Citrus Sinensis ID: 028901


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200--
MVKGRNHHGAGVIRLRGEEKEKVKGHYSICAIGGMLSAGTAHLAITPLDVVKVNMQVHPIKYSSIASCYTNLLKEQGASAFWRGSAAKFFGYGAQGGCRFGLYEYFKSLYSSVLGDCSRSSVFFLSSASAEVFANVALCPFEAIKVQVQAQPHFAKGLADGIPKLYASEGIFGFYRGLIPLLGRNLPYIERYLRCFPFVNVF
cccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccccccHHHHHHHHHHHHcHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHccccccccHHHHHHHHHHHHccccccccHHHHHHHHHccccEEEEEccccccc
cccccccHHcccccccccHHcccccHHHHHHHHHHHHHHHHHHccccHHHEEHHEHccccHHccHHHHHHHHHHHcccHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHccccccHHHHHHHHHHHHcccHHHHccccHHHHHHHcHHHEEEEEHHHHEcc
mvkgrnhhgagvirlrgeekekvkghYSICAIGGMLSAGTAHLAITPLDVVKVnmqvhpikySSIASCYTNLLKEQGASAFWRGSAAkffgygaqggcrfgLYEYFKSLYSSvlgdcsrssvFFLSSASAEVFANVALCPFEAIKVQVQAQPhfakgladgipklyasegifGFYRGLipllgrnlpyIERYLRCFPFVNVF
mvkgrnhhgagvirlrgeekekvKGHYSICAIGGMLSAGTAHLAITPLDVVKVNMQVHPIKYSSIASCYTNLLKEQGASAFWRGSAAKFFGYGAQGGCRFGLYEYFKSLYSSVLGDCSRSSVFFLSSASAEVFANVALCPFEAIKVQVQAQPHFAKGLADGIPKLYASEGIFGFYRGLIPLLGRNLPYIERYLRCFPFVNVF
MVKGRNHHGAGVIRLRGEEKEKVKGHYSICAIGGMLSAGTAHLAITPLDVVKVNMQVHPIKYSSIASCYTNLLKEQGASAFWRGSAAKFFGYGAQGGCRFGLYEYFKSLYSSVLGDCsrssvfflssasaevfaNVALCPFEAIKVQVQAQPHFAKGLADGIPKLYASEGIFGFYRGLIPLLGRNLPYIERYLRCFPFVNVF
*********************KVKGHYSICAIGGMLSAGTAHLAITPLDVVKVNMQVHPIKYSSIASCYTNLLKEQGASAFWRGSAAKFFGYGAQGGCRFGLYEYFKSLYSSVLGDCSRSSVFFLSSASAEVFANVALCPFEAIKVQVQAQPHFAKGLADGIPKLYASEGIFGFYRGLIPLLGRNLPYIERYLRCFPFVNV*
**************************YSICAIGGMLSAGTAHLAITPLDVVKVNMQVHPIKYSSIASCYTNLLKEQGASAFWRGSAAKFFGYGAQGGCRFGLYEYFKSLYSSVLGDCSRSSVFFLSSASAEVFANVALCPFEAIKVQVQAQPHFAKGLADGIPKLYASEGIFGFYRGLIPLLGRNLPYIERYLRCFPFVNVF
MVKGRNHHGAGVIRLRGEEKEKVKGHYSICAIGGMLSAGTAHLAITPLDVVKVNMQVHPIKYSSIASCYTNLLKEQGASAFWRGSAAKFFGYGAQGGCRFGLYEYFKSLYSSVLGDCSRSSVFFLSSASAEVFANVALCPFEAIKVQVQAQPHFAKGLADGIPKLYASEGIFGFYRGLIPLLGRNLPYIERYLRCFPFVNVF
****RNHHGAG**RLRGE***KVKGHYSICAIGGMLSAGTAHLAITPLDVVKVNMQVHPIKYSSIASCYTNLLKEQGASAFWRGSAAKFFGYGAQGGCRFGLYEYFKSLYSSVLGDCSRSSVFFLSSASAEVFANVALCPFEAIKVQVQAQPHFAKGLADGIPKLYASEGIFGFYRGLIPLLGRNLPYIERYLRCFPFVNVF
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooo
oooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MVKGRNHHGAGVIRLRGEEKEKVKGHYSICAIGGMLSAGTAHLAITPLDVVKVNMQVHPIKYSSIASCYTNLLKEQGASAFWRGSAAKFFGYGAQGGCRFGLYEYFKSLYSSVLGDCSRSSVFFLSSASAEVFANVALCPFEAIKVQVQAQPHFAKGLADGIPKLYASEGIFGFYRGLIPLLGRNLPYIERYLRCFPFVNVF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query202 2.2.26 [Sep-21-2011]
Q7DNC3 309 Mitochondrial phosphate c yes no 0.871 0.569 0.625 2e-63
Q9FMU6 375 Mitochondrial phosphate c no no 0.801 0.432 0.524 2e-46
Q9M2Z8 363 Mitochondrial phosphate c no no 0.836 0.465 0.485 1e-45
Q8VEM8 357 Phosphate carrier protein yes no 0.846 0.478 0.457 6e-41
Q5R7W2 361 Phosphate carrier protein yes no 0.846 0.473 0.462 1e-36
P12234 362 Phosphate carrier protein yes no 0.841 0.469 0.465 2e-36
Q00325 362 Phosphate carrier protein yes no 0.841 0.469 0.459 3e-36
P16036 356 Phosphate carrier protein yes no 0.846 0.480 0.445 5e-36
P40614 340 Phosphate carrier protein yes no 0.950 0.564 0.408 3e-33
P40035 300 Mitochondrial phosphate c yes no 0.811 0.546 0.422 6e-32
>sp|Q7DNC3|MPCP1_ARATH Mitochondrial phosphate carrier protein 1, mitochondrial OS=Arabidopsis thaliana GN=MPT1 PE=2 SV=1 Back     alignment and function desciption
 Score =  241 bits (616), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 110/176 (62%), Positives = 142/176 (80%)

Query: 13  IRLRGEEKEKVKGHYSICAIGGMLSAGTAHLAITPLDVVKVNMQVHPIKYSSIASCYTNL 72
           ++ + +E+      Y++C +GGMLSAGT HLAITPLDV+KVNMQV+P+KY+SI S ++ L
Sbjct: 4   VKSKLDEELSSPWFYTVCTMGGMLSAGTTHLAITPLDVLKVNMQVNPVKYNSIPSGFSTL 63

Query: 73  LKEQGASAFWRGSAAKFFGYGAQGGCRFGLYEYFKSLYSSVLGDCSRSSVFFLSSASAEV 132
           L+E G S  WRG + K  GYG QGGCRFGLYEYFK+LYS VL + +R+S++FLSSASA++
Sbjct: 64  LREHGHSYLWRGWSGKLLGYGVQGGCRFGLYEYFKTLYSDVLPNHNRTSIYFLSSASAQI 123

Query: 133 FANVALCPFEAIKVQVQAQPHFAKGLADGIPKLYASEGIFGFYRGLIPLLGRNLPY 188
           FA++ALCPFEAIKV+VQ QP FAKGL DG P++Y SEG+ GF+RGL PL  RNLP+
Sbjct: 124 FADMALCPFEAIKVRVQTQPMFAKGLLDGFPRVYRSEGLAGFHRGLFPLWCRNLPF 179




Transport of phosphate groups from the cytosol to the mitochondrial matrix. Mediates salt stress tolerance through an ATP-dependent pathway and via modulation of the gibberellin metabolism.
Arabidopsis thaliana (taxid: 3702)
>sp|Q9FMU6|MPCP3_ARATH Mitochondrial phosphate carrier protein 3, mitochondrial OS=Arabidopsis thaliana GN=MPT3 PE=1 SV=1 Back     alignment and function description
>sp|Q9M2Z8|MPCP2_ARATH Mitochondrial phosphate carrier protein 2, mitochondrial OS=Arabidopsis thaliana GN=MPT2 PE=2 SV=1 Back     alignment and function description
>sp|Q8VEM8|MPCP_MOUSE Phosphate carrier protein, mitochondrial OS=Mus musculus GN=Slc25a3 PE=1 SV=1 Back     alignment and function description
>sp|Q5R7W2|MPCP_PONAB Phosphate carrier protein, mitochondrial OS=Pongo abelii GN=SLC25A3 PE=2 SV=1 Back     alignment and function description
>sp|P12234|MPCP_BOVIN Phosphate carrier protein, mitochondrial OS=Bos taurus GN=SLC25A3 PE=1 SV=1 Back     alignment and function description
>sp|Q00325|MPCP_HUMAN Phosphate carrier protein, mitochondrial OS=Homo sapiens GN=SLC25A3 PE=1 SV=2 Back     alignment and function description
>sp|P16036|MPCP_RAT Phosphate carrier protein, mitochondrial OS=Rattus norvegicus GN=Slc25a3 PE=1 SV=1 Back     alignment and function description
>sp|P40614|MPCP_CAEEL Phosphate carrier protein, mitochondrial OS=Caenorhabditis elegans GN=F01G4.6 PE=2 SV=1 Back     alignment and function description
>sp|P40035|PIC2_YEAST Mitochondrial phosphate carrier protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PIC2 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query202
224084022296 mitochondrial phosphate carrier protein 0.866 0.591 0.742 3e-75
356496531 306 PREDICTED: phosphate carrier protein, mi 0.861 0.568 0.754 1e-70
225438422 310 PREDICTED: phosphate carrier protein, mi 0.811 0.529 0.762 3e-70
356538411 306 PREDICTED: phosphate carrier protein, mi 0.836 0.552 0.763 5e-70
255583440 313 mitochondrial phosphate carrier protein, 0.811 0.523 0.743 4e-69
147864482296 hypothetical protein VITISV_017369 [Viti 0.876 0.597 0.685 6e-67
225428320 308 PREDICTED: phosphate carrier protein, mi 0.876 0.574 0.685 7e-67
224131902279 mitochondrial phosphate carrier protein 0.806 0.584 0.723 4e-66
449454303 310 PREDICTED: phosphate carrier protein, mi 0.836 0.545 0.692 5e-64
449522570250 PREDICTED: phosphate carrier protein, mi 0.836 0.676 0.692 8e-64
>gi|224084022|ref|XP_002307199.1| mitochondrial phosphate carrier protein [Populus trichocarpa] gi|222856648|gb|EEE94195.1| mitochondrial phosphate carrier protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  286 bits (732), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 130/175 (74%), Positives = 154/175 (88%)

Query: 14  RLRGEEKEKVKGHYSICAIGGMLSAGTAHLAITPLDVVKVNMQVHPIKYSSIASCYTNLL 73
           RL+ ++     G+Y++CA+ GMLSAGT HLAITPLDV+KVNMQV+P+KY SI SC+T LL
Sbjct: 9   RLKAQDCRAATGYYALCAVSGMLSAGTTHLAITPLDVLKVNMQVNPVKYYSIYSCFTTLL 68

Query: 74  KEQGASAFWRGSAAKFFGYGAQGGCRFGLYEYFKSLYSSVLGDCSRSSVFFLSSASAEVF 133
           +EQG SAFWRG A KFFGYGAQGGCRFGLYEYFK+LYS+VL DC+RS +FF+SSASAEVF
Sbjct: 69  REQGPSAFWRGWAGKFFGYGAQGGCRFGLYEYFKTLYSNVLVDCNRSFIFFMSSASAEVF 128

Query: 134 ANVALCPFEAIKVQVQAQPHFAKGLADGIPKLYASEGIFGFYRGLIPLLGRNLPY 188
           AN+ALCPFEA+KV+VQAQPHFAKGLADG PK+Y +EG  GFYRGL+PL GRNLP+
Sbjct: 129 ANLALCPFEAVKVRVQAQPHFAKGLADGFPKVYRTEGFLGFYRGLVPLWGRNLPF 183




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356496531|ref|XP_003517120.1| PREDICTED: phosphate carrier protein, mitochondrial-like [Glycine max] Back     alignment and taxonomy information
>gi|225438422|ref|XP_002276257.1| PREDICTED: phosphate carrier protein, mitochondrial [Vitis vinifera] gi|296082574|emb|CBI21579.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356538411|ref|XP_003537697.1| PREDICTED: phosphate carrier protein, mitochondrial-like [Glycine max] Back     alignment and taxonomy information
>gi|255583440|ref|XP_002532479.1| mitochondrial phosphate carrier protein, putative [Ricinus communis] gi|223527804|gb|EEF29903.1| mitochondrial phosphate carrier protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|147864482|emb|CAN78388.1| hypothetical protein VITISV_017369 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225428320|ref|XP_002282989.1| PREDICTED: phosphate carrier protein, mitochondrial [Vitis vinifera] gi|297744469|emb|CBI37731.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224131902|ref|XP_002328136.1| mitochondrial phosphate carrier protein [Populus trichocarpa] gi|222837651|gb|EEE76016.1| mitochondrial phosphate carrier protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449454303|ref|XP_004144895.1| PREDICTED: phosphate carrier protein, mitochondrial-like [Cucumis sativus] gi|449471986|ref|XP_004153461.1| PREDICTED: phosphate carrier protein, mitochondrial-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449522570|ref|XP_004168299.1| PREDICTED: phosphate carrier protein, mitochondrial-like, partial [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query202
TAIR|locus:2827555 309 PHT3;3 "phosphate transporter 0.801 0.524 0.604 1.1e-50
UNIPROTKB|O80413 366 O80413 "Mitochondrial phosphat 0.891 0.491 0.468 3.2e-42
TAIR|locus:2174688 375 PHT3;1 "phosphate transporter 0.801 0.432 0.487 2e-40
TAIR|locus:2099413 363 PHT3;2 "phosphate transporter 0.806 0.449 0.461 6.1e-39
FB|FBgn0034497 374 CG9090 [Drosophila melanogaste 0.950 0.513 0.375 3.6e-34
UNIPROTKB|F8VVM2324 SLC25A3 "Phosphate carrier pro 0.846 0.527 0.411 1.5e-33
MGI|MGI:1353498 357 Slc25a3 "solute carrier family 0.846 0.478 0.4 2e-33
UNIPROTKB|G3V741 356 Slc25a3 "Phosphate carrier pro 0.846 0.480 0.4 2e-33
UNIPROTKB|P12234 362 SLC25A3 "Phosphate carrier pro 0.841 0.469 0.413 2.5e-33
UNIPROTKB|F1PXY4 361 SLC25A3 "Uncharacterized prote 0.841 0.470 0.413 2.5e-33
TAIR|locus:2827555 PHT3;3 "phosphate transporter 3;3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
 Identities = 98/162 (60%), Positives = 119/162 (73%)

Query:    27 YSICAIGGMLSAGTAHLAITPLDVVKVNMQVHPIKYSSIASCYTNLLKEQGASAFWRGSA 86
             Y++C +GGMLSAGT HLAITPLDV+KVNMQV+P+KY+SI S ++ LL+E G S  WRG +
Sbjct:    18 YTVCTMGGMLSAGTTHLAITPLDVLKVNMQVNPVKYNSIPSGFSTLLREHGHSYLWRGWS 77

Query:    87 AKFFGYGAQGGCRFGLYEYFKSLYSSVLGDCXXXXXXXXXXXXXXXXXNVALCPFEAIKV 146
              K  GYG QGGCRFGLYEYFK+LYS VL +                  ++ALCPFEAIKV
Sbjct:    78 GKLLGYGVQGGCRFGLYEYFKTLYSDVLPNHNRTSIYFLSSASAQIFADMALCPFEAIKV 137

Query:   147 QVQAQPHFAKGLADGIPKLYASEGIFGFYRGLIPLLGRNLPY 188
             +VQ QP FAKGL DG P++Y SEG+ GF+RGL PL  RNLP+
Sbjct:   138 RVQTQPMFAKGLLDGFPRVYRSEGLAGFHRGLFPLWCRNLPF 179




GO:0005739 "mitochondrion" evidence=ISM
GO:0005743 "mitochondrial inner membrane" evidence=ISS
GO:0006810 "transport" evidence=ISS
GO:0009651 "response to salt stress" evidence=IMP
UNIPROTKB|O80413 O80413 "Mitochondrial phosphate transporter" [Zea mays (taxid:4577)] Back     alignment and assigned GO terms
TAIR|locus:2174688 PHT3;1 "phosphate transporter 3;1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2099413 PHT3;2 "phosphate transporter 3;2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
FB|FBgn0034497 CG9090 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|F8VVM2 SLC25A3 "Phosphate carrier protein, mitochondrial" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:1353498 Slc25a3 "solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|G3V741 Slc25a3 "Phosphate carrier protein, mitochondrial" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|P12234 SLC25A3 "Phosphate carrier protein, mitochondrial" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1PXY4 SLC25A3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query202
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 8e-19
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 5e-11
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 8e-08
PTZ00168259 PTZ00168, PTZ00168, mitochondrial carrier protein; 1e-04
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
 Score = 76.9 bits (190), Expect = 8e-19
 Identities = 24/93 (25%), Positives = 34/93 (36%), Gaps = 4/93 (4%)

Query: 26  HYSICAIGGMLSAGTAHLAITPLDVVKVNMQ----VHPIKYSSIASCYTNLLKEQGASAF 81
            +    + G ++   A     PLDVVK  +Q        KY  I  C+  + KE+G    
Sbjct: 4   SFLASLLAGGIAGAIAATVTYPLDVVKTRLQSSAAGGSRKYKGILDCFKKIYKEEGIRGL 63

Query: 82  WRGSAAKFFGYGAQGGCRFGLYEYFKSLYSSVL 114
           ++G               FG YE  K L    L
Sbjct: 64  YKGLLPNLLRVAPAAAIYFGTYETLKKLLLKKL 96


Length = 96

>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 202
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
KOG0764 299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0752 320 consensus Mitochondrial solute carrier protein [En 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0760 302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0758 297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0757 319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
KOG0754 294 consensus Mitochondrial oxodicarboxylate carrier p 100.0
KOG0759 286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
KOG0762 311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0753 317 consensus Mitochondrial fatty acid anion carrier p 100.0
KOG0761 361 consensus Mitochondrial carrier protein CGI-69 [En 100.0
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 100.0
KOG0770 353 consensus Predicted mitochondrial carrier protein 100.0
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 100.0
KOG0766 297 consensus Predicted mitochondrial carrier protein 99.98
KOG0750304 consensus Mitochondrial solute carrier protein [En 99.97
KOG0767 333 consensus Mitochondrial phosphate carrier protein 99.97
KOG0765333 consensus Predicted mitochondrial carrier protein 99.97
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 99.97
KOG0036463 consensus Predicted mitochondrial carrier protein 99.97
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 99.96
KOG0769 308 consensus Predicted mitochondrial carrier protein 99.96
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 99.96
KOG0766297 consensus Predicted mitochondrial carrier protein 99.96
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 99.96
KOG0036463 consensus Predicted mitochondrial carrier protein 99.96
KOG0768 323 consensus Mitochondrial carrier protein PET8 [Ener 99.96
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 99.96
KOG0770353 consensus Predicted mitochondrial carrier protein 99.94
KOG0755 320 consensus Mitochondrial oxaloacetate carrier prote 99.94
KOG0750 304 consensus Mitochondrial solute carrier protein [En 99.94
KOG0765 333 consensus Predicted mitochondrial carrier protein 99.94
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 99.94
KOG0756 299 consensus Mitochondrial tricarboxylate/dicarboxyla 99.93
KOG0767333 consensus Mitochondrial phosphate carrier protein 99.93
KOG0769308 consensus Predicted mitochondrial carrier protein 99.91
KOG1519297 consensus Predicted mitochondrial carrier protein 99.83
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.8
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.79
KOG2745321 consensus Mitochondrial carrier protein [General f 99.75
KOG1519297 consensus Predicted mitochondrial carrier protein 99.66
KOG2745321 consensus Mitochondrial carrier protein [General f 99.45
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 99.38
KOG2954427 consensus Mitochondrial carrier protein [General f 99.36
KOG2954427 consensus Mitochondrial carrier protein [General f 98.72
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
Probab=100.00  E-value=1.3e-41  Score=268.21  Aligned_cols=178  Identities=23%  Similarity=0.397  Sum_probs=162.7

Q ss_pred             cchhHHHHHHHHHHHHHHHHhhchHHHHHHHHhcCCC--CCCCHHHHHHHHHHhhchhhhccCchHhHHHHHhhhhhHHh
Q 028901           24 KGHYSICAIGGMLSAGTAHLAITPLDVVKVNMQVHPI--KYSSIASCYTNLLKEQGASAFWRGSAAKFFGYGAQGGCRFG  101 (202)
Q Consensus        24 ~~~~~~~~~ag~~a~~~~~~i~~Ple~ik~~~Q~~~~--~~~~~~~~~~~i~~~~g~~~ly~G~~~~~~~~~~~~~~~~~  101 (202)
                      ......+++||++||.++.+++||+|++|+|+-++..  .|+++.+++++|+++||++|||||+.|++++.+|+.++.|.
T Consensus       123 ~~~~~~~l~aGalAG~~a~~~tyPLDlvRtRLa~q~~~~~y~~l~~a~~~I~~~eGi~gfYrGl~ptllgi~Pyag~~F~  202 (320)
T KOG0752|consen  123 SLSPLVRLVAGALAGMTATLATYPLDLLRTRLAVQGELKVYRGLLHAFKTIYREEGIRGFYRGLGPTLLGIAPYAGINFF  202 (320)
T ss_pred             ccchhHHHHHHHHHHHHHHHhcCcHHHhhhheeeecccccCCcHHHHHHHHHHhcchhhhhcCcchhhheehhhhhhHHH
Confidence            4567899999999999999999999999999988876  49999999999999999999999999999999999999999


Q ss_pred             HHHHHHH-HHhhhcC-CCCchHHHHHHHhHHHHHHhhhcCCHHHHHHHHHhCC-------CCCCCHHHHHHHHHHhhChh
Q 028901          102 LYEYFKS-LYSSVLG-DCSRSSVFFLSSASAEVFANVALCPFEAIKVQVQAQP-------HFAKGLADGIPKLYASEGIF  172 (202)
Q Consensus       102 ~~~~~~~-~~~~~~~-~~~~~~~~~~~g~~a~~~~~~i~~P~d~iktr~q~~~-------~~~~~~~~~~~~i~~~~G~~  172 (202)
                      +||.+|+ ....... ++.+.+..++||.+||+++..+++|+|+||.|||+..       ..+.++++|+++|+++||++
T Consensus       203 ~Yd~lk~~~~~~~~~~~~~~~~~~l~~GalAG~~aqti~yPlD~vRrrmQ~~~~~~~~~~~~~~~~~~~~~~i~~~EG~~  282 (320)
T KOG0752|consen  203 AYDTLKKWQYLKSSGNKELSNFERLLCGALAGAVAQTITYPLDTVRRRMQLGGLKYFGGGFRYKGVLDAFRQIVKTEGVK  282 (320)
T ss_pred             HHHHHHHhhcccccccchhhhHHHHHHHHHHHHHHhhhcccHHHHHHHHhccCccccccccccccHHHHHHHHHHHhhhh
Confidence            9999999 4443322 3446678899999999999999999999999999985       23468999999999999999


Q ss_pred             hhhcchHHhhhhhcccchhhhhhhhhhcc
Q 028901          173 GFYRGLIPLLGRNLPYIERYLRCFPFVNV  201 (202)
Q Consensus       173 gl~rG~~~~~~~~~~~~~~~f~~ye~~k~  201 (202)
                      |||||+.+++++.+|+.++.|.+||.+|+
T Consensus       283 gLYkGl~p~~lK~~P~~ai~F~~Ye~~k~  311 (320)
T KOG0752|consen  283 GLYKGLSPNLLKVVPSVAISFTTYEILKD  311 (320)
T ss_pred             hhhccccHHHHHhcccceeeeehHHHHHH
Confidence            99999999999999999999999999985



>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query202
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 6e-05
2lck_A 303 Structure Of The Mitochondrial Uncoupling Protein 2 6e-04
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure

Iteration: 1

Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 41/169 (24%), Positives = 68/169 (40%), Gaps = 26/169 (15%) Query: 32 IGGMLSAGTAHLAITPLDVVKVNMQVH--------PIKYSSIASCYTNLLKEQGASAFWR 83 + G ++A + A+ P++ VK+ +QV +Y I C + KEQG +FWR Sbjct: 12 LAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWR 71 Query: 84 GSAAKFFGYGAQGGCRFGLYEYFKSLYSSVLGDCXXXXXXXXXXXXXXXXXNVA----LC 139 G+ A Y F + +K ++ LG A LC Sbjct: 72 GNLANVIRYFPTQALNFAFKDKYKQIF---LGGVDRHKQFWRYFAGNLASGGAAGATSLC 128 Query: 140 ---PFEAIKVQV-------QAQPHFAKGLADGIPKLYASEGIFGFYRGL 178 P + + ++ AQ F GL + I K++ S+G+ G Y+G Sbjct: 129 FVYPLDFARTRLAADVGKGAAQREFT-GLGNCITKIFKSDGLRGLYQGF 176
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query202
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 1e-25
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 1e-21
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 3e-08
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 3e-07
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 2e-22
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 5e-16
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 5e-10
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 1e-04
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
 Score = 99.7 bits (249), Expect = 1e-25
 Identities = 36/170 (21%), Positives = 63/170 (37%), Gaps = 17/170 (10%)

Query: 32  IGGMLSAGTAHLAITPLDVVKVNMQVH-----------PIKYSSIASCYTNLLKEQGASA 80
           +G   +A  A L   PLD  KV +Q+              +Y  +      +++ +G  +
Sbjct: 6   LGAGTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPRS 65

Query: 81  FWRGSAAKFFGYGAQGGCRFGLYEYFKSLYSSVLGDCSRSSVFFLSSASAEVFANVALCP 140
            + G  A      +    R GLY+  K  Y+             L+ ++    A     P
Sbjct: 66  LYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKGSEHAG-IGSRLLAGSTTGALAVAVAQP 124

Query: 141 FEAIKVQVQAQPHFA-----KGLADGIPKLYASEGIFGFYRGLIPLLGRN 185
            + +KV+ QAQ         +   +    +   EGI G ++G  P + RN
Sbjct: 125 TDVVKVRFQAQARAGGGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARN 174


>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query202
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 100.0
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
Probab=100.00  E-value=5.8e-41  Score=268.90  Aligned_cols=178  Identities=17%  Similarity=0.254  Sum_probs=165.0

Q ss_pred             chhHHHHHHHHHHHHHHHHhhchHHHHHHHHhcCCC-----CCCCHHHHHHHHHHhhchhhhccCchHhHHHHHhhhhhH
Q 028901           25 GHYSICAIGGMLSAGTAHLAITPLDVVKVNMQVHPI-----KYSSIASCYTNLLKEQGASAFWRGSAAKFFGYGAQGGCR   99 (202)
Q Consensus        25 ~~~~~~~~ag~~a~~~~~~i~~Ple~ik~~~Q~~~~-----~~~~~~~~~~~i~~~~g~~~ly~G~~~~~~~~~~~~~~~   99 (202)
                      ......+++|++||+++.++++|+|+||+|+|++..     .|++.++++++|+++||++|||||+.|.+++.+++.+++
T Consensus       102 ~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~i~  181 (303)
T 2lck_A          102 AGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCAE  181 (303)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHSCSCCCSSSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHHHHHHHHcCcHHHHHHHHhcccccCCCCCCCCHHHHHHHHHHhcChhhhhCCccHHHHHHHHHHHHH
Confidence            456788999999999999999999999999999763     689999999999999999999999999999999999999


Q ss_pred             HhHHHHHHHHHhhhcCCCCchHHHHHHHhHHHHHHhhhcCCHHHHHHHHHhCC-CCCCCHHHHHHHHHHhhChhhhhcch
Q 028901          100 FGLYEYFKSLYSSVLGDCSRSSVFFLSSASAEVFANVALCPFEAIKVQVQAQP-HFAKGLADGIPKLYASEGIFGFYRGL  178 (202)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~i~~P~d~iktr~q~~~-~~~~~~~~~~~~i~~~~G~~gl~rG~  178 (202)
                      |.+||.+|+.+.+......+....+++|++||++++++++|+|+||+|+|++. ..|.++++|+++++++||++|||||+
T Consensus       182 f~~ye~~k~~l~~~~~~~~~~~~~~~~g~~ag~~~~~~~~P~dvvktrlq~~~~~~y~~~~~~~~~i~~~eG~~glyrG~  261 (303)
T 2lck_A          182 LVTYDLIKDTLLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSALGQYHSAGHCALTMLRKEGPRAFYKGF  261 (303)
T ss_dssp             HHHHHHHHHTTTTTTSCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSSCCSHHHHHHHHHHSSCTHHHHSCC
T ss_pred             HHHHHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHHHcCHHHHHHHHHHhccccccCCHHHHHHHHHHHcChHHhhccH
Confidence            99999999988754434556678899999999999999999999999999985 46899999999999999999999999


Q ss_pred             HHhhhhhcccchhhhhhhhhhccC
Q 028901          179 IPLLGRNLPYIERYLRCFPFVNVF  202 (202)
Q Consensus       179 ~~~~~~~~~~~~~~f~~ye~~k~~  202 (202)
                      .++++|.+|+++++|.+||.+|++
T Consensus       262 ~~~~~r~~p~~~i~f~~ye~~k~~  285 (303)
T 2lck_A          262 MPSFLRLGSWNVVMFVTYEQLKRA  285 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHhHHHHHHHHHHHHHHH
Confidence            999999999999999999999874



>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 202
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 3e-10
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 1e-09
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
 Score = 56.3 bits (134), Expect = 3e-10
 Identities = 39/189 (20%), Positives = 75/189 (39%), Gaps = 18/189 (9%)

Query: 32  IGGMLSAGTAHLAITPLDVVKVNMQVH--------PIKYSSIASCYTNLLKEQGASAFWR 83
           + G ++A  +  A+ P++ VK+ +QV           +Y  I  C   + KEQG  +FWR
Sbjct: 11  LAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWR 70

Query: 84  GSAAKFFGYGAQGGCRFGLYEYFKSLYSSVLGDCSRSSVFFL----SSASAEVFANVALC 139
           G+ A    Y       F   + +K ++   +    +   +F     S  +A   +   + 
Sbjct: 71  GNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVY 130

Query: 140 PFEAIKVQVQAQPHFAK------GLADGIPKLYASEGIFGFYRGLIPLLGRNLPYIERYL 193
           P +  + ++ A            GL + I K++ S+G+ G Y+G    +   + Y   Y 
Sbjct: 131 PLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYF 190

Query: 194 RCFPFVNVF 202
             +      
Sbjct: 191 GVYDTAKGM 199


>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query202
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=100.00  E-value=6.3e-35  Score=230.32  Aligned_cols=179  Identities=21%  Similarity=0.376  Sum_probs=162.2

Q ss_pred             cchhHHHHHHHHHHHHHHHHhhchHHHHHHHHhcCC--------CCCCCHHHHHHHHHHhhchhhhccCchHhHHHHHhh
Q 028901           24 KGHYSICAIGGMLSAGTAHLAITPLDVVKVNMQVHP--------IKYSSIASCYTNLLKEQGASAFWRGSAAKFFGYGAQ   95 (202)
Q Consensus        24 ~~~~~~~~~ag~~a~~~~~~i~~Ple~ik~~~Q~~~--------~~~~~~~~~~~~i~~~~g~~~ly~G~~~~~~~~~~~   95 (202)
                      +..+++.++||++||+++.+++||||+||+|+|++.        ..+++.++++++++++||+++||+|+.+.+++..++
T Consensus         3 ~~~~~~~~laG~~a~~i~~~~~~Pld~iK~r~Q~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~~   82 (292)
T d1okca_           3 ALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPT   82 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhhhhhhhhccchhhhhhhcc
Confidence            457889999999999999999999999999999963        357899999999999999999999999999999999


Q ss_pred             hhhHHhHHHHHHHHHhhhcCCCCc----hHHHHHHHhHHHHHHhhhcCCHHHHHHHHHhCC------CCCCCHHHHHHHH
Q 028901           96 GGCRFGLYEYFKSLYSSVLGDCSR----SSVFFLSSASAEVFANVALCPFEAIKVQVQAQP------HFAKGLADGIPKL  165 (202)
Q Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~g~~a~~~~~~i~~P~d~iktr~q~~~------~~~~~~~~~~~~i  165 (202)
                      ..++|.+|+.+++.+........+    ....+.+|.+|++++.++++|+|++|+|+|.+.      ..|.+..++++++
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~~~~~~~~~~~~~~~~~~~~~~~~  162 (292)
T d1okca_          83 QALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKI  162 (292)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTCSCSSHHHHHHHH
T ss_pred             cchhHHHHHHHHHHHhcccccccccchhhhhhhhhhhhhhhhHHhhhhhhhhhheeeeccccccccccccccHHHHHHHh
Confidence            999999999999998765533332    345678999999999999999999999999983      3578899999999


Q ss_pred             HHhhChhhhhcchHHhhhhhcccchhhhhhhhhhccC
Q 028901          166 YASEGIFGFYRGLIPLLGRNLPYIERYLRCFPFVNVF  202 (202)
Q Consensus       166 ~~~~G~~gl~rG~~~~~~~~~~~~~~~f~~ye~~k~~  202 (202)
                      +++||+++||+|+.+++++.+|+++++|..||.+|++
T Consensus       163 ~~~~G~~~l~~G~~~~~~~~~~~~~~~~~~~~~~k~~  199 (292)
T d1okca_         163 FKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGM  199 (292)
T ss_dssp             HHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             hhccchhhhhccccccccceehHhhhhhhhccchhhh
Confidence            9999999999999999999999999999999998863



>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure