Citrus Sinensis ID: 029092

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------20
Protein Sequence
MLKSIVAGSCSVPLRLESKDNLNAGACFSDTTRSASVACCSSSSRTNAYNVPKLEPFSRTKLERAVKEPSLIEKSENDLADYCSTLEGDDSYSCWRAYFELKDLEKELPKEDIEKLILQSGGVKSLIGCLHGISSIRKAKTDGFASEEKTLGSKRIESSSRPVPDGLPKTLEELEEEERARMPDSPYTRLLRAKGRLPA
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccEEEEcccccccccccccccccHHHHHHHHcccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHcccccHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
cccEEEcccccccEEEccccccccccccccccccccEEEEccccccccccccccccccHHHHHHHHccccHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHcccccccccHHccccccccccccccccHHHHHHHHHccccccHHHHHHHHcccccc
Coil and Loop (DISEMBL)
mlksivagscsvplrleskdnlnagacfsdttrsasvaccssssrtnaynvpklepfsrtkleravkepslieksENDLADYcstlegddsysCWRAYFELKDLEKELPKEDIEKLILQSGGVKSLIGCLHGISSIRkaktdgfaseektlgskriesssrpvpdglpkTLEELEEEerarmpdspytRLLRAKGRLPA
Flexible Loop (DISEMBL)
MLKSIVAGSCSVPLRLESKDNLNAGACFSDTTRSASVACCssssrtnaynvpklepfsrtkleravkepslieksendLADYCSTLEGDDSYSCWRAYFELKDLEKELPKEDIEKLILQSGGVKSLIGCLHGISSirkaktdgfASEEktlgskriesssrpvpdglpkTLEELeeeerarmpdspytrllrakgrlpa
Low Complexity Region (SEG)
MLKSIVAGSCSVPLRLESKDNLNAGACFSDTTRsasvaccssssRTNAYNVPKLEPFSRTKLERAVKEPSLIEKSENDLADYCSTLEGDDSYSCWRAYFelkdlekelpkedieklilQSGGVKSLIGCLHGISSIRKAKTDGFASEEKTLGSKRIESSSRPVPDGLPKTleeleeeeRARMPDSPYTRLLRAKGRLPA
Disordered region (IsUnstruct)
************************GACF**************************************************LADYCSTLEGDDSYSCWRAYFELKDLEKELPKEDIEKLILQSGGVKSLIGCLHGISSIR**************************************************************
Disordered Region (DISOPRED)
*********CS**LRLESKD**********************************************K***LIEKSENDLADYCSTLEGDDSYSCWRAYFELKDLEKELPKEDIEKLILQSGGVKSLIGCLHG******************************************************YTRLLRAK*****
Disordered Region (DISEMBL)
MLKSIVAGSCSVPLRLESKDNLNAGACFSDTTRSASVACCSSSSRTNAYNVPKLEPFSRTKLERAVKEPSLIEKSENDLADYCSTLEGDDSYSCWRAYFELKDLEKELPKEDIEKLILQSGGVKSLIGCLHGISSIRKAKTD**********************DGLPKTLEEL*********DSPYTRLLRAKGRLPA
Disordered Region (DISPRO)
*LKSIVAGSCSVPLRLESK*************************RTNAYNVPKLEPFSRTKLERAVKEPSLIEKSENDLADYCSTLEGDDSYSCWRAYFELKDLEKELPKEDIEKLILQSGGVKSLIGCLHGISSIRKAK*********************PVPDGLPKTL*ELEEEERA*****P*****RAK*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLKSIVAGSCSVPLRLESKDNLNAGACFSDTTRSASVACCSSSSRTNAYNVPKLEPFSRTKLERAVKEPSLIEKSENDLADYCSTLEGDDSYSCWRAYFELKDLEKELPKEDIEKLILQSGGVKSLIGCLHGISSIRKAKTDGFASEEKTLGSKRIESSSRPVPDGLPKTLEELEEEERARMPDSPYTRLLRAKGRLPA
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	199
255556231	326	conserved hypothetical protein [Ricinus	0.984	0.601	0.648	7e-63
224103497	204	predicted protein [Populus trichocarpa]	0.964	0.941	0.62	3e-60
351720857	200	uncharacterized protein LOC100305614 [Gl	0.944	0.94	0.603	1e-54
225428657	194	PREDICTED: uncharacterized protein LOC10	0.829	0.850	0.636	6e-54
351728107	200	uncharacterized protein LOC100527613 [Gl	0.949	0.945	0.582	5e-53
449471271	209	PREDICTED: uncharacterized protein LOC10	0.738	0.703	0.671	8e-49
188572010	235	unknown protein [Ophiopogon japonicus]	0.824	0.697	0.564	7e-48
357475533	196	hypothetical protein MTR_4g087160 [Medic	0.829	0.841	0.577	3e-45
449455220	215	PREDICTED: uncharacterized protein LOC10	0.738	0.683	0.632	3e-45
388501824	196	unknown [Medicago truncatula]	0.839	0.852	0.570	3e-45

>gi|255556231|ref|XP_002519150.1| conserved hypothetical protein [Ricinus communis] gi|223541813|gb|EEF43361.1| conserved hypothetical protein [Ricinus communis]

 Score =  245 bits (625), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 129/199 (64%), Positives = 151/199 (75%), Gaps = 3/199 (1%)

Query: 1   MLKSIVAGSCSVPLRLESKDNLNAGACFSDTTRSASVACCSSSSRTNAYNVPKLEPFSRT 60
           MLKSI+  S S PL  E +   N+  C    +   S +  SSSS  ++  +PKLEPFSRT
Sbjct: 120 MLKSILLQSPSSPLLFEHR---NSKTCTRIVSTITSSSSSSSSSSRSSSYIPKLEPFSRT 176

Query: 61  KLERAVKEPSLIEKSENDLADYCSTLEGDDSYSCWRAYFELKDLEKELPKEDIEKLILQS 120
           KLERAVK P LIEKSEN+LADYCSTL+GDDSYSCWRAYFELKDLE+E PKED+EKLILQ+
Sbjct: 177 KLERAVKAPPLIEKSENELADYCSTLDGDDSYSCWRAYFELKDLERESPKEDVEKLILQA 236

Query: 121 GGVKSLIGCLHGISSIRKAKTDGFASEEKTLGSKRIESSSRPVPDGLPKTLEELEEEERA 180
           GGVKSLIGCLHGISS+ K + +GF      L  ++ +    P+PDGLPK+ EEL+EEERA
Sbjct: 237 GGVKSLIGCLHGISSMHKGRKNGFGFMAPMLAVEKEKERPCPIPDGLPKSQEELDEEERA 296

Query: 181 RMPDSPYTRLLRAKGRLPA 199
           RMPDSPYTRLLR KGR PA
Sbjct: 297 RMPDSPYTRLLRTKGRFPA 315

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224103497|ref|XP_002313079.1| predicted protein [Populus trichocarpa] gi|118483253|gb|ABK93529.1| unknown [Populus trichocarpa] gi|222849487|gb|EEE87034.1| predicted protein [Populus trichocarpa]

 Score =  236 bits (603), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 124/200 (62%), Positives = 149/200 (74%), Gaps = 8/200 (4%)

Query: 1   MLKSIVAGSCSVPLRLESKD-NLNAGACFSDTTRSASVACCSSSSRTNAYNVPKLEPFSR 59
           M+KS++  S   PL +E++D N ++    S T        CSSS   +A N+PKL+PFSR
Sbjct: 1   MIKSLLLRSFPSPLLIEARDVNRSSKRVVSSTI------TCSSSRSDDALNIPKLDPFSR 54

Query: 60  TKLERAVKEPSLIEKSENDLADYCSTLEGDDSYSCWRAYFELKDLEKELPKEDIEKLILQ 119
           TK+ERAVK   LI+KSEN+LADYCSTLEGDDSYSCWRAYFELKDLE+E PKED+ +LI+Q
Sbjct: 55  TKIERAVKSLPLIQKSENELADYCSTLEGDDSYSCWRAYFELKDLERESPKEDVVRLIIQ 114

Query: 120 SGGVKSLIGCLHGISSIRKAKTDGFASEEKTLGSKRIESSSRPVPDGLPKTLEELEEEER 179
           SGGVKSLIGCLHGISS+ K K   F+        K  E    P+PDGLPK+L+ELEEEER
Sbjct: 115 SGGVKSLIGCLHGISSMNKGKKKAFSMAAPPNVMKERERLC-PIPDGLPKSLQELEEEER 173

Query: 180 ARMPDSPYTRLLRAKGRLPA 199
           ARMPDSP+TR+LR KGR PA
Sbjct: 174 ARMPDSPFTRMLRTKGRFPA 193

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351720857|ref|NP_001237958.1| uncharacterized protein LOC100305614 [Glycine max] gi|255626091|gb|ACU13390.1| unknown [Glycine max]

 Score =  218 bits (555), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 120/199 (60%), Positives = 143/199 (71%), Gaps = 11/199 (5%)

Query: 2   LKSIVAGSCSVPLRLESKDNLNAGACFSDTTRSAS-VACCSSSSRTNAYNVPKLEPFSRT 60
           +K+ +   CS PL L++  N       S T R AS V CCSS    N   +PKLEPFSRT
Sbjct: 1   MKATLLRPCSGPLILDTHSNRT-----SSTMRHASTVVCCSSK---NQPYIPKLEPFSRT 52

Query: 61  KLERAVKEPSLIEKSENDLADYCSTLEGDDSYSCWRAYFELKDLEKELPKEDIEKLILQS 120
           K ERAVK+P LIEKSE ++ DYCSTLEGD SYSCW+AYFELKDLEKE P+ DIE+LIL++
Sbjct: 53  KFERAVKDPPLIEKSEKEILDYCSTLEGDQSYSCWQAYFELKDLEKESPRADIERLILET 112

Query: 121 GGVKSLIGCLHGISSIRKAKTDGFASEEKTLGSKRIESSSRPVPDGLPKTLEELEEEERA 180
           GGVKSLIGCLHGIS + K K  G  +  K + S+  E    P+PDGLPK+ +EL EEE+A
Sbjct: 113 GGVKSLIGCLHGISIMHKVKK-GDMNLSKDVKSEEGERMC-PIPDGLPKSADELREEEQA 170

Query: 181 RMPDSPYTRLLRAKGRLPA 199
           RMPDSPYT+LLR  GR PA
Sbjct: 171 RMPDSPYTKLLRTMGRHPA 189

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225428657|ref|XP_002284884.1| PREDICTED: uncharacterized protein LOC100267586 [Vitis vinifera] gi|297741365|emb|CBI32496.3| unnamed protein product [Vitis vinifera]

 Score =  215 bits (548), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 107/168 (63%), Positives = 128/168 (76%), Gaps = 3/168 (1%)

Query: 32  TRSASVACCSSSSRTNAYNVPKLEPFSRTKLERAVKEPSLIEKSENDLADYCSTLEGDDS 91
           +RS++V C   SSR +   +PKLEPFSR+KL+R +KEP LI+K EN+L DYCSTLEGDDS
Sbjct: 19  SRSSTVCC---SSRNSQPYIPKLEPFSRSKLDRVLKEPPLIQKCENELMDYCSTLEGDDS 75

Query: 92  YSCWRAYFELKDLEKELPKEDIEKLILQSGGVKSLIGCLHGISSIRKAKTDGFASEEKTL 151
           YSCW+AYFELKDLEKE PKED+EKLILQ GG+KSLIGCLH +++  K K  G  S +   
Sbjct: 76  YSCWQAYFELKDLEKESPKEDVEKLILQVGGLKSLIGCLHHVATFSKGKKAGIGSVKAVN 135

Query: 152 GSKRIESSSRPVPDGLPKTLEELEEEERARMPDSPYTRLLRAKGRLPA 199
             K       PVPDGLPK+ EELEEE++ RMPDS +TRLLR KGR PA
Sbjct: 136 TEKEEGGRPFPVPDGLPKSQEELEEEDKGRMPDSAFTRLLRTKGRFPA 183

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351728107|ref|NP_001238719.1| uncharacterized protein LOC100527613 [Glycine max] gi|255632776|gb|ACU16741.1| unknown [Glycine max]

 Score =  213 bits (541), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 116/199 (58%), Positives = 142/199 (71%), Gaps = 10/199 (5%)

Query: 1   MLKSIVAGSCSVPLRLESKDNLNAGACFSDTTRSASVACCSSSSRTNAYNVPKLEPFSRT 60
           M  +++    S PL L++  N  +      T  +++V CCSS  R   Y +PKLEPFSRT
Sbjct: 1   MKATLLCPCSSAPLILDTHSNRTSA-----TRHASTVVCCSS--RNQPY-IPKLEPFSRT 52

Query: 61  KLERAVKEPSLIEKSENDLADYCSTLEGDDSYSCWRAYFELKDLEKELPKEDIEKLILQS 120
           K ERAVK+P LIEKSE ++ DYCSTLEGD SYSCW+AYFELKDLEKE PK DIE+LIL++
Sbjct: 53  KFERAVKDPPLIEKSEREILDYCSTLEGDQSYSCWQAYFELKDLEKESPKADIERLILET 112

Query: 121 GGVKSLIGCLHGISSIRKAKTDGFASEEKTLGSKRIESSSRPVPDGLPKTLEELEEEERA 180
           G VKSLIGCLHGIS + K K  G  +  K + S+  E    P+PDGLPK+ +EL EEE+A
Sbjct: 113 GSVKSLIGCLHGISIMHKLKK-GDMNLSKDVKSEEGERLC-PIPDGLPKSADELREEEQA 170

Query: 181 RMPDSPYTRLLRAKGRLPA 199
           RMPDSPYT+LLR  GR PA
Sbjct: 171 RMPDSPYTKLLRTMGRHPA 189

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449471271|ref|XP_004153261.1| PREDICTED: uncharacterized protein LOC101222441 [Cucumis sativus]

 Score =  198 bits (504), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 102/152 (67%), Positives = 127/152 (83%), Gaps = 5/152 (3%)

Query: 51  VPKLEPFSRTKLERAVKEPSLIEKSENDLADYCSTLEGDDSYSCWRAYFELKDLEKELPK 110
           +PKL+PFSR+KL+RA+KEP LI+KSEN+LADYCSTLEGDDSYSCW+AYFEL+DLEKE PK
Sbjct: 49  IPKLQPFSRSKLDRAIKEPPLIQKSENELADYCSTLEGDDSYSCWKAYFELQDLEKESPK 108

Query: 111 EDIEKLILQSGGVKSLIGCLHGISSIRKAKTDGFASEEKTLGSKRIESSSR---PVPDGL 167
           +++EKLILQ+GGVKSLIGC+HGI++I+K+K  G   EE+    K +E       P+PDGL
Sbjct: 109 QEVEKLILQAGGVKSLIGCVHGITAIQKSK--GKEKEERKAWKKEVEGRGNRECPIPDGL 166

Query: 168 PKTLEELEEEERARMPDSPYTRLLRAKGRLPA 199
           PK+ EE+EEEE  RMPDS +TRLLR+KG  PA
Sbjct: 167 PKSAEEIEEEEEGRMPDSAFTRLLRSKGTFPA 198

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|188572010|gb|ACD64979.1| unknown protein [Ophiopogon japonicus]

 Score =  195 bits (496), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 100/177 (56%), Positives = 129/177 (72%), Gaps = 13/177 (7%)

Query: 28  FSDTTRSASVACCSSSSRTNAYNVPKLEPFSRTKLERAVKEPSLIEKSENDLADYCSTLE 87
           F D  RS S     ++ R++A ++PKLEPFSR++++R ++EPS ++K ENDL +YCS LE
Sbjct: 22  FVDVGRSRSARFVCNAQRSSA-SIPKLEPFSRSRIDRRMQEPSFLKKCENDLTEYCSILE 80

Query: 88  GDDSYSCWRAYFELKDLEKELPKEDIEKLILQSGGVKSLIGCLHGISSI-----RKAKTD 142
           GD+SYSCWRAYFELKDLEKE+PK+D+EK + Q+GG KSLI CLHG++++      K K  
Sbjct: 81  GDESYSCWRAYFELKDLEKEMPKDDVEKFVRQTGGRKSLIECLHGLTALEKKAKNKQKRA 140

Query: 143 GFASEEKTLGSKRIESSSRPVPDGLPKTLEELEEEERARMPDSPYTRLLRAKGRLPA 199
              +EE+     R       VPDGLPKT E LEEEERARMPDSP+TRLLR+ GR PA
Sbjct: 141 AVIAEEERHEPPR-------VPDGLPKTREVLEEEERARMPDSPFTRLLRSMGRHPA 190

Source: Ophiopogon japonicus

Species: Ophiopogon japonicus

Genus: Ophiopogon

Family: Asparagaceae

Order: Asparagales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357475533|ref|XP_003608052.1| hypothetical protein MTR_4g087160 [Medicago truncatula] gi|355509107|gb|AES90249.1| hypothetical protein MTR_4g087160 [Medicago truncatula]

 Score =  186 bits (473), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 97/168 (57%), Positives = 126/168 (75%), Gaps = 3/168 (1%)

Query: 32  TRSASVACCSSSSRTNAYNVPKLEPFSRTKLERAVKEPSLIEKSENDLADYCSTLEGDDS 91
           T S  + C SSSSR  ++ +PKL+PFSRTKL+R  K+  LIEKSE DL DYCS LEGD+S
Sbjct: 21  TSSTKLICSSSSSRNQSF-IPKLQPFSRTKLDRLAKDLPLIEKSEKDLLDYCSILEGDES 79

Query: 92  YSCWRAYFELKDLEKELPKEDIEKLILQSGGVKSLIGCLHGISSIRKAKTDGFASEEKTL 151
           YSCW+AYFELKDL+KE P+ +IE+LI++ GGVKSLIGCLHGI+ +RK K +      +  
Sbjct: 80  YSCWQAYFELKDLQKESPRAEIERLIIEIGGVKSLIGCLHGIALMRKLKKNDLNLTNEIY 139

Query: 152 GSKRIESSSRPVPDGLPKTLEELEEEERARMPDSPYTRLLRAKGRLPA 199
             +  E +  P PDGLPK+ +E+ EEE+A+MPDS YT+LLR+ G+ PA
Sbjct: 140 SEE--EQNPCPRPDGLPKSADEMMEEEQAKMPDSSYTKLLRSMGKSPA 185

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449455220|ref|XP_004145351.1| PREDICTED: uncharacterized protein LOC101213926 [Cucumis sativus]

 Score =  186 bits (473), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 100/158 (63%), Positives = 124/158 (78%), Gaps = 11/158 (6%)

Query: 51  VPKLEPFSRTKLERAVKEPSLIEKSENDL------ADYCSTLEGDDSYSCWRAYFELKDL 104
           +PKL+PFSR+KL+RA+KEP LI+KSEN         DYCSTLEGDDSYSCW+AYFEL+DL
Sbjct: 49  IPKLQPFSRSKLDRAIKEPPLIQKSENYYYYYFCSCDYCSTLEGDDSYSCWKAYFELQDL 108

Query: 105 EKELPKEDIEKLILQSGGVKSLIGCLHGISSIRKAKTDGFASEEKTLGSKRIESSSR--- 161
           EKE PK+++EKLILQ+GGVKSLIGC+HGI++I+K+K  G   EE+    K +E       
Sbjct: 109 EKESPKQEVEKLILQAGGVKSLIGCVHGITAIQKSK--GKEKEERKAWKKEVEGRGNREC 166

Query: 162 PVPDGLPKTLEELEEEERARMPDSPYTRLLRAKGRLPA 199
           P+PDGLPK+ EE+EEEE  RMPDS +TRLLR+KG  PA
Sbjct: 167 PIPDGLPKSAEEIEEEEEGRMPDSAFTRLLRSKGTFPA 204

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388501824|gb|AFK38978.1| unknown [Medicago truncatula]

 Score =  186 bits (473), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 97/170 (57%), Positives = 127/170 (74%), Gaps = 3/170 (1%)

Query: 30  DTTRSASVACCSSSSRTNAYNVPKLEPFSRTKLERAVKEPSLIEKSENDLADYCSTLEGD 89
           + T S  + C SSSSR  ++ +PKL+PFSRTKL+R  K+  LIEKSE DL DYCS LEGD
Sbjct: 19  NPTSSTKLICSSSSSRNQSF-IPKLQPFSRTKLDRLAKDLPLIEKSEKDLLDYCSILEGD 77

Query: 90  DSYSCWRAYFELKDLEKELPKEDIEKLILQSGGVKSLIGCLHGISSIRKAKTDGFASEEK 149
           +SYSCW+AYFELKDL+KE P+ +IE+LI++ GGVKSLIGCLHGI+ +RK K +      +
Sbjct: 78  ESYSCWQAYFELKDLQKESPRAEIERLIIEIGGVKSLIGCLHGIALMRKLKKNDLNLTNE 137

Query: 150 TLGSKRIESSSRPVPDGLPKTLEELEEEERARMPDSPYTRLLRAKGRLPA 199
               +  E +  P PDGLPK+ +E+ EEE+A+MPDS YT+LLR+ G+ PA
Sbjct: 138 IYSEE--EQNPCPRPDGLPKSADEMMEEEQAKMPDSSYTKLLRSMGKSPA 185

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	199
TAIR|locus:2044556	203	MEE14 "AT2G15890" [Arabidopsis	0.748	0.733	0.486	1.4e-32

TAIR|locus:2044556 MEE14 "AT2G15890" [Arabidopsis thaliana (taxid:3702)]

 Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
 Identities = 74/152 (48%), Positives = 100/152 (65%)

Query:    50 NVPKLEPFSRTKLERAVKEPSLIEKSENDLADYCSTLEGDDSYSCWRAYFXXXXXXXXXX 109
             +VPKLE FSR K +R +++P LIEK+E++L+DYCSTLEGDDSYSCWRAYF          
Sbjct:    42 DVPKLELFSRGKFDRILQDPPLIEKAESELSDYCSTLEGDDSYSCWRAYFELKDLEREKP 101

Query:   110 XXXXXXXXXQSGGVKSLIGCLHGISSIRKA-KT-DGFASEEKTLGSKRIESSSRPVPDGL 167
                      Q+GG+KSLIGCLHG++S+ K  KT +G    E++   K +      +PDGL
Sbjct:   102 KVEVENLILQTGGLKSLIGCLHGVASMEKDNKTKNGLHVGEESDREKGMNLHIH-IPDGL 160

Query:   168 PKTXXXXXXXXRARMPDSPYTRLLRAKGRLPA 199
             PK+        +++MPDS +TRLLR+KG +PA
Sbjct:   161 PKSEQELEEEEKSKMPDSAFTRLLRSKGTIPA 192


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.314   0.130   0.380    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      199       161   0.00074  107 3  11 23  0.42    32
                                                     30  0.44    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  571 (61 KB)
  Total size of DFA:  134 KB (2084 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.77u 0.14s 12.91t   Elapsed:  00:00:01
  Total cpu time:  12.77u 0.14s 12.91t   Elapsed:  00:00:01
  Start:  Fri May 10 05:37:36 2013   End:  Fri May 10 05:37:37 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0009793 "embryo development ending in seed dormancy" evidence=IMP

GO:0009507 "chloroplast" evidence=IDA

GO:0050832 "defense response to fungus" evidence=IEP

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00090586 SubName- Full=Putative uncharacterized protein; (204 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	199
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.3 bits (101), Expect = 2e-05
 Identities = 37/246 (15%), Positives = 69/246 (28%), Gaps = 88/246 (35%)

Query: 31  TTRSASVA-CCSSSSRTNAYNVPKLEPFSRTKLE---------RAVKEP----------- 69
           TTR   V    S+++ T+          +  +++         R    P           
Sbjct: 271 TTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRL 330

Query: 70  SLIEKSENDLADYCSTLEGDDSYSCW------------------RAYFE----------- 100
           S+I +S   + D  +T +     +C                   R  F+           
Sbjct: 331 SIIAES---IRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHI 387

Query: 101 ----LKDLEKELPKEDIEKLILQSGGVKSLIGC--------LHGISSIRKAKTDGFASEE 148
               L  +  ++ K D+  +++      SL+          +  I    K K +     E
Sbjct: 388 PTILLSLIWFDVIKSDVM-VVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLE----NE 442

Query: 149 KTLGSKRIESSSRPV---PDGLPKT-------------LEELEEEERARMPDSPYT--RL 190
             L    ++  + P     D L                L+ +E  ER  +    +   R 
Sbjct: 443 YALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRF 502

Query: 191 LRAKGR 196
           L  K R
Sbjct: 503 LEQKIR 508

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 39.5 bits (91), Expect = 5e-04
 Identities = 22/166 (13%), Positives = 53/166 (31%), Gaps = 39/166 (23%)

Query: 56  PFSRTKLERAVKEPSLIEKSENDLADYCSTLEGDDS----YSCWRA--YFELKDLEKELP 109
            F  + ++   ++PS++ +   +       L  D+     Y+  R   Y +L+    EL 
Sbjct: 92  KFLMSPIKTEQRQPSMMTRMYIE---QRDRLYNDNQVFAKYNVSRLQPYLKLRQALLEL- 147

Query: 110 KEDIEKLILQS-GGV-KSLIGCL------------------HGISSIRKAKTDGFASEEK 149
               + +++    G  K+    +                    ++       +      +
Sbjct: 148 -RPAKNVLIDGVLGSGKT---WVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQ 203

Query: 150 TLGSKRIESSSRPVPDG---LPKTLEELEEEERARMPDSPYTR-LL 191
            L   +I+ +     D    +   +  ++ E R  +   PY   LL
Sbjct: 204 KL-LYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLL 248

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00