAIAAT--PL---------------GRAGKPLEVAYAALFLLSDES-SFITGQVLFVDGGRT  239 (245)
T ss_dssp             ---SSC---HHHHHHHHHTC--TT---------------CSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTTT
T ss_pred             ---hcC---HHHHHHHHhhC--CC---------------CCCcCHHHHHHHHHHHhCchh-cCCcCCEEEECCCcc
Confidence               000   01122222211  11               126789999999999987632 235678898877653

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=97.56  E-value=0.00044  Score=53.68  Aligned_cols=125  Identities=8%  Similarity=-0.025  Sum_probs=74.3

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      .+..+||++||...+..           ......|+.+|.+.+.+.+.++.++  .++.+..++||.+.++.........
T Consensus       136 ~~~g~iv~isS~~~~~~-----------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~  204 (265)
T 3lf2_A          136 RADAAIVCVNSLLASQP-----------EPHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAR  204 (265)
T ss_dssp             STTEEEEEEEEGGGTSC-----------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC-
T ss_pred             cCCeEEEEECCcccCCC-----------CCCchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhh
Confidence            34458999999776532           1235689999999999998887653  1799999999999875210000000


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                      ... ....-.+........  .+             ....+...+|+|++++.++... .....|+.+++.+|..
T Consensus       205 ~~~-~~~~~~~~~~~~~~~--~~-------------p~~r~~~pedvA~~v~fL~s~~-~~~itG~~i~vdGG~~  262 (265)
T 3lf2_A          205 EER-ELDWAQWTAQLARNK--QI-------------PLGRLGKPIEAARAILFLASPL-SAYTTGSHIDVSGGLS  262 (265)
T ss_dssp             ------CHHHHHHHHHHHT--TC-------------TTCSCBCHHHHHHHHHHHHSGG-GTTCCSEEEEESSSCC
T ss_pred             hhh-ccCHHHHHHHHhhcc--CC-------------CcCCCcCHHHHHHHHHHHhCch-hcCcCCCEEEECCCCc
Confidence            000 000000111111110  01             1123678999999999998753 2246679999987753

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=97.55  E-value=0.00025  Score=55.42  Aligned_cols=119  Identities=13%  Similarity=-0.001  Sum_probs=73.9

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      .+||++||...+..           ......|+.+|.+.+.+.+.++.++  .++.+..++||.+..+...         
T Consensus       154 g~iv~isS~~~~~~-----------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~---------  213 (277)
T 3tsc_A          154 GSIILISSAAGMKM-----------QPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGS---------  213 (277)
T ss_dssp             EEEEEECCGGGTSC-----------CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGS---------
T ss_pred             CEEEEEccHhhCCC-----------CCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCccc---------
Confidence            48999999876632           1234679999999999999887653  2799999999999886310         


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                        ......................      ... ..-+.+.+|+|++++.++.... ....|+++++.+|.
T Consensus       214 --~~~~~~~~~~~~~~~~~~~~~~------~~~-p~r~~~pedvA~~v~~L~s~~~-~~itG~~i~vdGG~  274 (277)
T 3tsc_A          214 --GDMVTAVGQAMETNPQLSHVLT------PFL-PDWVAEPEDIADTVCWLASDES-RKVTAAQIPVDQGS  274 (277)
T ss_dssp             --HHHHHHHHHHHHTCGGGTTTTC------CSS-SCSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTG
T ss_pred             --chhhhhhhhcccccHHHHHHhh------hcc-CCCCCCHHHHHHHHHHHhCccc-cCCcCCEEeeCCCc
Confidence              0011111111111100000000      111 1237899999999999997632 23567999998764

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.54  E-value=0.00041  Score=52.88  Aligned_cols=99  Identities=12%  Similarity=-0.037  Sum_probs=61.9

Q ss_pred             CCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCC
Q 028478            6 CKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPR   83 (208)
Q Consensus         6 vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~   83 (208)
                      ..+||++||...+....    .+..+..+...|+.+|.+.+.+++.++.++  .++.+.+++|+.+.++.          
T Consensus       144 ~~~iv~isS~~~~~~~~----~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~----------  209 (250)
T 1yo6_A          144 RAAVITISSGLGSITDN----TSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNL----------  209 (250)
T ss_dssp             TCEEEEECCGGGCSTTC----CSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC--------------
T ss_pred             CcEEEEeccCccccCCc----ccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCC----------
Confidence            66999999987664221    112222456789999999999999887654  27999999999887751          


Q ss_pred             CCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEec
Q 028478           84 GIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLG  152 (208)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~  152 (208)
                               ..     .                   ..+++.+|+|++++.++..... ...++.+.+.
T Consensus       210 ---------~~-----~-------------------~~~~~~~~~a~~~~~~~~~~~~-~~~G~~~~~~  244 (250)
T 1yo6_A          210 ---------GG-----K-------------------NAALTVEQSTAELISSFNKLDN-SHNGRFFMRN  244 (250)
T ss_dssp             ------------------------------------------HHHHHHHHHHHTTCCG-GGTTCEEETT
T ss_pred             ---------CC-----C-------------------CCCCCHHHHHHHHHHHHhcccc-cCCCeEEEEC
Confidence                     00     0                   0246789999999999987321 1344555443

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=97.53  E-value=0.00048  Score=53.76  Aligned_cols=111  Identities=14%  Similarity=0.114  Sum_probs=72.1

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      .+||++||...+..           ..+...|+.+|.+.+.+.+.++.++  .++.+++++||.+.++....        
T Consensus       138 g~iv~isS~~~~~~-----------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~--------  198 (275)
T 2pd4_A          138 ASVLTLSYLGSTKY-----------MAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSG--------  198 (275)
T ss_dssp             EEEEEEECGGGTSB-----------CTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGG--------
T ss_pred             CEEEEEecchhcCC-----------CCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhh--------
Confidence            38999999766531           1234679999999999998887653  27999999999999863110        


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                       ...............  ++               .-+...+|+|++++.++... .....|+.+++.++.
T Consensus       199 -~~~~~~~~~~~~~~~--p~---------------~~~~~p~dva~~~~~l~s~~-~~~~tG~~~~vdgg~  250 (275)
T 2pd4_A          199 -IADFRMILKWNEINA--PL---------------RKNVSLEEVGNAGMYLLSSL-SSGVSGEVHFVDAGY  250 (275)
T ss_dssp             -STTHHHHHHHHHHHS--TT---------------SSCCCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTG
T ss_pred             -ccccHHHHHHHHhcC--Cc---------------CCCCCHHHHHHHHHHHhCcc-ccCCCCCEEEECCCc
Confidence             001111222222211  11               12568899999999998752 223566888887764

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=97.53  E-value=0.00019  Score=56.00  Aligned_cols=100  Identities=14%  Similarity=0.100  Sum_probs=65.9

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      +.+..+||++||...+..           ..+...|+.+|.+.+.+.+.++.++  .++.+.+++||.|.++....    
T Consensus       135 ~~~~g~IV~isS~~~~~~-----------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~----  199 (266)
T 3p19_A          135 ARNCGTIINISSIAGKKT-----------FPDHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSH----  199 (266)
T ss_dssp             HHTCCEEEEECCGGGTSC-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGG----
T ss_pred             hcCCcEEEEEcChhhCCC-----------CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhc----
Confidence            345679999999877632           1235689999999999998887652  27999999999999863210    


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhc
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKL  139 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  139 (208)
                         . ..   ..........  ..             ....+++.+|+|++++.++..+
T Consensus       200 ---~-~~---~~~~~~~~~~--~~-------------~~~r~~~pedvA~av~~l~~~~  236 (266)
T 3p19_A          200 ---T-TS---QQIKDGYDAW--RV-------------DMGGVLAADDVARAVLFAYQQP  236 (266)
T ss_dssp             ---C-SC---HHHHHHHHHH--HH-------------HTTCCBCHHHHHHHHHHHHHSC
T ss_pred             ---c-cc---hhhhHHHHhh--cc-------------cccCCCCHHHHHHHHHHHHcCC
Confidence               0 00   0111111100  00             0123688999999999999984

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=97.53  E-value=0.00047  Score=53.40  Aligned_cols=89  Identities=10%  Similarity=-0.027  Sum_probs=58.9

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      .+..+||++||...+..           ..+...|+.+|.+.+.+++.++.+.  .++.+.+++||.+..+.        
T Consensus       156 ~~~g~iv~isS~~~~~~-----------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~--------  216 (262)
T 3rkr_A          156 AKRGHIINISSLAGKNP-----------VADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEF--------  216 (262)
T ss_dssp             TTCCEEEEECSSCSSCC-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------
T ss_pred             CCCceEEEEechhhcCC-----------CCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCc--------
Confidence            45569999999766532           2335689999999999998887652  28999999999887752        


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhc
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKL  139 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  139 (208)
                                 ..... ..                .....++..+|+|+++..++..+
T Consensus       217 -----------~~~~~-~~----------------~~~~~~~~p~dvA~~v~~l~s~~  246 (262)
T 3rkr_A          217 -----------GVGLS-AK----------------KSALGAIEPDDIADVVALLATQA  246 (262)
T ss_dssp             ----------------------------------------CCCHHHHHHHHHHHHTCC
T ss_pred             -----------ccccc-cc----------------cccccCCCHHHHHHHHHHHhcCc
Confidence                       10100 00                11223678999999999999874

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=97.53  E-value=0.00028  Score=54.50  Aligned_cols=111  Identities=8%  Similarity=-0.024  Sum_probs=71.6

Q ss_pred             CCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCC
Q 028478            6 CKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPR   83 (208)
Q Consensus         6 vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~   83 (208)
                      -.++|++||...+..           ..+...|+.+|.+.+.+.+.++.++  .++.+..++||.|..+...        
T Consensus       142 ~g~iv~isS~~~~~~-----------~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~--------  202 (257)
T 3tl3_A          142 RGVIINTASVAAFDG-----------QIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLA--------  202 (257)
T ss_dssp             SEEEEEECCCC--CC-----------HHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---------
T ss_pred             CcEEEEEcchhhcCC-----------CCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhh--------
Confidence            348999999766531           1124589999999999888876653  2799999999999886311        


Q ss_pred             CCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcC
Q 028478           84 GIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTS  158 (208)
Q Consensus        84 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s  158 (208)
                          .+.. .........  ++              ...+.+.+|+|++++.++..   +...|+++++.+|..++
T Consensus       203 ----~~~~~~~~~~~~~~--~~--------------~~r~~~p~dva~~v~~l~s~---~~itG~~i~vdGG~~~~  255 (257)
T 3tl3_A          203 ----SLPEEARASLGKQV--PH--------------PSRLGNPDEYGALAVHIIEN---PMLNGEVIRLDGAIRMA  255 (257)
T ss_dssp             ------CHHHHHHHHHTS--SS--------------SCSCBCHHHHHHHHHHHHHC---TTCCSCEEEESTTC---
T ss_pred             ----hccHHHHHHHHhcC--CC--------------CCCccCHHHHHHHHHHHhcC---CCCCCCEEEECCCccCC
Confidence                1111 222222211  11              12367899999999999976   24677999998876544

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=97.52  E-value=3.9e-05  Score=59.13  Aligned_cols=111  Identities=12%  Similarity=-0.041  Sum_probs=71.8

Q ss_pred             CCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCC
Q 028478            6 CKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPR   83 (208)
Q Consensus         6 vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~   83 (208)
                      ..++|++||...+..           ..+...|+.+|.+.+.+.+.++.+.  .++.+..++||.+..+....       
T Consensus       132 ~g~iv~isS~~~~~~-----------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~-------  193 (247)
T 3rwb_A          132 AGRVISIASNTFFAG-----------TPNMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKA-------  193 (247)
T ss_dssp             CEEEEEECCTHHHHT-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-------
T ss_pred             CcEEEEECchhhccC-----------CCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccc-------
Confidence            458999999776532           1235689999999999998887652  18999999999998752110       


Q ss_pred             CCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           84 GIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                       ........+....  .  +               ...+...+|+|+++..++.... ....|+++++.+|.
T Consensus       194 -~~~~~~~~~~~~~--~--~---------------~~r~~~pedva~~v~~L~s~~~-~~itG~~i~vdGG~  244 (247)
T 3rwb_A          194 -SPHNEAFGFVEML--Q--A---------------MKGKGQPEHIADVVSFLASDDA-RWITGQTLNVDAGM  244 (247)
T ss_dssp             -SGGGGGHHHHHHH--S--S---------------SCSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTS
T ss_pred             -cChhHHHHHHhcc--c--c---------------cCCCcCHHHHHHHHHHHhCccc-cCCCCCEEEECCCc
Confidence             0000011010100  0  1               1235678999999999987632 23567999998765

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=97.52  E-value=8.7e-05  Score=57.72  Aligned_cols=111  Identities=8%  Similarity=-0.032  Sum_probs=66.9

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      .++|++||...+...           .....|+.+|.+.+.+.+.++.++  .++.+..+.||.+..+.           
T Consensus       141 g~iv~isS~~~~~~~-----------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~-----------  198 (262)
T 3ksu_A          141 GHIITIATSLLAAYT-----------GFYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSF-----------  198 (262)
T ss_dssp             EEEEEECCCHHHHHH-----------CCCCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHH-----------
T ss_pred             CEEEEEechhhccCC-----------CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcc-----------
Confidence            479999997766421           124579999999999999988764  27999999999887641           


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCc
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGT  157 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~  157 (208)
                              ........  ....+.      .......+...+|+|++++.++..  .....|+.+++.+|...
T Consensus       199 --------~~~~~~~~--~~~~~~------~~~~~~r~~~pedvA~~v~~L~s~--~~~itG~~i~vdGg~~~  253 (262)
T 3ksu_A          199 --------FYGQETKE--STAFHK------SQAMGNQLTKIEDIAPIIKFLTTD--GWWINGQTIFANGGYTT  253 (262)
T ss_dssp             --------HHTCC--------------------CCCCSCCGGGTHHHHHHHHTT--TTTCCSCEEEESTTCCC
T ss_pred             --------ccccCchH--HHHHHH------hcCcccCCCCHHHHHHHHHHHcCC--CCCccCCEEEECCCccC
Confidence                    10000000  000111      111223467889999999999875  33467899999877643

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=97.51  E-value=0.00083  Score=51.29  Aligned_cols=101  Identities=10%  Similarity=0.045  Sum_probs=69.8

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC----CCccEEEEecccccCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD----SEWKIILLRYFNPVGAHPSGKIGEDP   82 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~iiR~~~i~G~~~~~~~~~~~   82 (208)
                      .++|++||...+..           ..+...|+.+|.+.+.+.+.++.+.    .++.+++++||.+-.+          
T Consensus       127 g~iv~isS~~~~~~-----------~~~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~----------  185 (241)
T 1dhr_A          127 GLLTLAGAKAALDG-----------TPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTP----------  185 (241)
T ss_dssp             EEEEEECCGGGGSC-----------CTTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECH----------
T ss_pred             CEEEEECCHHHccC-----------CCCchHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCc----------
Confidence            38999999877642           1235689999999999999987754    1599999999988764          


Q ss_pred             CCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           83 RGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                               +.......                 .....++..+|+|++++.++... .....|+.+++.++.
T Consensus       186 ---------~~~~~~~~-----------------~~~~~~~~~~~vA~~v~~l~~~~-~~~~~G~~~~v~g~~  231 (241)
T 1dhr_A          186 ---------MNRKSMPE-----------------ADFSSWTPLEFLVETFHDWITGN-KRPNSGSLIQVVTTD  231 (241)
T ss_dssp             ---------HHHHHSTT-----------------SCGGGSEEHHHHHHHHHHHHTTT-TCCCTTCEEEEEEET
T ss_pred             ---------cccccCcc-----------------hhhccCCCHHHHHHHHHHHhcCC-CcCccceEEEEeCCC
Confidence                     22221111                 11123577899999999998763 223556888876544

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=97.50  E-value=0.00034  Score=53.09  Aligned_cols=85  Identities=15%  Similarity=0.040  Sum_probs=57.7

Q ss_pred             EEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCCC
Q 028478            8 NLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRGI   85 (208)
Q Consensus         8 ~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~~   85 (208)
                      ++|++||...+..           ..+...|+.+|.+.+.+.+.++.++  .++.+..++||.+..+.            
T Consensus       124 ~iv~isS~~~~~~-----------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~------------  180 (230)
T 3guy_A          124 NVVMIMSTAAQQP-----------KAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEF------------  180 (230)
T ss_dssp             EEEEECCGGGTSC-----------CTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC----------------
T ss_pred             eEEEEeecccCCC-----------CCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChH------------
Confidence            8999999877632           2235689999999999999988765  27999999999888752            


Q ss_pred             CCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhc
Q 028478           86 PNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKL  139 (208)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  139 (208)
                             ......                 ......++..+|+|++++.++.++
T Consensus       181 -------~~~~~~-----------------~~~~~~~~~~~dvA~~i~~l~~~~  210 (230)
T 3guy_A          181 -------WETSGK-----------------SLDTSSFMSAEDAALMIHGALANI  210 (230)
T ss_dssp             ------------------------------------CCCHHHHHHHHHHHCCEE
T ss_pred             -------HHhcCC-----------------CCCcccCCCHHHHHHHHHHHHhCc
Confidence                   111100                 011234789999999999999874

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=97.48  E-value=0.0004  Score=54.38  Aligned_cols=110  Identities=5%  Similarity=-0.090  Sum_probs=73.2

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      .++|++||...+....         ..+...|+.+|.+.+.+.+.++.++  .++.+..++||.|..+...         
T Consensus       162 g~iv~isS~~~~~~~~---------~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~---------  223 (276)
T 3r1i_A          162 GTIITTASMSGHIINI---------PQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVE---------  223 (276)
T ss_dssp             EEEEEECCGGGTSCCC---------SSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTG---------
T ss_pred             cEEEEECchHhcccCC---------CCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccc---------
Confidence            4799999976653211         1235689999999999999887762  1799999999999986311         


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                         .+...........  +               ..-+...+|+|++++.++... .....|+++++.+|.
T Consensus       224 ---~~~~~~~~~~~~~--p---------------~~r~~~pedvA~~v~fL~s~~-~~~itG~~i~vdGG~  273 (276)
T 3r1i_A          224 ---PLADYHALWEPKI--P---------------LGRMGRPEELTGLYLYLASAA-SSYMTGSDIVIDGGY  273 (276)
T ss_dssp             ---GGGGGHHHHGGGS--T---------------TSSCBCGGGSHHHHHHHHSGG-GTTCCSCEEEESTTT
T ss_pred             ---cchHHHHHHHhcC--C---------------CCCCcCHHHHHHHHHHHcCcc-ccCccCcEEEECcCc
Confidence               0111111121111  1               123678899999999998763 224667999998775

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=97.47  E-value=0.00014  Score=56.79  Aligned_cols=121  Identities=14%  Similarity=0.019  Sum_probs=72.1

Q ss_pred             EEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCCC
Q 028478            8 NLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRGI   85 (208)
Q Consensus         8 ~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~~   85 (208)
                      ++|++||.....          .+..+...|+.+|.+.+.+.+.++.++  .++.+..++||.+.++.............
T Consensus       147 ~iv~isS~~~~~----------~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~  216 (270)
T 3is3_A          147 RIVLTSSNTSKD----------FSVPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNG  216 (270)
T ss_dssp             EEEEECCTTTTT----------CCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTG
T ss_pred             eEEEEeCchhcc----------CCCCCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccc
Confidence            899999965221          122345689999999999999887653  27999999999999863110000000000


Q ss_pred             CCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           86 PNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                      ...............                ...+.+.+.+|+|++++.++... .....|+.+++.+|.
T Consensus       217 ~~~~~~~~~~~~~~~----------------~p~~r~~~p~dvA~~v~~L~s~~-~~~itG~~i~vdGG~  269 (270)
T 3is3_A          217 TSYTAEQRQQMAAHA----------------SPLHRNGWPQDVANVVGFLVSKE-GEWVNGKVLTLDGGA  269 (270)
T ss_dssp             GGSCHHHHHHHHHHH----------------STTCSCBCHHHHHHHHHHHTSGG-GTTCCSCEEEESTTC
T ss_pred             cccchHHHHHHHHhc----------------CCCCCCCCHHHHHHHHHHHcCCc-cCCccCcEEEeCCCC
Confidence            000011111111111                11223678999999999998752 223567999998764

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=97.44  E-value=0.0015  Score=51.50  Aligned_cols=109  Identities=6%  Similarity=-0.030  Sum_probs=71.7

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCC-ChHHHhHHHHHHHHHHHhhc----CCCccEEEEecccccCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAM-NPYGRTKLFIEEICRDVHRS----DSEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~-~~Y~~sK~~~E~~~~~~~~~----~~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      .++|++||...+...           ... ..|+.+|.+.+.+.+.++.+    + ++.+..++||.+.++....     
T Consensus       171 g~iv~isS~~~~~~~-----------~~~~~~Y~asKaa~~~~~~~la~e~~~~~-gi~vn~v~PG~v~T~~~~~-----  233 (297)
T 1d7o_A          171 GASISLTYIASERII-----------PGYGGGMSSAKAALESDTRVLAFEAGRKQ-NIRVNTISAGPLGSRAAKA-----  233 (297)
T ss_dssp             EEEEEEECGGGTSCC-----------TTCTTTHHHHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECCCBCCCSSC-----
T ss_pred             ceEEEEeccccccCC-----------CCcchHHHHHHHHHHHHHHHHHHHhCccc-CcEEEEEeccccccchhhh-----
Confidence            489999997655321           112 47999999999999887654    4 8999999999999874210     


Q ss_pred             CCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           82 PRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        82 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                           ....+ +........  ++               ..+...+|+|++++.++... .....|+.+++.+|.
T Consensus       234 -----~~~~~~~~~~~~~~~--p~---------------~r~~~pedvA~~v~~l~s~~-~~~itG~~i~vdgG~  285 (297)
T 1d7o_A          234 -----IGFIDTMIEYSYNNA--PI---------------QKTLTADEVGNAAAFLVSPL-ASAITGATIYVDNGL  285 (297)
T ss_dssp             -----CSHHHHHHHHHHHHS--SS---------------CCCBCHHHHHHHHHHHTSGG-GTTCCSCEEEESTTG
T ss_pred             -----ccccHHHHHHhhccC--CC---------------CCCCCHHHHHHHHHHHhCcc-ccCCCCCEEEECCCc
Confidence                 01122 222222211  11               12568899999999988752 223567899998774

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=97.44  E-value=0.0014  Score=51.88  Aligned_cols=123  Identities=11%  Similarity=0.000  Sum_probs=74.7

Q ss_pred             CCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCC---C
Q 028478            6 CKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIG---E   80 (208)
Q Consensus         6 vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~---~   80 (208)
                      ..+||++||...+..           ......|+.+|.+.+.+.+.++.++  .++.+..++||.|.++.......   .
T Consensus       170 ~g~Iv~isS~~~~~~-----------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~  238 (299)
T 3t7c_A          170 GGSIVFTSSIGGLRG-----------AENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMF  238 (299)
T ss_dssp             CEEEEEECCGGGTSC-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHH
T ss_pred             CcEEEEECChhhccC-----------CCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhh
Confidence            458999999876632           1235689999999999998887653  17999999999999874210000   0


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                      ...........+........               .. ...+...+|+|++++.++... .....|+++++.+|..
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~---------------~~-p~r~~~pedvA~~v~fL~s~~-a~~itG~~i~vdGG~~  297 (299)
T 3t7c_A          239 RPDLENPTVEDFQVASRQMH---------------VL-PIPYVEPADISNAILFLVSDD-ARYITGVSLPVDGGAL  297 (299)
T ss_dssp             CTTSSSCCHHHHHHHHHHHS---------------SS-SCSCBCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTGG
T ss_pred             hhhhccchhhHHHHHhhhhc---------------cc-CcCCCCHHHHHHHHHHHhCcc-cccCcCCEEeeCCCcc
Confidence            00000000000000000000               01 134789999999999999763 2235679999987754

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=97.42  E-value=0.00061  Score=54.74  Aligned_cols=110  Identities=11%  Similarity=-0.093  Sum_probs=73.8

Q ss_pred             CCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCC
Q 028478            6 CKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPR   83 (208)
Q Consensus         6 vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~   83 (208)
                      ..+||++||...+..           ..+...|+.+|.+.+.+.+.++.++  .++.+.+++||.|..+. .        
T Consensus       213 ~g~IV~isS~~~~~~-----------~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~--------  272 (328)
T 2qhx_A          213 NYSIINMVDAMTNQP-----------LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D--------  272 (328)
T ss_dssp             CEEEEEECCTTTTSC-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-C--------
T ss_pred             CcEEEEECchhhccC-----------CCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-c--------
Confidence            468999999776532           2235689999999999998887653  17999999999998862 1        


Q ss_pred             CCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           84 GIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                      .    +-..........  ++           +   .-+...+|+|++++.++... .....|+.+++.+|..
T Consensus       273 ~----~~~~~~~~~~~~--p~-----------~---~r~~~pedvA~~v~~l~s~~-~~~itG~~i~vdGG~~  324 (328)
T 2qhx_A          273 M----PPAVWEGHRSKV--PL-----------Y---QRDSSAAEVSDVVIFLCSSK-AKYITGTCVKVDGGYS  324 (328)
T ss_dssp             S----CHHHHHHHHTTC--TT-----------T---TSCBCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTGG
T ss_pred             c----cHHHHHHHHhhC--CC-----------C---CCCCCHHHHHHHHHHHhCcc-ccCccCcEEEECCCcc
Confidence            0    111222222211  11           1   02578999999999999752 2235678998887653

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=97.41  E-value=0.0011  Score=51.01  Aligned_cols=57  Identities=14%  Similarity=0.079  Sum_probs=45.1

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVG   71 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G   71 (208)
                      .+..+||++||...+..           ..+...|+.+|.+.+.+.+.++.+.  .++.+.+++||.+.|
T Consensus       124 ~~~g~iv~isS~~~~~~-----------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~g  182 (248)
T 3asu_A          124 RNHGHIINIGSTAGSWP-----------YAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGG  182 (248)
T ss_dssp             HTCCEEEEECCGGGTSC-----------CTTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC
T ss_pred             cCCceEEEEccchhccC-----------CCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccccc
Confidence            45679999999876532           1235689999999999999887653  279999999999995

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=97.40  E-value=0.00021  Score=54.77  Aligned_cols=116  Identities=9%  Similarity=-0.027  Sum_probs=72.4

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      +.+..+||++||...+..           ..+...|+.+|.+.+.+.+.++.+.  .++.+.+++||.+-.+...     
T Consensus       123 ~~~~g~iv~isS~~~~~~-----------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~-----  186 (244)
T 1zmo_A          123 AAGGASVIFITSSVGKKP-----------LAYNPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYF-----  186 (244)
T ss_dssp             HTTCEEEEEECCGGGTSC-----------CTTCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTB-----
T ss_pred             HcCCcEEEEECChhhCCC-----------CCCchHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccc-----
Confidence            345568999999877642           1235689999999999998876553  1799999999988775210     


Q ss_pred             CCCCCCCChH--HHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           81 DPRGIPNNLM--PFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        81 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                         . ...+.  ........... +               ..-+...+|+|++++.++... .....|+.+.+.+|.
T Consensus       187 ---~-~~~~~~~~~~~~~~~~~~-p---------------~~r~~~pe~vA~~v~~l~s~~-~~~~tG~~i~vdgG~  242 (244)
T 1zmo_A          187 ---P-TSDWENNPELRERVDRDV-P---------------LGRLGRPDEMGALITFLASRR-AAPIVGQFFAFTGGY  242 (244)
T ss_dssp             ---C-HHHHHHCHHHHHHHHHHC-T---------------TCSCBCHHHHHHHHHHHHTTT-TGGGTTCEEEESTTC
T ss_pred             ---c-cccccchHHHHHHHhcCC-C---------------CCCCcCHHHHHHHHHHHcCcc-ccCccCCEEEeCCCC
Confidence               0 00000  01111111000 1               112578899999999998762 223456888887653

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=97.39  E-value=0.00068  Score=52.97  Aligned_cols=58  Identities=19%  Similarity=0.121  Sum_probs=44.1

Q ss_pred             CCCC-EEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCC
Q 028478            4 HGCK-NLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGA   72 (208)
Q Consensus         4 ~~vk-~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~   72 (208)
                      .+.. +||++||...+..           ......|+.+|.+.+.+.+.++.+.  .++.+++++||.+.++
T Consensus       147 ~~~g~~IV~isS~~~~~~-----------~~~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~  207 (272)
T 2nwq_A          147 HGAGASIVNLGSVAGKWP-----------YPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESE  207 (272)
T ss_dssp             HCTTCEEEEECCGGGTSC-----------CTTCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC--
T ss_pred             cCCCcEEEEeCCchhccC-----------CCCCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCc
Confidence            3455 9999999876632           1234689999999999999987653  2799999999999886

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=97.37  E-value=0.00083  Score=52.76  Aligned_cols=108  Identities=12%  Similarity=-0.074  Sum_probs=72.3

Q ss_pred             CCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCC
Q 028478            6 CKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPR   83 (208)
Q Consensus         6 vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~   83 (208)
                      ..+||++||...+..           ..+...|+.+|.+.+.+.+.++.++  .++.+.+++||.+.++. .        
T Consensus       173 ~g~iv~isS~~~~~~-----------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~--------  232 (288)
T 2x9g_A          173 NLSIVNLCDAMVDQP-----------CMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A--------  232 (288)
T ss_dssp             CEEEEEECCTTTTSC-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T--------
T ss_pred             CeEEEEEecccccCC-----------CCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c--------
Confidence            458999999876632           2235689999999998888876553  17999999999999873 1        


Q ss_pred             CCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeee-eeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           84 GIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDY-IHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                      .    ............  ++           +    -+ ...+|+|++++.++... .....|+.+++.+|.
T Consensus       233 ~----~~~~~~~~~~~~--p~-----------~----r~~~~pedvA~~v~~l~s~~-~~~itG~~i~vdGG~  283 (288)
T 2x9g_A          233 M----GEEEKDKWRRKV--PL-----------G----RREASAEQIADAVIFLVSGS-AQYITGSIIKVDGGL  283 (288)
T ss_dssp             S----CHHHHHHHHHTC--TT-----------T----SSCCCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTG
T ss_pred             c----ChHHHHHHHhhC--CC-----------C----CCCCCHHHHHHHHHHHhCcc-ccCccCCEEEECcch
Confidence            0    011222222211  11           1    14 68899999999999763 223567888887764

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=97.37  E-value=4.8e-05  Score=59.66  Aligned_cols=115  Identities=10%  Similarity=-0.072  Sum_probs=71.7

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      .+..+||++||...+.           +..+...|+.+|.+.+.+.+.++.++  .++.+..++||.+..+....     
T Consensus       158 ~~~g~Iv~isS~~~~~-----------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-----  221 (275)
T 4imr_A          158 RKWGRVVSIGSINQLR-----------PKSVVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNAD-----  221 (275)
T ss_dssp             HTCEEEEEECCGGGTS-----------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHH-----
T ss_pred             cCCcEEEEECCHHhCC-----------CCCCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCccccc-----
Confidence            3456899999987663           12234579999999999998887654  27999999999998752000     


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCC
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTG  154 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~  154 (208)
                       ..  .............. .+               ..-+...+|+|++++.++... .....|+++++.+|
T Consensus       222 -~~--~~~~~~~~~~~~~~-~p---------------~~r~~~pedvA~~v~fL~s~~-a~~itG~~i~vdGG  274 (275)
T 4imr_A          222 -RR--AQDPEGWDEYVRTL-NW---------------MGRAGRPEEMVGAALFLASEA-CSFMTGETIFLTGG  274 (275)
T ss_dssp             -HH--HHCHHHHHHHHHHH-ST---------------TCSCBCGGGGHHHHHHHHSGG-GTTCCSCEEEESSC
T ss_pred             -cc--ccChHHHHHHHhhc-Cc---------------cCCCcCHHHHHHHHHHHcCcc-cCCCCCCEEEeCCC
Confidence             00  00000111111100 00               112567899999999998763 22356789988765

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=97.32  E-value=0.0012  Score=51.82  Aligned_cols=94  Identities=11%  Similarity=0.056  Sum_probs=61.4

Q ss_pred             CCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCC
Q 028478            6 CKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPR   83 (208)
Q Consensus         6 vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~   83 (208)
                      ..+||++||...+..           ..+...|+.+|.+.+.+.+.++.+.  .++.+..++||.|..+.          
T Consensus       165 ~g~IV~isS~~~~~~-----------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~----------  223 (281)
T 4dry_A          165 GGRIINNGSISAQTP-----------RPNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDM----------  223 (281)
T ss_dssp             CEEEEEECCGGGTCC-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC------------
T ss_pred             CcEEEEECCHHhCCC-----------CCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChh----------
Confidence            348999999766531           2345789999999999998887552  17999999999998752          


Q ss_pred             CCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhc
Q 028478           84 GIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKL  139 (208)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  139 (208)
                               .......    ..-..      .......++..+|+|++++.++..+
T Consensus       224 ---------~~~~~~~----~~~~~------~~~~~~~~~~pedvA~~v~fL~s~~  260 (281)
T 4dry_A          224 ---------TARMSTG----VLQAN------GEVAAEPTIPIEHIAEAVVYMASLP  260 (281)
T ss_dssp             --------------CE----EECTT------SCEEECCCBCHHHHHHHHHHHHHSC
T ss_pred             ---------hhhhcch----hhhhh------hcccccCCCCHHHHHHHHHHHhCCC
Confidence                     1111100    00000      0111223789999999999999984

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=97.29  E-value=0.0018  Score=50.03  Aligned_cols=58  Identities=10%  Similarity=-0.083  Sum_probs=45.3

Q ss_pred             CCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhc---CCCccEEEEecccccCC
Q 028478            6 CKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRS---DSEWKIILLRYFNPVGA   72 (208)
Q Consensus         6 vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~iiR~~~i~G~   72 (208)
                      ..+||++||...+....        +..+...|+.+|.+.|.+++.++.+   + ++.++++|||.+..+
T Consensus       165 ~~~iv~isS~~~~~~~~--------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~-gi~v~~v~Pg~v~t~  225 (267)
T 1sny_A          165 RAAIINMSSILGSIQGN--------TDGGMYAYRTSKSALNAATKSLSVDLYPQ-RIMCVSLHPGWVKTD  225 (267)
T ss_dssp             TCEEEEECCGGGCSTTC--------CSCCCHHHHHHHHHHHHHHHHHHHHHGGG-TCEEEEECCCSBCST
T ss_pred             CceEEEEecccccccCC--------CCCCchHHHHHHHHHHHHHHHHHHHhhcC-CcEEEEeCCcceecC
Confidence            46899999987764321        1124568999999999999988765   4 799999999998775

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=97.26  E-value=0.00041  Score=53.56  Aligned_cols=96  Identities=9%  Similarity=0.034  Sum_probs=54.4

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccE-EEEecccccCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKI-ILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~-~iiR~~~i~G~~~~~~~~~   80 (208)
                      .+..++|++||...+..           ......|+.+|.+.+.+.+.++.++  .++.+ .++.||.+..+....    
T Consensus       132 ~~~g~iv~isS~~~~~~-----------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~----  196 (252)
T 3h7a_A          132 HGQGKIFFTGATASLRG-----------GSGFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRE----  196 (252)
T ss_dssp             HTCEEEEEEEEGGGTCC-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC--------------
T ss_pred             cCCcEEEEECCHHHcCC-----------CCCCccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhc----
Confidence            34458999999766532           1235689999999999998887653  16888 789999887753110    


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhc
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKL  139 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  139 (208)
                              ...   ..       .....      .....+ +...+|+|++++.++..+
T Consensus       197 --------~~~---~~-------~~~~~------~~~~~~-~~~pedvA~~~~~l~s~~  230 (252)
T 3h7a_A          197 --------RRE---QM-------FGKDA------LANPDL-LMPPAAVAGAYWQLYQQP  230 (252)
T ss_dssp             ------------------------------------------CCHHHHHHHHHHHHHCC
T ss_pred             --------cch---hh-------hhhhh------hcCCcc-CCCHHHHHHHHHHHHhCc
Confidence                    000   00       00000      111223 789999999999999873

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=97.26  E-value=0.0028  Score=50.58  Aligned_cols=56  Identities=14%  Similarity=0.051  Sum_probs=38.0

Q ss_pred             CCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhh---cCCCccEEEEecccccCCC
Q 028478            6 CKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHR---SDSEWKIILLRYFNPVGAH   73 (208)
Q Consensus         6 vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~---~~~~~~~~iiR~~~i~G~~   73 (208)
                      -.+||++||...+...           .....|+.||.+.+.+.+.++.   .. ++.+++++||.|.++.
T Consensus       144 ~g~iV~isS~a~~~~~-----------~~~~~Y~aSKaal~~~~~~la~e~~~~-gi~v~~v~PG~v~T~~  202 (319)
T 3ioy_A          144 GGHVVNTASMAAFLAA-----------GSPGIYNTTKFAVRGLSESLHYSLLKY-EIGVSVLCPGLVKSYI  202 (319)
T ss_dssp             CCEEEEECCGGGTCCC-----------SSSHHHHHHHHHHHHHHHHHHHHHGGG-TCEEEEECCCCBC---
T ss_pred             CcEEEEecccccccCC-----------CCCHHHHHHHHHHHHHHHHHHHHhhhc-CCEEEEEEcCeEccCc
Confidence            4589999998776421           1246899999955555544432   23 7999999999998863

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=97.24  E-value=0.0017  Score=50.90  Aligned_cols=120  Identities=12%  Similarity=0.021  Sum_probs=74.1

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC-CCccEEEEecccccCCCCCCCC-CCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD-SEWKIILLRYFNPVGAHPSGKI-GEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~iiR~~~i~G~~~~~~~-~~~~~~   84 (208)
                      .++|++||...+..           ......|+.+|.+.+.+.+.++.++ +.+.+..+.||.+..+...... +.....
T Consensus       135 g~iv~isS~~~~~~-----------~~~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~  203 (281)
T 3zv4_A          135 GSVVFTISNAGFYP-----------NGGGPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQS  203 (281)
T ss_dssp             CEEEEECCGGGTSS-----------SSSCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC-----
T ss_pred             CeEEEEecchhccC-----------CCCCchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCccccccccccccc
Confidence            48999999766532           1234679999999999999998775 4589999999999886321100 000000


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                      ....  ..........  +               ..-+...+|+|++++.++..+......|+++++.+|..
T Consensus       204 ~~~~--~~~~~~~~~~--p---------------~~r~~~pedvA~~v~fL~s~~~~~~itG~~i~vdGG~~  256 (281)
T 3zv4_A          204 ISSV--PLADMLKSVL--P---------------IGRMPALEEYTGAYVFFATRGDSLPATGALLNYDGGMG  256 (281)
T ss_dssp             ---C--CHHHHHHHTC--T---------------TSSCCCGGGGSHHHHHHHSTTTSTTCSSCEEEESSSGG
T ss_pred             ccch--hHHHHHHhcC--C---------------CCCCCCHHHHHHHHHHhhcccccccccCcEEEECCCCc
Confidence            0000  0111111111  1               12367889999999999985444446789999987753

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=97.23  E-value=0.00086  Score=51.63  Aligned_cols=89  Identities=12%  Similarity=-0.001  Sum_probs=59.8

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      .+..++|++||...+..           ..+...|+.+|.+.+.+.+.++.++  .++.+..++||.+..+         
T Consensus       135 ~~~g~iv~isS~~~~~~-----------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~---------  194 (250)
T 3nyw_A          135 QKNGYIFNVASRAAKYG-----------FADGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTD---------  194 (250)
T ss_dssp             HTCEEEEEECC------------------CCTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSH---------
T ss_pred             CCCeEEEEEccHHhcCC-----------CCCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCc---------
Confidence            34558999999665421           1235689999999999998877653  2799999999988774         


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhc
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKL  139 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  139 (208)
                                +.....  .  ..             ....++..+|+|++++.++..+
T Consensus       195 ----------~~~~~~--~--~~-------------~~~~~~~p~dva~~v~~l~s~~  225 (250)
T 3nyw_A          195 ----------MAKKAG--T--PF-------------KDEEMIQPDDLLNTIRCLLNLS  225 (250)
T ss_dssp             ----------HHHHTT--C--CS-------------CGGGSBCHHHHHHHHHHHHTSC
T ss_pred             ----------hhhhcC--C--Cc-------------ccccCCCHHHHHHHHHHHHcCC
Confidence                      222211  1  11             1234789999999999999874

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=97.22  E-value=0.00079  Score=51.45  Aligned_cols=101  Identities=11%  Similarity=-0.003  Sum_probs=68.1

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC---CCccEEEEecccccCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD---SEWKIILLRYFNPVGAHPSGKIG   79 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~iiR~~~i~G~~~~~~~~   79 (208)
                      +.+..++|++||...+..           ..+...|+.+|.+.+.+.+.++.+.   .++.+..+.||.+-.+       
T Consensus       143 ~~~~~~iv~isS~~~~~~-----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~-------  204 (247)
T 3i1j_A          143 RSEDASIAFTSSSVGRKG-----------RANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTG-------  204 (247)
T ss_dssp             TSSSEEEEEECCGGGTSC-----------CTTCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSH-------
T ss_pred             hCCCCeEEEEcchhhcCC-----------CCCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCc-------
Confidence            345568999999766532           2235689999999999999887653   2789999999888764       


Q ss_pred             CCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEe
Q 028478           80 EDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNL  151 (208)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni  151 (208)
                                  +.......                 .....+...+|+|++++.++... .....|+.+++
T Consensus       205 ------------~~~~~~~~-----------------~~~~~~~~p~dva~~~~~l~s~~-~~~itG~~i~~  246 (247)
T 3i1j_A          205 ------------MRAQAYPD-----------------ENPLNNPAPEDIMPVYLYLMGPD-STGINGQALNA  246 (247)
T ss_dssp             ------------HHHHHSTT-----------------SCGGGSCCGGGGTHHHHHHHSGG-GTTCCSCEEEC
T ss_pred             ------------cchhcccc-----------------cCccCCCCHHHHHHHHHHHhCch-hccccCeeecC
Confidence                        32222211                 11123567899999999998762 22355666654

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=97.17  E-value=0.00078  Score=52.02  Aligned_cols=73  Identities=11%  Similarity=-0.086  Sum_probs=53.4

Q ss_pred             CCChHHHhHHHHHHHHHHHhhc-------CCCccEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCeeEE
Q 028478           34 AMNPYGRTKLFIEEICRDVHRS-------DSEWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTV  106 (208)
Q Consensus        34 p~~~Y~~sK~~~E~~~~~~~~~-------~~~~~~~iiR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (208)
                      |.+.|+.+|.+.|.+++.++.+       . ++.+.+++||.|.++...                       .       
T Consensus       189 ~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~-~i~v~~v~PG~v~t~~~~-----------------------~-------  237 (276)
T 1wma_A          189 PSSAYGVTKIGVTVLSRIHARKLSEQRKGD-KILLNACCPGWVRTDMAG-----------------------P-------  237 (276)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHHHHHHHCTTS-CCEEEEEECCSBCSTTTC-----------------------T-------
T ss_pred             ccchhHHHHHHHHHHHHHHHHHhhcccCCC-ceEEEEecCCccccCcCC-----------------------c-------
Confidence            4589999999999999887765       4 799999999998875200                       0       


Q ss_pred             EccccCCCCCcceeeeeeHHHHHHHHHHHhhhcC-CCCCCCceEE
Q 028478          107 FGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLD-DPKIGCEVYN  150 (208)
Q Consensus       107 ~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~-~~~~~~~~~n  150 (208)
                                   ..+.+.+|+|++++.++..+. .....|+.|.
T Consensus       238 -------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~  269 (276)
T 1wma_A          238 -------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVS  269 (276)
T ss_dssp             -------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE
T ss_pred             -------------cccCChhHhhhhHhhhhcCcccccccCceEec
Confidence                         014688999999999998642 1234455554

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.14  E-value=0.00058  Score=53.03  Aligned_cols=110  Identities=15%  Similarity=0.067  Sum_probs=73.2

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      .+||++||...++.            .+...|+.+|.+.+.+.+.++.+.  .++.+++++||.+.++...        .
T Consensus       130 g~iv~isS~~~~~~------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~--------~  189 (263)
T 2a4k_A          130 GSLVLTGSVAGLGA------------FGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTA--------G  189 (263)
T ss_dssp             CEEEEECCCTTCCH------------HHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGT--------T
T ss_pred             CEEEEEecchhcCC------------CCcHHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhh--------h
Confidence            48999999877621            124579999999998888776542  2799999999999986311        0


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCc
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGT  157 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~  157 (208)
                      ..   -..........  +               ...+.+.+|+|++++.++.... ....|+.+++.++..+
T Consensus       190 ~~---~~~~~~~~~~~--p---------------~~~~~~p~dvA~~v~~l~s~~~-~~~tG~~i~vdgG~~~  241 (263)
T 2a4k_A          190 LP---PWAWEQEVGAS--P---------------LGRAGRPEEVAQAALFLLSEES-AYITGQALYVDGGRSI  241 (263)
T ss_dssp             SC---HHHHHHHHHTS--T---------------TCSCBCHHHHHHHHHHHHSGGG-TTCCSCEEEESTTTTT
T ss_pred             cC---HHHHHHHHhcC--C---------------CCCCcCHHHHHHHHHHHhCccc-cCCcCCEEEECCCccc
Confidence            00   01222222211  1               1236789999999999987632 2356789999877654

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=97.12  E-value=0.0022  Score=50.24  Aligned_cols=85  Identities=12%  Similarity=-0.047  Sum_probs=61.0

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC----CCccEEEEecccccCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD----SEWKIILLRYFNPVGAHPSGKIGEDP   82 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~iiR~~~i~G~~~~~~~~~~~   82 (208)
                      .+||++||...+..           ..+...|+.+|.+.+.+++.++.++    .++.+++++||.+..+          
T Consensus       157 g~iv~isS~~~~~~-----------~~~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~----------  215 (286)
T 1xu9_A          157 GSIVVVSSLAGKVA-----------YPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTE----------  215 (286)
T ss_dssp             CEEEEEEEGGGTSC-----------CTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCH----------
T ss_pred             CEEEEECCcccccC-----------CCCccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCCh----------
Confidence            58999999876532           1235689999999999988776542    3799999999988764          


Q ss_pred             CCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhh
Q 028478           83 RGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHK  138 (208)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  138 (208)
                               +......+                 .....+++.+|+|+.++.+++.
T Consensus       216 ---------~~~~~~~~-----------------~~~~~~~~~~~vA~~i~~~~~~  245 (286)
T 1xu9_A          216 ---------TAMKAVSG-----------------IVHMQAAPKEECALEIIKGGAL  245 (286)
T ss_dssp             ---------HHHHHSCG-----------------GGGGGCBCHHHHHHHHHHHHHT
T ss_pred             ---------hHHHhccc-----------------cccCCCCCHHHHHHHHHHHHhc
Confidence                     22221111                 1123468999999999999987

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=97.10  E-value=0.0031  Score=48.58  Aligned_cols=56  Identities=11%  Similarity=-0.024  Sum_probs=43.8

Q ss_pred             CCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCC
Q 028478            6 CKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGA   72 (208)
Q Consensus         6 vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~   72 (208)
                      ..+||++||...+..           ..+...|+.+|.+.+.+.+.++.++.++.+..+.||.+-.+
T Consensus       148 ~g~iv~isS~~~~~~-----------~~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~  203 (259)
T 1oaa_A          148 SKTVVNISSLCALQP-----------YKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDND  203 (259)
T ss_dssp             EEEEEEECCGGGTSC-----------CTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSH
T ss_pred             CceEEEEcCchhcCC-----------CCCccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcc
Confidence            357999999877632           22356899999999999999988874588888998877653

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=97.09  E-value=0.0019  Score=50.66  Aligned_cols=103  Identities=12%  Similarity=-0.041  Sum_probs=66.6

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      +.+..++|++||...+...          ..+...|+.+|.+.+.+.+.++.+.  .++.+..+.||.+....       
T Consensus       141 ~~~~g~iv~isS~~~~~~~----------~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~-------  203 (285)
T 3sc4_A          141 GRDNPHILTLSPPIRLEPK----------WLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATA-------  203 (285)
T ss_dssp             TSSSCEEEECCCCCCCSGG----------GSCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCH-------
T ss_pred             HcCCcEEEEECChhhccCC----------CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccH-------
Confidence            3455699999997654311          0234689999999999999887763  17999999998543320       


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEe
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNL  151 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni  151 (208)
                                 +......... +               ..-+...+|+|++++.++..+.  ...|+.+.+
T Consensus       204 -----------~~~~~~~~~~-~---------------~~r~~~pedvA~~~~~l~s~~~--~~tG~~i~~  245 (285)
T 3sc4_A          204 -----------AVQNLLGGDE-A---------------MARSRKPEVYADAAYVVLNKPS--SYTGNTLLC  245 (285)
T ss_dssp             -----------HHHHHHTSCC-C---------------CTTCBCTHHHHHHHHHHHTSCT--TCCSCEEEH
T ss_pred             -----------HHHhhccccc-c---------------ccCCCCHHHHHHHHHHHhCCcc--cccceEEEE
Confidence                       3333333221 1               1235688999999999998732  334455544

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=97.03  E-value=0.0002  Score=55.84  Aligned_cols=87  Identities=9%  Similarity=-0.023  Sum_probs=62.6

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC-----CCccEEEEecccccCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD-----SEWKIILLRYFNPVGAHPSGK   77 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~~iiR~~~i~G~~~~~~   77 (208)
                      +.+..+||++||...+..           ..+...|+.+|.+.|.+++.++.++     .++.++++||+.+.++...  
T Consensus       156 ~~~~~~iv~isS~~~~~~-----------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~--  222 (272)
T 1yb1_A          156 KNNHGHIVTVASAAGHVS-----------VPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIK--  222 (272)
T ss_dssp             HTTCEEEEEECCCC-CCC-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTT--
T ss_pred             hcCCCEEEEEechhhcCC-----------CCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccc--
Confidence            356679999999877642           1124679999999999998877642     2799999999999886210  


Q ss_pred             CCCCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhh
Q 028478           78 IGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHK  138 (208)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  138 (208)
                            .               .               ......+++.+|+|++++.++..
T Consensus       223 ------~---------------~---------------~~~~~~~~~~~dva~~i~~~~~~  247 (272)
T 1yb1_A          223 ------N---------------P---------------STSLGPTLEPEEVVNRLMHGILT  247 (272)
T ss_dssp             ------C---------------T---------------HHHHCCCCCHHHHHHHHHHHHHT
T ss_pred             ------c---------------c---------------cccccCCCCHHHHHHHHHHHHHc
Confidence                  0               0               00012367899999999999988

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=96.91  E-value=0.0085  Score=45.27  Aligned_cols=101  Identities=13%  Similarity=0.051  Sum_probs=64.8

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGEDPRGIP   86 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~~~~~~~   86 (208)
                      .++|++||+..+..           ......|+.+|.+.+.+.+.+..+.+++.+..++||.+-.+....          
T Consensus       131 ~~ii~~sS~~~~~~-----------~~~~~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~----------  189 (235)
T 3l77_A          131 GLALVTTSDVSARL-----------IPYGGGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGS----------  189 (235)
T ss_dssp             CEEEEECCGGGSSC-----------CTTCHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTC----------
T ss_pred             CcEEEEecchhccc-----------CCCcchHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCccccccccc----------
Confidence            36677766544321           112357999999999999988544448999999999988752110          


Q ss_pred             CChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           87 NNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                                   . .            .......++..+|+|++++.++..+.. ...+++.....++
T Consensus       190 -------------~-~------------~~~~~~~~~~p~dva~~v~~l~~~~~~-~~~~~~~~~~~~~  231 (235)
T 3l77_A          190 -------------K-P------------GKPKEKGYLKPDEIAEAVRCLLKLPKD-VRVEELMLRSVYQ  231 (235)
T ss_dssp             -------------C-S------------CCCGGGTCBCHHHHHHHHHHHHTSCTT-CCCCEEEECCTTS
T ss_pred             -------------c-C------------CcccccCCCCHHHHHHHHHHHHcCCCC-CccceEEEeeccc
Confidence                         0 0            001112467899999999999998533 2344555444443

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=96.81  E-value=0.0052  Score=48.30  Aligned_cols=110  Identities=11%  Similarity=-0.063  Sum_probs=72.2

Q ss_pred             CCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCC
Q 028478            6 CKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPR   83 (208)
Q Consensus         6 vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~   83 (208)
                      ..+||++||...+..           ......|+.+|.+.+.+.+.++.+.  .++.+..++||.+..+. .        
T Consensus       176 ~g~Iv~isS~~~~~~-----------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~--------  235 (291)
T 1e7w_A          176 NYSIINMVDAMTNQP-----------LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D--------  235 (291)
T ss_dssp             CEEEEEECCTTTTSC-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G--------
T ss_pred             CcEEEEEechhhcCC-----------CCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c--------
Confidence            468999999776532           1235689999999999998876653  17999999999987652 0        


Q ss_pred             CCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           84 GIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                       . .  -........ .. ++           +.   -+...+|+|++++.++... .....|+.+++.+|..
T Consensus       236 -~-~--~~~~~~~~~-~~-p~-----------~~---r~~~pedvA~~v~~l~s~~-~~~itG~~i~vdGG~~  287 (291)
T 1e7w_A          236 -M-P--PAVWEGHRS-KV-PL-----------YQ---RDSSAAEVSDVVIFLCSSK-AKYITGTCVKVDGGYS  287 (291)
T ss_dssp             -S-C--HHHHHHHHT-TC-TT-----------TT---SCBCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTGG
T ss_pred             -C-C--HHHHHHHHh-hC-CC-----------CC---CCCCHHHHHHHHHHHhCCc-ccCccCcEEEECCCcc
Confidence             0 0  112222221 10 11           10   2568899999999999753 2235678888877653

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=96.80  E-value=0.00043  Score=53.64  Aligned_cols=57  Identities=14%  Similarity=0.022  Sum_probs=43.1

Q ss_pred             CCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCC
Q 028478            5 GCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGA   72 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~   72 (208)
                      +..+||++||...+...           .....|+.+|.+.+.+.+.++.+.  .++.+.+++||.+..+
T Consensus       135 ~~g~iv~isS~~~~~~~-----------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~  193 (262)
T 1zem_A          135 NYGRIVNTASMAGVKGP-----------PNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPG  193 (262)
T ss_dssp             TCEEEEEECCHHHHSCC-----------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSS
T ss_pred             CCcEEEEEcchhhccCC-----------CCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcc
Confidence            45689999997766321           124689999999998888876442  1799999999988764

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=96.70  E-value=0.0036  Score=52.59  Aligned_cols=111  Identities=8%  Similarity=-0.120  Sum_probs=68.5

Q ss_pred             CCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCC
Q 028478            5 GCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDP   82 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~   82 (208)
                      +..+||++||+..+-..           .....|+.+|...+.+.+.++.+.  .++.++.+.||.+..+....      
T Consensus       338 ~~g~iV~iSS~a~~~g~-----------~g~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~------  400 (454)
T 3u0b_A          338 EGGRVIGLSSMAGIAGN-----------RGQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEA------  400 (454)
T ss_dssp             TTCEEEEECCHHHHHCC-----------TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC-----------
T ss_pred             CCCEEEEEeChHhCCCC-----------CCCHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhh------
Confidence            55689999997654211           135689999998888777766432  28999999999998763110      


Q ss_pred             CCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           83 RGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                            +...........                .....+...+|+|+++..++... .....|+++++.++.
T Consensus       401 ------~~~~~~~~~~~~----------------~~l~r~g~pedvA~~v~fL~s~~-a~~itG~~i~vdGG~  450 (454)
T 3u0b_A          401 ------IPLATREVGRRL----------------NSLFQGGQPVDVAELIAYFASPA-SNAVTGNTIRVCGQA  450 (454)
T ss_dssp             -----------CHHHHHS----------------BTTSSCBCHHHHHHHHHHHHCGG-GTTCCSCEEEESSSB
T ss_pred             ------cchhhHHHHHhh----------------ccccCCCCHHHHHHHHHHHhCCc-cCCCCCcEEEECCcc
Confidence                  000000111100                00112457899999999998752 334677999887664

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=96.67  E-value=0.0081  Score=48.57  Aligned_cols=103  Identities=10%  Similarity=-0.037  Sum_probs=67.3

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC-CCccEEEEecccccCCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD-SEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      +.+..+||++||...+...         +..+...|+.+|.+.+.+.+.++.++ .++.+..+.|+.+....        
T Consensus       177 ~~~~g~IV~iSS~~~~~~~---------~~~~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T~--------  239 (346)
T 3kvo_A          177 KSKVAHILNISPPLNLNPV---------WFKQHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTA--------  239 (346)
T ss_dssp             TCSSCEEEEECCCCCCCGG---------GTSSSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCCH--------
T ss_pred             HCCCCEEEEECCHHHcCCC---------CCCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccccH--------
Confidence            4455699999997665321         12235689999999999999887764 37899999998644420        


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEec
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLG  152 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~  152 (208)
                                +.. ...+.                .....+...+|+|++++.++..  .....|+.+ +.
T Consensus       240 ----------~~~-~~~~~----------------~~~~r~~~pedvA~~v~~L~s~--~~~itG~~i-vd  280 (346)
T 3kvo_A          240 ----------AMD-MLGGP----------------GIESQCRKVDIIADAAYSIFQK--PKSFTGNFV-ID  280 (346)
T ss_dssp             ----------HHH-HHCC------------------CGGGCBCTHHHHHHHHHHHTS--CTTCCSCEE-EH
T ss_pred             ----------HHH-hhccc----------------cccccCCCHHHHHHHHHHHHhc--CCCCCceEE-EC
Confidence                      222 22221                0112356889999999999987  223455655 54

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=96.61  E-value=0.0068  Score=51.36  Aligned_cols=110  Identities=10%  Similarity=0.056  Sum_probs=68.8

Q ss_pred             cCCCCEEEEeccccc-cCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATV-YGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         3 ~~~vk~~i~~SS~~v-yg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      +.+.++||++||+.. +|..            ....|+.+|...+.+..++...  +++++++++|.+.+..        
T Consensus       350 ~~~~~~~V~~SS~a~~~g~~------------g~~~Yaaaka~l~~la~~~~~~--gi~v~~i~pG~~~~~g--------  407 (486)
T 2fr1_A          350 ELDLTAFVLFSSFASAFGAP------------GLGGYAPGNAYLDGLAQQRRSD--GLPATAVAWGTWAGSG--------  407 (486)
T ss_dssp             TSCCSEEEEEEEHHHHTCCT------------TCTTTHHHHHHHHHHHHHHHHT--TCCCEEEEECCBC-----------
T ss_pred             cCCCCEEEEEcChHhcCCCC------------CCHHHHHHHHHHHHHHHHHHhc--CCeEEEEECCeeCCCc--------
Confidence            456789999999654 4431            2467999999999998877554  8999999999888741        


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHHH
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLE  161 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e  161 (208)
                                +.......      .+        ......+++.+|+++++..++...    .. .+. +.   .+.|..
T Consensus       408 ----------m~~~~~~~------~~--------~~~g~~~i~~e~~a~~l~~~l~~~----~~-~~~-v~---~~d~~~  454 (486)
T 2fr1_A          408 ----------MAEGPVAD------RF--------RRHGVIEMPPETACRALQNALDRA----EV-CPI-VI---DVRWDR  454 (486)
T ss_dssp             -------------------------C--------TTTTEECBCHHHHHHHHHHHHHTT----CS-SCE-EC---EECHHH
T ss_pred             ----------ccchhHHH------HH--------HhcCCCCCCHHHHHHHHHHHHhCC----CC-eEE-EE---eCCHHH
Confidence                      00000000      00        011235789999999999999872    11 222 22   256776


Q ss_pred             HHHHHH
Q 028478          162 MVAAFE  167 (208)
Q Consensus       162 ~~~~i~  167 (208)
                      +...+.
T Consensus       455 ~~~~~~  460 (486)
T 2fr1_A          455 FLLAYT  460 (486)
T ss_dssp             HHHHHT
T ss_pred             Hhhhhc
Confidence            665443

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=96.53  E-value=0.0048  Score=46.91  Aligned_cols=83  Identities=12%  Similarity=-0.038  Sum_probs=58.2

Q ss_pred             EEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCCC
Q 028478            8 NLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRGI   85 (208)
Q Consensus         8 ~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~~   85 (208)
                      ++|++||...+..           ......|+.+|.+.+.+.+.++.++  .++.+..++||.+-.+..           
T Consensus       129 ~iv~isS~~~~~~-----------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~-----------  186 (235)
T 3l6e_A          129 VLANVLSSAAQVG-----------KANESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFW-----------  186 (235)
T ss_dssp             EEEEECCEECCSS-----------CSSHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC------------
T ss_pred             EEEEEeCHHhcCC-----------CCCCcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcch-----------
Confidence            8999999765532           1124689999999999999887754  279999999998877520           


Q ss_pred             CCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhh
Q 028478           86 PNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHK  138 (208)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  138 (208)
                              ..... .    .             ...++..+|+|++++.++..
T Consensus       187 --------~~~~~-~----~-------------~~~~~~pedvA~~v~~l~~~  213 (235)
T 3l6e_A          187 --------DNTDH-V----D-------------PSGFMTPEDAAAYMLDALEA  213 (235)
T ss_dssp             ------------------------------------CBCHHHHHHHHHHHTCC
T ss_pred             --------hccCC-C----C-------------CcCCCCHHHHHHHHHHHHhC
Confidence                    00000 0    0             11367899999999999986

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=96.38  E-value=0.0018  Score=51.84  Aligned_cols=99  Identities=12%  Similarity=0.139  Sum_probs=65.5

Q ss_pred             CCCCEEEEecccc-ccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSAT-VYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         4 ~~vk~~i~~SS~~-vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      .+..+||++||.. .++..            +...|+.+|.+.+.+.+.++.+.  .++.+.+++||.+ .+..      
T Consensus       141 ~~~grIV~vsS~~~~~~~~------------~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~------  201 (319)
T 1gz6_A          141 QNYGRIIMTASASGIYGNF------------GQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMT------  201 (319)
T ss_dssp             HTCEEEEEECCHHHHHCCT------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTT------
T ss_pred             cCCCEEEEECChhhccCCC------------CCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccc------
Confidence            4556999999964 45421            35689999999999998887653  2799999999876 3210      


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCC
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTG  154 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~  154 (208)
                        .    ...                         ......++..+|+|++++.++..+  ....|+.|++.++
T Consensus       202 --~----~~~-------------------------~~~~~~~~~p~dvA~~~~~l~s~~--~~~tG~~~~v~GG  242 (319)
T 1gz6_A          202 --E----TVM-------------------------PEDLVEALKPEYVAPLVLWLCHES--CEENGGLFEVGAG  242 (319)
T ss_dssp             --G----GGS-------------------------CHHHHHHSCGGGTHHHHHHHTSTT--CCCCSCEEEEETT
T ss_pred             --c----ccC-------------------------ChhhhccCCHHHHHHHHHHHhCch--hhcCCCEEEECCC
Confidence              0    000                         001123457789999999988762  1245677877544

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=96.35  E-value=0.0057  Score=47.12  Aligned_cols=59  Identities=17%  Similarity=0.044  Sum_probs=45.7

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAH   73 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~   73 (208)
                      +.+..++|++||...+..            .+...|+.+|.+.+.+.+.++.+.  .++.+.+++||.+..+.
T Consensus       138 ~~~~g~iv~isS~~~~~~------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  198 (260)
T 2qq5_A          138 PAGQGLIVVISSPGSLQY------------MFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTEL  198 (260)
T ss_dssp             GGTCCEEEEECCGGGTSC------------CSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTT
T ss_pred             hcCCcEEEEEcChhhcCC------------CCCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHH
Confidence            345679999999876631            124689999999999998887542  18999999999998863

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=96.27  E-value=0.0071  Score=47.47  Aligned_cols=39  Identities=8%  Similarity=-0.044  Sum_probs=34.0

Q ss_pred             CCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCC
Q 028478           34 AMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGA   72 (208)
Q Consensus        34 p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~   72 (208)
                      +...|+.||.+.+.+.+.++.+++++.+..+.||.|..+
T Consensus       232 ~~~~Y~~SK~a~~~~~~~la~e~~~i~v~~v~PG~v~T~  270 (311)
T 3o26_A          232 FGAAYTTSKACLNAYTRVLANKIPKFQVNCVCPGLVKTE  270 (311)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHCTTSEEEEECCCSBCSG
T ss_pred             cchhhHHHHHHHHHHHHHHHhhcCCceEEEecCCceecC
Confidence            346799999999999999988875799999999988875

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=96.19  E-value=0.0049  Score=49.38  Aligned_cols=58  Identities=14%  Similarity=0.086  Sum_probs=44.9

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhc---CCCccEEEEecccccCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRS---DSEWKIILLRYFNPVGAH   73 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~iiR~~~i~G~~   73 (208)
                      .+..+||++||...+...           .....|+.+|.+.+.+.+.++.+   + ++.+++++||.|..+.
T Consensus       132 ~~~g~IV~isS~~~~~~~-----------~~~~~Y~aSK~a~~~~~~~la~el~~~-gI~v~~v~PG~v~T~~  192 (327)
T 1jtv_A          132 RGSGRVLVTGSVGGLMGL-----------PFNDVYCASKFALEGLCESLAVLLLPF-GVHLSLIECGPVHTAF  192 (327)
T ss_dssp             HTCEEEEEEEEGGGTSCC-----------TTCHHHHHHHHHHHHHHHHHHHHHGGG-TEEEEEEEECCBCC--
T ss_pred             cCCCEEEEECCcccccCC-----------CCChHHHHHHHHHHHHHHHHHHHhhhc-CcEEEEEEeCcccChH
Confidence            456799999998765321           12458999999999999988764   4 8999999999998863

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=96.13  E-value=0.016  Score=46.07  Aligned_cols=117  Identities=9%  Similarity=0.051  Sum_probs=55.2

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCC-ChHHHhHHHHHHHHHHHhhc----CCCccEEEEecccccCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAM-NPYGRTKLFIEEICRDVHRS----DSEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~-~~Y~~sK~~~E~~~~~~~~~----~~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      .+||++||...+...           ... ..|+.+|.+.+.+.+.++.+    + ++.+..++||.|..+..... ...
T Consensus       185 g~Iv~isS~~~~~~~-----------~~~~~~Y~asKaal~~l~~~la~el~~~~-gIrvn~v~PG~v~T~~~~~~-~~~  251 (319)
T 2ptg_A          185 GSALALSYIASEKVI-----------PGYGGGMSSAKAALESDCRTLAFEAGRAR-AVRVNCISAGPLKSRAASAI-GKA  251 (319)
T ss_dssp             EEEEEEEECC-----------------------------THHHHHHHHHHHHHHH-CCEEEEEEECCCC-----------
T ss_pred             ceEEEEecccccccc-----------CccchhhHHHHHHHHHHHHHHHHHhcccc-CeeEEEEeeCCccChhhhhc-ccc
Confidence            489999997654211           112 47999999999998887654    4 89999999999987531100 000


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                      ..   ..+...+......   ..+             ..-+...+|+|++++.++... .....|+.+.+.+|..
T Consensus       252 ~~---~~~~~~~~~~~~~---~~p-------------~~r~~~peevA~~v~~L~s~~-~~~itG~~i~vdGG~~  306 (319)
T 2ptg_A          252 GD---KTFIDLAIDYSEA---NAP-------------LQKELESDDVGRAALFLLSPL-ARAVTGATLYVDNGLH  306 (319)
T ss_dssp             ----------------------------------------CCCHHHHHHHHHHHTSGG-GTTCCSCEEEESTTCT
T ss_pred             cc---hhhHHHHHHHHhc---cCC-------------CCCCCCHHHHHHHHHHHhCcc-cCCccCCEEEECCCce
Confidence            00   0000000000000   001             123568899999999998752 2235678888877753

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=96.11  E-value=0.0065  Score=46.46  Aligned_cols=55  Identities=11%  Similarity=0.038  Sum_probs=43.1

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGA   72 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~   72 (208)
                      .++|++||...+..           ..+...|+.+|.+.+.+.+.++.+.  .++.+++++||.+.++
T Consensus       135 g~iv~isS~~~~~~-----------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~  191 (247)
T 2jah_A          135 GTVVQMSSIAGRVN-----------VRNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTE  191 (247)
T ss_dssp             CEEEEECCGGGTCC-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSS
T ss_pred             CEEEEEccHHhcCC-----------CCCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCc
Confidence            68999999776532           1235689999999998888776542  2799999999999886

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=96.11  E-value=0.04  Score=42.51  Aligned_cols=117  Identities=15%  Similarity=0.027  Sum_probs=68.2

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      .+||++||...++            ......|+.+|.+.+.+.+.++.++  .++.+.+++||.+-.+......+   ..
T Consensus       142 g~iv~iss~~~~~------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~---~~  206 (269)
T 2h7i_A          142 GSIVGMDFDPSRA------------MPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVG---GA  206 (269)
T ss_dssp             EEEEEEECCCSSC------------CTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHT---TT
T ss_pred             CeEEEEcCccccc------------cCchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhcccc---cc
Confidence            3899999865432            1234689999999999998876653  27999999999887641000000   00


Q ss_pred             CCCChH---H-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           85 IPNNLM---P-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        85 ~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                      ......   . .........  |+           +   |-+...+|+|++++.++... .....|+.+.+.+|.
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~--p~-----------~---rr~~~p~dvA~~v~~L~s~~-~~~itG~~i~vdGG~  264 (269)
T 2h7i_A          207 LGEEAGAQIQLLEEGWDQRA--PI-----------G---WNMKDATPVAKTVCALLSDW-LPATTGDIIYADGGA  264 (269)
T ss_dssp             TCHHHHHHHHHHHHHHHHHC--TT-----------C---CCTTCCHHHHHHHHHHHSSS-CTTCCSEEEEESTTG
T ss_pred             chhhHHHHHHHHHHhhhccC--Cc-----------c---cCCCCHHHHHHHHHHHhCch-hccCcceEEEecCCe
Confidence            000000   0 000111100  10           1   12567899999999998752 234567888887664

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=96.10  E-value=0.062  Score=41.30  Aligned_cols=102  Identities=11%  Similarity=-0.000  Sum_probs=69.2

Q ss_pred             EEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC-CCccEEEEecccccCCCCCCCCCCCCCCCC
Q 028478            8 NLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD-SEWKIILLRYFNPVGAHPSGKIGEDPRGIP   86 (208)
Q Consensus         8 ~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~iiR~~~i~G~~~~~~~~~~~~~~~   86 (208)
                      ++|++||...+-..           .....|+.||.....+.+.++.++ |++.+..+-||.|-.+..+           
T Consensus       127 ~IInisS~~~~~~~-----------~~~~~Y~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~-----------  184 (247)
T 3ged_A          127 RIINIASTRAFQSE-----------PDSEAYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQ-----------  184 (247)
T ss_dssp             EEEEECCGGGTSCC-----------TTCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC-------------
T ss_pred             cEEEEeecccccCC-----------CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcH-----------
Confidence            89999997665321           124579999999999999988776 6899999999988654210           


Q ss_pred             CChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           87 NNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                       .   +.......-  |+           +    -+...+|+|.+++.++..   +-..|+++.+.+|.
T Consensus       185 -~---~~~~~~~~~--Pl-----------~----R~g~pediA~~v~fL~s~---~~iTG~~i~VDGG~  229 (247)
T 3ged_A          185 -E---FTQEDCAAI--PA-----------G----KVGTPKDISNMVLFLCQQ---DFITGETIIVDGGM  229 (247)
T ss_dssp             -----CCHHHHHTS--TT-----------S----SCBCHHHHHHHHHHHHHC---SSCCSCEEEESTTG
T ss_pred             -H---HHHHHHhcC--CC-----------C----CCcCHHHHHHHHHHHHhC---CCCCCCeEEECcCH
Confidence             0   111222211  11           1    145789999999999864   24677899887764

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=96.00  E-value=0.0088  Score=46.49  Aligned_cols=101  Identities=10%  Similarity=-0.024  Sum_probs=63.2

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      +.+..++|++||...+...         ...+...|+.+|.+.+.+.+.++.++  .++.+..+.||.+....       
T Consensus       138 ~~~~g~iv~isS~~~~~~~---------~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~-------  201 (274)
T 3e03_A          138 QAPNPHILTLAPPPSLNPA---------WWGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATD-------  201 (274)
T ss_dssp             TSSSCEEEECCCCCCCCHH---------HHHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC--------
T ss_pred             hcCCceEEEECChHhcCCC---------CCCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccc-------
Confidence            3455689999997655310         01124579999999999998887653  17999999998544321       


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceE
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVY  149 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~  149 (208)
                                 +. ....+                 .....+...+|+|++++.++... .....|+.+
T Consensus       202 -----------~~-~~~~~-----------------~~~~~~~~pedvA~~v~~l~s~~-~~~itG~~i  240 (274)
T 3e03_A          202 -----------AI-NMLPG-----------------VDAAACRRPEIMADAAHAVLTRE-AAGFHGQFL  240 (274)
T ss_dssp             ------------------C-----------------CCGGGSBCTHHHHHHHHHHHTSC-CTTCCSCEE
T ss_pred             -----------hh-hhccc-----------------ccccccCCHHHHHHHHHHHhCcc-ccccCCeEE
Confidence                       11 11111                 11122678999999999999763 223445655

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=95.91  E-value=0.083  Score=41.76  Aligned_cols=115  Identities=13%  Similarity=0.058  Sum_probs=69.1

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCC-ChHHHhHHHHHHHHHHHhhc----CCCccEEEEecccccCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAM-NPYGRTKLFIEEICRDVHRS----DSEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~-~~Y~~sK~~~E~~~~~~~~~----~~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      .+||++||...+...           ... ..|+.+|.+.+.+.+.++.+    + ++.+..++||.|-.+..... .. 
T Consensus       172 g~Iv~isS~~~~~~~-----------~~~~~~Y~asKaal~~l~~~la~el~~~~-gIrvn~v~PG~v~T~~~~~~-~~-  237 (315)
T 2o2s_A          172 GSAVTLSYLAAERVV-----------PGYGGGMSSAKAALESDTRTLAWEAGQKY-GVRVNAISAGPLKSRAASAI-GK-  237 (315)
T ss_dssp             EEEEEEEEGGGTSCC-----------TTCCTTHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEECCCCCHHHHHT-TC-
T ss_pred             CEEEEEecccccccC-----------CCccHHHHHHHHHHHHHHHHHHHHhCccc-CeEEEEEecccccchhhhhc-cc-
Confidence            489999997655321           112 47999999999999887654    4 89999999999876421000 00 


Q ss_pred             CCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           82 PRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        82 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                       .. ...+.. .........  ++               .-+...+|+|++++.++... .....|+.+.+.+|.
T Consensus       238 -~~-~~~~~~~~~~~~~~~~--p~---------------~r~~~pedvA~~v~~L~s~~-~~~itG~~i~vdGG~  292 (315)
T 2o2s_A          238 -SG-EKSFIDYAIDYSYNNA--PL---------------RRDLHSDDVGGAALFLLSPL-ARAVSGVTLYVDNGL  292 (315)
T ss_dssp             -SS-SSCHHHHHHHHHHHHS--SS---------------CCCCCHHHHHHHHHHHTSGG-GTTCCSCEEEESTTG
T ss_pred             -cc-cchhHHHHHHHHhccC--CC---------------CCCCCHHHHHHHHHHHhCch-hccCcCCEEEECCCe
Confidence             00 001111 111111111  11               12468899999999998752 223567888887664

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=95.84  E-value=0.032  Score=43.56  Aligned_cols=113  Identities=12%  Similarity=0.047  Sum_probs=68.5

Q ss_pred             EEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCCC
Q 028478            8 NLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRGI   85 (208)
Q Consensus         8 ~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~~   85 (208)
                      ++|++||....-.           ......|+.+|.....+.+.++.++  -++.+..+-||.|-.+......+.     
T Consensus       154 ~IInisS~~~~~~-----------~~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~-----  217 (273)
T 4fgs_A          154 SVVLTGSTAGSTG-----------TPAFSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGK-----  217 (273)
T ss_dssp             EEEEECCGGGGSC-----------CTTCHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC--------------
T ss_pred             eEEEEeehhhccC-----------CCCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhcc-----
Confidence            6899988765421           1124589999999999999887665  278999999999877632111000     


Q ss_pred             CCChH-H-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           86 PNNLM-P-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        86 ~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                       .... . +.......-  |+           +    =+...+|+|.+++.++... ..-..|+.+.+-+|.
T Consensus       218 -~~~~~~~~~~~~~~~~--Pl-----------g----R~g~peeiA~~v~FLaSd~-a~~iTG~~i~VDGG~  270 (273)
T 4fgs_A          218 -DPVQQQGLLNALAAQV--PM-----------G----RVGRAEEVAAAALFLASDD-SSFVTGAELFVDGGS  270 (273)
T ss_dssp             -CHHHHHHHHHHHHHHS--TT-----------S----SCBCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTT
T ss_pred             -CchhhHHHHHHHHhcC--CC-----------C----CCcCHHHHHHHHHHHhCch-hcCccCCeEeECcCh
Confidence             0001 1 222222211  11           1    1457899999999998652 234667888887664

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=95.67  E-value=0.067  Score=41.10  Aligned_cols=110  Identities=10%  Similarity=0.058  Sum_probs=70.0

Q ss_pred             EEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC-C-CccEEEEecccccCCCCCCCCCCCCCCC
Q 028478            8 NLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD-S-EWKIILLRYFNPVGAHPSGKIGEDPRGI   85 (208)
Q Consensus         8 ~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~-~~~~~iiR~~~i~G~~~~~~~~~~~~~~   85 (208)
                      +||++||....-.           ......|+.+|...+.+.+.++.+. | ++.+..+-||.+-.+.....        
T Consensus       141 ~IVnisS~~~~~~-----------~~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~--------  201 (256)
T 4fs3_A          141 SIVATTYLGGEFA-----------VQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGV--------  201 (256)
T ss_dssp             EEEEEECGGGTSC-----------CTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTC--------
T ss_pred             EEEEEeccccccC-----------cccchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhc--------
Confidence            7999998654321           1234689999999999888876653 1 79999999998877532110        


Q ss_pred             CCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           86 PNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                       ...-.........-  |+.               -+...+|+|.+++.++... ..-..|+++.+-+|.
T Consensus       202 -~~~~~~~~~~~~~~--Pl~---------------R~g~peevA~~v~fL~Sd~-a~~iTG~~i~VDGG~  252 (256)
T 4fs3_A          202 -GGFNTILKEIKERA--PLK---------------RNVDQVEVGKTAAYLLSDL-SSGVTGENIHVDSGF  252 (256)
T ss_dssp             -TTHHHHHHHHHHHS--TTS---------------SCCCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTG
T ss_pred             -cCCHHHHHHHHhcC--CCC---------------CCcCHHHHHHHHHHHhCch-hcCccCCEEEECcCH
Confidence             11111333333221  221               1456899999999988652 233667888887664

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=95.50  E-value=0.075  Score=40.71  Aligned_cols=110  Identities=9%  Similarity=-0.042  Sum_probs=69.8

Q ss_pred             EEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCCC
Q 028478            8 NLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRGI   85 (208)
Q Consensus         8 ~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~~   85 (208)
                      ++|++||....-.           ......|+.||.....+.+.++.++  -++.+..+-||.|-.+......       
T Consensus       128 ~IVnisS~~~~~~-----------~~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~-------  189 (242)
T 4b79_A          128 SILNIASMYSTFG-----------SADRPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLK-------  189 (242)
T ss_dssp             EEEEECCGGGTSC-----------CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----C-------
T ss_pred             eEEEEeeccccCC-----------CCCCHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhccc-------
Confidence            7999999765421           1124589999999999988876653  1799999999999876321100       


Q ss_pred             CCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           86 PNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                       .. ..........-  |+.               -+...+|+|.+++.++... ..-..|+.+.+-+|.
T Consensus       190 -~~-~~~~~~~~~~~--Plg---------------R~g~peeiA~~v~fLaSd~-a~~iTG~~l~VDGG~  239 (242)
T 4b79_A          190 -AD-VEATRRIMQRT--PLA---------------RWGEAPEVASAAAFLCGPG-ASFVTGAVLAVDGGY  239 (242)
T ss_dssp             -CC-HHHHHHHHHTC--TTC---------------SCBCHHHHHHHHHHHTSGG-GTTCCSCEEEESTTG
T ss_pred             -CC-HHHHHHHHhcC--CCC---------------CCcCHHHHHHHHHHHhCch-hcCccCceEEECccH
Confidence             00 11233333322  221               1457899999999988652 234667888887664

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=95.08  E-value=0.11  Score=44.14  Aligned_cols=109  Identities=12%  Similarity=0.058  Sum_probs=69.8

Q ss_pred             CCCEEEEecccc-ccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCCCCC
Q 028478            5 GCKNLVFSSSAT-VYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGEDPR   83 (208)
Q Consensus         5 ~vk~~i~~SS~~-vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~~~~   83 (208)
                      +.++||++||+. ++|..            ....|+.+|...|.+.+.+...  +++++++++|.+-+..      .   
T Consensus       382 ~~~~~V~~SS~a~~~g~~------------g~~~YaaaKa~ld~la~~~~~~--gi~v~sv~pG~~~~tg------m---  438 (511)
T 2z5l_A          382 GLDAFVLFSSVTGTWGNA------------GQGAYAAANAALDALAERRRAA--GLPATSVAWGLWGGGG------M---  438 (511)
T ss_dssp             TCCCEEEEEEGGGTTCCT------------TBHHHHHHHHHHHHHHHHHHTT--TCCCEEEEECCBCSTT------C---
T ss_pred             CCCEEEEEeCHHhcCCCC------------CCHHHHHHHHHHHHHHHHHHHc--CCcEEEEECCcccCCc------c---
Confidence            677999999974 45531            2468999999999999887543  8999999998773320      0   


Q ss_pred             CCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHHHHH
Q 028478           84 GIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMV  163 (208)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~  163 (208)
                        .....  .......                +   ..+++.+|+++++..++...    . ..++ +.   .+.|..+.
T Consensus       439 --~~~~~--~~~~~~~----------------g---~~~l~~e~~a~~l~~al~~~----~-~~v~-v~---~~d~~~~~  486 (511)
T 2z5l_A          439 --AAGAG--EESLSRR----------------G---LRAMDPDAAVDALLGAMGRN----D-VCVT-VV---DVDWERFA  486 (511)
T ss_dssp             --CCCHH--HHHHHHH----------------T---BCCBCHHHHHHHHHHHHHHT----C-SEEE-EC---CBCHHHHH
T ss_pred             --ccccc--HHHHHhc----------------C---CCCCCHHHHHHHHHHHHhCC----C-CEEE-EE---eCCHHHHH
Confidence              01111  1111111                1   23588999999999999882    1 1222 33   25677777


Q ss_pred             HHHHH
Q 028478          164 AAFEK  168 (208)
Q Consensus       164 ~~i~~  168 (208)
                      ..+..
T Consensus       487 ~~~~~  491 (511)
T 2z5l_A          487 PATNA  491 (511)
T ss_dssp             HHHHH
T ss_pred             hhhcc
Confidence            66554

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=95.07  E-value=0.0024  Score=51.26  Aligned_cols=41  Identities=17%  Similarity=0.101  Sum_probs=37.1

Q ss_pred             CCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCC
Q 028478           32 LEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAH   73 (208)
Q Consensus        32 ~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~   73 (208)
                      ..|.+.|+.+|..+|++...+++.+ +++..++|+++|||++
T Consensus       147 ~~p~~~yg~tkl~~er~~~~~a~~~-g~~~~~vr~~~V~G~h  187 (327)
T 1y7t_A          147 LNPRNFTAMTRLDHNRAKAQLAKKT-GTGVDRIRRMTVWGNH  187 (327)
T ss_dssp             SCGGGEEECCHHHHHHHHHHHHHHH-TCCGGGEECCEEEBCS
T ss_pred             CChhheeccchHHHHHHHHHHHHHh-CcChhheeeeEEEcCC
Confidence            4567789999999999999998888 9999999999999986

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=94.99  E-value=0.068  Score=41.22  Aligned_cols=115  Identities=12%  Similarity=-0.024  Sum_probs=70.2

Q ss_pred             CCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCC
Q 028478            5 GCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDP   82 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~   82 (208)
                      +--++|++||....-.           ......|+.+|.....+.+.++.++  -++.+..+-||.|-.+......    
T Consensus       135 ~~G~IVnisS~~g~~~-----------~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~----  199 (254)
T 4fn4_A          135 GKGVIVNTASIAGIRG-----------GFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSS----  199 (254)
T ss_dssp             TCEEEEEECCGGGTCS-----------SSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCS----
T ss_pred             CCcEEEEEechhhcCC-----------CCCChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCccccccc----
Confidence            3348999999765421           1124579999999998888876653  1799999999999776321110    


Q ss_pred             CCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           83 RGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                       . ....  ......... +++           +    -+...+|+|.+++.++... +.-..|+.+.+.+|.
T Consensus       200 -~-~~~~--~~~~~~~~~-~~~-----------~----R~g~pediA~~v~fLaSd~-a~~iTG~~i~VDGG~  251 (254)
T 4fn4_A          200 -K-PSEL--GMRTLTKLM-SLS-----------S----RLAEPEDIANVIVFLASDE-ASFVNGDAVVVDGGL  251 (254)
T ss_dssp             -S-CCHH--HHHHHHHHH-TTC-----------C----CCBCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTG
T ss_pred             -C-CcHH--HHHHHHhcC-CCC-----------C----CCcCHHHHHHHHHHHhCch-hcCCcCCEEEeCCCc
Confidence             0 0101  111111111 011           1    1456799999999988652 234677888887664

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=94.95  E-value=0.073  Score=42.44  Aligned_cols=55  Identities=7%  Similarity=-0.101  Sum_probs=40.8

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCC-hHHHhHHHHHHHHHHHhhcC-C--CccEEEEecccccCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMN-PYGRTKLFIEEICRDVHRSD-S--EWKIILLRYFNPVGA   72 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~-~Y~~sK~~~E~~~~~~~~~~-~--~~~~~iiR~~~i~G~   72 (208)
                      .+||++||...+...           .... .|+.+|.+.+.+.+.++.+. +  ++.+..+.||.|-.+
T Consensus       165 g~Iv~isS~~~~~~~-----------~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~  223 (329)
T 3lt0_A          165 SSIISLTYHASQKVV-----------PGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSR  223 (329)
T ss_dssp             EEEEEEECGGGTSCC-----------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCH
T ss_pred             CeEEEEeCccccCCC-----------CcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeech
Confidence            379999997654211           1233 79999999999888776543 2  899999999998764

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=94.71  E-value=0.19  Score=38.78  Aligned_cols=115  Identities=16%  Similarity=0.055  Sum_probs=70.6

Q ss_pred             EEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCCC
Q 028478            8 NLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRGI   85 (208)
Q Consensus         8 ~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~~   85 (208)
                      ++|++||....-..           .....|+.+|...+.+.+.++.++  -++.+..+-||.|-.+...........  
T Consensus       134 ~IVnisS~~~~~~~-----------~~~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~--  200 (258)
T 4gkb_A          134 AIVNISSKTAVTGQ-----------GNTSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFED--  200 (258)
T ss_dssp             EEEEECCTHHHHCC-----------SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------
T ss_pred             eEEEEeehhhccCC-----------CCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccC--
Confidence            79999997654211           124579999999999998877543  179999999999987642211100000  


Q ss_pred             CCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           86 PNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                      ..   ..........  |+           +   +-+...+|+|.+++.++... ..-..|+.+.+.+|.
T Consensus       201 ~~---~~~~~~~~~~--pl-----------g---~R~g~peeiA~~v~fLaS~~-a~~iTG~~i~VDGG~  250 (258)
T 4gkb_A          201 PE---AKLAEIAAKV--PL-----------G---RRFTTPDEIADTAVFLLSPR-ASHTTGEWLFVDGGY  250 (258)
T ss_dssp             -----CHHHHHHTTC--TT-----------T---TSCBCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTT
T ss_pred             hH---HHHHHHHhcC--CC-----------C---CCCcCHHHHHHHHHHHhCch-hcCccCCeEEECCCc
Confidence            00   0222222211  11           1   12567899999999988652 234677999887775

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=94.15  E-value=0.045  Score=47.66  Aligned_cols=99  Identities=9%  Similarity=-0.062  Sum_probs=62.0

Q ss_pred             cCCCCEEEEecccccc-CCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVY-GWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIG   79 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vy-g~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~   79 (208)
                      +.+..+||++||...+ +.            .....|+.+|.+.+.+.+.++.+.  .++.+..+.|+.+-..       
T Consensus       150 ~~~~g~IV~isS~a~~~~~------------~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~t~~-------  210 (613)
T 3oml_A          150 KQNYGRIIMTSSNSGIYGN------------FGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAASRM-------  210 (613)
T ss_dssp             TTTCEEEEEECCHHHHHCC------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC------------
T ss_pred             HcCCCEEEEECCHHHcCCC------------CCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCCChh-------
Confidence            3455689999996544 32            134679999999999998877653  1789999998753110       


Q ss_pred             CCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecC
Q 028478           80 EDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGT  153 (208)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~  153 (208)
                                       ..+.              ........+..+|+|.+++.++...  ....|+.+++.+
T Consensus       211 -----------------~~~~--------------~~~~~~~~~~pedvA~~v~~L~s~~--~~~tG~~i~vdG  251 (613)
T 3oml_A          211 -----------------TEGI--------------LPDILFNELKPKLIAPVVAYLCHES--CEDNGSYIESAA  251 (613)
T ss_dssp             ------------------CCC--------------CCHHHHTTCCGGGTHHHHHHTTSTT--CCCCSCEEEEET
T ss_pred             -----------------hhhc--------------cchhhhhcCCHHHHHHHHHHhcCCC--cCCCceEEEECC
Confidence                             0000              0111223357789999999888763  235567777643

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=93.54  E-value=0.55  Score=36.17  Aligned_cols=123  Identities=11%  Similarity=0.024  Sum_probs=68.7

Q ss_pred             CCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCC
Q 028478            5 GCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDP   82 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~   82 (208)
                      +--++|++||+...-...          .....|+.+|.+.+.+.+.++.++  -++.+..+-||.|-.+.         
T Consensus       130 ~~G~Iv~isS~~~~~~~~----------~~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~---------  190 (261)
T 4h15_A          130 GSGVVVHVTSIQRVLPLP----------ESTTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEA---------  190 (261)
T ss_dssp             TCEEEEEECCGGGTSCCT----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHH---------
T ss_pred             CCceEEEEEehhhccCCC----------CccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcc---------
Confidence            334799999875542110          124579999999999888877653  17999999998887641         


Q ss_pred             CCCCCChHHHHHHHHhCCCCeeEEEc---cccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           83 RGIPNNLMPFVTQVAVGRRPELTVFG---TDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                            ...+.....+.......-..   .+.-  ......=+...+|+|.+++.++.. ...-..|+.+.+.+|.
T Consensus       191 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~PlgR~g~peevA~~v~fLaS~-~a~~itG~~i~VDGG~  257 (261)
T 4h15_A          191 ------SVRLAERLAKQAGTDLEGGKKIIMDGL--GGIPLGRPAKPEEVANLIAFLASD-RAASITGAEYTIDGGT  257 (261)
T ss_dssp             ------HHHHHHHHHHHTTCCHHHHHHHHHHHT--TCCTTSSCBCHHHHHHHHHHHHSG-GGTTCCSCEEEESTTC
T ss_pred             ------hhhhhHHHHHhhccchhhHHHHHHHHh--cCCCCCCCcCHHHHHHHHHHHhCc-hhcCccCcEEEECCcC
Confidence                  00011111000000000000   0000  000011256789999999998865 2334677999887765

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=93.48  E-value=0.043  Score=42.39  Aligned_cols=109  Identities=11%  Similarity=-0.011  Sum_probs=68.9

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC-C-CccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD-S-EWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~-~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      -++|++||.......           .....|+.+|.....+.+.++.++ | ++.+..+-||.|..+...         
T Consensus       139 G~IVnisS~~~~~~~-----------~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~---------  198 (255)
T 4g81_D          139 GKIINIGSLTSQAAR-----------PTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNT---------  198 (255)
T ss_dssp             EEEEEECCGGGTSBC-----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGH---------
T ss_pred             CEEEEEeehhhcCCC-----------CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhh---------
Confidence            389999997655321           124579999999999888877653 1 799999999998875210         


Q ss_pred             CCCChH--HHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           85 IPNNLM--PFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        85 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                         .+.  +.......... |+.               -+...+|+|.+++.++.. ...-..|+.+.+-+|.
T Consensus       199 ---~~~~~~~~~~~~~~~~-Pl~---------------R~g~pediA~~v~fL~S~-~a~~iTG~~i~VDGG~  251 (255)
T 4g81_D          199 ---ALIEDKQFDSWVKSST-PSQ---------------RWGRPEELIGTAIFLSSK-ASDYINGQIIYVDGGW  251 (255)
T ss_dssp             ---HHHTCHHHHHHHHHHS-TTC---------------SCBCGGGGHHHHHHHHSG-GGTTCCSCEEEESTTG
T ss_pred             ---cccCCHHHHHHHHhCC-CCC---------------CCcCHHHHHHHHHHHhCc-hhCCCcCCEEEECCCe
Confidence               000  11111111110 111               145678999999988865 2334677888887663

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=93.45  E-value=0.12  Score=39.59  Aligned_cols=108  Identities=10%  Similarity=0.003  Sum_probs=68.5

Q ss_pred             EEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCCC
Q 028478            8 NLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRGI   85 (208)
Q Consensus         8 ~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~~   85 (208)
                      +||++||....-..           .....|+.||.....+.+.++.++  -++.+..+-||.|-.+...          
T Consensus       133 ~IVnisS~~~~~g~-----------~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~----------  191 (247)
T 4hp8_A          133 KVVNIASLLSFQGG-----------IRVPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTE----------  191 (247)
T ss_dssp             EEEEECCGGGTSCC-----------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGH----------
T ss_pred             EEEEEechhhCCCC-----------CCChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchh----------
Confidence            89999997654211           124579999999999988876543  1799999999998765210          


Q ss_pred             CCChH--HHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           86 PNNLM--PFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        86 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                        .+.  +...+...... |+.               =+...+|+|.+++.++.. .+.-..|+.+.+-+|.
T Consensus       192 --~~~~~~~~~~~~~~~~-Plg---------------R~g~peeiA~~v~fLaSd-~a~~iTG~~i~VDGG~  244 (247)
T 4hp8_A          192 --ALRADAARNKAILERI-PAG---------------RWGHSEDIAGAAVFLSSA-AADYVHGAILNVDGGW  244 (247)
T ss_dssp             --HHHTSHHHHHHHHTTC-TTS---------------SCBCTHHHHHHHHHHTSG-GGTTCCSCEEEESTTG
T ss_pred             --hcccCHHHHHHHHhCC-CCC---------------CCcCHHHHHHHHHHHhCc-hhcCCcCCeEEECccc
Confidence              000  01112222221 221               145679999999998865 2334667888887653

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=88.70  E-value=0.48  Score=40.13  Aligned_cols=56  Identities=9%  Similarity=0.090  Sum_probs=43.0

Q ss_pred             cCCCCEEEEeccccc-cCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCC
Q 028478            3 AHGCKNLVFSSSATV-YGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGA   72 (208)
Q Consensus         3 ~~~vk~~i~~SS~~v-yg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~   72 (208)
                      ..+..+||++||+.. +|.            .....|+.+|...+.+.+.+...  +++++.+.||.+.+.
T Consensus       364 ~~~~~~iV~~SS~a~~~g~------------~g~~~YaAaKa~ldala~~~~~~--Gi~v~sV~pG~w~~~  420 (496)
T 3mje_A          364 DLDLDAFVLFSSGAAVWGS------------GGQPGYAAANAYLDALAEHRRSL--GLTASSVAWGTWGEV  420 (496)
T ss_dssp             TSCCSEEEEEEEHHHHTTC------------TTCHHHHHHHHHHHHHHHHHHHT--TCCCEEEEECEESSS
T ss_pred             ccCCCEEEEEeChHhcCCC------------CCcHHHHHHHHHHHHHHHHHHhc--CCeEEEEECCcccCC
Confidence            346678999999654 442            12468999999999999877654  899999999987764

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=88.33  E-value=2.1  Score=37.16  Aligned_cols=115  Identities=13%  Similarity=0.117  Sum_probs=73.1

Q ss_pred             CEEEEecccccc-CCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVY-GWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPR   83 (208)
Q Consensus         7 k~~i~~SS~~vy-g~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~   83 (208)
                      -+||++||..-. +.            .....|+.||.....+.+.++.+.  .++.+..+-|+. -.+           
T Consensus       447 G~IVnisS~ag~~~~------------~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~-----------  502 (604)
T 2et6_A          447 GRIINITSTSGIYGN------------FGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETA-----------  502 (604)
T ss_dssp             EEEEEECCHHHHSCC------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCC-----------
T ss_pred             CEEEEECChhhccCC------------CCChhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCc-----------
Confidence            489999996543 31            124579999999999888876543  179999999972 111           


Q ss_pred             CCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCC---------
Q 028478           84 GIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTG---------  154 (208)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~---------  154 (208)
                              +...... .    .             .......+|+|.++..++... .. ..|+++.+.+|         
T Consensus       503 --------m~~~~~~-~----~-------------~~~~~~pe~vA~~v~~L~s~~-~~-itG~~~~vdGG~~~~~~~~~  554 (604)
T 2et6_A          503 --------MTLSIMR-E----Q-------------DKNLYHADQVAPLLVYLGTDD-VP-VTGETFEIGGGWIGNTRWQR  554 (604)
T ss_dssp             --------C---------------------------CCSSCGGGTHHHHHHTTSTT-CC-CCSCEEEEETTEEEEEEEEE
T ss_pred             --------cccccCc-h----h-------------hccCCCHHHHHHHHHHHhCCc-cC-CCCcEEEECCCeeEeeeeec
Confidence                    0000000 0    0             012346789999998887653 33 56677776554         


Q ss_pred             --------CCcCHHHHHHHHHHHhCCC
Q 028478          155 --------KGTSVLEMVAAFEKASGKV  173 (208)
Q Consensus       155 --------~~~s~~e~~~~i~~~~g~~  173 (208)
                              ..++..++.+.+.+.....
T Consensus       555 ~~~~~~~~~~~~~~~~~~~~~~i~~~~  581 (604)
T 2et6_A          555 AKGAVSHDEHTTVEFIKEHLNEITDFT  581 (604)
T ss_dssp             CCCEECCSSSCCHHHHHHHHHHHTCCS
T ss_pred             cccccCCCCCCCHHHHHHHHHHHhccc
Confidence                    2368888888888876664

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=85.79  E-value=0.7  Score=39.39  Aligned_cols=51  Identities=14%  Similarity=0.074  Sum_probs=38.8

Q ss_pred             CCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccc
Q 028478            6 CKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNP   69 (208)
Q Consensus         6 vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i   69 (208)
                      ..+||++||+..+-..           .....|+.+|...+.+..++.. . +++++.+.||.+
T Consensus       394 ~~~iV~~SS~a~~~g~-----------~g~~~YaaaKa~l~~lA~~~~~-~-gi~v~sI~pG~~  444 (525)
T 3qp9_A          394 PPVLVLFSSVAAIWGG-----------AGQGAYAAGTAFLDALAGQHRA-D-GPTVTSVAWSPW  444 (525)
T ss_dssp             CCEEEEEEEGGGTTCC-----------TTCHHHHHHHHHHHHHHTSCCS-S-CCEEEEEEECCB
T ss_pred             CCEEEEECCHHHcCCC-----------CCCHHHHHHHHHHHHHHHHHHh-C-CCCEEEEECCcc
Confidence            6789999997654211           1246899999999988766544 3 899999999988

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=83.31  E-value=9.2  Score=33.07  Aligned_cols=114  Identities=11%  Similarity=0.087  Sum_probs=71.5

Q ss_pred             CEEEEeccccc-cCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATV-YGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPR   83 (208)
Q Consensus         7 k~~i~~SS~~v-yg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~   83 (208)
                      -+||++||... ++..            ....|+.+|.....+.+.++.+.  .++.+..+-|+ +-.+           
T Consensus       143 G~IVnisS~ag~~~~~------------~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~-----------  198 (604)
T 2et6_A          143 GRIVNTSSPAGLYGNF------------GQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSR-----------  198 (604)
T ss_dssp             EEEEEECCHHHHHCCT------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCH-----------
T ss_pred             CEEEEECCHHHcCCCC------------CchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCc-----------
Confidence            48999998654 3321            23579999999999988876643  17899999985 2110           


Q ss_pred             CCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCC---------
Q 028478           84 GIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTG---------  154 (208)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~---------  154 (208)
                              +..    ...+              .........+|+|.+++.++...  ....|+++.+.+|         
T Consensus       199 --------m~~----~~~~--------------~~~~~~~~pe~vA~~v~~L~s~~--~~itG~~~~vdgG~~~~~~~~~  250 (604)
T 2et6_A          199 --------MTE----SIMP--------------PPMLEKLGPEKVAPLVLYLSSAE--NELTGQFFEVAAGFYAQIRWER  250 (604)
T ss_dssp             --------HHH----TTSC--------------HHHHTTCSHHHHHHHHHHHTSSS--CCCCSCEEEEETTEEEEEEEEE
T ss_pred             --------ccc----ccCC--------------hhhhccCCHHHHHHHHHHHhCCc--ccCCCCEEEECCCeEEEEEEEe
Confidence                    111    1000              00112357899999999988763  2345677766543         


Q ss_pred             ---------CCcCHHHHHHHHHHHhCC
Q 028478          155 ---------KGTSVLEMVAAFEKASGK  172 (208)
Q Consensus       155 ---------~~~s~~e~~~~i~~~~g~  172 (208)
                               ..++..++.+.+.+....
T Consensus       251 ~~~~~~~~~~~~~~~~v~~~~~~~~~~  277 (604)
T 2et6_A          251 SGGVLFKPDQSFTAEVVAKRFSEILDY  277 (604)
T ss_dssp             CCCEECCSSTTCCHHHHHHHHHHHTCC
T ss_pred             ccceecCCCCCCCHHHHHHHHHHhhch
Confidence                     345778888877766543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	208
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	7e-34
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	6e-32
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	2e-31
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	1e-28
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	2e-28
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	1e-27
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	2e-27
d1gy8a_	383	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	6e-22
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	1e-21
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	5e-20
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	6e-19
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	7e-17
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	1e-15
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	8e-13
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	9e-09
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	1e-08
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	6e-06
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	9e-06
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	2e-05
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	1e-04
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	8e-04

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score =  121 bits (303), Expect = 7e-34
 Identities = 101/173 (58%), Positives = 124/173 (71%), Gaps = 2/173 (1%)

Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEF-PLEAMNPYGRTKLFIEEICRDVHRSDSEW 59
           M A   KN +FSSSATVYG    +P  E F      +PYG++KL +E+I  D+ ++  +W
Sbjct: 111 MRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDW 170

Query: 60  KIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGV 119
            I LLRYFNPVGAHPSG +GEDP+GIPNNLMP++ QVAVGRR  L +FG DY T+DGTGV
Sbjct: 171 SIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGV 230

Query: 120 RDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           RDYIHV+DLADGH+ A  +    K G  +YNLG G G SVL++V AF KA GK
Sbjct: 231 RDYIHVMDLADGHVVA-MEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGK 282

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score =  115 bits (289), Expect = 6e-32
 Identities = 44/173 (25%), Positives = 66/173 (38%), Gaps = 24/173 (13%)

Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
               G   +V  S+  VYG       TE  PLE  +PY  +K   + + R  HR+     
Sbjct: 114 AVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRT-YGLD 172

Query: 61  IILLRYFNPVGAHPSGKIGEDPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGV 119
           + + R  N  G          P   P  L+P FVT +  G    L ++G      DG  V
Sbjct: 173 VRITRCCNNYG----------PYQHPEKLIPLFVTNLLDGG--TLPLYG------DGANV 214

Query: 120 RDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           R+++H  D   G    L          E+Y++G G   +  E+      + G 
Sbjct: 215 REWVHTDDHCRGIALVLAG----GRAGEIYHIGGGLELTNRELTGILLDSLGA 263

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  115 bits (287), Expect = 2e-31
 Identities = 113/173 (65%), Positives = 132/173 (76%), Gaps = 2/173 (1%)

Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFP-LEAMNPYGRTKLFIEEICRDVHRSDSEW 59
           M AHG KNLVFSSSATVYG P+ +P  E  P     NPYG++K FIEE+ RD+ ++D  W
Sbjct: 119 MKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTW 178

Query: 60  KIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGV 119
             +LLRYFNP GAH SG IGEDP+GIPNNLMP+V+QVA+GRR  L VFG DY T+DGTGV
Sbjct: 179 NAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGV 238

Query: 120 RDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           RDYIHV+DLA GHIAA  +    + GC +YNLGTG G SVL+MV A EKASGK
Sbjct: 239 RDYIHVVDLAKGHIAA-LRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGK 290

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score =  107 bits (268), Expect = 1e-28
 Identities = 35/179 (19%), Positives = 59/179 (32%), Gaps = 22/179 (12%)

Query: 1   MAAHGCKN---LVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDS 57
           +   G +       +S++ +YG  + +P  E  P    +PY   KL+   I  +   S  
Sbjct: 116 IRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYG 175

Query: 58  EWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGT 117
                    FN    H S + GE    +   +   +  +A G    L   G   S +D  
Sbjct: 176 -MYACNGILFN----HESPRRGET--FVTRKITRAIANIAQGLESCL-YLGNMDSLRDWG 227

Query: 118 GVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKVHIF 176
             +DY+ +  +                  E + + TG   SV + V       G    F
Sbjct: 228 HAKDYVKMQWMMLQQEQP-----------EDFVIATGVQYSVRQFVEMAAAQLGIKLRF 275

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  107 bits (266), Expect = 2e-28
 Identities = 100/180 (55%), Positives = 126/180 (70%), Gaps = 8/180 (4%)

Query: 1   MAAHGCKNLVFSSSATVYG----WPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD 56
           M  +     VFSSSATVYG    +P ++P  EE PL   NPYG TK  IE I  D++ SD
Sbjct: 112 MQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSD 171

Query: 57  SE-WKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKD 115
            + WK  +LRYFNP+GAHPSG IGEDP GIPNNL+P++ QVAVGRR +L +FG DY ++D
Sbjct: 172 KKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRD 231

Query: 116 GTGVRDYIHVIDLADGHIAALH---KLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           GT +RDYIHV+DLA GHIAAL      ++ +  C  +NLG+GKG++V E+  AF KASG 
Sbjct: 232 GTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGI 291

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  104 bits (260), Expect = 1e-27
 Identities = 42/177 (23%), Positives = 72/177 (40%), Gaps = 27/177 (15%)

Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEF-----PLEAMNPYGRTKLFIEEICRDVHRS 55
               G + L+ +S++ VYG P+V P +E++     P+     Y   K   E +C    + 
Sbjct: 103 AKRVGAR-LLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQ 161

Query: 56  DSEWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKD 115
           +   ++ + R FN  G         D R + N    F+ Q   G    LTV+G       
Sbjct: 162 E-GVEVRVARIFNTFGPRMHM---NDGRVVSN----FILQALQGE--PLTVYG------S 205

Query: 116 GTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           G+  R + +V DL +G +A ++            NLG  +  ++LE     +   G 
Sbjct: 206 GSQTRAFQYVSDLVNGLVALMNSNV-----SSPVNLGNPEEHTILEFAQLIKNLVGS 257

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score =  104 bits (260), Expect = 2e-27
 Identities = 34/172 (19%), Positives = 55/172 (31%), Gaps = 32/172 (18%)

Query: 1   MAAHGCKNLVFSSSATVYGWPKVVP----------CTEEFPLEAMNPYGRTKLFIEEICR 50
                       S+  VYG                 TE       +PY  +K   + + R
Sbjct: 120 EDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVR 179

Query: 51  DVHRSDSEWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTD 110
              R+      I+    N  G          P   P  L+P V   A+  +P L ++G  
Sbjct: 180 AWRRT-YGLPTIVTNCSNNYG----------PYHFPEKLIPLVILNALEGKP-LPIYG-- 225

Query: 111 YSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEM 162
                G  +RD+++V D A      + +        E YN+G       L++
Sbjct: 226 ----KGDQIRDWLYVEDHARALHMVVTE----GKAGETYNIGGHNEKKNLDV 269

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

 Score = 89.8 bits (221), Expect = 6e-22
 Identities = 62/174 (35%), Positives = 81/174 (46%), Gaps = 20/174 (11%)

Query: 18  YGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGK 77
                  P          +PYG +KL  E + RD   +    K I LRYFN  GAH  G 
Sbjct: 155 SVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAYG-IKGICLRYFNACGAHEDGD 213

Query: 78  IGEDPRG----IPNNLMPFVTQVAVGRRP----------ELTVFGTDYSTKDGTGVRDYI 123
           IGE  +G    IP  L   ++ +A  +R            + +FGTDY T DGT VRDY+
Sbjct: 214 IGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYV 273

Query: 124 HVIDLADGHIAALHKLDDPKIGC-----EVYNLGTGKGTSVLEMVAAFEKASGK 172
           HV DLA  HI AL  ++            V+NLGT +G SV E++    K +G 
Sbjct: 274 HVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIEVARKTTGH 327

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 88.5 bits (218), Expect = 1e-21
 Identities = 36/175 (20%), Positives = 68/175 (38%), Gaps = 16/175 (9%)

Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
                 ++  +++S++ YG    +P  E+   + ++PY  TK   E       R    + 
Sbjct: 129 ARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRC-YGFS 187

Query: 61  IILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVR 120
            I LRYFN  G        +DP G    ++P  T   +     + + G      DG   R
Sbjct: 188 TIGLRYFNVFGRR------QDPNGAYAAVIPKWTSSMIQGDD-VYING------DGETSR 234

Query: 121 DYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKVHI 175
           D+ ++ +    ++ A           +VYN+  G  TS+ ++  A      +  +
Sbjct: 235 DFCYIENTVQANLLAATA--GLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGV 287

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 83.8 bits (206), Expect = 5e-20
 Identities = 29/177 (16%), Positives = 57/177 (32%), Gaps = 9/177 (5%)

Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAM-----NPYGRTKLFIEEICRDVHRS 55
              +    L+F  S+ +Y      P  E   L+        PY   K+   ++C   +R 
Sbjct: 93  AHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQ 152

Query: 56  DSEWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKD 115
                   +   N  G H +         +   L+    +    + P++ V+G+    ++
Sbjct: 153 YG-RDYRSVMPTNLYGPHDNFHPSN--SHVIPALLRRFHEATAQKAPDVVVWGSGTPMRE 209

Query: 116 GTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
              V D                 L++ +      N+GTG   ++ E+     K  G 
Sbjct: 210 FLHVDDMAAASIHVMELAHE-VWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGY 265

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.2 bits (199), Expect = 6e-19
 Identities = 21/125 (16%), Positives = 45/125 (36%), Gaps = 8/125 (6%)

Query: 4   HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIIL 63
                   +S++ +YG  + +P  E  P    +PYG  KL+   I  +   + + + +  
Sbjct: 123 INSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVN- 181

Query: 64  LRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYI 123
              FN                +   +   V ++ +G+       G   + +D    +DY+
Sbjct: 182 GILFNHESPRRG------ANFVTRKISRSVAKIYLGQLE-CFSLGNLDAKRDWGHAKDYV 234

Query: 124 HVIDL 128
             + L
Sbjct: 235 EAMWL 239

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 75.0 bits (183), Expect = 7e-17
 Identities = 28/162 (17%), Positives = 54/162 (33%), Gaps = 19/162 (11%)

Query: 11  FSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPV 70
            +S++ ++G  +     E  P    +PYG  KL+   I  +   S           FN  
Sbjct: 121 QASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESFG-LHASSGILFNHE 179

Query: 71  GAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLAD 130
                         +   +   V ++ +G++ EL +        +    RD+    D  +
Sbjct: 180 SPLR------GIEFVTRKVTDAVARIKLGKQQELRLG-------NVDAKRDWGFAGDYVE 226

Query: 131 GHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
                L +        + Y + TG  T+V +M     +  G 
Sbjct: 227 AMWLMLQQDK-----ADDYVVATGVTTTVRDMCQIAFEHVGL 263

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 71.9 bits (175), Expect = 1e-15
 Identities = 33/179 (18%), Positives = 58/179 (32%), Gaps = 25/179 (13%)

Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCT-------EEFPLEAMNPYGRTKLFIEEICRDVH 53
              +G K   ++SSA +Y   K +  T       + +P E  + +G  KL  EE+C+  +
Sbjct: 118 ARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYN 177

Query: 54  RSDSEWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYST 113
           +     +  + R+ N  G                         A   R   T        
Sbjct: 178 KD-FGIECRIGRFHNIYGPF------------GTWKGGREKAPAAFCRKAQTSTDRFEMW 224

Query: 114 KDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
            DG   R +  + +  +G +             E  N+G+ +  S+ EM         K
Sbjct: 225 GDGLQTRSFTFIDECVEGVLRLTK-----SDFREPVNIGSDEMVSMNEMAEMVLSFEEK 278

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 63.9 bits (154), Expect = 8e-13
 Identities = 32/169 (18%), Positives = 50/169 (29%), Gaps = 19/169 (11%)

Query: 8   NLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYF 67
           +L        +G       T E      +PY  TK   + I +   RS    K  +    
Sbjct: 129 DLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSFG-VKATISNCS 187

Query: 68  NPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVID 127
           N  G          P       +P      +       ++G      +G  VRD+IH  D
Sbjct: 188 NNYG----------PYQHIEKFIPRQITNILAGIK-PKLYG------EGKNVRDWIHTND 230

Query: 128 LADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKVHIF 176
            + G  A L K    +      + G      VLE++          +  
Sbjct: 231 HSTGVWAILTKGRMGETYLIGAD-GEKNNKEVLELILEKMGQPKDAYDH 278

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 52.0 bits (123), Expect = 9e-09
 Identities = 17/128 (13%), Positives = 38/128 (29%), Gaps = 8/128 (6%)

Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWK 60
               G     + + ++        P +E  P    +PY  +K        +   +     
Sbjct: 121 TIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREA-YGLF 179

Query: 61  IILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVR 120
                 FN                +   +   + ++ VG + +L   G   +++D     
Sbjct: 180 ACNGILFNHESPR------RGENFVTRKITRALGRIKVGLQTKL-FLGNLQASRDWGFAG 232

Query: 121 DYIHVIDL 128
           DY+  + L
Sbjct: 233 DYVEAMWL 240

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 51.7 bits (122), Expect = 1e-08
 Identities = 30/188 (15%), Positives = 55/188 (29%), Gaps = 26/188 (13%)

Query: 1   MAAHGCKNLVFSSSATVYGWPKVVPC----------------TEEFPLEAMNPYGRTKLF 44
              +   N+++SS+  VYG  +                     E   L+  +PYG +K  
Sbjct: 111 RQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGA 170

Query: 45  IEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPEL 104
            ++   D  R      ++        G   +                   ++  G     
Sbjct: 171 ADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVG----WFCQKAVEIKNGINKPF 226

Query: 105 TVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVA 164
           T+ G      +G  VRD +H  D+   +  AL  +   +              S+LE+  
Sbjct: 227 TISG------NGKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFK 280

Query: 165 AFEKASGK 172
             E     
Sbjct: 281 LLEDYCNI 288

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 43.5 bits (101), Expect = 6e-06
 Identities = 16/144 (11%), Positives = 32/144 (22%), Gaps = 6/144 (4%)

Query: 33  EAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGED----PRGIPNN 88
           +A    G  + +I     D         + +      V  +                 NN
Sbjct: 95  DAAKRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNNN 154

Query: 89  LMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEV 148
                  +          F           +       D+    +           G   
Sbjct: 155 FTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNG-HR 213

Query: 149 YNLGTGKGTSVLEMVAAFEKASGK 172
             L   +  S +++ AAF +A  +
Sbjct: 214 IALT-FETLSPVQVCAAFSRALNR 236

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 42.9 bits (99), Expect = 9e-06
 Identities = 21/160 (13%), Positives = 36/160 (22%), Gaps = 18/160 (11%)

Query: 16  TVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPS 75
            +    K     E  P +++  Y  +K   E         +          F      P+
Sbjct: 154 NLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPH-------FTLNAVLPN 206

Query: 76  GKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAA 135
             IG           P     +          G           + Y+  +D+   H+  
Sbjct: 207 YTIG-------TIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGC 259

Query: 136 LHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGKVHI 175
           L               GT        ++A F K       
Sbjct: 260 LVLPQ----IERRRVYGTAGTFDWNTVLATFRKLYPSKTF 295

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 41.7 bits (96), Expect = 2e-05
 Identities = 17/88 (19%), Positives = 31/88 (35%), Gaps = 9/88 (10%)

Query: 88  NLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCE 147
            +         G   EL V   D   +  T     +   D+A+  I A   L   +   +
Sbjct: 170 IIRAGGLLDKEGGVRELLVGKDDELLQTDTK---TVPRADVAEVCIQA---LLFEEAKNK 223

Query: 148 VYNLGT---GKGTSVLEMVAAFEKASGK 172
            ++LG+   G  T   +  A F + + +
Sbjct: 224 AFDLGSKPEGTSTPTKDFKALFSQVTSR 251

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 39.8 bits (91), Expect = 1e-04
 Identities = 12/82 (14%), Positives = 26/82 (31%), Gaps = 2/82 (2%)

Query: 91  PFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYN 150
            F   +A      +          DG     ++   D+    I ++   D   +   +Y 
Sbjct: 162 YFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSID--DPQTLNKTMYI 219

Query: 151 LGTGKGTSVLEMVAAFEKASGK 172
                  S  E++  +E+ S +
Sbjct: 220 RPPMNILSQKEVIQIWERLSEQ 241

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 37.1 bits (84), Expect = 8e-04
 Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 2/51 (3%)

Query: 122 YIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAAFEKASGK 172
           ++   D+    I A+   D   +   +Y        S+ E+VA +EK   K
Sbjct: 188 FVKEEDIGTFTIKAVD--DPRTLNKTLYLRLPANTLSLNELVALWEKKIDK 236

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	208
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.96
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.94
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.94
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.94
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.92
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.91
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.91
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.91
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.9
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.9
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.89
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.87
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.87
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.87
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.85
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.84
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.81
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.8
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.76
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.75
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.65
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.51
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.45
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.35
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.34
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.1
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	98.93
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	98.89
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	98.78
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	98.62
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	96.84
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	96.61
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	96.54
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	96.51
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	96.43
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	96.42
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	96.36
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	96.35
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	96.35
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	96.31
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	96.28
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	96.25
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	96.23
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	96.2
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	96.13
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	96.1
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	95.98
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	95.95
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	95.88
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	95.87
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	95.85
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	95.84
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	95.83
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	95.8
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	95.79
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	95.78
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	95.77
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	95.76
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	95.7
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	95.62
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	95.55
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	95.5
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	95.37
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	95.29
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	95.27
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	95.13
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	95.05
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	94.99
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	94.79
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	94.78
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	94.38
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	94.27
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	94.23
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	94.16
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	94.09
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	94.09
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	94.02
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	93.65
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	93.61
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	93.32
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	93.16
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	92.92
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	92.11
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	92.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	91.71
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	91.68
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	91.65
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	91.58
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	91.5
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	87.18
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	86.99
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	86.75
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	83.94
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	81.97

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.96  E-value=9.7e-29  Score=198.37  Aligned_cols=154  Identities=28%  Similarity=0.418  Sum_probs=137.1

Q ss_pred             CccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCC
Q 028478            1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         1 a~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      |++.++++|||+||+++||.....+++|+++..|.+.||.+|.++|.+++.+++++ +++++++||++||||+.      
T Consensus       114 ~~~~~~~~~I~~Ss~~~yg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~lR~~~vyGp~~------  186 (322)
T d1r6da_         114 AVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTY-GLDVRITRCCNNYGPYQ------  186 (322)
T ss_dssp             HHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-CCCEEEEEECEEECTTC------
T ss_pred             HHHcCCceEEEeecceeecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCEEEEEeeeEECcCC------
Confidence            35678999999999999998888889999999999999999999999999999998 99999999999999842      


Q ss_pred             CCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCH
Q 028478           81 DPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSV  159 (208)
Q Consensus        81 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~  159 (208)
                          ..+.+++ ++.++..++  ++.++|      +|++.|+|+|++|+|+++..++++    ...+++||+++++++++
T Consensus       187 ----~~~~~i~~~i~~~~~~~--~i~v~~------~g~~~r~~i~v~D~a~ai~~~~~~----~~~~~~~ni~~~~~~s~  250 (322)
T d1r6da_         187 ----HPEKLIPLFVTNLLDGG--TLPLYG------DGANVREWVHTDDHCRGIALVLAG----GRAGEIYHIGGGLELTN  250 (322)
T ss_dssp             ----CTTSHHHHHHHHHHTTC--CEEEET------TSCCEEEEEEHHHHHHHHHHHHHH----CCTTCEEEECCCCEEEH
T ss_pred             ----CcCcHHHHHHHHHHcCC--CcEEec------CCCeEEccEEHHHHHHHHHHHHhC----CCCCCeeEEeecccchh
Confidence                1234666 778888887  799999      899999999999999999999999    34568999999999999


Q ss_pred             HHHHHHHHHHhCCCceEE
Q 028478          160 LEMVAAFEKASGKVHIFA  177 (208)
Q Consensus       160 ~e~~~~i~~~~g~~~~~~  177 (208)
                      .|+++.+.+.+|.+.+..
T Consensus       251 ~e~~~~i~~~~~~~~~~~  268 (322)
T d1r6da_         251 RELTGILLDSLGADWSSV  268 (322)
T ss_dssp             HHHHHHHHHHHTCCGGGE
T ss_pred             HHHHHHHHHHhCCCccce
Confidence            999999999999875543

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.7e-26  Score=184.64  Aligned_cols=156  Identities=25%  Similarity=0.425  Sum_probs=131.9

Q ss_pred             ccCCCCEEEEeccccccCCCCCCCCCCC-----CCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWPKVVPCTEE-----FPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSG   76 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~~~~~~E~-----~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~   76 (208)
                      ++.++ ++||+||++|||.....+++|+     ++..|.++|+.+|.++|.+++.+++.+ +++++++||++||||+.. 
T Consensus       104 ~~~~~-k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~lR~~~vyGp~~~-  180 (312)
T d2b69a1         104 KRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQE-GVEVRVARIFNTFGPRMH-  180 (312)
T ss_dssp             HHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHH-CCCEEEEEECCEECTTCC-
T ss_pred             HHcCC-cEEEEEChheecCCCCCCCCccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHh-CCcEEEEEeeeEECCCCC-
Confidence            45566 8999999999997665565554     466788999999999999999999998 999999999999998532 


Q ss_pred             CCCCCCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           77 KIGEDPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        77 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                           .  ..+.+++ ++.++..|+  ++.++|      +|.+.|+|+|++|+|++++.+++.     ..+++||++++.
T Consensus       181 -----~--~~~~~i~~~i~~~~~g~--~i~i~~------~g~~~r~~i~v~D~~~~~~~~~~~-----~~~~~~n~~~~~  240 (312)
T d2b69a1         181 -----M--NDGRVVSNFILQALQGE--PLTVYG------SGSQTRAFQYVSDLVNGLVALMNS-----NVSSPVNLGNPE  240 (312)
T ss_dssp             -----T--TCCCHHHHHHHHHHHTC--CEEEES------SSCCEEECEEHHHHHHHHHHHHTS-----SCCSCEEESCCC
T ss_pred             -----C--CCccHHHHHHHHHHcCC--CeEEeC------CCCeeEccEEHHHHHHHHHHHHhh-----ccCCceEecCCc
Confidence                 1  1234665 888888887  788889      899999999999999999999987     345789999999


Q ss_pred             CcCHHHHHHHHHHHhCCCceEEEee
Q 028478          156 GTSVLEMVAAFEKASGKVHIFALFC  180 (208)
Q Consensus       156 ~~s~~e~~~~i~~~~g~~~~~~~~~  180 (208)
                      .+++.++++.+.+.+|.+.++.+..
T Consensus       241 ~~~~~~~~~~i~~~~~~~~~~~~~~  265 (312)
T d2b69a1         241 EHTILEFAQLIKNLVGSGSEIQFLS  265 (312)
T ss_dssp             EEEHHHHHHHHHHHHTCCCCEEEEC
T ss_pred             ccchhhHHHHHHHHhCCCCceEECC
Confidence            9999999999999999988776543

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.94  E-value=8.2e-27  Score=188.35  Aligned_cols=156  Identities=23%  Similarity=0.371  Sum_probs=135.7

Q ss_pred             CccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCC
Q 028478            1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         1 a~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      |+++++++|||+||+++||.....+++|+++..|.+.|+.+|.++|.+++.+++.+ +++++++||+++||++      .
T Consensus       129 ~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~i~~~ilR~~~v~G~~------~  201 (341)
T d1sb8a_         129 ARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCY-GFSTIGLRYFNVFGRR------Q  201 (341)
T ss_dssp             HHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH-CCCCEEEEECCEECTT------C
T ss_pred             HHhcCCceEEEcccceeeCCCCCCCccCCCCCCCCCcchHHHHHHHHHHHHHHHHh-CCCeEEEEeceeeccC------c
Confidence            46789999999999999998778889999999999999999999999999999988 9999999999999984      3


Q ss_pred             CCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCH
Q 028478           81 DPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSV  159 (208)
Q Consensus        81 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~  159 (208)
                      ...+..+.+++ ++.++..|+  ++.++|      +|.+.|+|+|++|+|+++..++..+.  ...+++||++++..+|+
T Consensus       202 ~~~~~~~~~i~~~~~~~~~g~--~i~~~g------~g~~~r~~i~v~D~~~a~~~~~~~~~--~~~~~~~~~~~~~~~si  271 (341)
T d1sb8a_         202 DPNGAYAAVIPKWTSSMIQGD--DVYING------DGETSRDFCYIENTVQANLLAATAGL--DARNQVYNIAVGGRTSL  271 (341)
T ss_dssp             CCCSTTCCHHHHHHHHHHHTC--CCEEES------SSCCEECCEEHHHHHHHHHHHHTCCG--GGCSEEEEESCSCCEEH
T ss_pred             CCCCchhhhHHHHHHHHHcCC--ceEEcC------CCCEEEEEEEEeccchhhhhhhhccc--cccceeeeecccccchH
Confidence            33444456766 777788887  789999      89999999999999999999987631  24468999999999999


Q ss_pred             HHHHHHHHHHhCCC
Q 028478          160 LEMVAAFEKASGKV  173 (208)
Q Consensus       160 ~e~~~~i~~~~g~~  173 (208)
                      .|+++.|.+.++.+
T Consensus       272 ~~i~~~i~~~~~~~  285 (341)
T d1sb8a_         272 NQLFFALRDGLAEN  285 (341)
T ss_dssp             HHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhccc
Confidence            99999999988744

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.94  E-value=2e-26  Score=187.43  Aligned_cols=151  Identities=19%  Similarity=0.199  Sum_probs=128.1

Q ss_pred             CCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCCCCCCC
Q 028478            6 CKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGEDPRGI   85 (208)
Q Consensus         6 vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~~~~~~   85 (208)
                      +++|||+||++|||.....+++|+++..|.++|+.+|+++|++++.|++.+ +++++++||+++|||+.      .....
T Consensus       124 ~~r~i~~SS~~vYG~~~~~~~~E~~~~~P~~~Y~~sK~~~E~~~~~~~~~~-~l~~~ilR~~~vyGp~~------~~~~~  196 (357)
T d1db3a_         124 KTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESY-GMYACNGILFNHESPRR------GETFV  196 (357)
T ss_dssp             TCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-CCCEEEEEECCEECTTS------CTTSH
T ss_pred             CcEEEEEEchhhhCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHHh-CCCEEEEEeccccCCCC------CcCCC
Confidence            347999999999998777889999999999999999999999999999998 99999999999999842      22222


Q ss_pred             CCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHHHHHHH
Q 028478           86 PNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAA  165 (208)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~  165 (208)
                      ...+...+.+.+.++. ...++|      ++++.|+|+|++|+|+++..++++     ..++.||+++++.+|+.|+++.
T Consensus       197 ~~~i~~~~~~~~~~~~-~~~~~g------~~~~~r~~~~v~D~~~a~~~~~~~-----~~~~~yni~sg~~~s~~~~~~~  264 (357)
T d1db3a_         197 TRKITRAIANIAQGLE-SCLYLG------NMDSLRDWGHAKDYVKMQWMMLQQ-----EQPEDFVIATGVQYSVRQFVEM  264 (357)
T ss_dssp             HHHHHHHHHHHHTTSC-CCEEES------CTTCEECCEEHHHHHHHHHHTTSS-----SSCCCEEECCCCCEEHHHHHHH
T ss_pred             chHHHHHHHHHHhCCC-ceEEEC------CCCeeecceeechHHHHHHHHHhC-----CCCCeEEECCCCceehHHHHHH
Confidence            3345556777777764 445678      899999999999999999999987     3458999999999999999999


Q ss_pred             HHHHhCCCce
Q 028478          166 FEKASGKVHI  175 (208)
Q Consensus       166 i~~~~g~~~~  175 (208)
                      +.+.+|....
T Consensus       265 ~~~~~g~~~~  274 (357)
T d1db3a_         265 AAAQLGIKLR  274 (357)
T ss_dssp             HHHTTTEEEE
T ss_pred             HHHHhCCccc
Confidence            9999986544

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=3e-24  Score=173.08  Aligned_cols=179  Identities=58%  Similarity=1.012  Sum_probs=147.7

Q ss_pred             CccCCCCEEEEeccccccCCCCCCCCCCCC-CCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCC
Q 028478            1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEF-PLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIG   79 (208)
Q Consensus         1 a~~~~vk~~i~~SS~~vyg~~~~~~~~E~~-~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~   79 (208)
                      |++.+++++|++||.++|+.....+..|++ ...|.++|+.+|.++|.++..+...+.+++++++|++++||++.++.+|
T Consensus       111 ~~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~  190 (338)
T d1udca_         111 MRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMG  190 (338)
T ss_dssp             HHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSC
T ss_pred             HHHhCCCEEEecCcceEEccccccccccccccCCCcchHHHHHhhhhHHHHHHHhhccCCeEEEEeeccEEeccCCCCCC
Confidence            456799999999999999866655555554 5568999999999999999977665448999999999999998888777


Q ss_pred             CCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCH
Q 028478           80 EDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSV  159 (208)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~  159 (208)
                      ..+....+.+++.+.+.+.+...++.++|......++.+.|||+|++|+++++..+...+.. ...+++||+++++++|+
T Consensus       191 ~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd~i~v~D~~~~~~~~~~~~~~-~~~~~i~Ni~~~~~~si  269 (338)
T d1udca_         191 EDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLAN-KPGVHIYNLGAGVGNSV  269 (338)
T ss_dssp             CCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHTT-CCEEEEEEESCSSCEEH
T ss_pred             CCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceeeEEEEeehhhhcccccccccc-ccCcceeeecCCCCCcH
Confidence            77777778899977777777666899998666666789999999999999999888876432 24458999999999999


Q ss_pred             HHHHHHHHHHhCCCceEEEee
Q 028478          160 LEMVAAFEKASGKVHIFALFC  180 (208)
Q Consensus       160 ~e~~~~i~~~~g~~~~~~~~~  180 (208)
                      .|+++.+.+.+|.+.++....
T Consensus       270 ~e~~~~i~~~~g~~~~~~~~~  290 (338)
T d1udca_         270 LDVVNAFSKACGKPVNYHFAP  290 (338)
T ss_dssp             HHHHHHHHHHHTSCCCEEEEC
T ss_pred             HHHHHHHHHHHCCCCceEECC
Confidence            999999999999887766443

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.91  E-value=6.6e-25  Score=175.31  Aligned_cols=178  Identities=17%  Similarity=0.098  Sum_probs=137.3

Q ss_pred             cCCCC-EEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCCC
Q 028478            3 AHGCK-NLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         3 ~~~vk-~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      +.+++ +|+++||..+||.......+|+++..|.+.|+.+|.++|.+++.+++.+ +++++++||+++|||..      .
T Consensus       112 ~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~lr~~~vyGp~~------~  184 (321)
T d1rpna_         112 QFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESF-GLHASSGILFNHESPLR------G  184 (321)
T ss_dssp             HHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-CCCEEEEEECCEECTTS------C
T ss_pred             HhCCCcccccccchhhcCcccCCCCCCCCCccccChhHHHHHHHHHHHHHHHhhc-CCcEEEEEEecccCCCc------c
Confidence            44555 7888889999987777778999999999999999999999999999988 99999999999999842      1


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHHH
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLE  161 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e  161 (208)
                      .....+.+..++.+...++. +...+|      +|++.|+|+|++|+|+++.++++++     .++.||+++++..|+.+
T Consensus       185 ~~~~~~~i~~~~~~~~~~~~-~~i~~g------~g~~~r~~i~v~D~~~~~~~~~~~~-----~~~~~ni~~~~~~s~~~  252 (321)
T d1rpna_         185 IEFVTRKVTDAVARIKLGKQ-QELRLG------NVDAKRDWGFAGDYVEAMWLMLQQD-----KADDYVVATGVTTTVRD  252 (321)
T ss_dssp             TTSHHHHHHHHHHHHHTTSC-SCEEES------CTTCEEECEEHHHHHHHHHHHHHSS-----SCCCEEECCSCEEEHHH
T ss_pred             ccccHHHHHHHHHHHHhCCC-CcEEEC------CCCeEEccEEeHHHHHHHHHHHhcC-----CcCCceecccccceehh
Confidence            22222345557777777764 444677      8999999999999999999999982     34789999999999999


Q ss_pred             HHHHHHHHhCCCceEEEeeeehhccchhhhhhhhhhcc
Q 028478          162 MVAAFEKASGKVHIFALFCILFIHRWKLLFRFWIVFCK  199 (208)
Q Consensus       162 ~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~k  199 (208)
                      +++.+.+.+|.+.+......+...++.+....+.|..|
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~~~~~d~~k  290 (321)
T d1rpna_         253 MCQIAFEHVGLDYRDFLKIDPAFFRPAEVDVLLGNPAK  290 (321)
T ss_dssp             HHHHHHHTTTCCGGGTEEECGGGCCSSCCCBCCBCTHH
T ss_pred             hhHHHHHHhCCCccceeecCCCCCCCCccCCccCCHHH
Confidence            99999999998754333333332333344444445443

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.91  E-value=5.3e-24  Score=173.26  Aligned_cols=144  Identities=22%  Similarity=0.314  Sum_probs=123.0

Q ss_pred             CCCEEEEeccccccCCCCCCC----------CCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCC
Q 028478            5 GCKNLVFSSSATVYGWPKVVP----------CTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHP   74 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~~~~~~----------~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~   74 (208)
                      ++++||++||++|||.....+          ..|+++..|.+.||.+|.++|.+++.+.+.+ +++++++||++||||+.
T Consensus       124 ~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~-~i~~~~lR~~~vyGp~~  202 (361)
T d1kewa_         124 NNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY-GLPTIVTNCSNNYGPYH  202 (361)
T ss_dssp             HHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-CCCEEEEEECEEESTTC
T ss_pred             CceEEEEeccceeeCCCccCCccccccCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCEEEEecCceECcCC
Confidence            567999999999998543221          3466777899999999999999999999998 99999999999999841


Q ss_pred             CCCCCCCCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecC
Q 028478           75 SGKIGEDPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGT  153 (208)
Q Consensus        75 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~  153 (208)
                                ..+.+++ ++.++..|+  ++.++|      +|++.|+|+|++|+|+++..++++    ...+++||+++
T Consensus       203 ----------~~~~~i~~~i~~~~~g~--~~~v~g------~g~~~r~~i~v~D~a~ai~~~~~~----~~~~~~~Ni~s  260 (361)
T d1kewa_         203 ----------FPEKLIPLVILNALEGK--PLPIYG------KGDQIRDWLYVEDHARALHMVVTE----GKAGETYNIGG  260 (361)
T ss_dssp             ----------CTTSHHHHHHHHHHHTC--CEEEET------TSCCEEEEEEHHHHHHHHHHHHHH----CCTTCEEEECC
T ss_pred             ----------CcCcHHHHHHHHHHcCC--CcEEeC------CCCeEEeCEEHHHHHHHHHHHHhc----CCCCCeEEECC
Confidence                      1244666 788888887  788999      899999999999999999999998    34568999999


Q ss_pred             CCCcCHHHHHHHHHHHhC
Q 028478          154 GKGTSVLEMVAAFEKASG  171 (208)
Q Consensus       154 ~~~~s~~e~~~~i~~~~g  171 (208)
                      ++++++.|+++.+.+.++
T Consensus       261 ~~~~s~~~~~~~i~~~~~  278 (361)
T d1kewa_         261 HNEKKNLDVVFTICDLLD  278 (361)
T ss_dssp             CCEEEHHHHHHHHHHHHH
T ss_pred             CCCcchHHHHhHhhhhcc
Confidence            999999999999988664

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.9e-23  Score=168.65  Aligned_cols=178  Identities=64%  Similarity=1.077  Sum_probs=145.8

Q ss_pred             CccCCCCEEEEeccccccCCCCCCCC-CCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCC
Q 028478            1 MAAHGCKNLVFSSSATVYGWPKVVPC-TEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIG   79 (208)
Q Consensus         1 a~~~~vk~~i~~SS~~vyg~~~~~~~-~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~   79 (208)
                      |++.++++|+|+||+.+|+....... .+.....+.++|+.+|..+|+.+..+.+.+.+++.+++|++++||++.++.+|
T Consensus       119 ~~~~~v~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~  198 (346)
T d1ek6a_         119 MKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIG  198 (346)
T ss_dssp             HHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCC
T ss_pred             hhhcCcccccccccceeeeccccccccccccccccCChHHHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcC
Confidence            35679999999999999986544433 33334567889999999999999987664338999999999999998888888


Q ss_pred             CCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCH
Q 028478           80 EDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSV  159 (208)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~  159 (208)
                      ....+..+.+++++...+.+...++.++|.+.+..++.+.|||+|++|+|.++..++..... ...+++||++++..+++
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~Rdfi~v~D~a~~~~~~~~~~~~-~~~~~i~Ni~~~~~~s~  277 (346)
T d1ek6a_         199 EDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKE-QCGCRIYNLGTGTGYSV  277 (346)
T ss_dssp             CCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTT-TCCEEEEEECCSCCEEH
T ss_pred             ccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCCCeeEeEEEEEeccchhhhhcccccc-ccCceEEEeCCCCcccH
Confidence            77777788888876666666666899988777777899999999999999999988776432 34568999999999999


Q ss_pred             HHHHHHHHHHhCCCceEEEe
Q 028478          160 LEMVAAFEKASGKVHIFALF  179 (208)
Q Consensus       160 ~e~~~~i~~~~g~~~~~~~~  179 (208)
                      .|+++.|.+.+|.+.++...
T Consensus       278 ~dl~~~i~~~~~~~~~~~~~  297 (346)
T d1ek6a_         278 LQMVQAMEKASGKKIPYKVV  297 (346)
T ss_dssp             HHHHHHHHHHHCSCCCEEEE
T ss_pred             HHHHHHHHHHhCCCCCeEEC
Confidence            99999999999998776543

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.90  E-value=1.4e-23  Score=169.68  Aligned_cols=178  Identities=56%  Similarity=0.943  Sum_probs=142.9

Q ss_pred             CccCCCCEEEEeccccccCCCC----CCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC-CCccEEEEecccccCCCCC
Q 028478            1 MAAHGCKNLVFSSSATVYGWPK----VVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD-SEWKIILLRYFNPVGAHPS   75 (208)
Q Consensus         1 a~~~~vk~~i~~SS~~vyg~~~----~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~iiR~~~i~G~~~~   75 (208)
                      |++.++++||++||++|||...    ..+++|+.+..|.++|+.+|.++|++++.+.+.. .+++++++|++++||+...
T Consensus       112 ~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~  191 (347)
T d1z45a2         112 MQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPS  191 (347)
T ss_dssp             HHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTT
T ss_pred             HHhcccceEEeecceeeecCcccCCCCCccccccCCCCCChhHhHHHHHHHHHHHHHHhhccCCcEEEEeecceEeecCC
Confidence            4567899999999999998543    3468899999999999999999999999987532 2789999999999999888


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCC---CCCCCceEEec
Q 028478           76 GKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDD---PKIGCEVYNLG  152 (208)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~~ni~  152 (208)
                      +.+|......++.+++++.+.+.++..++.++|...+.+++...+|++++.|++.+++.+++....   ....+++||++
T Consensus       192 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~  271 (347)
T d1z45a2         192 GLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLG  271 (347)
T ss_dssp             SSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEES
T ss_pred             CccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCceeeeeeeeecccccccccccccccccccccccccceec
Confidence            777877777788899977777777666888888555556677889999999999999998876321   12346899999


Q ss_pred             CCCCcCHHHHHHHHHHHhCCCceEEE
Q 028478          153 TGKGTSVLEMVAAFEKASGKVHIFAL  178 (208)
Q Consensus       153 ~~~~~s~~e~~~~i~~~~g~~~~~~~  178 (208)
                      +++++|+.|+++.+.+.+|.+.++..
T Consensus       272 ~~~~~s~~e~~~~i~~~~~~~~~~~~  297 (347)
T d1z45a2         272 SGKGSTVFEVYHAFCKASGIDLPYKV  297 (347)
T ss_dssp             CSCCEEHHHHHHHHHHHHTCCCCC--
T ss_pred             CCCcccHHHHHHHHHHHHCCCCceEe
Confidence            99999999999999999999876653

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.90  E-value=7.1e-23  Score=166.24  Aligned_cols=161  Identities=20%  Similarity=0.269  Sum_probs=127.5

Q ss_pred             CccCCCCEEEEeccccccCCCCCCCC-------CCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCC
Q 028478            1 MAAHGCKNLVFSSSATVYGWPKVVPC-------TEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAH   73 (208)
Q Consensus         1 a~~~~vk~~i~~SS~~vyg~~~~~~~-------~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~   73 (208)
                      |+++++++||++||..+|+.....+.       +|..+..|.++||.+|.++|++++.+.+.+ +++++++||+++||++
T Consensus       118 ~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~-gl~~~ilR~~~vyG~~  196 (363)
T d2c5aa1         118 ARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDF-GIECRIGRFHNIYGPF  196 (363)
T ss_dssp             HHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECCEECTT
T ss_pred             HHhhCccccccccccccccccccccccccccccccCCcCCCCCHHHHHHHHHHHHHHHHHHHh-CCCEEEEEeeeEeccC
Confidence            35789999999999999985444333       345577899999999999999999999998 9999999999999985


Q ss_pred             CCCCCCCCCCCCCCChHHH-HHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEec
Q 028478           74 PSGKIGEDPRGIPNNLMPF-VTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLG  152 (208)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~  152 (208)
                      ...     ........... .......  .+...+|      +|.+.|+|+|++|+++++.++++.     ..+++||++
T Consensus       197 ~~~-----~~~~~~~~~~~~~~~~~~~--~~~~~~g------~g~~~rd~i~v~D~~~~~~~~~~~-----~~~~~~ni~  258 (363)
T d2c5aa1         197 GTW-----KGGREKAPAAFCRKAQTST--DRFEMWG------DGLQTRSFTFIDECVEGVLRLTKS-----DFREPVNIG  258 (363)
T ss_dssp             SCC-----SSSCCCHHHHHHHHHHHCS--SCEEEES------CSCCEECCEEHHHHHHHHHHHHHS-----SCCSCEEEC
T ss_pred             Ccc-----ccccccccccccccccccc--ccccccC------CCCeEEEEeehhHHHHHHHHHHhC-----CCCCeEEEe
Confidence            321     11111222223 3333333  3778888      899999999999999999999987     345899999


Q ss_pred             CCCCcCHHHHHHHHHHHhCCCceEEEee
Q 028478          153 TGKGTSVLEMVAAFEKASGKVHIFALFC  180 (208)
Q Consensus       153 ~~~~~s~~e~~~~i~~~~g~~~~~~~~~  180 (208)
                      ++..+|+.|+++.+.+.+|.+.++....
T Consensus       259 ~~~~~s~~~l~~~i~~~~g~~~~i~~~~  286 (363)
T d2c5aa1         259 SDEMVSMNEMAEMVLSFEEKKLPIHHIP  286 (363)
T ss_dssp             CCCCEEHHHHHHHHHHTTTCCCCEEEEC
T ss_pred             cCCcccHHHHHHHHHHHhCCCCceEeCC
Confidence            9999999999999999999987765443

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.9e-22  Score=162.55  Aligned_cols=152  Identities=21%  Similarity=0.256  Sum_probs=125.0

Q ss_pred             CCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCCCCCCC
Q 028478            6 CKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGEDPRGI   85 (208)
Q Consensus         6 vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~~~~~~   85 (208)
                      +++|||+||++|||.....+++|+++..|.++||.+|.++|++++.+.+.+ +++++++|++++|||+..      ....
T Consensus       125 ~~~~i~~SS~~vyg~~~~~~~~E~~~~~P~~~Yg~sK~~aE~~~~~~~~~~-~~~~~ilr~~~vyGp~~~------~~~~  197 (347)
T d1t2aa_         125 SVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAY-NLFAVNGILFNHESPRRG------ANFV  197 (347)
T ss_dssp             TCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECCEECTTSC------TTSH
T ss_pred             CcEEEEecchheecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCEEEEEecceeCCCCC------CCcc
Confidence            348999999999998777789999999999999999999999999999888 999999999999998421      2222


Q ss_pred             CCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHHHHHHH
Q 028478           86 PNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVAA  165 (208)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~  165 (208)
                      ...+...+.....+.. ++.++|      ++++.|+|+|++|+|+++..++++.     ..+.|+++.+...++.+..+.
T Consensus       198 ~~~~~~~i~~~~~~~~-~~~~~g------~g~~~r~~i~v~D~~~a~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~  265 (347)
T d1t2aa_         198 TRKISRSVAKIYLGQL-ECFSLG------NLDAKRDWGHAKDYVEAMWLMLQND-----EPEDFVIATGEVHSVREFVEK  265 (347)
T ss_dssp             HHHHHHHHHHHHHTSC-SCEEES------CTTCEECCEEHHHHHHHHHHHHHSS-----SCCCEEECCSCCEEHHHHHHH
T ss_pred             ccccceeeehhhcCCc-ceeecC------CCcceeeeeEecHHHHHHHHHhhcC-----CCccceeccccccccchhhhh
Confidence            2333333444444443 677888      8999999999999999999999982     236789999999999999999


Q ss_pred             HHHHhCCCceE
Q 028478          166 FEKASGKVHIF  176 (208)
Q Consensus       166 i~~~~g~~~~~  176 (208)
                      +...++.....
T Consensus       266 ~~~~~~~~~~~  276 (347)
T d1t2aa_         266 SFLHIGKTIVW  276 (347)
T ss_dssp             HHHHTTCCEEE
T ss_pred             hhhhhcceeee
Confidence            99999887543

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.87  E-value=6.4e-22  Score=161.78  Aligned_cols=176  Identities=39%  Similarity=0.623  Sum_probs=136.2

Q ss_pred             CccCCCCEEEEeccccccCCCCC-------CCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCC
Q 028478            1 MAAHGCKNLVFSSSATVYGWPKV-------VPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAH   73 (208)
Q Consensus         1 a~~~~vk~~i~~SS~~vyg~~~~-------~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~   73 (208)
                      |++.++++++++||..+|+....       .++.|+++..|.++|+.+|..+|.+++.+.+.+ +++++++|++++||++
T Consensus       131 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~-gl~~~~lR~~~vyG~~  209 (383)
T d1gy8a_         131 MLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY-GIKGICLRYFNACGAH  209 (383)
T ss_dssp             HHHTTCCEEEEEEEGGGTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECEEECCC
T ss_pred             hhccCCcccccccccccccccccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHh-CCCEEEEecceeeccC
Confidence            35678999999999999875332       357788889999999999999999999999998 9999999999999986


Q ss_pred             CCCCCCCCCCCCCCChHH-HHHHHH----------------hCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHh
Q 028478           74 PSGKIGEDPRGIPNNLMP-FVTQVA----------------VGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAAL  136 (208)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~-~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~  136 (208)
                      ....+.... .....+++ ++.++.                .+.  ++.++|..+.-++|.+.|||+|++|+|++++.++
T Consensus       210 ~~~~~~~~~-~~~~~~ip~ii~~~~~~~~~~~~~~~~~~~~~~~--~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~  286 (383)
T d1gy8a_         210 EDGDIGEHY-QGSTHLIPIILGRVMSDIAPDQRLTIHEDASTDK--RMPIFGTDYPTPDGTCVRDYVHVCDLASAHILAL  286 (383)
T ss_dssp             TTSSCSCCS-TTCCSHHHHHHHHHHHHHSCC-----------CC--CEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHH
T ss_pred             ccccccccc-cccchhHHHHHHHHHhhccccccchhhhhhhcCC--ceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHH
Confidence            543322111 11234444 333322                222  6788886666678999999999999999999999


Q ss_pred             hhcCCC-----CCCCceEEecCCCCcCHHHHHHHHHHHhCCCceEEEee
Q 028478          137 HKLDDP-----KIGCEVYNLGTGKGTSVLEMVAAFEKASGKVHIFALFC  180 (208)
Q Consensus       137 ~~~~~~-----~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~  180 (208)
                      +.+...     ...+++||+++++++|+.|+++.+.+.+|.+.++....
T Consensus       287 ~~~~~~~~~~~~~~~~i~Ni~s~~~~s~~el~~~i~~~~~~~~~~~~~~  335 (383)
T d1gy8a_         287 DYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIEVARKTTGHPIPVRECG  335 (383)
T ss_dssp             HHHHTCCTTTGGGSEEEEEESCSCCEEHHHHHHHHHHHHCCCCCEEEEC
T ss_pred             hhhccccccccccCccEEEeCCCCceeHHHHHHHHHHHhCCCCceEECC
Confidence            763221     23458999999999999999999999999987766443

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.87  E-value=3.2e-22  Score=159.20  Aligned_cols=164  Identities=21%  Similarity=0.309  Sum_probs=128.0

Q ss_pred             CccCCCCEEEEeccccccCCCCCCCCCCCCCCC-----CCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCC
Q 028478            1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLE-----AMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPS   75 (208)
Q Consensus         1 a~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~-----p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~   75 (208)
                      |+++++++|||+||++|||.....+++|+.+..     |.++|+.+|.++|++++.|++++ +++++++||++||||+..
T Consensus        93 a~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-gl~~~ilR~~~vyGp~~~  171 (315)
T d1e6ua_          93 AHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQY-GRDYRSVMPTNLYGPHDN  171 (315)
T ss_dssp             HHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECEEESTTCC
T ss_pred             HHHcCCCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCEEEEeeccEECCCCC
Confidence            457899999999999999977777788876543     34579999999999999999998 999999999999998532


Q ss_pred             CCCCCCCCCCCCChHH------HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCC-----CCC
Q 028478           76 GKIGEDPRGIPNNLMP------FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDD-----PKI  144 (208)
Q Consensus        76 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-----~~~  144 (208)
                            .......+..      .......+  .++.++|      ++.+.|+|+|++|+++++..++..+..     ...
T Consensus       172 ------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g------~g~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~  237 (315)
T d1e6ua_         172 ------FHPSNSHVIPALLRRFHEATAQKA--PDVVVWG------SGTPMREFLHVDDMAAASIHVMELAHEVWLENTQP  237 (315)
T ss_dssp             ------CCTTCSSHHHHHHHHHHHHHHHTC--SEEEEES------CSCCEECEEEHHHHHHHHHHHHHSCHHHHHHTSBT
T ss_pred             ------CCccccccceeeeccchhhhhccC--CceEEcC------CCceEEEEEEeehhHHHHHHhhhhccccccccccc
Confidence                  1111122222      12333333  4889998      899999999999999999999866210     113


Q ss_pred             CCceEEecCCCCcCHHHHHHHHHHHhCCCceEEEe
Q 028478          145 GCEVYNLGTGKGTSVLEMVAAFEKASGKVHIFALF  179 (208)
Q Consensus       145 ~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~  179 (208)
                      ....++++.+...++.++++.+.+.+|.+..+.+.
T Consensus       238 ~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~i~~~  272 (315)
T d1e6ua_         238 MLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFD  272 (315)
T ss_dssp             TBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEEE
T ss_pred             cccccccCCCcchHHHHHHHHHHHHhCCCcceEEC
Confidence            45789999999999999999999999998876643

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.87  E-value=1.1e-21  Score=158.28  Aligned_cols=149  Identities=24%  Similarity=0.256  Sum_probs=124.7

Q ss_pred             cCCCCEEEEeccccccCCCC------------CCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEeccccc
Q 028478            3 AHGCKNLVFSSSATVYGWPK------------VVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPV   70 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~------------~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~   70 (208)
                      +.+. ++|++||+.+||...            ....+|+++..|.+.||.+|.++|.+++.+++.+ +++++++||++||
T Consensus       113 ~~~~-k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~-~i~~~ilR~~~vy  190 (346)
T d1oc2a_         113 KYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF-GVKATISNCSNNY  190 (346)
T ss_dssp             HHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECCEE
T ss_pred             cccc-cccccccceEecccCccccccccccCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHc-CCCEEEEeeccee
Confidence            3454 899999999998421            2246778888899999999999999999999988 9999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEE
Q 028478           71 GAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYN  150 (208)
Q Consensus        71 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~n  150 (208)
                      ||+.         .....+..++.++..+.  ++.++|      ++++.|+|+|++|+|++++.++++    ...++.||
T Consensus       191 Gp~~---------~~~~~~~~~i~~~~~~~--~~~i~~------~g~~~r~~i~v~D~a~a~~~~~~~----~~~~~~~~  249 (346)
T d1oc2a_         191 GPYQ---------HIEKFIPRQITNILAGI--KPKLYG------EGKNVRDWIHTNDHSTGVWAILTK----GRMGETYL  249 (346)
T ss_dssp             STTC---------CTTSHHHHHHHHHHHTC--CCEEET------TSCCEEECEEHHHHHHHHHHHHHH----CCTTCEEE
T ss_pred             CCCC---------CccchhHHHHHHHHcCC--ceeEeC------CCCccccccchhhHHHHHHHHHhh----cccCcccc
Confidence            9841         11233444777888887  678888      899999999999999999999998    45668999


Q ss_pred             ecCCCCcCHHHHHHHHHHHhCCCc
Q 028478          151 LGTGKGTSVLEMVAAFEKASGKVH  174 (208)
Q Consensus       151 i~~~~~~s~~e~~~~i~~~~g~~~  174 (208)
                      +++++..++.++++.+.+.++.+.
T Consensus       250 ~~~~~~~~~~~~~~~i~~~~~~~~  273 (346)
T d1oc2a_         250 IGADGEKNNKEVLELILEKMGQPK  273 (346)
T ss_dssp             ECCSCEEEHHHHHHHHHHHTTCCT
T ss_pred             ccccccccchHHHHHHHHHhCCCC
Confidence            999999999999999999998753

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.85  E-value=6.2e-21  Score=152.95  Aligned_cols=151  Identities=15%  Similarity=0.131  Sum_probs=120.5

Q ss_pred             CCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            5 GCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      ...++++.||+.+|+.. ..+.+|+++..|.+.|+.+|..+|+++..+++.+ +++++++||++||||+..      ...
T Consensus       126 ~~~~~~~~ss~~~~~~~-~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~ilR~~~vyGp~~~------~~~  197 (339)
T d1n7ha_         126 RTVKYYQAGSSEMFGST-PPPQSETTPFHPRSPYAASKCAAHWYTVNYREAY-GLFACNGILFNHESPRRG------ENF  197 (339)
T ss_dssp             CCCEEEEEEEGGGGTTS-CSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECCEECTTSC------TTS
T ss_pred             cceeeeecccceecccC-CCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHh-CCCEEEEEEccccCCCCC------CCC
Confidence            34478888888888754 3468999999999999999999999999999998 999999999999998421      222


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHHHHHH
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVA  164 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~  164 (208)
                      ....+...+.+...+.. +..++|      ++.+.|||+|++|+|+++.++++++     ....++++.+...++.++++
T Consensus       198 ~~~~i~~~~~~~~~~~~-~~~~~g------~~~~~rd~~~v~D~a~~~~~~~~~~-----~~~~~~~~~~~~~s~~~~~~  265 (339)
T d1n7ha_         198 VTRKITRALGRIKVGLQ-TKLFLG------NLQASRDWGFAGDYVEAMWLMLQQE-----KPDDYVVATEEGHTVEEFLD  265 (339)
T ss_dssp             HHHHHHHHHHHHHHTSC-CCEEES------CTTCEEECEEHHHHHHHHHHHHTSS-----SCCEEEECCSCEEEHHHHHH
T ss_pred             CcchhhHHHHHHhcCCC-CeEEeC------CCCccccceeeehHHHHHHHHHhcC-----CCCccccccccccccchhhh
Confidence            22333444555555554 455668      8999999999999999999999992     23567777888899999999


Q ss_pred             HHHHHhCCCce
Q 028478          165 AFEKASGKVHI  175 (208)
Q Consensus       165 ~i~~~~g~~~~  175 (208)
                      .+.+.+|...+
T Consensus       266 ~~~~~~~~~~~  276 (339)
T d1n7ha_         266 VSFGYLGLNWK  276 (339)
T ss_dssp             HHHHHTTCCGG
T ss_pred             hhhhhhhcccC
Confidence            99999998644

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.84  E-value=2.7e-20  Score=149.63  Aligned_cols=160  Identities=14%  Similarity=0.198  Sum_probs=124.7

Q ss_pred             ccCCCCEEEEeccccccCCCCCCCCCCCC-------CCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWPKVVPCTEEF-------PLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHP   74 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~~~~~~E~~-------~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~   74 (208)
                      .+.++ +++++||+.+|+.......+|..       ...|.+.|+.+|.++|++++.+++.+ +++++++|++.+||++.
T Consensus       106 ~~~~~-~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~i~r~~~~~g~~~  183 (342)
T d2blla1         106 VKYRK-RIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE-GLQFTLFRPFNWMGPRL  183 (342)
T ss_dssp             HHTTC-EEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHH-CCCEEEEEECSEECSSC
T ss_pred             ccccc-cccccccccccccccccccccccccccccccCCCcchhhhcccchhhhhhhhhccc-CceeEEeeccccccccc
Confidence            34566 67899999999865554444432       23456789999999999999999998 99999999999999865


Q ss_pred             CCCCCCCCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecC
Q 028478           75 SGKIGEDPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGT  153 (208)
Q Consensus        75 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~  153 (208)
                      ....+...  ....+.. ++.+++.|+  ++.++|      +|++.|+|+|++|+|+++..+++++.. ...+++||+++
T Consensus       184 ~~~~~~~~--~~~~~~~~~~~~~~~g~--~~~~~~------~g~~~r~~i~v~D~~~a~~~~~~~~~~-~~~g~~~Nig~  252 (342)
T d2blla1         184 DNLNAARI--GSSRAITQLILNLVEGS--PIKLID------GGKQKRCFTDIRDGIEALYRIIENAGN-RCDGEIINIGN  252 (342)
T ss_dssp             CCTTCSBS--CBCHHHHHHHHHHHHTC--CEEEGG------GSCCEEECEEHHHHHHHHHHHHHCGGG-TTTTEEEEECC
T ss_pred             cccccccc--cccccchHHHHHHHhCC--CccccC------CCCeeeeecccccccceeeeehhhccc-cCCCeEEEEec
Confidence            54433222  1233344 788899988  788889      899999999999999999999987422 23468999987


Q ss_pred             CC-CcCHHHHHHHHHHHhCCCc
Q 028478          154 GK-GTSVLEMVAAFEKASGKVH  174 (208)
Q Consensus       154 ~~-~~s~~e~~~~i~~~~g~~~  174 (208)
                      ++ .+|+.|+++.+.+.+|...
T Consensus       253 ~~~~~t~~~l~~~i~~~~~~~~  274 (342)
T d2blla1         253 PENEASIEELGEMLLASFEKHP  274 (342)
T ss_dssp             TTSEEEHHHHHHHHHHHHHTCT
T ss_pred             ccchhHHHHHHHHHHHHhCCCc
Confidence            65 4899999999999987553

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.81  E-value=3.9e-19  Score=145.45  Aligned_cols=162  Identities=20%  Similarity=0.191  Sum_probs=116.5

Q ss_pred             ccCCCC-EEEEeccccccCCCCCCCCC--------------CCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEec
Q 028478            2 AAHGCK-NLVFSSSATVYGWPKVVPCT--------------EEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRY   66 (208)
Q Consensus         2 ~~~~vk-~~i~~SS~~vyg~~~~~~~~--------------E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~   66 (208)
                      ++.+++ +++++||..+|+.... +..              |..+..|.+.|+.+|.++|.+++.+++.+ +++++++||
T Consensus       132 ~~~~~~~~~i~~ss~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~-~l~~~~lR~  209 (393)
T d1i24a_         132 KEFGEECHLVKLGTMGEYGTPNI-DIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW-GIRATDLNQ  209 (393)
T ss_dssp             HHHCTTCEEEEECCGGGGCCCSS-CBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH-CCEEEEEEE
T ss_pred             HHhccccceeecccccccccccc-ccccccccccccccccccccccccccHHHHHhhhhccccccccccc-ceeeeeccc
Confidence            344555 5777888888874321 111              22356788999999999999999999998 999999999


Q ss_pred             ccccCCCCCCCC-------CCCCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhh
Q 028478           67 FNPVGAHPSGKI-------GEDPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHK  138 (208)
Q Consensus        67 ~~i~G~~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  138 (208)
                      +++||+......       +.........++. ++.+...++  ++.++|      ++.+.|||+|++|+|+++..++++
T Consensus       210 ~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~i~g------~~~~~rd~v~v~D~~~a~~~~~~~  281 (393)
T d1i24a_         210 GVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCVQAAVGH--PLTVYG------KGGQTRGYLDIRDTVQCVEIAIAN  281 (393)
T ss_dssp             CEEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHHHHHHTC--CEEEET------TSCCEEEEEEHHHHHHHHHHHHHS
T ss_pred             ccccCCCccccccccccccccccccccccchhhhhHHhhcCC--eeEEee------ecccccccccccchHHHHHHHHHh
Confidence            999998532110       0111222334555 777888887  899999      999999999999999999999998


Q ss_pred             cCCCCCCCceEEe--cCCCCcCHHHHHHHHHHHh---CCCceEE
Q 028478          139 LDDPKIGCEVYNL--GTGKGTSVLEMVAAFEKAS---GKVHIFA  177 (208)
Q Consensus       139 ~~~~~~~~~~~ni--~~~~~~s~~e~~~~i~~~~---g~~~~~~  177 (208)
                      +..    .+.|++  ++++.+|+.|+++.+.+..   +...+..
T Consensus       282 ~~~----~g~~~~~~~~~~~~si~el~~~i~~~~~~~~~~~~~~  321 (393)
T d1i24a_         282 PAK----AGEFRVFNQFTEQFSVNELASLVTKAGSKLGLDVKKM  321 (393)
T ss_dssp             CCC----TTCEEEEEECSEEEEHHHHHHHHHHHHHTTTCCCCEE
T ss_pred             hcc----cceeeeecCCCCeeEHHHHHHHHHHHHHhhCCCccee
Confidence            422    233333  3456789999999998864   5544444

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.80  E-value=1.1e-19  Score=142.96  Aligned_cols=150  Identities=25%  Similarity=0.305  Sum_probs=106.4

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGEDP   82 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~~~   82 (208)
                      ..++ +++++||+.+++........|+.+..|.+.|+.+|..+|.+++.+.+.+ +++++++|++++|||+.      ..
T Consensus       106 ~~~i-~~v~~ss~~~~~~~~~~~~~~~~~~~~~~~Y~~~K~~~e~~~~~~~~~~-~~~~~~~r~~~vyGp~~------~~  177 (307)
T d1eq2a_         106 EREI-PFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEA-NSQIVGFRYFNVYGPRE------GH  177 (307)
T ss_dssp             HHTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHHHHHHGGGC-SSCEEEEEECEEESSSC------GG
T ss_pred             cccc-cccccccccccccccccccccccccccccccccccchhhhhcccccccc-ccccccccceeEeeccc------cc
Confidence            4466 5777777777765555566777778899999999999999999999998 99999999999999852      22


Q ss_pred             CCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHHH
Q 028478           83 RGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLE  161 (208)
Q Consensus        83 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e  161 (208)
                      ....+.+.. ++.++..++ .+..+.|      ++.+.|+|+|++|+++++..++++     ...+.||+++++..|+.|
T Consensus       178 ~~~~~~~~~~~~~~~~~~~-~~~~~~g------~~~~~r~~~~v~d~~~~~~~~~~~-----~~~~~~~~~~~~~~si~~  245 (307)
T d1eq2a_         178 KGSMASVAFHLNTQLNNGE-SPKLFEG------SENFKRDFVYVGDVADVNLWFLEN-----GVSGIFNLGTGRAESFQA  245 (307)
T ss_dssp             GGGGSCHHHHHHHHHHC--------------------CBCEEEHHHHHHHHHHHHHH-----CCCEEEEESCSCCBCHHH
T ss_pred             ccccccccccccccccccc-ceeeecC------ccceeeeeeecccHHHHHHHHhhh-----ccccccccccccchhHHH
Confidence            222344555 455555554 3444556      788899999999999999999998     334799999999999999


Q ss_pred             HHHHHHHHhCC
Q 028478          162 MVAAFEKASGK  172 (208)
Q Consensus       162 ~~~~i~~~~g~  172 (208)
                      +++++.+..+.
T Consensus       246 i~~~i~~~~~~  256 (307)
T d1eq2a_         246 VADATLAYHKK  256 (307)
T ss_dssp             HHHHC------
T ss_pred             HHHHHHHhcCC
Confidence            99999887553

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.76  E-value=3.9e-17  Score=127.04  Aligned_cols=140  Identities=19%  Similarity=0.150  Sum_probs=118.9

Q ss_pred             CCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCCCCCCC
Q 028478            6 CKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGEDPRGI   85 (208)
Q Consensus         6 vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~~~~~~   85 (208)
                      ...++++||..+|+.....+.+|.++..|.+.|+.+|..+|++++.+     +.+.+++|++++||+.            
T Consensus        94 ~~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~~~~k~~~e~~~~~~-----~~~~~i~R~~~vyG~~------------  156 (281)
T d1vl0a_          94 GAEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKAL-----NPKYYIVRTAWLYGDG------------  156 (281)
T ss_dssp             TCEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHH-----CSSEEEEEECSEESSS------------
T ss_pred             cccccccccceeeeccccccccccccccchhhhhhhhhHHHHHHHHh-----CCCccccceeEEeCCC------------
Confidence            34788999999999888888999999999999999999999998876     7889999999999973            


Q ss_pred             CCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHHHHHH
Q 028478           86 PNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVA  164 (208)
Q Consensus        86 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~  164 (208)
                       ..+.. ++..+..+.  ++.+++        ++.++++|++|+++++..++++     ...++||+++++.+|+.|+++
T Consensus       157 -~~~~~~~~~~~~~~~--~~~~~~--------~~~~~~i~v~D~~~~~~~~~~~-----~~~g~~~~~~~~~~s~~e~~~  220 (281)
T d1vl0a_         157 -NNFVKTMINLGKTHD--ELKVVH--------DQVGTPTSTVDLARVVLKVIDE-----KNYGTFHCTCKGICSWYDFAV  220 (281)
T ss_dssp             -SCHHHHHHHHHHHCS--EEEEES--------SCEECCEEHHHHHHHHHHHHHH-----TCCEEEECCCBSCEEHHHHHH
T ss_pred             -cccccchhhhhccCC--ceeecC--------Cceeccchhhhhhhhhhhhhhh-----cccCceeEeCCCccchHHHHH
Confidence             12444 666666665  666654        5789999999999999999999     233799999999999999999


Q ss_pred             HHHHHhCCCceEEE
Q 028478          165 AFEKASGKVHIFAL  178 (208)
Q Consensus       165 ~i~~~~g~~~~~~~  178 (208)
                      .+.+.+|.+.++..
T Consensus       221 ~i~~~~g~~~~i~~  234 (281)
T d1vl0a_         221 EIFRLTGIDVKVTP  234 (281)
T ss_dssp             HHHHHHCCCCEEEE
T ss_pred             HHHHHhCCCceEEe
Confidence            99999999887754

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.75  E-value=2.6e-18  Score=138.19  Aligned_cols=149  Identities=14%  Similarity=0.077  Sum_probs=109.3

Q ss_pred             CCCCEEEEeccccccCC-CC---CCC----------------CCCCCCCCCCChHHHhHHHHHHHHHHHhhcC-CCccEE
Q 028478            4 HGCKNLVFSSSATVYGW-PK---VVP----------------CTEEFPLEAMNPYGRTKLFIEEICRDVHRSD-SEWKII   62 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~-~~---~~~----------------~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~   62 (208)
                      .+++++||+||+.+++. ..   ...                ..|+.+..|.++|+.+|..+|.+++.|.+.+ .++.++
T Consensus       122 ~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~  201 (342)
T d1y1pa1         122 PSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLN  201 (342)
T ss_dssp             TTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEE
T ss_pred             cccccccccccceeeccCCCCCCCccccccccccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcccccccc
Confidence            47999999999865432 11   111                2344455567789999999999999997765 357889


Q ss_pred             EEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCC
Q 028478           63 LLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDP  142 (208)
Q Consensus        63 iiR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~  142 (208)
                      ++||+.+|||...      +......+..++..+.++...  ...       .+.+.++|+|++|+|++++.+++++   
T Consensus       202 ~i~p~~v~Gp~~~------~~~~~~~~~~~~~~l~~g~~~--~~~-------~~~~~~~~v~v~Dva~~~i~~l~~~---  263 (342)
T d1y1pa1         202 AVLPNYTIGTIFD------PETQSGSTSGWMMSLFNGEVS--PAL-------ALMPPQYYVSAVDIGLLHLGCLVLP---  263 (342)
T ss_dssp             EEEESEEECCCSC------TTTCCCHHHHHHHHHHTTCCC--HHH-------HTCCSEEEEEHHHHHHHHHHHHHCT---
T ss_pred             eecccceeCCCCC------ccccccchHHHHHHHHcCCcC--ccc-------CCccceeeeeHHHHHHHHHHhhcCc---
Confidence            9999999998422      222233455577778777632  222       3566789999999999999999983   


Q ss_pred             CCCCceEEecCCCCcCHHHHHHHHHHHhC
Q 028478          143 KIGCEVYNLGTGKGTSVLEMVAAFEKASG  171 (208)
Q Consensus       143 ~~~~~~~ni~~~~~~s~~e~~~~i~~~~g  171 (208)
                       ..++.|++++++.+++.|++++|.+.++
T Consensus       264 -~~~g~~~~~~~~~~t~~eia~~i~k~~p  291 (342)
T d1y1pa1         264 -QIERRRVYGTAGTFDWNTVLATFRKLYP  291 (342)
T ss_dssp             -TCCSCEEEECCEEECHHHHHHHHHHHCT
T ss_pred             -cccceEEEEcCCceEHHHHHHHHHHHcC
Confidence             3345566888889999999999999874

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.65  E-value=2.4e-16  Score=125.36  Aligned_cols=162  Identities=22%  Similarity=0.262  Sum_probs=117.9

Q ss_pred             ccCCCCEEEEeccccc-cCCCCCC----------------CCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEE
Q 028478            2 AAHGCKNLVFSSSATV-YGWPKVV----------------PCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILL   64 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~v-yg~~~~~----------------~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ii   64 (208)
                      ++.+++++|+.||+.+ ++.....                ...+.++..|.+.|+.+|...|.++..+.+.+ +....++
T Consensus       111 ~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~-~~~~~~~  189 (338)
T d1orra_         111 RQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF-GLNTVVF  189 (338)
T ss_dssp             HHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH-CCEEEEE
T ss_pred             hcccccccccccccccccccccccccccccccccccccccCcccCCccccccccccccchhhhhhhhhhhcc-Ccccccc
Confidence            4557777666666544 4432221                23445566788899999999999999999988 9999999


Q ss_pred             ecccccCCCCCCCCCCCCCCCCCChHH-HHHH---HHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcC
Q 028478           65 RYFNPVGAHPSGKIGEDPRGIPNNLMP-FVTQ---VAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLD  140 (208)
Q Consensus        65 R~~~i~G~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  140 (208)
                      |++++||+...       ......++. ++..   ...+...++.++|      +|.+.|+|+|++|+|++++.+++++.
T Consensus       190 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g------~g~~~r~~~~v~D~~~~~~~~l~~~~  256 (338)
T d1orra_         190 RHSSMYGGRQF-------ATYDQGWVGWFCQKAVEIKNGINKPFTISG------NGKQVRDVLHAEDMISLYFTALANVS  256 (338)
T ss_dssp             EECCEECTTCC-------CBTTBCHHHHHHHHHHHHHTTCCCCEEEES------SSCCEEECEEHHHHHHHHHHHHHTHH
T ss_pred             cccceeecccc-------ccccccccchhhHHHHHHHhccCCceEEeC------CCceeEeeecccchhhHHHHHHhccc
Confidence            99999986422       111222333 3333   3334444899999      89999999999999999999997631


Q ss_pred             CCCCCCceEEecC--CCCcCHHHHHHHHHHHhCCCceEEEe
Q 028478          141 DPKIGCEVYNLGT--GKGTSVLEMVAAFEKASGKVHIFALF  179 (208)
Q Consensus       141 ~~~~~~~~~ni~~--~~~~s~~e~~~~i~~~~g~~~~~~~~  179 (208)
                        ...+++||+..  +..+++.|+++.+.+.+|.+.++...
T Consensus       257 --~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~  295 (338)
T d1orra_         257 --KIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNL  295 (338)
T ss_dssp             --HHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEE
T ss_pred             --cccCccccccccccccccHHHHHHHHHHHHCCCceeEeC
Confidence              24558999954  45689999999999999988776543

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.51  E-value=6.2e-14  Score=112.29  Aligned_cols=157  Identities=18%  Similarity=0.194  Sum_probs=112.3

Q ss_pred             CCCEEEEeccccccCC-CCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--------CCccEEEEecccccCCCCC
Q 028478            5 GCKNLVFSSSATVYGW-PKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--------SEWKIILLRYFNPVGAHPS   75 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~-~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--------~~~~~~iiR~~~i~G~~~~   75 (208)
                      +.+.+++.||..+++. ....+.+|+.+..|.++|+.+|..+|..+..+...+        .++.++++||+++||++. 
T Consensus       122 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~-  200 (356)
T d1rkxa_         122 GVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGD-  200 (356)
T ss_dssp             CCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTC-
T ss_pred             cccccccccccccccccccccccccccccCCCCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCc-
Confidence            3445566666555553 344567888889999999999999999998776532        167899999999999842 


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCC-CCCceEE--ec
Q 028478           76 GKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPK-IGCEVYN--LG  152 (208)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~~n--i~  152 (208)
                              .....+++.+.+...++  ...+++      .+.+.++++|++|+|+++..+++.+...+ ..+...+  ..
T Consensus       201 --------~~~~~~i~~~~~~~~~~--~~~~~~------~~~~~~~~~~v~D~~~a~~~~~~~~~~~~~~~~~~~~~~~~  264 (356)
T d1rkxa_         201 --------WALDRIVPDILRAFEQS--QPVIIR------NPHAIRPWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPN  264 (356)
T ss_dssp             --------CCSSCHHHHHHHHHHTT--CCEECS------CTTCEECCEETHHHHHHHHHHHHHHHHTCGGGCSEEECCCC
T ss_pred             --------chhhHHHHHHHHHHhCC--CceEEe------eccccccccccccccchhhhhhhhhcccccccccccccccc
Confidence                    11245667555555555  334567      78999999999999999999998743222 1123333  33


Q ss_pred             CCCCcCHHHHHHHHHHHhCCCceEEE
Q 028478          153 TGKGTSVLEMVAAFEKASGKVHIFAL  178 (208)
Q Consensus       153 ~~~~~s~~e~~~~i~~~~g~~~~~~~  178 (208)
                      .+..+++.++++.+.+.++...++..
T Consensus       265 ~~~~~~~~~~~~~i~~~~~~~~~~~~  290 (356)
T d1rkxa_         265 DADATPVKNIVEQMVKYWGEGASWQL  290 (356)
T ss_dssp             GGGCEEHHHHHHHHHHHHCTTCCEEC
T ss_pred             cccccccchhhhhhHHHhCCCccEEE
Confidence            45678999999999999998876653

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.45  E-value=8.2e-13  Score=102.68  Aligned_cols=142  Identities=23%  Similarity=0.188  Sum_probs=105.3

Q ss_pred             ccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      ++.++ ++++.||+.+|+.....+.+|+++..|.+.|+.+|..+|..++.+.     ....++|++..++..     +  
T Consensus        93 ~~~~~-~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y~~~k~~~e~~~~~~~-----~~~~~~~~~~~~~~~-----~--  159 (298)
T d1n2sa_          93 NETGA-WVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQDNC-----PKHLIFRTSWVYAGK-----G--  159 (298)
T ss_dssp             TTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHHHC-----SSEEEEEECSEECSS-----S--
T ss_pred             hcccc-ccccccccccccCCCCCCCccccccCCCchHhhhhhhhhhhHHhhh-----cccccccccceeecc-----C--
Confidence            45565 7899999999987777889999999999999999999999988763     344667777666531     1  


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHHH
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLE  161 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e  161 (208)
                           ......+.+.+.++. ++.+.        +.+.++++|+.|+++++..++.........+++||+++++.+++.+
T Consensus       160 -----~~~~~~~~~~~~~~~-~~~~~--------~~~~~~~~~~~d~~~~~~~~i~~~~~~~~~~~~~n~~~~~~~~~~~  225 (298)
T d1n2sa_         160 -----NNFAKTMLRLAKERQ-TLSVI--------NDQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAGGTTTWHD  225 (298)
T ss_dssp             -----CCHHHHHHHHHHHCS-EEEEE--------CSCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCCBSCEEHHH
T ss_pred             -----Cccchhhhhhhcccc-eeecc--------cceeecccccchHHHHHHHHHhhhhccccccccccccCCCceecHH
Confidence                 123333334444432 56554        4678899999999999998886422223456999999999999999


Q ss_pred             HHHHHHHHh
Q 028478          162 MVAAFEKAS  170 (208)
Q Consensus       162 ~~~~i~~~~  170 (208)
                      +++.+.+..
T Consensus       226 ~~~~i~~~~  234 (298)
T d1n2sa_         226 YAALVFDEA  234 (298)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHhhh
Confidence            999887764

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.35  E-value=1.4e-13  Score=107.01  Aligned_cols=145  Identities=15%  Similarity=0.064  Sum_probs=99.9

Q ss_pred             ccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      ++++++++++.||.....       ++.....+...+...+...+..+...     +++++++|++++||+..+.     
T Consensus       100 ~~~~~~~~~~~s~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~i~r~~~v~g~~~~~-----  162 (307)
T d1qyca_         100 KEVGTVKRFFPSEFGNDV-------DNVHAVEPAKSVFEVKAKVRRAIEAE-----GIPYTYVSSNCFAGYFLRS-----  162 (307)
T ss_dssp             HHHCCCSEEECSCCSSCT-------TSCCCCTTHHHHHHHHHHHHHHHHHH-----TCCBEEEECCEEHHHHTTT-----
T ss_pred             HHhccccceeeecccccc-------ccccccccccccccccccccchhhcc-----CCCceecccceecCCCccc-----
Confidence            345777888888743332       22222233345666666666665543     8999999999999974211     


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHHH
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLE  161 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e  161 (208)
                             +..+.....++.  .+.+++      ++++.++|+|++|+|++++.+++++..  ..+.+|++++++.+|+.|
T Consensus       163 -------~~~~~~~~~~~~--~~~~~~------~~~~~~~~i~v~Dva~~~~~~l~~~~~--~~~~~~~~~~~~~~s~~e  225 (307)
T d1qyca_         163 -------LAQAGLTAPPRD--KVVILG------DGNARVVFVKEEDIGTFTIKAVDDPRT--LNKTLYLRLPANTLSLNE  225 (307)
T ss_dssp             -------TTCTTCSSCCSS--EEEEET------TSCCEEEEECHHHHHHHHHTTSSCGGG--TTEEEECCCGGGEEEHHH
T ss_pred             -------hhhhhhhhhhcc--cceeee------cccccccCCcHHHHHHHHHHHhcChhh--cCceeEEeCCCCccCHHH
Confidence                   111222333444  677788      899999999999999999999987532  222456677788899999


Q ss_pred             HHHHHHHHhCCCceEEEee
Q 028478          162 MVAAFEKASGKVHIFALFC  180 (208)
Q Consensus       162 ~~~~i~~~~g~~~~~~~~~  180 (208)
                      +++.+.+.+|.+.++....
T Consensus       226 i~~~~~~~~G~~~~~~~~~  244 (307)
T d1qyca_         226 LVALWEKKIDKTLEKAYVP  244 (307)
T ss_dssp             HHHHHHHHTTSCCEEEEEC
T ss_pred             HHHHHHHHHCCCCcEEECC
Confidence            9999999999988766443

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.34  E-value=1.5e-12  Score=101.78  Aligned_cols=143  Identities=11%  Similarity=-0.026  Sum_probs=99.5

Q ss_pred             ccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCCC
Q 028478            2 AAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         2 ~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      ++.+..+++++||..+++.      .+..+..+...|..+|..++....+    . +++++++|++.+||+......   
T Consensus       103 ~~~~~~~~v~~Ss~g~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~i~r~~~~~g~~~~~~~---  168 (312)
T d1qyda_         103 KEAGNIKRFLPSEFGMDPD------IMEHALQPGSITFIDKRKVRRAIEA----A-SIPYTYVSSNMFAGYFAGSLA---  168 (312)
T ss_dssp             HHSCCCSEEECSCCSSCTT------SCCCCCSSTTHHHHHHHHHHHHHHH----T-TCCBCEEECCEEHHHHTTTSS---
T ss_pred             HHhcCCcEEEEeeccccCC------CcccccchhhhhhHHHHHHHHhhcc----c-ccceEEeccceeecCCccchh---
Confidence            3456678888888655532      2334445666777777776665543    3 899999999999996321100   


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCc-eEEecCCCCcCHH
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCE-VYNLGTGKGTSVL  160 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~-~~ni~~~~~~s~~  160 (208)
                       .    .   .......++  .+.+++      ++++.++|+|++|+|++++.++.++.   ..++ .|++++++.+|++
T Consensus       169 -~----~---~~~~~~~~~--~~~~~~------~g~~~~~~i~v~Dva~a~~~~l~~~~---~~~~~~~~~~~~~~~s~~  229 (312)
T d1qyda_         169 -Q----L---DGHMMPPRD--KVLIYG------DGNVKGIWVDEDDVGTYTIKSIDDPQ---TLNKTMYIRPPMNILSQK  229 (312)
T ss_dssp             -C----T---TCCSSCCSS--EECCBT------TSCSEEEEECHHHHHHHHHHHTTCGG---GSSSEEECCCGGGEEEHH
T ss_pred             -h----H---HHHhhhccc--cccccc------ccccccceeeHHHHHHHHHHHhcCcc---ccCceEEEeCCCcCCCHH
Confidence             0    0   000111223  677888      89999999999999999999998842   2334 5667777789999


Q ss_pred             HHHHHHHHHhCCCceEE
Q 028478          161 EMVAAFEKASGKVHIFA  177 (208)
Q Consensus       161 e~~~~i~~~~g~~~~~~  177 (208)
                      |+++.+.+.+|.+.+..
T Consensus       230 e~~~~~~~~~g~~~~~~  246 (312)
T d1qyda_         230 EVIQIWERLSEQNLDKI  246 (312)
T ss_dssp             HHHHHHHHHHTCCCEEC
T ss_pred             HHHHHHHHHHCCCCeEE
Confidence            99999999999987665

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.10  E-value=2.7e-10  Score=85.89  Aligned_cols=107  Identities=13%  Similarity=0.067  Sum_probs=73.7

Q ss_pred             CccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCc-cEEEEecccccCCCCCCCCC
Q 028478            1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEW-KIILLRYFNPVGAHPSGKIG   79 (208)
Q Consensus         1 a~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~-~~~iiR~~~i~G~~~~~~~~   79 (208)
                      |++.++++|||+||..+++.             +.+.|+.+|..+|+.++++     ++ +++|+||+.+||++.+    
T Consensus       115 a~~~~v~~fi~~Ss~~~~~~-------------~~~~Y~~~K~~~E~~l~~~-----~~~~~~IlRP~~i~G~~~~----  172 (232)
T d2bkaa1         115 AKAGGCKHFNLLSSKGADKS-------------SNFLYLQVKGEVEAKVEEL-----KFDRYSVFRPGVLLCDRQE----  172 (232)
T ss_dssp             HHHTTCCEEEEECCTTCCTT-------------CSSHHHHHHHHHHHHHHTT-----CCSEEEEEECCEEECTTGG----
T ss_pred             ccccCccccccCCccccccC-------------ccchhHHHHHHhhhccccc-----cccceEEecCceeecCCCc----
Confidence            45789999999999887653             2467999999999988764     55 4899999999997311    


Q ss_pred             CCCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecC
Q 028478           80 EDPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGT  153 (208)
Q Consensus        80 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~  153 (208)
                             ..+.. ++.......       +      .+......++++|+|++++.++..+    ..++.+.+.+
T Consensus       173 -------~~~~~~~~~~~~~~~-------~------~~~~~~~~I~~~dvA~a~i~~~~~~----~~~~~~i~~~  223 (232)
T d2bkaa1         173 -------SRPGEWLVRKFFGSL-------P------DSWASGHSVPVVTVVRAMLNNVVRP----RDKQMELLEN  223 (232)
T ss_dssp             -------GSHHHHHHHHHHCSC-------C------TTGGGGTEEEHHHHHHHHHHHHTSC----CCSSEEEEEH
T ss_pred             -------CcHHHHHHHHHhhcc-------C------CcccCCCeEEHHHHHHHHHHHHhcC----ccCCeEEEcH
Confidence                   12222 223332211       1      2333445799999999999998883    3446666653

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=2.3e-09  Score=79.05  Aligned_cols=106  Identities=21%  Similarity=0.176  Sum_probs=76.9

Q ss_pred             CccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCC
Q 028478            1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         1 a~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      |+++|++|||++||..++++....+       .....|...|..+|++++..     +++++++||+.+++...      
T Consensus        98 a~~~~v~r~i~~ss~~~~~~~~~~~-------~~~~~~~~~~~~~e~~l~~~-----~~~~tiirp~~~~~~~~------  159 (205)
T d1hdoa_          98 MKAHGVDKVVACTSAFLLWDPTKVP-------PRLQAVTDDHIRMHKVLRES-----GLKYVAVMPPHIGDQPL------  159 (205)
T ss_dssp             HHHHTCCEEEEECCGGGTSCTTCSC-------GGGHHHHHHHHHHHHHHHHT-----CSEEEEECCSEEECCCC------
T ss_pred             HHhcCCCeEEEEeeeeccCCCcccc-------ccccccchHHHHHHHHHHhc-----CCceEEEecceecCCCC------
Confidence            3578999999999988886433211       12346888999999887752     89999999999987421      


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecC
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGT  153 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~  153 (208)
                                       .+   ...+..      ++.....+++.+|+|++++.+++++   ...++.+.++.
T Consensus       160 -----------------~~---~~~~~~------~~~~~~~~i~~~DvA~~~~~~l~~~---~~~g~~~~~s~  203 (205)
T d1hdoa_         160 -----------------TG---AYTVTL------DGRGPSRVISKHDLGHFMLRCLTTD---EYDGHSTYPSH  203 (205)
T ss_dssp             -----------------CS---CCEEES------SSCSSCSEEEHHHHHHHHHHTTSCS---TTTTCEEEEEC
T ss_pred             -----------------cc---cEEEee------CCCCCCCcCCHHHHHHHHHHHhCCC---CCCCEEEecCC
Confidence                             01   223344      5677778999999999999999985   34457776664

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.89  E-value=5.1e-10  Score=82.96  Aligned_cols=94  Identities=16%  Similarity=0.150  Sum_probs=64.1

Q ss_pred             CccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCc-cEEEEecccccCCCCCCCCC
Q 028478            1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEW-KIILLRYFNPVGAHPSGKIG   79 (208)
Q Consensus         1 a~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~-~~~iiR~~~i~G~~~~~~~~   79 (208)
                      |++.++++++++||..+++.             +.+.|+.+|..+|+.+++.     ++ +++|+||+.|||+..+    
T Consensus        98 a~~~~v~~~i~~Ss~~~~~~-------------~~~~y~~~K~~~E~~l~~~-----~~~~~~I~Rp~~v~G~~~~----  155 (212)
T d2a35a1          98 ALEMGARHYLVVSALGADAK-------------SSIFYNRVKGELEQALQEQ-----GWPQLTIARPSLLFGPREE----  155 (212)
T ss_dssp             HHHTTCCEEEEECCTTCCTT-------------CSSHHHHHHHHHHHHHTTS-----CCSEEEEEECCSEESTTSC----
T ss_pred             cccccccccccccccccccc-------------cccchhHHHHHHhhhcccc-----ccccceeeCCcceeCCccc----
Confidence            46789999999999877752             2468999999999988743     45 5899999999997421    


Q ss_pred             CCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhh
Q 028478           80 EDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHK  138 (208)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  138 (208)
                        .     .+...+    ...  -..+.       .+  ....+|++|+|++++.++++
T Consensus       156 --~-----~~~~~~----~~~--~~~~~-------~~--~~~~i~v~DvA~ai~~~~~~  192 (212)
T d2a35a1         156 --F-----RLAEIL----AAP--IARIL-------PG--KYHGIEACDLARALWRLALE  192 (212)
T ss_dssp             --E-----EGGGGT----TCC--CC-----------C--HHHHHHHHHHHHHHHHHHTC
T ss_pred             --c-----cHHHHH----HHH--Hhhcc-------CC--CCcEEEHHHHHHHHHHHHcC
Confidence              0     011111    111  11111       12  23469999999999999988

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=98.78  E-value=4.6e-09  Score=83.40  Aligned_cols=145  Identities=12%  Similarity=-0.004  Sum_probs=95.0

Q ss_pred             CccCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCC
Q 028478            1 MAAHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         1 a~~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      |+++|++++++.||......         ....+...|..+|...|..+...     .++++++|++..++.......  
T Consensus        97 a~~agv~~~v~~Ss~~~~~~---------~~~~~~~~~~~~k~~~~~~~~~~-----~~~~~~vr~~~~~~~~~~~~~--  160 (350)
T d1xgka_          97 AKRAGTIQHYIYSSMPDHSL---------YGPWPAVPMWAPKFTVENYVRQL-----GLPSTFVYAGIYNNNFTSLPY--  160 (350)
T ss_dssp             HHHHSCCSEEEEEECCCGGG---------TSSCCCCTTTHHHHHHHHHHHTS-----SSCEEEEEECEEGGGCBSSSC--
T ss_pred             HHHhCCCceEEEeecccccc---------CCcccchhhhhhHHHHHHHHHhh-----ccCceeeeeceeecccccccc--
Confidence            35678889999998654431         11223456778898888776643     789999999988874211110  


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeH-HHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCH
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHV-IDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSV  159 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v-~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~  159 (208)
                        ..    +   ...........+....      +++..++++++ +|+++++..++..+. ....++.|++++ +.+|+
T Consensus       161 --~~----~---~~~~~~~~~~~~~~~~------~~~~~~~~i~~~~Dva~~v~~~l~~~~-~~~~G~~~~~~g-~~~T~  223 (350)
T d1xgka_         161 --PL----F---QMELMPDGTFEWHAPF------DPDIPLPWLDAEHDVGPALLQIFKDGP-QKWNGHRIALTF-ETLSP  223 (350)
T ss_dssp             --SS----C---BEEECTTSCEEEEESS------CTTSCEEEECHHHHHHHHHHHHHHHCH-HHHTTCEEEECS-EEECH
T ss_pred             --cc----c---cccccccccceeeecc------cCCCcceEEEeHHHHHHHHHHHHhCCh-hhcCCeEEEEeC-CcCCH
Confidence              00    0   0000111112334433      56778888886 799999999997621 123568999986 46999


Q ss_pred             HHHHHHHHHHhCCCceEEE
Q 028478          160 LEMVAAFEKASGKVHIFAL  178 (208)
Q Consensus       160 ~e~~~~i~~~~g~~~~~~~  178 (208)
                      .|+++.+.+.+|+++++..
T Consensus       224 ~eia~~l~~~~G~~v~~~~  242 (350)
T d1xgka_         224 VQVCAAFSRALNRRVTYVQ  242 (350)
T ss_dssp             HHHHHHHHHHHTSCEEEEE
T ss_pred             HHHHHHHHHHHCCcceEEE
Confidence            9999999999999877653

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.62  E-value=2.2e-08  Score=74.39  Aligned_cols=100  Identities=17%  Similarity=0.089  Sum_probs=62.9

Q ss_pred             ChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCC
Q 028478           36 NPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKD  115 (208)
Q Consensus        36 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (208)
                      ..|...+.+.+..    .... +++++++||+++||+....      .   ..        ..+....           -
T Consensus       148 ~~~~~~~~~~~~~----~~~~-~~~~~ilRp~~v~g~~~~~------~---~~--------~~~~~~~-----------~  194 (252)
T d2q46a1         148 GNILVWKRKAEQY----LADS-GTPYTIIRAGGLLDKEGGV------R---EL--------LVGKDDE-----------L  194 (252)
T ss_dssp             CCHHHHHHHHHHH----HHHS-SSCEEEEEECEEECSCTTS------S---CE--------EEESTTG-----------G
T ss_pred             cchhhhhhhhhhh----hhcc-cccceeecceEEECCCcch------h---hh--------hhccCcc-----------c
Confidence            3455555444443    3444 8999999999999974210      0   00        0111000           1


Q ss_pred             CcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC---CcCHHHHHHHHHHHhC
Q 028478          116 GTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK---GTSVLEMVAAFEKASG  171 (208)
Q Consensus       116 ~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~---~~s~~e~~~~i~~~~g  171 (208)
                      .....+++|++|+|++++.+++++.   ..+++||++++.   ..++.++.+.+.+..+
T Consensus       195 ~~~~~~~i~~~Dva~a~~~~l~~~~---~~g~~~~i~~~~~~~~~~~~~~~~lf~~i~~  250 (252)
T d2q46a1         195 LQTDTKTVPRADVAEVCIQALLFEE---AKNKAFDLGSKPEGTSTPTKDFKALFSQVTS  250 (252)
T ss_dssp             GGSSCCEEEHHHHHHHHHHHTTCGG---GTTEEEEEEECCTTTSCCCCCHHHHHTTCCC
T ss_pred             ccCCCCeEEHHHHHHHHHHHhCCcc---ccCcEEEEeeCCCCCChhHHHHHHHHHHHHh
Confidence            2334679999999999999998853   455899998643   4567777777765443

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=96.84  E-value=0.0014  Score=48.80  Aligned_cols=120  Identities=12%  Similarity=0.036  Sum_probs=73.5

Q ss_pred             CCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCC
Q 028478            5 GCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDP   82 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~   82 (208)
                      +--++|++||...+...           .....|+.+|...+.+.+.++.++  -++.+..+.||.|-.+.....+....
T Consensus       122 ~~G~IV~isS~~~~~~~-----------~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~  190 (252)
T d1zmta1         122 KSGHIIFITSATPFGPW-----------KELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEP  190 (252)
T ss_dssp             TCCEEEEECCSTTTSCC-----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHH
T ss_pred             ccceeeccccccccccc-----------ccccccccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhccc
Confidence            33489999997655321           124579999999999998887643  17999999999998753221110000


Q ss_pred             CCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           83 RGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                      .   ..-........+..  |+           +    =+...+|+|.++..++.. ...-..|+.+.+.+|..
T Consensus       191 ~---~~~~e~~~~~~~~~--pl-----------~----R~g~pedvA~~v~fL~S~-~s~~iTG~~i~vdGG~~  243 (252)
T d1zmta1         191 W---KTNPEHVAHVKKVT--AL-----------Q----RLGTQKELGELVAFLASG-SCDYLTGQVFWLAGGFP  243 (252)
T ss_dssp             H---TTCHHHHHHHHHHS--SS-----------S----SCBCHHHHHHHHHHHHTT-SCGGGTTCEEEESTTCC
T ss_pred             c---cCCHHHHHHHHhcC--CC-----------C----CCcCHHHHHHHHHHHhCc-hhcCCcCCeEEECCCce
Confidence            0   00011222222211  11           1    156789999999999865 22236678998887753

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.61  E-value=0.00066  Score=50.22  Aligned_cols=113  Identities=12%  Similarity=-0.025  Sum_probs=70.9

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      +.+-.++|++||.......           .....|+.+|.+.+.+.+.++.++  .++.+..+.||.+-.+..+     
T Consensus       121 ~~~~g~Iv~isS~~~~~~~-----------~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~-----  184 (237)
T d1uzma1         121 RNKFGRMIFIGSVSGLWGI-----------GNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTR-----  184 (237)
T ss_dssp             HTTCEEEEEECCCCC----------------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH-----
T ss_pred             ccCCCceEEEcchhhccCC-----------cccHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhh-----
Confidence            3455589999997554211           124589999999999988877653  2799999999988764210     


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                             .+...........   ++             ..-+...+|+|+++..++... .+-..|+++.+.+|.
T Consensus       185 -------~~~~~~~~~~~~~---~p-------------l~R~~~pedvA~~v~fL~S~~-s~~itG~~i~vdGG~  235 (237)
T d1uzma1         185 -------ALDERIQQGALQF---IP-------------AKRVGTPAEVAGVVSFLASED-ASYISGAVIPVDGGM  235 (237)
T ss_dssp             -------HSCHHHHHHHGGG---CT-------------TCSCBCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTT
T ss_pred             -------ccCHHHHHHHHhc---CC-------------CCCCcCHHHHHHHHHHHhCch-hcCCcCCeEEECCCC
Confidence                   0111122222221   11             112568899999999988652 234677899887764

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=96.54  E-value=0.0065  Score=44.84  Aligned_cols=111  Identities=14%  Similarity=0.076  Sum_probs=70.0

Q ss_pred             EEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCCC
Q 028478            8 NLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRGI   85 (208)
Q Consensus         8 ~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~~   85 (208)
                      .+|++||......           ......|+.+|.+.+.+.+.++.+.  -++.+..+.||.|..+..+..        
T Consensus       139 ~Ii~iss~~~~~~-----------~~~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~--------  199 (258)
T d1qsga_         139 ALLTLSYLGAERA-----------IPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGI--------  199 (258)
T ss_dssp             EEEEEECGGGTSB-----------CTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGS--------
T ss_pred             EEEEecchhhccC-----------CCCcHHHHHHHHHHHHHHHHHHHHhCccCceeeccccccccccccccc--------
Confidence            5777777543311           1124679999999999998887654  269999999999987632110        


Q ss_pred             CCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           86 PNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                       ..--.........-  |+           +    -+...+|+|.++..++... .....|+++.+-+|..
T Consensus       200 -~~~~~~~~~~~~~~--pl-----------~----R~~~peeia~~v~fL~s~~-s~~itG~~i~vDGG~~  251 (258)
T d1qsga_         200 -KDFRKMLAHCEAVT--PI-----------R----RTVTIEDVGNSAAFLCSDL-SAGISGEVVHVDGGFS  251 (258)
T ss_dssp             -TTHHHHHHHHHHHS--TT-----------S----SCCCHHHHHHHHHHHTSGG-GTTCCSCEEEESTTGG
T ss_pred             -chhhhHHHHHHhCC--CC-----------C----CCcCHHHHHHHHHHHhCch-hcCccCceEEECcCHH
Confidence             00111222222211  11           1    1567899999999998652 3346778898877753

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=96.51  E-value=0.0075  Score=44.83  Aligned_cols=117  Identities=9%  Similarity=-0.015  Sum_probs=70.9

Q ss_pred             CCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCC
Q 028478            5 GCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDP   82 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~   82 (208)
                      +..++|++||.......           .....|+.+|.+.+.+.+.++.++  .++.+..+.||.+..+......... 
T Consensus       134 ~~g~ii~isS~~~~~~~-----------~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~-  201 (258)
T d1ae1a_         134 QNGNVIFLSSIAGFSAL-----------PSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKN-  201 (258)
T ss_dssp             TSEEEEEECCGGGTSCC-----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC------------
T ss_pred             ccccccccccccccccc-----------ccchhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhh-
Confidence            34489999997765321           124689999999999999887654  2799999999999876422111100 


Q ss_pred             CCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           83 RGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                          ...-..........  |+               .-+...+|+|.++..++... .+...|+.+.+-+|.
T Consensus       202 ----~~~~~~~~~~~~~~--pl---------------gR~~~pediA~~v~fL~S~~-s~~itG~~i~vDGG~  252 (258)
T d1ae1a_         202 ----PHQKEEIDNFIVKT--PM---------------GRAGKPQEVSALIAFLCFPA-ASYITGQIIWADGGF  252 (258)
T ss_dssp             ------CHHHHHHHHHHS--TT---------------CSCBCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTG
T ss_pred             ----hhhHHHHHHHHhcC--CC---------------CCCcCHHHHHHHHHHHhChh-hCCCcCcEEEeCCCe
Confidence                00111333333211  11               12678899999999998652 223567888787654

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=96.43  E-value=0.012  Score=43.85  Aligned_cols=120  Identities=12%  Similarity=0.035  Sum_probs=73.7

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      .+--++|++||+..+-....          ....|+.+|.+.+.+.+.++.++  -++.+..+.||.+-.+.....++..
T Consensus       133 ~~~g~ii~iss~~~~~~~~~----------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~  202 (268)
T d2bgka1         133 AKKGSIVFTASISSFTAGEG----------VSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVD  202 (268)
T ss_dssp             GTCEEEEEECCGGGTCCCTT----------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCC
T ss_pred             cCCCCccccccccccccccc----------cccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCC
Confidence            34447888888655421111          12379999999999998876553  1799999999999886433222111


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCc
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGT  157 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~  157 (208)
                              .............+.               .-+...+|+|++++.++... ..-..|+++.+-+|...
T Consensus       203 --------~~~~~~~~~~~~~~~---------------gr~~~pedvA~~v~fL~S~~-s~~itGq~i~VDGG~t~  254 (268)
T d2bgka1         203 --------SSRVEELAHQAANLK---------------GTLLRAEDVADAVAYLAGDE-SKYVSGLNLVIDGGYTR  254 (268)
T ss_dssp             --------HHHHHHHHHHTCSSC---------------SCCCCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTGGG
T ss_pred             --------HHHHHHHHHhccccC---------------CCCcCHHHHHHHHHHHhChh-hCCccCceEEECcCccc
Confidence                    112222222110011               12567899999999998652 33467899999877543

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=96.42  E-value=0.0047  Score=45.93  Aligned_cols=113  Identities=12%  Similarity=0.021  Sum_probs=70.2

Q ss_pred             CCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCC
Q 028478            5 GCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDP   82 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~   82 (208)
                      +--++|++||...+..           ......|+.+|.+.+.+.+.++.++  -++.+..+-||.+-.+          
T Consensus       129 ~~G~II~isS~~~~~~-----------~~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~----------  187 (254)
T d1hdca_         129 GGGSIVNISSAAGLMG-----------LALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTP----------  187 (254)
T ss_dssp             TCEEEEEECCGGGTSC-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH----------
T ss_pred             CCCeecccccchhccc-----------ccchhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCc----------
Confidence            3348999999765422           1224689999999999998887653  1799999999988764          


Q ss_pred             CCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           83 RGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                               +............  ..      .-...|--+..+|+|.+++.++... ..-..|+++.+.+|..
T Consensus       188 ---------~~~~~~~~~~~~~--~~------~~pl~R~g~~PedvA~~v~fL~S~~-a~~itG~~i~vDGG~t  243 (254)
T d1hdca_         188 ---------MTAETGIRQGEGN--YP------NTPMGRVGNEPGEIAGAVVKLLSDT-SSYVTGAELAVDGGWT  243 (254)
T ss_dssp             ---------HHHHHTCCCSTTS--CT------TSTTSSCB-CHHHHHHHHHHHHSGG-GTTCCSCEEEESTTTT
T ss_pred             ---------cchhcCHHHHHHH--Hh------CCCCCCCCCCHHHHHHHHHHHhchh-hCCCCCceEEeCCCcc
Confidence                     2222211110000  00      0000121235799999999988652 2346789999987753

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.36  E-value=0.0024  Score=47.71  Aligned_cols=112  Identities=13%  Similarity=0.046  Sum_probs=60.4

Q ss_pred             CCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCC
Q 028478            5 GCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDP   82 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~   82 (208)
                      +--++|++||....-.           ......|+.+|.+.+.+.+.++.++  -++.+..+-||.|-.+.....     
T Consensus       136 ~~G~Iv~isS~~~~~~-----------~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~-----  199 (259)
T d1xq1a_         136 GCGNIIFMSSIAGVVS-----------ASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAV-----  199 (259)
T ss_dssp             SSCEEEEEC---------------------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC------------
T ss_pred             cccccccccccccccc-----------ccccccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhh-----
Confidence            3348999998654421           1224689999999999998877653  279999999998876531110     


Q ss_pred             CCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           83 RGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                            ......+.....   +++             .-+...+|+|.++..++.. ...-..|+.+.+.+|.
T Consensus       200 ------~~~~~~~~~~~~---~pl-------------~R~~~pedvA~~v~fL~S~-~s~~iTG~~i~vDGG~  249 (259)
T d1xq1a_         200 ------YDDEFKKVVISR---KPL-------------GRFGEPEEVSSLVAFLCMP-AASYITGQTICVDGGL  249 (259)
T ss_dssp             ----------------------------------------CCGGGGHHHHHHHTSG-GGTTCCSCEEECCCCE
T ss_pred             ------chHHHHHHHHhC---CCC-------------CCCcCHHHHHHHHHHHhCc-hhcCCcCcEEEeCCCE
Confidence                  000111111111   111             1245678999999988854 2334567888887664

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=96.35  E-value=0.0057  Score=45.25  Aligned_cols=120  Identities=11%  Similarity=-0.019  Sum_probs=70.9

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      +.+--++|++||...+-.           ......|+.+|...+.+.+.++.++  -++.+..+.||.+-.+        
T Consensus       124 ~~~~G~Ii~isS~~~~~~-----------~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~--------  184 (248)
T d2d1ya1         124 KVGGGAIVNVASVQGLFA-----------EQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATE--------  184 (248)
T ss_dssp             TTTCEEEEEECCGGGTSB-----------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH--------
T ss_pred             cccccccccccccccccc-----------ccccchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCc--------
Confidence            334448999999766521           1224689999999999988876653  1799999999888664        


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                                 +..+.......+-.... .+.  +.....-+...+|+|.++..++.. ..+-..|+.+.+.+|..
T Consensus       185 -----------~~~~~~~~~~~~~~~~~-~~~--~~~pl~R~~~pedia~~v~fL~S~-~s~~itG~~i~vDGG~t  245 (248)
T d2d1ya1         185 -----------AVLEAIALSPDPERTRR-DWE--DLHALRRLGKPEEVAEAVLFLASE-KASFITGAILPVDGGMT  245 (248)
T ss_dssp             -----------HHHHHHC--------CH-HHH--TTSTTSSCBCHHHHHHHHHHHHSG-GGTTCCSCEEEESTTGG
T ss_pred             -----------hHHHHhhcCCCHHHHHH-HHH--hcCCCCCCcCHHHHHHHHHHHhCc-hhcCCCCcEEEcCcCcc
Confidence                       11111111000000000 000  000011256789999999998865 23346778998877653

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.35  E-value=0.0051  Score=45.42  Aligned_cols=104  Identities=9%  Similarity=-0.037  Sum_probs=69.1

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      -++|++||...+-..           .....|+.+|...+.+.+.++.++  -++.+..+-||.+-.+....        
T Consensus       132 G~Ii~isS~~~~~~~-----------~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~--------  192 (244)
T d1nffa_         132 GSIINISSIEGLAGT-----------VACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDW--------  192 (244)
T ss_dssp             EEEEEECCGGGTSCC-----------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTT--------
T ss_pred             ceEEecccccccccc-----------ccccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhh--------
Confidence            479999997665321           124579999999999998887653  17999999999887652110        


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                                 . .......+             ..-+...+|+|+++..++... ..-..|+++.+.+|.
T Consensus       193 -----------~-~~~~~~~p-------------l~R~~~p~diA~~v~fL~s~~-s~~itG~~i~vDGG~  237 (244)
T d1nffa_         193 -----------V-PEDIFQTA-------------LGRAAEPVEVSNLVVYLASDE-SSYSTGAEFVVDGGT  237 (244)
T ss_dssp             -----------S-CTTCSCCS-------------SSSCBCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTG
T ss_pred             -----------h-hHHHHhcc-------------ccCCCCHHHHHHHHHHHhChh-hCCCcCCEEEECCCe
Confidence                       0 00000111             112678899999999988652 233667899887665

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=96.31  E-value=0.00079  Score=49.94  Aligned_cols=111  Identities=8%  Similarity=-0.086  Sum_probs=71.5

Q ss_pred             CCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCC
Q 028478            5 GCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDP   82 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~   82 (208)
                      +--++|++||....-..           .....|+.+|.+.+.+.+.++.++  -++.+..+.||.+-.+...       
T Consensus       128 ~~G~II~isS~~~~~~~-----------~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~-------  189 (243)
T d1q7ba_         128 RHGRIITIGSVVGTMGN-----------GGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTR-------  189 (243)
T ss_dssp             TCEEEEEECCHHHHHCC-----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH-------
T ss_pred             CCCEeeeecchhhcCCC-----------CCCHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhh-------
Confidence            33479999997655211           124689999999999998887543  1799999999988654210       


Q ss_pred             CCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           83 RGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        83 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                           .+.. .........  |+               .-+...+|+|.++..++... ..-..|+++.+.+|..
T Consensus       190 -----~~~~~~~~~~~~~~--pl---------------~R~~~pedvA~~v~fL~S~~-s~~itGq~i~vdGG~~  241 (243)
T d1q7ba_         190 -----ALSDDQRAGILAQV--PA---------------GRLGGAQEIANAVAFLASDE-AAYITGETLHVNGGMY  241 (243)
T ss_dssp             -----TSCHHHHHHHHTTC--TT---------------SSCBCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTSS
T ss_pred             -----hhhhhHHHHHHhcC--CC---------------CCCCCHHHHHHHHHHHhCch-hcCCcCCeEEECCCeE
Confidence                 0111 222222211  11               12567899999999998652 2346779998877653

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.28  E-value=0.0036  Score=46.40  Aligned_cols=111  Identities=8%  Similarity=-0.032  Sum_probs=70.6

Q ss_pred             CCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCC
Q 028478            5 GCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDP   82 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~   82 (208)
                      +--++|++||....-..           .....|+.+|.+.+.+.+.++.+.  -++.+..+.||.+-.+...       
T Consensus       137 ~~G~IVnisS~~~~~~~-----------~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~-------  198 (251)
T d2c07a1         137 RYGRIINISSIVGLTGN-----------VGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTD-------  198 (251)
T ss_dssp             TCEEEEEECCTHHHHCC-----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----------
T ss_pred             CCeEEEEECCHHhcCCC-----------CCCHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEeccccc-------
Confidence            33489999997654211           124579999999999998886643  1799999999999875311       


Q ss_pred             CCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           83 RGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                           .+..-..+...... |+           +    -+...+|+|.++..++... ..-..|+++.+.+|.
T Consensus       199 -----~~~~~~~~~~~~~~-pl-----------~----R~~~pedvA~~v~fL~S~~-s~~itG~~i~vDGG~  249 (251)
T d2c07a1         199 -----KISEQIKKNIISNI-PA-----------G----RMGTPEEVANLACFLSSDK-SGYINGRVFVIDGGL  249 (251)
T ss_dssp             ------CCHHHHHHHHTTC-TT-----------S----SCBCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTS
T ss_pred             -----ccCHHHHHHHHhcC-CC-----------C----CCcCHHHHHHHHHHHhCch-hCCCcCcEEEECCCc
Confidence                 11122222222221 11           1    1567899999999988652 233567888887664

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.25  E-value=0.012  Score=42.78  Aligned_cols=98  Identities=8%  Similarity=0.076  Sum_probs=65.2

Q ss_pred             EEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC----CCccEEEEecccccCCCCCCCCCCCCC
Q 028478            8 NLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD----SEWKIILLRYFNPVGAHPSGKIGEDPR   83 (208)
Q Consensus         8 ~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~iiR~~~i~G~~~~~~~~~~~~   83 (208)
                      ++|++||.......           .....|+.+|.+.+.+.+.++.++    .++.+..+.|+.+-.+           
T Consensus       123 ~Iv~isS~~~~~~~-----------~~~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~-----------  180 (235)
T d1ooea_         123 LLQLTGAAAAMGPT-----------PSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTP-----------  180 (235)
T ss_dssp             EEEEECCGGGGSCC-----------TTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCH-----------
T ss_pred             EEEEeccHHhcCCc-----------ccccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCc-----------
Confidence            78999997655321           224689999999999999987654    2567888888777553           


Q ss_pred             CCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEec
Q 028478           84 GIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLG  152 (208)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~  152 (208)
                              +........                 ....++..+|+++.++..+..+..+...|..+.+.
T Consensus       181 --------~~~~~~~~~-----------------~~~~~~~~~~va~~~~~~l~~~~~~~~tG~~i~v~  224 (235)
T d1ooea_         181 --------MNRKWMPNA-----------------DHSSWTPLSFISEHLLKWTTETSSRPSSGALLKIT  224 (235)
T ss_dssp             --------HHHHHSTTC-----------------CGGGCBCHHHHHHHHHHHHHCGGGCCCTTCEEEEE
T ss_pred             --------chhhhCcCC-----------------ccccCCCHHHHHHHHHHHhcCccccCCCceEEEEE
Confidence                    333333221                 12346789999999887666543334555666663

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=96.23  E-value=0.0075  Score=44.49  Aligned_cols=113  Identities=13%  Similarity=0.015  Sum_probs=65.9

Q ss_pred             CCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCC
Q 028478            5 GCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDP   82 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~   82 (208)
                      +--++|++||......           ......|+.+|.+.+.+.+.++.+.  -++.+..+.||.+-.+..+..     
T Consensus       130 ~~G~Iv~isS~~~~~~-----------~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~-----  193 (247)
T d2ew8a1         130 GWGRIINLTSTTYWLK-----------IEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEAS-----  193 (247)
T ss_dssp             TCEEEEEECCGGGGSC-----------CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC-------------
T ss_pred             CCCCccccccchhccc-----------CcccccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCcccccc-----
Confidence            3347999999765421           1224689999999999988877543  179999999998877531100     


Q ss_pred             CCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           83 RGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                            ............               .....-+...+|+|++++.++... ..-..|+++.+.+|.
T Consensus       194 ------~~~~~~~~~~~~---------------~~~l~r~~~pedvA~~v~fL~S~~-s~~itG~~i~vDGG~  244 (247)
T d2ew8a1         194 ------ALSAMFDVLPNM---------------LQAIPRLQVPLDLTGAAAFLASDD-ASFITGQTLAVDGGM  244 (247)
T ss_dssp             ----------------CT---------------TSSSCSCCCTHHHHHHHHHHTSGG-GTTCCSCEEEESSSC
T ss_pred             ------ccchhHHHHHHH---------------hccCCCCCCHHHHHHHHHHHhCch-hcCCcCCeEEECCCE
Confidence                  000000000000               001112567899999999988652 233677888887764

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=96.20  E-value=0.0011  Score=49.25  Aligned_cols=110  Identities=9%  Similarity=-0.056  Sum_probs=70.5

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      -++|++||...+-.           ......|+.+|.+.+.+.+.++.++  -++.+..+.||.+-.+...         
T Consensus       131 G~IVnisS~~~~~~-----------~~~~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~---------  190 (244)
T d1edoa_         131 GRIINIASVVGLIG-----------NIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTA---------  190 (244)
T ss_dssp             EEEEEECCTHHHHC-----------CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHH---------
T ss_pred             cEEEEEcChhhcCC-----------CCCCHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHH---------
Confidence            48999999765421           1124689999999999999887654  2799999999888654210         


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                         .+..-..+...... |+               .-+...+|+|+++..++.++...-..|+++.+.+|-
T Consensus       191 ---~~~~~~~~~~~~~~-pl---------------~R~~~p~dvA~~v~fLa~S~~a~~itG~~i~vdGG~  242 (244)
T d1edoa_         191 ---KLGEDMEKKILGTI-PL---------------GRTGQPENVAGLVEFLALSPAASYITGQAFTIDGGI  242 (244)
T ss_dssp             ---TTCHHHHHHHHTSC-TT---------------CSCBCHHHHHHHHHHHHHCSGGGGCCSCEEEESTTT
T ss_pred             ---HhhHHHHHHHHhcC-CC---------------CCCcCHHHHHHHHHHHHCCchhcCCcCCeEEeCCCe
Confidence               01111222222221 11               125678999999998865433333677888887664

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.13  E-value=0.014  Score=43.09  Aligned_cols=55  Identities=11%  Similarity=-0.025  Sum_probs=43.2

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGA   72 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~   72 (208)
                      .++|++||...+-.           ......|+.+|.+.+.+.+.++.+.+++.+..+.||.|-.+
T Consensus       149 g~Iv~isS~~~~~~-----------~~~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~  203 (259)
T d1oaaa_         149 KTVVNISSLCALQP-----------YKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDND  203 (259)
T ss_dssp             EEEEEECCGGGTSC-----------CTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSH
T ss_pred             ccccccccccccCC-----------CccchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCH
Confidence            37899998765421           12356899999999999999877656899999999888764

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=96.10  E-value=0.015  Score=42.92  Aligned_cols=111  Identities=14%  Similarity=0.034  Sum_probs=67.4

Q ss_pred             EEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC-C-CccEEEEecccccCCCCCCCCCCCCCCC
Q 028478            8 NLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD-S-EWKIILLRYFNPVGAHPSGKIGEDPRGI   85 (208)
Q Consensus         8 ~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~-~~~~~iiR~~~i~G~~~~~~~~~~~~~~   85 (208)
                      ++|++||......           ......|+.+|.+.+.+.+.++.++ | ++.+..+.||.+..+.....        
T Consensus       141 ~Iv~isS~~~~~~-----------~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~--------  201 (256)
T d1ulua_         141 GIVTLTYYASEKV-----------VPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSI--------  201 (256)
T ss_dssp             EEEEEECGGGTSB-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------------
T ss_pred             EEEEEeehHhcCC-----------CCCchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccch--------
Confidence            6888888665421           1224679999999999998887653 1 79999999998877531110        


Q ss_pred             CCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           86 PNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                       ...-.......+.-  |+               .-+...+|+|+++..++... ..-..|+++.+-+|..
T Consensus       202 -~~~~~~~~~~~~~~--pl---------------~R~~~pedvA~~v~fL~S~~-s~~itG~~i~VDGG~~  253 (256)
T d1ulua_         202 -PGFTKMYDRVAQTA--PL---------------RRNITQEEVGNLGLFLLSPL-ASGITGEVVYVDAGYH  253 (256)
T ss_dssp             ---CHHHHHHHHHHS--TT---------------SSCCCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTGG
T ss_pred             -hhhHHHHHHHHhcC--CC---------------CCCcCHHHHHHHHHHHhCch-hCCccCCeEEECcCEe
Confidence             00111222232211  11               11467899999999988652 2346778888876653

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=95.98  E-value=0.022  Score=41.69  Aligned_cols=112  Identities=11%  Similarity=0.020  Sum_probs=71.4

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC-C-CccEEEEecccccCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD-S-EWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~-~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      +.+-..++++||....+.            .....|+.+|.+.+.+.+.++.++ + ++.+..+.||.+-.+...     
T Consensus       125 ~~~~~~i~~~ss~~~~~~------------~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~-----  187 (242)
T d1ulsa_         125 EKNPGSIVLTASRVYLGN------------LGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTA-----  187 (242)
T ss_dssp             TTCCEEEEEECCGGGGCC------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTS-----
T ss_pred             ccccceeeeeccccccCC------------CCCcchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhh-----
Confidence            344446777777544331            124579999999999998876543 1 799999999999765311     


Q ss_pred             CCCCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           81 DPRGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        81 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                             .+.. .........  |+               .-+...+|+|+++..++... .+-..|+++.+.+|..
T Consensus       188 -------~~~~~~~~~~~~~~--pl---------------~R~~~pedia~~v~fL~S~~-s~~itG~~i~vDGG~t  239 (242)
T d1ulsa_         188 -------KVPEKVREKAIAAT--PL---------------GRAGKPLEVAYAALFLLSDE-SSFITGQVLFVDGGRT  239 (242)
T ss_dssp             -------SSCHHHHHHHHHTC--TT---------------CSCBCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTTT
T ss_pred             -------cCCHHHHHHHHhcC--CC---------------CCCCCHHHHHHHHHHHhchh-hCCCCCcEEEECCCcc
Confidence                   1112 222332221  22               11567899999999988652 2346778998877653

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=95.95  E-value=0.0051  Score=45.68  Aligned_cols=112  Identities=9%  Similarity=0.044  Sum_probs=72.6

Q ss_pred             CCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC-C-CccEEEEecccccCCCCCCCCCCCC
Q 028478            5 GCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD-S-EWKIILLRYFNPVGAHPSGKIGEDP   82 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~-~~~~~iiR~~~i~G~~~~~~~~~~~   82 (208)
                      +-.++|++||......           ......|+.+|.+.+.+.+.++.+. + ++.+..+-||.|-.+....      
T Consensus       137 ~~g~Ii~isS~~~~~~-----------~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~------  199 (255)
T d1fmca_         137 GGGVILTITSMAAENK-----------NINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKS------  199 (255)
T ss_dssp             TCEEEEEECCGGGTCC-----------CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT------
T ss_pred             cccccccccccchhcc-----------ccccccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhc------
Confidence            3347889988765432           1224689999999999998887653 1 7999999999887642110      


Q ss_pred             CCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           83 RGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        83 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                           .+.+ ........-  |+.               -+...+|+|+++..++.. .+.-..|+++.+.+|..
T Consensus       200 -----~~~~e~~~~~~~~~--pl~---------------R~g~pedvA~~v~fL~S~-~s~~itG~~i~vDGG~~  251 (255)
T d1fmca_         200 -----VITPEIEQKMLQHT--PIR---------------RLGQPQDIANAALFLCSP-AASWVSGQILTVSGGGV  251 (255)
T ss_dssp             -----TCCHHHHHHHHHTC--SSC---------------SCBCHHHHHHHHHHHHSG-GGTTCCSCEEEESTTSC
T ss_pred             -----cCCHHHHHHHHhcC--CCC---------------CCcCHHHHHHHHHHHhCc-hhcCCcCCEEEECcCcc
Confidence                 0111 233333321  221               146789999999998865 23346779998887763

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.88  E-value=0.028  Score=40.85  Aligned_cols=96  Identities=9%  Similarity=0.057  Sum_probs=65.5

Q ss_pred             EEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC----CCccEEEEecccccCCCCCCCCCCCCC
Q 028478            8 NLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD----SEWKIILLRYFNPVGAHPSGKIGEDPR   83 (208)
Q Consensus         8 ~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~iiR~~~i~G~~~~~~~~~~~~   83 (208)
                      ++|++||.......           .....|+.||.+.+.+.+.++.+.    .++.+..+.||.+..+           
T Consensus       123 ~Iv~isS~~~~~~~-----------~~~~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~-----------  180 (236)
T d1dhra_         123 LLTLAGAKAALDGT-----------PGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTP-----------  180 (236)
T ss_dssp             EEEEECCGGGGSCC-----------TTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECH-----------
T ss_pred             ceeEEccHHHcCCc-----------cCCcccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCC-----------
Confidence            78999997655321           124689999999999999987653    2789999999888764           


Q ss_pred             CCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEe
Q 028478           84 GIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNL  151 (208)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni  151 (208)
                              +........                 ..-.++..+|+|+.+..++.... ....|+.+.+
T Consensus       181 --------~~~~~~~~~-----------------~~~~~~~pe~va~~~~~l~s~~~-~~i~G~~i~v  222 (236)
T d1dhra_         181 --------MNRKSMPEA-----------------DFSSWTPLEFLVETFHDWITGNK-RPNSGSLIQV  222 (236)
T ss_dssp             --------HHHHHSTTS-----------------CGGGSEEHHHHHHHHHHHHTTTT-CCCTTCEEEE
T ss_pred             --------cchhhCccc-----------------hhhcCCCHHHHHHHHHHHhCCCc-cCCCCCeEEE
Confidence                    322222111                 11236788999999999887632 2345565554

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.87  E-value=0.0021  Score=47.79  Aligned_cols=118  Identities=11%  Similarity=0.006  Sum_probs=67.8

Q ss_pred             EEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHH--Hhh---cCCCccEEEEecccccCCCCCCCCCCCC
Q 028478            8 NLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRD--VHR---SDSEWKIILLRYFNPVGAHPSGKIGEDP   82 (208)
Q Consensus         8 ~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~--~~~---~~~~~~~~iiR~~~i~G~~~~~~~~~~~   82 (208)
                      ++|++||...+-.           ......|+.+|.+.+.+.+.  ++.   .+ ++.+..+.||.|-.+......   .
T Consensus       130 ~Iv~isS~~~~~~-----------~~~~~~Y~asKaal~~ltrs~ala~e~~~~-gIrVN~I~PG~i~T~~~~~~~---~  194 (254)
T d2gdza1         130 IIINMSSLAGLMP-----------VAQQPVYCASKHGIVGFTRSAALAANLMNS-GVRLNAICPGFVNTAILESIE---K  194 (254)
T ss_dssp             EEEEECCGGGTSC-----------CTTCHHHHHHHHHHHHHHHHHHHHHHHHTC-CEEEEEEEESCBSSHHHHGGG---C
T ss_pred             EEEeeccHhhccC-----------CCCccchHHHHHHHHHHHHHHHHHHHhcCC-CEEEEEEEcCCCCChhhhhcc---c
Confidence            6999999765421           12245799999999988763  222   33 799999999988653100000   0


Q ss_pred             CCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcCHH
Q 028478           83 RGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVL  160 (208)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~  160 (208)
                      ................    .++             ..-+...+|+|++++.++...   ...|+++.+.+|..+.++
T Consensus       195 ~~~~~~~~~~~~~~~~----~~p-------------~~r~~~pedvA~~v~fL~s~~---~itG~~i~VdGG~~~~~~  252 (254)
T d2gdza1         195 EENMGQYIEYKDHIKD----MIK-------------YYGILDPPLIANGLITLIEDD---ALNGAIMKITTSKGIHFQ  252 (254)
T ss_dssp             HHHHGGGGGGHHHHHH----HHH-------------HHCCBCHHHHHHHHHHHHHCT---TCSSCEEEEETTTEEEEC
T ss_pred             cccccccHHHHHHHHh----cCC-------------CCCCcCHHHHHHHHHHHHcCC---CCCCCEEEECCCCeeecc
Confidence            0000000000001100    000             012457799999999999763   267799999888765443

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.85  E-value=0.012  Score=43.22  Aligned_cols=54  Identities=9%  Similarity=-0.030  Sum_probs=42.0

Q ss_pred             EEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCC
Q 028478            8 NLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGA   72 (208)
Q Consensus         8 ~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~   72 (208)
                      ++|++||...+-.           ......|+.+|.+.+.+.+.++.++  -++.+..+.||.+-.+
T Consensus       144 ~Ii~isS~~~~~~-----------~~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~  199 (248)
T d2o23a1         144 VIINTASVAAFEG-----------QVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTP  199 (248)
T ss_dssp             EEEEECCTHHHHC-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC
T ss_pred             EEEEecchhhccC-----------CCCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecc
Confidence            7999999766521           1224689999999999999887654  1789999999988765

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=95.84  E-value=0.011  Score=43.82  Aligned_cols=119  Identities=8%  Similarity=-0.071  Sum_probs=67.6

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      -++|++||......           ......|+.+|...+.+.+.++.+.  -++.+..+.||.|-.+..+.........
T Consensus       135 G~Iv~isS~~~~~~-----------~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~  203 (260)
T d1x1ta1         135 GRIINIASAHGLVA-----------SANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEK  203 (260)
T ss_dssp             EEEEEECCGGGTSC-----------CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-------------
T ss_pred             ceEeecccccceec-----------cCCcchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhh
Confidence            48999999765532           1124579999999999999887653  2799999999988765321110000000


Q ss_pred             CCCChHH--HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           85 IPNNLMP--FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        85 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                        .....  .........   +           +  ..-+...+|+|++++.++... ..-..|+++.+.+|.
T Consensus       204 --~~~~~~~~~~~~~~~~---~-----------P--l~R~g~pediA~~v~fL~S~~-a~~itG~~i~vDGG~  257 (260)
T d1x1ta1         204 --NGVDQETAARELLSEK---Q-----------P--SLQFVTPEQLGGTAVFLASDA-AAQITGTTVSVDGGW  257 (260)
T ss_dssp             -------------CHHHH---C-----------T--TCCCBCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTG
T ss_pred             --cCCChHHHHHHHHHhc---C-----------C--CCCCcCHHHHHHHHHHHhChh-hCCCcCCEEEECcch
Confidence              00000  000000000   0           0  112567899999999988652 234677888887664

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.83  E-value=0.013  Score=43.01  Aligned_cols=116  Identities=9%  Similarity=-0.051  Sum_probs=69.3

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      -++|++||...-          ..+......|+.+|.+.+.+++.++.++  .++.+..+.||.|-.+......    . 
T Consensus       126 g~Ii~isS~~~~----------~~~~~~~~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~----~-  190 (245)
T d2ag5a1         126 GNIINMSSVASS----------VKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERI----Q-  190 (245)
T ss_dssp             EEEEEECCSBTT----------TBCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHH----H-
T ss_pred             ceeeeeechhhc----------cCCccchhHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhh----h-
Confidence            378888875321          0112235689999999999999887654  2799999999988765200000    0 


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                      ...............-  |               ..-+...+|+|+++..++... +.-..|+++.+.+|.
T Consensus       191 ~~~~~~~~~~~~~~~~--p---------------l~R~~~pedva~~v~fL~s~~-s~~iTG~~i~VDGG~  243 (245)
T d2ag5a1         191 ARGNPEEARNDFLKRQ--K---------------TGRFATAEEIAMLCVYLASDE-SAYVTGNPVIIDGGW  243 (245)
T ss_dssp             HSSSHHHHHHHHHHTC--T---------------TSSCEEHHHHHHHHHHHHSGG-GTTCCSCEEEECTTG
T ss_pred             hhhhhHHHHHHHHhcC--C---------------CCCCcCHHHHHHHHHHHhChh-hCCCcCceEEeCCCc
Confidence            0000000111111111  1               112678899999999998752 234677888887765

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=95.80  E-value=0.013  Score=43.50  Aligned_cols=119  Identities=12%  Similarity=0.011  Sum_probs=71.0

Q ss_pred             CCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCC
Q 028478            6 CKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPR   83 (208)
Q Consensus         6 vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~   83 (208)
                      --++|++||....-.           ......|+.+|.+.+.+.+.++.+.  -++.+..+.||.+..+........   
T Consensus       135 ~G~Ii~isS~~~~~~-----------~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~---  200 (258)
T d1iy8a_         135 SGMVVNTASVGGIRG-----------IGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQ---  200 (258)
T ss_dssp             CCEEEEECCGGGTSB-----------CSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHH---
T ss_pred             CCCCcccccHhhccC-----------CCCchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhh---
Confidence            347999999765421           1124689999999999988876643  179999999999876410000000   


Q ss_pred             CCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           84 GIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                      .................  |+               .-+...+|+|.+++.++.. ..+-..|+++.+.+|..
T Consensus       201 ~~~~~~~~~~~~~~~~~--pl---------------~R~~~p~dvA~~v~fL~S~-~s~~itG~~i~VDGG~s  255 (258)
T d1iy8a_         201 LDPENPRKAAEEFIQVN--PS---------------KRYGEAPEIAAVVAFLLSD-DASYVNATVVPIDGGQS  255 (258)
T ss_dssp             HCTTCHHHHHHHHHTTC--TT---------------CSCBCHHHHHHHHHHHTSG-GGTTCCSCEEEESTTTT
T ss_pred             cCcccHHHHHHHHHhcC--CC---------------CCCcCHHHHHHHHHHHhCc-hhcCCcCceEEcCcchh
Confidence            00000011111222111  11               1256789999999998865 23346778998887764

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=95.79  E-value=0.0076  Score=44.59  Aligned_cols=108  Identities=7%  Similarity=-0.076  Sum_probs=66.9

Q ss_pred             EEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhh-----cCCCccEEEEecccccCCCCCCCCCCCC
Q 028478            8 NLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHR-----SDSEWKIILLRYFNPVGAHPSGKIGEDP   82 (208)
Q Consensus         8 ~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~-----~~~~~~~~iiR~~~i~G~~~~~~~~~~~   82 (208)
                      ++|++||...+-.           ......|+.+|...+.+.+.++.     .+ ++.+..+.||.|-.+.....     
T Consensus       136 ~Ii~isS~~~~~~-----------~~~~~~Y~asKaal~~lt~~lA~e~~l~~~-gIrVN~I~PG~i~T~~~~~~-----  198 (251)
T d1zk4a1         136 SIINMSSIEGFVG-----------DPSLGAYNASKGAVRIMSKSAALDCALKDY-DVRVNTVHPGYIKTPLVDDL-----  198 (251)
T ss_dssp             EEEEECCGGGTSC-----------CTTCHHHHHHHHHHHHHHHHHHHHHHHTTC-SEEEEEEEECCBCCHHHHTS-----
T ss_pred             ceEeeeccceecc-----------CCCchhHHHHHHHHhcchHHHHHHHhcCCC-cEEEEEEeCCCCCChhHHhc-----
Confidence            7899998765421           11245899999999988887653     34 79999999998876421100     


Q ss_pred             CCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           83 RGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                            .-..  ...... ..++             ..-+...+|+|+++..++... ..-..|+++.+.+|.
T Consensus       199 ------~~~~--~~~~~~-~~~p-------------l~R~~~pedvA~~v~fL~S~~-s~~itG~~i~vDGG~  248 (251)
T d1zk4a1         199 ------PGAE--EAMSQR-TKTP-------------MGHIGEPNDIAYICVYLASNE-SKFATGSEFVVDGGY  248 (251)
T ss_dssp             ------TTHH--HHHTST-TTCT-------------TSSCBCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTG
T ss_pred             ------CCHH--HHHHHH-hCCC-------------CCCCcCHHHHHHHHHHHhCch-hCCCcCcEEEECccc
Confidence                  0000  111111 0111             112678899999999988652 334667888887653

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=95.78  E-value=0.0051  Score=44.78  Aligned_cols=109  Identities=11%  Similarity=-0.054  Sum_probs=71.0

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      -++|++||...+-..           .....|+.+|.+.+.+.+.++.+.  -++.+..+-||.+-.+...         
T Consensus       127 G~Ii~isS~~~~~~~-----------~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~---------  186 (241)
T d1uaya_         127 GVIVNTASVAAFEGQ-----------IGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQ---------  186 (241)
T ss_dssp             EEEEEECCTHHHHCC-----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHH---------
T ss_pred             eeeeeecchhhccCC-----------CCchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccc---------
Confidence            379999997655211           124689999999999998887643  1799999999998764211         


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                        ..............    ++.+            -+...+|+|+++..++..   +-..|+++.+.+|..
T Consensus       187 --~~~~~~~~~~~~~~----~~~~------------R~g~pedvA~~v~fL~s~---~~iTG~~i~VDGG~~  237 (241)
T d1uaya_         187 --GLPEKAKASLAAQV----PFPP------------RLGRPEEYAALVLHILEN---PMLNGEVVRLDGALR  237 (241)
T ss_dssp             --TSCHHHHHHHHTTC----CSSC------------SCCCHHHHHHHHHHHHHC---TTCCSCEEEESTTCC
T ss_pred             --hhhhhHHHHHHhcC----CCCC------------CCcCHHHHHHHHHHHHhC---CCCCCCEEEECCccc
Confidence              01111222232221    1111            145789999999998874   236779998877754

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=95.77  E-value=0.02  Score=42.16  Aligned_cols=57  Identities=9%  Similarity=0.074  Sum_probs=41.8

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcCCCccEEEEecccccCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSDSEWKIILLRYFNPVGA   72 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~iiR~~~i~G~   72 (208)
                      ..+..++|++||+...-...           ....|+.+|...+.+.+.++..  +++++.+.||.+.+.
T Consensus       133 ~~~~~~iv~~SS~a~~~g~~-----------~~~~YaAaka~l~~la~~~~~~--Gi~v~~I~pg~~~~~  189 (259)
T d2fr1a1         133 ELDLTAFVLFSSFASAFGAP-----------GLGGYAPGNAYLDGLAQQRRSD--GLPATAVAWGTWAGS  189 (259)
T ss_dssp             TSCCSEEEEEEEHHHHTCCT-----------TCTTTHHHHHHHHHHHHHHHHT--TCCCEEEEECCBC--
T ss_pred             ccCCceEeeecchhhccCCc-----------ccHHHHHHHHhHHHHHHHHHhC--CCCEEECCCCcccCC
Confidence            34556899999876542111           1456999999999999888665  899999999988765

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.76  E-value=0.0052  Score=45.00  Aligned_cols=112  Identities=8%  Similarity=-0.022  Sum_probs=70.3

Q ss_pred             CCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCC
Q 028478            5 GCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDP   82 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~   82 (208)
                      +--++|++||......           ......|+.+|.+.+.+.+.++.++  -++.+..+.||.+-.+...       
T Consensus       116 ~~G~ii~i~S~~~~~~-----------~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~-------  177 (234)
T d1o5ia_         116 GWGRIVAITSFSVISP-----------IENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVK-------  177 (234)
T ss_dssp             TCEEEEEECCGGGTSC-----------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHH-------
T ss_pred             cccccccccccccccc-----------ccccccchhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhh-------
Confidence            3347888888665432           1234579999999998888876543  1799999999988765210       


Q ss_pred             CCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           83 RGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                          ..+-........... |+               .-+...+|+|.++..++.. ...-..|+++.+.+|.
T Consensus       178 ----~~~~~~~~~~~~~~~-pl---------------~R~~~pediA~~v~fL~S~-~s~~itG~~i~vDGG~  229 (234)
T d1o5ia_         178 ----ELLSEEKKKQVESQI-PM---------------RRMAKPEEIASVVAFLCSE-KASYLTGQTIVVDGGL  229 (234)
T ss_dssp             ----HHSCHHHHHHHHTTS-TT---------------SSCBCHHHHHHHHHHHHSG-GGTTCCSCEEEESTTC
T ss_pred             ----hhcCHHHHHHHHhcC-CC---------------CCCcCHHHHHHHHHHHhCh-hhcCCcCcEEEECccc
Confidence                000111122222221 11               1256789999999998865 2334677999887764

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=95.70  E-value=0.048  Score=40.13  Aligned_cols=119  Identities=14%  Similarity=0.011  Sum_probs=70.3

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      -++|++||....-.           ......|+.+|.+.+.+.+.++.++  -++.+..+.||.+-.+.           
T Consensus       132 g~Iv~isS~~~~~~-----------~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~-----------  189 (256)
T d1k2wa_         132 GKIINMASQAGRRG-----------EALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEH-----------  189 (256)
T ss_dssp             EEEEEECCGGGTSC-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTT-----------
T ss_pred             Cccccccchhhccc-----------cccccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchh-----------
Confidence            37999999765421           1224689999999999998877543  17999999998887752           


Q ss_pred             CCCChHHHHHHHHh--CCC-Cee-EEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCcC
Q 028478           85 IPNNLMPFVTQVAV--GRR-PEL-TVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGTS  158 (208)
Q Consensus        85 ~~~~~~~~~~~~~~--~~~-~~~-~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~s  158 (208)
                          +-........  +.. ... ..+.      ......=+...+|+|.+++.++.. ...-..|+.+.+-+|..+|
T Consensus       190 ----~~~~~~~~~~~~~~~~~~~~~~~~------~~~PlgR~~~p~evA~~v~fL~S~-~a~~iTG~~i~vDGG~~ms  256 (256)
T d1k2wa_         190 ----WDGVDAKFADYENLPRGEKKRQVG------AAVPFGRMGRAEDLTGMAIFLATP-EADYIVAQTYNVDGGNWMS  256 (256)
T ss_dssp             ----HHHHHHHHHHHHTCCTTHHHHHHH------HHSTTSSCBCHHHHHHHHHHTTSG-GGTTCCSCEEEESTTSSCC
T ss_pred             ----hhhhhhhhhhhccCChHHHHHHHH------hcCCCCCCcCHHHHHHHHHHHhCc-hhCCccCceEEECcchhhC
Confidence                1001111000  000 000 0000      000001256789999999998754 2233667999898876554

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=95.62  E-value=0.0043  Score=46.07  Aligned_cols=108  Identities=8%  Similarity=0.053  Sum_probs=68.2

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      .++|++||...+..           ......|+.+|.+...+.+.++.++  .++.+..+-||.|..+..+..   ... 
T Consensus       131 g~Ii~isS~~~~~~-----------~~~~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~---~~~-  195 (254)
T d1sbya1         131 GIIANICSVTGFNA-----------IHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTF---NSW-  195 (254)
T ss_dssp             EEEEEECCGGGTSC-----------CTTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSC---CCG-
T ss_pred             ceEEEEechhhccC-----------CCCCHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCcccccc---ccc-
Confidence            37999998766532           1224589999999999988877653  279999999999987411000   000 


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                        ......+.....+                    +.....+++|++++.+++.    ...|+++.+.+|.
T Consensus       196 --~~~~~~~~~~~~~--------------------~~~~~~e~va~~~~~~~~~----~~tG~vi~vdgG~  240 (254)
T d1sbya1         196 --LDVEPRVAELLLS--------------------HPTQTSEQCGQNFVKAIEA----NKNGAIWKLDLGT  240 (254)
T ss_dssp             --GGSCTTHHHHHTT--------------------SCCEEHHHHHHHHHHHHHH----CCTTCEEEEETTE
T ss_pred             --hhHHHHHHhcccc--------------------CCCCCHHHHHHHHHHhhhC----CCCCCEEEECCCE
Confidence              0000111111111                    2234689999999999887    4566888877663

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=95.55  E-value=0.04  Score=40.55  Aligned_cols=113  Identities=7%  Similarity=-0.031  Sum_probs=67.6

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC----CCccEEEEecccccCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD----SEWKIILLRYFNPVGAHPSGKIGEDP   82 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~iiR~~~i~G~~~~~~~~~~~   82 (208)
                      -++|++||....-.           ......|+.+|.+.+.+.+.++.+.    .++.+..+-||.+-.+          
T Consensus       131 G~Iv~isS~~~~~~-----------~~~~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~----------  189 (253)
T d1hxha_         131 GSIINMASVSSWLP-----------IEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTP----------  189 (253)
T ss_dssp             EEEEEECCGGGTSC-----------CTTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCH----------
T ss_pred             CceecccchhhhcC-----------ccccccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCH----------
Confidence            37999999765421           1224579999999999988776542    1589999999988764          


Q ss_pred             CCCCCChHHHHHHHHhCCCC-eeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           83 RGIPNNLMPFVTQVAVGRRP-ELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                               +.......... ......     .......-+...+|+|++++.++... +.-..|+++++-+|.
T Consensus       190 ---------~~~~~~~~~~~~~~~~~~-----~~~~~~gr~~~pedvA~~v~fL~S~~-s~~itG~~i~VDGG~  248 (253)
T d1hxha_         190 ---------MMQASLPKGVSKEMVLHD-----PKLNRAGRAYMPERIAQLVLFLASDE-SSVMSGSELHADNSI  248 (253)
T ss_dssp             ---------HHHHHSCTTCCHHHHBCB-----TTTBTTCCEECHHHHHHHHHHHHSGG-GTTCCSCEEEESSSC
T ss_pred             ---------hHHhhCcchhhHHHHHhC-----ccccccCCCCCHHHHHHHHHHHhChh-hCCCcCcEEEECccH
Confidence                     11111110000 000000     00000113677899999999988652 234677888886653

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.50  E-value=0.01  Score=43.65  Aligned_cols=111  Identities=9%  Similarity=-0.027  Sum_probs=70.4

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC-C-CccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD-S-EWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~-~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      -++|++||.......           .....|+.+|.+.+.+.+.++.++ + ++.+..+.||.|-.+......      
T Consensus       129 g~Ii~isS~~~~~~~-----------~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~------  191 (244)
T d1pr9a_         129 GAIVNVSSQCSQRAV-----------TNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATW------  191 (244)
T ss_dssp             EEEEEECCGGGTSCC-----------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTS------
T ss_pred             ceEeecccccccccc-----------cchhhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhc------
Confidence            478999987654321           124579999999999998887653 1 799999999988765211000      


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                        .. ..........-  |+               .-+...+|+|+++..++... ..-..|+++.+.+|.
T Consensus       192 --~~-~~~~~~~~~~~--pl---------------~R~~~peevA~~v~fL~S~~-a~~itG~~i~vDGG~  241 (244)
T d1pr9a_         192 --SD-PHKAKTMLNRI--PL---------------GKFAEVEHVVNAILFLLSDR-SGMTTGSTLPVEGGF  241 (244)
T ss_dssp             --CS-HHHHHHHHTTC--TT---------------CSCBCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTG
T ss_pred             --cC-hHHHHHHHhcC--CC---------------CCCcCHHHHHHHHHHHhCch-hCCcCCcEEEECccH
Confidence              00 01222222211  11               12577899999999988652 234667888887654

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=95.37  E-value=0.016  Score=43.07  Aligned_cols=102  Identities=10%  Similarity=-0.042  Sum_probs=59.6

Q ss_pred             CChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCeeEEEccccC
Q 028478           35 MNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYS  112 (208)
Q Consensus        35 ~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  112 (208)
                      ...|+.+|.+.+.+.+.++.++  -++.+..+.||.|-.+.......  +.................-  |+        
T Consensus       158 ~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~--~~~~~~~~~~~~~~~~~~~--Pl--------  225 (264)
T d1spxa_         158 FPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGM--PEETSKKFYSTMATMKECV--PA--------  225 (264)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC----------------HHHHHHHHHHC--TT--------
T ss_pred             chhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCC--cHHHHHHHHHHHHHHHhcC--CC--------
Confidence            3579999999999998877653  17999999999987653221100  0000111111222222211  11        


Q ss_pred             CCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478          113 TKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus       113 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                             .-+...+|+|++++.++..+.+.-..|+.+.+-+|.
T Consensus       226 -------~R~g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG~  261 (264)
T d1spxa_         226 -------GVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGS  261 (264)
T ss_dssp             -------SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTG
T ss_pred             -------CCCcCHHHHHHHHHHHhCCcccCCccCceEEeCCCh
Confidence                   115678999999999886532333677888887665

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=95.29  E-value=0.0096  Score=43.71  Aligned_cols=57  Identities=9%  Similarity=-0.003  Sum_probs=42.2

Q ss_pred             CCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCC
Q 028478            5 GCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGA   72 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~   72 (208)
                      +--++|++||...+-.           ......|+.+|.+.+.+.+.++.+.  -++.+..+.||.+-.+
T Consensus       135 ~~G~Ii~isS~~~~~~-----------~~~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~  193 (240)
T d2bd0a1         135 HSGHIFFITSVAATKA-----------FRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTP  193 (240)
T ss_dssp             TCEEEEEECCGGGTSC-----------CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCST
T ss_pred             CCCceEEEechhhcCC-----------CCCChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCc
Confidence            3348999998765532           1224689999999998888876543  1799999999988765

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=95.27  E-value=0.018  Score=42.72  Aligned_cols=110  Identities=6%  Similarity=-0.143  Sum_probs=69.2

Q ss_pred             EEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCCC
Q 028478            8 NLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRGI   85 (208)
Q Consensus         8 ~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~~   85 (208)
                      .+|++||....-.           ......|+.+|.+.+.+.+.++.++  -++.+..+-||.|-.+...          
T Consensus       139 ~Iv~isS~~~~~~-----------~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~----------  197 (261)
T d1geea_         139 TVINMSSVHEKIP-----------WPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINA----------  197 (261)
T ss_dssp             EEEEECCGGGTSC-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGH----------
T ss_pred             cccccccchhccc-----------CccccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHh----------
Confidence            5888898655421           1124579999999999988876543  1799999999988765210          


Q ss_pred             CCChH-HHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478           86 PNNLM-PFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus        86 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                       ..+. +-......... |+               .-+...+|+|++++.++.. ...-..|+++.+.+|..
T Consensus       198 -~~~~~~~~~~~~~~~~-pl---------------~R~~~pediA~~v~fL~S~-~s~~itG~~i~vDGG~s  251 (261)
T d1geea_         198 -EKFADPEQRADVESMI-PM---------------GYIGEPEEIAAVAAWLASS-EASYVTGITLFADGGMT  251 (261)
T ss_dssp             -HHHHSHHHHHHHHTTC-TT---------------SSCBCHHHHHHHHHHHHSG-GGTTCCSCEEEESTTGG
T ss_pred             -hhcCCHHHHHHHHhcC-CC---------------CCCCCHHHHHHHHHHHhCc-hhcCCcCCeEEECCCee
Confidence             0000 11112222211 11               1256789999999998865 22346779998877753

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=95.13  E-value=0.021  Score=42.28  Aligned_cols=113  Identities=14%  Similarity=-0.018  Sum_probs=70.3

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      -++|++||....-.           ......|+.+|...+.+.+.++.++  -++.+..+.||.|-.+....       .
T Consensus       138 G~Ii~isS~~~~~~-----------~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~-------~  199 (259)
T d2ae2a_         138 GNVVFISSVSGALA-----------VPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEM-------T  199 (259)
T ss_dssp             EEEEEECCGGGTSC-----------CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHH-------H
T ss_pred             cccccccccccccc-----------cccccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHh-------h
Confidence            48999999755421           1124689999999999999887654  17999999999887642100       0


Q ss_pred             CCCChH-HHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           85 IPNNLM-PFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        85 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                      ..+.-. ..+.+....-  |+               .-+...+|+|++++.++... .+-..|+++.+.+|.
T Consensus       200 ~~~~~~~~~~~~~~~~~--pl---------------~R~g~pedvA~~v~fL~S~~-s~~itG~~i~VDGG~  253 (259)
T d2ae2a_         200 IQDPEQKENLNKLIDRC--AL---------------RRMGEPKELAAMVAFLCFPA-ASYVTGQIIYVDGGL  253 (259)
T ss_dssp             TTSHHHHHHHHHHHHTS--TT---------------CSCBCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTG
T ss_pred             hhchhhHHHHHHHHhcC--CC---------------CCCcCHHHHHHHHHHHhCch-hCCCcCcEEEECCCe
Confidence            000001 1222332221  11               11567899999999988652 234677888887664

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.05  E-value=0.0097  Score=44.00  Aligned_cols=116  Identities=8%  Similarity=-0.046  Sum_probs=71.1

Q ss_pred             cCCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCC
Q 028478            3 AHGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGE   80 (208)
Q Consensus         3 ~~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~   80 (208)
                      +.+--++|++||......          +......|+.+|.+.+.+.+.++.+.  -++.+..+.||.+-.+......  
T Consensus       131 ~~~~G~Ii~i~S~~~~~~----------~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~--  198 (251)
T d1vl8a_         131 ESDNPSIINIGSLTVEEV----------TMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVF--  198 (251)
T ss_dssp             TCSSCEEEEECCGGGTCC----------CSSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHH--
T ss_pred             ccccccccccccchhccc----------cCccccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhcc--
Confidence            344458999988644210          11124579999999999998887643  1799999999988765311000  


Q ss_pred             CCCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           81 DPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                            .. ..........-  |+               .-+...+|+|++++.++... .+-..|+++.+.+|.
T Consensus       199 ------~~-~~~~~~~~~~~--pl---------------~R~~~pedvA~~v~fL~S~~-a~~itG~~i~vDGG~  248 (251)
T d1vl8a_         199 ------SD-PEKLDYMLKRI--PL---------------GRTGVPEDLKGVAVFLASEE-AKYVTGQIIFVDGGW  248 (251)
T ss_dssp             ------TC-HHHHHHHHHTC--TT---------------SSCBCGGGGHHHHHHHHSGG-GTTCCSCEEEESTTG
T ss_pred             ------CC-HHHHHHHHhcC--CC---------------CCCCCHHHHHHHHHHHhCch-hCCCcCcEEEeCcCe
Confidence                  00 01222332221  11               11456789999999888652 234677898887664

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.99  E-value=0.011  Score=43.50  Aligned_cols=110  Identities=12%  Similarity=0.048  Sum_probs=68.9

Q ss_pred             EEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCCC
Q 028478            8 NLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRGI   85 (208)
Q Consensus         8 ~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~~   85 (208)
                      ++|++||.......           .....|+.+|.+.+.+.+.++.++  -++.+..+-||.+-.+.....     .  
T Consensus       128 ~ii~isS~~~~~~~-----------~~~~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~-----~--  189 (242)
T d1cyda_         128 SIVNVSSMVAHVTF-----------PNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKV-----S--  189 (242)
T ss_dssp             EEEEECCGGGTSCC-----------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHH-----T--
T ss_pred             cccccchhhccccC-----------CccccccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhh-----c--
Confidence            78899987654321           124579999999999999887653  178999999998876421000     0  


Q ss_pred             CCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           86 PNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                       .. -..........  |+               .-+...+|+|+++..++... ..-..|+++.+.+|.
T Consensus       190 -~~-~~~~~~~~~~~--pl---------------~R~~~peeva~~v~fL~S~~-s~~itG~~i~vDGG~  239 (242)
T d1cyda_         190 -AD-PEFARKLKERH--PL---------------RKFAEVEDVVNSILFLLSDR-SASTSGGGILVDAGY  239 (242)
T ss_dssp             -CC-HHHHHHHHHHS--TT---------------SSCBCHHHHHHHHHHHHSGG-GTTCCSSEEEESTTG
T ss_pred             -CC-HHHHHHHHhcC--CC---------------CCCcCHHHHHHHHHHHhCch-hcCcCCceEEeCcch
Confidence             00 01222222211  11               12567899999999988652 334677888887664

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.79  E-value=0.019  Score=42.34  Aligned_cols=115  Identities=9%  Similarity=-0.074  Sum_probs=70.9

Q ss_pred             EEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCCC
Q 028478            8 NLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRGI   85 (208)
Q Consensus         8 ~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~~   85 (208)
                      ++|++||....-.           ......|+.+|.+.+.+.+.++.++  -++.+..+.||.|-.+..+...     ..
T Consensus       132 ~Ii~isS~~~~~~-----------~~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~-----~~  195 (250)
T d1ydea1         132 NVINISSLVGAIG-----------QAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELA-----AL  195 (250)
T ss_dssp             EEEEECCHHHHHC-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHH-----TT
T ss_pred             CCccccccccccc-----------ccCcchhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHh-----hc
Confidence            7999998765421           1124689999999999998887643  1799999999988653100000     00


Q ss_pred             CCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCc
Q 028478           86 PNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGT  157 (208)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~  157 (208)
                      ...-...+.+.....  |+               .-+...+|+|++++.++..  +.-..|+++.+-+|..+
T Consensus       196 ~~~~~~~~~~~~~~~--pl---------------~R~g~p~eva~~v~fL~Sd--a~~itG~~i~vDGG~~l  248 (250)
T d1ydea1         196 MPDPRASIREGMLAQ--PL---------------GRMGQPAEVGAAAVFLASE--ANFCTGIELLVTGGAEL  248 (250)
T ss_dssp             SSSHHHHHHHHHHTS--TT---------------SSCBCHHHHHHHHHHHHHH--CTTCCSCEEEESTTTTS
T ss_pred             CCCHHHHHHHHHhcC--CC---------------CCCCCHHHHHHHHHHHhCc--cCCCcCCeEEECCCccc
Confidence            000111222222221  11               1256789999999998753  33467799988777543

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=94.78  E-value=0.043  Score=40.32  Aligned_cols=122  Identities=9%  Similarity=-0.052  Sum_probs=68.9

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC-C-CccEEEEecccccCCCCCCCCCCCCCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD-S-EWKIILLRYFNPVGAHPSGKIGEDPRG   84 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~-~~~~~iiR~~~i~G~~~~~~~~~~~~~   84 (208)
                      .++|++||...+-.           ......|+.+|.+.+.+.+.++.+. + ++.+..+.||.+-.+.           
T Consensus       131 g~Iv~isS~~~~~~-----------~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~-----------  188 (255)
T d1gega_         131 GKIINACSQAGHVG-----------NPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPM-----------  188 (255)
T ss_dssp             EEEEEECCGGGTSC-----------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHH-----------
T ss_pred             cccccccchhhccc-----------CcccccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChH-----------
Confidence            36888888765421           1124679999999999988877543 1 7999999999886541           


Q ss_pred             CCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCc
Q 028478           85 IPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGT  157 (208)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~  157 (208)
                          +..+..........+.......+-  ......-+...+|+|++++.++.. ..+-..|+++.+.+|..+
T Consensus       189 ----~~~~~~~~~~~~~~~~~~~~~~~~--~~~pl~R~~~peevA~~v~fL~S~-~a~~itG~~i~vDGG~~~  254 (255)
T d1gega_         189 ----WAEIDRQVSEAAGKPLGYGTAEFA--KRITLGRLSEPEDVAACVSYLASP-DSDYMTGQSLLIDGGMVF  254 (255)
T ss_dssp             ----HHHHHHHHHHHHTCCTTHHHHHHH--TTCTTCSCBCHHHHHHHHHHHHSG-GGTTCCSCEEEESSSSSC
T ss_pred             ----HhhhhhhhHhhhcccchhHHHHHH--hcCCCCCCcCHHHHHHHHHHHhCc-hhCCccCcEEEecCCEEe
Confidence                000111100000000000000000  000011256789999999998865 233467789988777543

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=94.38  E-value=0.023  Score=41.90  Aligned_cols=121  Identities=9%  Similarity=-0.018  Sum_probs=70.0

Q ss_pred             CCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC-C-CccEEEEecccccCCCCCCCCCCCC
Q 028478            5 GCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD-S-EWKIILLRYFNPVGAHPSGKIGEDP   82 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~-~~~~~iiR~~~i~G~~~~~~~~~~~   82 (208)
                      +--++|++||...+-..           .....|+.+|.+.+.+.+.++.++ + ++.+..+-||.|-.+........ .
T Consensus       131 ~~g~Ii~i~S~~~~~~~-----------~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~-~  198 (257)
T d2rhca1         131 GTGRIVNIASTGGKQGV-----------VHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREH-Y  198 (257)
T ss_dssp             TEEEEEEECCGGGTSCC-----------TTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHH-H
T ss_pred             CCccccccccccccccc-----------ccchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhh-h
Confidence            33478888887654221           124679999999999999988764 2 68999999988865310000000 0


Q ss_pred             CCCCCChHH-HHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           83 RGIPNNLMP-FVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        83 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                      ......... ...+....-  |+               .-+...+|+|++++.++.. ...-..|+++.+.+|-
T Consensus       199 ~~~~~~~~~e~~~~~~~~~--Pl---------------gR~~~pedia~~v~fL~S~-~s~~itG~~i~vDGG~  254 (257)
T d2rhca1         199 SDIWEVSTEEAFDRITARV--PI---------------GRYVQPSEVAEMVAYLIGP-GAAAVTAQALNVCGGL  254 (257)
T ss_dssp             HHHTTCCHHHHHHHHHTTS--TT---------------SSCBCHHHHHHHHHHHTSG-GGTTCCSCEEEESTTC
T ss_pred             hhhcccChHHHHHHHHhcC--CC---------------CCCcCHHHHHHHHHHHhCc-hhcCCcCceEEECcCc
Confidence            000000001 222222211  11               1256789999999998864 2334677888887664

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.27  E-value=0.016  Score=43.96  Aligned_cols=95  Identities=8%  Similarity=-0.033  Sum_probs=60.1

Q ss_pred             CChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCCCCCChHH-HHHHHHhCCCCeeEEEcccc
Q 028478           35 MNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMP-FVTQVAVGRRPELTVFGTDY  111 (208)
Q Consensus        35 ~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  111 (208)
                      ...|+.+|.+.+.+.+.++.++  -++.+..+.||.|..+.....++        .... +.......    ++      
T Consensus       162 ~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~--------~~~~~~~~~~~~~----~p------  223 (297)
T d1yxma1         162 AVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYG--------SWGQSFFEGSFQK----IP------  223 (297)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSG--------GGGGGGGTTGGGG----ST------
T ss_pred             cccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhcc--------ccCHHHHHHHHhc----CC------
Confidence            4679999999999999887654  27999999999987753111100        0000 11111111    11      


Q ss_pred             CCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478          112 STKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus       112 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                             ..-+...+|+|.+++.++... ..-..|+++.+.+|.
T Consensus       224 -------lgR~g~pedvA~~v~fL~Sd~-s~~iTG~~i~VDGG~  259 (297)
T d1yxma1         224 -------AKRIGVPEEVSSVVCFLLSPA-ASFITGQSVDVDGGR  259 (297)
T ss_dssp             -------TSSCBCTHHHHHHHHHHHSGG-GTTCCSCEEEESTTG
T ss_pred             -------CCCCcCHHHHHHHHHHHhCch-hcCcCCcEEEeCcCh
Confidence                   012567899999999998652 234677999887765

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=94.23  E-value=0.02  Score=42.76  Aligned_cols=121  Identities=10%  Similarity=-0.053  Sum_probs=68.5

Q ss_pred             CCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCC
Q 028478            5 GCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDP   82 (208)
Q Consensus         5 ~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~   82 (208)
                      +-.+++++||......           ......|+.+|.+.+.+.+.++.++  -++.+..+.||.|-.+.....     
T Consensus       136 ~~g~ii~~ss~~~~~~-----------~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~-----  199 (274)
T d1xhla_         136 KGEIVNVSSIVAGPQA-----------HSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAM-----  199 (274)
T ss_dssp             TCEEEEECCGGGSSSC-----------CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHT-----
T ss_pred             ccccccchhhhhcccc-----------CCCCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhh-----
Confidence            3346777776543321           1124579999999999988776543  179999999999876421000     


Q ss_pred             CCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           83 RGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                       ....................+++             .-+...+|+|++++.++..+.+.-..|+.+.+-+|.
T Consensus       200 -~~~~~~~~~~~~~~~~~~~~iPl-------------gR~g~pediA~~v~fL~S~d~s~~itG~~i~vDGG~  258 (274)
T d1xhla_         200 -GLPETASDKLYSFIGSRKECIPV-------------GHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGS  258 (274)
T ss_dssp             -TCCHHHHHHHHHHHHHCTTTCTT-------------SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTG
T ss_pred             -cccchhhHHHHHHHHHHHcCCCC-------------CCCcCHHHHHHHHHHHcCCccccCccCcEEEeCcCH
Confidence             00000011111111111101111             125678999999999885322223677899887775

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=94.16  E-value=0.28  Score=35.51  Aligned_cols=92  Identities=12%  Similarity=0.026  Sum_probs=60.4

Q ss_pred             CChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCeeEEEccccC
Q 028478           35 MNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYS  112 (208)
Q Consensus        35 ~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  112 (208)
                      ...|+.+|...+.+.+.++.++  -++.+..+.||.+..+..          .+   ......... .. |+        
T Consensus       169 ~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~----------~~---~~~~~~~~~-~~-pl--------  225 (266)
T d1mxha_         169 FCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPA----------MP---QETQEEYRR-KV-PL--------  225 (266)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSS----------SC---HHHHHHHHT-TC-TT--------
T ss_pred             hhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEecccc----------CC---HHHHHHHHh-cC-CC--------
Confidence            5689999999999988876643  179999999998865420          00   112223322 21 11        


Q ss_pred             CCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478          113 TKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus       113 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                         +   |-+...+|+|.+++.++... ..-..|+++.+-+|..
T Consensus       226 ---~---r~~~~peeva~~v~fL~s~~-s~~itG~~i~vDGG~~  262 (266)
T d1mxha_         226 ---G---QSEASAAQIADAIAFLVSKD-AGYITGTTLKVDGGLI  262 (266)
T ss_dssp             ---T---SCCBCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTGG
T ss_pred             ---C---CCCCCHHHHHHHHHHHhCch-hCCccCCeEEECccHh
Confidence               1   22457899999999999762 2235778888877653

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=94.09  E-value=0.047  Score=40.63  Aligned_cols=118  Identities=10%  Similarity=-0.031  Sum_probs=67.7

Q ss_pred             EEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC-CCccEEEEecccccCCCCCCCCCCCCCCCC
Q 028478            8 NLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD-SEWKIILLRYFNPVGAHPSGKIGEDPRGIP   86 (208)
Q Consensus         8 ~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~iiR~~~i~G~~~~~~~~~~~~~~~   86 (208)
                      ++|++||...+-.           ......|+.+|.+.+.+.+.++.+. +.+.+..+.||.|-.+.........  . .
T Consensus       136 ~iI~i~S~~~~~~-----------~~~~~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~--~-~  201 (276)
T d1bdba_         136 NVIFTISNAGFYP-----------NGGGPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGM--G-S  201 (276)
T ss_dssp             EEEEECCGGGTST-----------TSSCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC------
T ss_pred             CceeeeechhccC-----------CCCCchHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhh--h-h
Confidence            6788777544321           1124579999999999999988765 5689999999988664211000000  0 0


Q ss_pred             CChH-HHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478           87 NNLM-PFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus        87 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                      .... ........... |+               .=+...+|+|.+++.++..+.+.-..|+.+++-+|.
T Consensus       202 ~~~~~~~~~~~~~~~~-Pl---------------gR~g~peeva~~v~fL~S~~~a~~itG~~i~VDGG~  255 (276)
T d1bdba_         202 KAISTVPLADMLKSVL-PI---------------GRMPEVEEYTGAYVFFATRGDAAPATGALLNYDGGL  255 (276)
T ss_dssp             ------CHHHHHTTTC-TT---------------SSCCCGGGGSHHHHHHHCHHHHTTCSSCEEEESSSG
T ss_pred             hccCcHHHHHHHHhcC-CC---------------CCCcCHHHHHHHHHHHcCCcccCCeeCcEEEECcCh
Confidence            0000 11112222221 11               114567999999988875322233677999887664

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=94.09  E-value=0.053  Score=39.91  Aligned_cols=104  Identities=13%  Similarity=0.025  Sum_probs=60.8

Q ss_pred             CChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCC-CCCCCCCCChHHHHHHHHhCCCCeeEEEcccc
Q 028478           35 MNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIG-EDPRGIPNNLMPFVTQVAVGRRPELTVFGTDY  111 (208)
Q Consensus        35 ~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  111 (208)
                      ...|+.+|.+.+.+.+.++.++  -++.+..+.||.+-.+..+.... .............+........ |+       
T Consensus       152 ~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-pl-------  223 (259)
T d1ja9a_         152 HALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMN-PL-------  223 (259)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTS-TT-------
T ss_pred             chhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCC-CC-------
Confidence            3579999999999988877653  27999999999986431000000 0000000111122223222221 11       


Q ss_pred             CCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478          112 STKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus       112 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                              +-+...+|+|++++.++... .+...|+.+.+-+|.
T Consensus       224 --------~R~g~p~eVa~~v~fL~S~~-a~~itG~~i~vDGG~  258 (259)
T d1ja9a_         224 --------KRIGYPADIGRAVSALCQEE-SEWINGQVIKLTGGG  258 (259)
T ss_dssp             --------SSCBCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTC
T ss_pred             --------CCCcCHHHHHHHHHHHhCch-hcCCcCceEEeCCCC
Confidence                    12578899999999998763 234677888877654

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=94.02  E-value=0.29  Score=35.88  Aligned_cols=104  Identities=16%  Similarity=-0.048  Sum_probs=59.5

Q ss_pred             CChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCCCCCChHHHH-HHHHhCCCCeeEEEcccc
Q 028478           35 MNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFV-TQVAVGRRPELTVFGTDY  111 (208)
Q Consensus        35 ~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  111 (208)
                      ...|+.+|.+.+.+.+.++.++  -++.+..|.||.+-.+..................... ........ |+       
T Consensus       164 ~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Pl-------  235 (272)
T d1g0oa_         164 HAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWS-PL-------  235 (272)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSC-TT-------
T ss_pred             hhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccC-CC-------
Confidence            4579999999999998776643  1799999999998653100000000000000001111 11111110 11       


Q ss_pred             CCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478          112 STKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus       112 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                              .-+...+|+|.+++.++... +.-..|+++.+.+|.
T Consensus       236 --------gR~~~peevA~~v~fL~s~~-s~~itG~~i~vDGG~  270 (272)
T d1g0oa_         236 --------RRVGLPIDIARVVCFLASND-GGWVTGKVIGIDGGA  270 (272)
T ss_dssp             --------CSCBCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTC
T ss_pred             --------CCCcCHHHHHHHHHHHhCch-hcCccCceEeECCCC
Confidence                    12678899999999998752 233577888887765

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=93.65  E-value=0.29  Score=35.85  Aligned_cols=92  Identities=11%  Similarity=-0.006  Sum_probs=59.5

Q ss_pred             CChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCCCCCChHH-HHHHHHhCCCCeeEEEcccc
Q 028478           35 MNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMP-FVTQVAVGRRPELTVFGTDY  111 (208)
Q Consensus        35 ~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  111 (208)
                      ...|+.+|...+.+.+.++.++  -++.+..+-||.+-..              ..+.+ .........    ++.+   
T Consensus       187 ~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~--------------~~~~~~~~~~~~~~~----pl~~---  245 (284)
T d1e7wa_         187 YTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLV--------------DDMPPAVWEGHRSKV----PLYQ---  245 (284)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCG--------------GGSCHHHHHHHHTTC----TTTT---
T ss_pred             eeeeccccccchhhhHHHHHHhCCcccccccccccccccc--------------ccCCHHHHHHHHhcC----CCCC---
Confidence            4689999999999998887643  1789999999853221              01112 333333221    1111   


Q ss_pred             CCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCc
Q 028478          112 STKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGT  157 (208)
Q Consensus       112 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~  157 (208)
                               -+...+|+|+++..++... ..-..|+.+.+-+|..+
T Consensus       246 ---------R~~~peeiA~~v~fL~S~~-s~~itG~~i~VDGG~sl  281 (284)
T d1e7wa_         246 ---------RDSSAAEVSDVVIFLCSSK-AKYITGTCVKVDGGYSL  281 (284)
T ss_dssp             ---------SCBCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTGGG
T ss_pred             ---------CCCCHHHHHHHHHHHhCch-hcCccCCeEEECcChhc
Confidence                     1467899999999998652 23467789988877644

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=93.61  E-value=0.13  Score=38.22  Aligned_cols=95  Identities=12%  Similarity=0.039  Sum_probs=59.8

Q ss_pred             CChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCeeEEEccccC
Q 028478           35 MNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYS  112 (208)
Q Consensus        35 ~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  112 (208)
                      ...|+.+|.+.+.+.+.++.++  -++.+..+.||.|-.+.........        -.........-  |+        
T Consensus       173 ~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~--------~~~~~~~~~~~--pl--------  234 (294)
T d1w6ua_         173 VVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPT--------GTFEKEMIGRI--PC--------  234 (294)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTT--------SHHHHHHHTTC--TT--------
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCc--------HHHHHHHhhcC--CC--------
Confidence            3579999999999999887543  1799999999999876322111000        01223333221  11        


Q ss_pred             CCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478          113 TKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus       113 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                         +    -+...+|+|+++..++... ..-..|+++.+.+|.
T Consensus       235 ---~----R~~~pediA~~v~fL~sd~-s~~itG~~i~vDGG~  269 (294)
T d1w6ua_         235 ---G----RLGTVEELANLAAFLCSDY-ASWINGAVIKFDGGE  269 (294)
T ss_dssp             ---S----SCBCHHHHHHHHHHHTSGG-GTTCCSCEEEESTTH
T ss_pred             ---C----CCCCHHHHHHHHHHHhCch-hcCCCCcEEEECCCh
Confidence               1    2557899999999998652 233677899887764

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=93.32  E-value=0.11  Score=37.77  Aligned_cols=92  Identities=8%  Similarity=-0.027  Sum_probs=52.2

Q ss_pred             hHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCeeEEEccccCCC
Q 028478           37 PYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTK  114 (208)
Q Consensus        37 ~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  114 (208)
                      .|+.+|.+.+.+.+.++.++  -++.+..+.||.+-.+..+....  +..       ......+.. .|+          
T Consensus       154 ~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~--~~~-------~~~~~~~~~-~Pl----------  213 (257)
T d1fjha_         154 AYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQ--DPR-------YGESIAKFV-PPM----------  213 (257)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC------------------------------CC-CST----------
T ss_pred             HHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcC--CHH-------HHHHHHhcC-CCC----------
Confidence            59999999999998887543  27999999999987653111000  000       111111110 011          


Q ss_pred             CCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCC
Q 028478          115 DGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTG  154 (208)
Q Consensus       115 ~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~  154 (208)
                           .=+...+|+|.++..++... ..-..|+++.+-+|
T Consensus       214 -----gR~g~p~eva~~v~fL~S~~-s~~itG~~i~vDGG  247 (257)
T d1fjha_         214 -----GRRAEPSEMASVIAFLMSPA-ASYVHGAQIVIDGG  247 (257)
T ss_dssp             -----TSCCCTHHHHHHHHHHTSGG-GTTCCSCEEEESTT
T ss_pred             -----CCCcCHHHHHHHHHHHhCch-hCCccCceEEeCCC
Confidence                 11567899999999988652 22367788888665

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=93.16  E-value=0.039  Score=41.03  Aligned_cols=104  Identities=8%  Similarity=-0.050  Sum_probs=60.8

Q ss_pred             CChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCeeEEEccccC
Q 028478           35 MNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYS  112 (208)
Q Consensus        35 ~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  112 (208)
                      ...|+.+|.+.+.+.+.++.++  -++.+..+-||.|-.+.....      ....................+++      
T Consensus       158 ~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~------~~~~~~~~~~~~~~~~~~~~~Pl------  225 (272)
T d1xkqa_         158 FLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAM------GMPDQASQKFYNFMASHKECIPI------  225 (272)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHT------TCCHHHHHHHHHHHHHCTTTCTT------
T ss_pred             cchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhcc------CCchHHHHHHHHHHHHHhcCCCC------
Confidence            4579999999999998887553  179999999998866421000      00000111111111111001111      


Q ss_pred             CCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCCc
Q 028478          113 TKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKGT  157 (208)
Q Consensus       113 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~~  157 (208)
                             .-+...+|+|++++.++....+.-..|+++.+.+|..+
T Consensus       226 -------gR~g~pediA~~v~fL~S~~as~~iTG~~i~vDGG~~l  263 (272)
T d1xkqa_         226 -------GAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTSL  263 (272)
T ss_dssp             -------SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             -------CCCcCHHHHHHHHHHHhCcchhCCccCeEEEeCcCHHH
Confidence                   12567899999999988542222356789988777543

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=92.92  E-value=0.11  Score=38.16  Aligned_cols=55  Identities=15%  Similarity=0.024  Sum_probs=41.6

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGA   72 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~   72 (208)
                      -++|++||...+-..           .....|+.+|.+.+.+.+.++.++  -++.+..+-||.|-.+
T Consensus       135 G~II~isS~~~~~~~-----------~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~  191 (260)
T d1zema1         135 GRIVNTASMAGVKGP-----------PNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPG  191 (260)
T ss_dssp             EEEEEECCHHHHSCC-----------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSS
T ss_pred             CCCCeeechhhccCC-----------cchHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCc
Confidence            389999997655321           123589999999999998887653  1789999999988764

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=92.11  E-value=0.33  Score=35.40  Aligned_cols=94  Identities=16%  Similarity=0.135  Sum_probs=60.3

Q ss_pred             CChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCeeEEEccccC
Q 028478           35 MNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYS  112 (208)
Q Consensus        35 ~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  112 (208)
                      ...|+.+|...+.+.+..+.++  -++.+..+.||.+..+......        + --..........  ++        
T Consensus       154 ~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~--------~-~~~~~~~~~~~~--p~--------  214 (274)
T d2pd4a1         154 YNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIA--------D-FRMILKWNEINA--PL--------  214 (274)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGST--------T-HHHHHHHHHHHS--TT--------
T ss_pred             chhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccC--------c-hHHHHHHHhhhh--hc--------
Confidence            4579999999999988776543  1789999999988875321100        0 011111111111  11        


Q ss_pred             CCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478          113 TKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus       113 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                             .-+...+|+|.++..++... .....|+++.+-+|.
T Consensus       215 -------~r~~~pedIA~~v~fL~S~~-s~~itG~~i~vDGG~  249 (274)
T d2pd4a1         215 -------RKNVSLEEVGNAGMYLLSSL-SSGVSGEVHFVDAGY  249 (274)
T ss_dssp             -------SSCCCHHHHHHHHHHHHSGG-GTTCCSCEEEESTTG
T ss_pred             -------cCCcCHHHHHHHHHHHhChh-hCCCcCceEEECCCh
Confidence                   12568899999999998752 334677899887765

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.00  E-value=0.5  Score=34.52  Aligned_cols=84  Identities=12%  Similarity=-0.043  Sum_probs=55.9

Q ss_pred             EEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC----CCccEEEEecccccCCCCCCCCCCCCC
Q 028478            8 NLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD----SEWKIILLRYFNPVGAHPSGKIGEDPR   83 (208)
Q Consensus         8 ~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~iiR~~~i~G~~~~~~~~~~~~   83 (208)
                      ++|++||...+-.           ......|+.||.+.+.+.+.++.++    .++.+..+.||.|-.+           
T Consensus       144 ~ii~isS~~~~~~-----------~p~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~-----------  201 (269)
T d1xu9a_         144 SIVVVSSLAGKVA-----------YPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTE-----------  201 (269)
T ss_dssp             EEEEEEEGGGTSC-----------CTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCH-----------
T ss_pred             cceEeccchhcCC-----------CCCchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCc-----------
Confidence            7888888664421           1225689999999999888876542    1578888998877553           


Q ss_pred             CCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhh
Q 028478           84 GIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHK  138 (208)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  138 (208)
                              +..+...+                 .........+++|+.++..+..
T Consensus       202 --------~~~~~~~~-----------------~~~~~~~~~e~~a~~i~~~~~~  231 (269)
T d1xu9a_         202 --------TAMKAVSG-----------------IVHMQAAPKEECALEIIKGGAL  231 (269)
T ss_dssp             --------HHHHHSCG-----------------GGGGGCBCHHHHHHHHHHHHHT
T ss_pred             --------HHHHhccC-----------------CccccCCCHHHHHHHHHHHhhc
Confidence                    33333222                 1122345678999999887766

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.71  E-value=0.15  Score=37.34  Aligned_cols=57  Identities=11%  Similarity=0.064  Sum_probs=39.7

Q ss_pred             CEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC----CCccEEEEecccccCC
Q 028478            7 KNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD----SEWKIILLRYFNPVGA   72 (208)
Q Consensus         7 k~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~iiR~~~i~G~   72 (208)
                      .++|++||..-+..         .|......|+.+|...+.+.+.++.+.    .++.+..+-||.+-.+
T Consensus       143 g~Ii~isS~~~~~~---------~p~~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~  203 (257)
T d1xg5a_         143 GHIININSMSGHRV---------LPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQ  203 (257)
T ss_dssp             CEEEEECCGGGTSC---------CSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSS
T ss_pred             CceEEEechHhcCC---------CCCcccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCCh
Confidence            38999999765421         111123469999999999998776431    2789999998876553

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=91.68  E-value=0.54  Score=34.01  Aligned_cols=106  Identities=14%  Similarity=-0.007  Sum_probs=61.1

Q ss_pred             CChHHHhHHHHHHHHHHHhhcC-C-CccEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCeeEEEccccC
Q 028478           35 MNPYGRTKLFIEEICRDVHRSD-S-EWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMPFVTQVAVGRRPELTVFGTDYS  112 (208)
Q Consensus        35 ~~~Y~~sK~~~E~~~~~~~~~~-~-~~~~~iiR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  112 (208)
                      ...|+.+|.+.+.+.+.++.++ + ++.+..+.||.+-.+......+.............+......+. |+        
T Consensus       157 ~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-pl--------  227 (268)
T d2h7ma1         157 YNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRA-PI--------  227 (268)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHC-TT--------
T ss_pred             cchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcC-CC--------
Confidence            4589999999999999887654 2 79999999998865411000000000000001111111111110 11        


Q ss_pred             CCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478          113 TKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus       113 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                            .|-+...+|+|+++..++.. ..+...|+++.+-+|..
T Consensus       228 ------~rr~~~p~dva~~v~fL~Sd-~a~~iTG~~i~vDGG~~  264 (268)
T d2h7ma1         228 ------GWNMKDATPVAKTVCALLSD-WLPATTGDIIYADGGAH  264 (268)
T ss_dssp             ------CCCTTCCHHHHHHHHHHHSS-SCTTCCSEEEEESTTGG
T ss_pred             ------CCCCCCHHHHHHHHHHHhCc-hhcCccCCEEEECcCcc
Confidence                  13356789999999999854 33346778888877653

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=91.65  E-value=0.92  Score=34.09  Aligned_cols=54  Identities=7%  Similarity=-0.143  Sum_probs=37.8

Q ss_pred             EEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC-C--CccEEEEecccccC
Q 028478            8 NLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD-S--EWKIILLRYFNPVG   71 (208)
Q Consensus         8 ~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~--~~~~~iiR~~~i~G   71 (208)
                      ++|.+||........          .....|+.+|.+.+.+.+.++.+. |  ++.+..+.||.|--
T Consensus       166 sIv~iss~~~~~~~p----------~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T  222 (329)
T d1uh5a_         166 SIISLTYHASQKVVP----------GYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKS  222 (329)
T ss_dssp             EEEEEECGGGTSCCT----------TCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCC
T ss_pred             ccccceeehhccccc----------ccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccc
Confidence            677787755432110          124569999999999998876543 2  89999999997743

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=91.58  E-value=0.16  Score=36.84  Aligned_cols=92  Identities=14%  Similarity=0.073  Sum_probs=62.0

Q ss_pred             CChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCCCCCChHH-HHHHHHhCCCCeeEEEcccc
Q 028478           35 MNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMP-FVTQVAVGRRPELTVFGTDY  111 (208)
Q Consensus        35 ~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  111 (208)
                      ...|+.+|.+.|.+.+.++.++  -++.+..+.||.+-.+...            .+.+ ......+..  |+       
T Consensus       145 ~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~------------~~~~~~~~~~~~~~--p~-------  203 (241)
T d2a4ka1         145 LAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTA------------GLPPWAWEQEVGAS--PL-------  203 (241)
T ss_dssp             HHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGT------------TSCHHHHHHHHHTS--TT-------
T ss_pred             ccccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHH------------hhhHhHHHHHHhCC--CC-------
Confidence            3469999999999999987765  1699999999988654211            1122 333333322  22       


Q ss_pred             CCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCCC
Q 028478          112 STKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGKG  156 (208)
Q Consensus       112 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~~  156 (208)
                              .-+...+|+|+++..++.. ..+-..|+++.+.+|..
T Consensus       204 --------~r~~~p~dva~~v~fL~S~-~s~~itG~~i~vDGG~s  239 (241)
T d2a4ka1         204 --------GRAGRPEEVAQAALFLLSE-ESAYITGQALYVDGGRS  239 (241)
T ss_dssp             --------CSCBCHHHHHHHHHHHHSG-GGTTCCSCEEEESTTTT
T ss_pred             --------CCCcCHHHHHHHHHHHhcc-hhCCCcCceEEeCCCcc
Confidence                    1256789999999999965 22346778888877754

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.50  E-value=0.078  Score=39.60  Aligned_cols=58  Identities=16%  Similarity=0.110  Sum_probs=42.2

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGA   72 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~   72 (208)
                      .+--++|++||+...-.           ......|+.+|.+.+.+.+.++.+.  -++.+..+.||.|-.+
T Consensus       132 ~~~G~Iv~isS~~g~~~-----------~~~~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~  191 (285)
T d1jtva_         132 RGSGRVLVTGSVGGLMG-----------LPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTA  191 (285)
T ss_dssp             HTCEEEEEEEEGGGTSC-----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-
T ss_pred             cCCCceEEEechhhcCC-----------CCCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCCh
Confidence            34448999999765421           1124579999999999988876643  1799999999988764

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=87.18  E-value=3.6  Score=29.77  Aligned_cols=92  Identities=7%  Similarity=-0.004  Sum_probs=59.2

Q ss_pred             CChHHHhHHHHHHHHHHHhh----cCCCccEEEEecccccCCCCCCCCCCCCCCCCCChHH-HHHHHHhCCCCeeEEEcc
Q 028478           35 MNPYGRTKLFIEEICRDVHR----SDSEWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMP-FVTQVAVGRRPELTVFGT  109 (208)
Q Consensus        35 ~~~Y~~sK~~~E~~~~~~~~----~~~~~~~~iiR~~~i~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  109 (208)
                      ...|+.+|...+.+.+.+..    .+ ++.+..+.||.+..+....          ..... +.......-  |+   + 
T Consensus       189 ~~~y~~aKaa~~~l~~~~a~e~~~~~-gIrvN~I~PG~i~T~~~~~----------~~~~~~~~~~~~~~~--Pl---g-  251 (297)
T d1d7oa_         189 GGGMSSAKAALESDTRVLAFEAGRKQ-NIRVNTISAGPLGSRAAKA----------IGFIDTMIEYSYNNA--PI---Q-  251 (297)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECCCBCCCSSC----------CSHHHHHHHHHHHHS--SS---C-
T ss_pred             ccceecccccccccccccchhccccc-eEEecccccccccchhhhh----------ccCCHHHHHHHHhCC--CC---C-
Confidence            45799999988887766543    34 7999999999998763210          11222 333333221  22   1 


Q ss_pred             ccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478          110 DYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus       110 ~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                                 -+...+|+|.+++.++... ..-..|+++.+-+|.
T Consensus       252 -----------R~~~peevA~~v~fL~S~~-a~~itGq~i~vDGG~  285 (297)
T d1d7oa_         252 -----------KTLTADEVGNAAAFLVSPL-ASAITGATIYVDNGL  285 (297)
T ss_dssp             -----------CCBCHHHHHHHHHHHTSGG-GTTCCSCEEEESTTG
T ss_pred             -----------CCCCHHHHHHHHHHHhCch-hcCCcCceEEECcCH
Confidence                       2567899999999998652 233677888887664

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=86.99  E-value=0.34  Score=35.35  Aligned_cols=91  Identities=10%  Similarity=0.058  Sum_probs=59.8

Q ss_pred             CChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCCCCCCCCChHH-HHHHHHhCCCCeeEEEcccc
Q 028478           35 MNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGEDPRGIPNNLMP-FVTQVAVGRRPELTVFGTDY  111 (208)
Q Consensus        35 ~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  111 (208)
                      ...|+.+|.+.+.+.+.++.++  -++.+..+.||.|-.+...            .+.+ ........-  |+       
T Consensus       164 ~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~------------~~~~~~~~~~~~~~--pl-------  222 (260)
T d1h5qa_         164 QVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTA------------HMDKKIRDHQASNI--PL-------  222 (260)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGG------------GSCHHHHHHHHHTC--TT-------
T ss_pred             ccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchh------------ccCHHHHHHHHhcC--CC-------
Confidence            4579999999999998876543  1799999999988664211            1112 333333221  11       


Q ss_pred             CCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCCC
Q 028478          112 STKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTGK  155 (208)
Q Consensus       112 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~~  155 (208)
                          +    -+...+|+|++++.++... ..-..|+++.+-+|.
T Consensus       223 ----~----R~g~pedvA~~v~fL~S~~-s~~itG~~i~VDGG~  257 (260)
T d1h5qa_         223 ----N----RFAQPEEMTGQAILLLSDH-ATYMTGGEYFIDGGQ  257 (260)
T ss_dssp             ----S----SCBCGGGGHHHHHHHHSGG-GTTCCSCEEEECTTG
T ss_pred             ----C----CCcCHHHHHHHHHHHhcch-hCCCcCceEEECCCe
Confidence                1    1567899999999988652 233667888887765

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.75  E-value=0.1  Score=38.06  Aligned_cols=58  Identities=12%  Similarity=-0.058  Sum_probs=40.9

Q ss_pred             CCCCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC-----CCccEEEEecccccCC
Q 028478            4 HGCKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD-----SEWKIILLRYFNPVGA   72 (208)
Q Consensus         4 ~~vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~~iiR~~~i~G~   72 (208)
                      .+--++|++||...+-.           ......|+.+|.+.+.+.+.++.+.     .++.+..+.||.|-.+
T Consensus       133 ~~~G~Iv~isS~~~~~~-----------~~~~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~  195 (244)
T d1yb1a_         133 NNHGHIVTVASAAGHVS-----------VPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTG  195 (244)
T ss_dssp             TTCEEEEEECCCC-CCC-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHC
T ss_pred             cCCceEEEeecchhcCC-----------CCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCCh
Confidence            34458999999765421           1124579999999999998887541     2689999999877553

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=83.94  E-value=0.31  Score=36.55  Aligned_cols=117  Identities=10%  Similarity=0.056  Sum_probs=73.8

Q ss_pred             CCCEEEEecccccc-CCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCCCCCCCCCCC
Q 028478            5 GCKNLVFSSSATVY-GWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGAHPSGKIGED   81 (208)
Q Consensus         5 ~vk~~i~~SS~~vy-g~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~~~~~~~~~~   81 (208)
                      +--+||++||.... +.            .....|+.+|...+.+.+.++.+.  -++.+..+-|+.+-...        
T Consensus       140 ~~G~IV~isS~~~~~~~------------~~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~--------  199 (302)
T d1gz6a_         140 NYGRIIMTASASGIYGN------------FGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMT--------  199 (302)
T ss_dssp             TCEEEEEECCHHHHHCC------------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTT--------
T ss_pred             CCcEEEEeCChhhcCCC------------CCcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcch--------
Confidence            33489999997654 32            124689999999999998887653  27899999998653321        


Q ss_pred             CCCCCCChHHHHHHHHhCCCCeeEEEccccCCCCCcceeeeeeHHHHHHHHHHHhhhcCCCCCCCceEEecCC-------
Q 028478           82 PRGIPNNLMPFVTQVAVGRRPELTVFGTDYSTKDGTGVRDYIHVIDLADGHIAALHKLDDPKIGCEVYNLGTG-------  154 (208)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ni~~~-------  154 (208)
                      ..     .+                         .+....++..+|+|.+++.++.. .. ...|+++.+.+|       
T Consensus       200 ~~-----~~-------------------------~~~~~~~~~PedvA~~v~fL~S~-~a-~itG~~i~vdGG~~~~~~~  247 (302)
T d1gz6a_         200 ET-----VM-------------------------PEDLVEALKPEYVAPLVLWLCHE-SC-EENGGLFEVGAGWIGKLRW  247 (302)
T ss_dssp             GG-----GS-------------------------CHHHHHHSCGGGTHHHHHHHTST-TC-CCCSCEEEEETTEEEEEEE
T ss_pred             hh-----cC-------------------------cHhhHhcCCHHHHHHHHHHHcCC-Cc-CCCCcEEEeCCCceeEEEE
Confidence            00     00                         01111234458999999988753 22 345566655332       


Q ss_pred             ------------CCcCHHHHHHHHHHHhCCC
Q 028478          155 ------------KGTSVLEMVAAFEKASGKV  173 (208)
Q Consensus       155 ------------~~~s~~e~~~~i~~~~g~~  173 (208)
                                  .+.+..++++.+.+.....
T Consensus       248 ~~~~g~~~~~~~~~~t~e~i~~~~~~i~d~~  278 (302)
T d1gz6a_         248 ERTLGAIVRKRNQPMTPEAVRDNWVKICDFS  278 (302)
T ss_dssp             EECCCEECCBTTBCCCHHHHHHTHHHHTCCT
T ss_pred             eecCcccccCCCCCCCHHHHHHHHHHHhCcc
Confidence                        3467788888877766543

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=81.97  E-value=1.6  Score=31.14  Aligned_cols=59  Identities=10%  Similarity=-0.102  Sum_probs=40.0

Q ss_pred             CCEEEEeccccccCCCCCCCCCCCCCCCCCChHHHhHHHHHHHHHHHhhcC--CCccEEEEecccccCC
Q 028478            6 CKNLVFSSSATVYGWPKVVPCTEEFPLEAMNPYGRTKLFIEEICRDVHRSD--SEWKIILLRYFNPVGA   72 (208)
Q Consensus         6 vk~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~iiR~~~i~G~   72 (208)
                      -.++|.+||..-.-  .      ..+......|+.||.+...+.+.++.++  .++.+..+.||.|-.+
T Consensus       146 ~g~ii~i~S~~g~~--~------~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~  206 (248)
T d1snya_         146 RAAIINMSSILGSI--Q------GNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTD  206 (248)
T ss_dssp             TCEEEEECCGGGCS--T------TCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCST
T ss_pred             cccccccccccccc--C------CCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCC
Confidence            44788888854221  1      0112234589999999999888776543  2799999999887654