Citrus Sinensis ID: 028597

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------
MLYALSAPKTCISCPRGPPFPQKRQVSTRLCVHASLPADNGGFKVEYTPWLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQV
ccccccccccccccccccccccccccccEEEEEEcccccccccccccccEEEEEccccccccccccccHHHHHHHHHHHHcccccccccEEEEEEEEEEccEEEEEEccccccccccccHHHHHHHcccccccEEEEEccccccccCEEEcccccccccccHHHHHHHccccccccEEEEECccccccccccccccccccHHHHHcc
*******PK****************VSTRLCVHASLPADNGGFKVEYTPWLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPGKMDMKAYLLQKFS*******
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MLYALSAPKTCISCPRGPPFPQKRQVSTRLCVHASLPADNGGFKVEYTPWLIVGLGNPGIKYHGTRHNVGFEMIDHIAQAQRIAMNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAHYQVPLRHILVIYDEMSLMNGVLRLQPKGGHGHHNGLKSVMNHLDGCREFPRLCIGIGNPPGKMDMKAYLLQKFSPIEREQV

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Chloroplastic group IIB intron splicing facilitator CRS2-A, chloroplastic Required for the splicing of group IIB introns in chloroplasts.confidentQ9FKN4
Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic Required for the splicing of group IIB introns in chloroplasts.probableQ5ZCL8

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
3.-.-.-Hydrolases.probable
3.1.-.-Acting on ester bonds.probable
3.1.1.-Carboxylic ester hydrolases.probable
3.1.1.29Aminoacyl-tRNA hydrolase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1RYB, chain A
Confidence level:very confident
Coverage over the Query: 47-207
View the alignment between query and template
View the model in PyMOL