Citrus Sinensis ID: 028482

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------21
Protein Sequence
MERSQNVQVIGKRIWSVVRVVFFMLRKGLCKRKLLVDLNMMLKRGKIAGGKALNNLIHHHHHHHYHHHRGHESSFHMAAQREYEFSCSNTPNYTFPYFHNANSNKRSKNNFLFGCAHAPATLDDNDAATVNAVKVVLEMLNNDKLVEASPALPGFGRSPFVRPLRITDSPFPLKDTDDDSGYVDKAAEEFIQKFYKELKNQKRSMADE
Secondary Structure (PSIPRED)
cccccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHcHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHccHHHHHHHHHHcccccccccccccccccccccccccEEEEEccccccccccccccccccccccccccccccccccHccHHHHHHHHHHHHHHHHcccccccccccccccccccccccEEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mersqnvqVIGKRIWSVVRVVFFMLRKGLCKRKLLVDLNMMLKrgkiaggkalnnlihhhhhhhyhhhrghessfhmAAQREyefscsntpnytfpyfhnansnkrsknnflfgcahapatlddndaaTVNAVKVVLEMLNNdklveaspalpgfgrspfvrplritdspfplkdtdddsgyvDKAAEEFIQKFYKELKNqkrsmade
Flexible Loop (DISEMBL)
mersqnvqvigkriwsvVRVVFFMLRKGLCKRKLLVDLNMMLKRGKIAGGKALNNLIHHHHHHHYHHHRGHESSFHMAAQREYEFSCSNTPNYTFPYFHNANSNKRSKNNFLFGCAHAPATLDDNDAATVNAVKVVLEMLNNDKLveaspalpgfgrspfvrplritdspfplkdtdddSGYVDKAAEEFIQKFYKElknqkrsmade
Low Complexity Region (SEG)
MERSQNVQVIGKRIWSVVRVVFFMLRKGLCKRKLLVDLNMMLKRGKIAGGKALNNLIhhhhhhhyhhhRGHESSFHMAAQREYEFSCSNTPNYTFPYFHNANSNKRSKNNFLFGCAHAPATLDDNDAATVNAVKVVLEMLNNDKLVEASPALPGFGRSPFVRPLRITDSPFPLKDTDDDSGYVDKAAEEFIQKFYKELKNQKRSMADE
Disordered region (IsUnstruct)
******VQVIGKRIWSVVRVVFFMLRKGLCKRKLLVDLNMMLKRGKIAG*********************************YEFSCSNTPNYTFPYFHNANSN*RSKNNFLFGCAHAPATLDDNDAATVNAVKVVLEMLNNDKLVEASPALPGFGRSPFVRPLRI*********************EEFIQKFY*************
Disordered Region (DISOPRED)
************RIWSVVRVVFFMLRKGLCKRKLLVDLNMMLKRGKIAG*KA********************************FSCSNTPNY*********************CAHAPATLDDNDAATVNAVKVVLEMLNNDKLVEASPAL*************ITDSPFPLKDTDDDSGYVDKAAEEFIQKFYKELKNQK******
Disordered Region (DISEMBL)
********VIGKRIWSVVRVVFFMLRKGLCKRKLLVDLNMMLKRGKIAGGKALNNLIHHH***************HMAAQREYEFSCSNTPNYTFPYFHNANSNKRSKNNFLFGCAHAPATLDDNDAATVNAVKVVLEMLNNDKLVEASPALPGFGRSPFVRPLRITDSPFPLKDTDDDSGYVDKAAEEFIQKFYKELK*********
Disordered Region (DISPRO)
*****NVQVIGKRIWSVVRVVFFMLRKGLCKRKLLVDLNMMLKRGKIAGGKALNNLIHHH*****HH**GHESSFHMAAQREYEFSCSNTPNYTFPYFHNANSNKRSKNNFLFGCAHAPATLDDNDAATVNAVKVVLEMLNNDKLVEASPALPGFGRSPFVRPLRITDSPFPLKDTDDDSGYVDKAAEEFIQKFYKELKNQKRS****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MERSQNVQVIGKRIWSVVRVVFFMLRKGLCKRKLLVDLNMMLKRGKIAGGKALNNLIHHHHHHHYHHHRGHESSFHMAAQREYEFSCSNTPNYTFPYFHNANSNKRSKNNFLFGCAHAPATLDDNDAATVNAVKVVLEMLNNDKLVEASPALPGFGRSPFVRPLRITDSPFPLKDTDDDSGYVDKAAEEFIQKFYKELKNQKRSMADE
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	208
224148243	205	predicted protein [Populus trichocarpa]	0.913	0.926	0.612	6e-57
357454807	195	hypothetical protein MTR_2g101120 [Medic	0.913	0.974	0.578	1e-55
147768061	208	hypothetical protein VITISV_030073 [Viti	0.908	0.908	0.606	3e-55
225442493	208	PREDICTED: uncharacterized protein LOC10	0.908	0.908	0.606	5e-55
356550506	191	PREDICTED: uncharacterized protein LOC10	0.875	0.952	0.592	2e-54
356556470	203	PREDICTED: uncharacterized protein LOC10	0.923	0.945	0.562	2e-53
357513443	190	hypothetical protein MTR_8g014030 [Medic	0.879	0.963	0.582	1e-52
356522242	197	PREDICTED: uncharacterized protein LOC10	0.899	0.949	0.588	3e-50
356528918	191	PREDICTED: uncharacterized protein LOC10	0.879	0.958	0.59	1e-49
255549850	234	conserved hypothetical protein [Ricinus	0.956	0.850	0.599	5e-49

>gi|224148243|ref|XP_002336619.1| predicted protein [Populus trichocarpa] gi|222836357|gb|EEE74764.1| predicted protein [Populus trichocarpa]

 Score =  226 bits (575), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 128/209 (61%), Positives = 151/209 (72%), Gaps = 19/209 (9%)

Query: 5   QNVQVIGKRIWSVVRVVFFMLRKGLCKRKLLVDLNMMLKRGKIAGGKALNNLIHHHHHHH 64
           QN+  I KR WS+VRV+FFMLRKGL KRKLLVDLNMMLKRG     KA+ NL+ HHHHH+
Sbjct: 3   QNLPAIAKRAWSIVRVIFFMLRKGLSKRKLLVDLNMMLKRGNKIASKAIGNLMFHHHHHN 62

Query: 65  YHHHRGHESSFHMAAQREYEFSCSNTPNYTFPYFHNANSNKR------SKNNFLFGCA-H 117
            H +   +S        EYEFSCSNTP Y+ P+  N   NKR        NNF F CA +
Sbjct: 63  DHRNVSFKS-----PPCEYEFSCSNTPTYSLPFHIN---NKRRHHHHHHHNNF-FACAFN 113

Query: 118 APATLDDNDAATVNAVKVVLEMLNNDKL---VEASPALPGFGRSPFVRPLRITDSPFPLK 174
           AP T DD+D  T+NAVK+ LE+LNN++L   VEASP LPGFGRSP VR LRITDSPFPL+
Sbjct: 114 APPTHDDHDMVTMNAVKLALELLNNNELPVPVEASPMLPGFGRSPMVRQLRITDSPFPLR 173

Query: 175 DTDDDSGYVDKAAEEFIQKFYKELKNQKR 203
           D DDD+G V+K A+EFI+KFYKEL+ QKR
Sbjct: 174 DVDDDNGLVNKKADEFIEKFYKELRKQKR 202

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357454807|ref|XP_003597684.1| hypothetical protein MTR_2g101120 [Medicago truncatula] gi|355486732|gb|AES67935.1| hypothetical protein MTR_2g101120 [Medicago truncatula]

 Score =  221 bits (563), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 114/197 (57%), Positives = 139/197 (70%), Gaps = 7/197 (3%)

Query: 6   NVQVIGKRIWSVVRVVFFMLRKGLCKRKLLVDLNMMLKRGKIAGGKALNNLIHHHHHHHY 65
           N+ VI K++WS+VRV FFMLRKG+ K KL++ LNMMLKR     GKA+ NL+ HHHH+H 
Sbjct: 4   NLPVISKKVWSMVRVAFFMLRKGMSKGKLMMGLNMMLKRRSKLAGKAIANLMFHHHHNHG 63

Query: 66  HHHRGHESSFHMAAQREYEFSCSNTPNYTFPYFHNANSNKRSKNNFLFGCAHAPATLDDN 125
                  S     A REYEFSCSNTPN+ FP         RS NNF    A AP T DD 
Sbjct: 64  GSTSSRRSHHQFTASREYEFSCSNTPNHFFPI----GKRHRSHNNFS-TSAQAPPTQDD- 117

Query: 126 DAATVNAVKVVLEMLNNDK-LVEASPALPGFGRSPFVRPLRITDSPFPLKDTDDDSGYVD 184
           D AT++A+K VLEML+ND+ +VEASPALPGFGRSP VR LR+TDSPFPL++ D+    VD
Sbjct: 118 DVATMSAMKAVLEMLSNDQSIVEASPALPGFGRSPMVRQLRVTDSPFPLREDDEKDDQVD 177

Query: 185 KAAEEFIQKFYKELKNQ 201
           KAAE+FI +FY +L+NQ
Sbjct: 178 KAAEDFINRFYSQLRNQ 194

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147768061|emb|CAN64915.1| hypothetical protein VITISV_030073 [Vitis vinifera]

 Score =  220 bits (560), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 120/198 (60%), Positives = 140/198 (70%), Gaps = 9/198 (4%)

Query: 6   NVQVIGKRIWSVVRVVFFMLRKGLCKRKLLVDLNMMLKRGKIAGGKALNNLIHHHHHHHY 65
           N+  I KR+W +VRV+FFMLRKG+ KRKLL+DLNMM+KRGKIA GKA+ NL+ HHH    
Sbjct: 12  NLPXIAKRLWGIVRVMFFMLRKGISKRKLLLDLNMMMKRGKIA-GKAIGNLMFHHHSSSA 70

Query: 66  HHHRGHESSFHMAAQREYEFSCSNTPNYTFPYFHNANSNKRSKNNF-LFGCAHAPATLDD 124
              R  +     AA REYEFSCSN+P Y  PY    N NKR  N+  +F C        D
Sbjct: 71  -ARRSADGHISFAAPREYEFSCSNSPAY--PYHFPFNFNKRKHNHHNIFSCVFQTPPTSD 127

Query: 125 NDAATVNAVKVVLEMLNNDKLVEASPALPGFGRSPFVRPLRITDSPFPLKDTDDDSGYVD 184
           +D  TVNAVK VLEMLN++    ASPALPGFGRSP VR LRITDSPFPLKD D+DS  VD
Sbjct: 128 DDFTTVNAVKAVLEMLNSE---VASPALPGFGRSPMVRQLRITDSPFPLKDIDEDSE-VD 183

Query: 185 KAAEEFIQKFYKELKNQK 202
           KAAEEFI++FY +LK QK
Sbjct: 184 KAAEEFIERFYNDLKKQK 201

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225442493|ref|XP_002283976.1| PREDICTED: uncharacterized protein LOC100248099 [Vitis vinifera]

 Score =  219 bits (558), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 120/198 (60%), Positives = 140/198 (70%), Gaps = 9/198 (4%)

Query: 6   NVQVIGKRIWSVVRVVFFMLRKGLCKRKLLVDLNMMLKRGKIAGGKALNNLIHHHHHHHY 65
           N+  I KR+W +VRV+FFMLRKG+ KRKLL+DLNMM+KRGKIA GKA+ NL+ HHH    
Sbjct: 12  NLPGIAKRLWGIVRVMFFMLRKGISKRKLLLDLNMMMKRGKIA-GKAIGNLMFHHHSSSA 70

Query: 66  HHHRGHESSFHMAAQREYEFSCSNTPNYTFPYFHNANSNKRSKNNF-LFGCAHAPATLDD 124
              R  +     AA REYEFSCSN+P Y  PY    N NKR  N+  +F C        D
Sbjct: 71  -ARRSADGHISFAAPREYEFSCSNSPAY--PYHFPFNFNKRKHNHHNIFSCVFQTPPTSD 127

Query: 125 NDAATVNAVKVVLEMLNNDKLVEASPALPGFGRSPFVRPLRITDSPFPLKDTDDDSGYVD 184
           +D  TVNAVK VLEMLN++    ASPALPGFGRSP VR LRITDSPFPLKD D+DS  VD
Sbjct: 128 DDFTTVNAVKAVLEMLNSE---VASPALPGFGRSPMVRQLRITDSPFPLKDIDEDS-EVD 183

Query: 185 KAAEEFIQKFYKELKNQK 202
           KAAEEFI++FY +LK QK
Sbjct: 184 KAAEEFIERFYNDLKKQK 201

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356550506|ref|XP_003543627.1| PREDICTED: uncharacterized protein LOC100802625 [Glycine max]

 Score =  217 bits (553), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 119/201 (59%), Positives = 150/201 (74%), Gaps = 19/201 (9%)

Query: 6   NVQVIGKRIWSVVRVVFFMLRKGLCKRKLLVDLNMMLK-RGKIAGGKALNNLIHHHHHHH 64
           N  V+ +++WS+VRV+ FMLRKG+ K KL++DLNMMLK RGK+A GKA+ NL+ H+    
Sbjct: 4   NAPVLAEKVWSMVRVLLFMLRKGISKGKLMMDLNMMLKRRGKLA-GKAIANLMSHN---- 58

Query: 65  YHHHRG-HESSFHMAAQREYEFSCSNTPNYTFPYFHNANSNKRSKNNFLFGCAHAPATLD 123
            H+HRG H+S    +A REYEFSCSNTP+  FP      + KR ++   F C HAP T D
Sbjct: 59  -HNHRGSHKSQLRFSAPREYEFSCSNTPHNLFP-----TAGKRHRH--FFACVHAPPTQD 110

Query: 124 DNDAATVNAVKVVLEMLNNDKL--VEASPALPGFGRSPFVRPLRITDSPFPLKDTDDDSG 181
           D D  TVNA+K VLEMLNN+ +  VEASPALPGFGRSP VR LR+TDSPFPL+D+D D+ 
Sbjct: 111 D-DVVTVNAMKAVLEMLNNNDVVKVEASPALPGFGRSPIVRQLRVTDSPFPLRDSDHDND 169

Query: 182 Y-VDKAAEEFIQKFYKELKNQ 201
           + VDKAAEEFI++FYK+LK Q
Sbjct: 170 HQVDKAAEEFIKRFYKDLKKQ 190

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356556470|ref|XP_003546548.1| PREDICTED: uncharacterized protein LOC100786928 [Glycine max]

 Score =  214 bits (544), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 117/208 (56%), Positives = 144/208 (69%), Gaps = 16/208 (7%)

Query: 1   MERSQNVQVIGKRIWSVVRVVFFMLRKGLCKRKLLVDLNMMLK-RGKIAGGKALNNLIHH 59
           +E   N   + K++WS+VRVV FMLRKG+ K KL++DLNMMLK RGK+AG    N +  H
Sbjct: 4   IEMESNASALAKKVWSMVRVVLFMLRKGITKGKLMMDLNMMLKRRGKLAGKAIANLMSSH 63

Query: 60  HHHHHYHHHRGHESSFHMAAQREYEFSCSNTP-NYTFPYFHNANSNKRSKNNFLFGCAHA 118
           HHH+    H  H   F  +A REYEFSCSNTP N+ FP        K  +++F F C HA
Sbjct: 64  HHHNRGGSHNSHHLKF--SAPREYEFSCSNTPHNFFFP-----TGGKHHRHHF-FACVHA 115

Query: 119 PATLDDNDAATVNAVKVVLEMLNNDK----LVEASPALPGFGRSPFVRPLRITDSPFPLK 174
           P T DD D  TVNA+K V+EMLNN+      VEASPALPGFGRSP VR LR+TDSPFPL+
Sbjct: 116 PPTQDD-DVVTVNAMKAVMEMLNNNNNDAVKVEASPALPGFGRSPMVRQLRVTDSPFPLR 174

Query: 175 DTDDDSGY-VDKAAEEFIQKFYKELKNQ 201
           D D D+ + VDKAAE+FI++FYKEL+ Q
Sbjct: 175 DADQDNDHLVDKAAEDFIKRFYKELRKQ 202

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357513443|ref|XP_003627010.1| hypothetical protein MTR_8g014030 [Medicago truncatula] gi|355521032|gb|AET01486.1| hypothetical protein MTR_8g014030 [Medicago truncatula]

 Score =  211 bits (537), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 116/199 (58%), Positives = 146/199 (73%), Gaps = 16/199 (8%)

Query: 6   NVQVIGKRIWSVVRVVFFMLRKGLCKRKLLVDLNMMLKR-GKIAGGKALNNLIHHHHHHH 64
           NV +I KR+WS++RV  FMLRKG+ K KL++DLNMM+KR GK+AG KA+ NL+ HHHH  
Sbjct: 4   NVPIITKRVWSMIRVALFMLRKGISKGKLMMDLNMMVKRRGKLAG-KAITNLMFHHHHGG 62

Query: 65  YHHHRGHESSFHMAAQREYEFSCSNTPNYTFPYFHNANSNKRSKNNFLFGCAHAPATLDD 124
               R +++   ++  REYEFSCSNTPNY F     A +NKR  +NF F CAHAP T +D
Sbjct: 63  STSSRRNDT--RLSTTREYEFSCSNTPNYKF-----ALNNKR--HNF-FTCAHAPLTKED 112

Query: 125 NDAATVNAVKVVLEML--NNDKLVEASPALPGFGRSPFVRPLRITDSPFPLKDTDDDSGY 182
            D  TVNAVK VLE +  NN+ +VEASPALPGFGR+P  R LR+TDSPFPL DTD D+  
Sbjct: 113 -DIVTVNAVKAVLESMVNNNEVIVEASPALPGFGRTPKARQLRVTDSPFPLHDTDADA-E 170

Query: 183 VDKAAEEFIQKFYKELKNQ 201
           VDKAA+ FI++FY +L+ Q
Sbjct: 171 VDKAADAFIRRFYSQLRKQ 189

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356522242|ref|XP_003529756.1| PREDICTED: uncharacterized protein LOC100801941 [Glycine max]

 Score =  203 bits (517), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 120/204 (58%), Positives = 143/204 (70%), Gaps = 17/204 (8%)

Query: 5   QNVQVIGKRIWSVVRVVFFMLRKGLCKRKLLVDLN-MMLKRGKIAGGKALNNLIHHHHHH 63
            N  VI K++ S++RV FFMLRKG+ K KL++ LN MMLKR     GKA+ NL+ HHHH+
Sbjct: 3   SNTPVIAKKVLSIIRVAFFMLRKGISKGKLMMHLNNMMLKRP----GKAIANLMFHHHHN 58

Query: 64  HYHHHRGHESSFHMAAQREYEFSCSNTPNYTFPYFHNANSNKRSKNNFLFGCAHAPATLD 123
           H     G+   F  A  REYEFSCSNTPN  F     A++NKR ++N  F CAHAP TLD
Sbjct: 59  H--GVSGNNLQFSTA--REYEFSCSNTPNNFFAAAL-ASNNKRHRHNPFFTCAHAPPTLD 113

Query: 124 DNDAATVNAVKVVLEMLNNDKLVEASP----ALPGFGRSPFVRPL-RITDSPFPLKDTDD 178
           D DA TVNAVK VLEMLNN+   EASP    AL GFGRSP VR L R+TDSPFPL +++D
Sbjct: 114 D-DAVTVNAVKGVLEMLNNEAFEEASPAVATALSGFGRSPMVRKLIRVTDSPFPLGESED 172

Query: 179 D-SGYVDKAAEEFIQKFYKELKNQ 201
           D    VDKAAEEFI++FYKEL+ Q
Sbjct: 173 DKDNQVDKAAEEFIKRFYKELRKQ 196

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356528918|ref|XP_003533044.1| PREDICTED: uncharacterized protein LOC100786760 [Glycine max]

 Score =  201 bits (512), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 118/200 (59%), Positives = 140/200 (70%), Gaps = 17/200 (8%)

Query: 6   NVQVIGKRIWSVVRVVFFMLRKGLCKRKLLVDLN-MMLKRGKIAGGKALNNLIHHHHHHH 64
           N  VI K+  S++ V  FMLRKG+ K KL++ LN MMLKR     GKA+ NL+ HH+H  
Sbjct: 4   NTPVIAKKELSIIHVALFMLRKGISKGKLMMHLNNMMLKRP----GKAIANLMFHHNHG- 58

Query: 65  YHHHRGHESSFHMAAQREYEFSCSNTPNYTFPYFHNANSNKRSKNNFLFGCAHAPATLDD 124
                   +S H +A REYEFSCSNTPN  F     A+SNKR ++   F CAHAP TLDD
Sbjct: 59  -----VSGNSLHFSAAREYEFSCSNTPNNFFAAI--ASSNKRHRHIPFFTCAHAPPTLDD 111

Query: 125 NDAATVNAVKVVLEMLNNDKLVEASPA-LPGFGRSPFVRPL-RITDSPFPLKDTDDD-SG 181
            D ATVNAVK VLEMLNN+ +VEASPA LPGFGRSP VR L R+TDSPFPL ++ DD   
Sbjct: 112 -DVATVNAVKGVLEMLNNETVVEASPAALPGFGRSPMVRQLIRVTDSPFPLVESQDDKDN 170

Query: 182 YVDKAAEEFIQKFYKELKNQ 201
            VDKAAEEFI++FYKEL+ Q
Sbjct: 171 QVDKAAEEFIKRFYKELRKQ 190

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255549850|ref|XP_002515976.1| conserved hypothetical protein [Ricinus communis] gi|223544881|gb|EEF46396.1| conserved hypothetical protein [Ricinus communis]

 Score =  199 bits (507), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 127/212 (59%), Positives = 150/212 (70%), Gaps = 13/212 (6%)

Query: 1   MERSQNVQVIGKRIWSVVRVVFFMLRKGL-CKRKLLVDLNMMLKRGKIAGGKALNNLIHH 59
           ME+S N+ V+ KR+W  VRV+FFMLRKG+  KRKLLVDLNMMLKRG     KA+ NL+ H
Sbjct: 20  MEQS-NLPVMAKRLWETVRVIFFMLRKGISTKRKLLVDLNMMLKRGNKIASKAIGNLMFH 78

Query: 60  HHHHHYHHHRGHESSFHMAAQREYEFSCSNTPNYTFPY---FHNANSNKRSKNNFLFGCA 116
           HH +H  HH  H+ SF  A   EYEFSCSNTP YT P+       + N   + N  F CA
Sbjct: 79  HHDNH-CHHHSHDLSFS-APPHEYEFSCSNTPMYTLPFHANKRRHHHNNHHQYNNFFSCA 136

Query: 117 -HAPATLDDNDAATVNAVKVVLEMLNN---DKLVEA-SPALPGFGRSPFVRPLRITDSPF 171
            +AP TLDD D  T+NAVK+ LEMLNN   +  VEA SP LPGFGRSP VR LRITDSPF
Sbjct: 137 FNAPPTLDD-DVTTMNAVKLALEMLNNNNNETAVEAPSPMLPGFGRSPMVRQLRITDSPF 195

Query: 172 PLKDTDDDSGYVDKAAEEFIQKFYKELKNQKR 203
           PL+D D D+G VDK AEEFI+KFYKEL+ Q++
Sbjct: 196 PLRDDDYDNGIVDKKAEEFIEKFYKELRQQQK 227

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	208
TAIR|locus:2034071	208	AT1G52140 "AT1G52140" [Arabido	0.908	0.908	0.445	2.9e-39
TAIR|locus:2094932	205	AT3G16330 "AT3G16330" [Arabido	0.875	0.887	0.460	6.5e-35
TAIR|locus:2119911	200	AT4G29110 "AT4G29110" [Arabido	0.389	0.405	0.523	3.2e-28
TAIR|locus:2134118	199	AT4G32860 "AT4G32860" [Arabido	0.480	0.502	0.306	3.8e-10

TAIR|locus:2034071 AT1G52140 "AT1G52140" [Arabidopsis thaliana (taxid:3702)]

 Score = 419 (152.6 bits), Expect = 2.9e-39, P = 2.9e-39
 Identities = 94/211 (44%), Positives = 128/211 (60%)

Query:     5 QNVQVIGKRIWSVVRVVFFMLRKGLCKRKLLVDLNMMLKRGKIAGGKALNNLIXXXXXXX 64
             QNV  I K++W++VR + +M+RKG+ K KL+ D N  LKRGK      + +         
Sbjct:     3 QNVP-ISKKLWNIVRFLLYMIRKGVSKNKLIADFNATLKRGK----NLMFHQRRRVHAGS 57

Query:    65 XXXXRGHESSFHMAAQREYEFSCSNTPNYTFPYFHNANSNKRSKNNFLFGCAHAPATLDD 124
                   + +S   ++++EYEFSCSNTPNY+FP+ + A   K+S NN LF C   P TLDD
Sbjct:    58 TASAALNATSATASSRQEYEFSCSNTPNYSFPFSNMAFMRKKSHNN-LFTCGQTPQTLDD 116

Query:   125 NDAATVNAVKVVLEMLNN----------DKLVEASPALPGFGRSPFVRPLRITDSPFPLK 174
             +    V A + VLE+LN           D  V  SP  PGFG++P VRPLR+TDSPFPL 
Sbjct:   117 D----VAAARAVLELLNGVGEKGNVTPADLTVALSPYFPGFGQTPLVRPLRVTDSPFPLT 172

Query:   175 DTDDD--SGYVDKAAEEFIQKFYKELKNQKR 203
               + D  +G+VDKAA++FI+KFYK L  QK+
Sbjct:   173 PENGDVANGHVDKAADDFIKKFYKNLNQQKK 203

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2094932 AT3G16330 "AT3G16330" [Arabidopsis thaliana (taxid:3702)]

 Score = 378 (138.1 bits), Expect = 6.5e-35, P = 6.5e-35
 Identities = 98/213 (46%), Positives = 126/213 (59%)

Query:     5 QNVQVIGKRIWSVVRVVFFMLRKGLCKRKLLVDLNMMLKRGKIAGGKALNNLIXXXXXXX 64
             +N+  I K++ ++VR V +ML KG+ K+KLL D N  LKRGK        NL+       
Sbjct:     3 KNIS-ISKKLGNIVRFVLYMLHKGISKQKLLADFNATLKRGK--------NLMFHNRRRV 53

Query:    65 XXXXRGHESSFHMAAQREYEFSCSNTPNYTFPYFHNANSNKRSKNNFLFGCAHAPATLDD 124
                  G   + H   Q EYEFSCS+TPNYTFP F+ A   K+S +N LF C  AP TLDD
Sbjct:    54 P----GSAVASH--PQNEYEFSCSDTPNYTFP-FNMAAFKKKSHHNSLFSCGQAPPTLDD 106

Query:   125 NDAATVNAVKVVL------EMLNN------DKLVEASPALPGFGRSPF-VRPLRITDSPF 171
              D +   AV  +L      +  +N      + L   SP LPGFGRS   VRPLR+TDSPF
Sbjct:   107 -DTSVSRAVLELLNSGGDHDQGSNTPAFSIEALTALSPYLPGFGRSTSSVRPLRVTDSPF 165

Query:   172 PLKDTDD-DSGYVDKAAEEFIQKFYKELKNQKR 203
             PL++  D  +G+VDKAA+EFI+KFYK L  QK+
Sbjct:   166 PLREEGDVANGHVDKAADEFIKKFYKNLYQQKK 198

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0052542 "defense response by callose deposition" evidence=RCA

TAIR|locus:2119911 AT4G29110 "AT4G29110" [Arabidopsis thaliana (taxid:3702)]

 Score = 179 (68.1 bits), Expect = 3.2e-28, Sum P(2) = 3.2e-28
 Identities = 44/84 (52%), Positives = 52/84 (61%)

Query:   123 DDNDAATVNAVKVVLEMLN-NDKLVEASPAL--PGFGRSPFVRPLRITDSPFPLKDTDDD 179
             D+ + A   AVK V E+L  NDK   A+ +        SP VR LR+TDSPFPL D  D 
Sbjct:   102 DNEEDAVEAAVKKVFELLGENDKKTVATESARESPLIMSPAVRQLRVTDSPFPLDDGGDH 161

Query:   180 SGYVDKAAEEFIQKFYKELKNQKR 203
                VDKAAEEFI+KFYK LK QK+
Sbjct:   162 DHVVDKAAEEFIKKFYKNLKLQKK 185

GO:0003674 "molecular_function" evidence=ND

GO:0005773 "vacuole" evidence=IDA

GO:0010200 "response to chitin" evidence=IEP

TAIR|locus:2134118 AT4G32860 "AT4G32860" [Arabidopsis thaliana (taxid:3702)]

 Score = 104 (41.7 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
 Identities = 34/111 (30%), Positives = 55/111 (49%)

Query:     9 VIGKRIWSVVRVVFFMLRK--GLCKRKLL--VDLNMMLKRGKIAGGKALNNLIXXXXXXX 64
             V  K++ S+ +++ F ++K     + KLL  +D +++ KRGKI   K+LN  +       
Sbjct:    13 VTTKKLSSLAKLILFTIQKVSDASRHKLLTTLDPHLLAKRGKILR-KSLNEAVSTSHSRI 71

Query:    65 XXXXRGHE---SSF--HMAAQREYEFSCSNTPNYTFPYFHNANSNKRSKNN 110
                   H+   SSF   +  Q EYEFSCS+TP     Y    +  +RS  +
Sbjct:    72 TCRPSDHQDVRSSFISPVPLQLEYEFSCSSTPPRR-SYATTVSKGRRSNGS 121

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009691 "cytokinin biosynthetic process" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	208
PRK10019	279	PRK10019, PRK10019, nickel/cobalt efflux protein R	4e-04
pfam05553	38	pfam05553, DUF761, Cotton fibre expressed protein	0.001
pfam10986	161	pfam10986, DUF2796, Protein of unknown function (D	0.002

>gnl|CDD|236641 PRK10019, PRK10019, nickel/cobalt efflux protein RcnA; Provisional

 Score = 39.8 bits (93), Expect = 4e-04
 Identities = 11/27 (40%), Positives = 13/27 (48%)

Query: 58  HHHHHHHYHHHRGHESSFHMAAQREYE 84
           H H H H+H H  H    H A   EY+
Sbjct: 129 HDHDHEHHHDHGHHHHHEHGATAEEYQ 155

Length = 279

>gnl|CDD|218633 pfam05553, DUF761, Cotton fibre expressed protein

 Score = 35.2 bits (82), Expect = 0.001
 Identities = 10/20 (50%), Positives = 16/20 (80%)

Query: 183 VDKAAEEFIQKFYKELKNQK 202
           VD+ AEEFI +F ++L+ Q+
Sbjct: 5   VDRRAEEFIARFREQLRLQR 24

This family consists of several plant proteins of unknown function. Three of the sequences (from Gossypium hirsutum) in this family are described as cotton fibre expressed proteins. The remaining sequences, found in Arabidopsis thaliana, are uncharacterized. Length = 38

>gnl|CDD|220924 pfam10986, DUF2796, Protein of unknown function (DUF2796)

 Score = 36.9 bits (86), Expect = 0.002
 Identities = 14/32 (43%), Positives = 18/32 (56%)

Query: 58  HHHHHHHYHHHRGHESSFHMAAQREYEFSCSN 89
            HH H H+ HH  HE + H     EY+F+C N
Sbjct: 87  DHHDHDHHDHHDDHEHAGHSDFHAEYQFTCEN 118

This bacterial family of proteins has no known function. Length = 161

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	208
PF05553	38	DUF761: Cotton fibre expressed protein; InterPro:	99.07

>PF05553 DUF761: Cotton fibre expressed protein; InterPro: IPR008480 This family consists of several plant proteins of unknown function

Probab=99.07  E-value=6.6e-11  Score=77.85  Aligned_cols=28  Identities=39%  Similarity=0.583  Sum_probs=25.7

Q ss_pred             chhhhHHHHHHHHHHHHHHhhhhhhhcC
Q 028482          180 SGYVDKAAEEFIQKFYKELKNQKRSMAD  207 (208)
Q Consensus       180 ~~~vD~~Ae~FI~~Fy~qlr~q~~~~~~  207 (208)
                      +++||++||+||++||+|||+|++.|+.
T Consensus         2 ~~evd~rAe~FI~~f~~qlrlqr~~S~~   29 (38)
T PF05553_consen    2 DDEVDRRAEEFIAKFREQLRLQRQESLQ   29 (38)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4689999999999999999999998864

Three of the sequences from Gossypium hirsutum (Upland cotton) in this family are described as G. hirsutum fibre expressed proteins []. The remaining sequences, found in Arabidopsis thaliana, are uncharacterised.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	208
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-04
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	7e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.2 bits (93), Expect = 3e-04
 Identities = 25/136 (18%), Positives = 37/136 (27%), Gaps = 30/136 (22%)

Query: 58  HHHHHH-------HYHHHRGHESSFHMAAQREYEFSCSNTPNYTFPYFHNAN-------S 103
           HHHHHH       H + ++   S F  A      F C +  +                  
Sbjct: 1   HHHHHHMDFETGEHQYQYKDILSVFEDAFVD--NFDCKDVQDMPKSILSKEEIDHIIMSK 58

Query: 104 NKRSKNNFLFGCAHAPATLDDNDAATVNA-VKVVLEMLNNDKLVEA------SPALPGFG 156
           +  S    LF        L       V   V+ VL  +N   L+         P++    
Sbjct: 59  DAVSGTLRLFWT------LLSKQEEMVQKFVEEVLR-INYKFLMSPIKTEQRQPSMMTRM 111

Query: 157 RSPFVRPLRITDSPFP 172
                  L   +  F 
Sbjct: 112 YIEQRDRLYNDNQVFA 127

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 39.5 bits (91), Expect = 6e-04
 Identities = 34/231 (14%), Positives = 64/231 (27%), Gaps = 76/231 (32%)

Query: 8   QVIGKRIW--SVVRVVFFMLRKGLCKRKLLVDLNMMLKRGKIAGGKALNNLIH-HHHHHH 64
            ++   IW   +   V  ++ K    +  LV+     K+ K        + I     +  
Sbjct: 390 ILLS-LIWFDVIKSDVMVVVNK--LHKYSLVE-----KQPK-------ESTISIPSIYLE 434

Query: 65  YHHHRGHESSFHMAAQREYEFS---CSNTP------NYTFPYF--HNANSNKRSKNNF-- 111
                 +E + H +    Y       S+         Y + +   H  N     +     
Sbjct: 435 LKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFR 494

Query: 112 -LFGCAHAPATLDDN--------DAATVNAVKVVLEMLNN-----DKLVEASPA------ 151
            +F        LD          D+   NA   +L  L         + +  P       
Sbjct: 495 MVF--------LDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVN 546

Query: 152 -----LPGFG----RSPFVRPLRITDSPFPLKDTDDDSGYVDKAAEEFIQK 193
                LP        S +   LRI           +D    ++A ++ +Q+
Sbjct: 547 AILDFLPKIEENLICSKYTDLLRIALMA-------EDEAIFEEAHKQ-VQR 589

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score = 38.7 bits (91), Expect = 7e-04
 Identities = 13/23 (56%), Positives = 15/23 (65%)

Query: 58 HHHHHHHYHHHRGHESSFHMAAQ 80
          HHHHHHH+HH  GH    HM  +
Sbjct: 3  HHHHHHHHHHSSGHIEGRHMKLE 25

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00