Citrus Sinensis ID: 028625

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200------

MENNQQGQSSSYPPQPPSAAAAATATAPFHHLIQQQQQQLQMFWSYQRQEIEQANDFKNHQLPLARIKKIMKADEDVRMISAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAAGLGGMVGATASGVPYYYPPMGQPTGTAGPGGMMIGRPAVDPTGVYVQPPSQAWQSVWQTPAGTGDDGSYGSGGSGGPANLDGQG

cccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHccccccHHHHHHHccccccHHHHHHHHHHccccccccccccccccccHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc

****************************FHHLIQQQQQQLQMFWSYQRQEIEQANDFKNHQLPLARIKKIMKADEDV**********RTLQKNDIAAAITRTDIFDFLVDIVPRDEIK***************GVPYYYPP*******************V*PTGVYVQ****AWQ******************************

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Nuclear transcription factor Y subunit C-1	Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters.	probable	Q9SMP0

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1N1J, chain B
Confidence level:very confident
Coverage over the Query: 62-114
View the alignment between query and template
View the model in PyMOL