Citrus Sinensis ID: 029118
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
No hits with e-value below 0.001 by BLAST
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 198 | ||||||
| 224073720 | 306 | predicted protein [Populus trichocarpa] | 0.939 | 0.607 | 0.719 | 8e-70 | |
| 225442154 | 303 | PREDICTED: uncharacterized protein LOC10 | 0.929 | 0.607 | 0.675 | 1e-63 | |
| 255560651 | 302 | conserved hypothetical protein [Ricinus | 0.959 | 0.629 | 0.668 | 1e-61 | |
| 356561047 | 312 | PREDICTED: uncharacterized protein LOC10 | 0.924 | 0.586 | 0.647 | 4e-60 | |
| 356522384 | 316 | PREDICTED: uncharacterized protein LOC10 | 0.924 | 0.579 | 0.624 | 2e-59 | |
| 79378061 | 312 | Rossmann-fold NAD(P)-binding domain-cont | 0.974 | 0.618 | 0.587 | 5e-57 | |
| 297842009 | 311 | hypothetical protein ARALYDRAFT_476397 [ | 0.959 | 0.610 | 0.566 | 6e-54 | |
| 51969936 | 311 | unnamed protein product [Arabidopsis tha | 0.979 | 0.623 | 0.572 | 1e-53 | |
| 79321173 | 311 | Rossmann-fold NAD(P)-binding domain-cont | 0.979 | 0.623 | 0.572 | 1e-53 | |
| 37991868 | 310 | expressed protein [Oryza sativa Japonica | 0.808 | 0.516 | 0.644 | 5e-52 |
| >gi|224073720|ref|XP_002304142.1| predicted protein [Populus trichocarpa] gi|222841574|gb|EEE79121.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 268 bits (685), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 141/196 (71%), Positives = 159/196 (81%), Gaps = 10/196 (5%)
Query: 4 TAFPSTLVIQTSHISFTSQKKSFELANPSSLIFNFEKKVLFRCSAKKKISFVDQILDYIE 63
TA PST QTS +F SQ ++ +PS LIF + L RCSAKKKISFVDQILDYIE
Sbjct: 3 TALPSTAFCQTS-FTFPSQNPC-KVKSPS-LIFRTKSHGLIRCSAKKKISFVDQILDYIE 59
Query: 64 GGPKLRKWYGAPDLLPKDGSNEEDEEKEDEFP----EEARDAVLVTDGDSDIGQMVILSL 119
GGPKLRKWYGAPDLLPKDGS+ EDE DE P E RDAVLVTDGDS+IGQM+ILSL
Sbjct: 60 GGPKLRKWYGAPDLLPKDGSDTEDE---DELPGNALNEVRDAVLVTDGDSEIGQMIILSL 116
Query: 120 IVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFISNAG 179
IVK+ R+KALVKDKR AME+FGTYVESMAGDAS+K FLK ALRGVR+IICP+EGF+SN G
Sbjct: 117 IVKKARVKALVKDKRTAMEAFGTYVESMAGDASSKPFLKKALRGVRAIICPNEGFLSNGG 176
Query: 180 SLKGVQHVILLSQGAV 195
L+GV+HVILLSQ +V
Sbjct: 177 DLQGVKHVILLSQLSV 192
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225442154|ref|XP_002274144.1| PREDICTED: uncharacterized protein LOC100246327 [Vitis vinifera] gi|297743019|emb|CBI35886.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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Score = 247 bits (631), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 131/194 (67%), Positives = 150/194 (77%), Gaps = 10/194 (5%)
Query: 1 MAGTAFPSTLVIQTSHIS-FTSQKKSFELANPSSLIFNFEKK-VLFRCSAKKKISFVDQI 58
MAG P H S F S + S + SS +F ++ L CSAKKK FVDQI
Sbjct: 1 MAGYLLPY-------HTSLFLSSQNSHRITATSSFLFKIDRPGSLVCCSAKKKAGFVDQI 53
Query: 59 LDYIEGGPKLRKWYGAPDLLPKDGSNEEDEEKEDEFPEEARDAVLVTDGDSDIGQMVILS 118
LDYIEGGPKLRKWYGAPDLLPKDGS+ E++++ E EE RDAVLVTDGDS+IGQMVILS
Sbjct: 54 LDYIEGGPKLRKWYGAPDLLPKDGSSVEEDDESAEV-EEDRDAVLVTDGDSEIGQMVILS 112
Query: 119 LIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFISNA 178
LIVKR+RIKALVKDKR AME+FGTYVESMAGDA++K F + ALRGVR+IICP+EG ISN
Sbjct: 113 LIVKRSRIKALVKDKRAAMEAFGTYVESMAGDANDKSFQRKALRGVRTIICPNEGSISNF 172
Query: 179 GSLKGVQHVILLSQ 192
GSL GVQH+ILLSQ
Sbjct: 173 GSLMGVQHIILLSQ 186
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255560651|ref|XP_002521339.1| conserved hypothetical protein [Ricinus communis] gi|223539417|gb|EEF41007.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 131/196 (66%), Positives = 156/196 (79%), Gaps = 6/196 (3%)
Query: 1 MAGTAFPSTLVIQTS-HISFTSQKKSFELANPSSLIFNFEKKVLFRCSAKKKISFVDQIL 59
MAGT F S L+ Q+ +S+ +Q KS + S + + L CSAKKKI F+DQIL
Sbjct: 1 MAGT-FSSILLWQSCLSLSYQNQSKSLDF---SPIFHTTNNRSLVHCSAKKKIGFMDQIL 56
Query: 60 DYIEGGPKLRKWYGAPDLLPKDGSNEEDEEKEDEFPEEARDAVLVTDGDSDIGQMVILSL 119
DYIEGGPKLRKWYGAPDLLPKDGS +DE++ E EE RDA+LVTDGDS+IGQMVILSL
Sbjct: 57 DYIEGGPKLRKWYGAPDLLPKDGSTMQDEDEFSE-EEEVRDAILVTDGDSEIGQMVILSL 115
Query: 120 IVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFISNAG 179
IVKR ++KALVKDKR+AME+FGTYVESMAGD S+ F+K ALRGVR+IICP EGF+S+ G
Sbjct: 116 IVKRAKVKALVKDKRSAMEAFGTYVESMAGDTSSMLFIKKALRGVRAIICPKEGFLSSVG 175
Query: 180 SLKGVQHVILLSQGAV 195
SLKGV+HVILLSQ +V
Sbjct: 176 SLKGVKHVILLSQLSV 191
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356561047|ref|XP_003548797.1| PREDICTED: uncharacterized protein LOC100806043 [Glycine max] | Back alignment and taxonomy information |
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Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 125/193 (64%), Positives = 152/193 (78%), Gaps = 10/193 (5%)
Query: 8 STLVIQTSHISFTSQKKSFELANPSSLIFNFEKKV----LFRCSAKKKISFVDQILDYIE 63
STL Q S + TSQ+ A SS FN E L C AKKK+SF++QILDYIE
Sbjct: 11 STLPFQKS-VPLTSQRSG--TAFGSSFQFNRENGTVVTPLVVCHAKKKLSFMEQILDYIE 67
Query: 64 GGPKLRKWYGAPDLLPKDGSNEEDEEKEDEFPE-EARDAVLVTDGDSDIGQMVILSLIVK 122
GGPKLRKWYGAPD+L KDG+ ED ED++PE E RDAVLVTDGDS++GQMVILSLIVK
Sbjct: 68 GGPKLRKWYGAPDILEKDGTAIED--NEDDYPEDEVRDAVLVTDGDSEMGQMVILSLIVK 125
Query: 123 RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFISNAGSLK 182
+ R+K LVKDKR A+E+FG+YVESMAGD S+K+F+K ALRGVR+IICP+EGF+S+ GSL+
Sbjct: 126 KARVKTLVKDKRVALEAFGSYVESMAGDTSDKRFVKKALRGVRTIICPNEGFLSSVGSLQ 185
Query: 183 GVQHVILLSQGAV 195
GVQHVI+LS+ +V
Sbjct: 186 GVQHVIVLSRLSV 198
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Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356522384|ref|XP_003529826.1| PREDICTED: uncharacterized protein LOC100801216 [Glycine max] | Back alignment and taxonomy information |
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Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 123/197 (62%), Positives = 151/197 (76%), Gaps = 14/197 (7%)
Query: 8 STLVIQTSHISFTSQKKSFELANPSSLIFNFEK----KVLFRCSAKKKISFVDQILDYIE 63
STL Q S + SQ+ SS +F+ E L C AKKK+SF++QILDYIE
Sbjct: 11 STLSFQKS-VPLNSQRSGTSFG--SSFLFSRENGSVVPSLVVCHAKKKLSFMEQILDYIE 67
Query: 64 GGPKLRKWYGAPDLLPKDGSNEEDEEKEDEFP-----EEARDAVLVTDGDSDIGQMVILS 118
GGPKLRKWYGAPD+L KDG+ ED+E D++P +E RDAVLVTDGDS+ GQMVILS
Sbjct: 68 GGPKLRKWYGAPDILEKDGTAIEDDE--DDYPGEQIEDEVRDAVLVTDGDSETGQMVILS 125
Query: 119 LIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFISNA 178
LIVK+ R+K LVKDKR A+E+FG+YVESMAGD S+K+FLK ALRGVR+IICP+EGF+S+
Sbjct: 126 LIVKKARVKTLVKDKRVALEAFGSYVESMAGDTSDKRFLKKALRGVRTIICPNEGFLSSV 185
Query: 179 GSLKGVQHVILLSQGAV 195
GSL+GVQHVI+LSQ +V
Sbjct: 186 GSLQGVQHVIVLSQLSV 202
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Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|79378061|ref|NP_177408.3| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|44917555|gb|AAS49102.1| At1g72640 [Arabidopsis thaliana] gi|332197230|gb|AEE35351.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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Score = 226 bits (575), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 118/201 (58%), Positives = 146/201 (72%), Gaps = 8/201 (3%)
Query: 1 MAGTAFPSTLVIQTSHISFTSQKKSFELANPSSLIFNFEKKVLFRCSAKKKISFVDQILD 60
MAGT+ PS L+ Q + F+S + E AN + K+ L RC AKKKISFVDQILD
Sbjct: 1 MAGTSLPSCLLSQGPSLLFSSSNQDSE-ANKCRIGITSGKRCLVRCFAKKKISFVDQILD 59
Query: 61 YIEGGPKLRKWYGAPDLLPKDGSNEED------EEKEDEFPEEARDAVLVTDGDSDIGQM 114
YIEGGPKLRKWYGAP+L PKDGS D EEKED+ E +D V VTDGDSD+GQM
Sbjct: 60 YIEGGPKLRKWYGAPELRPKDGSLSGDDDEFEAEEKEDDLDGE-KDVVFVTDGDSDLGQM 118
Query: 115 VILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF 174
+IL LIVK TR+KALVKDKR A+E+FG+YVE GDAS+++FLK A +GV ++I P+EGF
Sbjct: 119 IILQLIVKGTRVKALVKDKRKALEAFGSYVELTTGDASDERFLKKAFKGVGAVISPTEGF 178
Query: 175 ISNAGSLKGVQHVILLSQGAV 195
+S S +GV+H +LLSQ +V
Sbjct: 179 LSIVKSFRGVKHAVLLSQLSV 199
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Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297842009|ref|XP_002888886.1| hypothetical protein ARALYDRAFT_476397 [Arabidopsis lyrata subsp. lyrata] gi|297334727|gb|EFH65145.1| hypothetical protein ARALYDRAFT_476397 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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Score = 215 bits (548), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 115/203 (56%), Positives = 144/203 (70%), Gaps = 13/203 (6%)
Query: 1 MAGTAFPSTLVIQTSHISFTSQKKSFELANPSSLIFNFEKKVLFRCSAKKKISFVDQILD 60
MAGT+ PS L+ Q + F S + E + + K+ RC AKKKISFVDQILD
Sbjct: 1 MAGTSLPSCLLSQGPSLLFCSSNQVSE--TKCRIGISSGKRCRVRCLAKKKISFVDQILD 58
Query: 61 YIEGGPKLRKWYGAPDLLPKDGSNEEDEEKEDEF-PEEARD-------AVLVTDGDSDIG 112
YIEGGPKLRKWYGAP+L PKDGS D+ DEF EEA+D V VTDGDSD+G
Sbjct: 59 YIEGGPKLRKWYGAPELRPKDGSLSGDD---DEFEAEEAKDDLDGENDVVFVTDGDSDLG 115
Query: 113 QMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172
QM+IL LIVK TR+KALVKDKR A+E+FG+YVE +GDAS+++FLK A +GV ++I P+E
Sbjct: 116 QMIILQLIVKGTRVKALVKDKRKALEAFGSYVELTSGDASDERFLKKAFKGVGAVISPTE 175
Query: 173 GFISNAGSLKGVQHVILLSQGAV 195
GF+ N S +GV+H +LLSQ +V
Sbjct: 176 GFLPNVKSFRGVKHAVLLSQLSV 198
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Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|51969936|dbj|BAD43660.1| unnamed protein product [Arabidopsis thaliana] | Back alignment and taxonomy information |
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Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 114/199 (57%), Positives = 148/199 (74%), Gaps = 5/199 (2%)
Query: 1 MAGTAFPSTLVIQTSHISFTSQKKSFELANPSSLIFNFEKKVLFRCSAKKKISFVDQILD 60
MAGT+ PS L+ Q + F+S + E AN + K+ L RC AKKKISFVDQILD
Sbjct: 1 MAGTSLPSCLLSQGPSLLFSSSNQDSE-ANKCRIGITSGKRCLVRCFAKKKISFVDQILD 59
Query: 61 YIEGGPKLRKWYGAPDLLPKDGS----NEEDEEKEDEFPEEARDAVLVTDGDSDIGQMVI 116
YIEGGPKLRKWYGAP+L PKDGS ++E EE++++ + +D V VTDGDSD+GQM+I
Sbjct: 60 YIEGGPKLRKWYGAPELRPKDGSLSGDDDEFEEEKEDDLDGEKDVVFVTDGDSDLGQMII 119
Query: 117 LSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFIS 176
L LIVK TR+KALVKDKR A+E+FG+YVE GDAS+++FLK A +GV ++I P+EGF+S
Sbjct: 120 LQLIVKGTRVKALVKDKRKALEAFGSYVELTTGDASDERFLKKAFKGVGAVISPTEGFLS 179
Query: 177 NAGSLKGVQHVILLSQGAV 195
S +GV+H +LLSQ +V
Sbjct: 180 IVKSFRGVKHAVLLSQLSV 198
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Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|79321173|ref|NP_001031269.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|332197231|gb|AEE35352.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 114/199 (57%), Positives = 148/199 (74%), Gaps = 5/199 (2%)
Query: 1 MAGTAFPSTLVIQTSHISFTSQKKSFELANPSSLIFNFEKKVLFRCSAKKKISFVDQILD 60
MAGT+ PS L+ Q + F+S + E AN + K+ L RC AKKKISFVDQILD
Sbjct: 1 MAGTSLPSCLLSQGPSLLFSSSNQDSE-ANKCRIGITSGKRCLVRCFAKKKISFVDQILD 59
Query: 61 YIEGGPKLRKWYGAPDLLPKDGS----NEEDEEKEDEFPEEARDAVLVTDGDSDIGQMVI 116
YIEGGPKLRKWYGAP+L PKDGS ++E EE++++ + +D V VTDGDSD+GQM+I
Sbjct: 60 YIEGGPKLRKWYGAPELRPKDGSLSGDDDEFEEEKEDDLDGEKDVVFVTDGDSDLGQMII 119
Query: 117 LSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFIS 176
L LIVK TR+KALVKDKR A+E+FG+YVE GDAS+++FLK A +GV ++I P+EGF+S
Sbjct: 120 LQLIVKGTRVKALVKDKRKALEAFGSYVELTTGDASDERFLKKAFKGVGAVISPTEGFLS 179
Query: 177 NAGSLKGVQHVILLSQGAV 195
S +GV+H +LLSQ +V
Sbjct: 180 IVKSFRGVKHAVLLSQLSV 198
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Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|37991868|gb|AAR06314.1| expressed protein [Oryza sativa Japonica Group] gi|108708765|gb|ABF96560.1| expressed protein [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
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Score = 209 bits (532), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 105/163 (64%), Positives = 129/163 (79%), Gaps = 3/163 (1%)
Query: 35 IFNFEKKVLFRCSAKKKISFVDQILDYIEGGPKLRKWYGAPDLLPKDGSNEEDEEKEDEF 94
+FN V+ R +K + SF D+ILDYIEGGPKLR+WYGAPDLLPKDGS E+ E++ E
Sbjct: 38 LFNAATAVVVRSRSKDEASFTDRILDYIEGGPKLRRWYGAPDLLPKDGSAEDGEDEPSEI 97
Query: 95 P-EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN 153
EE RDAVLVT+GDS+IGQMVILSLI+KR RIKALVKD+R+ E+FGTYVE M G+ +
Sbjct: 98 DIEEPRDAVLVTNGDSEIGQMVILSLILKRARIKALVKDRRSTEEAFGTYVECMVGNMED 157
Query: 154 KKFLKTALRGVRSIICPS-EGFISNAGSLKGVQHVILLSQGAV 195
K F K ALRGVR+IICP+ +GF S+ LKGVQH++LLSQ +V
Sbjct: 158 KSFTKKALRGVRAIICPADDGFFSDL-DLKGVQHIVLLSQLSV 199
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Source: Oryza sativa Japonica Group Species: Oryza sativa Genus: Oryza Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 198 | ||||||
| TAIR|locus:2030270 | 312 | AT1G72640 [Arabidopsis thalian | 0.979 | 0.621 | 0.555 | 5.1e-51 |
| TAIR|locus:2030270 AT1G72640 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 530 (191.6 bits), Expect = 5.1e-51, P = 5.1e-51
Identities = 111/200 (55%), Positives = 139/200 (69%)
Query: 1 MAGTAFPSTLVIQTSHISFTSQKKSFELANPSSLIFNFEKKVLFRCSAKKKISFVDQILD 60
MAGT+ PS L+ Q + F+S + E AN + K+ L RC AKKKISFVDQILD
Sbjct: 1 MAGTSLPSCLLSQGPSLLFSSSNQDSE-ANKCRIGITSGKRCLVRCFAKKKISFVDQILD 59
Query: 61 YIEGGPKLRKWYGAPDLLPKDGS-----NXXXXXXXXXXXXXARDAVLVTDGDSDIGQMV 115
YIEGGPKLRKWYGAP+L PKDGS + +D V VTDGDSD+GQM+
Sbjct: 60 YIEGGPKLRKWYGAPELRPKDGSLSGDDDEFEAEEKEDDLDGEKDVVFVTDGDSDLGQMI 119
Query: 116 ILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFI 175
IL LIVK TR+KALVKDKR A+E+FG+YVE GDAS+++FLK A +GV ++I P+EGF+
Sbjct: 120 ILQLIVKGTRVKALVKDKRKALEAFGSYVELTTGDASDERFLKKAFKGVGAVISPTEGFL 179
Query: 176 SNAGSLKGVQHVILLSQGAV 195
S S +GV+H +LLSQ +V
Sbjct: 180 SIVKSFRGVKHAVLLSQLSV 199
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.381 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 198 185 0.00080 110 3 11 22 0.42 32
31 0.41 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1
No. of states in DFA: 585 (62 KB)
Total size of DFA: 134 KB (2084 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.32u 0.10s 14.42t Elapsed: 00:00:01
Total cpu time: 14.32u 0.10s 14.42t Elapsed: 00:00:01
Start: Fri May 10 06:31:14 2013 End: Fri May 10 06:31:15 2013
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | gw1.III.2689.1 | hypothetical protein (262 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 198 | |||
| cd09811 | 354 | cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD | 0.003 |
| >gnl|CDD|187671 cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD (hydroxysteroid dehydrogenase) and HSD3B1(delta 5-delta 4-isomerase)-like, extended (e) SDRs | Back alignment and domain information |
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Score = 37.1 bits (86), Expect = 0.003
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 9/75 (12%)
Query: 103 LVTDGDSDIGQMVILSLIVKRTRIKAL-VKDK---RNAMESFG-----TYVESMAGDASN 153
LVT G +GQ +I L+ ++ +K + V DK +E F TYV + GD +
Sbjct: 3 LVTGGGGFLGQHIIRLLLERKEELKEIRVLDKAFGPELIEHFEKSQGKTYVTDIEGDIKD 62
Query: 154 KKFLKTALRGVRSII 168
FL A +GV +I
Sbjct: 63 LSFLFRACQGVSVVI 77
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This extended-SDR subgroup includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7], and related proteins. These proteins have the characteristic active site tetrad and NAD(P)-binding motif of extended SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. C(27) 3beta-HSD is a membrane-bound enzyme of the endoplasmic reticulum, it catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 354 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 198 | |||
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.84 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 99.83 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.82 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 99.81 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.77 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 99.77 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 99.77 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 99.76 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.75 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 99.74 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.74 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.74 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.72 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 99.72 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.71 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.71 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.71 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 99.7 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.7 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.7 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.69 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.69 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 99.68 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 99.67 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.67 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 99.66 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.65 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.65 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.64 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 99.64 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.64 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.62 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 99.62 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.62 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.62 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.61 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 99.61 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 99.6 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.58 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.58 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.58 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 99.58 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.57 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.56 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 99.56 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 99.54 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.54 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 99.53 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 99.51 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.51 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.51 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 99.5 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.49 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.49 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.49 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.49 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.48 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.48 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 99.48 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.45 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.45 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.45 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.45 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.44 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.44 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.44 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.42 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.42 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.41 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 99.41 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 99.41 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.41 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.39 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 99.39 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 99.39 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 99.39 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 99.38 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 99.38 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.38 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.38 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.38 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 99.37 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.37 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.37 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 99.37 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.36 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.36 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.36 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.36 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.36 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 99.35 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 99.34 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 99.34 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 99.34 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 99.33 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 99.33 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 99.33 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 99.33 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.32 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 99.32 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.32 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 99.32 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.32 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 99.32 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 99.31 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 99.31 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 99.31 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 99.3 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 99.3 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 99.3 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.29 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 99.28 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 99.28 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 99.28 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 99.28 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.28 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 99.28 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 99.28 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.28 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.28 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 99.27 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 99.26 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 99.26 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 99.26 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.26 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.26 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 99.26 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 99.26 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 99.25 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.25 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 99.25 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.25 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 99.25 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 99.24 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 99.24 | |
| KOG1203 | 411 | consensus Predicted dehydrogenase [Carbohydrate tr | 99.24 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 99.24 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 99.24 | |
| PRK05717 | 255 | oxidoreductase; Validated | 99.23 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 99.23 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 99.23 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 99.23 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 99.23 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 99.23 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.22 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 99.22 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 99.22 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 99.21 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 99.21 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 99.2 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.2 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 99.2 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 99.19 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 99.19 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 99.19 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.19 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 99.19 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 99.18 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 99.18 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 99.18 | |
| PRK08643 | 256 | acetoin reductase; Validated | 99.17 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 99.17 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 99.17 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 99.16 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 99.16 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 99.15 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 99.15 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 99.15 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.15 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 99.14 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 99.14 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.14 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.13 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 99.13 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 99.13 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 99.13 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 99.12 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 99.12 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 99.12 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 99.12 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 99.12 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 99.12 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 99.12 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 99.11 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 99.11 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 99.11 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 99.11 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 99.11 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 99.11 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.1 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.1 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 99.1 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 99.1 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 99.1 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 99.1 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 99.09 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 99.09 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 99.08 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.07 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 99.07 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.07 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 99.07 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 99.07 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.06 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 99.05 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.04 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 99.03 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 99.03 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.02 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 99.02 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 99.02 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.01 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 99.0 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 99.0 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 98.99 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 98.99 | |
| KOG4039 | 238 | consensus Serine/threonine kinase TIP30/CC3 [Signa | 98.99 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 98.99 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 98.98 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 98.97 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 98.97 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 98.96 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 98.96 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 98.96 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.95 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 98.95 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 98.94 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 98.93 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 98.92 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 98.92 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 98.91 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 98.9 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 98.89 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.89 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 98.87 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 98.85 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 98.84 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 98.84 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 98.84 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 98.83 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 98.83 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 98.82 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 98.8 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 98.8 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.8 | |
| PLN00015 | 308 | protochlorophyllide reductase | 98.8 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 98.79 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 98.79 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 98.77 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 98.77 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 98.75 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 98.7 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 98.69 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 98.69 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 98.68 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 98.63 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 98.62 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 98.61 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 98.58 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 98.54 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.51 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 98.49 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 98.48 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 98.46 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.43 | |
| PRK14874 | 334 | aspartate-semialdehyde dehydrogenase; Provisional | 98.4 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 98.39 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 98.38 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.37 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 98.36 | |
| PLN00106 | 323 | malate dehydrogenase | 98.34 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 98.34 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.32 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 98.31 | |
| PLN02968 | 381 | Probable N-acetyl-gamma-glutamyl-phosphate reducta | 98.3 | |
| PRK09620 | 229 | hypothetical protein; Provisional | 98.25 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 98.24 | |
| PRK06732 | 229 | phosphopantothenate--cysteine ligase; Validated | 98.22 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.22 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 98.21 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.21 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.14 | |
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 98.13 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 98.13 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.12 | |
| PRK05671 | 336 | aspartate-semialdehyde dehydrogenase; Reviewed | 98.1 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 98.09 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 98.06 | |
| KOG4288 | 283 | consensus Predicted oxidoreductase [General functi | 98.06 | |
| TIGR01296 | 339 | asd_B aspartate-semialdehyde dehydrogenase (peptid | 98.06 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.05 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 98.05 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 98.04 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.03 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.02 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 98.01 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 97.98 | |
| PF01118 | 121 | Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi | 97.93 | |
| PRK10669 | 558 | putative cation:proton antiport protein; Provision | 97.9 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 97.86 | |
| PRK00436 | 343 | argC N-acetyl-gamma-glutamyl-phosphate reductase; | 97.86 | |
| PRK03659 | 601 | glutathione-regulated potassium-efflux system prot | 97.86 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 97.85 | |
| TIGR01850 | 346 | argC N-acetyl-gamma-glutamyl-phosphate reductase, | 97.84 | |
| KOG1210 | 331 | consensus Predicted 3-ketosphinganine reductase [S | 97.78 | |
| KOG2733 | 423 | consensus Uncharacterized membrane protein [Functi | 97.76 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 97.72 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 97.71 | |
| PLN02383 | 344 | aspartate semialdehyde dehydrogenase | 97.69 | |
| PRK08664 | 349 | aspartate-semialdehyde dehydrogenase; Reviewed | 97.69 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 97.69 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 97.62 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 97.57 | |
| PRK06129 | 308 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 97.57 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 97.56 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 97.55 | |
| PRK00048 | 257 | dihydrodipicolinate reductase; Provisional | 97.46 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 97.44 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 97.43 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 97.42 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 97.4 | |
| cd00704 | 323 | MDH Malate dehydrogenase. Malate dehydrogenase (MD | 97.39 | |
| PRK03562 | 621 | glutathione-regulated potassium-efflux system prot | 97.39 | |
| COG3268 | 382 | Uncharacterized conserved protein [Function unknow | 97.38 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 97.37 | |
| TIGR00978 | 341 | asd_EA aspartate-semialdehyde dehydrogenase (non-p | 97.31 | |
| KOG1611 | 249 | consensus Predicted short chain-type dehydrogenase | 97.19 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 97.19 | |
| PRK10537 | 393 | voltage-gated potassium channel; Provisional | 97.17 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 97.17 | |
| TIGR01915 | 219 | npdG NADPH-dependent F420 reductase. This model re | 97.17 | |
| TIGR01758 | 324 | MDH_euk_cyt malate dehydrogenase, NAD-dependent. T | 97.16 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 97.14 | |
| KOG1014 | 312 | consensus 17 beta-hydroxysteroid dehydrogenase typ | 97.12 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 97.11 | |
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 97.1 | |
| PRK08057 | 248 | cobalt-precorrin-6x reductase; Reviewed | 97.09 | |
| cd08259 | 332 | Zn_ADH5 Alcohol dehydrogenases of the MDR family. | 97.09 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.08 | |
| PRK06019 | 372 | phosphoribosylaminoimidazole carboxylase ATPase su | 97.01 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 96.98 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 96.98 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 96.94 | |
| PF03446 | 163 | NAD_binding_2: NAD binding domain of 6-phosphogluc | 96.91 | |
| PRK06728 | 347 | aspartate-semialdehyde dehydrogenase; Provisional | 96.89 | |
| PRK06598 | 369 | aspartate-semialdehyde dehydrogenase; Reviewed | 96.88 | |
| TIGR00521 | 390 | coaBC_dfp phosphopantothenoylcysteine decarboxylas | 96.86 | |
| PF04127 | 185 | DFP: DNA / pantothenate metabolism flavoprotein; I | 96.84 | |
| PRK09288 | 395 | purT phosphoribosylglycinamide formyltransferase 2 | 96.81 | |
| COG2085 | 211 | Predicted dinucleotide-binding enzymes [General fu | 96.77 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 96.77 | |
| PF00056 | 141 | Ldh_1_N: lactate/malate dehydrogenase, NAD binding | 96.69 | |
| KOG4169 | 261 | consensus 15-hydroxyprostaglandin dehydrogenase an | 96.68 | |
| TIGR01019 | 286 | sucCoAalpha succinyl-CoA synthetase, alpha subunit | 96.67 | |
| TIGR02114 | 227 | coaB_strep phosphopantothenate--cysteine ligase, s | 96.67 | |
| PF02571 | 249 | CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: | 96.66 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 96.61 | |
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 96.58 | |
| cd08266 | 342 | Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam | 96.58 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 96.56 | |
| cd08294 | 329 | leukotriene_B4_DH_like 13-PGR is a bifunctional en | 96.55 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 96.55 | |
| PRK11199 | 374 | tyrA bifunctional chorismate mutase/prephenate deh | 96.53 | |
| PF13380 | 116 | CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5 | 96.52 | |
| TIGR01142 | 380 | purT phosphoribosylglycinamide formyltransferase 2 | 96.52 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 96.5 | |
| cd01075 | 200 | NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l | 96.49 | |
| PLN02948 | 577 | phosphoribosylaminoimidazole carboxylase | 96.45 | |
| PRK11863 | 313 | N-acetyl-gamma-glutamyl-phosphate reductase; Provi | 96.45 | |
| PRK08040 | 336 | putative semialdehyde dehydrogenase; Provisional | 96.45 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 96.43 | |
| PRK08655 | 437 | prephenate dehydrogenase; Provisional | 96.42 | |
| cd08250 | 329 | Mgc45594_like Mgc45594 gene product and other MDR | 96.36 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 96.36 | |
| cd05294 | 309 | LDH-like_MDH_nadp A lactate dehydrogenases-like st | 96.36 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 96.36 | |
| TIGR02825 | 325 | B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 | 96.35 | |
| PRK02472 | 447 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.35 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 96.34 | |
| PRK00094 | 325 | gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr | 96.33 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 96.33 | |
| cd08230 | 355 | glucose_DH Glucose dehydrogenase. Glucose dehydrog | 96.28 | |
| PF13241 | 103 | NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_ | 96.25 | |
| PRK05678 | 291 | succinyl-CoA synthetase subunit alpha; Validated | 96.24 | |
| TIGR01851 | 310 | argC_other N-acetyl-gamma-glutamyl-phosphate reduc | 96.23 | |
| cd08244 | 324 | MDR_enoyl_red Possible enoyl reductase. Member ide | 96.17 | |
| PF03807 | 96 | F420_oxidored: NADP oxidoreductase coenzyme F420-d | 96.17 | |
| TIGR01161 | 352 | purK phosphoribosylaminoimidazole carboxylase, Pur | 96.15 | |
| TIGR00872 | 298 | gnd_rel 6-phosphogluconate dehydrogenase (decarbox | 96.12 | |
| PRK00066 | 315 | ldh L-lactate dehydrogenase; Reviewed | 96.11 | |
| cd08293 | 345 | PTGR2 Prostaglandin reductase. Prostaglandins and | 96.11 | |
| PRK06718 | 202 | precorrin-2 dehydrogenase; Reviewed | 96.1 | |
| PRK06522 | 304 | 2-dehydropantoate 2-reductase; Reviewed | 96.1 | |
| COG0136 | 334 | Asd Aspartate-semialdehyde dehydrogenase [Amino ac | 96.07 | |
| PF00899 | 135 | ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a | 96.06 | |
| PRK05476 | 425 | S-adenosyl-L-homocysteine hydrolase; Provisional | 96.04 | |
| PRK09260 | 288 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.02 | |
| TIGR01470 | 205 | cysG_Nterm siroheme synthase, N-terminal domain. T | 96.01 | |
| PLN03154 | 348 | putative allyl alcohol dehydrogenase; Provisional | 95.99 | |
| PRK07417 | 279 | arogenate dehydrogenase; Reviewed | 95.98 | |
| PRK06849 | 389 | hypothetical protein; Provisional | 95.98 | |
| KOG1478 | 341 | consensus 3-keto sterol reductase [Lipid transport | 95.94 | |
| PRK14619 | 308 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 95.93 | |
| PTZ00187 | 317 | succinyl-CoA synthetase alpha subunit; Provisional | 95.92 | |
| TIGR01745 | 366 | asd_gamma aspartate-semialdehyde dehydrogenase, ga | 95.86 | |
| PRK06719 | 157 | precorrin-2 dehydrogenase; Validated | 95.84 | |
| TIGR03366 | 280 | HpnZ_proposed putative phosphonate catabolism asso | 95.81 | |
| cd05280 | 325 | MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone | 95.81 | |
| cd01485 | 198 | E1-1_like Ubiquitin activating enzyme (E1), repeat | 95.8 | |
| PRK06901 | 322 | aspartate-semialdehyde dehydrogenase; Provisional | 95.8 | |
| cd08239 | 339 | THR_DH_like L-threonine dehydrogenase (TDH)-like. | 95.79 | |
| PRK07066 | 321 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 95.78 | |
| cd05276 | 323 | p53_inducible_oxidoreductase PIG3 p53-inducible qu | 95.78 | |
| PF10727 | 127 | Rossmann-like: Rossmann-like domain; InterPro: IPR | 95.77 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 95.77 | |
| cd08253 | 325 | zeta_crystallin Zeta-crystallin with NADP-dependen | 95.76 | |
| smart00859 | 122 | Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin | 95.76 | |
| TIGR01505 | 291 | tartro_sem_red 2-hydroxy-3-oxopropionate reductase | 95.73 | |
| PRK11559 | 296 | garR tartronate semialdehyde reductase; Provisiona | 95.73 | |
| cd05288 | 329 | PGDH Prostaglandin dehydrogenases. Prostaglandins | 95.72 | |
| PRK11880 | 267 | pyrroline-5-carboxylate reductase; Reviewed | 95.72 | |
| cd08268 | 328 | MDR2 Medium chain dehydrogenases/reductase (MDR)/z | 95.71 | |
| cd05291 | 306 | HicDH_like L-2-hydroxyisocapronate dehydrogenases | 95.71 | |
| TIGR02824 | 325 | quinone_pig3 putative NAD(P)H quinone oxidoreducta | 95.69 | |
| PRK09880 | 343 | L-idonate 5-dehydrogenase; Provisional | 95.63 | |
| PLN00203 | 519 | glutamyl-tRNA reductase | 95.61 | |
| COG0002 | 349 | ArgC Acetylglutamate semialdehyde dehydrogenase [A | 95.6 | |
| cd08245 | 330 | CAD Cinnamyl alcohol dehydrogenases (CAD) and rela | 95.57 | |
| cd01338 | 322 | MDH_choloroplast_like Chloroplast-like malate dehy | 95.56 | |
| TIGR03451 | 358 | mycoS_dep_FDH mycothiol-dependent formaldehyde deh | 95.56 | |
| cd05188 | 271 | MDR Medium chain reductase/dehydrogenase (MDR)/zin | 95.55 | |
| TIGR02717 | 447 | AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP | 95.55 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 95.55 | |
| COG0026 | 375 | PurK Phosphoribosylaminoimidazole carboxylase (NCA | 95.52 | |
| PLN02688 | 266 | pyrroline-5-carboxylate reductase | 95.52 | |
| PRK09599 | 301 | 6-phosphogluconate dehydrogenase-like protein; Rev | 95.47 | |
| PRK14618 | 328 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 95.47 | |
| PLN02740 | 381 | Alcohol dehydrogenase-like | 95.44 | |
| PRK08762 | 376 | molybdopterin biosynthesis protein MoeB; Validated | 95.4 | |
| PRK04308 | 445 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 95.37 | |
| TIGR01759 | 323 | MalateDH-SF1 malate dehydrogenase. This model repr | 95.36 | |
| PRK07877 | 722 | hypothetical protein; Provisional | 95.36 | |
| cd08243 | 320 | quinone_oxidoreductase_like_1 Quinone oxidoreducta | 95.31 | |
| PRK08293 | 287 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 95.3 | |
| PRK15461 | 296 | NADH-dependent gamma-hydroxybutyrate dehydrogenase | 95.25 | |
| PRK15469 | 312 | ghrA bifunctional glyoxylate/hydroxypyruvate reduc | 95.21 | |
| cd01337 | 310 | MDH_glyoxysomal_mitochondrial Glyoxysomal and mito | 95.2 | |
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 95.2 | |
| PRK01438 | 480 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 95.18 | |
| cd08289 | 326 | MDR_yhfp_like Yhfp putative quinone oxidoreductase | 95.17 | |
| cd08281 | 371 | liver_ADH_like1 Zinc-dependent alcohol dehydrogena | 95.17 | |
| PRK13403 | 335 | ketol-acid reductoisomerase; Provisional | 95.16 | |
| PRK07819 | 286 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 95.16 | |
| KOG0023 | 360 | consensus Alcohol dehydrogenase, class V [Secondar | 95.15 | |
| PTZ00075 | 476 | Adenosylhomocysteinase; Provisional | 95.15 | |
| COG2130 | 340 | Putative NADP-dependent oxidoreductases [General f | 95.13 | |
| PRK10754 | 327 | quinone oxidoreductase, NADPH-dependent; Provision | 95.12 | |
| cd08292 | 324 | ETR_like_2 2-enoyl thioester reductase (ETR) like | 95.1 | |
| PRK03369 | 488 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 95.1 | |
| PRK05442 | 326 | malate dehydrogenase; Provisional | 95.1 | |
| cd08301 | 369 | alcohol_DH_plants Plant alcohol dehydrogenase. NAD | 95.08 | |
| PRK04207 | 341 | glyceraldehyde-3-phosphate dehydrogenase; Provisio | 95.08 | |
| PLN02928 | 347 | oxidoreductase family protein | 95.07 | |
| COG0289 | 266 | DapB Dihydrodipicolinate reductase [Amino acid tra | 95.07 | |
| cd05282 | 323 | ETR_like 2-enoyl thioester reductase-like. 2-enoyl | 95.06 | |
| cd01492 | 197 | Aos1_SUMO Ubiquitin activating enzyme (E1) subunit | 95.05 | |
| PRK06444 | 197 | prephenate dehydrogenase; Provisional | 95.05 | |
| PRK07502 | 307 | cyclohexadienyl dehydrogenase; Validated | 95.01 | |
| TIGR02823 | 323 | oxido_YhdH putative quinone oxidoreductase, YhdH/Y | 95.01 | |
| cd00757 | 228 | ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 | 95.0 | |
| TIGR01772 | 312 | MDH_euk_gproteo malate dehydrogenase, NAD-dependen | 94.91 | |
| TIGR02818 | 368 | adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr | 94.83 | |
| PF01262 | 168 | AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal | 94.81 | |
| PRK13243 | 333 | glyoxylate reductase; Reviewed | 94.79 | |
| PRK14194 | 301 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.78 | |
| cd08300 | 368 | alcohol_DH_class_III class III alcohol dehydrogena | 94.78 | |
| PRK06223 | 307 | malate dehydrogenase; Reviewed | 94.77 | |
| PRK07531 | 495 | bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe | 94.76 | |
| PRK06130 | 311 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 94.75 | |
| PRK12921 | 305 | 2-dehydropantoate 2-reductase; Provisional | 94.73 | |
| cd01483 | 143 | E1_enzyme_family Superfamily of activating enzymes | 94.73 | |
| PRK07574 | 385 | formate dehydrogenase; Provisional | 94.72 | |
| TIGR00936 | 406 | ahcY adenosylhomocysteinase. This enzyme hydrolyze | 94.69 | |
| PRK12480 | 330 | D-lactate dehydrogenase; Provisional | 94.66 | |
| cd00650 | 263 | LDH_MDH_like NAD-dependent, lactate dehydrogenase- | 94.66 | |
| TIGR02354 | 200 | thiF_fam2 thiamine biosynthesis protein ThiF, fami | 94.65 | |
| PRK14188 | 296 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.65 | |
| TIGR03201 | 349 | dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co | 94.58 | |
| PRK06545 | 359 | prephenate dehydrogenase; Validated | 94.57 | |
| PRK05597 | 355 | molybdopterin biosynthesis protein MoeB; Validated | 94.57 | |
| PRK12490 | 299 | 6-phosphogluconate dehydrogenase-like protein; Rev | 94.57 | |
| TIGR03026 | 411 | NDP-sugDHase nucleotide sugar dehydrogenase. All o | 94.55 | |
| cd05292 | 308 | LDH_2 A subgroup of L-lactate dehydrogenases. L-la | 94.55 | |
| PRK00141 | 473 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 94.53 | |
| PRK08644 | 212 | thiamine biosynthesis protein ThiF; Provisional | 94.51 | |
| KOG1198 | 347 | consensus Zinc-binding oxidoreductase [Energy prod | 94.49 | |
| PLN03139 | 386 | formate dehydrogenase; Provisional | 94.48 | |
| PTZ00354 | 334 | alcohol dehydrogenase; Provisional | 94.47 | |
| PRK13304 | 265 | L-aspartate dehydrogenase; Reviewed | 94.47 | |
| PRK02705 | 459 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 94.46 |
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.8e-20 Score=163.46 Aligned_cols=96 Identities=22% Similarity=0.280 Sum_probs=83.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC--------
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-------- 171 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a-------- 171 (198)
|+|||||||||||++++++|+++||+|++++|++++.......+++++.+|++|++++.++++|+|+|||+.
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~~~~~~ 80 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKEWGAELVYGDLSLPETLPPSFKGVTAIIDASTSRPSDLY 80 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECCCCCCCCcc
Confidence 579999999999999999999999999999998765433333569999999999999999999999999971
Q ss_pred -------hh--HHHHHHHhCCCCeEEEEcccce
Q 029118 172 -------EG--FISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 172 -------~G--~lldAA~~~GVkRiV~vSS~~V 195 (198)
.+ .+++||+++||+||||+||.++
T Consensus 81 ~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~ 113 (317)
T CHL00194 81 NAKQIDWDGKLALIEAAKAAKIKRFIFFSILNA 113 (317)
T ss_pred chhhhhHHHHHHHHHHHHHcCCCEEEEeccccc
Confidence 12 2889999999999999999754
|
|
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.8e-20 Score=169.12 Aligned_cols=99 Identities=18% Similarity=0.256 Sum_probs=85.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc------ccc--cCCceEEEEccCCCHHHHHHhhcCccEEEE
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA------MES--FGTYVESMAGDASNKKFLKTALRGVRSIIC 169 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a------~~~--~g~~vevV~GDl~D~~sL~~AL~GvDaVIh 169 (198)
.+++|+|||||||||++++++||.+||.||+.||+++.. ..+ .+.+.+++.+|++|++++.+|++|||+|||
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVfH 84 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVFH 84 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEEE
Confidence 567999999999999999999999999999999999762 221 234589999999999999999999999999
Q ss_pred cC-------------------hhH--HHHHHHhCC-CCeEEEEccccee
Q 029118 170 PS-------------------EGF--ISNAGSLKG-VQHVILLSQGAVV 196 (198)
Q Consensus 170 ~a-------------------~G~--lldAA~~~G-VkRiV~vSS~~Vy 196 (198)
++ .|+ ++++|++.. ||||||+||.++-
T Consensus 85 ~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv 133 (327)
T KOG1502|consen 85 TASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAV 133 (327)
T ss_pred eCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHh
Confidence 82 243 899998887 9999999997653
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.2e-19 Score=144.61 Aligned_cols=94 Identities=27% Similarity=0.376 Sum_probs=86.3
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC---------h
Q 029118 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS---------E 172 (198)
Q Consensus 102 ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a---------~ 172 (198)
|+|+||||++|++++++|+++|++|++++|++++... ..+++++++|+.|++++.++++|+|+||++. .
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~~~~~~ 78 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPKDVDAA 78 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTTHHHHH
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--ccccccceeeehhhhhhhhhhhhcchhhhhhhhhccccccc
Confidence 7999999999999999999999999999999987655 6789999999999999999999999999982 1
Q ss_pred hHHHHHHHhCCCCeEEEEcccceec
Q 029118 173 GFISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 173 G~lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
..++++|+++|++|+|++|+.++|+
T Consensus 79 ~~~~~a~~~~~~~~~v~~s~~~~~~ 103 (183)
T PF13460_consen 79 KNIIEAAKKAGVKRVVYLSSAGVYR 103 (183)
T ss_dssp HHHHHHHHHTTSSEEEEEEETTGTT
T ss_pred ccccccccccccccceeeeccccCC
Confidence 1389999999999999999999886
|
... |
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=99.81 E-value=7.6e-20 Score=159.79 Aligned_cols=95 Identities=23% Similarity=0.362 Sum_probs=80.5
Q ss_pred EEEcCCChHHHHHHHHHHHCC--CcEEEEEeCCcccc--cccCCc-eEEEEccCCCHHHHHHhhcCccEEEEcC------
Q 029118 103 LVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAM--ESFGTY-VESMAGDASNKKFLKTALRGVRSIICPS------ 171 (198)
Q Consensus 103 LVTGATGfIG~~Vvr~Ll~~G--~~VralvR~~~~a~--~~~g~~-vevV~GDl~D~~sL~~AL~GvDaVIh~a------ 171 (198)
|||||+||+|+||+++|+++| ++||+++|++.... ...... .+++.+|++|++++.+|++|||+|||++
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~~~ 80 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAAPVPPW 80 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcccceeEEEeccccHHHHHHHhcCCceEEEeCcccccc
Confidence 799999999999999999999 89999998765432 112222 3499999999999999999999999982
Q ss_pred -------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 172 -------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 -------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.|+ ++++|++++|+||||+||.+|+.
T Consensus 81 ~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~ 121 (280)
T PF01073_consen 81 GDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVF 121 (280)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeE
Confidence 233 89999999999999999998864
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.4e-18 Score=151.38 Aligned_cols=105 Identities=21% Similarity=0.249 Sum_probs=87.1
Q ss_pred ccccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc-----ccc--CCceEEEEccCCCHHHHHHhhcCcc
Q 029118 93 EFPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-----ESF--GTYVESMAGDASNKKFLKTALRGVR 165 (198)
Q Consensus 93 ~~~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~-----~~~--g~~vevV~GDl~D~~sL~~AL~GvD 165 (198)
||....+++|||||||||||++++++|+++|++|++++|+.+... ... ...++++.+|++|++.+.++++++|
T Consensus 4 ~~~~~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d 83 (342)
T PLN02214 4 DVASPAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCD 83 (342)
T ss_pred ccccCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCC
Confidence 345566789999999999999999999999999999999865321 111 1358899999999999999999999
Q ss_pred EEEEcC---------------hhH--HHHHHHhCCCCeEEEEccc-ceec
Q 029118 166 SIICPS---------------EGF--ISNAGSLKGVQHVILLSQG-AVVC 197 (198)
Q Consensus 166 aVIh~a---------------~G~--lldAA~~~GVkRiV~vSS~-~Vy~ 197 (198)
+|||++ .|+ ++++|++++++||||+||. ++|.
T Consensus 84 ~Vih~A~~~~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg 133 (342)
T PLN02214 84 GVFHTASPVTDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYM 133 (342)
T ss_pred EEEEecCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeec
Confidence 999982 122 7899999999999999996 5773
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.5e-18 Score=152.09 Aligned_cols=101 Identities=15% Similarity=0.092 Sum_probs=84.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc----c-------cCCceEEEEccCCCHHHHHHhhcCcc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME----S-------FGTYVESMAGDASNKKFLKTALRGVR 165 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~----~-------~g~~vevV~GDl~D~~sL~~AL~GvD 165 (198)
..+++|||||||||||++++++|+++|++|++++|....... . ....++++.+|++|++.+.++++++|
T Consensus 13 ~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~d 92 (348)
T PRK15181 13 LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNVD 92 (348)
T ss_pred ccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCCC
Confidence 345789999999999999999999999999999985432110 0 01357899999999999999999999
Q ss_pred EEEEcC--------------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 166 SIICPS--------------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 166 aVIh~a--------------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
+|||++ .|+ ++++|++.|++||||+||.+||+
T Consensus 93 ~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg 146 (348)
T PRK15181 93 YVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYG 146 (348)
T ss_pred EEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhC
Confidence 999982 122 88999999999999999999986
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.7e-18 Score=153.37 Aligned_cols=97 Identities=11% Similarity=0.046 Sum_probs=81.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHC-CCcEEEEEeCCcccccc-------cCCceEEEEccCCCHHHHHHhhcCccEEEEcC
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~-G~~VralvR~~~~a~~~-------~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a 171 (198)
++|||||||||||++|+++|+++ |++|++++|+..+.... +..+++++.+|++|++.+.++++++|+|||++
T Consensus 15 ~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~ViHlA 94 (386)
T PLN02427 15 LTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMADLTINLA 94 (386)
T ss_pred cEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCCEEEEcc
Confidence 57999999999999999999998 59999999876543221 12469999999999999999999999999982
Q ss_pred --------------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 172 --------------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 --------------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.++ ++++|++++ +||||+||.+||+
T Consensus 95 a~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~-~r~v~~SS~~vYg 141 (386)
T PLN02427 95 AICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYG 141 (386)
T ss_pred cccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC-CEEEEEeeeeeeC
Confidence 011 688888887 9999999999986
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.9e-18 Score=146.32 Aligned_cols=93 Identities=13% Similarity=0.150 Sum_probs=81.3
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhh------cC-ccEEEEcC--
Q 029118 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL------RG-VRSIICPS-- 171 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL------~G-vDaVIh~a-- 171 (198)
+||||||||+||++++++|+++|++|++++|++++.. ..+++.+.+|+.|++++.+|+ +| +|+|+|+.
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~---~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~~ 77 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA---GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAPP 77 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc---CCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCCC
Confidence 4899999999999999999999999999999987653 246888999999999999999 68 99999872
Q ss_pred -------hhHHHHHHHhCCCCeEEEEccccee
Q 029118 172 -------EGFISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 172 -------~G~lldAA~~~GVkRiV~vSS~~Vy 196 (198)
.-.++++|+++||+||||+||.+++
T Consensus 78 ~~~~~~~~~~~i~aa~~~gv~~~V~~Ss~~~~ 109 (285)
T TIGR03649 78 IPDLAPPMIKFIDFARSKGVRRFVLLSASIIE 109 (285)
T ss_pred CCChhHHHHHHHHHHHHcCCCEEEEeeccccC
Confidence 1138999999999999999997654
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.75 E-value=7.3e-18 Score=144.97 Aligned_cols=98 Identities=15% Similarity=0.209 Sum_probs=81.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc---cc-----cCCceEEEEccCCCHHHHHHhhcCccEEEE
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ES-----FGTYVESMAGDASNKKFLKTALRGVRSIIC 169 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~---~~-----~g~~vevV~GDl~D~~sL~~AL~GvDaVIh 169 (198)
..++|||||||||||++++++|+++||+|++++|+..... .. ..++++++.+|++|++.+.++++++|+|||
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 82 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFH 82 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEE
Confidence 3578999999999999999999999999999999865421 10 124689999999999999999999999999
Q ss_pred cC-------------------hhH--HHHHHHhC-CCCeEEEEcccce
Q 029118 170 PS-------------------EGF--ISNAGSLK-GVQHVILLSQGAV 195 (198)
Q Consensus 170 ~a-------------------~G~--lldAA~~~-GVkRiV~vSS~~V 195 (198)
++ .|+ ++++|++. +++||||+||.++
T Consensus 83 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~ 130 (322)
T PLN02662 83 TASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAA 130 (322)
T ss_pred eCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHH
Confidence 72 011 78888877 9999999999763
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.9e-17 Score=148.70 Aligned_cols=107 Identities=17% Similarity=0.092 Sum_probs=87.4
Q ss_pred cCCccccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEE
Q 029118 90 KEDEFPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIIC 169 (198)
Q Consensus 90 ~~~~~~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh 169 (198)
.+++|... +++|||||||||||++++++|+++||+|+++.|............++++.+|++|.+.+.++++++|+|||
T Consensus 13 ~~~~~~~~-~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih 91 (370)
T PLN02695 13 REPYWPSE-KLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSEDMFCHEFHLVDLRVMENCLKVTKGVDHVFN 91 (370)
T ss_pred CCCCCCCC-CCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccccccccccceEEECCCCCHHHHHHHHhCCCEEEE
Confidence 45666664 46899999999999999999999999999999865322111112368899999999999999999999999
Q ss_pred cC--h-------------------h--HHHHHHHhCCCCeEEEEcccceec
Q 029118 170 PS--E-------------------G--FISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 170 ~a--~-------------------G--~lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
++ . + .++++|++.+++||||+||..+|.
T Consensus 92 ~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg 142 (370)
T PLN02695 92 LAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYP 142 (370)
T ss_pred cccccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcC
Confidence 82 0 1 178999999999999999999985
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.3e-17 Score=139.20 Aligned_cols=105 Identities=23% Similarity=0.303 Sum_probs=87.1
Q ss_pred ccccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccccc--CCceEEEEccCCC-HHHHHHhh-cCccEEE
Q 029118 93 EFPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASN-KKFLKTAL-RGVRSII 168 (198)
Q Consensus 93 ~~~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~--g~~vevV~GDl~D-~~sL~~AL-~GvDaVI 168 (198)
+-++..+++||||||||+||++++++|+++||+|++++|++++..... +.+++++.+|++| ...+.+++ .++|+||
T Consensus 11 ~~~~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi 90 (251)
T PLN00141 11 DAENVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVI 90 (251)
T ss_pred ccccccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEE
Confidence 344556789999999999999999999999999999999886643322 2468999999998 57888888 7999999
Q ss_pred EcC----------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 169 CPS----------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 169 h~a----------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
++. .++ +++++++.+++||||+||.++|.
T Consensus 91 ~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g 137 (251)
T PLN00141 91 CATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNG 137 (251)
T ss_pred ECCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccC
Confidence 871 022 78999999999999999998874
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.7e-17 Score=143.91 Aligned_cols=99 Identities=21% Similarity=0.276 Sum_probs=82.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc---cc-----cCCceEEEEccCCCHHHHHHhhcCccEEEE
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ES-----FGTYVESMAGDASNKKFLKTALRGVRSIIC 169 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~---~~-----~g~~vevV~GDl~D~~sL~~AL~GvDaVIh 169 (198)
.+++|||||||||||++++++|+++|++|++++|+..... .. ....++++.+|++|++.+.++++++|+|||
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih 83 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFH 83 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEE
Confidence 4579999999999999999999999999999999875421 11 124689999999999999999999999999
Q ss_pred cC-------------------hhH--HHHHHHhC-CCCeEEEEccccee
Q 029118 170 PS-------------------EGF--ISNAGSLK-GVQHVILLSQGAVV 196 (198)
Q Consensus 170 ~a-------------------~G~--lldAA~~~-GVkRiV~vSS~~Vy 196 (198)
++ .|+ ++++|+++ +++||||+||.++|
T Consensus 84 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~ 132 (322)
T PLN02986 84 TASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAV 132 (322)
T ss_pred eCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhhe
Confidence 82 011 67888875 89999999998754
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.1e-17 Score=144.30 Aligned_cols=99 Identities=21% Similarity=0.343 Sum_probs=82.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc---c--c---CCceEEEEccCCCHHHHHHhhcCccEEEE
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---S--F---GTYVESMAGDASNKKFLKTALRGVRSIIC 169 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~---~--~---g~~vevV~GDl~D~~sL~~AL~GvDaVIh 169 (198)
..++|||||||||||++++++|+++|++|++++|++..... . . ...++++.+|++|++.+.++++++|+|||
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~ViH 83 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVFH 83 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEEE
Confidence 35689999999999999999999999999999998754321 1 1 12578999999999999999999999999
Q ss_pred cC-------------------hhH--HHHHHHhCC-CCeEEEEccccee
Q 029118 170 PS-------------------EGF--ISNAGSLKG-VQHVILLSQGAVV 196 (198)
Q Consensus 170 ~a-------------------~G~--lldAA~~~G-VkRiV~vSS~~Vy 196 (198)
++ .|+ ++++|++.+ ++||||+||.++|
T Consensus 84 ~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~ 132 (351)
T PLN02650 84 VATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTV 132 (351)
T ss_pred eCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhc
Confidence 82 122 789998877 8999999998765
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.3e-17 Score=143.22 Aligned_cols=98 Identities=15% Similarity=0.197 Sum_probs=81.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHC-CCcEEEEEeCCcccccccC-CceEEEEccCC-CHHHHHHhhcCccEEEEcC----
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFG-TYVESMAGDAS-NKKFLKTALRGVRSIICPS---- 171 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~-G~~VralvR~~~~a~~~~g-~~vevV~GDl~-D~~sL~~AL~GvDaVIh~a---- 171 (198)
+++|||||||||||++++++|+++ |++|++++|+..+.....+ ..++++.+|++ |++.+.++++++|+|||++
T Consensus 1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~aa~~~ 80 (347)
T PRK11908 1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEYHVKKCDVILPLVAIAT 80 (347)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHHHHcCCCEEEECcccCC
Confidence 368999999999999999999986 7999999987654332222 46999999997 7888999999999999971
Q ss_pred ----------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 172 ----------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 ----------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.++ ++++|++.+ +||||+||..||+
T Consensus 81 ~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~-~~~v~~SS~~vyg 123 (347)
T PRK11908 81 PATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYG 123 (347)
T ss_pred hHHhhcCcHHHHHHHHHHHHHHHHHHHhcC-CeEEEEecceeec
Confidence 122 689999888 8999999999986
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.4e-17 Score=142.95 Aligned_cols=98 Identities=14% Similarity=0.114 Sum_probs=81.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc-----cccc-------cCCceEEEEccCCCHHHHHHhhcC--cc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AMES-------FGTYVESMAGDASNKKFLKTALRG--VR 165 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~-----a~~~-------~g~~vevV~GDl~D~~sL~~AL~G--vD 165 (198)
++|||||||||||++++++|+++|++|++++|++.. .... .+.+++++.+|++|++.+.+++++ +|
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d 80 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT 80 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence 489999999999999999999999999999997642 1111 124589999999999999999985 59
Q ss_pred EEEEcC--------------------hhH--HHHHHHhCCCC---eEEEEcccceec
Q 029118 166 SIICPS--------------------EGF--ISNAGSLKGVQ---HVILLSQGAVVC 197 (198)
Q Consensus 166 aVIh~a--------------------~G~--lldAA~~~GVk---RiV~vSS~~Vy~ 197 (198)
+|||++ .|+ ++++|++.|++ ||||+||.+||+
T Consensus 81 ~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg 137 (343)
T TIGR01472 81 EIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYG 137 (343)
T ss_pred EEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhC
Confidence 999982 122 78999988875 899999999986
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=6e-17 Score=141.55 Aligned_cols=99 Identities=19% Similarity=0.316 Sum_probs=82.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc-----ccC--CceEEEEccCCCHHHHHHhhcCccEEEEcC
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-----SFG--TYVESMAGDASNKKFLKTALRGVRSIICPS 171 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~-----~~g--~~vevV~GDl~D~~sL~~AL~GvDaVIh~a 171 (198)
+++|||||||||||++++++|+++|++|++++|++..... .+. ++++++.+|++|++.+.++++++|+|||++
T Consensus 9 ~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A 88 (338)
T PLN00198 9 KKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLVFHVA 88 (338)
T ss_pred CCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEEEEeC
Confidence 6789999999999999999999999999999998653211 111 258999999999999999999999999982
Q ss_pred -------------------hhH--HHHHHHhC-CCCeEEEEcccceec
Q 029118 172 -------------------EGF--ISNAGSLK-GVQHVILLSQGAVVC 197 (198)
Q Consensus 172 -------------------~G~--lldAA~~~-GVkRiV~vSS~~Vy~ 197 (198)
.++ ++++|.+. +++||||+||.++|.
T Consensus 89 ~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g 136 (338)
T PLN00198 89 TPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVS 136 (338)
T ss_pred CCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeee
Confidence 011 67888765 699999999998885
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.71 E-value=9.3e-17 Score=137.25 Aligned_cols=98 Identities=27% Similarity=0.345 Sum_probs=84.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC--------
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-------- 171 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a-------- 171 (198)
++||||||+||||+++++.|+++|++|+++.|++.+.......+++++.+|++|++++.++++++|.|||++
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~~ 80 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLRKAVAGCRALFHVAADYRLWAP 80 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccccCCceEEEeeCCCHHHHHHHHhCCCEEEEeceecccCCC
Confidence 479999999999999999999999999999998765433333468999999999999999999999999972
Q ss_pred ----------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 172 ----------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 ----------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.++ ++++|++.+++||||+||.++|.
T Consensus 81 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~ 118 (328)
T TIGR03466 81 DPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLG 118 (328)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcC
Confidence 111 78889999999999999998875
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=99.70 E-value=4.3e-17 Score=135.62 Aligned_cols=95 Identities=26% Similarity=0.350 Sum_probs=77.4
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc--cccccCCceEEEEccCCCHHHHHHhhcCccEEEEc-C---h---
Q 029118 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--AMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-S---E--- 172 (198)
Q Consensus 102 ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~--a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~-a---~--- 172 (198)
|+||||||.+|+++++.|+..+++|++++|++.+ +......+++++.+|+.|+++|.+||+|+|+||++ . .
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~~~~~ 80 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTPPSHPSEL 80 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSCSCCCHH
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEeecCcchhhhh
Confidence 7999999999999999999999999999999854 22222356899999999999999999999999987 2 1
Q ss_pred ---hHHHHHHHhCCCCeEEEEccccee
Q 029118 173 ---GFISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 173 ---G~lldAA~~~GVkRiV~vSS~~Vy 196 (198)
-.+++||+++||+|||+.|....+
T Consensus 81 ~~~~~li~Aa~~agVk~~v~ss~~~~~ 107 (233)
T PF05368_consen 81 EQQKNLIDAAKAAGVKHFVPSSFGADY 107 (233)
T ss_dssp HHHHHHHHHHHHHT-SEEEESEESSGT
T ss_pred hhhhhHHHhhhccccceEEEEEecccc
Confidence 129999999999999986655544
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.3e-16 Score=140.67 Aligned_cols=102 Identities=17% Similarity=0.241 Sum_probs=84.3
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-----cCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-----~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+...++||||||+||||++++++|+++|++|++++|++.+.... .+.+++++.+|++|++.+.++++++|+|||+
T Consensus 7 ~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 86 (353)
T PLN02896 7 ESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHV 86 (353)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEEC
Confidence 34566899999999999999999999999999999987543211 1246889999999999999999999999998
Q ss_pred C------h---------------------hH--HHHHHHhCC-CCeEEEEcccceec
Q 029118 171 S------E---------------------GF--ISNAGSLKG-VQHVILLSQGAVVC 197 (198)
Q Consensus 171 a------~---------------------G~--lldAA~~~G-VkRiV~vSS~~Vy~ 197 (198)
+ . ++ ++++|++++ ++||||+||.++|+
T Consensus 87 A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg 143 (353)
T PLN02896 87 AASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLT 143 (353)
T ss_pred CccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhcc
Confidence 2 0 11 578887764 99999999999885
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.4e-16 Score=135.06 Aligned_cols=96 Identities=21% Similarity=0.287 Sum_probs=82.8
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCc-cEEEEcC--------
Q 029118 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGV-RSIICPS-------- 171 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~Gv-DaVIh~a-------- 171 (198)
+|||||||||||++|+++|+++||+|+++.|...+..... ..++++.+|++|.+.+.++++++ |+|||++
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa~~~~~~~ 80 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL-SGVEFVVLDLTDRDLVDELAKGVPDAVIHLAAQSSVPDS 80 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc-cccceeeecccchHHHHHHHhcCCCEEEEccccCchhhh
Confidence 4999999999999999999999999999999776654333 56899999999999999999999 9999982
Q ss_pred -h-----h-------H--HHHHHHhCCCCeEEEEcccceec
Q 029118 172 -E-----G-------F--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 -~-----G-------~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
. . + ++++|++++++||||.||.++|.
T Consensus 81 ~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~ 121 (314)
T COG0451 81 NASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVY 121 (314)
T ss_pred hhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceEC
Confidence 1 1 1 78999999999999988877664
|
|
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.2e-16 Score=136.91 Aligned_cols=98 Identities=16% Similarity=0.222 Sum_probs=80.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc------ccc--cCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA------MES--FGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a------~~~--~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+++|||||||||||++++++|+++||+|++++|+..+. ... .+.+++++.+|++|++.+.+++.++|+|+|+
T Consensus 6 ~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~~~ 85 (297)
T PLN02583 6 SKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLFCC 85 (297)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEEEe
Confidence 56899999999999999999999999999999964321 111 1246899999999999999999999999985
Q ss_pred C------------------hhH--HHHHHHhC-CCCeEEEEccccee
Q 029118 171 S------------------EGF--ISNAGSLK-GVQHVILLSQGAVV 196 (198)
Q Consensus 171 a------------------~G~--lldAA~~~-GVkRiV~vSS~~Vy 196 (198)
. .|+ ++++|.+. +++|||++||.+++
T Consensus 86 ~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~ 132 (297)
T PLN02583 86 FDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAV 132 (297)
T ss_pred CccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHhe
Confidence 1 122 78888776 79999999998654
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.4e-16 Score=143.23 Aligned_cols=102 Identities=24% Similarity=0.261 Sum_probs=85.5
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc--------ccCCceEEEEccCCCHHHHHHhhc----C
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--------SFGTYVESMAGDASNKKFLKTALR----G 163 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~--------~~g~~vevV~GDl~D~~sL~~AL~----G 163 (198)
...+++|||||||||||++++++|+++|++|++++|++.+... ...++++++.+|++|++++.++++ +
T Consensus 57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~ 136 (390)
T PLN02657 57 EPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDP 136 (390)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCC
Confidence 4456789999999999999999999999999999998754210 113468999999999999999998 5
Q ss_pred ccEEEEcC---------------hh--HHHHHHHhCCCCeEEEEcccceec
Q 029118 164 VRSIICPS---------------EG--FISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 164 vDaVIh~a---------------~G--~lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
+|+|||+. .+ .++++|++.|++|||++||.++|.
T Consensus 137 ~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~ 187 (390)
T PLN02657 137 VDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQK 187 (390)
T ss_pred CcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccC
Confidence 99999871 11 278999999999999999998874
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.1e-16 Score=151.98 Aligned_cols=102 Identities=15% Similarity=0.103 Sum_probs=83.3
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHC-CCcEEEEEeCCccccccc-CCceEEEEccCCCHHH-HHHhhcCccEEEEcC
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESF-GTYVESMAGDASNKKF-LKTALRGVRSIICPS 171 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~-G~~VralvR~~~~a~~~~-g~~vevV~GDl~D~~s-L~~AL~GvDaVIh~a 171 (198)
..-+.++|||||||||||+||+++|+++ ||+|++++|++....... ..+++++.+|++|+.. +.++++++|+|||++
T Consensus 311 ~~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~~~~l~~~l~~~D~ViHlA 390 (660)
T PRK08125 311 SAKRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLGHPRFHFVEGDISIHSEWIEYHIKKCDVVLPLV 390 (660)
T ss_pred hhhcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcCCCceEEEeccccCcHHHHHHHhcCCCEEEECc
Confidence 3456778999999999999999999985 799999999775432222 2468999999999765 678899999999972
Q ss_pred --------------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 172 --------------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 --------------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.++ ++++|++++ +||||+||..||+
T Consensus 391 a~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~~~V~~SS~~vyg 437 (660)
T PRK08125 391 AIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN-KRIIFPSTSEVYG 437 (660)
T ss_pred cccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC-CeEEEEcchhhcC
Confidence 112 789999998 8999999999986
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=99.67 E-value=4e-16 Score=144.17 Aligned_cols=102 Identities=20% Similarity=0.183 Sum_probs=81.7
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc-------c----------------cccCCceEEEEccCC
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-------M----------------ESFGTYVESMAGDAS 152 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a-------~----------------~~~g~~vevV~GDl~ 152 (198)
...+++|||||||||||+||+++|+++|++|+++.|..... . ...+.+++++.+|++
T Consensus 44 ~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 123 (442)
T PLN02572 44 SSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDIC 123 (442)
T ss_pred cccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCC
Confidence 34457899999999999999999999999999986422110 0 001235899999999
Q ss_pred CHHHHHHhhc--CccEEEEcC-----------------------hhH--HHHHHHhCCCC-eEEEEcccceec
Q 029118 153 NKKFLKTALR--GVRSIICPS-----------------------EGF--ISNAGSLKGVQ-HVILLSQGAVVC 197 (198)
Q Consensus 153 D~~sL~~AL~--GvDaVIh~a-----------------------~G~--lldAA~~~GVk-RiV~vSS~~Vy~ 197 (198)
|++.+.++++ ++|+|||++ .|+ ++++|++.|++ ||||+||.+||+
T Consensus 124 d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG 196 (442)
T PLN02572 124 DFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYG 196 (442)
T ss_pred CHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecC
Confidence 9999999998 489999982 011 78999999996 999999999996
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.8e-16 Score=141.04 Aligned_cols=99 Identities=15% Similarity=0.185 Sum_probs=81.5
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc--c---------CCceEEEEccCCCHHHHHHhhcCc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--F---------GTYVESMAGDASNKKFLKTALRGV 164 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~--~---------g~~vevV~GDl~D~~sL~~AL~Gv 164 (198)
...+++|||||||||||++++++|+++|++|++++|+.+..... . ...++++.+|++|++.+.++++++
T Consensus 50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~~ 129 (367)
T PLN02686 50 DAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDGC 129 (367)
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHHhc
Confidence 44577999999999999999999999999999999976442211 0 125889999999999999999999
Q ss_pred cEEEEcC-----h---------------hH--HHHHHHhC-CCCeEEEEcccc
Q 029118 165 RSIICPS-----E---------------GF--ISNAGSLK-GVQHVILLSQGA 194 (198)
Q Consensus 165 DaVIh~a-----~---------------G~--lldAA~~~-GVkRiV~vSS~~ 194 (198)
|+|||++ . ++ ++++|++. +|+||||+||..
T Consensus 130 d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~ 182 (367)
T PLN02686 130 AGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLL 182 (367)
T ss_pred cEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHH
Confidence 9999972 0 11 78999875 899999999963
|
|
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.66 E-value=5.2e-16 Score=139.44 Aligned_cols=98 Identities=20% Similarity=0.237 Sum_probs=82.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCc-eEEEEccCCCHHHHHHhhc--CccEEEEcC-----
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTY-VESMAGDASNKKFLKTALR--GVRSIICPS----- 171 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~-vevV~GDl~D~~sL~~AL~--GvDaVIh~a----- 171 (198)
++||||||+|+||+|.+.+|+++|++|.++..-...-.+..... +++++||+.|.+.|.+.++ .+|+|||.+
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~~V 80 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEENKIDAVVHFAASISV 80 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhcCCCEEEECcccccc
Confidence 58999999999999999999999999999985333222222222 6899999999999999995 679999982
Q ss_pred ---------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 172 ---------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 ---------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.|+ ++++|+++||++|||-||.+||+
T Consensus 81 gESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG 123 (329)
T COG1087 81 GESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYG 123 (329)
T ss_pred chhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcC
Confidence 133 89999999999999999999997
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.2e-15 Score=132.21 Aligned_cols=98 Identities=20% Similarity=0.266 Sum_probs=81.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc---c-----cCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---S-----FGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~---~-----~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+++||||||+||||++++++|+++|++|++++|++..... . ...+++++.+|++|++.+.++++++|+|||+
T Consensus 5 ~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih~ 84 (325)
T PLN02989 5 GKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVFHT 84 (325)
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEEEe
Confidence 5789999999999999999999999999999998754211 1 1135899999999999999999999999998
Q ss_pred C--------------------hhH--HHHHHHhC-CCCeEEEEccccee
Q 029118 171 S--------------------EGF--ISNAGSLK-GVQHVILLSQGAVV 196 (198)
Q Consensus 171 a--------------------~G~--lldAA~~~-GVkRiV~vSS~~Vy 196 (198)
+ .++ ++++|.+. +++|||++||.++|
T Consensus 85 A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~ 133 (325)
T PLN02989 85 ASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAV 133 (325)
T ss_pred CCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhhe
Confidence 2 011 67888764 68999999998765
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.65 E-value=4.3e-16 Score=127.05 Aligned_cols=96 Identities=24% Similarity=0.309 Sum_probs=82.3
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-cCCceEEEEccCCCHHHHHHhhcCc--cEEEEcC--h----
Q 029118 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-FGTYVESMAGDASNKKFLKTALRGV--RSIICPS--E---- 172 (198)
Q Consensus 102 ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-~g~~vevV~GDl~D~~sL~~AL~Gv--DaVIh~a--~---- 172 (198)
|||||||||||++++++|+++|++|+++.|++...... ...+++++.+|+.|++.+.+++++. |+|||++ .
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~ 80 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFSSNPE 80 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHHTESEEEEEBSSSSHHH
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeeccccccccccccccCceEEEEeeccccccc
Confidence 79999999999999999999999999999887654211 1126999999999999999999888 9999982 0
Q ss_pred --------------h--HHHHHHHhCCCCeEEEEcccceec
Q 029118 173 --------------G--FISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 173 --------------G--~lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
+ .++++|++++++|+||+||..+|.
T Consensus 81 ~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~ 121 (236)
T PF01370_consen 81 SFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYG 121 (236)
T ss_dssp HHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGT
T ss_pred ccccccccccccccccccccccccccccccccccccccccc
Confidence 0 178999999999999999999885
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.6e-15 Score=131.58 Aligned_cols=98 Identities=22% Similarity=0.245 Sum_probs=79.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc-------ccCCceEEEEccCCCHHHHHHhhc--CccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------SFGTYVESMAGDASNKKFLKTALR--GVRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~-------~~g~~vevV~GDl~D~~sL~~AL~--GvDaVIh~ 170 (198)
|+|||||||||||++++++|+++|++|+++.|....... ..+..++++.+|++|++++.++++ ++|+|||+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~ 80 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIHF 80 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEEC
Confidence 579999999999999999999999999999765322111 112357889999999999999986 68999997
Q ss_pred C--------------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 171 S--------------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 171 a--------------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
+ .++ ++++|+++|+++||++||.++|.
T Consensus 81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg 129 (338)
T PRK10675 81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYG 129 (338)
T ss_pred CccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhC
Confidence 2 012 78899999999999999998874
|
|
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=4.7e-16 Score=139.26 Aligned_cols=100 Identities=16% Similarity=0.205 Sum_probs=80.0
Q ss_pred CCCCeEEEE----cCCChHHHHHHHHHHHCCCcEEEEEeCCccccc-----------ccCCceEEEEccCCCHHHHHHhh
Q 029118 97 EARDAVLVT----DGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-----------SFGTYVESMAGDASNKKFLKTAL 161 (198)
Q Consensus 97 ~~~~~ILVT----GATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~-----------~~g~~vevV~GDl~D~~sL~~AL 161 (198)
..+++|||| |||||||++++++|+++||+|++++|++..... ....+++++.+|+.|...+. +.
T Consensus 50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~~~-~~ 128 (378)
T PLN00016 50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPADVKSKV-AG 128 (378)
T ss_pred cccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHHHHhhh-cc
Confidence 334689999 999999999999999999999999998754211 11235899999998843333 34
Q ss_pred cCccEEEEcC----hh--HHHHHHHhCCCCeEEEEcccceec
Q 029118 162 RGVRSIICPS----EG--FISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 162 ~GvDaVIh~a----~G--~lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.++|+|||+. .+ .++++|+++||+||||+||.+||+
T Consensus 129 ~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg 170 (378)
T PLN00016 129 AGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSAGVYK 170 (378)
T ss_pred CCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEccHhhcC
Confidence 6899999982 22 389999999999999999999985
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.6e-15 Score=132.68 Aligned_cols=100 Identities=16% Similarity=0.158 Sum_probs=82.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc-----cccc------cCCceEEEEccCCCHHHHHHhhcC--c
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AMES------FGTYVESMAGDASNKKFLKTALRG--V 164 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~-----a~~~------~g~~vevV~GDl~D~~sL~~AL~G--v 164 (198)
++++|||||||||||++++++|+++|++|+++.|++.. .... .+.+++++.+|++|.+.+.++++. +
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 84 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIKP 84 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcCC
Confidence 45789999999999999999999999999999987542 1111 124589999999999999999985 5
Q ss_pred cEEEEcC--------------------hhH--HHHHHHhCCCC-----eEEEEcccceec
Q 029118 165 RSIICPS--------------------EGF--ISNAGSLKGVQ-----HVILLSQGAVVC 197 (198)
Q Consensus 165 DaVIh~a--------------------~G~--lldAA~~~GVk-----RiV~vSS~~Vy~ 197 (198)
|+|||++ .|+ ++++|++.+++ ||||+||.++|+
T Consensus 85 d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg 144 (340)
T PLN02653 85 DEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYG 144 (340)
T ss_pred CEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhC
Confidence 9999982 122 78999988886 999999998886
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.9e-15 Score=130.46 Aligned_cols=99 Identities=16% Similarity=0.143 Sum_probs=77.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc---c---cc-cCCceEEEEccCCCHHHHHHhhcC--ccEEEE
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA---M---ES-FGTYVESMAGDASNKKFLKTALRG--VRSIIC 169 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a---~---~~-~g~~vevV~GDl~D~~sL~~AL~G--vDaVIh 169 (198)
+++|||||||||||++++++|+++|++|+++.++.... . .. ....++++.+|++|++.+.+++++ +|.|||
T Consensus 1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih 80 (355)
T PRK10217 1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMH 80 (355)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEEE
Confidence 36899999999999999999999999877665533211 1 10 123578999999999999999984 899999
Q ss_pred cC--------------------hhH--HHHHHHh---------CCCCeEEEEcccceec
Q 029118 170 PS--------------------EGF--ISNAGSL---------KGVQHVILLSQGAVVC 197 (198)
Q Consensus 170 ~a--------------------~G~--lldAA~~---------~GVkRiV~vSS~~Vy~ 197 (198)
++ .|+ ++++|++ .++++|||+||.++|.
T Consensus 81 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg 139 (355)
T PRK10217 81 LAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYG 139 (355)
T ss_pred CCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcC
Confidence 82 112 7788865 4789999999998885
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.2e-15 Score=131.03 Aligned_cols=85 Identities=20% Similarity=0.189 Sum_probs=72.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc--CccEEEEcC------
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPS------ 171 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~--GvDaVIh~a------ 171 (198)
|+||||||+||||++++++|+++| +|+++.|... .+.+|++|++.+.++++ ++|+|||++
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-----------~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~~~~~ 68 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST-----------DYCGDFSNPEGVAETVRKIRPDVIVNAAAHTAVD 68 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-----------cccCCCCCHHHHHHHHHhcCCCEEEECCccCCcc
Confidence 479999999999999999999999 7999887531 35689999999999998 579999982
Q ss_pred --------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 172 --------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 --------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.++ ++++|++.|+ ++||+||..||.
T Consensus 69 ~~~~~~~~~~~~N~~~~~~l~~aa~~~g~-~~v~~Ss~~Vy~ 109 (299)
T PRK09987 69 KAESEPEFAQLLNATSVEAIAKAANEVGA-WVVHYSTDYVFP 109 (299)
T ss_pred hhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEccceEEC
Confidence 112 7899999996 799999999984
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.5e-15 Score=131.44 Aligned_cols=99 Identities=18% Similarity=0.163 Sum_probs=81.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-----cCCceEEEEccCCCHHHHHHhhcC--ccEEEEcC
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTALRG--VRSIICPS 171 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-----~g~~vevV~GDl~D~~sL~~AL~G--vDaVIh~a 171 (198)
+++|||||||||||++++++|+++|++|+++.|++...... .+..++++.+|++|++.+.+++++ +|.|||++
T Consensus 4 ~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~A 83 (349)
T TIGR02622 4 GKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHLA 83 (349)
T ss_pred CCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEECC
Confidence 57899999999999999999999999999999877543211 123578899999999999999986 59999982
Q ss_pred --------------------hhH--HHHHHHhCC-CCeEEEEcccceec
Q 029118 172 --------------------EGF--ISNAGSLKG-VQHVILLSQGAVVC 197 (198)
Q Consensus 172 --------------------~G~--lldAA~~~G-VkRiV~vSS~~Vy~ 197 (198)
.++ ++++|++.+ ++||||+||..+|+
T Consensus 84 ~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg 132 (349)
T TIGR02622 84 AQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYR 132 (349)
T ss_pred cccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhC
Confidence 012 688888877 89999999988874
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.62 E-value=4.2e-15 Score=129.63 Aligned_cols=100 Identities=18% Similarity=0.260 Sum_probs=81.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc-------cc---ccCCceEEEEccCCCHHHHHHhhc--Ccc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-------ME---SFGTYVESMAGDASNKKFLKTALR--GVR 165 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a-------~~---~~g~~vevV~GDl~D~~sL~~AL~--GvD 165 (198)
.+++|||||||||||++++++|+++|++|+++.|..... .. ..+.+++++.+|++|++.+.++++ ++|
T Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~d 83 (352)
T PLN02240 4 MGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTRFD 83 (352)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCCCC
Confidence 357899999999999999999999999999998753221 11 123468899999999999999986 689
Q ss_pred EEEEcC--------------------hh--HHHHHHHhCCCCeEEEEcccceec
Q 029118 166 SIICPS--------------------EG--FISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 166 aVIh~a--------------------~G--~lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.|||++ .+ .++++|++.++++|||+||.++|.
T Consensus 84 ~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg 137 (352)
T PLN02240 84 AVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYG 137 (352)
T ss_pred EEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhC
Confidence 999982 01 177889999999999999998884
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.61 E-value=5e-15 Score=130.34 Aligned_cols=98 Identities=26% Similarity=0.435 Sum_probs=81.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCC--CcEEEEEeCCcccc---ccc-CCceEEEEccCCCHHHHHHhhcCccEEEEcC
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAM---ESF-GTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G--~~VralvR~~~~a~---~~~-g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a 171 (198)
.+++|||||||||||++++++|+++| ++|++++|+..+.. ... ...++++.+|++|++.+.++++++|+|||++
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~A 82 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHAA 82 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEECc
Confidence 35789999999999999999999986 78999998765421 111 2468999999999999999999999999972
Q ss_pred --------------------hhH--HHHHHHhCCCCeEEEEcccce
Q 029118 172 --------------------EGF--ISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 172 --------------------~G~--lldAA~~~GVkRiV~vSS~~V 195 (198)
.|+ ++++|++++++|||++||...
T Consensus 83 g~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~ 128 (324)
T TIGR03589 83 ALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKA 128 (324)
T ss_pred ccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCC
Confidence 022 789999999999999999654
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.9e-15 Score=124.00 Aligned_cols=96 Identities=24% Similarity=0.306 Sum_probs=83.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc-C--h----
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-S--E---- 172 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~-a--~---- 172 (198)
++||||||||++|++++++|+++||+|++++|+++++.... .+++++.+|+.|+.++..+++|++.++++ . .
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~-~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~~~~~~~ 79 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA-GGVEVVLGDLRDPKSLVAGAKGVDGVLLISGLLDGSDA 79 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc-CCcEEEEeccCCHhHHHHHhccccEEEEEecccccccc
Confidence 57999999999999999999999999999999998876655 78999999999999999999999999876 1 1
Q ss_pred --h----HHHHHHHhCC--CCeEEEEccccee
Q 029118 173 --G----FISNAGSLKG--VQHVILLSQGAVV 196 (198)
Q Consensus 173 --G----~lldAA~~~G--VkRiV~vSS~~Vy 196 (198)
. .+++++++++ +++++++|++++.
T Consensus 80 ~~~~~~~~~~~~a~~a~~~~~~~~~~s~~~~~ 111 (275)
T COG0702 80 FRAVQVTAVVRAAEAAGAGVKHGVSLSVLGAD 111 (275)
T ss_pred hhHHHHHHHHHHHHHhcCCceEEEEeccCCCC
Confidence 1 1566666654 9999999998764
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=99.60 E-value=4.6e-15 Score=137.54 Aligned_cols=95 Identities=18% Similarity=0.137 Sum_probs=75.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc-----ccCCceEEEEccCCCHHHHHHhhcCccEEEEcC
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-----SFGTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~-----~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a 171 (198)
...++|||||||||||++|+++|+++|++|++++|....... ....+++++.+|+.++ ++.++|+|||++
T Consensus 117 ~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~-----~l~~~D~ViHlA 191 (442)
T PLN02206 117 RKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEP-----ILLEVDQIYHLA 191 (442)
T ss_pred cCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhccCCceEEEECCccCh-----hhcCCCEEEEee
Confidence 345789999999999999999999999999999875322111 1124689999999776 456899999982
Q ss_pred --------------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 172 --------------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 --------------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.++ ++++|++.|+ ||||+||..||+
T Consensus 192 a~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~-r~V~~SS~~VYg 238 (442)
T PLN02206 192 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYG 238 (442)
T ss_pred eecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECChHHhC
Confidence 112 7899999996 899999999985
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=7.6e-15 Score=141.01 Aligned_cols=98 Identities=20% Similarity=0.291 Sum_probs=83.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccccc-----------C----CceEEEEccCCCHHHHHHhhcC
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-----------G----TYVESMAGDASNKKFLKTALRG 163 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~-----------g----~~vevV~GDl~D~~sL~~AL~G 163 (198)
+++||||||+|+||++++++|+++|++|++++|+.++..... + .+++++.+|+.|.+.+.+++.+
T Consensus 80 gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aLgg 159 (576)
T PLN03209 80 EDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPALGN 159 (576)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHhcC
Confidence 468999999999999999999999999999999886543210 1 2488999999999999999999
Q ss_pred ccEEEEcC------------------hhH--HHHHHHhCCCCeEEEEccccee
Q 029118 164 VRSIICPS------------------EGF--ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 164 vDaVIh~a------------------~G~--lldAA~~~GVkRiV~vSS~~Vy 196 (198)
+|+|||++ .|+ ++++|+++|++|||++||++++
T Consensus 160 iDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~ 212 (576)
T PLN03209 160 ASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTN 212 (576)
T ss_pred CCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhc
Confidence 99999982 012 7899999999999999998764
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.1e-14 Score=139.55 Aligned_cols=99 Identities=21% Similarity=0.249 Sum_probs=79.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHC--CCcEEEEEeCC--cccccc----cCCceEEEEccCCCHHHHHHhh--cCccEEE
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVK--RTRIKALVKDK--RNAMES----FGTYVESMAGDASNKKFLKTAL--RGVRSII 168 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~--G~~VralvR~~--~~a~~~----~g~~vevV~GDl~D~~sL~~AL--~GvDaVI 168 (198)
.++|||||||||||++++++|+++ +++|+++.|.. ...... ...+++++.+|++|++.+..++ .++|+||
T Consensus 6 ~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~Vi 85 (668)
T PLN02260 6 PKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDTIM 85 (668)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCEEE
Confidence 468999999999999999999998 68898888743 111111 1246899999999999988776 6899999
Q ss_pred EcC--------------------hhH--HHHHHHhCC-CCeEEEEcccceec
Q 029118 169 CPS--------------------EGF--ISNAGSLKG-VQHVILLSQGAVVC 197 (198)
Q Consensus 169 h~a--------------------~G~--lldAA~~~G-VkRiV~vSS~~Vy~ 197 (198)
|++ .++ ++++|++.+ ++||||+||..||+
T Consensus 86 HlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg 137 (668)
T PLN02260 86 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYG 137 (668)
T ss_pred ECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhC
Confidence 982 012 789999887 99999999999885
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=8.1e-15 Score=138.38 Aligned_cols=97 Identities=16% Similarity=0.231 Sum_probs=78.4
Q ss_pred CeEEEEcCCChHHHHHHHHHH--HCCCcEEEEEeCCcccc--c---ccC-CceEEEEccCCCH------HHHHHhhcCcc
Q 029118 100 DAVLVTDGDSDIGQMVILSLI--VKRTRIKALVKDKRNAM--E---SFG-TYVESMAGDASNK------KFLKTALRGVR 165 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll--~~G~~VralvR~~~~a~--~---~~g-~~vevV~GDl~D~------~sL~~AL~GvD 165 (198)
|+|||||||||||++|+++|+ .+|++|++++|++.... . .++ .+++++.+|++|+ +.+.++ +++|
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~~~D 79 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-GDID 79 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-cCCC
Confidence 479999999999999999999 58999999999754321 1 111 4689999999995 455555 9999
Q ss_pred EEEEcC-----------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 166 SIICPS-----------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 166 aVIh~a-----------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
+|||++ .|+ ++++|++.++++|||+||.++|+
T Consensus 80 ~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g 130 (657)
T PRK07201 80 HVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAG 130 (657)
T ss_pred EEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEecccccc
Confidence 999982 122 78999999999999999999874
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.58 E-value=7.3e-15 Score=136.00 Aligned_cols=95 Identities=19% Similarity=0.180 Sum_probs=75.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc----ccc-CCceEEEEccCCCHHHHHHhhcCccEEEEcC
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM----ESF-GTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~----~~~-g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a 171 (198)
.+.++|||||||||||++|+++|+++|++|+++.|...... ... .+.++++.+|+.++ ++.++|+|||++
T Consensus 118 ~~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~-----~~~~~D~ViHlA 192 (436)
T PLN02166 118 RKRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEP-----ILLEVDQIYHLA 192 (436)
T ss_pred cCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhccCCceEEEECccccc-----cccCCCEEEECc
Confidence 34568999999999999999999999999999998542211 111 23588999998775 467899999982
Q ss_pred --------------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 172 --------------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 --------------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.|+ ++++|+++++ ||||+||.+||+
T Consensus 193 a~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~-r~V~~SS~~VYg 239 (436)
T PLN02166 193 CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-RFLLTSTSEVYG 239 (436)
T ss_pred eeccchhhccCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECcHHHhC
Confidence 112 7899999986 899999999985
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.3e-14 Score=124.69 Aligned_cols=97 Identities=19% Similarity=0.270 Sum_probs=78.4
Q ss_pred eEEEEcCCChHHHHHHHHHHHCC--CcEEEEEeCCcccc------cc----------cC-CceEEEEccCCCH------H
Q 029118 101 AVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAM------ES----------FG-TYVESMAGDASNK------K 155 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~G--~~VralvR~~~~a~------~~----------~g-~~vevV~GDl~D~------~ 155 (198)
+|||||||||||++++++|+++| ++|++++|+++... .. .. .+++++.+|++++ +
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 58999999999999999999999 66999999875320 00 01 4699999999864 5
Q ss_pred HHHHhhcCccEEEEcC-----------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 156 FLKTALRGVRSIICPS-----------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 156 sL~~AL~GvDaVIh~a-----------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.+..+.+++|+|||++ .++ ++++|.+.++++|||+||.++|.
T Consensus 81 ~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~ 141 (367)
T TIGR01746 81 EWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLA 141 (367)
T ss_pred HHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccC
Confidence 6778889999999982 122 78899999999999999998874
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.4e-14 Score=121.29 Aligned_cols=97 Identities=15% Similarity=0.143 Sum_probs=76.4
Q ss_pred eEEEEcCCChHHHHHHHHHHHCC--CcEEEEEeCCc--c---cccc-cCCceEEEEccCCCHHHHHHhhcC--ccEEEEc
Q 029118 101 AVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKR--N---AMES-FGTYVESMAGDASNKKFLKTALRG--VRSIICP 170 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~G--~~VralvR~~~--~---a~~~-~g~~vevV~GDl~D~~sL~~AL~G--vDaVIh~ 170 (198)
+||||||||+||++++++|+++| ++|+++.|... + .... ..++++++.+|++|++++.+++++ +|+|||+
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~ 80 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAVVHF 80 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEEEc
Confidence 48999999999999999999987 78888876321 1 1111 123688999999999999999998 8999998
Q ss_pred C--------------------hhH--HHHHHHhCCCC-eEEEEcccceec
Q 029118 171 S--------------------EGF--ISNAGSLKGVQ-HVILLSQGAVVC 197 (198)
Q Consensus 171 a--------------------~G~--lldAA~~~GVk-RiV~vSS~~Vy~ 197 (198)
+ .++ ++++|++.+++ ++||+||..+|+
T Consensus 81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g 130 (317)
T TIGR01181 81 AAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYG 130 (317)
T ss_pred ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeC
Confidence 2 011 67888887655 899999998875
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.2e-14 Score=131.23 Aligned_cols=100 Identities=25% Similarity=0.326 Sum_probs=83.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCC--CcEEEEEeCCcc--cc-ccc---CCceEEEEccCCCHHHHHHhhcCccEEE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRN--AM-ESF---GTYVESMAGDASNKKFLKTALRGVRSII 168 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G--~~VralvR~~~~--a~-~~~---g~~vevV~GDl~D~~sL~~AL~GvDaVI 168 (198)
.++.++|||||+||+|+|++++|++++ .+||++...+.. .. +.. ...++++.+|++|...+..|++|+ .|+
T Consensus 2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~Vv 80 (361)
T KOG1430|consen 2 EKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGA-VVV 80 (361)
T ss_pred CcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCc-eEE
Confidence 356789999999999999999999998 899999876642 11 111 467999999999999999999999 777
Q ss_pred Ec-C-------------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 169 CP-S-------------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 169 h~-a-------------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
|+ + .|+ ++++|++.||+|+||+||..|..
T Consensus 81 h~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf 131 (361)
T KOG1430|consen 81 HCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVF 131 (361)
T ss_pred EeccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEe
Confidence 76 2 243 89999999999999999998864
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.5e-14 Score=124.45 Aligned_cols=92 Identities=15% Similarity=0.142 Sum_probs=68.2
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCH---HH-HHHhhc-----CccEEEEcC
Q 029118 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KF-LKTALR-----GVRSIICPS 171 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~---~s-L~~AL~-----GvDaVIh~a 171 (198)
+|||||||||||+|++++|+++|++|++++|+....... ..++.+|+.|. +. +.++++ ++|+|||++
T Consensus 1 ~ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih~A 76 (308)
T PRK11150 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF----VNLVDLDIADYMDKEDFLAQIMAGDDFGDIEAIFHEG 76 (308)
T ss_pred CEEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH----HhhhhhhhhhhhhHHHHHHHHhcccccCCccEEEECc
Confidence 589999999999999999999999999888876432111 12334555554 33 344443 699999972
Q ss_pred ------------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 172 ------------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 ------------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.++ ++++|++.++ +|||+||.+||+
T Consensus 77 ~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~-~~i~~SS~~vyg 121 (308)
T PRK11150 77 ACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYG 121 (308)
T ss_pred eecCCcCCChHHHHHHHHHHHHHHHHHHHHcCC-cEEEEcchHHhC
Confidence 112 8899999998 699999999886
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=4.7e-14 Score=123.53 Aligned_cols=98 Identities=16% Similarity=0.094 Sum_probs=74.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEE-EEEeCCc--c---ccccc-CCceEEEEccCCCHHHHHHhhc--CccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIK-ALVKDKR--N---AMESF-GTYVESMAGDASNKKFLKTALR--GVRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~Vr-alvR~~~--~---a~~~~-g~~vevV~GDl~D~~sL~~AL~--GvDaVIh~ 170 (198)
++|||||||||||++++++|+++|++++ ++.|... . ..... +..++++.+|++|++++.++++ ++|+|||+
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 80 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMHL 80 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEEC
Confidence 4799999999999999999999998744 4443221 1 11111 2357889999999999999996 48999998
Q ss_pred C--------------------hhH--HHHHHHhC---------CCCeEEEEcccceec
Q 029118 171 S--------------------EGF--ISNAGSLK---------GVQHVILLSQGAVVC 197 (198)
Q Consensus 171 a--------------------~G~--lldAA~~~---------GVkRiV~vSS~~Vy~ 197 (198)
+ .|+ ++++|++. ++++|||+||..+|.
T Consensus 81 A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg 138 (352)
T PRK10084 81 AAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYG 138 (352)
T ss_pred CcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcC
Confidence 2 122 78888763 688999999998885
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=99.53 E-value=4.5e-14 Score=119.62 Aligned_cols=81 Identities=17% Similarity=0.301 Sum_probs=70.9
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCc--cEEEEcC-------
Q 029118 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGV--RSIICPS------- 171 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~Gv--DaVIh~a------- 171 (198)
+|||||||||||++++++|+++||+|++++|. .+|+.|++.+.++++++ |+|||++
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~---------------~~d~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~ 65 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSS---------------QLDLTDPEALERLLRAIRPDAVVNTAAYTDVDG 65 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc---------------ccCCCCHHHHHHHHHhCCCCEEEECCccccccc
Confidence 58999999999999999999999999999884 47999999999999987 9999972
Q ss_pred -------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 172 -------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 -------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.++ ++++|++.++ ||||+||.+||.
T Consensus 66 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~Ss~~vy~ 105 (287)
T TIGR01214 66 AESDPEKAFAVNALAPQNLARAAARHGA-RLVHISTDYVFD 105 (287)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeeeeec
Confidence 012 6788888886 899999999884
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.51 E-value=5.6e-14 Score=127.21 Aligned_cols=100 Identities=19% Similarity=0.265 Sum_probs=83.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCC-------cccccccC--CceEEEEccCCCHHHHHHhhc--CccEE
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-------RNAMESFG--TYVESMAGDASNKKFLKTALR--GVRSI 167 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~-------~~a~~~~g--~~vevV~GDl~D~~sL~~AL~--GvDaV 167 (198)
.++||||||+||||+|.+.+|+++|+.|.++.-=. .+.....+ ..++++++|++|.++|++.++ ..|+|
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V 81 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAV 81 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceE
Confidence 35899999999999999999999999999997311 11223334 679999999999999999996 45999
Q ss_pred EEcC--------------------hhH--HHHHHHhCCCCeEEEEcccceecC
Q 029118 168 ICPS--------------------EGF--ISNAGSLKGVQHVILLSQGAVVCL 198 (198)
Q Consensus 168 Ih~a--------------------~G~--lldAA~~~GVkRiV~vSS~~Vy~~ 198 (198)
+|.+ .|+ ++++|++++++++||.||.+||++
T Consensus 82 ~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~ 134 (343)
T KOG1371|consen 82 MHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGL 134 (343)
T ss_pred EeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecC
Confidence 9972 133 899999999999999999999974
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.51 E-value=8.6e-14 Score=130.62 Aligned_cols=101 Identities=14% Similarity=0.235 Sum_probs=80.0
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCC---cEEEEEeCCccc--ccc----------c---------------CCceEE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRT---RIKALVKDKRNA--MES----------F---------------GTYVES 146 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~---~VralvR~~~~a--~~~----------~---------------g~~vev 146 (198)
-.+++|||||||||+|+++++.|+..+. +|.+++|+.... .+. + ..++++
T Consensus 9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~ 88 (491)
T PLN02996 9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP 88 (491)
T ss_pred hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence 4567899999999999999999998654 578999976421 100 1 146899
Q ss_pred EEccCC-------CHHHHHHhhcCccEEEEcC-----------------hhH--HHHHHHhC-CCCeEEEEcccceec
Q 029118 147 MAGDAS-------NKKFLKTALRGVRSIICPS-----------------EGF--ISNAGSLK-GVQHVILLSQGAVVC 197 (198)
Q Consensus 147 V~GDl~-------D~~sL~~AL~GvDaVIh~a-----------------~G~--lldAA~~~-GVkRiV~vSS~~Vy~ 197 (198)
+.||++ |.+.+.++++++|+|||++ .|+ ++++|++. ++++|||+||..||+
T Consensus 89 i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vyG 166 (491)
T PLN02996 89 VPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCG 166 (491)
T ss_pred EecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEec
Confidence 999998 5566788899999999982 122 78999875 899999999999985
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.4e-13 Score=116.80 Aligned_cols=97 Identities=23% Similarity=0.294 Sum_probs=77.2
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccC-----CceEEEEccCCCHHHHHHhhc--CccEEEEcC--
Q 029118 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-----TYVESMAGDASNKKFLKTALR--GVRSIICPS-- 171 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g-----~~vevV~GDl~D~~sL~~AL~--GvDaVIh~a-- 171 (198)
+||||||||+||++++++|+++|++|+++.|.......... ..++++.+|++|++.+.++++ ++|.|||++
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ag~ 80 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFAGL 80 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEECccc
Confidence 58999999999999999999999999987653322111110 147889999999999999996 689999982
Q ss_pred ------------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 172 ------------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 ------------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.++ ++++|.+.++++||++||.++|.
T Consensus 81 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g 126 (328)
T TIGR01179 81 IAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYG 126 (328)
T ss_pred cCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcC
Confidence 011 67889999999999999988774
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=99.50 E-value=6.4e-14 Score=119.20 Aligned_cols=81 Identities=12% Similarity=0.122 Sum_probs=69.1
Q ss_pred EEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc--CccEEEEcC---------
Q 029118 103 LVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPS--------- 171 (198)
Q Consensus 103 LVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~--GvDaVIh~a--------- 171 (198)
||||||||||++++++|+++|++|+++.+. ..+|++|++++.++++ ++|+|||++
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~--------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~~~~~~ 66 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH--------------KELDLTRQADVEAFFAKEKPTYVILAAAKVGGIHAN 66 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeecc--------------ccCCCCCHHHHHHHHhccCCCEEEEeeeeecccchh
Confidence 699999999999999999999998866432 2489999999999987 469999982
Q ss_pred ------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 172 ------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 ------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.++ ++++|++++++|+||+||..||.
T Consensus 67 ~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg 106 (306)
T PLN02725 67 MTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYP 106 (306)
T ss_pred hhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecC
Confidence 011 78999999999999999999985
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.5e-13 Score=134.76 Aligned_cols=89 Identities=21% Similarity=0.370 Sum_probs=76.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC--------
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-------- 171 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a-------- 171 (198)
|+|||||||||||++++++|+++||+|++++|.+... ..++++++.+|++|+. +.+++.++|+|||++
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~---~~~~ve~v~~Dl~d~~-l~~al~~~D~VIHLAa~~~~~~~ 76 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA---LDPRVDYVCASLRNPV-LQELAGEADAVIHLAPVDTSAPG 76 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc---ccCCceEEEccCCCHH-HHHHhcCCCEEEEcCccCccchh
Confidence 4799999999999999999999999999999876432 2346899999999985 889999999999982
Q ss_pred ----hhH--HHHHHHhCCCCeEEEEccc
Q 029118 172 ----EGF--ISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 172 ----~G~--lldAA~~~GVkRiV~vSS~ 193 (198)
.|+ ++++|+++|+ ||||+||.
T Consensus 77 ~vNv~Gt~nLleAA~~~Gv-RiV~~SS~ 103 (699)
T PRK12320 77 GVGITGLAHVANAAARAGA-RLLFVSQA 103 (699)
T ss_pred hHHHHHHHHHHHHHHHcCC-eEEEEECC
Confidence 122 8999999998 79999986
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.3e-13 Score=113.05 Aligned_cols=97 Identities=20% Similarity=0.131 Sum_probs=78.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhc-CccEEEEcC
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-GVRSIICPS 171 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~-GvDaVIh~a 171 (198)
+++||||||||+||++++++|+++|++|++++|++..... ..+..++++.+|++|++++.+++. ++|.|||++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~a 81 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNA 81 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECC
Confidence 3579999999999999999999999999999998654321 123468999999999999999987 899999962
Q ss_pred ------------------------hhH------HHHHHHhCCCCeEEEEcccce
Q 029118 172 ------------------------EGF------ISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 172 ------------------------~G~------lldAA~~~GVkRiV~vSS~~V 195 (198)
.+. +++++++++.+|||++||.+.
T Consensus 82 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~ 135 (257)
T PRK09291 82 GIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAG 135 (257)
T ss_pred CcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhh
Confidence 011 345566778899999999643
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.7e-13 Score=136.71 Aligned_cols=91 Identities=14% Similarity=0.302 Sum_probs=79.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC--------
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-------- 171 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a-------- 171 (198)
|+|||||||||||++++++|+++|++|++++|+.... ...+++++.+|++|++.+.++++++|+|||++
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~---~~~~v~~v~gDL~D~~~l~~al~~vD~VVHlAa~~~~~~~ 77 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS---WPSSADFIAADIRDATAVESAMTGADVVAHCAWVRGRNDH 77 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh---cccCceEEEeeCCCHHHHHHHHhCCCEEEECCCcccchHH
Confidence 4799999999999999999999999999999975332 22358899999999999999999999999983
Q ss_pred ---hhH--HHHHHHhCCCCeEEEEccc
Q 029118 172 ---EGF--ISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 172 ---~G~--lldAA~~~GVkRiV~vSS~ 193 (198)
.++ ++++|+++|++||||+||.
T Consensus 78 vNv~GT~nLLeAa~~~gvkr~V~iSS~ 104 (854)
T PRK05865 78 INIDGTANVLKAMAETGTGRIVFTSSG 104 (854)
T ss_pred HHHHHHHHHHHHHHHcCCCeEEEECCc
Confidence 122 7899999999999999986
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.4e-13 Score=114.49 Aligned_cols=96 Identities=18% Similarity=0.190 Sum_probs=78.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcC-------ccEEEEcC
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG-------VRSIICPS 171 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~G-------vDaVIh~a 171 (198)
+++++||||||+||++++++|.++|++|++++|+++..... .+++++++|++|+++++++++. +|.|||++
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~a 81 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPI--PGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNNA 81 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccc--CCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEECC
Confidence 45799999999999999999999999999999987654322 4589999999999999999874 69999982
Q ss_pred ----h--------------------hH------HHHHHHhCCCCeEEEEccccee
Q 029118 172 ----E--------------------GF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 172 ----~--------------------G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
. +. +++.+++++.+|||++||...+
T Consensus 82 g~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~ 136 (270)
T PRK06179 82 GVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGF 136 (270)
T ss_pred CCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCcccc
Confidence 0 11 3344677899999999997543
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=3e-13 Score=111.94 Aligned_cols=98 Identities=17% Similarity=0.219 Sum_probs=79.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cCCceEEEEccCCCHHHHHHhhc-------Ccc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GVR 165 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~AL~-------GvD 165 (198)
++++|||||||+||++++++|+++|++|+++.|++++.... .+..++++.+|++|++++.++++ ++|
T Consensus 4 ~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d 83 (258)
T PRK12429 4 GKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGVD 83 (258)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 46899999999999999999999999999999987653211 24568899999999999988876 689
Q ss_pred EEEEcC------------------------hhH------HHHHHHhCCCCeEEEEccccee
Q 029118 166 SIICPS------------------------EGF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 166 aVIh~a------------------------~G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
+|||++ .+. +++++++.++++||++||...+
T Consensus 84 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~ 144 (258)
T PRK12429 84 ILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGL 144 (258)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhc
Confidence 999972 011 4566677889999999997543
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.4e-13 Score=117.48 Aligned_cols=94 Identities=17% Similarity=0.157 Sum_probs=72.6
Q ss_pred EEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc----CccEEEEcC-----
Q 029118 102 VLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR----GVRSIICPS----- 171 (198)
Q Consensus 102 ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~----GvDaVIh~a----- 171 (198)
|||||||||||++++++|+++|+ +|.++.|...... ........+.+|+++.+.++.+.+ ++|+|||++
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~~~~~ 79 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGHK-FLNLADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQGACSDT 79 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCchh-hhhhhheeeeccCcchhHHHHHHhhccCCCCEEEECccccCc
Confidence 69999999999999999999998 6887776543221 111112467889999988887764 899999982
Q ss_pred -------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 172 -------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 -------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.++ ++++|+++++ +|||+||.+||.
T Consensus 80 ~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~v~~SS~~vy~ 119 (314)
T TIGR02197 80 TETDGEYMMENNYQYSKRLLDWCAEKGI-PFIYASSAATYG 119 (314)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHhCC-cEEEEccHHhcC
Confidence 112 7899998887 899999999985
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.6e-13 Score=114.90 Aligned_cols=97 Identities=14% Similarity=0.149 Sum_probs=80.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc-------CccEEEEcC
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIICPS 171 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~-------GvDaVIh~a 171 (198)
+++++||||||+||++++++|+++|++|.++.|++++.......+++++.+|++|++++.++++ ++|.|||++
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~a 82 (273)
T PRK06182 3 KKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNNA 82 (273)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 5789999999999999999999999999999999876544333458999999999999998886 789999972
Q ss_pred ----h--------------------hH------HHHHHHhCCCCeEEEEcccce
Q 029118 172 ----E--------------------GF------ISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 172 ----~--------------------G~------lldAA~~~GVkRiV~vSS~~V 195 (198)
. +. +++.+++.+..|||++||.+.
T Consensus 83 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~ 136 (273)
T PRK06182 83 GYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGG 136 (273)
T ss_pred CcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhh
Confidence 0 11 455677788899999999653
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.7e-13 Score=116.28 Aligned_cols=90 Identities=19% Similarity=0.238 Sum_probs=62.9
Q ss_pred EEcCCChHHHHHHHHHHHCCC--cEEEEEeCCcc--cccc-----------------cCCceEEEEccCCCH------HH
Q 029118 104 VTDGDSDIGQMVILSLIVKRT--RIKALVKDKRN--AMES-----------------FGTYVESMAGDASNK------KF 156 (198)
Q Consensus 104 VTGATGfIG~~Vvr~Ll~~G~--~VralvR~~~~--a~~~-----------------~g~~vevV~GDl~D~------~s 156 (198)
|||||||+|++++++|++++. +|.+++|..+. +.+. ...+++++.||++++ +.
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 799999999999999999987 89999998743 1111 156899999999985 46
Q ss_pred HHHhhcCccEEEEcC-----------------hhH--HHHHHHhCCCCeEEEEccc
Q 029118 157 LKTALRGVRSIICPS-----------------EGF--ISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 157 L~~AL~GvDaVIh~a-----------------~G~--lldAA~~~GVkRiV~vSS~ 193 (198)
+....+.+|+|||++ .|+ +++.|.+...++|+|+||.
T Consensus 81 ~~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa 136 (249)
T PF07993_consen 81 YQELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTA 136 (249)
T ss_dssp HHHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEG
T ss_pred hhccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhccCcceEEeccc
Confidence 667778999999982 233 8899998888899999994
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=5.8e-13 Score=110.72 Aligned_cols=99 Identities=16% Similarity=0.139 Sum_probs=78.6
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhcC-------
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALRG------- 163 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~G------- 163 (198)
..++++|||||||+||++++++|+++|++|+++.|++++..+ ..+..+.++++|++|++.+.++++.
T Consensus 5 ~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 84 (262)
T PRK13394 5 LNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGS 84 (262)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 346789999999999999999999999999999998754321 1234578899999999999888763
Q ss_pred ccEEEEcC------------------------hhH------HHHHH-HhCCCCeEEEEcccce
Q 029118 164 VRSIICPS------------------------EGF------ISNAG-SLKGVQHVILLSQGAV 195 (198)
Q Consensus 164 vDaVIh~a------------------------~G~------lldAA-~~~GVkRiV~vSS~~V 195 (198)
+|+|||++ .+. +++++ ++.++++||++||...
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~ 147 (262)
T PRK13394 85 VDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHS 147 (262)
T ss_pred CCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhh
Confidence 89999972 010 45666 6778999999999744
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.45 E-value=7.2e-13 Score=109.49 Aligned_cols=97 Identities=15% Similarity=0.172 Sum_probs=74.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cCCceEEEEccCCCHHHHHHh-------hcCccE
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTA-------LRGVRS 166 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~A-------L~GvDa 166 (198)
+++|||||||+||++++++|+++|++|+++.|+++..... .+.+++++.+|+.|++++.++ +.++|.
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 81 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLDI 81 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 5799999999999999999999999999999987543211 234688999999999966544 456899
Q ss_pred EEEcC------------------------hhH--H----HHHHHhCCCCeEEEEccccee
Q 029118 167 IICPS------------------------EGF--I----SNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 167 VIh~a------------------------~G~--l----ldAA~~~GVkRiV~vSS~~Vy 196 (198)
|||++ .+. + ++.+++.++++||++||.+.+
T Consensus 82 vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~ 141 (255)
T TIGR01963 82 LVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGL 141 (255)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhc
Confidence 99972 011 2 333467789999999997543
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=7.1e-13 Score=108.01 Aligned_cols=100 Identities=13% Similarity=0.123 Sum_probs=78.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc----cccCCceEEEEccCCCHHHHHHhhc-------CccE
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM----ESFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~----~~~g~~vevV~GDl~D~~sL~~AL~-------GvDa 166 (198)
+++++|||||||+||++++++|+++|++|+++.|++.+.. ......++++.+|+.|.+++.++++ ++|+
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 85 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA 85 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence 4679999999999999999999999999999999875532 1223457889999999999988876 6899
Q ss_pred EEEcCh------------------------hH--HHHH----HHhCCCCeEEEEcccceec
Q 029118 167 IICPSE------------------------GF--ISNA----GSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 167 VIh~a~------------------------G~--lldA----A~~~GVkRiV~vSS~~Vy~ 197 (198)
|||++. +. ++++ +++.++++||++||.+.+.
T Consensus 86 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~ 146 (239)
T PRK12828 86 LVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALK 146 (239)
T ss_pred EEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhcc
Confidence 999720 01 3333 3467899999999987653
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=4.9e-13 Score=113.18 Aligned_cols=96 Identities=14% Similarity=0.246 Sum_probs=76.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc---ccCCceEEEEccCCCHHHHHHhhc-------CccEEEE
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~---~~g~~vevV~GDl~D~~sL~~AL~-------GvDaVIh 169 (198)
+++|||||||+||++++++|+++|++|.+++|+++.... ..+.+++++.+|++|++++.++++ ++|+|||
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 82 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS 82 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 579999999999999999999999999999998755432 234568999999999999888764 5799999
Q ss_pred cC------------------------hhH--HHHHH----HhCCCCeEEEEcccce
Q 029118 170 PS------------------------EGF--ISNAG----SLKGVQHVILLSQGAV 195 (198)
Q Consensus 170 ~a------------------------~G~--lldAA----~~~GVkRiV~vSS~~V 195 (198)
++ .++ +++++ ++++.++||++||.+.
T Consensus 83 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~ 138 (276)
T PRK06482 83 NAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGG 138 (276)
T ss_pred CCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCccc
Confidence 72 011 44554 6778899999999754
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.44 E-value=3.6e-13 Score=113.34 Aligned_cols=91 Identities=15% Similarity=0.088 Sum_probs=67.2
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC-----h----
Q 029118 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-----E---- 172 (198)
Q Consensus 102 ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a-----~---- 172 (198)
|||||||||||++++++|+++|++|++++|++.+........+ .|+.+ ..+.+++.++|+|||++ .
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~D~Vvh~a~~~~~~~~~~ 75 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKWEGY----KPWAP-LAESEALEGADAVINLAGEPIADKRWT 75 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccceee----ecccc-cchhhhcCCCCEEEECCCCCcccccCC
Confidence 6999999999999999999999999999998865432211111 12222 55678899999999982 0
Q ss_pred -------------hH--HHHHHHhCCCC--eEEEEcccceec
Q 029118 173 -------------GF--ISNAGSLKGVQ--HVILLSQGAVVC 197 (198)
Q Consensus 173 -------------G~--lldAA~~~GVk--RiV~vSS~~Vy~ 197 (198)
++ ++++|++++++ +||+.|+.++|.
T Consensus 76 ~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg 117 (292)
T TIGR01777 76 EERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYG 117 (292)
T ss_pred HHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeC
Confidence 01 78899999985 566667777775
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=6.3e-13 Score=109.58 Aligned_cols=100 Identities=16% Similarity=0.178 Sum_probs=78.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc---c--CCceEEEEccCCCHHHHHHhhc-------Ccc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F--GTYVESMAGDASNKKFLKTALR-------GVR 165 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~---~--g~~vevV~GDl~D~~sL~~AL~-------GvD 165 (198)
.++++|||||||+||++++++|+++|++|++++|++.+.... . +..+.++.+|+.|++++.++++ .+|
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 83 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVD 83 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 456899999999999999999999999999999987653221 1 2457899999999999998875 469
Q ss_pred EEEEcC-----h--------------------hH------HHHHHHhCCCCeEEEEcccceec
Q 029118 166 SIICPS-----E--------------------GF------ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 166 aVIh~a-----~--------------------G~------lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
+|||++ . ++ +++++++.+.++||++||.+.+.
T Consensus 84 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~ 146 (251)
T PRK07231 84 ILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLR 146 (251)
T ss_pred EEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcC
Confidence 999972 0 00 34555567889999999987653
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=1e-12 Score=111.88 Aligned_cols=98 Identities=11% Similarity=0.156 Sum_probs=77.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc---ccCCceEEEEccCCCHHHHHHhhc-------CccEEE
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSII 168 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~---~~g~~vevV~GDl~D~~sL~~AL~-------GvDaVI 168 (198)
++++|||||+|+||++++++|+++|++|++++|++++... ..+.++.++.+|++|++++.++++ ++|+||
T Consensus 4 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~vv 83 (277)
T PRK06180 4 MKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVLV 83 (277)
T ss_pred CCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence 4689999999999999999999999999999998765432 223468899999999999988876 579999
Q ss_pred EcC----h--------------------hH--HHHH----HHhCCCCeEEEEccccee
Q 029118 169 CPS----E--------------------GF--ISNA----GSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 169 h~a----~--------------------G~--lldA----A~~~GVkRiV~vSS~~Vy 196 (198)
|++ . |+ ++++ +++.+..+||++||.+.+
T Consensus 84 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~ 141 (277)
T PRK06180 84 NNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGL 141 (277)
T ss_pred ECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEeccccc
Confidence 982 0 11 2333 456678899999997553
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.6e-12 Score=106.08 Aligned_cols=99 Identities=17% Similarity=0.255 Sum_probs=76.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc-------cccCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------ESFGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~-------~~~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
++++||||||||+||++++++|+++|++|.++.|+..... ...+.+++++.+|+.|++++.++++ +
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~ 84 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGR 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCC
Confidence 4568999999999999999999999999988887654321 1234568899999999999988875 5
Q ss_pred ccEEEEcC------h------------------hH--HHHH----HHhCCCCeEEEEccccee
Q 029118 164 VRSIICPS------E------------------GF--ISNA----GSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 164 vDaVIh~a------~------------------G~--lldA----A~~~GVkRiV~vSS~~Vy 196 (198)
+|.|||++ . +. ++++ +++.++++||++||.+.+
T Consensus 85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~ 147 (249)
T PRK12825 85 IDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGL 147 (249)
T ss_pred CCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccC
Confidence 69999972 0 00 2333 467789999999998664
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.7e-12 Score=107.30 Aligned_cols=98 Identities=14% Similarity=0.157 Sum_probs=78.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-----cCCceEEEEccCCCHHHHHHhhc-------Ccc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTALR-------GVR 165 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-----~g~~vevV~GDl~D~~sL~~AL~-------GvD 165 (198)
.++++|||||+|+||++++++|+++|++|.++.|+.+..... .+..++++.+|++|++++.++++ .+|
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id 83 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLD 83 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 457999999999999999999999999999999987543211 13457899999999999998875 689
Q ss_pred EEEEcC-------------h-----------hH------HHHHHHhCCCCeEEEEcccce
Q 029118 166 SIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 166 aVIh~a-------------~-----------G~------lldAA~~~GVkRiV~vSS~~V 195 (198)
+|||++ + +. +++++++++.++||++||.+.
T Consensus 84 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~ 143 (252)
T PRK06138 84 VLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLA 143 (252)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhh
Confidence 999972 0 11 345556778899999999744
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=1e-12 Score=112.13 Aligned_cols=98 Identities=13% Similarity=0.123 Sum_probs=79.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc--------CccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--------GVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~--------GvDaVIh~ 170 (198)
++++|||||+|+||++++++|.++|++|.+++|+++........+++++.+|++|++++.++++ .+|.|||+
T Consensus 4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~~ 83 (277)
T PRK05993 4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALFNN 83 (277)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEEC
Confidence 4689999999999999999999999999999998876544333468899999999998887765 46999987
Q ss_pred C------------------------hh------HHHHHHHhCCCCeEEEEccccee
Q 029118 171 S------------------------EG------FISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 171 a------------------------~G------~lldAA~~~GVkRiV~vSS~~Vy 196 (198)
+ .| .+++++++.+..+||++||...+
T Consensus 84 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~ 139 (277)
T PRK05993 84 GAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGL 139 (277)
T ss_pred CCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhc
Confidence 2 01 15666778889999999997543
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.41 E-value=3.3e-12 Score=105.24 Aligned_cols=98 Identities=17% Similarity=0.247 Sum_probs=78.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc---CccEEEEcC-h
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR---GVRSIICPS-E 172 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~---GvDaVIh~a-~ 172 (198)
..+++|||||||+||++++++|+++|+ +|++++|++++... .+.+++++.+|+.|++.+.++++ .+|+|||.+ .
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~ 83 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-LGPRVVPLQLDVTDPASVAAAAEAASDVTILVNNAGI 83 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence 456899999999999999999999999 99999998876543 45678999999999999998886 479999972 0
Q ss_pred ------------------------hH--HHHH----HHhCCCCeEEEEccccee
Q 029118 173 ------------------------GF--ISNA----GSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 173 ------------------------G~--lldA----A~~~GVkRiV~vSS~~Vy 196 (198)
+. ++++ +++.+..+||++||...+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~ 137 (238)
T PRK08264 84 FRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSW 137 (238)
T ss_pred CCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhc
Confidence 00 2333 445678999999997654
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.9e-12 Score=106.44 Aligned_cols=99 Identities=19% Similarity=0.211 Sum_probs=77.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhc-------Cc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GV 164 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~-------Gv 164 (198)
..++||||||+|++|++++++|+++|++|++++|++++... ..+..++++.+|+.|++++.++++ .+
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 84 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL 84 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 45789999999999999999999999999999998654321 123458899999999999999886 67
Q ss_pred cEEEEcC-------------h-----------hH--HHHH----HHhCCCCeEEEEccccee
Q 029118 165 RSIICPS-------------E-----------GF--ISNA----GSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 165 DaVIh~a-------------~-----------G~--lldA----A~~~GVkRiV~vSS~~Vy 196 (198)
|+|||++ . +. ++++ +++.+.++||++||...+
T Consensus 85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~ 146 (251)
T PRK12826 85 DILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGP 146 (251)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhh
Confidence 9999982 0 00 3333 356788999999997654
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.39 E-value=2.6e-12 Score=104.90 Aligned_cols=97 Identities=14% Similarity=0.229 Sum_probs=76.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhcC-------c
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALRG-------V 164 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~G-------v 164 (198)
++++||||||+|+||++++++|+++|++|.++.|++.+... ..+..++++.+|+.|++++.+++++ +
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL 83 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 34689999999999999999999999999999998765321 1244688999999999999888765 5
Q ss_pred cEEEEcC----h--------------------hH--HHHHH----HhCCCCeEEEEcccc
Q 029118 165 RSIICPS----E--------------------GF--ISNAG----SLKGVQHVILLSQGA 194 (198)
Q Consensus 165 DaVIh~a----~--------------------G~--lldAA----~~~GVkRiV~vSS~~ 194 (198)
|+|||++ . +. +++++ .+.++++||++||.+
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~ 143 (246)
T PRK05653 84 DILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVS 143 (246)
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHH
Confidence 9999972 0 00 23333 567889999999964
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.7e-12 Score=125.54 Aligned_cols=102 Identities=15% Similarity=0.189 Sum_probs=79.6
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCC---cEEEEEeCCccc--cccc-------------------------CCceE
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT---RIKALVKDKRNA--MESF-------------------------GTYVE 145 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~---~VralvR~~~~a--~~~~-------------------------g~~ve 145 (198)
-...++|||||||||+|.+++++|++.+. +|.+++|..... .+.+ ...++
T Consensus 116 f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~ 195 (605)
T PLN02503 116 FLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLV 195 (605)
T ss_pred hhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEE
Confidence 34578999999999999999999998765 679999965321 1110 13588
Q ss_pred EEEccCCCH------HHHHHhhcCccEEEEcC-----------------hhH--HHHHHHhC-CCCeEEEEcccceec
Q 029118 146 SMAGDASNK------KFLKTALRGVRSIICPS-----------------EGF--ISNAGSLK-GVQHVILLSQGAVVC 197 (198)
Q Consensus 146 vV~GDl~D~------~sL~~AL~GvDaVIh~a-----------------~G~--lldAA~~~-GVkRiV~vSS~~Vy~ 197 (198)
++.||++++ +..+.+++++|.|||++ .|+ ++++|++. ++++|||+||..||+
T Consensus 196 ~v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG 273 (605)
T PLN02503 196 PVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNG 273 (605)
T ss_pred EEEeeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeec
Confidence 999999997 46666778899999982 122 78999776 589999999999886
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=2.7e-12 Score=106.62 Aligned_cols=98 Identities=13% Similarity=0.081 Sum_probs=76.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc--------cCCceEEEEccCCCHHHHHHhhcC------
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--------FGTYVESMAGDASNKKFLKTALRG------ 163 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~--------~g~~vevV~GDl~D~~sL~~AL~G------ 163 (198)
.++++|||||+|+||++++++|+++|++|+++.|++++..+. .+..+.++++|++|++++.++++.
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 82 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG 82 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 457899999999999999999999999999999987653211 123467789999999999888864
Q ss_pred -ccEEEEcCh---------------------------hH------HHHHHHhCCCCeEEEEcccce
Q 029118 164 -VRSIICPSE---------------------------GF------ISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 164 -vDaVIh~a~---------------------------G~------lldAA~~~GVkRiV~vSS~~V 195 (198)
+|.|||++. +. +++++++.+.+|||++||...
T Consensus 83 ~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~ 148 (256)
T PRK09186 83 KIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYG 148 (256)
T ss_pred CccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhh
Confidence 799998730 00 345566678899999999643
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=3.7e-12 Score=108.17 Aligned_cols=73 Identities=12% Similarity=0.061 Sum_probs=61.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cCCceEEEEccCCCHHHHHHhhc-------Cc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~AL~-------Gv 164 (198)
.++++|||||+|+||++++++|+++|++|.++.|+.+..... .+..+.++.+|++|++++.++++ .+
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i 84 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAV 84 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 457899999999999999999999999999999976543211 13457889999999999998886 47
Q ss_pred cEEEEc
Q 029118 165 RSIICP 170 (198)
Q Consensus 165 DaVIh~ 170 (198)
|.|||+
T Consensus 85 d~vi~~ 90 (287)
T PRK06194 85 HLLFNN 90 (287)
T ss_pred CEEEEC
Confidence 999997
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=4.1e-12 Score=106.18 Aligned_cols=97 Identities=16% Similarity=0.217 Sum_probs=77.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc---ccCCceEEEEccCCCHHHHHHhhc-------CccEEEE
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~---~~g~~vevV~GDl~D~~sL~~AL~-------GvDaVIh 169 (198)
|+|+||||||+||.+++++|+++|++|.++.|++++... ..+.+++++.+|++|.+++.++++ ++|.|||
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~ 80 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVN 80 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 579999999999999999999999999999998765432 234568899999999999988774 7899998
Q ss_pred cC---h----------------------hH------HHHHHHhCCCCeEEEEccccee
Q 029118 170 PS---E----------------------GF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 170 ~a---~----------------------G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
++ . ++ ++.++++.+..+||++||.+.+
T Consensus 81 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~ 138 (248)
T PRK10538 81 NAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGS 138 (248)
T ss_pred CCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccC
Confidence 72 0 11 3455667788999999997643
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=3e-12 Score=110.79 Aligned_cols=102 Identities=16% Similarity=0.200 Sum_probs=79.8
Q ss_pred cccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc----c---c-CCceEEEEccCCCHHHHHHhhc---
Q 029118 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME----S---F-GTYVESMAGDASNKKFLKTALR--- 162 (198)
Q Consensus 94 ~~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~----~---~-g~~vevV~GDl~D~~sL~~AL~--- 162 (198)
..+..+++||||||+|+||++++++|+++|++|+++.|+.++... . . +..++++.+|++|.++++++++
T Consensus 11 ~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~ 90 (306)
T PRK06197 11 IPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALR 90 (306)
T ss_pred cccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHH
Confidence 345567899999999999999999999999999999998654321 1 1 2458899999999999988764
Q ss_pred ----CccEEEEcC-----------h-----------hH------HHHHHHhCCCCeEEEEcccce
Q 029118 163 ----GVRSIICPS-----------E-----------GF------ISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 163 ----GvDaVIh~a-----------~-----------G~------lldAA~~~GVkRiV~vSS~~V 195 (198)
.+|+|||++ + +. +++.+++.+..|||++||.+.
T Consensus 91 ~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~ 155 (306)
T PRK06197 91 AAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGH 155 (306)
T ss_pred hhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHH
Confidence 579999972 0 10 456666777789999999753
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.4e-12 Score=116.54 Aligned_cols=95 Identities=20% Similarity=0.327 Sum_probs=71.9
Q ss_pred EEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcccc---ccc-----CCce----EEEEccCCCHHHHHHhhc--CccE
Q 029118 102 VLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAM---ESF-----GTYV----ESMAGDASNKKFLKTALR--GVRS 166 (198)
Q Consensus 102 ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~---~~~-----g~~v----evV~GDl~D~~sL~~AL~--GvDa 166 (198)
||||||+|.||+.++++|++.+. +++++.|+..+.. ..+ .+++ ..+.||++|++.+..+++ ++|.
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi 80 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI 80 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence 79999999999999999999884 6999998875431 112 1234 356999999999999999 9999
Q ss_pred EEEcC--------------------hhH--HHHHHHhCCCCeEEEEccccee
Q 029118 167 IICPS--------------------EGF--ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 167 VIh~a--------------------~G~--lldAA~~~GVkRiV~vSS~~Vy 196 (198)
|||.+ .|+ ++++|.+++|+|||++||--+.
T Consensus 81 VfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKAv 132 (293)
T PF02719_consen 81 VFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKAV 132 (293)
T ss_dssp EEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGCS
T ss_pred EEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccccC
Confidence 99982 233 8999999999999999996543
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.38 E-value=3.1e-12 Score=111.97 Aligned_cols=82 Identities=12% Similarity=0.122 Sum_probs=63.2
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc--CccEEEEcC--
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPS-- 171 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~--GvDaVIh~a-- 171 (198)
....++|||||||||||++++++|+++|++|++.. +|+.|.+.+...++ ++|+|||++
T Consensus 6 ~~~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~------------------~~~~~~~~v~~~l~~~~~D~ViH~Aa~ 67 (298)
T PLN02778 6 GSATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS------------------GRLENRASLEADIDAVKPTHVFNAAGV 67 (298)
T ss_pred CCCCCeEEEECCCCHHHHHHHHHHHhCCCEEEEec------------------CccCCHHHHHHHHHhcCCCEEEECCcc
Confidence 34457899999999999999999999999987432 34566677777776 789999982
Q ss_pred ----h-----------------hH--HHHHHHhCCCCeEEEEccccee
Q 029118 172 ----E-----------------GF--ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 172 ----~-----------------G~--lldAA~~~GVkRiV~vSS~~Vy 196 (198)
. ++ ++++|++.|+++ |++||.+||
T Consensus 68 ~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~~-v~~sS~~vy 114 (298)
T PLN02778 68 TGRPNVDWCESHKVETIRANVVGTLTLADVCRERGLVL-TNYATGCIF 114 (298)
T ss_pred cCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCE-EEEecceEe
Confidence 0 11 789999999975 556666776
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.38 E-value=4.2e-12 Score=104.84 Aligned_cols=99 Identities=15% Similarity=0.239 Sum_probs=78.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cCCceEEEEccCCCHHHHHHhhc-------Cc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~AL~-------Gv 164 (198)
.++++|||||||+||++++++|+++|++|.+++|+....... .+.+++++.+|++|.++++++++ ++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 81 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV 81 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 367899999999999999999999999999999987543211 23568999999999999988875 58
Q ss_pred cEEEEcC-------------h-----------hH--H----HHHHHhCCCCeEEEEccccee
Q 029118 165 RSIICPS-------------E-----------GF--I----SNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 165 DaVIh~a-------------~-----------G~--l----ldAA~~~GVkRiV~vSS~~Vy 196 (198)
|.|||++ . +. + ++++++.+.++||++||.+.+
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~ 143 (250)
T TIGR03206 82 DVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAAR 143 (250)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhc
Confidence 9999972 0 00 2 333446788999999998665
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=6.6e-12 Score=102.97 Aligned_cols=93 Identities=18% Similarity=0.217 Sum_probs=76.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc------CccEEEEcC-
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR------GVRSIICPS- 171 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~------GvDaVIh~a- 171 (198)
.+++|||||||+||++++++|+++|++|.++.|++... .+ .+++.+|++|++++.++++ ++|.|||++
T Consensus 3 ~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~---~~--~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~ag 77 (234)
T PRK07577 3 SRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD---FP--GELFACDLADIEQTAATLAQINEIHPVDAIVNNVG 77 (234)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc---cC--ceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECCC
Confidence 46899999999999999999999999999999987652 12 3688999999999988876 789999972
Q ss_pred ------------h-----------hH------HHHHHHhCCCCeEEEEccccee
Q 029118 172 ------------E-----------GF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 172 ------------~-----------G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
. +. ++.++++++..+||++||.++|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~ 131 (234)
T PRK07577 78 IALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIF 131 (234)
T ss_pred CCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcccccc
Confidence 0 11 3456677889999999998765
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=5.2e-12 Score=107.67 Aligned_cols=103 Identities=16% Similarity=0.208 Sum_probs=78.3
Q ss_pred cccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhc-----
Q 029118 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR----- 162 (198)
Q Consensus 94 ~~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~----- 162 (198)
|.+..++++|||||+|+||++++++|+++|++|.++.|+.+.... ..+..++++.+|++|++++.++++
T Consensus 5 ~~~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (274)
T PRK07775 5 EPHPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEA 84 (274)
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence 345667899999999999999999999999999999987654321 123467889999999999988775
Q ss_pred --CccEEEEcC-------------h-----------hH--HHHH----HHhCCCCeEEEEccccee
Q 029118 163 --GVRSIICPS-------------E-----------GF--ISNA----GSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 163 --GvDaVIh~a-------------~-----------G~--lldA----A~~~GVkRiV~vSS~~Vy 196 (198)
++|+|||++ . ++ ++++ +.+.+..+||++||...|
T Consensus 85 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~ 150 (274)
T PRK07775 85 LGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVAL 150 (274)
T ss_pred cCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhc
Confidence 579999972 0 01 2233 345667899999997654
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.37 E-value=8e-12 Score=102.08 Aligned_cols=97 Identities=18% Similarity=0.257 Sum_probs=74.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc-------cccCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------ESFGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~-------~~~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
.++++|||||||+||++++++|+++|++|+++.|++.+.. ...+..+.++.+|++|++++.++++ +
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4578999999999999999999999999999988764311 1123467889999999999988775 6
Q ss_pred ccEEEEcC-------------h-----------hH--HH----HHHHhCCCCeEEEEcccc
Q 029118 164 VRSIICPS-------------E-----------GF--IS----NAGSLKGVQHVILLSQGA 194 (198)
Q Consensus 164 vDaVIh~a-------------~-----------G~--ll----dAA~~~GVkRiV~vSS~~ 194 (198)
+|+|||++ . +. ++ +++.+.+.++||++||..
T Consensus 84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~ 144 (248)
T PRK05557 84 VDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVV 144 (248)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccc
Confidence 79999972 0 01 23 334456788999999963
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=4.4e-12 Score=104.22 Aligned_cols=98 Identities=20% Similarity=0.286 Sum_probs=75.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc---cC--CceEEEEccCCCHHHHHHhhc-------Ccc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG--TYVESMAGDASNKKFLKTALR-------GVR 165 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~---~g--~~vevV~GDl~D~~sL~~AL~-------GvD 165 (198)
.+++|+||||||+||++++++|+++|++|++++|++.+.... .. .+++++.+|++|++++.++++ ++|
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 84 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLD 84 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 357899999999999999999999999999999988653221 11 458899999999999988876 789
Q ss_pred EEEEcC----h--------------------hH--HHHHHH---hCCCCeEEEEcccce
Q 029118 166 SIICPS----E--------------------GF--ISNAGS---LKGVQHVILLSQGAV 195 (198)
Q Consensus 166 aVIh~a----~--------------------G~--lldAA~---~~GVkRiV~vSS~~V 195 (198)
+|||++ . +. +++++. ..+.++||++||...
T Consensus 85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~ 143 (237)
T PRK07326 85 VLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAG 143 (237)
T ss_pred EEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhh
Confidence 999972 0 00 333432 246689999999754
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=6.4e-12 Score=103.84 Aligned_cols=98 Identities=18% Similarity=0.252 Sum_probs=77.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhc-------Cc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GV 164 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~-------Gv 164 (198)
..+++|||||+|+||++++++|+++|++|++++|++.+..+ ..+.+++++.+|++|++++.++++ ++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI 85 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence 35789999999999999999999999999999998754321 123468899999999999998886 78
Q ss_pred cEEEEcC----h--------------------hH--HHH----HHHhCCCCeEEEEcccce
Q 029118 165 RSIICPS----E--------------------GF--ISN----AGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 165 DaVIh~a----~--------------------G~--lld----AA~~~GVkRiV~vSS~~V 195 (198)
|+|||++ . +. +++ .+.+.+.+++|++||...
T Consensus 86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~ 146 (239)
T PRK07666 86 DILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAG 146 (239)
T ss_pred cEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhh
Confidence 9999972 0 00 233 334678899999999654
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=3.3e-12 Score=103.80 Aligned_cols=71 Identities=13% Similarity=0.107 Sum_probs=60.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccccc--CCceEEEEccCCCHHHHHHhhc---CccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTALR---GVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~--g~~vevV~GDl~D~~sL~~AL~---GvDaVIh~ 170 (198)
++++|||||+|+||++++++|+++ ++|.++.|++....... ...++++++|++|++.+.++++ ++|+|||+
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ 78 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHN 78 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEEC
Confidence 468999999999999999999999 99999999875532211 2358899999999999999987 58999997
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=4.6e-12 Score=107.61 Aligned_cols=98 Identities=14% Similarity=0.192 Sum_probs=77.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc---cccCCceEEEEccCCCHHHHHHhhc-------CccEEE
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALR-------GVRSII 168 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~---~~~g~~vevV~GDl~D~~sL~~AL~-------GvDaVI 168 (198)
+++||||||+|+||++++++|+++|++|++++|+++... ...+..+.++++|++|++++.++++ ++|+||
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi 82 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV 82 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 468999999999999999999999999999999876542 2234468889999999999887765 569999
Q ss_pred EcC----h--------------------hH------HHHHHHhCCCCeEEEEccccee
Q 029118 169 CPS----E--------------------GF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 169 h~a----~--------------------G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
|++ . ++ ++..+++.+.++||++||.+.+
T Consensus 83 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~ 140 (275)
T PRK08263 83 NNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGI 140 (275)
T ss_pred ECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhc
Confidence 982 0 11 2333467788999999997654
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=8.1e-12 Score=103.52 Aligned_cols=98 Identities=13% Similarity=0.197 Sum_probs=74.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc-c------cccCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-M------ESFGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a-~------~~~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
.++++|||||||+||++++++|+++|++|+++.|+.... . ...+.++.++.+|++|++.+.++++ +
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG 84 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 457899999999999999999999999999999975421 1 1123457889999999999988775 6
Q ss_pred ccEEEEcC------------------hhH--HHHHHHhC--CCCeEEEEcccce
Q 029118 164 VRSIICPS------------------EGF--ISNAGSLK--GVQHVILLSQGAV 195 (198)
Q Consensus 164 vDaVIh~a------------------~G~--lldAA~~~--GVkRiV~vSS~~V 195 (198)
+|+|||++ .++ +++++... .-.+||++||.++
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~ 138 (248)
T PRK07806 85 LDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQA 138 (248)
T ss_pred CcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchh
Confidence 89999872 011 56666543 2359999999543
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=6.3e-12 Score=104.04 Aligned_cols=98 Identities=16% Similarity=0.224 Sum_probs=74.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEE-EeCCccccc------ccCCceEEEEccCCCHHHHHHhhc-------Cc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GV 164 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~Vral-vR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~-------Gv 164 (198)
++++|||||+|+||++++++|+++|++|+++ +|+..+..+ ..+.++.++.+|++|++++.++++ ++
T Consensus 4 ~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (250)
T PRK08063 4 GKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGRL 83 (250)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999999999999999999998874 676643211 124568899999999999988876 57
Q ss_pred cEEEEcC-------------h-----------hH--H----HHHHHhCCCCeEEEEccccee
Q 029118 165 RSIICPS-------------E-----------GF--I----SNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 165 DaVIh~a-------------~-----------G~--l----ldAA~~~GVkRiV~vSS~~Vy 196 (198)
|+|||.+ . +. + ++++++.+.++||++||.+.+
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~ 145 (250)
T PRK08063 84 DVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSI 145 (250)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhc
Confidence 9999972 0 11 2 333445677899999997553
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=4.6e-12 Score=104.80 Aligned_cols=98 Identities=15% Similarity=0.134 Sum_probs=77.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cCCceEEEEccCCCHHHHHHhhc-------Ccc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GVR 165 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~AL~-------GvD 165 (198)
++++|||||+|+||++++++|+++|++|+++.|++++.... .+.++.++.+|++|++++.++++ .+|
T Consensus 6 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 85 (241)
T PRK07454 6 MPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCPD 85 (241)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 57899999999999999999999999999999987653221 23468899999999999888875 479
Q ss_pred EEEEcC-------------h-----------hH------HHHHHHhCCCCeEEEEccccee
Q 029118 166 SIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 166 aVIh~a-------------~-----------G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
.|||++ . +. +++.+++.+..+||++||...+
T Consensus 86 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~ 146 (241)
T PRK07454 86 VLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAAR 146 (241)
T ss_pred EEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhC
Confidence 999972 0 11 2344456677899999998664
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.5e-11 Score=100.95 Aligned_cols=99 Identities=19% Similarity=0.246 Sum_probs=75.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc----cc------cccCCceEEEEccCCCHHHHHHhhc-----
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN----AM------ESFGTYVESMAGDASNKKFLKTALR----- 162 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~----a~------~~~g~~vevV~GDl~D~~sL~~AL~----- 162 (198)
.++++|||||+|+||++++++|+++|++|++++|...+ .. ...+..++++.+|+.|++++.++++
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (249)
T PRK12827 5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEE 84 (249)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 45789999999999999999999999999998764321 11 1123468899999999999988873
Q ss_pred --CccEEEEcC---h---------------------hH--HHHHHH-----hCCCCeEEEEccccee
Q 029118 163 --GVRSIICPS---E---------------------GF--ISNAGS-----LKGVQHVILLSQGAVV 196 (198)
Q Consensus 163 --GvDaVIh~a---~---------------------G~--lldAA~-----~~GVkRiV~vSS~~Vy 196 (198)
++|+|||++ . +. +++++. +.+.++||++||.+.+
T Consensus 85 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~ 151 (249)
T PRK12827 85 FGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGV 151 (249)
T ss_pred hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhc
Confidence 689999972 0 11 455555 5788999999997654
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=9.2e-12 Score=103.36 Aligned_cols=98 Identities=14% Similarity=0.175 Sum_probs=75.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc-cccCCceEEEEccCCCHHHHHHhhc-----------CccE
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-ESFGTYVESMAGDASNKKFLKTALR-----------GVRS 166 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~-~~~g~~vevV~GDl~D~~sL~~AL~-----------GvDa 166 (198)
++++|||||||+||++++++|+++|++|.+++|+..+.. ...+.+++++++|++|++++.++++ ..|.
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLAAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVL 80 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhhhhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceE
Confidence 358999999999999999999999999999999865422 2234568899999999999988543 3578
Q ss_pred EEEcC-------------------------hhH------HHHHHHhCCCCeEEEEccccee
Q 029118 167 IICPS-------------------------EGF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 167 VIh~a-------------------------~G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
+||++ .+. +++.+.+.+..+||++||.+.+
T Consensus 81 ~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~ 141 (243)
T PRK07023 81 LINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAAR 141 (243)
T ss_pred EEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhc
Confidence 88861 011 2344455677899999997654
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=8.9e-12 Score=104.37 Aligned_cols=101 Identities=19% Similarity=0.247 Sum_probs=76.9
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhc-------
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR------- 162 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~------- 162 (198)
+...+++|||||+|+||++++++|+++|++|.++.|+.++... ..+.++.++.+|++|++++.++++
T Consensus 9 ~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~ 88 (259)
T PRK08213 9 DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFG 88 (259)
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 3456799999999999999999999999999999998654321 123457889999999999977664
Q ss_pred CccEEEEcC-------------h-----------hH--HHHHHH-----hCCCCeEEEEccccee
Q 029118 163 GVRSIICPS-------------E-----------GF--ISNAGS-----LKGVQHVILLSQGAVV 196 (198)
Q Consensus 163 GvDaVIh~a-------------~-----------G~--lldAA~-----~~GVkRiV~vSS~~Vy 196 (198)
.+|+|||++ . +. +++++. +++..+||++||.+.+
T Consensus 89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~ 153 (259)
T PRK08213 89 HVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGL 153 (259)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhc
Confidence 579999982 0 11 455443 3478899999996543
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=6.2e-12 Score=106.30 Aligned_cols=98 Identities=18% Similarity=0.120 Sum_probs=76.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccccc--CCceEEEEccCCCHHHHHHhhc-------CccEEE
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTALR-------GVRSII 168 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~--g~~vevV~GDl~D~~sL~~AL~-------GvDaVI 168 (198)
.++++|||||||.||++++++|+++|++|+++.|++++..... -..++++.+|++|++++.++++ ++|.+|
T Consensus 4 ~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li 83 (273)
T PRK07825 4 RGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLV 83 (273)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 3578999999999999999999999999999999876543211 1247899999999999876663 579999
Q ss_pred EcC------------------------hhH------HHHHHHhCCCCeEEEEcccce
Q 029118 169 CPS------------------------EGF------ISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 169 h~a------------------------~G~------lldAA~~~GVkRiV~vSS~~V 195 (198)
|++ .+. ++..+++.+..|||++||.+.
T Consensus 84 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~ 140 (273)
T PRK07825 84 NNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAG 140 (273)
T ss_pred ECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccc
Confidence 872 000 345567788999999999754
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=8.4e-12 Score=104.58 Aligned_cols=96 Identities=18% Similarity=0.126 Sum_probs=75.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc----cCCceEEEEccCCCHHHHHHhhc--------CccE
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES----FGTYVESMAGDASNKKFLKTALR--------GVRS 166 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~----~g~~vevV~GDl~D~~sL~~AL~--------GvDa 166 (198)
++++|||||||+||++++++|+++|++|.++.|++++..+. .+..++++.+|++|.+.+.++++ .+|+
T Consensus 1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~ 80 (260)
T PRK08267 1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDV 80 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCE
Confidence 46899999999999999999999999999999988654321 13568999999999999988875 4599
Q ss_pred EEEcC-------------h-----------hH--HHHH----HHhCCCCeEEEEcccc
Q 029118 167 IICPS-------------E-----------GF--ISNA----GSLKGVQHVILLSQGA 194 (198)
Q Consensus 167 VIh~a-------------~-----------G~--lldA----A~~~GVkRiV~vSS~~ 194 (198)
|||++ . +. ++++ ++..+..+||++||..
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~ 138 (260)
T PRK08267 81 LFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSAS 138 (260)
T ss_pred EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchh
Confidence 99972 0 01 2333 3456778999999964
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=9.5e-12 Score=105.30 Aligned_cols=97 Identities=13% Similarity=0.170 Sum_probs=73.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc--------cCCceEEEEccCCCHHHHHH------hhcCc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--------FGTYVESMAGDASNKKFLKT------ALRGV 164 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~--------~g~~vevV~GDl~D~~sL~~------AL~Gv 164 (198)
++++|||||||+||++++++|+++|++|++++|+++..... .+..++++.+|++|++++.+ .+..+
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~i 82 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGRI 82 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCCe
Confidence 45799999999999999999999999999999987543211 12468999999999998775 12357
Q ss_pred cEEEEcC-------------h-----------hH------HHHHHHhCCCCeEEEEcccce
Q 029118 165 RSIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 165 DaVIh~a-------------~-----------G~------lldAA~~~GVkRiV~vSS~~V 195 (198)
|.|||++ . ++ +++++++.+..+||++||.+.
T Consensus 83 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~ 143 (280)
T PRK06914 83 DLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISG 143 (280)
T ss_pred eEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccc
Confidence 9999972 0 11 233356778899999999643
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.2e-11 Score=103.34 Aligned_cols=100 Identities=14% Similarity=0.198 Sum_probs=77.1
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhcC------
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALRG------ 163 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~G------ 163 (198)
+..++++|||||+|+||++++++|+++|++|.++.|++++... ..+..+.++.+|++|++++.++++.
T Consensus 7 ~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 86 (255)
T PRK07523 7 DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIG 86 (255)
T ss_pred CCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 3557899999999999999999999999999999998754321 1134578899999999999888754
Q ss_pred -ccEEEEcC-------------h-----------hH--HHHHH----HhCCCCeEEEEcccce
Q 029118 164 -VRSIICPS-------------E-----------GF--ISNAG----SLKGVQHVILLSQGAV 195 (198)
Q Consensus 164 -vDaVIh~a-------------~-----------G~--lldAA----~~~GVkRiV~vSS~~V 195 (198)
+|+|||++ + +. +++++ ++.+..+||++||...
T Consensus 87 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~ 149 (255)
T PRK07523 87 PIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQS 149 (255)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchh
Confidence 79999972 0 11 33433 3457889999999754
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.3e-11 Score=102.63 Aligned_cols=100 Identities=16% Similarity=0.146 Sum_probs=73.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEE-EeCCccccc----c--cCCceEEEEccCCCHHHHHHhhc-------
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAME----S--FGTYVESMAGDASNKKFLKTALR------- 162 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~Vral-vR~~~~a~~----~--~g~~vevV~GDl~D~~sL~~AL~------- 162 (198)
...++|+||||||+||++++++|+++|++|.++ .|+.++... . .+..++++.+|++|++++.++++
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~ 83 (254)
T PRK12746 4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQ 83 (254)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhc
Confidence 345789999999999999999999999999886 465543211 1 13458899999999999988876
Q ss_pred ------CccEEEEcC----h--------------------hH--HHHHHHh--CCCCeEEEEccccee
Q 029118 163 ------GVRSIICPS----E--------------------GF--ISNAGSL--KGVQHVILLSQGAVV 196 (198)
Q Consensus 163 ------GvDaVIh~a----~--------------------G~--lldAA~~--~GVkRiV~vSS~~Vy 196 (198)
++|+|||++ . ++ +++++.. ....+||++||..++
T Consensus 84 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~ 151 (254)
T PRK12746 84 IRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVR 151 (254)
T ss_pred cccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhc
Confidence 589999972 0 11 3344432 233699999997664
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.5e-11 Score=101.86 Aligned_cols=97 Identities=18% Similarity=0.233 Sum_probs=75.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-------c-CCceEEEEccCCCHHHHHHhhc-------C
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------F-GTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-------~-g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
++++|||||||+||++++++|+++|++|.++.|++++.... . +..++++.+|++|++++.++++ +
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG 81 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 46899999999999999999999999999999987543211 1 3468899999999998877664 6
Q ss_pred ccEEEEcC-------------h-----------hH------HHHHHHhCCCCeEEEEcccce
Q 029118 164 VRSIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 164 vDaVIh~a-------------~-----------G~------lldAA~~~GVkRiV~vSS~~V 195 (198)
+|.|||++ . +. +++.+++.+..+||++||...
T Consensus 82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~ 143 (248)
T PRK08251 82 LDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSA 143 (248)
T ss_pred CCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEecccc
Confidence 89999972 0 00 223345678899999999643
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.5e-11 Score=101.87 Aligned_cols=100 Identities=17% Similarity=0.138 Sum_probs=75.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cCCceEEEEccCCCHHHHHHhhc-------Cc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~AL~-------Gv 164 (198)
.++++|||||+|+||++++++|+++|++|.++.|+++..... .+.++.++..|++|++++.++++ .+
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 84 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI 84 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 457899999999999999999999999999999986543111 12357789999999999887765 67
Q ss_pred cEEEEcCh---------------------------hH--HHHH----HHhCCCCeEEEEcccceec
Q 029118 165 RSIICPSE---------------------------GF--ISNA----GSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 165 DaVIh~a~---------------------------G~--lldA----A~~~GVkRiV~vSS~~Vy~ 197 (198)
|.|||++. +. ++++ ..+.+.++||++||.++|.
T Consensus 85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~ 150 (250)
T PRK07774 85 DYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL 150 (250)
T ss_pred CEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC
Confidence 99999720 00 2333 3345678999999987653
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.32 E-value=1e-11 Score=105.61 Aligned_cols=91 Identities=13% Similarity=0.214 Sum_probs=79.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc---C-hh--
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP---S-EG-- 173 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~---a-~G-- 173 (198)
|+|.|.||||.+|++++++++.+||+|+++|||+++.... +++.+++.|+.|++++.+.+.|.|+||.. . .+
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~--~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~~~~~ 78 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR--QGVTILQKDIFDLTSLASDLAGHDAVISAFGAGASDND 78 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc--ccceeecccccChhhhHhhhcCCceEEEeccCCCCChh
Confidence 6899999999999999999999999999999999887554 56889999999999999999999999976 1 11
Q ss_pred --------HHHHHHHhCCCCeEEEEcc
Q 029118 174 --------FISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 174 --------~lldAA~~~GVkRiV~vSS 192 (198)
.++++.+.+|+.|++.+.-
T Consensus 79 ~~~~k~~~~li~~l~~agv~RllVVGG 105 (211)
T COG2910 79 ELHSKSIEALIEALKGAGVPRLLVVGG 105 (211)
T ss_pred HHHHHHHHHHHHHHhhcCCeeEEEEcC
Confidence 1777888889999998853
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.1e-11 Score=101.73 Aligned_cols=99 Identities=13% Similarity=0.110 Sum_probs=76.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEE-EeCCccccc------ccCCceEEEEccCCCHHHHHHhhc-------
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAME------SFGTYVESMAGDASNKKFLKTALR------- 162 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~Vral-vR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~------- 162 (198)
..+++||||||||+||++++++|+++|++|.++ .|++++... ..+..+.++.+|++|++++.++++
T Consensus 3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (247)
T PRK05565 3 LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFG 82 (247)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 346789999999999999999999999999999 887654321 123458899999999999988876
Q ss_pred CccEEEEcC-------------h-----------hH--H----HHHHHhCCCCeEEEEcccce
Q 029118 163 GVRSIICPS-------------E-----------GF--I----SNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 163 GvDaVIh~a-------------~-----------G~--l----ldAA~~~GVkRiV~vSS~~V 195 (198)
++|+|||.+ . +. + ++..++.+.++||++||.+.
T Consensus 83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~ 145 (247)
T PRK05565 83 KIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWG 145 (247)
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhh
Confidence 789999972 0 11 2 23344567889999999643
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=1e-11 Score=108.19 Aligned_cols=98 Identities=18% Similarity=0.183 Sum_probs=77.0
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccC--CceEEEEccCCCHHHHHHhh-------cCccEE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTAL-------RGVRSI 167 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g--~~vevV~GDl~D~~sL~~AL-------~GvDaV 167 (198)
..+++||||||||+||++++++|+++|++|+++.|++++...... ..++++.+|++|++++++++ .++|.|
T Consensus 24 l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~l 103 (315)
T PRK06196 24 LSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDIL 103 (315)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEE
Confidence 346799999999999999999999999999999998765432211 24789999999999998877 368999
Q ss_pred EEcC-----------h-----------hH------HHHHHHhCCCCeEEEEcccc
Q 029118 168 ICPS-----------E-----------GF------ISNAGSLKGVQHVILLSQGA 194 (198)
Q Consensus 168 Ih~a-----------~-----------G~------lldAA~~~GVkRiV~vSS~~ 194 (198)
||++ . +. ++.++++.+..|||++||.+
T Consensus 104 i~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~ 158 (315)
T PRK06196 104 INNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAG 158 (315)
T ss_pred EECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHH
Confidence 9972 0 11 34556667778999999964
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.3e-11 Score=102.36 Aligned_cols=96 Identities=15% Similarity=0.099 Sum_probs=74.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-------cCCceEEEEccCCCHHHHHHhhcC----ccEE
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALRG----VRSI 167 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-------~g~~vevV~GDl~D~~sL~~AL~G----vDaV 167 (198)
+++++||||||+||++++++|+++|++|.+++|++++.... .+.+++++++|++|++.++++++. +|.|
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~v 80 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIV 80 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEE
Confidence 46899999999999999999999999999999987653211 134689999999999999887764 5899
Q ss_pred EEcC-------------h-----------hH--HH----HHHHhCCCCeEEEEcccc
Q 029118 168 ICPS-------------E-----------GF--IS----NAGSLKGVQHVILLSQGA 194 (198)
Q Consensus 168 Ih~a-------------~-----------G~--ll----dAA~~~GVkRiV~vSS~~ 194 (198)
||.+ + +. ++ ..+.+.+..+||++||..
T Consensus 81 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~ 137 (243)
T PRK07102 81 LIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVA 137 (243)
T ss_pred EECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEeccc
Confidence 9861 0 11 22 334456789999999964
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.31 E-value=3.3e-11 Score=101.86 Aligned_cols=95 Identities=15% Similarity=0.163 Sum_probs=75.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc-------CccEEEE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~-------GvDaVIh 169 (198)
..++++|||||+|.||++++++|+++|++|.++.|+.... ..++++++|++|++++.++++ .+|.|||
T Consensus 4 l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~-----~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~ 78 (258)
T PRK06398 4 LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY-----NDVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVN 78 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc-----CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4568999999999999999999999999999999876542 257899999999999988875 6899999
Q ss_pred cC------------------------hhH--H----HHHHHhCCCCeEEEEccccee
Q 029118 170 PS------------------------EGF--I----SNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 170 ~a------------------------~G~--l----ldAA~~~GVkRiV~vSS~~Vy 196 (198)
++ .+. + +..+++.+..+||++||...+
T Consensus 79 ~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~ 135 (258)
T PRK06398 79 NAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSF 135 (258)
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhc
Confidence 62 011 2 333445677899999997654
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.1e-11 Score=106.05 Aligned_cols=101 Identities=17% Similarity=0.199 Sum_probs=79.0
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cCCceEEEEccCCCHHHHHHhhc-------
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------- 162 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~AL~------- 162 (198)
...+++++||||+|+||++++++|+++|++|.+++|+.+..... .+..+.++.+|++|++++.++++
T Consensus 37 ~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g 116 (293)
T PRK05866 37 DLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIG 116 (293)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 34557899999999999999999999999999999987543211 13457889999999999988887
Q ss_pred CccEEEEcC---------h-----------------hH------HHHHHHhCCCCeEEEEccccee
Q 029118 163 GVRSIICPS---------E-----------------GF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 163 GvDaVIh~a---------~-----------------G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
.+|.|||++ + +. ++..+++.+..+||++||.+++
T Consensus 117 ~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~ 182 (293)
T PRK05866 117 GVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVL 182 (293)
T ss_pred CCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhc
Confidence 789999972 0 00 2334457788999999997654
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.5e-11 Score=102.20 Aligned_cols=96 Identities=17% Similarity=0.129 Sum_probs=75.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc--------CccEEEEcC
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--------GVRSIICPS 171 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~--------GvDaVIh~a 171 (198)
++||||||||+||+++++.|+++|++|+++.|++++.......+++++++|++|.+.+.++++ .+|.+||++
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~a 82 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNNA 82 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEECC
Confidence 479999999999999999999999999999998865443333457899999999988877653 357788761
Q ss_pred ------------------------hhH------HHHHHHhCCCCeEEEEcccce
Q 029118 172 ------------------------EGF------ISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 172 ------------------------~G~------lldAA~~~GVkRiV~vSS~~V 195 (198)
.|+ +++++++.+.++||++||...
T Consensus 83 g~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~ 136 (256)
T PRK08017 83 GFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMG 136 (256)
T ss_pred CCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCccc
Confidence 011 357777888999999999643
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=2.3e-11 Score=101.70 Aligned_cols=100 Identities=16% Similarity=0.098 Sum_probs=76.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc--c---ccCCceEEEEccCCCHHHHHHhhc-------Cc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM--E---SFGTYVESMAGDASNKKFLKTALR-------GV 164 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~--~---~~g~~vevV~GDl~D~~sL~~AL~-------Gv 164 (198)
..++++|||||+|+||++++++|+++|++|.++.|++.... . ..+..+.++.+|++|++++.++++ ++
T Consensus 6 ~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (260)
T PRK12823 6 FAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRI 85 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence 34678999999999999999999999999999999753211 1 123457889999999988887765 67
Q ss_pred cEEEEcCh-------------------------h------HHHHHHHhCCCCeEEEEccccee
Q 029118 165 RSIICPSE-------------------------G------FISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 165 DaVIh~a~-------------------------G------~lldAA~~~GVkRiV~vSS~~Vy 196 (198)
|.+||++. + .+++.+++.+..+||++||...+
T Consensus 86 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~ 148 (260)
T PRK12823 86 DVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATR 148 (260)
T ss_pred eEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCcccc
Confidence 99999720 0 03455566788899999998654
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=2.4e-11 Score=102.76 Aligned_cols=97 Identities=15% Similarity=0.151 Sum_probs=77.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhc-------CccE
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~-------GvDa 166 (198)
+++|||||||+||++++++|+++|++|.+++|+.++... ..+..+.++.+|++|++++.++++ ++|.
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~ 80 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV 80 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 479999999999999999999999999999998755321 124568899999999999888775 6899
Q ss_pred EEEcC-------------h-----------hH------HHHHHHhCCCCeEEEEccccee
Q 029118 167 IICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 167 VIh~a-------------~-----------G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
|||++ . +. +++.+++.+..+||++||...+
T Consensus 81 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~ 140 (270)
T PRK05650 81 IVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGL 140 (270)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhc
Confidence 99972 0 00 3445667788999999997543
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.29 E-value=2.9e-11 Score=116.11 Aligned_cols=82 Identities=11% Similarity=0.134 Sum_probs=65.8
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc--CccEEEEcC--
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPS-- 171 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~--GvDaVIh~a-- 171 (198)
..+.|+|||||||||||+++++.|.++|++|.. ..+|++|++.+.+.++ ++|+|||++
T Consensus 377 ~~~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~------------------~~~~l~d~~~v~~~i~~~~pd~Vih~Aa~ 438 (668)
T PLN02260 377 GKPSLKFLIYGRTGWIGGLLGKLCEKQGIAYEY------------------GKGRLEDRSSLLADIRNVKPTHVFNAAGV 438 (668)
T ss_pred CCCCceEEEECCCchHHHHHHHHHHhCCCeEEe------------------eccccccHHHHHHHHHhhCCCEEEECCcc
Confidence 445678999999999999999999999998731 1246889999988886 789999982
Q ss_pred -----h----------------hH--HHHHHHhCCCCeEEEEccccee
Q 029118 172 -----E----------------GF--ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 172 -----~----------------G~--lldAA~~~GVkRiV~vSS~~Vy 196 (198)
. ++ ++++|++.|++ +|++||..||
T Consensus 439 ~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~~-~v~~Ss~~v~ 485 (668)
T PLN02260 439 TGRPNVDWCESHKVETIRANVVGTLTLADVCRENGLL-MMNFATGCIF 485 (668)
T ss_pred cCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCCe-EEEEccccee
Confidence 0 11 78999999996 5677887776
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=3.6e-11 Score=101.50 Aligned_cols=99 Identities=13% Similarity=0.114 Sum_probs=76.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
..++++|||||+|+||++++++|+++|++|+++.|++++.... .+..+.++.+|++|++++.++++ .
T Consensus 8 ~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 87 (263)
T PRK07814 8 LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGR 87 (263)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4567999999999999999999999999999999987543211 23468899999999999988775 6
Q ss_pred ccEEEEcC-------------h-----------hH--HHHHHH----h-CCCCeEEEEcccce
Q 029118 164 VRSIICPS-------------E-----------GF--ISNAGS----L-KGVQHVILLSQGAV 195 (198)
Q Consensus 164 vDaVIh~a-------------~-----------G~--lldAA~----~-~GVkRiV~vSS~~V 195 (198)
+|+|||++ . +. +.+++. + .+..+||++||...
T Consensus 88 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~ 150 (263)
T PRK07814 88 LDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMG 150 (263)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccc
Confidence 79999972 0 01 344443 2 56789999999643
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=3.8e-11 Score=100.36 Aligned_cols=71 Identities=15% Similarity=0.193 Sum_probs=61.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcC-------ccEEEEc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG-------VRSIICP 170 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~G-------vDaVIh~ 170 (198)
.++++|||||+|.||++++++|+++|++|.++.|++++ ...+..++++++|++|++++.++++. +|.|||+
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ 82 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE--TVDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLVNN 82 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh--hhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 46799999999999999999999999999999998754 22245688999999999999888864 4999996
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=2.1e-11 Score=101.77 Aligned_cols=96 Identities=18% Similarity=0.149 Sum_probs=75.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc----ccCCceEEEEccCCCHHHHHHhhc-------CccEE
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME----SFGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~----~~g~~vevV~GDl~D~~sL~~AL~-------GvDaV 167 (198)
.+++|||||||+||++++++|+++|++|.++.|++++... ..+..++++.+|+.|++++.++++ ++|.|
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL 81 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 3589999999999999999999999999999998765321 123458899999999999988886 47999
Q ss_pred EEcC-------------h-----------hH--HH----HHHHhCCCCeEEEEcccc
Q 029118 168 ICPS-------------E-----------GF--IS----NAGSLKGVQHVILLSQGA 194 (198)
Q Consensus 168 Ih~a-------------~-----------G~--ll----dAA~~~GVkRiV~vSS~~ 194 (198)
||++ + +. ++ ..+++++..+||++||..
T Consensus 82 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~ 138 (257)
T PRK07074 82 VANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVN 138 (257)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchh
Confidence 9982 0 00 22 334567788999999963
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=99.28 E-value=4.1e-11 Score=98.44 Aligned_cols=99 Identities=13% Similarity=0.133 Sum_probs=75.6
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc---ccCCceEEEEccCCCHHHHHHhh-------cCccE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTAL-------RGVRS 166 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~---~~g~~vevV~GDl~D~~sL~~AL-------~GvDa 166 (198)
.+++++|||||||+||++++++|+++|+.|.+..|++++... ..+.+++++.+|++|.+++.+++ .++|+
T Consensus 4 ~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (245)
T PRK12936 4 LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDI 83 (245)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 346799999999999999999999999999888887654432 23456889999999999988875 36899
Q ss_pred EEEcC----h--------------------hH--HHHH----HHhCCCCeEEEEcccce
Q 029118 167 IICPS----E--------------------GF--ISNA----GSLKGVQHVILLSQGAV 195 (198)
Q Consensus 167 VIh~a----~--------------------G~--lldA----A~~~GVkRiV~vSS~~V 195 (198)
|||++ . +. ++++ +++++..+||++||.+.
T Consensus 84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~ 142 (245)
T PRK12936 84 LVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVG 142 (245)
T ss_pred EEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHh
Confidence 99982 0 11 2333 33457789999999643
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=2e-11 Score=101.54 Aligned_cols=75 Identities=17% Similarity=0.255 Sum_probs=62.0
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc---c-CCceEEEEccCCCHHHHHHhhc-------Cc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F-GTYVESMAGDASNKKFLKTALR-------GV 164 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~---~-g~~vevV~GDl~D~~sL~~AL~-------Gv 164 (198)
..+.+++|||||+|+||++++++|+++|++|+++.|+++..... . ...++++.+|++|++++.++++ ++
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 87 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGL 87 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 34668999999999999999999999999999999987543221 1 1146889999999999988774 78
Q ss_pred cEEEEc
Q 029118 165 RSIICP 170 (198)
Q Consensus 165 DaVIh~ 170 (198)
|+|||+
T Consensus 88 d~vi~~ 93 (264)
T PRK12829 88 DVLVNN 93 (264)
T ss_pred CEEEEC
Confidence 999997
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=2.1e-11 Score=102.45 Aligned_cols=97 Identities=15% Similarity=0.135 Sum_probs=76.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc---cC--CceEEEEccCCCHHHHHHhhcC-------ccE
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG--TYVESMAGDASNKKFLKTALRG-------VRS 166 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~---~g--~~vevV~GDl~D~~sL~~AL~G-------vDa 166 (198)
++++|||||||+||++++++|+++|++|.++.|++++.... .. .++.++.+|++|++++.++++. +|.
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~ 81 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV 81 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 46899999999999999999999999999999987654221 11 1588999999999999888754 699
Q ss_pred EEEcC---------h----------------hH------HHHHHHhCCCCeEEEEcccce
Q 029118 167 IICPS---------E----------------GF------ISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 167 VIh~a---------~----------------G~------lldAA~~~GVkRiV~vSS~~V 195 (198)
+||++ . +. ++.++++.+..+||++||...
T Consensus 82 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~ 141 (257)
T PRK07024 82 VIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAG 141 (257)
T ss_pred EEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhh
Confidence 99871 0 11 345667778899999999643
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.28 E-value=2.1e-11 Score=109.99 Aligned_cols=98 Identities=16% Similarity=0.156 Sum_probs=77.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcE--EEEEe-----CCccccccc-CCceEEEEccCCCHHHHHHhhc--CccEEEE
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRI--KALVK-----DKRNAMESF-GTYVESMAGDASNKKFLKTALR--GVRSIIC 169 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~V--ralvR-----~~~~a~~~~-g~~vevV~GDl~D~~sL~~AL~--GvDaVIh 169 (198)
+++||||+.||||+++++.++.+..+. .++.+ +.+...... .++..+++||++|.+.+.+.++ .+|+|+|
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh 80 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH 80 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence 579999999999999999999987654 44443 111211222 3689999999999999999998 5899999
Q ss_pred cC--------------------hhH--HHHHHHhCCCC-eEEEEcccceec
Q 029118 170 PS--------------------EGF--ISNAGSLKGVQ-HVILLSQGAVVC 197 (198)
Q Consensus 170 ~a--------------------~G~--lldAA~~~GVk-RiV~vSS~~Vy~ 197 (198)
.+ .|+ +++|+++...+ ||+++|+-.||+
T Consensus 81 fAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG 131 (340)
T COG1088 81 FAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYG 131 (340)
T ss_pred echhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccc
Confidence 72 233 89999998875 999999999986
|
|
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.7e-11 Score=117.52 Aligned_cols=98 Identities=22% Similarity=0.350 Sum_probs=82.5
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcccc-------cccC-CceEEEEccCCCHHHHHHhhcC--c
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAM-------ESFG-TYVESMAGDASNKKFLKTALRG--V 164 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~-------~~~g-~~vevV~GDl~D~~sL~~AL~G--v 164 (198)
-..+++||||||+|-||+.+++++++.+. +++.+.|+..+.. ..++ ..+.++.||+.|.+.+..++++ +
T Consensus 247 ~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kv 326 (588)
T COG1086 247 MLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKV 326 (588)
T ss_pred HcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCC
Confidence 56688999999999999999999999885 6777788875431 1122 4578899999999999999999 9
Q ss_pred cEEEEcC--------------------hhH--HHHHHHhCCCCeEEEEccc
Q 029118 165 RSIICPS--------------------EGF--ISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 165 DaVIh~a--------------------~G~--lldAA~~~GVkRiV~vSS~ 193 (198)
|.|||++ .|+ +++||.++||++||++|+-
T Consensus 327 d~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTD 377 (588)
T COG1086 327 DIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTD 377 (588)
T ss_pred ceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecC
Confidence 9999982 233 8999999999999999995
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.28 E-value=2.2e-11 Score=112.14 Aligned_cols=98 Identities=21% Similarity=0.269 Sum_probs=79.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcc--cc--------------cccCCceEEEEccCC------CHHH
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN--AM--------------ESFGTYVESMAGDAS------NKKF 156 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~--a~--------------~~~g~~vevV~GDl~------D~~s 156 (198)
++||+||||||+|++++++|+.+-. +|.|+||-.+. +. +....+++++.||+. +...
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~ 80 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT 80 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence 4799999999999999999999865 99999996541 11 123467999999998 4667
Q ss_pred HHHhhcCccEEEEc-C----------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 157 LKTALRGVRSIICP-S----------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 157 L~~AL~GvDaVIh~-a----------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
+.+..+.+|.|||+ + .|+ +++.|.....|.+.|+||++|+.
T Consensus 81 ~~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~ 140 (382)
T COG3320 81 WQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGE 140 (382)
T ss_pred HHHHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeecc
Confidence 77777889999998 2 244 78888888899999999999863
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=5.2e-11 Score=98.11 Aligned_cols=73 Identities=16% Similarity=0.173 Sum_probs=61.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhh-------cCc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTAL-------RGV 164 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL-------~Gv 164 (198)
..++++||||+|.||++++++|+++|++|.++.|++++... ..+..++++.+|++|++++.+++ .++
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 85 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL 85 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 45789999999999999999999999999999988764321 12346899999999999998887 368
Q ss_pred cEEEEc
Q 029118 165 RSIICP 170 (198)
Q Consensus 165 DaVIh~ 170 (198)
|+|||+
T Consensus 86 d~vi~~ 91 (250)
T PRK12939 86 DGLVNN 91 (250)
T ss_pred CEEEEC
Confidence 999997
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.26 E-value=3.7e-11 Score=98.51 Aligned_cols=95 Identities=20% Similarity=0.245 Sum_probs=73.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEe-CCccccc------ccCCceEEEEccCCCHHHHHHhhc-------Ccc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVK-DKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GVR 165 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR-~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~-------GvD 165 (198)
+++|||||||+||++++++|+++|++|.++.| ++..... ..+.++.++.+|++|++++.++++ .+|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID 80 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence 47999999999999999999999999999998 4332211 123468899999999999887764 479
Q ss_pred EEEEcC------------------------hhH------HHHHHHhCCCCeEEEEcccc
Q 029118 166 SIICPS------------------------EGF------ISNAGSLKGVQHVILLSQGA 194 (198)
Q Consensus 166 aVIh~a------------------------~G~------lldAA~~~GVkRiV~vSS~~ 194 (198)
.|||++ .+. ++.++++.++.+||++||..
T Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~ 139 (242)
T TIGR01829 81 VLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVN 139 (242)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchh
Confidence 999972 000 34556677889999999964
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=5.5e-11 Score=99.61 Aligned_cols=100 Identities=15% Similarity=0.149 Sum_probs=77.0
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc--------cCCceEEEEccCCCHHHHHHhhc------
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--------FGTYVESMAGDASNKKFLKTALR------ 162 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~--------~g~~vevV~GDl~D~~sL~~AL~------ 162 (198)
...+++|||||+|+||++++++|+++|++|.++.|+++..... .+..+.++++|++|++.+.++++
T Consensus 5 l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (260)
T PRK07063 5 LAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAF 84 (260)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 4567899999999999999999999999999999987543211 23457899999999999988875
Q ss_pred -CccEEEEcC-------------h-----------hH--H----HHHHHhCCCCeEEEEccccee
Q 029118 163 -GVRSIICPS-------------E-----------GF--I----SNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 163 -GvDaVIh~a-------------~-----------G~--l----ldAA~~~GVkRiV~vSS~~Vy 196 (198)
.+|++||++ . +. + +..+++.+..+||++||...+
T Consensus 85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 149 (260)
T PRK07063 85 GPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAF 149 (260)
T ss_pred CCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhc
Confidence 689999972 0 00 2 233445667899999997543
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=5.7e-11 Score=97.59 Aligned_cols=97 Identities=19% Similarity=0.147 Sum_probs=75.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc-ccc------ccCCceEEEEccCCCHHHHHHhhc-------Ccc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AME------SFGTYVESMAGDASNKKFLKTALR-------GVR 165 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~-a~~------~~g~~vevV~GDl~D~~sL~~AL~-------GvD 165 (198)
+++|||||+|+||++++++|+++|++|+++.|++.. ... ..+..+.++.+|++|++++.++++ .+|
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id 82 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVD 82 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 589999999999999999999999999999998531 111 112458899999999999988875 479
Q ss_pred EEEEcC-------------h-----------hH------HHHHHHhCCCCeEEEEccccee
Q 029118 166 SIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 166 aVIh~a-------------~-----------G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
.|||++ + +. +++++++.+..+||++||...+
T Consensus 83 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~ 143 (245)
T PRK12824 83 ILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGL 143 (245)
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhc
Confidence 999972 0 11 3455677788999999997654
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=4.7e-11 Score=100.89 Aligned_cols=99 Identities=16% Similarity=0.199 Sum_probs=75.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------c--CCceEEEEccCCCHHHHHHhhc-------
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------F--GTYVESMAGDASNKKFLKTALR------- 162 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~--g~~vevV~GDl~D~~sL~~AL~------- 162 (198)
.++++|||||+|+||++++++|+++|++|.++.|++++.... . +.++.++.+|++|++.+.++++
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 85 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHG 85 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 457999999999999999999999999999999986543211 1 2467889999999999988876
Q ss_pred CccEEEEcCh-------------------------hH--HHHHH----HhCCCCeEEEEccccee
Q 029118 163 GVRSIICPSE-------------------------GF--ISNAG----SLKGVQHVILLSQGAVV 196 (198)
Q Consensus 163 GvDaVIh~a~-------------------------G~--lldAA----~~~GVkRiV~vSS~~Vy 196 (198)
.+|.|||++. +. +++++ .+.+-.+||++||..++
T Consensus 86 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~ 150 (276)
T PRK05875 86 RLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAAS 150 (276)
T ss_pred CCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhc
Confidence 6899999720 00 33333 33456799999998664
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=2.9e-11 Score=99.61 Aligned_cols=73 Identities=21% Similarity=0.262 Sum_probs=61.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccccc-CCceEEEEccCCCHHHHHHhhc---CccEEEEc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTALR---GVRSIICP 170 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~-g~~vevV~GDl~D~~sL~~AL~---GvDaVIh~ 170 (198)
.+++++||||+|+||+++++.|+++|++|+++.|++++..+.. ..+++++.+|++|++.+.++++ .+|+|||+
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ 84 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNC 84 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEEC
Confidence 4578999999999999999999999999999999876543221 1236789999999999988886 48999997
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=3.4e-11 Score=100.14 Aligned_cols=73 Identities=10% Similarity=0.150 Sum_probs=61.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cCCceEEEEccCCCHHHHHHhhc-------Cc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~AL~-------Gv 164 (198)
.++++|||||||+||++++++|+++|++|.++.|++...... .+..++++..|++|++++.++++ .+
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRV 83 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCc
Confidence 457899999999999999999999999999999987543221 13457899999999999887774 57
Q ss_pred cEEEEc
Q 029118 165 RSIICP 170 (198)
Q Consensus 165 DaVIh~ 170 (198)
|+|||+
T Consensus 84 d~vi~~ 89 (258)
T PRK07890 84 DALVNN 89 (258)
T ss_pred cEEEEC
Confidence 999997
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=9.1e-11 Score=98.10 Aligned_cols=98 Identities=18% Similarity=0.188 Sum_probs=76.8
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhh-------cCccEEE
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL-------RGVRSII 168 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL-------~GvDaVI 168 (198)
+..++++|||||+|+||++++++|.++|++|.++.|+.... .+..+.++++|++|++.+.+++ .++|.||
T Consensus 6 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi 82 (260)
T PRK06523 6 ELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD---LPEGVEFVAADLTTAEGCAAVARAVLERLGGVDILV 82 (260)
T ss_pred CCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh---cCCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 34568999999999999999999999999999999986542 2345889999999999877654 4679999
Q ss_pred EcCh--------------------------hH------HHHHHHhCCCCeEEEEccccee
Q 029118 169 CPSE--------------------------GF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 169 h~a~--------------------------G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
|++. +. +++.+++.+..+||++||...+
T Consensus 83 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~ 142 (260)
T PRK06523 83 HVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRR 142 (260)
T ss_pred ECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEeccccc
Confidence 8620 11 2344556677899999997654
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.25 E-value=8.3e-11 Score=97.48 Aligned_cols=96 Identities=13% Similarity=0.113 Sum_probs=75.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcC-------ccEEEE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG-------VRSIIC 169 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~G-------vDaVIh 169 (198)
..++++|||||+|+||++++++|+++|++|.++.|++. ...+..++++++|++|++++.++++. +|.|||
T Consensus 6 ~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 82 (252)
T PRK08220 6 FSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFL---TQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLVN 82 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecchh---hhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 44678999999999999999999999999999999871 22345688999999999999998864 799999
Q ss_pred cC----h--------------------hH--HHHH----HHhCCCCeEEEEcccce
Q 029118 170 PS----E--------------------GF--ISNA----GSLKGVQHVILLSQGAV 195 (198)
Q Consensus 170 ~a----~--------------------G~--lldA----A~~~GVkRiV~vSS~~V 195 (198)
++ . +. ++++ .++.+..+||++||.+.
T Consensus 83 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~ 138 (252)
T PRK08220 83 AAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAA 138 (252)
T ss_pred CCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchh
Confidence 72 0 00 3334 34566789999999654
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.25 E-value=3.7e-11 Score=122.39 Aligned_cols=99 Identities=19% Similarity=0.259 Sum_probs=79.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC----CcEEEEEeCCcccc--cc--------------cCCceEEEEccCCC-----
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKR----TRIKALVKDKRNAM--ES--------------FGTYVESMAGDASN----- 153 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G----~~VralvR~~~~a~--~~--------------~g~~vevV~GDl~D----- 153 (198)
.++|||||||||+|++++++|+.++ ++|++++|+..... .. ...+++++.||+++
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence 4689999999999999999999887 89999999754321 00 11368999999974
Q ss_pred -HHHHHHhhcCccEEEEcC-----------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 154 -KKFLKTALRGVRSIICPS-----------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 154 -~~sL~~AL~GvDaVIh~a-----------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.+.+.++..++|+|||++ .|+ ++++|++.++++|||+||.+||.
T Consensus 1051 ~~~~~~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~ 1114 (1389)
T TIGR03443 1051 SDEKWSDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALD 1114 (1389)
T ss_pred CHHHHHHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecC
Confidence 567778889999999972 122 78899999999999999998873
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=6.8e-11 Score=100.63 Aligned_cols=100 Identities=16% Similarity=0.156 Sum_probs=78.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-------cCCceEEEEccCCCHHHHHHhhc------C
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR------G 163 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-------~g~~vevV~GDl~D~~sL~~AL~------G 163 (198)
..++++|||||+|.||++++++|+++|++|.++.|+.++.... .+.+++++.+|++|+++++++++ +
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~ 85 (263)
T PRK08339 6 LSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGE 85 (263)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCC
Confidence 4567899999999999999999999999999999987543211 13468899999999999988875 5
Q ss_pred ccEEEEcC-------------h-----------hH------HHHHHHhCCCCeEEEEccccee
Q 029118 164 VRSIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 164 vDaVIh~a-------------~-----------G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
+|.+||++ + +. ++..+++++..+||++||...+
T Consensus 86 iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~ 148 (263)
T PRK08339 86 PDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIK 148 (263)
T ss_pred CcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCcccc
Confidence 79999872 0 00 3455667778899999998654
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=9.7e-11 Score=98.24 Aligned_cols=102 Identities=13% Similarity=0.147 Sum_probs=78.7
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc--ccc---ccCCceEEEEccCCCHHHHHHhhc-------
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--AME---SFGTYVESMAGDASNKKFLKTALR------- 162 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~--a~~---~~g~~vevV~GDl~D~~sL~~AL~------- 162 (198)
....++++|||||+|+||++++++|+++|++|.++.|+... ... ..+..++++++|++|.+.+.++++
T Consensus 11 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g 90 (258)
T PRK06935 11 FSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFG 90 (258)
T ss_pred ccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 34567899999999999999999999999999999987321 111 124568899999999999988876
Q ss_pred CccEEEEcC-------------h-----------hH------HHHHHHhCCCCeEEEEccccee
Q 029118 163 GVRSIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 163 GvDaVIh~a-------------~-----------G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
.+|.+||++ . +. ++..+++.+..+||++||...+
T Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 154 (258)
T PRK06935 91 KIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSF 154 (258)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhc
Confidence 679999972 0 10 2344556778899999997654
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.25 E-value=5.1e-11 Score=103.96 Aligned_cols=73 Identities=12% Similarity=0.203 Sum_probs=61.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cCCceEEEEccCCCHHHHHHhhc-------Cc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~AL~-------Gv 164 (198)
.+++++||||+|+||++++++|+++|++|+++.|+.++.... .+..++++.+|++|+++++++++ .+
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 84 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL 84 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence 467899999999999999999999999999999987653211 12458899999999999998875 38
Q ss_pred cEEEEc
Q 029118 165 RSIICP 170 (198)
Q Consensus 165 DaVIh~ 170 (198)
|.|||.
T Consensus 85 D~li~n 90 (322)
T PRK07453 85 DALVCN 90 (322)
T ss_pred cEEEEC
Confidence 999987
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=6.7e-11 Score=98.67 Aligned_cols=100 Identities=14% Similarity=0.121 Sum_probs=78.1
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhcC------
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALRG------ 163 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~G------ 163 (198)
...+++++||||+|+||++++++|+++|++|.++.|+++...+ ..+..+.++.+|++|++++.++++.
T Consensus 8 ~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 87 (256)
T PRK06124 8 SLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHG 87 (256)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 3567899999999999999999999999999999998754321 1244688999999999999888763
Q ss_pred -ccEEEEcC-------------h-----------hH------HHHHHHhCCCCeEEEEcccce
Q 029118 164 -VRSIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 164 -vDaVIh~a-------------~-----------G~------lldAA~~~GVkRiV~vSS~~V 195 (198)
+|.|||++ . +. +++.+++.+..+||++||...
T Consensus 88 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~ 150 (256)
T PRK06124 88 RLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAG 150 (256)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechh
Confidence 48899872 0 01 234555678899999999754
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=6.8e-11 Score=100.22 Aligned_cols=72 Identities=15% Similarity=0.141 Sum_probs=61.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc-------CccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~-------GvDaVIh~ 170 (198)
++++|||||||+||++++++|.++|++|.+++|+.++.......+++++.+|++|++.+.++++ ++|.|||+
T Consensus 1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ 79 (274)
T PRK05693 1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINN 79 (274)
T ss_pred CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence 3689999999999999999999999999999998765443333457889999999999887763 67999997
|
|
| >KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.24 E-value=3.8e-11 Score=111.67 Aligned_cols=102 Identities=23% Similarity=0.328 Sum_probs=75.1
Q ss_pred cccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccC-----CceEEEEccCCCHHHHHHhhc-----C
Q 029118 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-----TYVESMAGDASNKKFLKTALR-----G 163 (198)
Q Consensus 94 ~~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g-----~~vevV~GDl~D~~sL~~AL~-----G 163 (198)
-.....+.|||+||||.+|+.+++.|+++|+.||+++|+..++...++ ...+.+..+...+.+...-+. +
T Consensus 74 ~~~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~ 153 (411)
T KOG1203|consen 74 NNSKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPKG 153 (411)
T ss_pred CCCCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhcccc
Confidence 344556689999999999999999999999999999999987765544 335556666555444443333 2
Q ss_pred ccEEEEcC-----------------hhH--HHHHHHhCCCCeEEEEcccce
Q 029118 164 VRSIICPS-----------------EGF--ISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 164 vDaVIh~a-----------------~G~--lldAA~~~GVkRiV~vSS~~V 195 (198)
+..++.+. .|+ +++||+.+||+|||++|+++.
T Consensus 154 ~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~ 204 (411)
T KOG1203|consen 154 VVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGG 204 (411)
T ss_pred ceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecC
Confidence 33444441 122 899999999999999999875
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=1e-10 Score=97.29 Aligned_cols=99 Identities=20% Similarity=0.279 Sum_probs=75.6
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc---cccCCceEEEEccCCCHHHHHHhhc-------CccE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~---~~~g~~vevV~GDl~D~~sL~~AL~-------GvDa 166 (198)
...+++|||||+|+||++++++|+++|++|.++.|++.... ...+..+.++..|++|++++.++++ ++|+
T Consensus 13 ~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 92 (255)
T PRK06841 13 LSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI 92 (255)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 45679999999999999999999999999999999875321 1123456789999999999988775 5799
Q ss_pred EEEcC-------------h-----------hH--HHHH----HHhCCCCeEEEEcccce
Q 029118 167 IICPS-------------E-----------GF--ISNA----GSLKGVQHVILLSQGAV 195 (198)
Q Consensus 167 VIh~a-------------~-----------G~--lldA----A~~~GVkRiV~vSS~~V 195 (198)
|||++ . +. ++++ +++.+..|||++||.+.
T Consensus 93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~ 151 (255)
T PRK06841 93 LVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAG 151 (255)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhh
Confidence 99972 0 11 2333 34557889999999653
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=7.5e-11 Score=98.77 Aligned_cols=71 Identities=13% Similarity=0.252 Sum_probs=60.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhc-------CccE
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~-------GvDa 166 (198)
+++|||||+|+||++++++|+++|++|++++|++.+... ..+..+.++.+|++|++.+.++++ ++|+
T Consensus 2 ~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 81 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGIDI 81 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 579999999999999999999999999999998654321 124568899999999999988876 6899
Q ss_pred EEEc
Q 029118 167 IICP 170 (198)
Q Consensus 167 VIh~ 170 (198)
|||+
T Consensus 82 vi~~ 85 (263)
T PRK06181 82 LVNN 85 (263)
T ss_pred EEEC
Confidence 9998
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.23 E-value=8.2e-11 Score=98.52 Aligned_cols=75 Identities=16% Similarity=0.229 Sum_probs=61.1
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc---ccCCceEEEEccCCCHHHHHHhhc-------Ccc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVR 165 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~---~~g~~vevV~GDl~D~~sL~~AL~-------GvD 165 (198)
...++++|||||+|+||++++++|+++|++|.++.|++.+... ..+..+.++.+|++|++++.++++ .+|
T Consensus 7 ~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id 86 (255)
T PRK05717 7 GHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLD 86 (255)
T ss_pred ccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 3446789999999999999999999999999999887654322 234568899999999998877653 479
Q ss_pred EEEEc
Q 029118 166 SIICP 170 (198)
Q Consensus 166 aVIh~ 170 (198)
.|||+
T Consensus 87 ~li~~ 91 (255)
T PRK05717 87 ALVCN 91 (255)
T ss_pred EEEEC
Confidence 99997
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=6.9e-11 Score=104.98 Aligned_cols=101 Identities=11% Similarity=0.184 Sum_probs=79.8
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
..+++|+||||||+||++++++|+++|++|.++.|++++..+ ..+..+.++.+|++|+++++++++ .
T Consensus 6 l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~ 85 (334)
T PRK07109 6 IGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGP 85 (334)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCC
Confidence 345789999999999999999999999999999998754321 124568899999999999998864 6
Q ss_pred ccEEEEcC-------------h-----------hH------HHHHHHhCCCCeEEEEcccceec
Q 029118 164 VRSIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 164 vDaVIh~a-------------~-----------G~------lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
+|.+||++ + +. ++..+++.+..+||++||...|.
T Consensus 86 iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~ 149 (334)
T PRK07109 86 IDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYR 149 (334)
T ss_pred CCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhcc
Confidence 89999872 0 01 34556677778999999987653
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=8.4e-11 Score=98.19 Aligned_cols=99 Identities=16% Similarity=0.168 Sum_probs=77.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cCCceEEEEccCCCHHHHHHhhc-------Cc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~AL~-------Gv 164 (198)
.++++|||||+|.||++++++|+++|++|.++.|++++.... .+..+.++.+|++|++++.++++ .+
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL 84 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 457899999999999999999999999999999987653211 23457889999999999888875 67
Q ss_pred cEEEEcC--------------hh-----------H------HHHHHHhCCCCeEEEEccccee
Q 029118 165 RSIICPS--------------EG-----------F------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 165 DaVIh~a--------------~G-----------~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
|++||++ +. . ++..+++.+-.+||++||...+
T Consensus 85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~ 147 (254)
T PRK07478 85 DIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGH 147 (254)
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhh
Confidence 9999872 00 0 2445566777899999996543
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.23 E-value=1e-10 Score=96.98 Aligned_cols=74 Identities=18% Similarity=0.251 Sum_probs=60.6
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc-c---cccCCceEEEEccCCCHHHHHHhhc-------Ccc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-M---ESFGTYVESMAGDASNKKFLKTALR-------GVR 165 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a-~---~~~g~~vevV~GDl~D~~sL~~AL~-------GvD 165 (198)
..++++|||||+|+||++++++|+++|++|.++.|+.... . ...+..+.++.+|++|++++.++++ ++|
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 82 (248)
T TIGR01832 3 LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHID 82 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 3567999999999999999999999999999999875221 1 1224568899999999999987663 589
Q ss_pred EEEEc
Q 029118 166 SIICP 170 (198)
Q Consensus 166 aVIh~ 170 (198)
+|||+
T Consensus 83 ~li~~ 87 (248)
T TIGR01832 83 ILVNN 87 (248)
T ss_pred EEEEC
Confidence 99997
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.1e-10 Score=97.57 Aligned_cols=74 Identities=16% Similarity=0.198 Sum_probs=62.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc-----cccCCceEEEEccCCCHHHHHHhhc-------Cc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-----ESFGTYVESMAGDASNKKFLKTALR-------GV 164 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~-----~~~g~~vevV~GDl~D~~sL~~AL~-------Gv 164 (198)
..++++|||||||+||++++++|+++|++|++++|++.+.. ...+.++.++.+|++|++++.++++ ++
T Consensus 5 l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (258)
T PRK08628 5 LKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRI 84 (258)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 45679999999999999999999999999999999876431 1124568999999999999988885 57
Q ss_pred cEEEEc
Q 029118 165 RSIICP 170 (198)
Q Consensus 165 DaVIh~ 170 (198)
|.|||+
T Consensus 85 d~vi~~ 90 (258)
T PRK08628 85 DGLVNN 90 (258)
T ss_pred CEEEEC
Confidence 999998
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=7.4e-11 Score=98.25 Aligned_cols=100 Identities=16% Similarity=0.126 Sum_probs=76.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhcC-------
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALRG------- 163 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~G------- 163 (198)
..++++|||||+|+||++++++|+++|++|.++.|++++... ..+..++++.+|++|++++.++++.
T Consensus 5 l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 84 (253)
T PRK06172 5 FSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGR 84 (253)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 346799999999999999999999999999999998754321 1244688999999999999888764
Q ss_pred ccEEEEcC----h----------h-----------H------HHHHHHhCCCCeEEEEccccee
Q 029118 164 VRSIICPS----E----------G-----------F------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 164 vDaVIh~a----~----------G-----------~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
+|+|||++ . . . ++..+.+.+..+||++||...+
T Consensus 85 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~ 148 (253)
T PRK06172 85 LDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGL 148 (253)
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhc
Confidence 59999972 0 0 0 1233445667899999997654
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.2e-10 Score=96.64 Aligned_cols=72 Identities=17% Similarity=0.212 Sum_probs=58.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc-c---c---ccCCceEEEEccCCCHHHHHHhhc-------Cc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-M---E---SFGTYVESMAGDASNKKFLKTALR-------GV 164 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a-~---~---~~g~~vevV~GDl~D~~sL~~AL~-------Gv 164 (198)
.+++|||||+|+||++++++|+++|++|.++.|+.... . . ..+.++.++.+|++|++++.++++ .+
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI 81 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 36799999999999999999999999999999865321 1 1 123468899999999998887764 57
Q ss_pred cEEEEc
Q 029118 165 RSIICP 170 (198)
Q Consensus 165 DaVIh~ 170 (198)
|+|||+
T Consensus 82 d~vi~~ 87 (256)
T PRK12745 82 DCLVNN 87 (256)
T ss_pred CEEEEC
Confidence 999997
|
|
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.22 E-value=2.8e-11 Score=108.83 Aligned_cols=101 Identities=20% Similarity=0.170 Sum_probs=77.3
Q ss_pred cCCccccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc-----cccCCceEEEEccCCCHHHHHHhhcCc
Q 029118 90 KEDEFPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-----ESFGTYVESMAGDASNKKFLKTALRGV 164 (198)
Q Consensus 90 ~~~~~~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~-----~~~g~~vevV~GDl~D~~sL~~AL~Gv 164 (198)
+|+-|...+ ++|+||||.||||+|+++.|..+||+|.|+.--....+ ..-.+.++.+.-|+..| .+.++
T Consensus 19 ~~~~~p~~~-lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~p-----l~~ev 92 (350)
T KOG1429|consen 19 REQVKPSQN-LRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEP-----LLKEV 92 (350)
T ss_pred hhcccCCCC-cEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccCcceeEEEeechhH-----HHHHh
Confidence 455555544 78999999999999999999999999999974222111 11236789999998776 77889
Q ss_pred cEEEEcC--------------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 165 RSIICPS--------------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 165 DaVIh~a--------------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
|.|||.+ .|+ ++-.|++.+ +||++.|+..||+
T Consensus 93 D~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv~-aR~l~aSTseVYg 146 (350)
T KOG1429|consen 93 DQIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARFLLASTSEVYG 146 (350)
T ss_pred hhhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHhC-ceEEEeecccccC
Confidence 9999872 122 566677777 9999999999996
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.5e-10 Score=98.20 Aligned_cols=98 Identities=16% Similarity=0.172 Sum_probs=75.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCC-CcEEEEEeCCcc-cc-------cccCCceEEEEccCCCHHHHHHhhc------
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRN-AM-------ESFGTYVESMAGDASNKKFLKTALR------ 162 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G-~~VralvR~~~~-a~-------~~~g~~vevV~GDl~D~~sL~~AL~------ 162 (198)
..++||||||||.||++++++|+++| ++|.+++|++++ .. ...+.+++++.+|++|++++.++++
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g 86 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGG 86 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcC
Confidence 45689999999999999999999995 999999998765 21 1112368999999999998665553
Q ss_pred CccEEEEcC-----------h-------------h------HHHHHHHhCCCCeEEEEcccce
Q 029118 163 GVRSIICPS-----------E-------------G------FISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 163 GvDaVIh~a-----------~-------------G------~lldAA~~~GVkRiV~vSS~~V 195 (198)
++|.+|+++ . + .+++++++.+..+||++||...
T Consensus 87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g 149 (253)
T PRK07904 87 DVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAG 149 (253)
T ss_pred CCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhh
Confidence 689998751 0 0 0456677788899999999754
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.1e-10 Score=96.38 Aligned_cols=96 Identities=8% Similarity=0.102 Sum_probs=72.9
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCcEEEEEeC-Cccccc---cc----C-CceEEEEccCCCHHHHHHhhc-------Cc
Q 029118 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-KRNAME---SF----G-TYVESMAGDASNKKFLKTALR-------GV 164 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~-~~~a~~---~~----g-~~vevV~GDl~D~~sL~~AL~-------Gv 164 (198)
+++||||+|+||+++++.|+++|++|+++.|+ .+.... .+ + ..+..+++|++|++++.++++ ++
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 80 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL 80 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 48999999999999999999999999999997 432211 11 1 124468899999999877764 67
Q ss_pred cEEEEcC-------------hh---------------H--HHHHHHhCCCCeEEEEccccee
Q 029118 165 RSIICPS-------------EG---------------F--ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 165 DaVIh~a-------------~G---------------~--lldAA~~~GVkRiV~vSS~~Vy 196 (198)
|.|||++ +. + +++++++.+.++||++||...+
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~ 142 (251)
T PRK07069 81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAF 142 (251)
T ss_pred cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhc
Confidence 9999982 00 0 4566677788999999997654
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=8.9e-11 Score=98.73 Aligned_cols=73 Identities=16% Similarity=0.210 Sum_probs=61.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-----cCCceEEEEccCCCHHHHHHhhc------CccE
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTALR------GVRS 166 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-----~g~~vevV~GDl~D~~sL~~AL~------GvDa 166 (198)
.++++|||||+|+||++++++|+++|++|.+++|++++.... .+.+++++.+|++|++.+.++++ .+|+
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~ 83 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINV 83 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCE
Confidence 457899999999999999999999999999999987654222 23468899999999998887654 5799
Q ss_pred EEEc
Q 029118 167 IICP 170 (198)
Q Consensus 167 VIh~ 170 (198)
|||+
T Consensus 84 lv~~ 87 (263)
T PRK09072 84 LINN 87 (263)
T ss_pred EEEC
Confidence 9997
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.4e-10 Score=98.22 Aligned_cols=73 Identities=16% Similarity=0.205 Sum_probs=60.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cCCceEEEEccCCCHHHHHHhhc-------Cc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~AL~-------Gv 164 (198)
.+++++||||+|+||++++++|+++|++|.++.|+.+..... .+.++.++++|++|++.+.++++ .+
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 88 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPC 88 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 467899999999999999999999999999999986543211 23457889999999998887764 68
Q ss_pred cEEEEc
Q 029118 165 RSIICP 170 (198)
Q Consensus 165 DaVIh~ 170 (198)
|.|||+
T Consensus 89 d~li~~ 94 (278)
T PRK08277 89 DILING 94 (278)
T ss_pred CEEEEC
Confidence 999986
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.1e-10 Score=95.35 Aligned_cols=94 Identities=18% Similarity=0.280 Sum_probs=71.1
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCc-ccc------cccCCceEEEEccCCCHHHHHHhhcC-------ccEE
Q 029118 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-NAM------ESFGTYVESMAGDASNKKFLKTALRG-------VRSI 167 (198)
Q Consensus 102 ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~-~a~------~~~g~~vevV~GDl~D~~sL~~AL~G-------vDaV 167 (198)
+||||++|+||++++++|+++|++|+++.|+.. ... ...+..+.++.+|++|++++.+++++ +|+|
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL 80 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 589999999999999999999999999998752 111 11233578999999999999888764 5999
Q ss_pred EEcC-------------h-----------hH--HHHHHH----hCCCCeEEEEcccce
Q 029118 168 ICPS-------------E-----------GF--ISNAGS----LKGVQHVILLSQGAV 195 (198)
Q Consensus 168 Ih~a-------------~-----------G~--lldAA~----~~GVkRiV~vSS~~V 195 (198)
||.+ . +. +++++. +.+.++||++||.+.
T Consensus 81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~ 138 (239)
T TIGR01830 81 VNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVG 138 (239)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccc
Confidence 9971 0 01 344443 367889999999643
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=7.5e-11 Score=96.69 Aligned_cols=95 Identities=17% Similarity=0.250 Sum_probs=74.7
Q ss_pred EEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc---c--CCceEEEEccCCCHHHHHHhhcC---ccEEEEcC---
Q 029118 103 LVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F--GTYVESMAGDASNKKFLKTALRG---VRSIICPS--- 171 (198)
Q Consensus 103 LVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~---~--g~~vevV~GDl~D~~sL~~AL~G---vDaVIh~a--- 171 (198)
|||||+|+||++++++|+++|++|+++.|+++..... . +.+++++.+|++|++++.++++. +|.+||.+
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~~ 80 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAADT 80 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCCC
Confidence 6999999999999999999999999999986543221 1 35688999999999999999864 69999972
Q ss_pred -h--------------------hH--HHHHHHhCCCCeEEEEcccceec
Q 029118 172 -E--------------------GF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 -~--------------------G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
. +. ++++....+..+||++||.+.+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~ 129 (230)
T PRK07041 81 PGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVR 129 (230)
T ss_pred CCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcC
Confidence 0 00 34444555678999999987653
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.6e-10 Score=96.52 Aligned_cols=99 Identities=13% Similarity=0.112 Sum_probs=75.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
..++++|||||+|+||++++++|+++|++|.+..|++++.... .+..+.++.+|++|++++.++++ .
T Consensus 7 l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 86 (254)
T PRK08085 7 LAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGP 86 (254)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence 3567899999999999999999999999999999986543211 13457789999999999988774 4
Q ss_pred ccEEEEcC-------------h-----------hH--H----HHHHHhCCCCeEEEEcccce
Q 029118 164 VRSIICPS-------------E-----------GF--I----SNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 164 vDaVIh~a-------------~-----------G~--l----ldAA~~~GVkRiV~vSS~~V 195 (198)
+|.|||++ . +. + +..+++.+..+||++||...
T Consensus 87 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~ 148 (254)
T PRK08085 87 IDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQS 148 (254)
T ss_pred CCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchh
Confidence 79999972 0 11 2 23344567789999999643
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.4e-10 Score=99.67 Aligned_cols=74 Identities=16% Similarity=0.131 Sum_probs=61.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
..++++|||||+|+||++++++|+++|++|.+..|+++...+. .+..+.++..|++|++++.++++ .
T Consensus 4 ~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 83 (275)
T PRK05876 4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGH 83 (275)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 4567899999999999999999999999999999886543211 23457889999999999988875 4
Q ss_pred ccEEEEc
Q 029118 164 VRSIICP 170 (198)
Q Consensus 164 vDaVIh~ 170 (198)
+|.|||+
T Consensus 84 id~li~n 90 (275)
T PRK05876 84 VDVVFSN 90 (275)
T ss_pred CCEEEEC
Confidence 6999997
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=2.4e-10 Score=94.61 Aligned_cols=97 Identities=14% Similarity=0.177 Sum_probs=72.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeC-Ccccc----c--ccCCceEEEEccCCCHHHHHHhhc-------Cc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-KRNAM----E--SFGTYVESMAGDASNKKFLKTALR-------GV 164 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~-~~~a~----~--~~g~~vevV~GDl~D~~sL~~AL~-------Gv 164 (198)
++++|||||||+||++++++|+++|++|.++.+. ..... + ..+..+.++.+|++|.+.+.++++ .+
T Consensus 3 ~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 82 (246)
T PRK12938 3 QRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGEI 82 (246)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 5789999999999999999999999999886543 22211 1 123356778999999999888774 67
Q ss_pred cEEEEcC----h--------------------hH------HHHHHHhCCCCeEEEEcccce
Q 029118 165 RSIICPS----E--------------------GF------ISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 165 DaVIh~a----~--------------------G~------lldAA~~~GVkRiV~vSS~~V 195 (198)
|+|||++ . +. +++.+++.+..|||++||...
T Consensus 83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~ 143 (246)
T PRK12938 83 DVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNG 143 (246)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhc
Confidence 9999982 0 10 345556778899999999643
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.6e-10 Score=96.75 Aligned_cols=99 Identities=16% Similarity=0.217 Sum_probs=75.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc-ccccCCceEEEEccCCCHHHHHHhhc-------CccEEEE
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-MESFGTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a-~~~~g~~vevV~GDl~D~~sL~~AL~-------GvDaVIh 169 (198)
.+++++||||+|+||++++++|+++|++|.++.|+.... ......++.++.+|++|++++.++++ .+|.|||
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~ 85 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVN 85 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 457899999999999999999999999999887654332 12212247899999999999988875 5799999
Q ss_pred cC------------------------hhH------HHHHHHhCCCCeEEEEccccee
Q 029118 170 PS------------------------EGF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 170 ~a------------------------~G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
++ .+. +++.+++.+..+||++||...+
T Consensus 86 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~ 142 (255)
T PRK06463 86 NAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGI 142 (255)
T ss_pred CCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhC
Confidence 72 011 3444555677899999997654
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=99.19 E-value=4.1e-11 Score=104.66 Aligned_cols=81 Identities=16% Similarity=0.201 Sum_probs=66.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcC--ccEEEEcC------
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG--VRSIICPS------ 171 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~G--vDaVIh~a------ 171 (198)
|+||||||+|++|++++++|..+|++|.++.|+ ..|++|.+.+.+.++. .|+|||++
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~---------------~~dl~d~~~~~~~~~~~~pd~Vin~aa~~~~~ 65 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGYEVIATSRS---------------DLDLTDPEAVAKLLEAFKPDVVINCAAYTNVD 65 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT---------------CS-TTSHHHHHHHHHHH--SEEEE------HH
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch---------------hcCCCCHHHHHHHHHHhCCCeEeccceeecHH
Confidence 689999999999999999999999999999665 5789999999999875 69999982
Q ss_pred --------------hh--HHHHHHHhCCCCeEEEEccccee
Q 029118 172 --------------EG--FISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 172 --------------~G--~lldAA~~~GVkRiV~vSS~~Vy 196 (198)
.+ .++++|.+.|+ |+||+||..||
T Consensus 66 ~ce~~p~~a~~iN~~~~~~la~~~~~~~~-~li~~STd~VF 105 (286)
T PF04321_consen 66 ACEKNPEEAYAINVDATKNLAEACKERGA-RLIHISTDYVF 105 (286)
T ss_dssp HHHHSHHHHHHHHTHHHHHHHHHHHHCT--EEEEEEEGGGS
T ss_pred hhhhChhhhHHHhhHHHHHHHHHHHHcCC-cEEEeeccEEE
Confidence 01 27788888885 99999999887
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.8e-10 Score=96.34 Aligned_cols=100 Identities=12% Similarity=0.168 Sum_probs=76.1
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------c--CCceEEEEccCCCHHHHHHhhc------
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------F--GTYVESMAGDASNKKFLKTALR------ 162 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~--g~~vevV~GDl~D~~sL~~AL~------ 162 (198)
..++++|||||+|.||++++++|.++|++|.++.|+.+..... . +..+.++.+|++|++++.++++
T Consensus 7 ~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 86 (257)
T PRK09242 7 LDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHW 86 (257)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 3467999999999999999999999999999999987553211 1 3457889999999988776664
Q ss_pred -CccEEEEcC-------------h-----------hH--HHHH----HHhCCCCeEEEEccccee
Q 029118 163 -GVRSIICPS-------------E-----------GF--ISNA----GSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 163 -GvDaVIh~a-------------~-----------G~--lldA----A~~~GVkRiV~vSS~~Vy 196 (198)
.+|+|||++ + +. ++++ +++.+..+||++||.+.+
T Consensus 87 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~ 151 (257)
T PRK09242 87 DGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGL 151 (257)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccC
Confidence 579999982 0 11 3333 345677899999997654
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.2e-10 Score=97.44 Aligned_cols=73 Identities=15% Similarity=0.196 Sum_probs=61.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc---ccCCceEEEEccCCCHHHHHHhhc-------CccEE
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~---~~g~~vevV~GDl~D~~sL~~AL~-------GvDaV 167 (198)
..+++|||||+|+||++++++|+++|++|.++.|+.+.... ..+..++++.+|++|++++.++++ .+|+|
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 84 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDIL 84 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 35689999999999999999999999999999998764322 234468899999999999988876 57999
Q ss_pred EEc
Q 029118 168 ICP 170 (198)
Q Consensus 168 Ih~ 170 (198)
||+
T Consensus 85 i~~ 87 (257)
T PRK07067 85 FNN 87 (257)
T ss_pred EEC
Confidence 997
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=2.3e-10 Score=94.78 Aligned_cols=98 Identities=17% Similarity=0.168 Sum_probs=72.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeC-Cccccc------ccCCceEEEEccCCCHHHHHHhhcC-------
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-KRNAME------SFGTYVESMAGDASNKKFLKTALRG------- 163 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~-~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~G------- 163 (198)
..+++|||||+|+||++++++|+++|++|.++.++ +....+ ..+..+.++..|++|++++.++++.
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGK 84 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 45799999999999999999999999999876653 322211 1234588899999999999988865
Q ss_pred ccEEEEcC-------------h-----------hH--HHHHHH----hCCCCeEEEEcccce
Q 029118 164 VRSIICPS-------------E-----------GF--ISNAGS----LKGVQHVILLSQGAV 195 (198)
Q Consensus 164 vDaVIh~a-------------~-----------G~--lldAA~----~~GVkRiV~vSS~~V 195 (198)
+|+|||++ . +. +++++. +.+..+||++||...
T Consensus 85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~ 146 (247)
T PRK12935 85 VDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIG 146 (247)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhh
Confidence 69999982 0 11 334433 355679999999744
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=99.17 E-value=2e-10 Score=95.85 Aligned_cols=72 Identities=17% Similarity=0.233 Sum_probs=60.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhc-------Ccc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GVR 165 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~-------GvD 165 (198)
++++|||||+|+||++++++|+++|++|+++.|+++.... ..+..+.++++|++|++++.++++ ++|
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 81 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN 81 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4689999999999999999999999999999998754321 123467889999999999888775 579
Q ss_pred EEEEc
Q 029118 166 SIICP 170 (198)
Q Consensus 166 aVIh~ 170 (198)
.|||+
T Consensus 82 ~vi~~ 86 (256)
T PRK08643 82 VVVNN 86 (256)
T ss_pred EEEEC
Confidence 99997
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=3.2e-10 Score=93.36 Aligned_cols=73 Identities=12% Similarity=0.167 Sum_probs=60.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc-c------cccCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-M------ESFGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a-~------~~~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
+.+++|||||+|+||++++++|+++|++|.++.|+.... . ...+..+.++..|++|++++.++++ +
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGR 83 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 457899999999999999999999999998887754321 1 1124568899999999999999886 6
Q ss_pred ccEEEEc
Q 029118 164 VRSIICP 170 (198)
Q Consensus 164 vDaVIh~ 170 (198)
+|+|||+
T Consensus 84 id~vi~~ 90 (245)
T PRK12937 84 IDVLVNN 90 (245)
T ss_pred CCEEEEC
Confidence 8999997
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=2e-10 Score=95.49 Aligned_cols=75 Identities=15% Similarity=0.148 Sum_probs=63.0
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cCCceEEEEccCCCHHHHHHhhc-------
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------- 162 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~AL~------- 162 (198)
+...++||||||+|+||++++++|.++|++|+++.|++++.... .+.+++++.+|++|++++.++++
T Consensus 6 ~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 85 (258)
T PRK06949 6 NLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAG 85 (258)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 34568999999999999999999999999999999987654221 13458899999999999998876
Q ss_pred CccEEEEc
Q 029118 163 GVRSIICP 170 (198)
Q Consensus 163 GvDaVIh~ 170 (198)
.+|.|||+
T Consensus 86 ~~d~li~~ 93 (258)
T PRK06949 86 TIDILVNN 93 (258)
T ss_pred CCCEEEEC
Confidence 57999997
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=2.8e-10 Score=96.00 Aligned_cols=97 Identities=11% Similarity=0.087 Sum_probs=76.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhc-------Cc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GV 164 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~-------Gv 164 (198)
.++++|||||+|.||++++++|+++|++|.++.|++++... ..+.++.++++|++|++++.++++ .+
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVI 88 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 45789999999999999999999999999999988754321 123468899999999999988874 47
Q ss_pred cEEEEcC-------------h-----------hH------HHHHHHhCCCCeEEEEcccc
Q 029118 165 RSIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQGA 194 (198)
Q Consensus 165 DaVIh~a-------------~-----------G~------lldAA~~~GVkRiV~vSS~~ 194 (198)
|+|||++ . +. ++..+++.+..+||++||..
T Consensus 89 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~ 148 (265)
T PRK07097 89 DILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMM 148 (265)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCcc
Confidence 9999972 0 10 33445566789999999963
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=2.6e-10 Score=95.78 Aligned_cols=100 Identities=13% Similarity=0.165 Sum_probs=76.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-------c-CCceEEEEccCCCHHHHHHhhc------
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------F-GTYVESMAGDASNKKFLKTALR------ 162 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-------~-g~~vevV~GDl~D~~sL~~AL~------ 162 (198)
..++++|||||+|.||++++++|+++|++|.++.|++++.... . +..+.++.+|++|++++.++++
T Consensus 6 l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 85 (265)
T PRK07062 6 LEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARF 85 (265)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhc
Confidence 3467899999999999999999999999999999987543211 1 2357789999999999877653
Q ss_pred -CccEEEEcC-------------h-----------hH------HHHHHHhCCCCeEEEEccccee
Q 029118 163 -GVRSIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 163 -GvDaVIh~a-------------~-----------G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
.+|.|||++ . +. ++..+++.+..+||++||...+
T Consensus 86 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 150 (265)
T PRK07062 86 GGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLAL 150 (265)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEecccccc
Confidence 579999972 0 00 3344556667899999997543
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.15 E-value=4.3e-10 Score=95.77 Aligned_cols=98 Identities=17% Similarity=0.132 Sum_probs=74.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
..++++|||||+|+||++++++|+++|++|.++.|+ +.... ..+.++.++.+|++|++++.++++ .
T Consensus 4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 82 (272)
T PRK08589 4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGR 82 (272)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence 456799999999999999999999999999999998 33211 123458899999999999887764 4
Q ss_pred ccEEEEcC----h---------------------hH------HHHHHHhCCCCeEEEEccccee
Q 029118 164 VRSIICPS----E---------------------GF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 164 vDaVIh~a----~---------------------G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
+|.+||++ . +. ++..+++.+ .+||++||...+
T Consensus 83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~ 145 (272)
T PRK08589 83 VDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQ 145 (272)
T ss_pred cCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhc
Confidence 79999872 0 00 234455556 799999997554
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=99.15 E-value=3.6e-10 Score=95.86 Aligned_cols=75 Identities=13% Similarity=0.133 Sum_probs=62.2
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc---cc--CCceEEEEccCCCHHHHHHhhc-------C
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SF--GTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~---~~--g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
...++++|||||+|+||++++++|+++|++|.++.|+.+.... .. +.+++++++|++|++++.++++ .
T Consensus 15 ~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~ 94 (280)
T PLN02253 15 RLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGT 94 (280)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 3456789999999999999999999999999999987643321 11 2358899999999999998886 6
Q ss_pred ccEEEEc
Q 029118 164 VRSIICP 170 (198)
Q Consensus 164 vDaVIh~ 170 (198)
+|.|||+
T Consensus 95 id~li~~ 101 (280)
T PLN02253 95 LDIMVNN 101 (280)
T ss_pred CCEEEEC
Confidence 8999997
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=3.6e-10 Score=94.78 Aligned_cols=99 Identities=18% Similarity=0.204 Sum_probs=75.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc-c------cccCCceEEEEccCCCHHHHHHhhcC------
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-M------ESFGTYVESMAGDASNKKFLKTALRG------ 163 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a-~------~~~g~~vevV~GDl~D~~sL~~AL~G------ 163 (198)
...+++|||||+|+||++++++|+++|++|.++.|+.+.. . ...+..+.++.+|++|++++.++++.
T Consensus 6 ~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g 85 (254)
T PRK06114 6 LDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELG 85 (254)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 3467999999999999999999999999999999875421 1 11234578899999999999887754
Q ss_pred -ccEEEEcC-------------h-----------hH------HHHHHHhCCCCeEEEEcccce
Q 029118 164 -VRSIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 164 -vDaVIh~a-------------~-----------G~------lldAA~~~GVkRiV~vSS~~V 195 (198)
+|.|||++ . +. ++..+++.+-.+||++||.+.
T Consensus 86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~ 148 (254)
T PRK06114 86 ALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSG 148 (254)
T ss_pred CCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhh
Confidence 59999972 0 11 234455667789999998653
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=5.5e-10 Score=91.85 Aligned_cols=71 Identities=15% Similarity=0.153 Sum_probs=59.0
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCH-HHHHHhhcCccEEEEc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK-KFLKTALRGVRSIICP 170 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~-~sL~~AL~GvDaVIh~ 170 (198)
..+++++||||+|+||++++++|+++|++|.++.|++... ...++.++.+|++|+ +.+.+.+..+|+|||+
T Consensus 3 l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~id~lv~~ 74 (235)
T PRK06550 3 FMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD---LSGNFHFLQLDLSDDLEPLFDWVPSVDILCNT 74 (235)
T ss_pred CCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc---cCCcEEEEECChHHHHHHHHHhhCCCCEEEEC
Confidence 3457899999999999999999999999999999876542 234688999999998 5555566788999987
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=4.7e-10 Score=93.40 Aligned_cols=99 Identities=11% Similarity=0.138 Sum_probs=76.0
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
...+++|||||+|+||.+++++|+++|++|.++.|+.++.... .+..+.+++.|+.|.+++.++++ .
T Consensus 6 l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 85 (252)
T PRK07035 6 LTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGR 85 (252)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4567899999999999999999999999999999986543211 23457889999999999887764 4
Q ss_pred ccEEEEcCh-------------------------hH------HHHHHHhCCCCeEEEEcccce
Q 029118 164 VRSIICPSE-------------------------GF------ISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 164 vDaVIh~a~-------------------------G~------lldAA~~~GVkRiV~vSS~~V 195 (198)
+|.|||++. +. +++.+++.+..+||++||...
T Consensus 86 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~ 148 (252)
T PRK07035 86 LDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNG 148 (252)
T ss_pred CCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhh
Confidence 799998720 11 234456677899999999643
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.14 E-value=3.6e-10 Score=86.43 Aligned_cols=96 Identities=22% Similarity=0.277 Sum_probs=73.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCccccc---------ccCCceEEEEccCCCHHHHHHhhcC------
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAME---------SFGTYVESMAGDASNKKFLKTALRG------ 163 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~~---------~~g~~vevV~GDl~D~~sL~~AL~G------ 163 (198)
++++||||+|+||.+++++|+++|+ .|.++.|++.+... ..+..+.++..|+++++.+.++++.
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG 80 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4699999999999999999999996 57777887644321 1244678899999999988887654
Q ss_pred -ccEEEEcC-------------h-----------hH--HHHHHHhCCCCeEEEEcccce
Q 029118 164 -VRSIICPS-------------E-----------GF--ISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 164 -vDaVIh~a-------------~-----------G~--lldAA~~~GVkRiV~vSS~~V 195 (198)
+|.|||.+ . +. +++++++.+.+++|++||.+.
T Consensus 81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~ 139 (180)
T smart00822 81 PLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAG 139 (180)
T ss_pred CeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHH
Confidence 59999872 0 11 567777888999999999643
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=3.1e-10 Score=107.39 Aligned_cols=100 Identities=14% Similarity=0.162 Sum_probs=79.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cCCceEEEEccCCCHHHHHHhhc-------Cc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~AL~-------Gv 164 (198)
.++++|||||||+||++++++|+++|++|.++.|+++...+. .+..+.++.+|++|++++.++++ ++
T Consensus 370 ~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 449 (657)
T PRK07201 370 VGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHV 449 (657)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 357899999999999999999999999999999987653211 23468899999999999998886 68
Q ss_pred cEEEEcC-h--------------h-----------H------HHHHHHhCCCCeEEEEcccceec
Q 029118 165 RSIICPS-E--------------G-----------F------ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 165 DaVIh~a-~--------------G-----------~------lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
|.|||++ . . . ++..+++.+..+||++||.+++.
T Consensus 450 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~ 514 (657)
T PRK07201 450 DYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQT 514 (657)
T ss_pred CEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcC
Confidence 9999972 0 0 0 23445667889999999987763
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=5.6e-10 Score=92.29 Aligned_cols=72 Identities=15% Similarity=0.158 Sum_probs=57.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc-cc------cccCCceEEEEccCCCHHHHHHhhc-------Cc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AM------ESFGTYVESMAGDASNKKFLKTALR-------GV 164 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~-a~------~~~g~~vevV~GDl~D~~sL~~AL~-------Gv 164 (198)
.++||||||+|+||++++++|+++|++|++.+|+... .. ...+..+.++..|++|++.+.++++ ++
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 85 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGVA 85 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCCC
Confidence 5689999999999999999999999999888865321 11 1123456788999999998887764 67
Q ss_pred cEEEEc
Q 029118 165 RSIICP 170 (198)
Q Consensus 165 DaVIh~ 170 (198)
|+|||+
T Consensus 86 d~vi~~ 91 (252)
T PRK06077 86 DILVNN 91 (252)
T ss_pred CEEEEC
Confidence 999997
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.8e-10 Score=94.75 Aligned_cols=72 Identities=18% Similarity=0.219 Sum_probs=57.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEE-EeCCccccc------ccCCceEEEEccCCCHHHHHHhhcC-------c
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAME------SFGTYVESMAGDASNKKFLKTALRG-------V 164 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~Vral-vR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~G-------v 164 (198)
++++|||||+|+||++++++|+++|++|+++ .|++++..+ ..+..+.++.+|++|++++.++++. +
T Consensus 1 ~~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~i 80 (247)
T PRK09730 1 MAIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPL 80 (247)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence 3579999999999999999999999999875 455543221 1234578899999999999988864 4
Q ss_pred cEEEEc
Q 029118 165 RSIICP 170 (198)
Q Consensus 165 DaVIh~ 170 (198)
|.|||.
T Consensus 81 d~vi~~ 86 (247)
T PRK09730 81 AALVNN 86 (247)
T ss_pred CEEEEC
Confidence 799987
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.9e-10 Score=94.80 Aligned_cols=71 Identities=23% Similarity=0.190 Sum_probs=59.2
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc--cCCceEEEEccCCCHHHHHHhhcCc----cEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--FGTYVESMAGDASNKKFLKTALRGV----RSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~--~g~~vevV~GDl~D~~sL~~AL~Gv----DaVIh~ 170 (198)
++++||||||+||++++++|+++|++|.++.|+++...+. ...++.++++|++|+++++++++.+ |.+||.
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ 78 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIFN 78 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEc
Confidence 5799999999999999999999999999999987654322 1245889999999999999998764 666654
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=4.3e-10 Score=95.10 Aligned_cols=74 Identities=23% Similarity=0.298 Sum_probs=62.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc---cccCCceEEEEccCCCHHHHHHhhc-------CccE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~---~~~g~~vevV~GDl~D~~sL~~AL~-------GvDa 166 (198)
..++++|||||||.||++++++|+++|++|.++.|++++.. ...+..+.++++|++|.+++.++++ .+|.
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 83 (261)
T PRK08265 4 LAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDI 83 (261)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 34679999999999999999999999999999999875432 2234568899999999999988775 4699
Q ss_pred EEEc
Q 029118 167 IICP 170 (198)
Q Consensus 167 VIh~ 170 (198)
+||+
T Consensus 84 lv~~ 87 (261)
T PRK08265 84 LVNL 87 (261)
T ss_pred EEEC
Confidence 9987
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=99.12 E-value=4.1e-10 Score=93.45 Aligned_cols=71 Identities=21% Similarity=0.227 Sum_probs=59.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhc-------CccE
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~-------GvDa 166 (198)
++++||||+|+||.+++++|+++|++|.++.|+...... ..+.++.++.+|++|++++.++++ .+|.
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 80 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV 80 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 479999999999999999999999999999988643211 124468899999999999988764 5699
Q ss_pred EEEc
Q 029118 167 IICP 170 (198)
Q Consensus 167 VIh~ 170 (198)
|||+
T Consensus 81 vi~~ 84 (254)
T TIGR02415 81 MVNN 84 (254)
T ss_pred EEEC
Confidence 9997
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=4.1e-10 Score=93.50 Aligned_cols=65 Identities=15% Similarity=0.248 Sum_probs=53.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc-cc---cccCCceEEEEccCCCHHHHHHhhcC
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AM---ESFGTYVESMAGDASNKKFLKTALRG 163 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~-a~---~~~g~~vevV~GDl~D~~sL~~AL~G 163 (198)
++++|||||+|+||+.++++|+++|++|.++.|++.+ .. ...+.+++++++|++|+++++++++.
T Consensus 1 ~k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 69 (251)
T PRK06924 1 MRYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNE 69 (251)
T ss_pred CcEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHH
Confidence 3589999999999999999999999999999998732 11 12245688999999999999888754
|
|
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=3.1e-10 Score=94.00 Aligned_cols=90 Identities=14% Similarity=0.097 Sum_probs=72.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc---c--CCceEEEEccCCCHHHHHHhhcC-------ccEE
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F--GTYVESMAGDASNKKFLKTALRG-------VRSI 167 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~---~--g~~vevV~GDl~D~~sL~~AL~G-------vDaV 167 (198)
|+++|||||||+|. +++.|.++|++|+++.|+++..... . +..++++.+|++|++++.+++++ .|.+
T Consensus 1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~l 79 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLA 79 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEE
Confidence 47999999999886 9999999999999999987654321 1 24688899999999999988853 4666
Q ss_pred EEc--C--hhHHHHHHHhCCCC----eEEEE
Q 029118 168 ICP--S--EGFISNAGSLKGVQ----HVILL 190 (198)
Q Consensus 168 Ih~--a--~G~lldAA~~~GVk----RiV~v 190 (198)
|+. . ...+..+|++.||+ |||++
T Consensus 80 v~~vh~~~~~~~~~~~~~~gv~~~~~~~~h~ 110 (177)
T PRK08309 80 VAWIHSSAKDALSVVCRELDGSSETYRLFHV 110 (177)
T ss_pred EEeccccchhhHHHHHHHHccCCCCceEEEE
Confidence 654 2 33499999999999 99997
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=5.6e-10 Score=93.50 Aligned_cols=98 Identities=13% Similarity=0.183 Sum_probs=74.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc---c--ccCCceEEEEccCCCHHHHHHhhc-------Ccc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---E--SFGTYVESMAGDASNKKFLKTALR-------GVR 165 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~---~--~~g~~vevV~GDl~D~~sL~~AL~-------GvD 165 (198)
.+++++||||+|+||++++++|+++|++|.++.|+..... . ..+..+.++.+|++|++++.++++ .+|
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id 84 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRID 84 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4679999999999999999999999999999998763211 1 123457889999999999988875 569
Q ss_pred EEEEcC-------------h-----------hH--HHHH----HHhCCCCeEEEEcccce
Q 029118 166 SIICPS-------------E-----------GF--ISNA----GSLKGVQHVILLSQGAV 195 (198)
Q Consensus 166 aVIh~a-------------~-----------G~--lldA----A~~~GVkRiV~vSS~~V 195 (198)
.|||++ . +. ++++ +++.+..+||++||...
T Consensus 85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~ 144 (263)
T PRK08226 85 ILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTG 144 (263)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHh
Confidence 999972 0 11 3333 33556789999998543
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=6.1e-10 Score=91.65 Aligned_cols=72 Identities=14% Similarity=0.132 Sum_probs=60.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhh---c--CccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL---R--GVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL---~--GvDaVIh~ 170 (198)
+++++||||+|+||++++++|+++|++|++++|++++..+....+++++.+|++|++.+++++ . .+|.|||+
T Consensus 1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ 77 (222)
T PRK06953 1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQALGAEALALDVADPASVAGLAWKLDGEALDAAVYV 77 (222)
T ss_pred CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEEC
Confidence 368999999999999999999999999999999876654433345789999999999998864 3 47999997
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=6.7e-10 Score=93.19 Aligned_cols=74 Identities=18% Similarity=0.272 Sum_probs=59.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCc-ccc------cccCCceEEEEccCCCHHHHHHhhc-------
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-NAM------ESFGTYVESMAGDASNKKFLKTALR------- 162 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~-~a~------~~~g~~vevV~GDl~D~~sL~~AL~------- 162 (198)
..++++|||||+|+||++++++|+++|++|++++|+.. ... ...+..++++.+|++|.+++.++++
T Consensus 7 ~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 86 (258)
T PRK09134 7 AAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALG 86 (258)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 34678999999999999999999999999999877532 211 1124568899999999999988875
Q ss_pred CccEEEEc
Q 029118 163 GVRSIICP 170 (198)
Q Consensus 163 GvDaVIh~ 170 (198)
++|.|||+
T Consensus 87 ~iD~vi~~ 94 (258)
T PRK09134 87 PITLLVNN 94 (258)
T ss_pred CCCEEEEC
Confidence 47999998
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=1e-09 Score=92.30 Aligned_cols=73 Identities=12% Similarity=0.188 Sum_probs=62.1
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc-------CccEE
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~-------GvDaV 167 (198)
.+..++++|||||+|+||++++++|+++|++|.++.|++.... ...+.++..|++|+++++++++ .+|.|
T Consensus 5 ~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 81 (266)
T PRK06171 5 LNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ---HENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGL 81 (266)
T ss_pred ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc---cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 3456789999999999999999999999999999998876542 2358899999999999988765 57999
Q ss_pred EEc
Q 029118 168 ICP 170 (198)
Q Consensus 168 Ih~ 170 (198)
||+
T Consensus 82 i~~ 84 (266)
T PRK06171 82 VNN 84 (266)
T ss_pred EEC
Confidence 996
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=4.9e-10 Score=95.08 Aligned_cols=74 Identities=12% Similarity=0.147 Sum_probs=60.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
...+++|||||+|+||++++++|+++|++|+++.|+++.... ..+.++.++.+|++|++++.++++ +
T Consensus 7 ~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~ 86 (264)
T PRK07576 7 FAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGP 86 (264)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 456799999999999999999999999999999998654321 123457889999999999988775 4
Q ss_pred ccEEEEc
Q 029118 164 VRSIICP 170 (198)
Q Consensus 164 vDaVIh~ 170 (198)
+|.|||+
T Consensus 87 iD~vi~~ 93 (264)
T PRK07576 87 IDVLVSG 93 (264)
T ss_pred CCEEEEC
Confidence 6999986
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=7.3e-10 Score=92.57 Aligned_cols=72 Identities=15% Similarity=0.258 Sum_probs=59.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-------cC-CceEEEEccCCCHHHHHHhhc-------C
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FG-TYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-------~g-~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
+++||||||+|+||++++++|.++|++|.++.|+....... .+ ..++++.+|++|.+.+..+++ .
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 81 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR 81 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 35799999999999999999999999999999886533211 12 358899999999999887764 5
Q ss_pred ccEEEEc
Q 029118 164 VRSIICP 170 (198)
Q Consensus 164 vDaVIh~ 170 (198)
+|+|||+
T Consensus 82 id~vv~~ 88 (259)
T PRK12384 82 VDLLVYN 88 (259)
T ss_pred CCEEEEC
Confidence 7999997
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=6.1e-10 Score=91.93 Aligned_cols=73 Identities=16% Similarity=0.220 Sum_probs=59.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc---cccCCceEEEEccCCCHHHHHHhh-------cCccEE
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTAL-------RGVRSI 167 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~---~~~g~~vevV~GDl~D~~sL~~AL-------~GvDaV 167 (198)
.+++++||||+|+||++++++|+++|++|.++.|+.+... ...+..+.++++|++|.+.+..++ ..+|+|
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAV 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4578999999999999999999999999999999865432 223456788999999988776554 368999
Q ss_pred EEc
Q 029118 168 ICP 170 (198)
Q Consensus 168 Ih~ 170 (198)
||+
T Consensus 85 i~~ 87 (249)
T PRK06500 85 FIN 87 (249)
T ss_pred EEC
Confidence 997
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=9.3e-10 Score=95.40 Aligned_cols=75 Identities=24% Similarity=0.335 Sum_probs=60.8
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc-c------cccCCceEEEEccCCCHHHHHHhhc------
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-M------ESFGTYVESMAGDASNKKFLKTALR------ 162 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a-~------~~~g~~vevV~GDl~D~~sL~~AL~------ 162 (198)
...++++|||||+|+||++++++|+++|++|.++.|+.... . ...+..+.++.+|++|.+.+.++++
T Consensus 43 ~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~ 122 (290)
T PRK06701 43 KLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVREL 122 (290)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 44467899999999999999999999999999998875321 1 1123457889999999999988774
Q ss_pred -CccEEEEc
Q 029118 163 -GVRSIICP 170 (198)
Q Consensus 163 -GvDaVIh~ 170 (198)
.+|+|||+
T Consensus 123 ~~iD~lI~~ 131 (290)
T PRK06701 123 GRLDILVNN 131 (290)
T ss_pred CCCCEEEEC
Confidence 57999987
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.1e-09 Score=91.41 Aligned_cols=74 Identities=11% Similarity=0.185 Sum_probs=61.1
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCc-EEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhc-------
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR------- 162 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~-VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~------- 162 (198)
...++++||||+|+||++++++|+++|++ |.++.|++++... ..+..+.++.+|++|++++.++++
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 83 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFG 83 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 34678999999999999999999999999 9999987654321 124467889999999999888775
Q ss_pred CccEEEEc
Q 029118 163 GVRSIICP 170 (198)
Q Consensus 163 GvDaVIh~ 170 (198)
++|.|||+
T Consensus 84 ~id~li~~ 91 (260)
T PRK06198 84 RLDALVNA 91 (260)
T ss_pred CCCEEEEC
Confidence 57999998
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=5.9e-10 Score=93.60 Aligned_cols=72 Identities=24% Similarity=0.188 Sum_probs=58.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc-cc------cccCCceEEEEccCCCHHHHHHhhc-------Cc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AM------ESFGTYVESMAGDASNKKFLKTALR-------GV 164 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~-a~------~~~g~~vevV~GDl~D~~sL~~AL~-------Gv 164 (198)
++++|||||+|+||++++++|+++|++|.++.|+... .. ...+..++++.+|++|+++++++++ .+
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI 81 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4589999999999999999999999999988764432 11 1134568999999999999888775 57
Q ss_pred cEEEEc
Q 029118 165 RSIICP 170 (198)
Q Consensus 165 DaVIh~ 170 (198)
|+|||+
T Consensus 82 d~li~~ 87 (256)
T PRK12743 82 DVLVNN 87 (256)
T ss_pred CEEEEC
Confidence 999997
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.10 E-value=5.9e-10 Score=102.22 Aligned_cols=100 Identities=18% Similarity=0.224 Sum_probs=76.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhc-------Cc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GV 164 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~-------Gv 164 (198)
..+++|||||||+||++++++|.++|++|+++.|+.++..+ ..+..++++.+|++|++++.++++ .+
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 393 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVP 393 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 35689999999999999999999999999999998754321 124568899999999999988875 47
Q ss_pred cEEEEcC-------------h-----------hH------HHHHHHhCCC-CeEEEEcccceec
Q 029118 165 RSIICPS-------------E-----------GF------ISNAGSLKGV-QHVILLSQGAVVC 197 (198)
Q Consensus 165 DaVIh~a-------------~-----------G~------lldAA~~~GV-kRiV~vSS~~Vy~ 197 (198)
|.|||++ + |. ++..+++.+- .|||++||.+.|.
T Consensus 394 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~ 457 (582)
T PRK05855 394 DIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYA 457 (582)
T ss_pred cEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhcc
Confidence 9999972 0 11 2223344443 6999999987664
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=8.7e-10 Score=91.21 Aligned_cols=73 Identities=14% Similarity=0.317 Sum_probs=58.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCC-cccc---cccCCceEEEEccCCCHHHHHHhhcC--------cc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAM---ESFGTYVESMAGDASNKKFLKTALRG--------VR 165 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~-~~a~---~~~g~~vevV~GDl~D~~sL~~AL~G--------vD 165 (198)
.++++|||||+|+||+++++.|+++|++|.++.|+. .... ...+..+.++.+|++|++++.++++. +|
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id 83 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPIT 83 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCe
Confidence 346899999999999999999999999998876643 2221 11234688999999999999888753 89
Q ss_pred EEEEc
Q 029118 166 SIICP 170 (198)
Q Consensus 166 aVIh~ 170 (198)
+|||+
T Consensus 84 ~li~~ 88 (253)
T PRK08642 84 TVVNN 88 (253)
T ss_pred EEEEC
Confidence 99986
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=9.5e-10 Score=91.49 Aligned_cols=100 Identities=11% Similarity=0.076 Sum_probs=72.5
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-------cCCceEEEEccCC--CHHHHHHh------
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDAS--NKKFLKTA------ 160 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-------~g~~vevV~GDl~--D~~sL~~A------ 160 (198)
-.+.+++|||||+|+||.+++++|+++|++|.+++|++++.... ....++++.+|++ +.+.+.++
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 88 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE 88 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence 44677999999999999999999999999999999987543211 1235678888886 55544443
Q ss_pred -hcCccEEEEcC--------------h-----------hH--HHH----HHHhCCCCeEEEEcccce
Q 029118 161 -LRGVRSIICPS--------------E-----------GF--ISN----AGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 161 -L~GvDaVIh~a--------------~-----------G~--lld----AA~~~GVkRiV~vSS~~V 195 (198)
+..+|.|||++ . ++ +++ .+++.+.++||++||...
T Consensus 89 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~ 155 (247)
T PRK08945 89 QFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVG 155 (247)
T ss_pred HhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhh
Confidence 34689999972 0 11 233 335678899999999643
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.2e-09 Score=94.71 Aligned_cols=102 Identities=15% Similarity=0.194 Sum_probs=75.0
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc--c------cccCCceEEEEccCCCHHHHHHhhc-----
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA--M------ESFGTYVESMAGDASNKKFLKTALR----- 162 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a--~------~~~g~~vevV~GDl~D~~sL~~AL~----- 162 (198)
...++++|||||+|+||++++++|+++|++|.+..|+.+.. . ...+..+.++.+|++|+++++++++
T Consensus 52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 131 (300)
T PRK06128 52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKE 131 (300)
T ss_pred ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence 34567999999999999999999999999998877654321 1 1124567889999999999887764
Q ss_pred --CccEEEEcC--------------h-----------hH--HHHHHHhC--CCCeEEEEcccceec
Q 029118 163 --GVRSIICPS--------------E-----------GF--ISNAGSLK--GVQHVILLSQGAVVC 197 (198)
Q Consensus 163 --GvDaVIh~a--------------~-----------G~--lldAA~~~--GVkRiV~vSS~~Vy~ 197 (198)
++|.|||++ + ++ +++++... .-.+||++||...|.
T Consensus 132 ~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~ 197 (300)
T PRK06128 132 LGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQ 197 (300)
T ss_pred hCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccC
Confidence 689999972 0 11 44555421 225999999987764
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=6.1e-10 Score=97.68 Aligned_cols=76 Identities=13% Similarity=0.126 Sum_probs=62.5
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-------c-CCceEEEEccCCCHHHHHHhhc----
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------F-GTYVESMAGDASNKKFLKTALR---- 162 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-------~-g~~vevV~GDl~D~~sL~~AL~---- 162 (198)
.+..+++++|||||++||.+++++|+++|++|.++.|+.++..+. . +..++++.+|+.|+++++++++
T Consensus 10 ~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~ 89 (313)
T PRK05854 10 PDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRA 89 (313)
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 345678999999999999999999999999999999987643211 1 2358899999999999987764
Q ss_pred ---CccEEEEc
Q 029118 163 ---GVRSIICP 170 (198)
Q Consensus 163 ---GvDaVIh~ 170 (198)
.+|.+||.
T Consensus 90 ~~~~iD~li~n 100 (313)
T PRK05854 90 EGRPIHLLINN 100 (313)
T ss_pred hCCCccEEEEC
Confidence 47999987
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=6.2e-10 Score=93.21 Aligned_cols=74 Identities=14% Similarity=0.065 Sum_probs=59.8
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-cCCceEEEEccCCCHHHHHHhhc-------CccEEE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-FGTYVESMAGDASNKKFLKTALR-------GVRSII 168 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-~g~~vevV~GDl~D~~sL~~AL~-------GvDaVI 168 (198)
..+++||||||+|+||.+++++|+++|++|.++.|++...... .....+++++|++|++.+.++++ .+|.||
T Consensus 5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi 84 (255)
T PRK06057 5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAF 84 (255)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 3467899999999999999999999999999999987543211 01123688999999999988886 569999
Q ss_pred Ec
Q 029118 169 CP 170 (198)
Q Consensus 169 h~ 170 (198)
|+
T Consensus 85 ~~ 86 (255)
T PRK06057 85 NN 86 (255)
T ss_pred EC
Confidence 97
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=8.2e-10 Score=92.90 Aligned_cols=73 Identities=19% Similarity=0.330 Sum_probs=61.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc---ccCCceEEEEccCCCHHHHHHhhc-------CccEE
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~---~~g~~vevV~GDl~D~~sL~~AL~-------GvDaV 167 (198)
.++++|||||+|+||++++++|+++|++|.++.|++++... ..+..+.++++|++|+++++++++ .+|.+
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 84 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCF 84 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 46789999999999999999999999999999998755432 234458899999999999888764 57999
Q ss_pred EEc
Q 029118 168 ICP 170 (198)
Q Consensus 168 Ih~ 170 (198)
||+
T Consensus 85 i~~ 87 (263)
T PRK06200 85 VGN 87 (263)
T ss_pred EEC
Confidence 987
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=1e-09 Score=91.82 Aligned_cols=74 Identities=18% Similarity=0.279 Sum_probs=61.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
..++++|||||+|.||++++++|+++|++|.++.|+.++.... .+..+..+.+|++|++++.++++ .
T Consensus 7 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 86 (253)
T PRK05867 7 LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGG 86 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 3467899999999999999999999999999999987543211 23457889999999999988774 7
Q ss_pred ccEEEEc
Q 029118 164 VRSIICP 170 (198)
Q Consensus 164 vDaVIh~ 170 (198)
+|.+||+
T Consensus 87 id~lv~~ 93 (253)
T PRK05867 87 IDIAVCN 93 (253)
T ss_pred CCEEEEC
Confidence 8999997
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.08 E-value=1e-09 Score=97.96 Aligned_cols=99 Identities=16% Similarity=0.170 Sum_probs=77.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhh-------cCc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTAL-------RGV 164 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL-------~Gv 164 (198)
..+++|||||||.||++++++|+++|++|.++.|++++..+ ..+..+.++..|++|++++++++ .++
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 85 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRI 85 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 45789999999999999999999999999999998765421 12456788999999999999887 467
Q ss_pred cEEEEcC-------------h-----------hH------HHHHHHhCCCCeEEEEccccee
Q 029118 165 RSIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 165 DaVIh~a-------------~-----------G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
|.+||++ + +. ++...++.+-.+||++||.+.+
T Consensus 86 D~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~ 147 (330)
T PRK06139 86 DVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGF 147 (330)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhc
Confidence 9999972 0 11 2333455667899999997654
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=4.2e-10 Score=92.47 Aligned_cols=72 Identities=13% Similarity=0.138 Sum_probs=59.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc-c-------cccCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-M-------ESFGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a-~-------~~~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
.++||||||+|+||++++++|+++|++|.++.|+.... . ...+..++++.+|++|.+++.++++ +
T Consensus 6 ~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 85 (249)
T PRK09135 6 AKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFGR 85 (249)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 46899999999999999999999999999999864321 1 1112358899999999999998886 4
Q ss_pred ccEEEEc
Q 029118 164 VRSIICP 170 (198)
Q Consensus 164 vDaVIh~ 170 (198)
+|.|||+
T Consensus 86 ~d~vi~~ 92 (249)
T PRK09135 86 LDALVNN 92 (249)
T ss_pred CCEEEEC
Confidence 7999998
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.1e-09 Score=91.62 Aligned_cols=99 Identities=12% Similarity=0.163 Sum_probs=75.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
..+++||||||+|+||++++++|.++|++|.++.|+...... ..+.++.++..|++|.+++.++++ .
T Consensus 9 l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 88 (255)
T PRK06113 9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGK 88 (255)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 457899999999999999999999999999999987654321 123457889999999999887764 5
Q ss_pred ccEEEEcC------------h-----------hH--HHHHH----HhCCCCeEEEEcccce
Q 029118 164 VRSIICPS------------E-----------GF--ISNAG----SLKGVQHVILLSQGAV 195 (198)
Q Consensus 164 vDaVIh~a------------~-----------G~--lldAA----~~~GVkRiV~vSS~~V 195 (198)
+|+|||++ . +. +++++ .+.+..+||++||.+.
T Consensus 89 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~ 149 (255)
T PRK06113 89 VDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAA 149 (255)
T ss_pred CCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccc
Confidence 69999972 0 11 33443 3455679999999654
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.5e-09 Score=91.51 Aligned_cols=74 Identities=14% Similarity=0.192 Sum_probs=60.8
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc-c---cccCCceEEEEccCCCHHHHHHhhc-------Ccc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-M---ESFGTYVESMAGDASNKKFLKTALR-------GVR 165 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a-~---~~~g~~vevV~GDl~D~~sL~~AL~-------GvD 165 (198)
..++++|||||++.||+.++++|+++|++|.++.|+.... . ...+.++.++.+|++|++++.++++ .+|
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD 85 (251)
T PRK12481 6 LNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHID 85 (251)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4568999999999999999999999999999988864321 1 1234568899999999999988875 579
Q ss_pred EEEEc
Q 029118 166 SIICP 170 (198)
Q Consensus 166 aVIh~ 170 (198)
.+||+
T Consensus 86 ~lv~~ 90 (251)
T PRK12481 86 ILINN 90 (251)
T ss_pred EEEEC
Confidence 99997
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=3e-09 Score=92.41 Aligned_cols=74 Identities=23% Similarity=0.317 Sum_probs=58.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc--cc------cccCCceEEEEccCCCHHHHHHhhc------
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--AM------ESFGTYVESMAGDASNKKFLKTALR------ 162 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~--a~------~~~g~~vevV~GDl~D~~sL~~AL~------ 162 (198)
...+++|||||+|+||++++++|+++|++|.+..|+... .. ...+..+.++.+|++|++++.++++
T Consensus 47 ~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 126 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKAL 126 (294)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 455789999999999999999999999999988765421 11 1123457789999999998877653
Q ss_pred -CccEEEEc
Q 029118 163 -GVRSIICP 170 (198)
Q Consensus 163 -GvDaVIh~ 170 (198)
++|++||.
T Consensus 127 g~id~lv~~ 135 (294)
T PRK07985 127 GGLDIMALV 135 (294)
T ss_pred CCCCEEEEC
Confidence 57999986
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.6e-09 Score=91.29 Aligned_cols=73 Identities=25% Similarity=0.347 Sum_probs=61.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc---cCCceEEEEccCCCHHHHHHhhc-------CccEE
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~---~g~~vevV~GDl~D~~sL~~AL~-------GvDaV 167 (198)
.+++++||||||+||++++++|+++|++|.++.|+.+...+. .+..+.++.+|++|.+++.++++ .+|.+
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 83 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCL 83 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 467999999999999999999999999999999987543322 23458889999999998887774 57999
Q ss_pred EEc
Q 029118 168 ICP 170 (198)
Q Consensus 168 Ih~ 170 (198)
||+
T Consensus 84 i~~ 86 (262)
T TIGR03325 84 IPN 86 (262)
T ss_pred EEC
Confidence 987
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=7.8e-10 Score=90.92 Aligned_cols=73 Identities=8% Similarity=0.166 Sum_probs=60.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc---c--CCceEEEEccCCCHHHHHHhhc-------Ccc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F--GTYVESMAGDASNKKFLKTALR-------GVR 165 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~---~--g~~vevV~GDl~D~~sL~~AL~-------GvD 165 (198)
.+++||||||+|+||+++++.|+++|++|.+++|++++.... . ..+++++++|++|++.+.++++ ++|
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 83 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAID 83 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 457999999999999999999999999999999987644221 1 1258899999999999987764 458
Q ss_pred EEEEc
Q 029118 166 SIICP 170 (198)
Q Consensus 166 aVIh~ 170 (198)
.+||+
T Consensus 84 ~ii~~ 88 (238)
T PRK05786 84 GLVVT 88 (238)
T ss_pred EEEEc
Confidence 89887
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.4e-09 Score=91.41 Aligned_cols=71 Identities=25% Similarity=0.315 Sum_probs=58.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc---c--CCceEEEEccCCCHHHHHHhhc-------CccEE
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F--GTYVESMAGDASNKKFLKTALR-------GVRSI 167 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~---~--g~~vevV~GDl~D~~sL~~AL~-------GvDaV 167 (198)
|++|||||+|.||+.++++|+++|++|.++.|+++..... . ...+.++.+|++|+++++++++ ++|.|
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l 80 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL 80 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 4799999999999999999999999999999987543211 1 1257889999999999988774 68999
Q ss_pred EEc
Q 029118 168 ICP 170 (198)
Q Consensus 168 Ih~ 170 (198)
||+
T Consensus 81 i~n 83 (259)
T PRK08340 81 VWN 83 (259)
T ss_pred EEC
Confidence 986
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.04 E-value=6.3e-10 Score=99.41 Aligned_cols=89 Identities=18% Similarity=0.169 Sum_probs=68.6
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc-CccEEEEcC---------
Q 029118 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-GVRSIICPS--------- 171 (198)
Q Consensus 102 ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~-GvDaVIh~a--------- 171 (198)
|+|||||||||++++.+|...||+|.+++|++.+....++.+++.. +.+.++.. +||+||+.+
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~~~v~~~-------~~~~~~~~~~~DavINLAG~~I~~rrW 73 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLHPNVTLW-------EGLADALTLGIDAVINLAGEPIAERRW 73 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcCcccccc-------chhhhcccCCCCEEEECCCCccccccC
Confidence 6899999999999999999999999999999988776666555422 34455665 899999972
Q ss_pred -------------hhH--HHHHHH--hCCCCeEEEEcccceec
Q 029118 172 -------------EGF--ISNAGS--LKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 -------------~G~--lldAA~--~~GVkRiV~vSS~~Vy~ 197 (198)
..| +.++.. +..++-+|--|.++.|+
T Consensus 74 t~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG 116 (297)
T COG1090 74 TEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYG 116 (297)
T ss_pred CHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEec
Confidence 112 455543 66788888888888886
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.8e-09 Score=89.20 Aligned_cols=72 Identities=17% Similarity=0.249 Sum_probs=58.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-cCCceEEEEccCCCHHHHHHhhc-------CccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-FGTYVESMAGDASNKKFLKTALR-------GVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-~g~~vevV~GDl~D~~sL~~AL~-------GvDaVIh~ 170 (198)
.+++|||||+|.||++++++|+++|++|.++.|++++.... ...+++++.+|++|++++.++++ ++|.+||+
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ 81 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHN 81 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEEC
Confidence 46899999999999999999999999999999987543221 11247889999999999877653 47999997
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=2.3e-09 Score=89.61 Aligned_cols=72 Identities=17% Similarity=0.255 Sum_probs=60.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cCCceEEEEccCCCHHHHHHhhc-------Ccc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GVR 165 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~AL~-------GvD 165 (198)
++++|||||+|.||++++++|+++|++|.++.|++...... .+..+.++.+|++|++.+.++++ .+|
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID 80 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence 36899999999999999999999999999999987543211 23468899999999999988764 579
Q ss_pred EEEEc
Q 029118 166 SIICP 170 (198)
Q Consensus 166 aVIh~ 170 (198)
.|||+
T Consensus 81 ~lI~~ 85 (252)
T PRK07677 81 ALINN 85 (252)
T ss_pred EEEEC
Confidence 99987
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.4e-09 Score=105.43 Aligned_cols=99 Identities=18% Similarity=0.301 Sum_probs=77.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc---cC--CceEEEEccCCCHHHHHHhhc-------Ccc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG--TYVESMAGDASNKKFLKTALR-------GVR 165 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~---~g--~~vevV~GDl~D~~sL~~AL~-------GvD 165 (198)
.++++|||||+|+||++++++|+++|++|+++.|+++..... ++ ..+.++.+|++|++++.++++ ++|
T Consensus 421 ~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iD 500 (681)
T PRK08324 421 AGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVD 500 (681)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 467999999999999999999999999999999987654221 22 268899999999999988875 789
Q ss_pred EEEEcCh------------------------hH--HH----HHHHhCCC-CeEEEEccccee
Q 029118 166 SIICPSE------------------------GF--IS----NAGSLKGV-QHVILLSQGAVV 196 (198)
Q Consensus 166 aVIh~a~------------------------G~--ll----dAA~~~GV-kRiV~vSS~~Vy 196 (198)
.|||++. +. ++ +..++.+. .+||++||..++
T Consensus 501 vvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~ 562 (681)
T PRK08324 501 IVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAV 562 (681)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCcccc
Confidence 9999820 11 33 33455665 799999997553
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=4.9e-09 Score=89.54 Aligned_cols=73 Identities=16% Similarity=0.247 Sum_probs=60.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc-------------cccCCceEEEEccCCCHHHHHHhhc--
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------------ESFGTYVESMAGDASNKKFLKTALR-- 162 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~-------------~~~g~~vevV~GDl~D~~sL~~AL~-- 162 (198)
.++++|||||+|+||++++++|+++|++|.++.|+.++.. ...+.++.++.+|++|++.+.++++
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~ 84 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKA 84 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence 4578999999999999999999999999999999764311 0123457889999999999988775
Q ss_pred -----CccEEEEc
Q 029118 163 -----GVRSIICP 170 (198)
Q Consensus 163 -----GvDaVIh~ 170 (198)
.+|.|||+
T Consensus 85 ~~~~g~id~li~~ 97 (273)
T PRK08278 85 VERFGGIDICVNN 97 (273)
T ss_pred HHHhCCCCEEEEC
Confidence 67999997
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=2.1e-09 Score=88.92 Aligned_cols=72 Identities=13% Similarity=0.144 Sum_probs=57.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeC-Ccccc------cccCCceEEEEccCCCHHHHHHhhc-------Cc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-KRNAM------ESFGTYVESMAGDASNKKFLKTALR-------GV 164 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~-~~~a~------~~~g~~vevV~GDl~D~~sL~~AL~-------Gv 164 (198)
++++|||||||+||++++++|+++|++|....|+ ++... ...+..+.++.+|++|++++.++++ .+
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL 81 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 3579999999999999999999999998877643 32211 1123457889999999999998886 67
Q ss_pred cEEEEc
Q 029118 165 RSIICP 170 (198)
Q Consensus 165 DaVIh~ 170 (198)
|.|||+
T Consensus 82 d~li~~ 87 (248)
T PRK06123 82 DALVNN 87 (248)
T ss_pred CEEEEC
Confidence 999997
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.01 E-value=2.9e-09 Score=89.19 Aligned_cols=100 Identities=24% Similarity=0.201 Sum_probs=72.9
Q ss_pred CCCeEEEEcCCC--hHHHHHHHHHHHCCCcEEEEEeCCcc-----------c------ccccCCceEEEEccCCCHHHHH
Q 029118 98 ARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKRN-----------A------MESFGTYVESMAGDASNKKFLK 158 (198)
Q Consensus 98 ~~~~ILVTGATG--fIG~~Vvr~Ll~~G~~VralvR~~~~-----------a------~~~~g~~vevV~GDl~D~~sL~ 158 (198)
.+++|||||||| .||.+++++|+++|++|.++.|++.+ . ....+..++++..|++|++++.
T Consensus 4 ~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 83 (256)
T PRK12748 4 MKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAPN 83 (256)
T ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence 457899999996 69999999999999999999987211 0 0112346899999999999987
Q ss_pred Hhhc-------CccEEEEcC-------------h-----------hH--HHHHHH----hCCCCeEEEEcccceec
Q 029118 159 TALR-------GVRSIICPS-------------E-----------GF--ISNAGS----LKGVQHVILLSQGAVVC 197 (198)
Q Consensus 159 ~AL~-------GvDaVIh~a-------------~-----------G~--lldAA~----~~GVkRiV~vSS~~Vy~ 197 (198)
.+++ .+|+|||++ . ++ +++++. ..+-.+||++||...+.
T Consensus 84 ~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~ 159 (256)
T PRK12748 84 RVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLG 159 (256)
T ss_pred HHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccC
Confidence 7764 479999972 0 11 333432 33567999999976643
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=2.8e-09 Score=88.33 Aligned_cols=72 Identities=19% Similarity=0.238 Sum_probs=57.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEe-CCccccc------ccCCceEEEEccCCCHHHHHHhhc-------Cc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK-DKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GV 164 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR-~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~-------Gv 164 (198)
+++||||||+|+||+.++++|+++|++|.++++ +++.... ..+.++.++.+|++|++++.++++ .+
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRL 81 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence 358999999999999999999999999987764 4333211 123468899999999999887664 68
Q ss_pred cEEEEc
Q 029118 165 RSIICP 170 (198)
Q Consensus 165 DaVIh~ 170 (198)
|.|||+
T Consensus 82 d~li~~ 87 (248)
T PRK06947 82 DALVNN 87 (248)
T ss_pred CEEEEC
Confidence 999987
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=6.3e-09 Score=87.42 Aligned_cols=74 Identities=11% Similarity=0.214 Sum_probs=59.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc-c------cccCCceEEEEccCCCHHHHHHhhc-------
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-M------ESFGTYVESMAGDASNKKFLKTALR------- 162 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a-~------~~~g~~vevV~GDl~D~~sL~~AL~------- 162 (198)
...+++|||||+|.||++++++|+++|++|.++.|+.... . ...+..+.++..|++|.+++.++++
T Consensus 5 ~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g 84 (261)
T PRK08936 5 LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFG 84 (261)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4567999999999999999999999999999888854321 1 1123457789999999999887764
Q ss_pred CccEEEEc
Q 029118 163 GVRSIICP 170 (198)
Q Consensus 163 GvDaVIh~ 170 (198)
.+|++||+
T Consensus 85 ~id~lv~~ 92 (261)
T PRK08936 85 TLDVMINN 92 (261)
T ss_pred CCCEEEEC
Confidence 57999997
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=4.1e-09 Score=88.88 Aligned_cols=74 Identities=12% Similarity=0.225 Sum_probs=58.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCC-cccc-------cccCCceEEEEccCCCHHHHHHhhc------
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAM-------ESFGTYVESMAGDASNKKFLKTALR------ 162 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~-~~a~-------~~~g~~vevV~GDl~D~~sL~~AL~------ 162 (198)
..++++|||||++.||++++++|+++|++|.++.|+. +... ...+..+.++..|++|+++++++++
T Consensus 6 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 85 (260)
T PRK08416 6 MKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDF 85 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 4567999999999999999999999999998876543 2221 1124468899999999999988775
Q ss_pred -CccEEEEc
Q 029118 163 -GVRSIICP 170 (198)
Q Consensus 163 -GvDaVIh~ 170 (198)
.+|.+||+
T Consensus 86 g~id~lv~n 94 (260)
T PRK08416 86 DRVDFFISN 94 (260)
T ss_pred CCccEEEEC
Confidence 47999986
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.99 E-value=5.6e-09 Score=87.70 Aligned_cols=74 Identities=16% Similarity=0.165 Sum_probs=59.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc--c--cccCCceEEEEccCCCHHHHHHhhc-------Ccc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA--M--ESFGTYVESMAGDASNKKFLKTALR-------GVR 165 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a--~--~~~g~~vevV~GDl~D~~sL~~AL~-------GvD 165 (198)
..++++|||||+|.||++++++|.++|++|.++.|+.... . ...+..+.+++.|++|.+++.++++ .+|
T Consensus 8 l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D 87 (253)
T PRK08993 8 LEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHID 87 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4567999999999999999999999999999887654211 1 1124467889999999999988875 579
Q ss_pred EEEEc
Q 029118 166 SIICP 170 (198)
Q Consensus 166 aVIh~ 170 (198)
.+||+
T Consensus 88 ~li~~ 92 (253)
T PRK08993 88 ILVNN 92 (253)
T ss_pred EEEEC
Confidence 99997
|
|
| >KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.99 E-value=2.1e-09 Score=91.76 Aligned_cols=101 Identities=17% Similarity=0.205 Sum_probs=82.5
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCC--cEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc-C
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-S 171 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~--~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~-a 171 (198)
..-.++..+|.||||..|+-+++++++++. +|.++.|..-. ....+..+..+.-|+..-+.+..+.+|.|..||+ .
T Consensus 14 f~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~-d~at~k~v~q~~vDf~Kl~~~a~~~qg~dV~FcaLg 92 (238)
T KOG4039|consen 14 FRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELP-DPATDKVVAQVEVDFSKLSQLATNEQGPDVLFCALG 92 (238)
T ss_pred HhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCC-CccccceeeeEEechHHHHHHHhhhcCCceEEEeec
Confidence 344567899999999999999999999884 89999987422 1223456778889999999999999999999998 1
Q ss_pred --------hhH----------HHHHHHhCCCCeEEEEccccee
Q 029118 172 --------EGF----------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 172 --------~G~----------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
+|+ ..++|++.|+++||++||.++.
T Consensus 93 TTRgkaGadgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GAd 135 (238)
T KOG4039|consen 93 TTRGKAGADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGAD 135 (238)
T ss_pred ccccccccCceEeechHHHHHHHHHHHhCCCeEEEEEeccCCC
Confidence 222 5788899999999999999875
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=4.2e-09 Score=91.25 Aligned_cols=74 Identities=16% Similarity=0.274 Sum_probs=60.0
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc---ccC--CceEEEEccCCCHHHHHHhhc-------Cc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFG--TYVESMAGDASNKKFLKTALR-------GV 164 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~---~~g--~~vevV~GDl~D~~sL~~AL~-------Gv 164 (198)
..++++|||||+|.||++++++|.++|++|.++.|+++.... ..+ ..+..+.+|++|++++.++++ .+
T Consensus 7 l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 86 (296)
T PRK05872 7 LAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGI 86 (296)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 456799999999999999999999999999999998765321 122 235566799999999888764 57
Q ss_pred cEEEEc
Q 029118 165 RSIICP 170 (198)
Q Consensus 165 DaVIh~ 170 (198)
|.|||+
T Consensus 87 d~vI~n 92 (296)
T PRK05872 87 DVVVAN 92 (296)
T ss_pred CEEEEC
Confidence 999997
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.98 E-value=4.5e-09 Score=92.99 Aligned_cols=100 Identities=16% Similarity=0.175 Sum_probs=80.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-------cCCceEEEEccCCCHHHHHHhhc-------
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR------- 162 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-------~g~~vevV~GDl~D~~sL~~AL~------- 162 (198)
..++++||||||+.||..++++|.++|++|..+.|+.++..++ .+-.++++..|++|++.+.+..+
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~ 83 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGG 83 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence 4577899999999999999999999999999999998864322 23457899999999999888763
Q ss_pred CccEEEEcC----h------------h--------------HHHHHHHhCCCCeEEEEccccee
Q 029118 163 GVRSIICPS----E------------G--------------FISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 163 GvDaVIh~a----~------------G--------------~lldAA~~~GVkRiV~vSS~~Vy 196 (198)
.+|.+|+++ . . .++.-+.++|-.+||.++|.+.+
T Consensus 84 ~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~ 147 (265)
T COG0300 84 PIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGL 147 (265)
T ss_pred cccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhc
Confidence 589999872 0 0 04455677888899999998654
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=3.3e-09 Score=87.17 Aligned_cols=73 Identities=14% Similarity=0.241 Sum_probs=57.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCC-cccccc-cCCceEEEEccCCCHHHHHHhhc---CccEEEEc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAMES-FGTYVESMAGDASNKKFLKTALR---GVRSIICP 170 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~-~~a~~~-~g~~vevV~GDl~D~~sL~~AL~---GvDaVIh~ 170 (198)
.+++||||||+|.||++++++|+++|++|.++.|+. +...+. ...+++++.+|++|.+.+.++++ .+|.+||+
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~ 82 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVN 82 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEEC
Confidence 467899999999999999999999999998887643 322211 11236788999999998888774 47999997
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=98.97 E-value=3.8e-09 Score=87.09 Aligned_cols=69 Identities=20% Similarity=0.223 Sum_probs=55.4
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc-cc------cccCCceEEEEccCCCHHHHHHhhc-------CccEE
Q 029118 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AM------ESFGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (198)
Q Consensus 102 ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~-a~------~~~g~~vevV~GDl~D~~sL~~AL~-------GvDaV 167 (198)
||||||+|+||.+++++|+++|++|.++.|.... .. ...+.++.++.+|++|++++.++++ ..|.+
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l 80 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV 80 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 6899999999999999999999999998875422 11 1124568899999999999888764 45888
Q ss_pred EEc
Q 029118 168 ICP 170 (198)
Q Consensus 168 Ih~ 170 (198)
||.
T Consensus 81 i~~ 83 (239)
T TIGR01831 81 VLN 83 (239)
T ss_pred EEC
Confidence 886
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=4.3e-09 Score=89.31 Aligned_cols=71 Identities=18% Similarity=0.193 Sum_probs=56.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cCC-ceEEEEccCCCHHHHHHhhc-------Ccc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGT-YVESMAGDASNKKFLKTALR-------GVR 165 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g~-~vevV~GDl~D~~sL~~AL~-------GvD 165 (198)
++++||||||+||++++++|+++|++|.++.|++++.... .+. .+.++.+|++|++++.++++ ++|
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD 80 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 4799999999999999999999999999999987543211 122 24567899999998876664 579
Q ss_pred EEEEc
Q 029118 166 SIICP 170 (198)
Q Consensus 166 aVIh~ 170 (198)
+|||+
T Consensus 81 ~lv~~ 85 (272)
T PRK07832 81 VVMNI 85 (272)
T ss_pred EEEEC
Confidence 99997
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=98.96 E-value=7.4e-09 Score=90.89 Aligned_cols=72 Identities=15% Similarity=0.206 Sum_probs=59.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC-CcEEEEEeCCcccccc------cCCceEEEEccCCCHHHHHHhh-------cCc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTAL-------RGV 164 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G-~~VralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~AL-------~Gv 164 (198)
++++||||||+.||.+++++|+++| ++|.++.|+.++..+. .+..++++.+|++|++++++++ .++
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 82 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL 82 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 5689999999999999999999999 9999999987543211 1245788999999999988776 358
Q ss_pred cEEEEc
Q 029118 165 RSIICP 170 (198)
Q Consensus 165 DaVIh~ 170 (198)
|.+||.
T Consensus 83 D~lI~n 88 (314)
T TIGR01289 83 DALVCN 88 (314)
T ss_pred CEEEEC
Confidence 999986
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=6.8e-09 Score=86.59 Aligned_cols=72 Identities=18% Similarity=0.150 Sum_probs=55.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEE-eCCccccc------ccCCceEEEEccCCCHHHHHHhhc---------
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALV-KDKRNAME------SFGTYVESMAGDASNKKFLKTALR--------- 162 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~Vralv-R~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~--------- 162 (198)
++++|||||+|+||++++++|.++|++|.+.. |+.+.... ..+..+..+..|++|.+.+..+++
T Consensus 4 ~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 83 (252)
T PRK12747 4 GKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNR 83 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhhh
Confidence 57899999999999999999999999998875 33332211 113446788999999887765432
Q ss_pred ----CccEEEEc
Q 029118 163 ----GVRSIICP 170 (198)
Q Consensus 163 ----GvDaVIh~ 170 (198)
++|.|||+
T Consensus 84 ~g~~~id~lv~~ 95 (252)
T PRK12747 84 TGSTKFDILINN 95 (252)
T ss_pred cCCCCCCEEEEC
Confidence 68999997
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=6.6e-09 Score=85.56 Aligned_cols=74 Identities=15% Similarity=0.288 Sum_probs=60.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
..++++|||||+|+||+++++.|+++|++|.++.|++.+... ..+..+.++..|++|++++.++++ +
T Consensus 3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (253)
T PRK08217 3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQ 82 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 346789999999999999999999999999999988754221 124567889999999998877664 3
Q ss_pred ccEEEEc
Q 029118 164 VRSIICP 170 (198)
Q Consensus 164 vDaVIh~ 170 (198)
+|+|||+
T Consensus 83 id~vi~~ 89 (253)
T PRK08217 83 LNGLINN 89 (253)
T ss_pred CCEEEEC
Confidence 6999987
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=8.9e-09 Score=84.87 Aligned_cols=69 Identities=16% Similarity=0.235 Sum_probs=53.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC--CcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHh---hcCccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA---LRGVRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G--~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~A---L~GvDaVIh~ 170 (198)
|+++||||+|+||++++++|+++| +.|.+..|+... ......+.++++|++|+++++++ +.++|+|||+
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~--~~~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li~~ 74 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKP--DFQHDNVQWHALDVTDEAEIKQLSEQFTQLDWLINC 74 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCcc--ccccCceEEEEecCCCHHHHHHHHHhcCCCCEEEEC
Confidence 479999999999999999999986 455555555433 22235688999999999987664 4588999987
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.94 E-value=3e-09 Score=87.74 Aligned_cols=72 Identities=13% Similarity=0.119 Sum_probs=60.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccccc-CCceEEEEccCCCHHHHHHhhc-----CccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTALR-----GVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~-g~~vevV~GDl~D~~sL~~AL~-----GvDaVIh~ 170 (198)
+++++||||+|++|++++++|+++|++|.++.|++.+..... ..++.++.+|++|+++++++++ ++|+|||+
T Consensus 1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ 78 (225)
T PRK08177 1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVN 78 (225)
T ss_pred CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEc
Confidence 367999999999999999999999999999999886542211 1357888999999998888775 58999987
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=1.1e-08 Score=85.92 Aligned_cols=73 Identities=16% Similarity=0.174 Sum_probs=61.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-------cCCceEEEEccCCCHHHHHHhhc---CccEE
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR---GVRSI 167 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-------~g~~vevV~GDl~D~~sL~~AL~---GvDaV 167 (198)
..+++|||||+|.||++++++|+++|++|.++.|++++.... .+.++.++..|++|++++.++++ .+|.+
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~l 85 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDIL 85 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCEE
Confidence 457999999999999999999999999999999987643221 13457899999999999888764 58999
Q ss_pred EEc
Q 029118 168 ICP 170 (198)
Q Consensus 168 Ih~ 170 (198)
||+
T Consensus 86 v~~ 88 (259)
T PRK06125 86 VNN 88 (259)
T ss_pred EEC
Confidence 997
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=98.92 E-value=5.6e-09 Score=101.75 Aligned_cols=73 Identities=22% Similarity=0.301 Sum_probs=61.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-------cC-CceEEEEccCCCHHHHHHhhc-------
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FG-TYVESMAGDASNKKFLKTALR------- 162 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-------~g-~~vevV~GDl~D~~sL~~AL~------- 162 (198)
.++++|||||+|+||++++++|+++|++|+++.|+.+..... .+ ..+..+++|++|++++.++++
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g 492 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYG 492 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 457899999999999999999999999999999987543211 12 246789999999999998886
Q ss_pred CccEEEEc
Q 029118 163 GVRSIICP 170 (198)
Q Consensus 163 GvDaVIh~ 170 (198)
++|.|||+
T Consensus 493 ~iDilV~n 500 (676)
T TIGR02632 493 GVDIVVNN 500 (676)
T ss_pred CCcEEEEC
Confidence 78999998
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.4e-08 Score=89.12 Aligned_cols=98 Identities=15% Similarity=0.206 Sum_probs=78.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc---cC-CceEEEEccCCCHHHHHHhh-------cCcc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG-TYVESMAGDASNKKFLKTAL-------RGVR 165 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~---~g-~~vevV~GDl~D~~sL~~AL-------~GvD 165 (198)
...+.++|||||+.||..++++|.++|++|.+..|+.++..++ ++ ..+.++..|++|++++++++ ..+|
T Consensus 4 ~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iD 83 (246)
T COG4221 4 LKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRID 83 (246)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCccc
Confidence 3457899999999999999999999999999999998765432 33 35789999999999876665 4689
Q ss_pred EEEEcC------------------------hhH------HHHHHHhCCCCeEEEEcccc
Q 029118 166 SIICPS------------------------EGF------ISNAGSLKGVQHVILLSQGA 194 (198)
Q Consensus 166 aVIh~a------------------------~G~------lldAA~~~GVkRiV~vSS~~ 194 (198)
.+|+.+ .|. ++..+.+++-.+||.+||++
T Consensus 84 iLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiA 142 (246)
T COG4221 84 ILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIA 142 (246)
T ss_pred EEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEecccc
Confidence 999862 011 55667777777999999986
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=1.7e-08 Score=83.57 Aligned_cols=74 Identities=11% Similarity=0.087 Sum_probs=56.1
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-------cCCceEEEEccCCC--HHHHHHhh------
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASN--KKFLKTAL------ 161 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-------~g~~vevV~GDl~D--~~sL~~AL------ 161 (198)
..+++++||||+|+||++++++|+++|++|.++.|++++.... .+..+.++..|+.| .+.+.+++
T Consensus 4 l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~ 83 (239)
T PRK08703 4 LSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA 83 (239)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence 3457999999999999999999999999999999988643211 12346778899976 33444332
Q ss_pred --cCccEEEEc
Q 029118 162 --RGVRSIICP 170 (198)
Q Consensus 162 --~GvDaVIh~ 170 (198)
..+|.|||+
T Consensus 84 ~~~~id~vi~~ 94 (239)
T PRK08703 84 TQGKLDGIVHC 94 (239)
T ss_pred hCCCCCEEEEe
Confidence 467999987
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.3e-08 Score=94.05 Aligned_cols=75 Identities=20% Similarity=0.302 Sum_probs=62.6
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc---cccCCceEEEEccCCCHHHHHHhhc-------Ccc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALR-------GVR 165 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~---~~~g~~vevV~GDl~D~~sL~~AL~-------GvD 165 (198)
...++.+|||||+|.||++++++|+++|++|.++.|++++.. +..+..+..+.+|++|++++.++++ .+|
T Consensus 266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 345 (520)
T PRK06484 266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLD 345 (520)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 446789999999999999999999999999999999875432 2234557789999999999988774 479
Q ss_pred EEEEc
Q 029118 166 SIICP 170 (198)
Q Consensus 166 aVIh~ 170 (198)
.+||+
T Consensus 346 ~li~n 350 (520)
T PRK06484 346 VLVNN 350 (520)
T ss_pred EEEEC
Confidence 99996
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.89 E-value=2.1e-08 Score=84.26 Aligned_cols=73 Identities=19% Similarity=0.249 Sum_probs=59.7
Q ss_pred CCCeEEEEcCCC-hHHHHHHHHHHHCCCcEEEEEeCCcccccc-------cC-CceEEEEccCCCHHHHHHhhc------
Q 029118 98 ARDAVLVTDGDS-DIGQMVILSLIVKRTRIKALVKDKRNAMES-------FG-TYVESMAGDASNKKFLKTALR------ 162 (198)
Q Consensus 98 ~~~~ILVTGATG-fIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-------~g-~~vevV~GDl~D~~sL~~AL~------ 162 (198)
.++++|||||+| .||+++++.|+++|++|.+..|+.++.... .+ ..+.++++|++|++.+.++++
T Consensus 16 ~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 95 (262)
T PRK07831 16 AGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVERL 95 (262)
T ss_pred CCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 357899999998 699999999999999999998876543211 23 358899999999999988775
Q ss_pred -CccEEEEc
Q 029118 163 -GVRSIICP 170 (198)
Q Consensus 163 -GvDaVIh~ 170 (198)
.+|+|||+
T Consensus 96 g~id~li~~ 104 (262)
T PRK07831 96 GRLDVLVNN 104 (262)
T ss_pred CCCCEEEEC
Confidence 57999998
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.89 E-value=1.2e-08 Score=89.17 Aligned_cols=74 Identities=16% Similarity=0.210 Sum_probs=60.0
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCc-cccc------ccCCceEEEEccCCCHHHHHHhhc------C
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-NAME------SFGTYVESMAGDASNKKFLKTALR------G 163 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~-~a~~------~~g~~vevV~GDl~D~~sL~~AL~------G 163 (198)
..+++++||||+|+||++++++|+++|++|.+..|+.. .... ..+.++.++.+|++|++++.++++ .
T Consensus 10 l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~ 89 (306)
T PRK07792 10 LSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGG 89 (306)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCC
Confidence 45679999999999999999999999999999887532 2111 124568899999999999888774 5
Q ss_pred ccEEEEc
Q 029118 164 VRSIICP 170 (198)
Q Consensus 164 vDaVIh~ 170 (198)
+|.|||+
T Consensus 90 iD~li~n 96 (306)
T PRK07792 90 LDIVVNN 96 (306)
T ss_pred CCEEEEC
Confidence 7999997
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=9.3e-09 Score=87.86 Aligned_cols=75 Identities=13% Similarity=0.150 Sum_probs=61.3
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc-cccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~-a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+..+++++||||+|+||++++++|+++|++|.++.|++.. ...........+..|++|.+.+.+.+..+|.+||+
T Consensus 11 ~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~iDilVnn 86 (245)
T PRK12367 11 TWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDESPNEWIKWECGKEESLDKQLASLDVLILN 86 (245)
T ss_pred hhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHHhcCCCCEEEEC
Confidence 4456799999999999999999999999999999998622 21111112367899999999999999999999997
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.8e-08 Score=78.55 Aligned_cols=97 Identities=20% Similarity=0.260 Sum_probs=72.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC-CcEEEEEeC--Ccccc------cccCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKD--KRNAM------ESFGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G-~~VralvR~--~~~a~------~~~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
++++||||++.||+.++++|+++| +.|.++.|+ .+... ...+..+.+++.|++|+++++++++ .
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 479999999999999999999995 567777777 22211 1134678999999999999988873 6
Q ss_pred ccEEEEcC-------------h-----------h--HHHHHHHhCCCCeEEEEccccee
Q 029118 164 VRSIICPS-------------E-----------G--FISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 164 vDaVIh~a-------------~-----------G--~lldAA~~~GVkRiV~vSS~~Vy 196 (198)
+|.+||++ + + .+.+++..++-.+||++||....
T Consensus 81 ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~ 139 (167)
T PF00106_consen 81 LDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGV 139 (167)
T ss_dssp ESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGT
T ss_pred ccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhc
Confidence 69999872 0 0 03444444678999999997654
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.2e-08 Score=90.99 Aligned_cols=80 Identities=16% Similarity=0.239 Sum_probs=67.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCc--cEEEEcC------
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGV--RSIICPS------ 171 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~Gv--DaVIh~a------ 171 (198)
|+|||||++|++|.+|.++|. .+++|.++.|.. .|++|++.+.+.++.. |+|||++
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~---------------~Ditd~~~v~~~i~~~~PDvVIn~AAyt~vD 64 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-GEFEVIATDRAE---------------LDITDPDAVLEVIRETRPDVVINAAAYTAVD 64 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-CCceEEeccCcc---------------ccccChHHHHHHHHhhCCCEEEECccccccc
Confidence 459999999999999999987 779999998754 7899999999999865 9999982
Q ss_pred --------------hh--HHHHHHHhCCCCeEEEEccccee
Q 029118 172 --------------EG--FISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 172 --------------~G--~lldAA~~~GVkRiV~vSS~~Vy 196 (198)
.| .+.++|++.| -++||+||-.|+
T Consensus 65 ~aE~~~e~A~~vNa~~~~~lA~aa~~~g-a~lVhiSTDyVF 104 (281)
T COG1091 65 KAESEPELAFAVNATGAENLARAAAEVG-ARLVHISTDYVF 104 (281)
T ss_pred cccCCHHHHHHhHHHHHHHHHHHHHHhC-CeEEEeecceEe
Confidence 11 2788899888 579999997774
|
|
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=98.84 E-value=8.7e-09 Score=93.32 Aligned_cols=97 Identities=13% Similarity=0.092 Sum_probs=78.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc-ccc--ccC--CceEEEEccCCCHHHHHHhhcCccEEEEc--C
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AME--SFG--TYVESMAGDASNKKFLKTALRGVRSIICP--S 171 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~-a~~--~~g--~~vevV~GDl~D~~sL~~AL~GvDaVIh~--a 171 (198)
+-..-|.|||||+|+.|+.+|...|-+|.+--|..+. ... ..| ..+-+...|+.|+++++++++-...||+. .
T Consensus 61 GiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~sNVVINLIGr 140 (391)
T KOG2865|consen 61 GIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKHSNVVINLIGR 140 (391)
T ss_pred ceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHHhCcEEEEeecc
Confidence 3456789999999999999999999999999885432 211 122 24778899999999999999999999987 1
Q ss_pred --------------hhH--HHHHHHhCCCCeEEEEcccce
Q 029118 172 --------------EGF--ISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 172 --------------~G~--lldAA~~~GVkRiV~vSS~~V 195 (198)
.+. +...|+++||+|+|++|++++
T Consensus 141 d~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lga 180 (391)
T KOG2865|consen 141 DYETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGA 180 (391)
T ss_pred ccccCCcccccccchHHHHHHHHHHhhChhheeehhhccc
Confidence 111 778899999999999999874
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.84 E-value=2.8e-08 Score=91.84 Aligned_cols=74 Identities=16% Similarity=0.250 Sum_probs=61.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc---cccCCceEEEEccCCCHHHHHHhhc-------CccE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~---~~~g~~vevV~GDl~D~~sL~~AL~-------GvDa 166 (198)
..++++|||||++.||+.++++|+++|++|.++.|+.++.. ...+..+.++..|++|++++.++++ .+|.
T Consensus 3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~ 82 (520)
T PRK06484 3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDV 82 (520)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence 35679999999999999999999999999999999876542 2234567789999999999888774 4799
Q ss_pred EEEc
Q 029118 167 IICP 170 (198)
Q Consensus 167 VIh~ 170 (198)
+||+
T Consensus 83 li~n 86 (520)
T PRK06484 83 LVNN 86 (520)
T ss_pred EEEC
Confidence 9987
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=6.6e-09 Score=86.57 Aligned_cols=71 Identities=18% Similarity=0.247 Sum_probs=58.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccccc-CCceEEEEccCCCHHHHHHhhc----CccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTALR----GVRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~-g~~vevV~GDl~D~~sL~~AL~----GvDaVIh~ 170 (198)
++++||||+|.||++++++|.++|++|.++.|+.++..... ..+++++++|++|+++++++++ .+|.+||+
T Consensus 1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ 76 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNV 76 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEEC
Confidence 36999999999999999999999999999999876543221 1246789999999999988875 57999986
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=98.83 E-value=2.9e-08 Score=88.05 Aligned_cols=98 Identities=17% Similarity=0.231 Sum_probs=70.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-------c-CCceEEEEccCCC--HHH---HHHhhcCc-
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------F-GTYVESMAGDASN--KKF---LKTALRGV- 164 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-------~-g~~vevV~GDl~D--~~s---L~~AL~Gv- 164 (198)
++.++||||||.||++++++|.++|++|.++.|++++..+. . +..+..+..|+++ .+. +.+.+.+.
T Consensus 53 g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~d 132 (320)
T PLN02780 53 GSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGLD 132 (320)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCCC
Confidence 56899999999999999999999999999999998654211 1 1346778899985 333 34445554
Q ss_pred -cEEEEcC----h----------------------hH------HHHHHHhCCCCeEEEEccccee
Q 029118 165 -RSIICPS----E----------------------GF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 165 -DaVIh~a----~----------------------G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
|.+||.+ . +. ++..+++.+-.+||++||.+.+
T Consensus 133 idilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~ 197 (320)
T PLN02780 133 VGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAI 197 (320)
T ss_pred ccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhc
Confidence 4888751 0 11 3344556778899999997653
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=98.82 E-value=3.1e-08 Score=80.90 Aligned_cols=94 Identities=23% Similarity=0.304 Sum_probs=69.4
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCc-c-c-c------cccCCceEEEEccCCCHHHHHHhhcC-------
Q 029118 101 AVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR-N-A-M------ESFGTYVESMAGDASNKKFLKTALRG------- 163 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~-~-a-~------~~~g~~vevV~GDl~D~~sL~~AL~G------- 163 (198)
++||||++|.||..+++.|..++. +|.++.|++. . . . +..+..++++..|++|++++.++++.
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~ 81 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP 81 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence 689999999999999999999975 6888888832 1 1 1 12356799999999999999999854
Q ss_pred ccEEEEcC------------------------hhH--HHHHHHhCCCCeEEEEcccc
Q 029118 164 VRSIICPS------------------------EGF--ISNAGSLKGVQHVILLSQGA 194 (198)
Q Consensus 164 vDaVIh~a------------------------~G~--lldAA~~~GVkRiV~vSS~~ 194 (198)
++.|||++ .|. +.++.....++.||+.||++
T Consensus 82 i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis 138 (181)
T PF08659_consen 82 IDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSIS 138 (181)
T ss_dssp EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHH
T ss_pred cceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChh
Confidence 47899982 011 45666678999999999975
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=2.7e-08 Score=83.40 Aligned_cols=73 Identities=14% Similarity=0.217 Sum_probs=58.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc----cc------cccCCceEEEEccCCCHHHHHHhhc-----
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN----AM------ESFGTYVESMAGDASNKKFLKTALR----- 162 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~----a~------~~~g~~vevV~GDl~D~~sL~~AL~----- 162 (198)
.++++|||||+|+||++++++|+++|++|.++.++... .. ...+.+++++++|++|++++.++++
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 86 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAA 86 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHh
Confidence 45789999999999999999999999998888765421 11 1123468899999999999998875
Q ss_pred --CccEEEEc
Q 029118 163 --GVRSIICP 170 (198)
Q Consensus 163 --GvDaVIh~ 170 (198)
.+|.+||+
T Consensus 87 ~~~id~li~~ 96 (257)
T PRK12744 87 FGRPDIAINT 96 (257)
T ss_pred hCCCCEEEEC
Confidence 57999997
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.7e-08 Score=93.64 Aligned_cols=73 Identities=18% Similarity=0.218 Sum_probs=62.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccccc---CCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---GTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~---g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
.+++++||||||+||++++++|.++|++|.++.|++++..... ...++.+..|++|++.+.+.+.++|.+||+
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInn 252 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIIN 252 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEEC
Confidence 4678999999999999999999999999999999875432211 224678899999999999999999999986
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=3.3e-08 Score=90.35 Aligned_cols=74 Identities=15% Similarity=0.072 Sum_probs=58.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc--cccc-cCCceEEEEccCCCHHHHHHhhc-------CccE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--AMES-FGTYVESMAGDASNKKFLKTALR-------GVRS 166 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~--a~~~-~g~~vevV~GDl~D~~sL~~AL~-------GvDa 166 (198)
.+++++|||||+|.||.++++.|.++|++|.++.|+... .... ...+.+++..|++|++++.++++ ++|.
T Consensus 208 ~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~ 287 (450)
T PRK08261 208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDI 287 (450)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCE
Confidence 456799999999999999999999999999999885422 1111 01235688999999999887764 6899
Q ss_pred EEEc
Q 029118 167 IICP 170 (198)
Q Consensus 167 VIh~ 170 (198)
|||+
T Consensus 288 vi~~ 291 (450)
T PRK08261 288 VVHN 291 (450)
T ss_pred EEEC
Confidence 9997
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=98.80 E-value=3.4e-08 Score=86.21 Aligned_cols=93 Identities=12% Similarity=0.148 Sum_probs=70.4
Q ss_pred EEEcCCChHHHHHHHHHHHCC-CcEEEEEeCCcccccc------cCCceEEEEccCCCHHHHHHhhc-------CccEEE
Q 029118 103 LVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GVRSII 168 (198)
Q Consensus 103 LVTGATGfIG~~Vvr~Ll~~G-~~VralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~AL~-------GvDaVI 168 (198)
|||||++.||.+++++|+++| ++|.+..|+.++.... .+..+.++..|++|.++++++++ .+|.+|
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI 80 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV 80 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 699999999999999999999 9999999987543211 12357889999999999887763 579999
Q ss_pred EcC--------------hh-----------H------HHHHHHhCC--CCeEEEEcccce
Q 029118 169 CPS--------------EG-----------F------ISNAGSLKG--VQHVILLSQGAV 195 (198)
Q Consensus 169 h~a--------------~G-----------~------lldAA~~~G--VkRiV~vSS~~V 195 (198)
|.+ ++ . ++..+++.+ ..|||++||...
T Consensus 81 nnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~ 140 (308)
T PLN00015 81 CNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITG 140 (308)
T ss_pred ECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEecccc
Confidence 862 01 0 244455554 579999999754
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=5.3e-08 Score=82.11 Aligned_cols=100 Identities=17% Similarity=0.089 Sum_probs=71.9
Q ss_pred CCCCeEEEEcCCC--hHHHHHHHHHHHCCCcEEEEEeCC-----------ccc---c---cccCCceEEEEccCCCHHHH
Q 029118 97 EARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDK-----------RNA---M---ESFGTYVESMAGDASNKKFL 157 (198)
Q Consensus 97 ~~~~~ILVTGATG--fIG~~Vvr~Ll~~G~~VralvR~~-----------~~a---~---~~~g~~vevV~GDl~D~~sL 157 (198)
..++++||||||| .||++++++|+++|++|.+..|.. ... . ...+..+.+++.|++|++++
T Consensus 4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i 83 (256)
T PRK12859 4 LKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAP 83 (256)
T ss_pred cCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence 4567999999995 799999999999999998875321 000 0 11244678899999999999
Q ss_pred HHhhc-------CccEEEEcC-------------h-----------hH------HHHHHHhCCCCeEEEEccccee
Q 029118 158 KTALR-------GVRSIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 158 ~~AL~-------GvDaVIh~a-------------~-----------G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
.++++ ..|+|||.+ + +. ++..+++.+-.+||++||....
T Consensus 84 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~ 159 (256)
T PRK12859 84 KELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQ 159 (256)
T ss_pred HHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccC
Confidence 88773 369999872 0 11 2344555556799999997653
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=4.6e-08 Score=83.96 Aligned_cols=70 Identities=17% Similarity=0.208 Sum_probs=56.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cCCceEEEEccCCCHHHHHHhhc------CccE
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------GVRS 166 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~AL~------GvDa 166 (198)
++.++|||| |+||++++++|. +|++|.++.|++++.... .+..+.++.+|++|++++.++++ .+|.
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~ 79 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTG 79 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCE
Confidence 457899998 689999999995 899999999986543211 13457889999999999988874 5899
Q ss_pred EEEc
Q 029118 167 IICP 170 (198)
Q Consensus 167 VIh~ 170 (198)
|||+
T Consensus 80 li~n 83 (275)
T PRK06940 80 LVHT 83 (275)
T ss_pred EEEC
Confidence 9997
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.77 E-value=9.6e-08 Score=77.35 Aligned_cols=59 Identities=14% Similarity=0.267 Sum_probs=52.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc---CccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR---GVRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~---GvDaVIh~ 170 (198)
+++|||||+|.||++++++|.++ ++|.++.|++. .++.|++|+++++++++ ++|.|||+
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-----------~~~~D~~~~~~~~~~~~~~~~id~lv~~ 62 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-----------DVQVDITDPASIRALFEKVGKVDAVVSA 62 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-----------ceEecCCChHHHHHHHHhcCCCCEEEEC
Confidence 47999999999999999999999 99999988653 36789999999988876 68999987
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.77 E-value=6.3e-08 Score=86.48 Aligned_cols=101 Identities=18% Similarity=0.188 Sum_probs=80.0
Q ss_pred cccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc-------cccCCc-eEEEEccCCCHHHHHHhh----
Q 029118 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------ESFGTY-VESMAGDASNKKFLKTAL---- 161 (198)
Q Consensus 94 ~~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~-------~~~g~~-vevV~GDl~D~~sL~~AL---- 161 (198)
.+...++.|+||||+..||.+++.+|..+|..+..++|..++.. +..+.. +.++++|++|.+++.+++
T Consensus 7 ~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~ 86 (282)
T KOG1205|consen 7 MERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAI 86 (282)
T ss_pred HHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHH
Confidence 35667899999999999999999999999999888888765432 223444 899999999999999775
Q ss_pred ---cCccEEEEcC------------------------hhH------HHHHHHhCCCCeEEEEcccc
Q 029118 162 ---RGVRSIICPS------------------------EGF------ISNAGSLKGVQHVILLSQGA 194 (198)
Q Consensus 162 ---~GvDaVIh~a------------------------~G~------lldAA~~~GVkRiV~vSS~~ 194 (198)
.++|.+|+.+ .|+ ++.-+++.+=.|||.+||++
T Consensus 87 ~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSia 152 (282)
T KOG1205|consen 87 RHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIA 152 (282)
T ss_pred HhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccc
Confidence 6899999862 111 34556677788999999975
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.75 E-value=1.2e-07 Score=81.94 Aligned_cols=74 Identities=15% Similarity=0.135 Sum_probs=58.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCC---------ccccc------ccCCceEEEEccCCCHHHHHHhh
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK---------RNAME------SFGTYVESMAGDASNKKFLKTAL 161 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~---------~~a~~------~~g~~vevV~GDl~D~~sL~~AL 161 (198)
..++++|||||++.||++++++|+++|++|.++.|+. +.... ..+..+.++..|++|++++.+++
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 83 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV 83 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence 3467999999999999999999999999999988764 22111 12345778999999999888766
Q ss_pred -------cCccEEEEc
Q 029118 162 -------RGVRSIICP 170 (198)
Q Consensus 162 -------~GvDaVIh~ 170 (198)
..+|.+||+
T Consensus 84 ~~~~~~~g~id~lv~n 99 (286)
T PRK07791 84 DAAVETFGGLDVLVNN 99 (286)
T ss_pred HHHHHhcCCCCEEEEC
Confidence 357999997
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.70 E-value=2e-07 Score=78.49 Aligned_cols=74 Identities=9% Similarity=0.110 Sum_probs=60.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhh-------c-
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTAL-------R- 162 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL-------~- 162 (198)
..+++++||||++.||+.++++|.++|++|.++.|++++..+ ..+..+..++.|++|++++++++ .
T Consensus 3 ~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (227)
T PRK08862 3 IKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR 82 (227)
T ss_pred CCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 346799999999999999999999999999999998765321 12445778889999999998765 2
Q ss_pred CccEEEEc
Q 029118 163 GVRSIICP 170 (198)
Q Consensus 163 GvDaVIh~ 170 (198)
.+|.+||+
T Consensus 83 ~iD~li~n 90 (227)
T PRK08862 83 APDVLVNN 90 (227)
T ss_pred CCCEEEEC
Confidence 58999987
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=98.69 E-value=4.7e-08 Score=82.74 Aligned_cols=71 Identities=17% Similarity=0.134 Sum_probs=53.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCC-ccccc-------ccCCceEEEEccCCCHHHHH----Hhh------
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAME-------SFGTYVESMAGDASNKKFLK----TAL------ 161 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~-~~a~~-------~~g~~vevV~GDl~D~~sL~----~AL------ 161 (198)
+.++||||+|+||++++++|+++|++|.++.|+. +.... ..+..+.++.+|++|++++. +.+
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~ 81 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA 81 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence 5799999999999999999999999999987653 22211 11234667899999987553 222
Q ss_pred -cCccEEEEc
Q 029118 162 -RGVRSIICP 170 (198)
Q Consensus 162 -~GvDaVIh~ 170 (198)
.++|+|||+
T Consensus 82 ~g~iD~lv~n 91 (267)
T TIGR02685 82 FGRCDVLVNN 91 (267)
T ss_pred cCCceEEEEC
Confidence 468999987
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=98.69 E-value=1.2e-07 Score=79.89 Aligned_cols=62 Identities=16% Similarity=0.164 Sum_probs=50.9
Q ss_pred eEEEEcCCChHHHHHHHHHHH----CCCcEEEEEeCCcccccc--------cCCceEEEEccCCCHHHHHHhhc
Q 029118 101 AVLVTDGDSDIGQMVILSLIV----KRTRIKALVKDKRNAMES--------FGTYVESMAGDASNKKFLKTALR 162 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~----~G~~VralvR~~~~a~~~--------~g~~vevV~GDl~D~~sL~~AL~ 162 (198)
.+|||||++.||.+++++|.+ +|++|.++.|+.+..... .+..+.++.+|++|+++++++++
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~ 75 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLK 75 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHH
Confidence 589999999999999999987 799999999987543211 12358889999999999888764
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.68 E-value=2.4e-07 Score=77.94 Aligned_cols=70 Identities=17% Similarity=0.177 Sum_probs=56.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cC-CceEEEEccCCCHHHHHHhh-------cCcc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FG-TYVESMAGDASNKKFLKTAL-------RGVR 165 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g-~~vevV~GDl~D~~sL~~AL-------~GvD 165 (198)
|++|||||++.||+.++++|. +|++|.++.|++++..+. .+ ..+.++.+|++|++++++++ ..+|
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 79 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS 79 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence 479999999999999999998 699999999987654321 12 24788999999999988775 3579
Q ss_pred EEEEc
Q 029118 166 SIICP 170 (198)
Q Consensus 166 aVIh~ 170 (198)
.+||+
T Consensus 80 ~lv~n 84 (246)
T PRK05599 80 LAVVA 84 (246)
T ss_pred EEEEe
Confidence 99986
|
|
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.3e-07 Score=87.67 Aligned_cols=87 Identities=20% Similarity=0.222 Sum_probs=74.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC-CcEEEEEeCCcccccc---cCCceEEEEccCCCHHHHHHhhcCccEEEEcChh-
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALRGVRSIICPSEG- 173 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G-~~VralvR~~~~a~~~---~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a~G- 173 (198)
+++|||.|| |+||+.++..|.+++ .+|.+..|++++..+. .+++++.++.|+.|.+++.+++++.|+||++..+
T Consensus 1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~ 79 (389)
T COG1748 1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPF 79 (389)
T ss_pred CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCch
Confidence 478999999 999999999999998 8999999998765433 2357999999999999999999999999998432
Q ss_pred ---HHHHHHHhCCCCe
Q 029118 174 ---FISNAGSLKGVQH 186 (198)
Q Consensus 174 ---~lldAA~~~GVkR 186 (198)
++++||.++||.-
T Consensus 80 ~~~~i~ka~i~~gv~y 95 (389)
T COG1748 80 VDLTILKACIKTGVDY 95 (389)
T ss_pred hhHHHHHHHHHhCCCE
Confidence 3888999888753
|
|
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.6e-07 Score=84.83 Aligned_cols=99 Identities=15% Similarity=0.096 Sum_probs=78.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc-c---------ccCCceEEEEccCCCHHHHHHhhcCc--cE
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-E---------SFGTYVESMAGDASNKKFLKTALRGV--RS 166 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~-~---------~~g~~vevV~GDl~D~~sL~~AL~Gv--Da 166 (198)
.++.||||-||+-|.++++.|+++||+|..+.|+.+... . .-++.+.++.||++|...|.++++-+ |-
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~PdE 81 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPDE 81 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCchh
Confidence 467899999999999999999999999999998743211 1 11245889999999999999999866 78
Q ss_pred EEEc-C-------------------hhH--HHHHHHhCCC--CeEEEEcccceec
Q 029118 167 IICP-S-------------------EGF--ISNAGSLKGV--QHVILLSQGAVVC 197 (198)
Q Consensus 167 VIh~-a-------------------~G~--lldAA~~~GV--kRiV~vSS~~Vy~ 197 (198)
|++. + .|+ ++||.+..|- -||...||...|+
T Consensus 82 IYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG 136 (345)
T COG1089 82 IYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYG 136 (345)
T ss_pred heeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhc
Confidence 8876 2 233 8999988775 4677778876665
|
|
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.3e-07 Score=85.17 Aligned_cols=86 Identities=22% Similarity=0.295 Sum_probs=66.7
Q ss_pred EEEEcCCChHHHHHHHHHHHCC-C-cEEEEEeCCcccccc----cCCceEEEEccCCCHHHHHHhhcCccEEEEcCh---
Q 029118 102 VLVTDGDSDIGQMVILSLIVKR-T-RIKALVKDKRNAMES----FGTYVESMAGDASNKKFLKTALRGVRSIICPSE--- 172 (198)
Q Consensus 102 ILVTGATGfIG~~Vvr~Ll~~G-~-~VralvR~~~~a~~~----~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a~--- 172 (198)
|+|.|| |++|+.+++.|.++. + +|.+..|+.+++... .+.++++++.|+.|++++.++++++|.||++..
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~~ 79 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPFF 79 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGGG
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccch
Confidence 799999 999999999998876 3 799999998875433 356899999999999999999999999999832
Q ss_pred h-HHHHHHHhCCCCeEEE
Q 029118 173 G-FISNAGSLKGVQHVIL 189 (198)
Q Consensus 173 G-~lldAA~~~GVkRiV~ 189 (198)
+ .++++|.++|+ |.|=
T Consensus 80 ~~~v~~~~i~~g~-~yvD 96 (386)
T PF03435_consen 80 GEPVARACIEAGV-HYVD 96 (386)
T ss_dssp HHHHHHHHHHHT--EEEE
T ss_pred hHHHHHHHHHhCC-Ceec
Confidence 2 28999999987 4444
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=98.58 E-value=4.2e-07 Score=79.83 Aligned_cols=89 Identities=15% Similarity=0.116 Sum_probs=68.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc--CccEEEEcCh-----
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSE----- 172 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~--GvDaVIh~a~----- 172 (198)
|+|||+||||. |+.++++|.++||+|.+.+|+..........+...+..+..|.+.+.+.++ ++|+||+.+.
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtHPfA~~ 79 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPIHQALTVHTGALDPQELREFLKRHSIDILVDATHPFAAQ 79 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccccCCceEEECCCCHHHHHHHHHhcCCCEEEEcCCHHHHH
Confidence 58999999999 999999999999999999998865433322223455566678888988885 5899998732
Q ss_pred --hHHHHHHHhCCCCeEEE
Q 029118 173 --GFISNAGSLKGVQHVIL 189 (198)
Q Consensus 173 --G~lldAA~~~GVkRiV~ 189 (198)
.+..++|++.|+..+=|
T Consensus 80 is~~a~~a~~~~~ipylR~ 98 (256)
T TIGR00715 80 ITTNATAVCKELGIPYVRF 98 (256)
T ss_pred HHHHHHHHHHHhCCcEEEE
Confidence 23788899888877655
|
This enzyme was found to be a monomer by gel filtration. |
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.54 E-value=5.4e-07 Score=81.24 Aligned_cols=98 Identities=14% Similarity=0.147 Sum_probs=76.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc--------cCCceEEEEccCCCHHHHHHhhc------
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--------FGTYVESMAGDASNKKFLKTALR------ 162 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~--------~g~~vevV~GDl~D~~sL~~AL~------ 162 (198)
..+++++|||||..||..++++|..+|.+|...+|+.++..+. ....+.+++.|+.|..++++..+
T Consensus 33 ~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~ 112 (314)
T KOG1208|consen 33 LSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKE 112 (314)
T ss_pred CCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcC
Confidence 3448999999999999999999999999999999998543211 12457789999999999988764
Q ss_pred -CccEEEEcC-----------hhH-----------------HHHHHHhCCCCeEEEEcccc
Q 029118 163 -GVRSIICPS-----------EGF-----------------ISNAGSLKGVQHVILLSQGA 194 (198)
Q Consensus 163 -GvDaVIh~a-----------~G~-----------------lldAA~~~GVkRiV~vSS~~ 194 (198)
..|..|+.+ +|+ +++.++.....|||++||..
T Consensus 113 ~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~ 173 (314)
T KOG1208|consen 113 GPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSIL 173 (314)
T ss_pred CCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCcc
Confidence 346666641 221 56777777669999999953
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.51 E-value=1.1e-06 Score=75.92 Aligned_cols=72 Identities=10% Similarity=0.072 Sum_probs=56.4
Q ss_pred CCCeEEEEcCC--ChHHHHHHHHHHHCCCcEEEEEeCCc---ccc---cccCCceEEEEccCCCHHHHHHhhc-------
Q 029118 98 ARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKR---NAM---ESFGTYVESMAGDASNKKFLKTALR------- 162 (198)
Q Consensus 98 ~~~~ILVTGAT--GfIG~~Vvr~Ll~~G~~VralvR~~~---~a~---~~~g~~vevV~GDl~D~~sL~~AL~------- 162 (198)
.++.+|||||+ +.||+.++++|.++|++|.+..|+.+ ... ...+.. .+++.|++|+++++++++
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~~~g 82 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLKKDLG 82 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHHHcC
Confidence 46799999997 79999999999999999999888742 111 112333 578999999999887763
Q ss_pred CccEEEEc
Q 029118 163 GVRSIICP 170 (198)
Q Consensus 163 GvDaVIh~ 170 (198)
.+|.+||+
T Consensus 83 ~iDilVnn 90 (274)
T PRK08415 83 KIDFIVHS 90 (274)
T ss_pred CCCEEEEC
Confidence 56999887
|
|
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=98.49 E-value=3.1e-07 Score=75.55 Aligned_cols=74 Identities=16% Similarity=0.184 Sum_probs=61.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc---cC--CceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG--TYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~---~g--~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
...++++|+||||.+|+.+++.|...|++|+++.|+.+++... +. .+.++...|+.|.+.+.++++++|.||++
T Consensus 26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~a 104 (194)
T cd01078 26 LKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAA 104 (194)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEEC
Confidence 4567899999999999999999999999999999987654321 11 13566778899999999999999999987
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.48 E-value=7.7e-07 Score=80.43 Aligned_cols=99 Identities=14% Similarity=0.080 Sum_probs=72.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCC--CcEEEEEeCCccc--ccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC-
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNA--MESFGTYVESMAGDASNKKFLKTALRGVRSIICPS- 171 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G--~~VralvR~~~~a--~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a- 171 (198)
..+.+|+||||+|.||+.++..|..++ .+++.+.++.... ........+....+.+|+.++.++++|+|+||+++
T Consensus 6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~Dl~~~~~~~~v~~~td~~~~~~~l~gaDvVVitaG 85 (321)
T PTZ00325 6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSHIDTPAKVTGYADGELWEKALRGADLVLICAG 85 (321)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccccchhhcCcCceEEEecCCCchHHHhCCCCEEEECCC
Confidence 457799999999999999999888555 6888888743222 11111111345567778777788999999999972
Q ss_pred ----hh---------------HHHHHHHhCCCCeEEEEcccce
Q 029118 172 ----EG---------------FISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 172 ----~G---------------~lldAA~~~GVkRiV~vSS~~V 195 (198)
.+ .+++++++++++++|+++|-.+
T Consensus 86 ~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPv 128 (321)
T PTZ00325 86 VPRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPV 128 (321)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcH
Confidence 11 1678899999999999999655
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=98.46 E-value=2.8e-06 Score=72.16 Aligned_cols=73 Identities=10% Similarity=-0.002 Sum_probs=56.1
Q ss_pred CCCeEEEEcCC--ChHHHHHHHHHHHCCCcEEEEEeCCccc------ccc--cCCceEEEEccCCCHHHHHHhhc-----
Q 029118 98 ARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKRNA------MES--FGTYVESMAGDASNKKFLKTALR----- 162 (198)
Q Consensus 98 ~~~~ILVTGAT--GfIG~~Vvr~Ll~~G~~VralvR~~~~a------~~~--~g~~vevV~GDl~D~~sL~~AL~----- 162 (198)
.+++++||||+ +.||+.++++|.++|++|.+..|+.+.. .+. .+..+.+++.|++|++++.++++
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 84 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK 84 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence 45789999986 7999999999999999998876654321 111 12246788999999999987763
Q ss_pred --CccEEEEc
Q 029118 163 --GVRSIICP 170 (198)
Q Consensus 163 --GvDaVIh~ 170 (198)
.+|.+||+
T Consensus 85 ~g~iD~lv~n 94 (258)
T PRK07370 85 WGKLDILVHC 94 (258)
T ss_pred cCCCCEEEEc
Confidence 57999887
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.43 E-value=8.5e-07 Score=74.91 Aligned_cols=73 Identities=8% Similarity=0.057 Sum_probs=58.0
Q ss_pred CCCeEEEEcCC--ChHHHHHHHHHHHCCCcEEEEEeCCccc---ccccCCceEEEEccCCCHHHHHHhhc-------Ccc
Q 029118 98 ARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKRNA---MESFGTYVESMAGDASNKKFLKTALR-------GVR 165 (198)
Q Consensus 98 ~~~~ILVTGAT--GfIG~~Vvr~Ll~~G~~VralvR~~~~a---~~~~g~~vevV~GDl~D~~sL~~AL~-------GvD 165 (198)
.+++++||||+ +.||+.++++|+++|++|.+..|+.+.. .+..+..+.+++.|++|+++++++++ .+|
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD 85 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGKID 85 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCCC
Confidence 45789999999 7999999999999999999998874211 12223457889999999999887653 479
Q ss_pred EEEEc
Q 029118 166 SIICP 170 (198)
Q Consensus 166 aVIh~ 170 (198)
.+||.
T Consensus 86 ~lv~n 90 (252)
T PRK06079 86 GIVHA 90 (252)
T ss_pred EEEEc
Confidence 99886
|
|
| >PRK14874 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.40 E-value=2.3e-06 Score=77.08 Aligned_cols=88 Identities=16% Similarity=0.106 Sum_probs=60.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcE---EEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc-ChhH
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRI---KALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-SEGF 174 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~V---ralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~-a~G~ 174 (198)
+++|+|.||||++|+++++.|.+++|++ ++++|+.+......-.+.++...|+.+. .++++|+||++ ..+.
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~~~g~~i~v~d~~~~-----~~~~vDvVf~A~g~g~ 75 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELSFKGKELKVEDLTTF-----DFSGVDIALFSAGGSV 75 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeeeeCCceeEEeeCCHH-----HHcCCCEEEECCChHH
Confidence 3689999999999999999999988865 8888765433222111245666676542 45799999988 3332
Q ss_pred ---HHHHHHhCCCCeEEEEcc
Q 029118 175 ---ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 175 ---lldAA~~~GVkRiV~vSS 192 (198)
+.....++|+ .+|=+|+
T Consensus 76 s~~~~~~~~~~G~-~VIDlS~ 95 (334)
T PRK14874 76 SKKYAPKAAAAGA-VVIDNSS 95 (334)
T ss_pred HHHHHHHHHhCCC-EEEECCc
Confidence 5566667787 5554554
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=98.39 E-value=1.9e-06 Score=78.53 Aligned_cols=90 Identities=13% Similarity=0.178 Sum_probs=71.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccC-CceEEEEccCCCHHHHHHh-hcCccEEEEc--Chh-H
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTA-LRGVRSIICP--SEG-F 174 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g-~~vevV~GDl~D~~sL~~A-L~GvDaVIh~--a~G-~ 174 (198)
|+|+|.|+ |.+|+++++.|.++|++|+++.|+++....... .+++++.||.+++..+.++ ++++|+||.+ ... +
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~~~~~~n 79 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDRLDVRTVVGNGSSPDVLREAGAEDADLLIAVTDSDETN 79 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEEEecCChHHH
Confidence 47999998 999999999999999999999998876554322 4689999999999999999 9999999987 222 1
Q ss_pred --HHHHHHhC-CCCeEEEE
Q 029118 175 --ISNAGSLK-GVQHVILL 190 (198)
Q Consensus 175 --lldAA~~~-GVkRiV~v 190 (198)
+...+++. +..++|..
T Consensus 80 ~~~~~~~r~~~~~~~ii~~ 98 (453)
T PRK09496 80 MVACQIAKSLFGAPTTIAR 98 (453)
T ss_pred HHHHHHHHHhcCCCeEEEE
Confidence 44556654 66666554
|
|
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.38 E-value=8.3e-07 Score=80.14 Aligned_cols=98 Identities=18% Similarity=0.210 Sum_probs=75.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHHC--CCcEEEEEe-----CCcccc-cccCCceEEEEccCCCHHHHHHhh--cCccEEEE
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVK--RTRIKALVK-----DKRNAM-ESFGTYVESMAGDASNKKFLKTAL--RGVRSIIC 169 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~--G~~VralvR-----~~~~a~-~~~g~~vevV~GDl~D~~sL~~AL--~GvDaVIh 169 (198)
+.+||||+.||||++.++.+... .+....+.. +..... ....++..++.+|+.|...+...+ ..+|.|||
T Consensus 7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~vih 86 (331)
T KOG0747|consen 7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDTVIH 86 (331)
T ss_pred ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhccCchhhhhh
Confidence 78999999999999999999875 455555542 111111 123467899999999999988887 46799998
Q ss_pred c-C-------------------hhH--HHHHHHhC-CCCeEEEEcccceec
Q 029118 170 P-S-------------------EGF--ISNAGSLK-GVQHVILLSQGAVVC 197 (198)
Q Consensus 170 ~-a-------------------~G~--lldAA~~~-GVkRiV~vSS~~Vy~ 197 (198)
. + .++ ++++++.. ++++|||+|+-.||+
T Consensus 87 faa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYG 137 (331)
T KOG0747|consen 87 FAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYG 137 (331)
T ss_pred hHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceec
Confidence 7 2 112 78999877 799999999999996
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.37 E-value=1.4e-06 Score=73.87 Aligned_cols=74 Identities=16% Similarity=0.133 Sum_probs=58.6
Q ss_pred CCCCeEEEEcC--CChHHHHHHHHHHHCCCcEEEEEeCC--cccc---cccCCceEEEEccCCCHHHHHHhh-------c
Q 029118 97 EARDAVLVTDG--DSDIGQMVILSLIVKRTRIKALVKDK--RNAM---ESFGTYVESMAGDASNKKFLKTAL-------R 162 (198)
Q Consensus 97 ~~~~~ILVTGA--TGfIG~~Vvr~Ll~~G~~VralvR~~--~~a~---~~~g~~vevV~GDl~D~~sL~~AL-------~ 162 (198)
..+++++|||| ++.||.+++++|.++|++|.+..|+. +... ...+..+.++..|++|++++++++ .
T Consensus 5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g 84 (256)
T PRK07889 5 LEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVD 84 (256)
T ss_pred ccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 34678999999 89999999999999999999998764 2111 123345778999999999988775 3
Q ss_pred CccEEEEc
Q 029118 163 GVRSIICP 170 (198)
Q Consensus 163 GvDaVIh~ 170 (198)
.+|.+|+.
T Consensus 85 ~iD~li~n 92 (256)
T PRK07889 85 GLDGVVHS 92 (256)
T ss_pred CCcEEEEc
Confidence 57999986
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.36 E-value=2.1e-06 Score=75.67 Aligned_cols=74 Identities=9% Similarity=0.070 Sum_probs=58.6
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCc----------ccc------cccCCceEEEEccCCCHHHHHHh
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR----------NAM------ESFGTYVESMAGDASNKKFLKTA 160 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~----------~a~------~~~g~~vevV~GDl~D~~sL~~A 160 (198)
..++++|||||++.||++++++|+++|++|.++.|+.. ... ...+..+.++++|++|+++++++
T Consensus 6 l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~ 85 (305)
T PRK08303 6 LRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRAL 85 (305)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence 35679999999999999999999999999999999742 111 11133577899999999999877
Q ss_pred hc-------CccEEEEc
Q 029118 161 LR-------GVRSIICP 170 (198)
Q Consensus 161 L~-------GvDaVIh~ 170 (198)
++ .+|.+||.
T Consensus 86 ~~~~~~~~g~iDilVnn 102 (305)
T PRK08303 86 VERIDREQGRLDILVND 102 (305)
T ss_pred HHHHHHHcCCccEEEEC
Confidence 63 57888875
|
|
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.34 E-value=2.9e-06 Score=76.75 Aligned_cols=99 Identities=15% Similarity=0.135 Sum_probs=70.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCC--cEEEEEeCCccc--ccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC-
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNA--MESFGTYVESMAGDASNKKFLKTALRGVRSIICPS- 171 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~--~VralvR~~~~a--~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a- 171 (198)
++..+|+||||+|+||.+++..|..++. +++.+.+++... ..+..........++.+.+++.++++|+|.|||++
T Consensus 16 ~~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVVitAG 95 (323)
T PLN00106 16 APGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSHINTPAQVRGFLGDDQLGDALKGADLVIIPAG 95 (323)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEchhhhCCcCceEEEEeCCCCHHHHcCCCCEEEEeCC
Confidence 4556999999999999999998887664 799998876211 11111111223445445556788999999999982
Q ss_pred ----hh---------------HHHHHHHhCCCCeEEEEcccce
Q 029118 172 ----EG---------------FISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 172 ----~G---------------~lldAA~~~GVkRiV~vSS~~V 195 (198)
.+ .+.+++++++.+++|+++|--+
T Consensus 96 ~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPv 138 (323)
T PLN00106 96 VPRKPGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPV 138 (323)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCc
Confidence 11 1678888999999999998544
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.34 E-value=2.6e-06 Score=69.83 Aligned_cols=74 Identities=15% Similarity=0.161 Sum_probs=59.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhh-------cC
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTAL-------RG 163 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL-------~G 163 (198)
..++.++||||++.||+.+++.|.++|++|.+..|+.+.... ..+..+.++..|++|++.+.+++ ..
T Consensus 14 l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~ 93 (169)
T PRK06720 14 LAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSR 93 (169)
T ss_pred cCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 457799999999999999999999999999999987653311 12445678899999999887754 36
Q ss_pred ccEEEEc
Q 029118 164 VRSIICP 170 (198)
Q Consensus 164 vDaVIh~ 170 (198)
+|.+||.
T Consensus 94 iDilVnn 100 (169)
T PRK06720 94 IDMLFQN 100 (169)
T ss_pred CCEEEEC
Confidence 8999987
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.32 E-value=2.9e-06 Score=72.15 Aligned_cols=73 Identities=10% Similarity=0.090 Sum_probs=57.4
Q ss_pred CCCeEEEEcCC--ChHHHHHHHHHHHCCCcEEEEEeCCc---ccc---ccc-CCceEEEEccCCCHHHHHHhhc------
Q 029118 98 ARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKR---NAM---ESF-GTYVESMAGDASNKKFLKTALR------ 162 (198)
Q Consensus 98 ~~~~ILVTGAT--GfIG~~Vvr~Ll~~G~~VralvR~~~---~a~---~~~-g~~vevV~GDl~D~~sL~~AL~------ 162 (198)
.+++++||||+ +-||++++++|.++|++|.+..|+.. ... ... +.++.+++.|++|++++.++++
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 85 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV 85 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence 46789999997 89999999999999999999877532 111 111 3457889999999999888763
Q ss_pred -CccEEEEc
Q 029118 163 -GVRSIICP 170 (198)
Q Consensus 163 -GvDaVIh~ 170 (198)
.+|.+||+
T Consensus 86 g~ld~lv~n 94 (257)
T PRK08594 86 GVIHGVAHC 94 (257)
T ss_pred CCccEEEEC
Confidence 46999876
|
|
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=98.31 E-value=1.3e-06 Score=78.75 Aligned_cols=70 Identities=16% Similarity=0.068 Sum_probs=51.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC-------CcEEEEEeCCcccccccCCceE------EEEccCCCHHHHHHhhcCccE
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKR-------TRIKALVKDKRNAMESFGTYVE------SMAGDASNKKFLKTALRGVRS 166 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G-------~~VralvR~~~~a~~~~g~~ve------vV~GDl~D~~sL~~AL~GvDa 166 (198)
.+|+||||+|++|++++..|+..+ .+|++++|++... ...+...+ ...+|+.+...+.++++|+|.
T Consensus 3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~-~~~g~~~Dl~d~~~~~~~~~~~~~~~~~~l~~aDi 81 (325)
T cd01336 3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALK-ALEGVVMELQDCAFPLLKSVVATTDPEEAFKDVDV 81 (325)
T ss_pred eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccc-cccceeeehhhccccccCCceecCCHHHHhCCCCE
Confidence 479999999999999999998854 5899999865321 11121122 223455556788899999999
Q ss_pred EEEc
Q 029118 167 IICP 170 (198)
Q Consensus 167 VIh~ 170 (198)
|||+
T Consensus 82 VI~t 85 (325)
T cd01336 82 AILV 85 (325)
T ss_pred EEEe
Confidence 9998
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase | Back alignment and domain information |
|---|
Probab=98.30 E-value=1.9e-06 Score=79.52 Aligned_cols=95 Identities=19% Similarity=0.214 Sum_probs=64.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHC-CCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHh-hcCccEEEEc-ChhH
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICP-SEGF 174 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~-G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~A-L~GvDaVIh~-a~G~ 174 (198)
.+++|.|.||||++|+.+++.|.++ .++|+.++++.+..+........+..+|+.+...++.+ ++++|+||.+ ..+.
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf~Alp~~~ 116 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGSVFPHLITQDLPNLVAVKDADFSDVDAVFCCLPHGT 116 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhhCccccCccccceecCCHHHhcCCCEEEEcCCHHH
Confidence 5568999999999999999999888 78999999865432221111223344565544444443 7899999987 3332
Q ss_pred ---HHHHHHhCCCCeEEEEcccc
Q 029118 175 ---ISNAGSLKGVQHVILLSQGA 194 (198)
Q Consensus 175 ---lldAA~~~GVkRiV~vSS~~ 194 (198)
++.++ ++| .+||-+|+..
T Consensus 117 s~~i~~~~-~~g-~~VIDlSs~f 137 (381)
T PLN02968 117 TQEIIKAL-PKD-LKIVDLSADF 137 (381)
T ss_pred HHHHHHHH-hCC-CEEEEcCchh
Confidence 66665 456 6888888753
|
|
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.25 E-value=3.3e-06 Score=72.87 Aligned_cols=73 Identities=19% Similarity=0.247 Sum_probs=53.6
Q ss_pred CCCeEEEEcCC----------------ChHHHHHHHHHHHCCCcEEEEEeCCccccccc--CCceEEEEccCCCHHHHHH
Q 029118 98 ARDAVLVTDGD----------------SDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKT 159 (198)
Q Consensus 98 ~~~~ILVTGAT----------------GfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~--g~~vevV~GDl~D~~sL~~ 159 (198)
.+++||||+|- ||+|++++++|+.+|++|+++.+......... ...+..+.++....+.+.+
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~~~~~~~~V~s~~d~~~~l~~ 81 (229)
T PRK09620 2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDINNQLELHPFEGIIDLQDKMKS 81 (229)
T ss_pred CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccCCceeEEEEecHHHHHHHHHH
Confidence 46789999774 99999999999999999999986432111111 1234456775555568888
Q ss_pred hhc--CccEEEEc
Q 029118 160 ALR--GVRSIICP 170 (198)
Q Consensus 160 AL~--GvDaVIh~ 170 (198)
+++ ++|+|||+
T Consensus 82 ~~~~~~~D~VIH~ 94 (229)
T PRK09620 82 IITHEKVDAVIMA 94 (229)
T ss_pred HhcccCCCEEEEC
Confidence 884 78999998
|
|
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=98.24 E-value=8.5e-06 Score=61.04 Aligned_cols=68 Identities=19% Similarity=0.240 Sum_probs=56.5
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHh-hcCccEEEEc
Q 029118 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICP 170 (198)
Q Consensus 102 ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~A-L~GvDaVIh~ 170 (198)
|+|.|. |.+|+.+++.|.+.+.+|.++.++++........+++++.||.+|++.|+++ ++.+++||.+
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~ 69 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELREEGVEVIYGDATDPEVLERAGIEKADAVVIL 69 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTSEEEES-TTSHHHHHHTTGGCESEEEEE
T ss_pred eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhcccccccccchhhhHHhhcCccccCEEEEc
Confidence 567777 6899999999999777999999998776555455689999999999999986 6889999987
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >PRK06732 phosphopantothenate--cysteine ligase; Validated | Back alignment and domain information |
|---|
Probab=98.22 E-value=4.7e-06 Score=71.56 Aligned_cols=65 Identities=5% Similarity=0.121 Sum_probs=48.3
Q ss_pred EcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCC--HHHHHHhhcCccEEEEc
Q 029118 105 TDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN--KKFLKTALRGVRSIICP 170 (198)
Q Consensus 105 TGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D--~~sL~~AL~GvDaVIh~ 170 (198)
-.+|||+|++++++|+++|++|+++.|+..... ....+++++..+..+ .+.+.+++.++|+|||+
T Consensus 22 N~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~-~~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~ 88 (229)
T PRK06732 22 NHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP-EPHPNLSIIEIENVDDLLETLEPLVKDHDVLIHS 88 (229)
T ss_pred CccchHHHHHHHHHHHhCCCEEEEEECcccccC-CCCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeC
Confidence 367999999999999999999999987653221 112357777654332 35677778899999998
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.22 E-value=5e-06 Score=71.48 Aligned_cols=73 Identities=8% Similarity=0.053 Sum_probs=56.6
Q ss_pred CCCCeEEEEcCCC--hHHHHHHHHHHHCCCcEEEEEeCCccc---cc---ccCCceEEEEccCCCHHHHHHhh-------
Q 029118 97 EARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKRNA---ME---SFGTYVESMAGDASNKKFLKTAL------- 161 (198)
Q Consensus 97 ~~~~~ILVTGATG--fIG~~Vvr~Ll~~G~~VralvR~~~~a---~~---~~g~~vevV~GDl~D~~sL~~AL------- 161 (198)
..++.+|||||++ .||+.++++|.++|++|.+..|+.... .. ..+. ..++++|++|++++++++
T Consensus 5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~-~~~~~~Dv~d~~~v~~~~~~~~~~~ 83 (271)
T PRK06505 5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGS-DFVLPCDVEDIASVDAVFEALEKKW 83 (271)
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCC-ceEEeCCCCCHHHHHHHHHHHHHHh
Confidence 3467899999997 999999999999999999988865321 11 1122 346899999999988776
Q ss_pred cCccEEEEc
Q 029118 162 RGVRSIICP 170 (198)
Q Consensus 162 ~GvDaVIh~ 170 (198)
..+|.+||+
T Consensus 84 g~iD~lVnn 92 (271)
T PRK06505 84 GKLDFVVHA 92 (271)
T ss_pred CCCCEEEEC
Confidence 357999986
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=98.21 E-value=7.6e-06 Score=90.21 Aligned_cols=98 Identities=18% Similarity=0.261 Sum_probs=75.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHC-CCcEEEEEeCCccc----------------------------------------
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNA---------------------------------------- 136 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~-G~~VralvR~~~~a---------------------------------------- 136 (198)
.++++|||||++.||..++++|.++ |.+|.++.|++...
T Consensus 1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813 1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence 4679999999999999999999988 69999999982100
Q ss_pred -------------ccccCCceEEEEccCCCHHHHHHhhc------CccEEEEcC------------------------hh
Q 029118 137 -------------MESFGTYVESMAGDASNKKFLKTALR------GVRSIICPS------------------------EG 173 (198)
Q Consensus 137 -------------~~~~g~~vevV~GDl~D~~sL~~AL~------GvDaVIh~a------------------------~G 173 (198)
....+..++++.+|++|.+++.++++ ++|.|||.+ .|
T Consensus 2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G 2155 (2582)
T TIGR02813 2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDG 2155 (2582)
T ss_pred cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHH
Confidence 01124568899999999999988874 579999972 11
Q ss_pred H--HHHHHHhCCCCeEEEEcccce
Q 029118 174 F--ISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 174 ~--lldAA~~~GVkRiV~vSS~~V 195 (198)
. +++++.....++||++||...
T Consensus 2156 ~~~Ll~al~~~~~~~IV~~SSvag 2179 (2582)
T TIGR02813 2156 LLSLLAALNAENIKLLALFSSAAG 2179 (2582)
T ss_pred HHHHHHHHHHhCCCeEEEEechhh
Confidence 1 566666667789999999643
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.21 E-value=6.4e-06 Score=69.80 Aligned_cols=74 Identities=8% Similarity=-0.072 Sum_probs=57.0
Q ss_pred CCCCeEEEEcCC--ChHHHHHHHHHHHCCCcEEEEEeCCccc---cccc--CCceEEEEccCCCHHHHHHhh-------c
Q 029118 97 EARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKRNA---MESF--GTYVESMAGDASNKKFLKTAL-------R 162 (198)
Q Consensus 97 ~~~~~ILVTGAT--GfIG~~Vvr~Ll~~G~~VralvR~~~~a---~~~~--g~~vevV~GDl~D~~sL~~AL-------~ 162 (198)
..++++|||||+ +.||+.++++|+++|++|.+..|+.+.. .+.. ...+.++..|++|++++++++ .
T Consensus 8 ~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 87 (258)
T PRK07533 8 LAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWG 87 (258)
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcC
Confidence 456799999998 5999999999999999999998875321 1110 123467899999999988775 3
Q ss_pred CccEEEEc
Q 029118 163 GVRSIICP 170 (198)
Q Consensus 163 GvDaVIh~ 170 (198)
.+|.+||+
T Consensus 88 ~ld~lv~n 95 (258)
T PRK07533 88 RLDFLLHS 95 (258)
T ss_pred CCCEEEEc
Confidence 57999886
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.14 E-value=1e-05 Score=69.51 Aligned_cols=73 Identities=10% Similarity=0.059 Sum_probs=56.7
Q ss_pred CCCeEEEEcCCC--hHHHHHHHHHHHCCCcEEEEEeCCc---ccccc--cCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 98 ARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKR---NAMES--FGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 98 ~~~~ILVTGATG--fIG~~Vvr~Ll~~G~~VralvR~~~---~a~~~--~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
.+++++||||++ .||+.++++|+++|++|.+..|+.. ...+. ..+.+..+.+|++|+++++++++ .
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 84 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK 84 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence 457899999986 8999999999999999988888631 11111 11345678999999999998773 4
Q ss_pred ccEEEEc
Q 029118 164 VRSIICP 170 (198)
Q Consensus 164 vDaVIh~ 170 (198)
+|.+||+
T Consensus 85 iD~linn 91 (262)
T PRK07984 85 FDGFVHS 91 (262)
T ss_pred CCEEEEC
Confidence 6999987
|
|
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.13 E-value=1.1e-05 Score=76.55 Aligned_cols=100 Identities=22% Similarity=0.282 Sum_probs=73.0
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCC---CcEEEEEeCCcc--ccccc----------------C---CceEEEEccC
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKR---TRIKALVKDKRN--AMESF----------------G---TYVESMAGDA 151 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G---~~VralvR~~~~--a~~~~----------------g---~~vevV~GDl 151 (198)
-...++|||||||||+|.-++..|+..- -++-.+.|.... +.+++ + ..+..+.||+
T Consensus 9 f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi 88 (467)
T KOG1221|consen 9 FYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDI 88 (467)
T ss_pred HhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccc
Confidence 3457899999999999999999998753 267777886532 11110 0 3577899999
Q ss_pred CCH------HHHHHhhcCccEEEEcC-----------------hhH--HHHHHHhC-CCCeEEEEcccce
Q 029118 152 SNK------KFLKTALRGVRSIICPS-----------------EGF--ISNAGSLK-GVQHVILLSQGAV 195 (198)
Q Consensus 152 ~D~------~sL~~AL~GvDaVIh~a-----------------~G~--lldAA~~~-GVkRiV~vSS~~V 195 (198)
.++ +.+....+.++.|||++ .|+ +++.|++. ..+-+||+|+.-+
T Consensus 89 ~~~~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~ 158 (467)
T KOG1221|consen 89 SEPDLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYS 158 (467)
T ss_pred cCcccCCChHHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhhe
Confidence 863 55666778999999982 133 78888765 6899999998543
|
|
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.13 E-value=1.8e-05 Score=67.78 Aligned_cols=90 Identities=17% Similarity=0.247 Sum_probs=70.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccC--CceEEEEccCCCHHHHHHh-hcCccEEEEc-C--hh
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTA-LRGVRSIICP-S--EG 173 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g--~~vevV~GDl~D~~sL~~A-L~GvDaVIh~-a--~G 173 (198)
|+++|.| .|.+|++|++.|.+.||+|.++.++++...+... ....++.||-+|++.|++| ++.+|+++.+ . .-
T Consensus 1 m~iiIiG-~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~d~~ 79 (225)
T COG0569 1 MKIIIIG-AGRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGNDEV 79 (225)
T ss_pred CEEEEEC-CcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCCCHH
Confidence 3455555 6899999999999999999999999987655333 5589999999999999999 8999999987 2 22
Q ss_pred H--HHHHH-HhCCCCeEEEE
Q 029118 174 F--ISNAG-SLKGVQHVILL 190 (198)
Q Consensus 174 ~--lldAA-~~~GVkRiV~v 190 (198)
+ +...| ++.|++++|--
T Consensus 80 N~i~~~la~~~~gv~~viar 99 (225)
T COG0569 80 NSVLALLALKEFGVPRVIAR 99 (225)
T ss_pred HHHHHHHHHHhcCCCcEEEE
Confidence 2 33334 44799888753
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.12 E-value=1.1e-05 Score=68.54 Aligned_cols=74 Identities=7% Similarity=0.025 Sum_probs=55.9
Q ss_pred CCCCeEEEEcC--CChHHHHHHHHHHHCCCcEEEEEeCCc---ccccc--cCCceEEEEccCCCHHHHHHhhc-------
Q 029118 97 EARDAVLVTDG--DSDIGQMVILSLIVKRTRIKALVKDKR---NAMES--FGTYVESMAGDASNKKFLKTALR------- 162 (198)
Q Consensus 97 ~~~~~ILVTGA--TGfIG~~Vvr~Ll~~G~~VralvR~~~---~a~~~--~g~~vevV~GDl~D~~sL~~AL~------- 162 (198)
..++++||||| ++.||++++++|+++|++|.+..|+.. ...+. .......+++|++|+++++++++
T Consensus 4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 83 (261)
T PRK08690 4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWD 83 (261)
T ss_pred cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhC
Confidence 34678999997 679999999999999999988766532 11111 11234578999999999988763
Q ss_pred CccEEEEc
Q 029118 163 GVRSIICP 170 (198)
Q Consensus 163 GvDaVIh~ 170 (198)
.+|.+||+
T Consensus 84 ~iD~lVnn 91 (261)
T PRK08690 84 GLDGLVHS 91 (261)
T ss_pred CCcEEEEC
Confidence 57999987
|
|
| >PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=98.10 E-value=1.4e-05 Score=72.65 Aligned_cols=88 Identities=14% Similarity=0.122 Sum_probs=56.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEE--EEeCCcccccccC-CceEEEEccCCCHHHHHHhhcCccEEEEc-ChhH
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKA--LVKDKRNAMESFG-TYVESMAGDASNKKFLKTALRGVRSIICP-SEGF 174 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~Vra--lvR~~~~a~~~~g-~~vevV~GDl~D~~sL~~AL~GvDaVIh~-a~G~ 174 (198)
+.+|+|+||||++|+.+++.|.+++|++.. .+++.+.+.+... .+ ...++.+.+.. .++++|.||.+ ..+.
T Consensus 4 ~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~aG~~l~~~~---~~l~~~~~~~~--~~~~vD~vFla~p~~~ 78 (336)
T PRK05671 4 PLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSESAGHSVPFAG---KNLRVREVDSF--DFSQVQLAFFAAGAAV 78 (336)
T ss_pred CCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcccCCCeeccCC---cceEEeeCChH--HhcCCCEEEEcCCHHH
Confidence 468999999999999999999988887665 3344443321111 11 23444443332 25899999987 3332
Q ss_pred ---HHHHHHhCCCCeEEEEcc
Q 029118 175 ---ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 175 ---lldAA~~~GVkRiV~vSS 192 (198)
+++.+.++|++ +|=.|+
T Consensus 79 s~~~v~~~~~~G~~-VIDlS~ 98 (336)
T PRK05671 79 SRSFAEKARAAGCS-VIDLSG 98 (336)
T ss_pred HHHHHHHHHHCCCe-EEECch
Confidence 77778888864 444443
|
|
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.09 E-value=3.4e-06 Score=77.11 Aligned_cols=69 Identities=20% Similarity=0.199 Sum_probs=52.4
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHC-C-CcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVK-R-TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~-G-~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+..+++|+||||+|+||++++++|+++ | .++..+.|+..++.... .++..+++. .+.+++.++|.|||+
T Consensus 152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La---~el~~~~i~---~l~~~l~~aDiVv~~ 222 (340)
T PRK14982 152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQ---AELGGGKIL---SLEEALPEADIVVWV 222 (340)
T ss_pred CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHH---HHhccccHH---hHHHHHccCCEEEEC
Confidence 567789999999999999999999865 5 58888888766553321 123334443 477899999999998
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=98.06 E-value=2.6e-05 Score=71.11 Aligned_cols=95 Identities=20% Similarity=0.247 Sum_probs=72.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc--cCCceEEEEccCCCHHHHHHh-hcCccEEEEcC--
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--FGTYVESMAGDASNKKFLKTA-LRGVRSIICPS-- 171 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~--~g~~vevV~GDl~D~~sL~~A-L~GvDaVIh~a-- 171 (198)
.++++|+|.|+ |.+|+++++.|.++|++|.++.++++..... ...++.++.||.+|++.|+++ ++.+++||.+.
T Consensus 229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~~~~~ 307 (453)
T PRK09496 229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEELPNTLVLHGDGTDQELLEEEGIDEADAFIALTND 307 (453)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHCCCCeEEECCCCCHHHHHhcCCccCCEEEECCCC
Confidence 34678999999 9999999999999999999999988754332 224578999999999999654 58899998772
Q ss_pred -hhH--HHHHHHhCCCCeEEEEcc
Q 029118 172 -EGF--ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 172 -~G~--lldAA~~~GVkRiV~vSS 192 (198)
..+ +...|++.++.+++....
T Consensus 308 ~~~n~~~~~~~~~~~~~~ii~~~~ 331 (453)
T PRK09496 308 DEANILSSLLAKRLGAKKVIALVN 331 (453)
T ss_pred cHHHHHHHHHHHHhCCCeEEEEEC
Confidence 222 334567778887776543
|
|
| >KOG4288 consensus Predicted oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.06 E-value=2.2e-06 Score=75.75 Aligned_cols=95 Identities=20% Similarity=0.219 Sum_probs=79.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc-cccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC------
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS------ 171 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~-a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a------ 171 (198)
-...||.|+.||.|.+|++..+..++.|-.+.|+..+ ....+..++.|+++|.....-+..++.|+..|+-+.
T Consensus 52 ~e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k~~l~sw~~~vswh~gnsfssn~~k~~l~g~t~v~e~~ggfgn~ 131 (283)
T KOG4288|consen 52 VEWTLVLGGNPFSGSEVLKNATNVVHSVGILSENENKQTLSSWPTYVSWHRGNSFSSNPNKLKLSGPTFVYEMMGGFGNI 131 (283)
T ss_pred HHHHhhhcCCCcchHHHHHHHHhhceeeeEeecccCcchhhCCCcccchhhccccccCcchhhhcCCcccHHHhcCccch
Confidence 4468999999999999999999999999999998654 334466789999999998888899999999998761
Q ss_pred ------hhH----HHHHHHhCCCCeEEEEccc
Q 029118 172 ------EGF----ISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 172 ------~G~----lldAA~~~GVkRiV~vSS~ 193 (198)
.|+ -+.+|.++||++|||+|..
T Consensus 132 ~~m~~ing~ani~a~kaa~~~gv~~fvyISa~ 163 (283)
T KOG4288|consen 132 ILMDRINGTANINAVKAAAKAGVPRFVYISAH 163 (283)
T ss_pred HHHHHhccHhhHHHHHHHHHcCCceEEEEEhh
Confidence 121 4577889999999999974
|
|
| >TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=98.06 E-value=2.1e-05 Score=71.33 Aligned_cols=86 Identities=16% Similarity=0.161 Sum_probs=57.5
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCcEEEEE---eCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC-hhH--
Q 029118 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALV---KDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-EGF-- 174 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~G~~Vralv---R~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a-~G~-- 174 (198)
+|+|.||||++|+.+++.|.+++|++..++ ++.+......-.+.+.+..|+. ..+++++|+||.+. .+.
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~~~~~~~~~~~~~-----~~~~~~~D~v~~a~g~~~s~ 75 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRKVTFKGKELEVNEAK-----IESFEGIDIALFSAGGSVSK 75 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCeeeeCCeeEEEEeCC-----hHHhcCCCEEEECCCHHHHH
Confidence 489999999999999999999899876554 5543322211123567777774 23468999999883 332
Q ss_pred -HHHHHHhCCCCeEEEEcc
Q 029118 175 -ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 175 -lldAA~~~GVkRiV~vSS 192 (198)
++..+.++|+ ++|=+|+
T Consensus 76 ~~a~~~~~~G~-~VID~ss 93 (339)
T TIGR01296 76 EFAPKAAKCGA-IVIDNTS 93 (339)
T ss_pred HHHHHHHHCCC-EEEECCH
Confidence 5555666787 4554443
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978. |
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.05 E-value=1.4e-05 Score=67.85 Aligned_cols=72 Identities=10% Similarity=-0.025 Sum_probs=54.7
Q ss_pred CCCeEEEEcCCC--hHHHHHHHHHHHCCCcEEEEEeCCcc---cccc---cCCceEEEEccCCCHHHHHHhhc-------
Q 029118 98 ARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKRN---AMES---FGTYVESMAGDASNKKFLKTALR------- 162 (198)
Q Consensus 98 ~~~~ILVTGATG--fIG~~Vvr~Ll~~G~~VralvR~~~~---a~~~---~g~~vevV~GDl~D~~sL~~AL~------- 162 (198)
.++.++||||++ .||++++++|.++|++|.+..|+... ..+. .+. ..+++.|++|+++++++++
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~-~~~~~~Dv~~~~~v~~~~~~~~~~~g 85 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGC-NFVSELDVTNPKSISNLFDDIKEKWG 85 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCC-ceEEEccCCCHHHHHHHHHHHHHHcC
Confidence 357899999997 79999999999999999888877421 1111 122 2357899999999888773
Q ss_pred CccEEEEc
Q 029118 163 GVRSIICP 170 (198)
Q Consensus 163 GvDaVIh~ 170 (198)
.+|.+|+.
T Consensus 86 ~iDilVnn 93 (260)
T PRK06603 86 SFDFLLHG 93 (260)
T ss_pred CccEEEEc
Confidence 47888875
|
|
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.05 E-value=4.2e-05 Score=69.59 Aligned_cols=76 Identities=21% Similarity=0.217 Sum_probs=62.4
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccccc----CCceEEEEccCCCHHHHHHhhc--------
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF----GTYVESMAGDASNKKFLKTALR-------- 162 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~----g~~vevV~GDl~D~~sL~~AL~-------- 162 (198)
...+.+.|||||+....|+.++++|.++|+.|.|-+-+++.+.... .++...++.|+++++++++|.+
T Consensus 25 ~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~ 104 (322)
T KOG1610|consen 25 DSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGE 104 (322)
T ss_pred cccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccc
Confidence 3566788999999999999999999999999999997776654322 4667888999999999999984
Q ss_pred -CccEEEEc
Q 029118 163 -GVRSIICP 170 (198)
Q Consensus 163 -GvDaVIh~ 170 (198)
|-=+||+.
T Consensus 105 ~gLwglVNN 113 (322)
T KOG1610|consen 105 DGLWGLVNN 113 (322)
T ss_pred ccceeEEec
Confidence 44566665
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=98.04 E-value=2.9e-05 Score=64.39 Aligned_cols=74 Identities=15% Similarity=0.236 Sum_probs=57.1
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc-----cccccC----CceEEEEccCCC-HHHHHHhh-----
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AMESFG----TYVESMAGDASN-KKFLKTAL----- 161 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~-----a~~~~g----~~vevV~GDl~D-~~sL~~AL----- 161 (198)
..++.+|||||++.||..+++.|+++|+.|.++.|+... ...... ..+.+...|+++ .+.++.++
T Consensus 3 ~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~ 82 (251)
T COG1028 3 LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEE 82 (251)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHH
Confidence 457889999999999999999999999999999887543 111122 357778899998 88777665
Q ss_pred --cCccEEEEc
Q 029118 162 --RGVRSIICP 170 (198)
Q Consensus 162 --~GvDaVIh~ 170 (198)
.++|.+|+.
T Consensus 83 ~~g~id~lvnn 93 (251)
T COG1028 83 EFGRIDILVNN 93 (251)
T ss_pred HcCCCCEEEEC
Confidence 347877775
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.03 E-value=2e-05 Score=67.80 Aligned_cols=71 Identities=6% Similarity=0.031 Sum_probs=55.3
Q ss_pred CCeEEEEcCC--ChHHHHHHHHHHHCCCcEEEEEeCCc---cccc---ccCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 99 RDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKR---NAME---SFGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 99 ~~~ILVTGAT--GfIG~~Vvr~Ll~~G~~VralvR~~~---~a~~---~~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
++++|||||+ +.||+.++++|.++|++|.+..|+.. ...+ ..+ ....+++|++|+++++++++ .
T Consensus 10 ~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 88 (272)
T PRK08159 10 GKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELG-AFVAGHCDVTDEASIDAVFETLEKKWGK 88 (272)
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcC-CceEEecCCCCHHHHHHHHHHHHHhcCC
Confidence 4689999997 89999999999999999988877631 1111 122 25578999999999988763 4
Q ss_pred ccEEEEc
Q 029118 164 VRSIICP 170 (198)
Q Consensus 164 vDaVIh~ 170 (198)
+|.+||.
T Consensus 89 iD~lv~n 95 (272)
T PRK08159 89 LDFVVHA 95 (272)
T ss_pred CcEEEEC
Confidence 7999987
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.02 E-value=1.2e-05 Score=68.53 Aligned_cols=72 Identities=14% Similarity=0.180 Sum_probs=54.6
Q ss_pred CCCeEEEEcC--CChHHHHHHHHHHHCCCcEEEEEeC---Cccccc---ccCCceEEEEccCCCHHHHHHhhc-------
Q 029118 98 ARDAVLVTDG--DSDIGQMVILSLIVKRTRIKALVKD---KRNAME---SFGTYVESMAGDASNKKFLKTALR------- 162 (198)
Q Consensus 98 ~~~~ILVTGA--TGfIG~~Vvr~Ll~~G~~VralvR~---~~~a~~---~~g~~vevV~GDl~D~~sL~~AL~------- 162 (198)
.++++||||| ++.||+.++++|+++|++|.+..|. .+...+ ..+ ...++..|++|++++.++++
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g 83 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG-SDLVFPCDVASDEQIDALFASLGQHWD 83 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcC-CcceeeccCCCHHHHHHHHHHHHHHhC
Confidence 4678999996 6799999999999999999887543 222211 122 23468899999999988873
Q ss_pred CccEEEEc
Q 029118 163 GVRSIICP 170 (198)
Q Consensus 163 GvDaVIh~ 170 (198)
.+|.+||+
T Consensus 84 ~iD~lvnn 91 (260)
T PRK06997 84 GLDGLVHS 91 (260)
T ss_pred CCcEEEEc
Confidence 57999886
|
|
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.01 E-value=3.8e-05 Score=68.87 Aligned_cols=92 Identities=14% Similarity=0.098 Sum_probs=63.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHH---CCCcEEEEEeCCccc---ccccC-CceEEEEccCCCHHHHHHhhcCccEEEEcC-
Q 029118 100 DAVLVTDGDSDIGQMVILSLIV---KRTRIKALVKDKRNA---MESFG-TYVESMAGDASNKKFLKTALRGVRSIICPS- 171 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~---~G~~VralvR~~~~a---~~~~g-~~vevV~GDl~D~~sL~~AL~GvDaVIh~a- 171 (198)
++|+|.||||.||++++..|.. .++++.++.|++... ..... +....+.+ .+.+.+.++++++|.||.++
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~--~~~~d~~~~l~~~DiVIitaG 78 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKG--FSGEDPTPALEGADVVLISAG 78 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcCCCCceEEE--eCCCCHHHHcCCCCEEEEcCC
Confidence 5899999999999999987744 346888888875321 11111 11223444 22345677889999999872
Q ss_pred ----hh---------------HHHHHHHhCCCCeEEEEccc
Q 029118 172 ----EG---------------FISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 172 ----~G---------------~lldAA~~~GVkRiV~vSS~ 193 (198)
.+ .+++++++++.+++|.+.|-
T Consensus 79 ~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvsN 119 (312)
T PRK05086 79 VARKPGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIITN 119 (312)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence 11 16788889999999999874
|
|
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.98 E-value=3.1e-05 Score=79.62 Aligned_cols=98 Identities=14% Similarity=0.081 Sum_probs=72.0
Q ss_pred CccccCCCCeEEEEcCCChHHHHHHHHHHHC-CCc-------------EEEEEeCCcccccccC--CceEEEEccCCCHH
Q 029118 92 DEFPEEARDAVLVTDGDSDIGQMVILSLIVK-RTR-------------IKALVKDKRNAMESFG--TYVESMAGDASNKK 155 (198)
Q Consensus 92 ~~~~~~~~~~ILVTGATGfIG~~Vvr~Ll~~-G~~-------------VralvR~~~~a~~~~g--~~vevV~GDl~D~~ 155 (198)
.......+++|+|.|| |++|+.+++.|... +++ |.+..++++.+.+... ++++.++.|+.|.+
T Consensus 562 ~~~~~~~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e 640 (1042)
T PLN02819 562 KAEVTKKSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSE 640 (1042)
T ss_pred cccccccCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHH
Confidence 3344566789999997 99999999999764 333 5555666655443211 35788999999999
Q ss_pred HHHHhhcCccEEEEcC----hhHHHHHHHhCCCCeEEEEc
Q 029118 156 FLKTALRGVRSIICPS----EGFISNAGSLKGVQHVILLS 191 (198)
Q Consensus 156 sL~~AL~GvDaVIh~a----~G~lldAA~~~GVkRiV~vS 191 (198)
.+.++++++|+||.+. ...++.+|.++|+ |+|-.|
T Consensus 641 ~L~~~v~~~DaVIsalP~~~H~~VAkaAieaGk-Hvv~ek 679 (1042)
T PLN02819 641 SLLKYVSQVDVVISLLPASCHAVVAKACIELKK-HLVTAS 679 (1042)
T ss_pred HHHHhhcCCCEEEECCCchhhHHHHHHHHHcCC-CEEECc
Confidence 9999999999999882 2237788888884 666554
|
|
| >PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.00013 Score=56.15 Aligned_cols=86 Identities=21% Similarity=0.277 Sum_probs=52.6
Q ss_pred eEEEEcCCChHHHHHHHHHHHC-CCcEEEEEeCCc-cc---ccccC---CceEEEEccCCCHHHHHHhhcCccEEEEc-C
Q 029118 101 AVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKR-NA---MESFG---TYVESMAGDASNKKFLKTALRGVRSIICP-S 171 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~-G~~VralvR~~~-~a---~~~~g---~~vevV~GDl~D~~sL~~AL~GvDaVIh~-a 171 (198)
+|.|.||||++|+.+++.|.+. ..++..++.+.. .. ...++ ...+...-+ .|.+ .+.++|.||++ .
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~Dvvf~a~~ 75 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED-ADPE----ELSDVDVVFLALP 75 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE-TSGH----HHTTESEEEE-SC
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEee-cchh----HhhcCCEEEecCc
Confidence 6899999999999999988874 346666654443 21 11111 112222223 3433 35899999998 3
Q ss_pred hhH---HHHHHHhCCCCeEEEEcc
Q 029118 172 EGF---ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 172 ~G~---lldAA~~~GVkRiV~vSS 192 (198)
.+. +...+.++|+ ++|=+|+
T Consensus 76 ~~~~~~~~~~~~~~g~-~ViD~s~ 98 (121)
T PF01118_consen 76 HGASKELAPKLLKAGI-KVIDLSG 98 (121)
T ss_dssp HHHHHHHHHHHHHTTS-EEEESSS
T ss_pred hhHHHHHHHHHhhCCc-EEEeCCH
Confidence 332 6666778888 5554444
|
This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C .... |
| >PRK10669 putative cation:proton antiport protein; Provisional | Back alignment and domain information |
|---|
Probab=97.90 E-value=7.5e-05 Score=71.12 Aligned_cols=71 Identities=14% Similarity=0.222 Sum_probs=60.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHh-hcCccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~A-L~GvDaVIh~ 170 (198)
+..|+|.| .|.+|++++++|.++|++|.++.+|+++.......+..++.||.+|++.+++| ++.+|+|+.+
T Consensus 417 ~~hiiI~G-~G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~~g~~~i~GD~~~~~~L~~a~i~~a~~viv~ 488 (558)
T PRK10669 417 CNHALLVG-YGRVGSLLGEKLLAAGIPLVVIETSRTRVDELRERGIRAVLGNAANEEIMQLAHLDCARWLLLT 488 (558)
T ss_pred CCCEEEEC-CChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCeEEEcCCCCHHHHHhcCccccCEEEEE
Confidence 46788887 58899999999999999999999998776544445689999999999999976 5788988876
|
|
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.86 E-value=4e-05 Score=68.08 Aligned_cols=85 Identities=14% Similarity=0.173 Sum_probs=64.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC--cEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCc--cEEEEcC---
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGV--RSIICPS--- 171 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~--~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~Gv--DaVIh~a--- 171 (198)
.++|||||+||.+|+++++.+.++|. +=.++. .--..|+++.+..++.++-. ..|||.+
T Consensus 1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~--------------~skd~DLt~~a~t~~lF~~ekPthVIhlAAmV 66 (315)
T KOG1431|consen 1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFI--------------GSKDADLTNLADTRALFESEKPTHVIHLAAMV 66 (315)
T ss_pred CceEEEecCCchHHHHHHHHHHhcCCCCcceEEe--------------ccccccccchHHHHHHHhccCCceeeehHhhh
Confidence 36899999999999999999988876 222221 11235788888888888654 6888872
Q ss_pred --------------------hhHHHHHHHhCCCCeEEEEcccceec
Q 029118 172 --------------------EGFISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 --------------------~G~lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
..+++..|.++||+++|+.-|..+|.
T Consensus 67 GGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfP 112 (315)
T KOG1431|consen 67 GGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFP 112 (315)
T ss_pred cchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecC
Confidence 11278899999999999998888764
|
|
| >PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated | Back alignment and domain information |
|---|
Probab=97.86 E-value=6.5e-05 Score=68.02 Aligned_cols=91 Identities=14% Similarity=0.050 Sum_probs=57.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHC-CCcEEEEEeCCcccccc--cCCceEEE-EccCCCHHHHHHhhcCccEEEEc-Chh
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMES--FGTYVESM-AGDASNKKFLKTALRGVRSIICP-SEG 173 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~-G~~VralvR~~~~a~~~--~g~~vevV-~GDl~D~~sL~~AL~GvDaVIh~-a~G 173 (198)
+++|+|.||||++|+.+++.|.+. ++++.+++++.+..... ..+.+..+ ..++.+.+.. ++.++|+||++ ..+
T Consensus 2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~--~~~~vD~Vf~alP~~ 79 (343)
T PRK00436 2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSDVHPHLRGLVDLVLEPLDPE--ILAGADVVFLALPHG 79 (343)
T ss_pred CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccCcchHHhCcccccccCceeecCCHH--HhcCCCEEEECCCcH
Confidence 468999999999999999999876 67888888743322111 01111111 2234444332 56889999987 222
Q ss_pred ---HHHHHHHhCCCCeEEEEcc
Q 029118 174 ---FISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 174 ---~lldAA~~~GVkRiV~vSS 192 (198)
.++.++.++| +++|=+|+
T Consensus 80 ~~~~~v~~a~~aG-~~VID~S~ 100 (343)
T PRK00436 80 VSMDLAPQLLEAG-VKVIDLSA 100 (343)
T ss_pred HHHHHHHHHHhCC-CEEEECCc
Confidence 2666666666 57776665
|
|
| >PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional | Back alignment and domain information |
|---|
Probab=97.86 E-value=8.3e-05 Score=71.98 Aligned_cols=71 Identities=20% Similarity=0.241 Sum_probs=61.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHh-hcCccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~A-L~GvDaVIh~ 170 (198)
++.|+|.| -|.+|+++++.|.++|+++.++.+|++........+..++.||.+|++.+++| ++.+|+||.+
T Consensus 400 ~~~vII~G-~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vv~~ 471 (601)
T PRK03659 400 KPQVIIVG-FGRFGQVIGRLLMANKMRITVLERDISAVNLMRKYGYKVYYGDATQLELLRAAGAEKAEAIVIT 471 (601)
T ss_pred cCCEEEec-CchHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhCCCeEEEeeCCCHHHHHhcCCccCCEEEEE
Confidence 56788887 79999999999999999999999998876544445688999999999999987 6889999987
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.00015 Score=64.63 Aligned_cols=35 Identities=11% Similarity=0.042 Sum_probs=31.8
Q ss_pred CCCCeEEEEcC--CChHHHHHHHHHHHCCCcEEEEEeC
Q 029118 97 EARDAVLVTDG--DSDIGQMVILSLIVKRTRIKALVKD 132 (198)
Q Consensus 97 ~~~~~ILVTGA--TGfIG~~Vvr~Ll~~G~~VralvR~ 132 (198)
..++++||||| +.-||..+++.|.++|++|.+ +|+
T Consensus 7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~ 43 (303)
T PLN02730 7 LRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTW 43 (303)
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeC
Confidence 66889999999 899999999999999999988 664
|
|
| >TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form | Back alignment and domain information |
|---|
Probab=97.84 E-value=6.5e-05 Score=68.18 Aligned_cols=90 Identities=13% Similarity=0.086 Sum_probs=55.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHHC-CCcEEEE-EeCCcccc---cccCCceEEE-EccCCCHHHHHHhhcCccEEEEc-Ch
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVK-RTRIKAL-VKDKRNAM---ESFGTYVESM-AGDASNKKFLKTALRGVRSIICP-SE 172 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~-G~~Vral-vR~~~~a~---~~~g~~vevV-~GDl~D~~sL~~AL~GvDaVIh~-a~ 172 (198)
++|.|.||||++|+.+++.|... +++++++ +++....+ ..++ .++.. ..++.+. ...+.+.++|+||++ ..
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~~~~-~l~~~~~~~~~~~-~~~~~~~~~DvVf~alP~ 78 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPVSEVHP-HLRGLVDLNLEPI-DEEEIAEDADVVFLALPH 78 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCChHHhCc-cccccCCceeecC-CHHHhhcCCCEEEECCCc
Confidence 47999999999999999999875 6788865 43332211 1122 11111 1112211 223344689999988 33
Q ss_pred hH---HHHHHHhCCCCeEEEEcc
Q 029118 173 GF---ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 173 G~---lldAA~~~GVkRiV~vSS 192 (198)
+. ++.++.++| .++|=+|+
T Consensus 79 ~~s~~~~~~~~~~G-~~VIDlS~ 100 (346)
T TIGR01850 79 GVSAELAPELLAAG-VKVIDLSA 100 (346)
T ss_pred hHHHHHHHHHHhCC-CEEEeCCh
Confidence 32 666666777 78887776
|
This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons. |
| >KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00013 Score=66.69 Aligned_cols=73 Identities=15% Similarity=0.288 Sum_probs=59.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc---cC-----CceEEEEccCCCHHHHHHhhcCc-----
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG-----TYVESMAGDASNKKFLKTALRGV----- 164 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~---~g-----~~vevV~GDl~D~~sL~~AL~Gv----- 164 (198)
++..|+|||++..+|..++..+..+|++|+++.|+.++..+. +. ..+.+..+|+.|.+++..++++.
T Consensus 32 ~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~ 111 (331)
T KOG1210|consen 32 PRRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEG 111 (331)
T ss_pred ccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccC
Confidence 447899999999999999999999999999999998764322 11 12558889999999988887543
Q ss_pred --cEEEEc
Q 029118 165 --RSIICP 170 (198)
Q Consensus 165 --DaVIh~ 170 (198)
|.+|||
T Consensus 112 ~~d~l~~c 119 (331)
T KOG1210|consen 112 PIDNLFCC 119 (331)
T ss_pred CcceEEEe
Confidence 888887
|
|
| >KOG2733 consensus Uncharacterized membrane protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.76 E-value=3.8e-05 Score=71.40 Aligned_cols=88 Identities=17% Similarity=0.257 Sum_probs=69.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHH----CCCcEEEEEeCCcccccc-----------cCCceEEEEccCCCHHHHHHhhcC
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIV----KRTRIKALVKDKRNAMES-----------FGTYVESMAGDASNKKFLKTALRG 163 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~----~G~~VralvR~~~~a~~~-----------~g~~vevV~GDl~D~~sL~~AL~G 163 (198)
+--+.|-|||||+|..++++++. .|...-+..||+++..+. +...+ ++..|..|+++|.+-.+-
T Consensus 5 ~yDvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~-i~i~D~~n~~Sl~emak~ 83 (423)
T KOG2733|consen 5 RYDVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSV-ILIADSANEASLDEMAKQ 83 (423)
T ss_pred eeeEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccce-EEEecCCCHHHHHHHHhh
Confidence 34589999999999999999998 788888888998765321 12234 899999999999999999
Q ss_pred ccEEEEcC-----hh-HHHHHHHhCCCCeE
Q 029118 164 VRSIICPS-----EG-FISNAGSLKGVQHV 187 (198)
Q Consensus 164 vDaVIh~a-----~G-~lldAA~~~GVkRi 187 (198)
+..|++|. .| .++.||.++|..|+
T Consensus 84 ~~vivN~vGPyR~hGE~VVkacienG~~~v 113 (423)
T KOG2733|consen 84 ARVIVNCVGPYRFHGEPVVKACIENGTHHV 113 (423)
T ss_pred hEEEEeccccceecCcHHHHHHHHcCCcee
Confidence 99999882 23 37777777776553
|
|
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.0005 Score=60.49 Aligned_cols=75 Identities=20% Similarity=0.238 Sum_probs=60.3
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc---------cCCceEEEEccCCCHHHHHHhh-----
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---------FGTYVESMAGDASNKKFLKTAL----- 161 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~---------~g~~vevV~GDl~D~~sL~~AL----- 161 (198)
....+.++||||+.-||+.++++|...|.+|....|+.+...+. -+..+..+..|+++.+..++++
T Consensus 5 ~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~ 84 (270)
T KOG0725|consen 5 RLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVE 84 (270)
T ss_pred cCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999987653211 1345889999999988766665
Q ss_pred ---cCccEEEEc
Q 029118 162 ---RGVRSIICP 170 (198)
Q Consensus 162 ---~GvDaVIh~ 170 (198)
-..|.+|+.
T Consensus 85 ~~~GkidiLvnn 96 (270)
T KOG0725|consen 85 KFFGKIDILVNN 96 (270)
T ss_pred HhCCCCCEEEEc
Confidence 237888876
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00045 Score=62.50 Aligned_cols=98 Identities=15% Similarity=0.212 Sum_probs=75.5
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc----c--cCCceEEEEccCCCHHHHHHhh-------c
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME----S--FGTYVESMAGDASNKKFLKTAL-------R 162 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~----~--~g~~vevV~GDl~D~~sL~~AL-------~ 162 (198)
+..+..||||||.+.+|+.++.++.++|.++.+.+.|.+...+ . .| .+.....|++|++.+.+.. .
T Consensus 35 ~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis~~eei~~~a~~Vk~e~G 113 (300)
T KOG1201|consen 35 SVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG-EAKAYTCDISDREEIYRLAKKVKKEVG 113 (300)
T ss_pred hccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcC-ceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence 3457789999999999999999999999988888888765321 1 13 5889999999988876554 4
Q ss_pred CccEEEEcC------------------------hh------HHHHHHHhCCCCeEEEEcccc
Q 029118 163 GVRSIICPS------------------------EG------FISNAGSLKGVQHVILLSQGA 194 (198)
Q Consensus 163 GvDaVIh~a------------------------~G------~lldAA~~~GVkRiV~vSS~~ 194 (198)
.++.+|+.+ .+ .++..+.+..=.|||-++|+.
T Consensus 114 ~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~a 175 (300)
T KOG1201|consen 114 DVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVA 175 (300)
T ss_pred CceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhh
Confidence 678888752 01 156777888889999999863
|
|
| >PLN02383 aspartate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00035 Score=63.73 Aligned_cols=87 Identities=13% Similarity=0.125 Sum_probs=54.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEE---E--eCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc-C
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKAL---V--KDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-S 171 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~Vral---v--R~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~-a 171 (198)
...+|+|.||||++|+.+++.|.+++|++.-+ . |+..+.... . +.+++..++. .++++++|+||.+ .
T Consensus 6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~~-~-~~~~~v~~~~-----~~~~~~~D~vf~a~p 78 (344)
T PLN02383 6 NGPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKVTF-E-GRDYTVEELT-----EDSFDGVDIALFSAG 78 (344)
T ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCeeee-c-CceeEEEeCC-----HHHHcCCCEEEECCC
Confidence 35689999999999999999999888864444 2 332222111 1 2444444443 2356799999987 3
Q ss_pred hhH---HHHHHHhCCCCeEEEEcc
Q 029118 172 EGF---ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 172 ~G~---lldAA~~~GVkRiV~vSS 192 (198)
.+. +...+.++|+ ++|=+|+
T Consensus 79 ~~~s~~~~~~~~~~g~-~VIDlS~ 101 (344)
T PLN02383 79 GSISKKFGPIAVDKGA-VVVDNSS 101 (344)
T ss_pred cHHHHHHHHHHHhCCC-EEEECCc
Confidence 333 5555555664 4554554
|
|
| >PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00021 Score=64.74 Aligned_cols=89 Identities=16% Similarity=0.148 Sum_probs=55.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcccccccCCceEE------------EEccCCCHHHHHHhhcCcc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVES------------MAGDASNKKFLKTALRGVR 165 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~~~~g~~vev------------V~GDl~D~~sL~~AL~GvD 165 (198)
+.+|+|+||||++|+++++.|..... ++++++++.+...........+ +...-.+++. ++++|
T Consensus 3 ~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~~~~G~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~D 78 (349)
T PRK08664 3 KLKVGILGATGMVGQRFVQLLANHPWFEVTALAASERSAGKTYGEAVRWQLDGPIPEEVADMEVVSTDPEA----VDDVD 78 (349)
T ss_pred CcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcChhhcCCcccccccccccccccccccceEEEeCCHHH----hcCCC
Confidence 46899999999999999999987644 8888866654332111100000 1111123433 46899
Q ss_pred EEEEc-ChhH---HHHHHHhCCCCeEEEEc
Q 029118 166 SIICP-SEGF---ISNAGSLKGVQHVILLS 191 (198)
Q Consensus 166 aVIh~-a~G~---lldAA~~~GVkRiV~vS 191 (198)
.||.+ ..+. +++++.++|++.|.+.+
T Consensus 79 vVf~a~p~~~s~~~~~~~~~~G~~vIDls~ 108 (349)
T PRK08664 79 IVFSALPSDVAGEVEEEFAKAGKPVFSNAS 108 (349)
T ss_pred EEEEeCChhHHHHHHHHHHHCCCEEEECCc
Confidence 99876 3332 66777788987655544
|
|
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00017 Score=63.79 Aligned_cols=73 Identities=8% Similarity=0.064 Sum_probs=57.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCc-EEEEEeCC---cccccc---c---CCceEEEEccCCCHHHHHHhhcCccE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDK---RNAMES---F---GTYVESMAGDASNKKFLKTALRGVRS 166 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~-VralvR~~---~~a~~~---~---g~~vevV~GDl~D~~sL~~AL~GvDa 166 (198)
..+++++|||| |.+|+.++..|...|++ |.++.|+. +++.+. + ...+.+...|+.|.+.+.++++.+|.
T Consensus 124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~Di 202 (289)
T PRK12548 124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDI 202 (289)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCE
Confidence 34578999999 89999999999999987 99999986 343221 1 12355667899999899889999999
Q ss_pred EEEc
Q 029118 167 IICP 170 (198)
Q Consensus 167 VIh~ 170 (198)
||++
T Consensus 203 lINa 206 (289)
T PRK12548 203 LVNA 206 (289)
T ss_pred EEEe
Confidence 9986
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00035 Score=61.09 Aligned_cols=73 Identities=12% Similarity=0.208 Sum_probs=59.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc--cCCceEEEEccCCCHHHHHHhh-------cCccEEE
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--FGTYVESMAGDASNKKFLKTAL-------RGVRSII 168 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~--~g~~vevV~GDl~D~~sL~~AL-------~GvDaVI 168 (198)
.+.+||||||+..||..+++++.+.|-+|.+..|+.++..+. ..+.+.-++.|+.|.++.++.+ -..+.+|
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvli 83 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLI 83 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchheee
Confidence 456899999999999999999999999999999998765432 2356778899999988666554 3568888
Q ss_pred Ec
Q 029118 169 CP 170 (198)
Q Consensus 169 h~ 170 (198)
.+
T Consensus 84 NN 85 (245)
T COG3967 84 NN 85 (245)
T ss_pred ec
Confidence 76
|
|
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00031 Score=63.25 Aligned_cols=100 Identities=13% Similarity=0.149 Sum_probs=71.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc------------cccCCceEEEEccCCCHHHHHHhhcCc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM------------ESFGTYVESMAGDASNKKFLKTALRGV 164 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~------------~~~g~~vevV~GDl~D~~sL~~AL~Gv 164 (198)
.+++.-||||=||.=|++++..|+.+||+|+.+.|..+.-. ...+.......||++|...|.+.+.-+
T Consensus 26 r~rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i 105 (376)
T KOG1372|consen 26 RPRKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI 105 (376)
T ss_pred ccceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc
Confidence 34567899999999999999999999999999999764311 112245788999999999999987544
Q ss_pred --cEEEEc-C-------------------hhH--HHHHHHhCCCC---eEEEEccccee
Q 029118 165 --RSIICP-S-------------------EGF--ISNAGSLKGVQ---HVILLSQGAVV 196 (198)
Q Consensus 165 --DaVIh~-a-------------------~G~--lldAA~~~GVk---RiV~vSS~~Vy 196 (198)
+-|+|. + .|+ +++|.+.+++. ||--.|+...|
T Consensus 106 kPtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSEly 164 (376)
T KOG1372|consen 106 KPTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELY 164 (376)
T ss_pred CchhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhc
Confidence 344443 1 344 78888877653 33334555444
|
|
| >PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00011 Score=64.81 Aligned_cols=97 Identities=12% Similarity=0.095 Sum_probs=61.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-----------cCCce------EEEEccCCCHHHHHHhh
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----------FGTYV------ESMAGDASNKKFLKTAL 161 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-----------~g~~v------evV~GDl~D~~sL~~AL 161 (198)
.++|.|+| .|.+|..++..|+.+|++|++..|+++..... ...+. +.....+.-..++.+++
T Consensus 2 ~~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~~~~~~~a~ 80 (308)
T PRK06129 2 MGSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRVTDSLADAV 80 (308)
T ss_pred CcEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEEECcHHHhh
Confidence 45799999 99999999999999999999999987543210 00000 00000111112566788
Q ss_pred cCccEEEEc-Chh--H---HHHHHHhCCCCeEEEEccccee
Q 029118 162 RGVRSIICP-SEG--F---ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 162 ~GvDaVIh~-a~G--~---lldAA~~~GVkRiV~vSS~~Vy 196 (198)
+++|.||.+ .+. . ++.......-.++++.||...+
T Consensus 81 ~~ad~Vi~avpe~~~~k~~~~~~l~~~~~~~~ii~ssts~~ 121 (308)
T PRK06129 81 ADADYVQESAPENLELKRALFAELDALAPPHAILASSTSAL 121 (308)
T ss_pred CCCCEEEECCcCCHHHHHHHHHHHHHhCCCcceEEEeCCCC
Confidence 999999987 211 1 4444444445566777776543
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00017 Score=60.53 Aligned_cols=77 Identities=9% Similarity=0.055 Sum_probs=57.2
Q ss_pred HHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc----CccEEEEcC----------------hhH
Q 029118 115 VILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR----GVRSIICPS----------------EGF 174 (198)
Q Consensus 115 Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~----GvDaVIh~a----------------~G~ 174 (198)
++++|+++|++|.++.|+.++.. ..+++++|++|.+++.++++ ++|.|||++ .++
T Consensus 1 ~a~~l~~~G~~Vv~~~r~~~~~~-----~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~~~~~~~~~vN~~~~ 75 (241)
T PRK12428 1 TARLLRFLGARVIGVDRREPGMT-----LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGTAPVELVARVNFLGL 75 (241)
T ss_pred ChHHHHhCCCEEEEEeCCcchhh-----hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCCCCHHHhhhhchHHH
Confidence 46889999999999999876531 24678999999999998886 589999982 111
Q ss_pred --HHHHHHhC--CCCeEEEEccccee
Q 029118 175 --ISNAGSLK--GVQHVILLSQGAVV 196 (198)
Q Consensus 175 --lldAA~~~--GVkRiV~vSS~~Vy 196 (198)
+++++... .-.+||++||.+.|
T Consensus 76 ~~l~~~~~~~~~~~g~Iv~isS~~~~ 101 (241)
T PRK12428 76 RHLTEALLPRMAPGGAIVNVASLAGA 101 (241)
T ss_pred HHHHHHHHHhccCCcEEEEeCcHHhh
Confidence 44444321 22699999998765
|
|
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00032 Score=65.30 Aligned_cols=69 Identities=13% Similarity=0.059 Sum_probs=55.7
Q ss_pred CCCCeEEEEcC----------------CChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHh
Q 029118 97 EARDAVLVTDG----------------DSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA 160 (198)
Q Consensus 97 ~~~~~ILVTGA----------------TGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~A 160 (198)
..++++||||| +|.+|.+++++|..+|++|.++.++... . .+.+ +...|+++.+++.++
T Consensus 186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~-~--~~~~--~~~~dv~~~~~~~~~ 260 (399)
T PRK05579 186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNL-P--TPAG--VKRIDVESAQEMLDA 260 (399)
T ss_pred cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCccc-c--CCCC--cEEEccCCHHHHHHH
Confidence 56789999999 9999999999999999999999887532 1 1222 345699998888877
Q ss_pred h----cCccEEEEc
Q 029118 161 L----RGVRSIICP 170 (198)
Q Consensus 161 L----~GvDaVIh~ 170 (198)
+ ..+|.+||+
T Consensus 261 v~~~~~~~DilI~~ 274 (399)
T PRK05579 261 VLAALPQADIFIMA 274 (399)
T ss_pred HHHhcCCCCEEEEc
Confidence 7 468999998
|
|
| >PRK00048 dihydrodipicolinate reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00096 Score=58.03 Aligned_cols=82 Identities=17% Similarity=0.081 Sum_probs=54.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHH-CCCcEEEEE-eCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc-C-hh--
Q 029118 100 DAVLVTDGDSDIGQMVILSLIV-KRTRIKALV-KDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-S-EG-- 173 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~-~G~~Vralv-R~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~-a-~G-- 173 (198)
++|.|+|++|.+|+.+++.+.+ .+.++.+++ ++++..... -..++...+.++++++++|+||.+ . ..
T Consensus 2 mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~-------~~~~i~~~~dl~~ll~~~DvVid~t~p~~~~ 74 (257)
T PRK00048 2 IKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ-------GALGVAITDDLEAVLADADVLIDFTTPEATL 74 (257)
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc-------CCCCccccCCHHHhccCCCEEEECCCHHHHH
Confidence 6899999999999999988876 478888866 444433211 112333344566677789999966 2 12
Q ss_pred HHHHHHHhCCCCeEE
Q 029118 174 FISNAGSLKGVQHVI 188 (198)
Q Consensus 174 ~lldAA~~~GVkRiV 188 (198)
.++.+|.++|+.=++
T Consensus 75 ~~~~~al~~G~~vvi 89 (257)
T PRK00048 75 ENLEFALEHGKPLVI 89 (257)
T ss_pred HHHHHHHHcCCCEEE
Confidence 267777788854443
|
|
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.00062 Score=60.47 Aligned_cols=94 Identities=9% Similarity=0.043 Sum_probs=65.6
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC----
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS---- 171 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a---- 171 (198)
+..+++++|+|+ |.+|+.+++.|...|.+|.+..|++++.......+.+.+ +.+.+.+.++++|.||++.
T Consensus 148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~~g~~~~-----~~~~l~~~l~~aDiVint~P~~i 221 (287)
T TIGR02853 148 TIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARITEMGLIPF-----PLNKLEEKVAEIDIVINTIPALV 221 (287)
T ss_pred CCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeee-----cHHHHHHHhccCCEEEECCChHH
Confidence 445789999998 889999999999999999999998765432221122322 2346778889999999751
Q ss_pred ----------------------hhHHHHHHHhCCCCeEEEEcccce
Q 029118 172 ----------------------EGFISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 172 ----------------------~G~lldAA~~~GVkRiV~vSS~~V 195 (198)
.++=.++|++.|++.+..-+-.+.
T Consensus 222 i~~~~l~~~k~~aliIDlas~Pg~tdf~~Ak~~G~~a~~~~glPg~ 267 (287)
T TIGR02853 222 LTADVLSKLPKHAVIIDLASKPGGTDFEYAKKRGIKALLAPGLPGI 267 (287)
T ss_pred hCHHHHhcCCCCeEEEEeCcCCCCCCHHHHHHCCCEEEEeCCCCcc
Confidence 011127888888888765554443
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00029 Score=60.66 Aligned_cols=70 Identities=26% Similarity=0.293 Sum_probs=59.2
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc---cCCceEEEEccCCCHHHHHHhhcCc
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALRGV 164 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~---~g~~vevV~GDl~D~~sL~~AL~Gv 164 (198)
....+..|+||||--.||+.++.+|...|.+|.++.|+++....+ -+.-++.+++|+.+-+.+.+++..+
T Consensus 3 t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v 75 (245)
T KOG1207|consen 3 TSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPV 75 (245)
T ss_pred ccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhccc
Confidence 355778999999999999999999999999999999998765432 2334899999999999999998644
|
|
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00075 Score=63.20 Aligned_cols=72 Identities=18% Similarity=0.252 Sum_probs=55.4
Q ss_pred CCCeEEEEcCCChHHHH--HHHHHHHCCCcEEEEEeCCcc---------------cc---cccCCceEEEEccCCCHHHH
Q 029118 98 ARDAVLVTDGDSDIGQM--VILSLIVKRTRIKALVKDKRN---------------AM---ESFGTYVESMAGDASNKKFL 157 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~--Vvr~Ll~~G~~VralvR~~~~---------------a~---~~~g~~vevV~GDl~D~~sL 157 (198)
.++++|||||++.+|.. +++.| .+|.+|.++.+..++ .. ...+..+..+.+|+++++.+
T Consensus 40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v 118 (398)
T PRK13656 40 GPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIK 118 (398)
T ss_pred CCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHH
Confidence 35799999999999999 89999 999999988853211 11 12244567889999999888
Q ss_pred HHhh-------cCccEEEEc
Q 029118 158 KTAL-------RGVRSIICP 170 (198)
Q Consensus 158 ~~AL-------~GvDaVIh~ 170 (198)
.+++ ..+|.+||.
T Consensus 119 ~~lie~I~e~~G~IDiLVnS 138 (398)
T PRK13656 119 QKVIELIKQDLGQVDLVVYS 138 (398)
T ss_pred HHHHHHHHHhcCCCCEEEEC
Confidence 7765 368999997
|
|
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00071 Score=62.02 Aligned_cols=81 Identities=16% Similarity=0.105 Sum_probs=58.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc-c----ccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC-
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-A----MESFGTYVESMAGDASNKKFLKTALRGVRSIICPS- 171 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~-a----~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a- 171 (198)
..++++|+|+.+ +|..+++.|+++|++|.+..++... . .+....+++++.+|..| ..+.++|.||.+.
T Consensus 4 ~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~~~~~d~vv~~~g 77 (450)
T PRK14106 4 KGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVLGEYPE-----EFLEGVDLVVVSPG 77 (450)
T ss_pred CCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcch-----hHhhcCCEEEECCC
Confidence 467899999988 9999999999999999999887522 2 11112357888888876 3457899999872
Q ss_pred --hh-HHHHHHHhCCC
Q 029118 172 --EG-FISNAGSLKGV 184 (198)
Q Consensus 172 --~G-~lldAA~~~GV 184 (198)
.. -.+.+|++.|+
T Consensus 78 ~~~~~~~~~~a~~~~i 93 (450)
T PRK14106 78 VPLDSPPVVQAHKKGI 93 (450)
T ss_pred CCCCCHHHHHHHHCCC
Confidence 11 15555565554
|
|
| >cd00704 MDH Malate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.00045 Score=62.45 Aligned_cols=64 Identities=16% Similarity=0.134 Sum_probs=46.5
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCC-------cEEEEEeCCcccccccCCceEEEEccCCCH-----------HHHHHhhc
Q 029118 101 AVLVTDGDSDIGQMVILSLIVKRT-------RIKALVKDKRNAMESFGTYVESMAGDASNK-----------KFLKTALR 162 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~G~-------~VralvR~~~~a~~~~g~~vevV~GDl~D~-----------~sL~~AL~ 162 (198)
+|.||||+|++|++++..|..++. +++.+++++.. +..+....|+.|. ....++++
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~------~~~~g~~~Dl~d~~~~~~~~~~i~~~~~~~~~ 75 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAM------KALEGVVMELQDCAFPLLKGVVITTDPEEAFK 75 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCcc------CccceeeeehhhhcccccCCcEEecChHHHhC
Confidence 799999999999999998887652 58888776510 1123334444444 35678999
Q ss_pred CccEEEEc
Q 029118 163 GVRSIICP 170 (198)
Q Consensus 163 GvDaVIh~ 170 (198)
|+|.|||+
T Consensus 76 ~aDiVVit 83 (323)
T cd00704 76 DVDVAILV 83 (323)
T ss_pred CCCEEEEe
Confidence 99999998
|
Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.00085 Score=65.38 Aligned_cols=71 Identities=18% Similarity=0.206 Sum_probs=59.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHh-hcCccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~A-L~GvDaVIh~ 170 (198)
.+.|+|.| -|.+|+.+++.|.++|++++++.+|+++.......+..++.||.+|++.+++| ++.+++||.+
T Consensus 400 ~~~vII~G-~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vvv~ 471 (621)
T PRK03562 400 QPRVIIAG-FGRFGQIVGRLLLSSGVKMTVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINA 471 (621)
T ss_pred cCcEEEEe-cChHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhcCCeEEEEeCCCHHHHHhcCCCcCCEEEEE
Confidence 46788877 58899999999999999999999998876544345688999999999999865 5788999987
|
|
| >COG3268 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00029 Score=65.02 Aligned_cols=85 Identities=12% Similarity=0.062 Sum_probs=64.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc---cccCCceEEEEccCCCHHHHHHhhcCccEEEEcC----
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALRGVRSIICPS---- 171 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~---~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a---- 171 (198)
...++|-|||||.|..++++|..+|++-..-.||..+.. ..+++ +.-...+.+|+.+++.+.+++.|++|.
T Consensus 6 e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~--~~~~~p~~~p~~~~~~~~~~~VVlncvGPyt 83 (382)
T COG3268 6 EYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGP--EAAVFPLGVPAALEAMASRTQVVLNCVGPYT 83 (382)
T ss_pred ceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCc--cccccCCCCHHHHHHHHhcceEEEecccccc
Confidence 346899999999999999999999999966678887653 33454 444455666999999999999999982
Q ss_pred -hhH-HHHHHHhCCCC
Q 029118 172 -EGF-ISNAGSLKGVQ 185 (198)
Q Consensus 172 -~G~-lldAA~~~GVk 185 (198)
.|. ++++|..+|+.
T Consensus 84 ~~g~plv~aC~~~GTd 99 (382)
T COG3268 84 RYGEPLVAACAAAGTD 99 (382)
T ss_pred ccccHHHHHHHHhCCC
Confidence 232 66666666653
|
|
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.00066 Score=52.89 Aligned_cols=85 Identities=15% Similarity=0.085 Sum_probs=53.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHH-CCCcEEEEEeCCc-ccc-----ccc---CCceEEEEccCCCHHHHHHhhcCccEEEE
Q 029118 100 DAVLVTDGDSDIGQMVILSLIV-KRTRIKALVKDKR-NAM-----ESF---GTYVESMAGDASNKKFLKTALRGVRSIIC 169 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~-~G~~VralvR~~~-~a~-----~~~---g~~vevV~GDl~D~~sL~~AL~GvDaVIh 169 (198)
++|.|.|++|.+|+.+++.+.+ .++++.+.+.... ... ... ..++.+ .+.++++++.+|.||.
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v-------~~~l~~~~~~~DVvID 73 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPV-------TDDLEELLEEADVVID 73 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBE-------BS-HHHHTTH-SEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCccccc-------chhHHHhcccCCEEEE
Confidence 4799999999999999999999 7889777764333 110 000 111111 1466777877999987
Q ss_pred cC--hhH--HHHHHHhCCCCeEEEEc
Q 029118 170 PS--EGF--ISNAGSLKGVQHVILLS 191 (198)
Q Consensus 170 ~a--~G~--lldAA~~~GVkRiV~vS 191 (198)
.. ... .++.|.++|+.-++-++
T Consensus 74 fT~p~~~~~~~~~~~~~g~~~ViGTT 99 (124)
T PF01113_consen 74 FTNPDAVYDNLEYALKHGVPLVIGTT 99 (124)
T ss_dssp ES-HHHHHHHHHHHHHHT-EEEEE-S
T ss_pred cCChHHhHHHHHHHHhCCCCEEEECC
Confidence 62 222 67777788877766554
|
In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A .... |
| >TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.00072 Score=61.09 Aligned_cols=87 Identities=15% Similarity=0.125 Sum_probs=52.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC-CcEEEEEeCCcccccccCCc-------------eEEEEccCCCHHHHHHhhcCcc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGTY-------------VESMAGDASNKKFLKTALRGVR 165 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G-~~VralvR~~~~a~~~~g~~-------------vevV~GDl~D~~sL~~AL~GvD 165 (198)
++|+|+||||++|+++++.|..+. .+|.+++++........... .+...-++ +++ .++++|
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~D 75 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVASPRSAGKRYGEAVKWIEPGDMPEYVRDLPIVEP-EPV----ASKDVD 75 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEEChhhcCCcchhhccccccCCCccccceeEEEeC-CHH----HhccCC
Confidence 379999999999999999888765 68888865442221111100 01111111 222 457899
Q ss_pred EEEEc-ChhH---HHHHHHhCCCCeEEEEcc
Q 029118 166 SIICP-SEGF---ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 166 aVIh~-a~G~---lldAA~~~GVkRiV~vSS 192 (198)
.|+.+ ..+. +.+++.++|++ +|-+|+
T Consensus 76 vVf~a~p~~~s~~~~~~~~~~G~~-VIDlsg 105 (341)
T TIGR00978 76 IVFSALPSEVAEEVEPKLAEAGKP-VFSNAS 105 (341)
T ss_pred EEEEeCCHHHHHHHHHHHHHCCCE-EEECCh
Confidence 99987 3332 56777778876 444443
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan. |
| >KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.002 Score=56.85 Aligned_cols=63 Identities=16% Similarity=0.241 Sum_probs=49.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHC-CCcE-EEEEeCCcccccc------cCCceEEEEccCCCHHHHHHhhc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVK-RTRI-KALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR 162 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~-G~~V-ralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~AL~ 162 (198)
+.|+||||+-.||--+|++|+.. |.++ .+..|+++++.+. ..+++++++.|+++-+++.++.+
T Consensus 4 ksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~ 74 (249)
T KOG1611|consen 4 KSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQ 74 (249)
T ss_pred ccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHH
Confidence 45999999999999999999974 5544 4556778874211 25789999999999998888863
|
|
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0022 Score=58.35 Aligned_cols=99 Identities=13% Similarity=0.156 Sum_probs=68.3
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCc---------------------ccc------cccCCc--e
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR---------------------NAM------ESFGTY--V 144 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~---------------------~a~------~~~g~~--v 144 (198)
+.....+|+|.|+ |-+|+++++.|...|+ +++++.++.- ++. ....+. +
T Consensus 20 ~~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i 98 (338)
T PRK12475 20 RKIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEI 98 (338)
T ss_pred HhhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEE
Confidence 3566778999997 5699999999999998 6777776641 100 011233 5
Q ss_pred EEEEccCCCHHHHHHhhcCccEEEEcChh-----HHHHHHHhCCCCeEEEEccccee
Q 029118 145 ESMAGDASNKKFLKTALRGVRSIICPSEG-----FISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 145 evV~GDl~D~~sL~~AL~GvDaVIh~a~G-----~lldAA~~~GVkRiV~vSS~~Vy 196 (198)
+.+..|++ ++.+.+.++++|.||.+... .+-++|++.++. +|+.+..+.+
T Consensus 99 ~~~~~~~~-~~~~~~~~~~~DlVid~~D~~~~r~~in~~~~~~~ip-~i~~~~~g~~ 153 (338)
T PRK12475 99 VPVVTDVT-VEELEELVKEVDLIIDATDNFDTRLLINDLSQKYNIP-WIYGGCVGSY 153 (338)
T ss_pred EEEeccCC-HHHHHHHhcCCCEEEEcCCCHHHHHHHHHHHHHcCCC-EEEEEecccE
Confidence 56777775 56788899999999988321 155778888865 5666655443
|
|
| >PRK10537 voltage-gated potassium channel; Provisional | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0036 Score=58.23 Aligned_cols=69 Identities=19% Similarity=0.251 Sum_probs=56.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHh-hcCccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~A-L~GvDaVIh~ 170 (198)
++.++|.|. |.+|+.++++|.++|++|.++..+.. ......+..++.||.+|++.|++| ++.+++||.+
T Consensus 240 k~HvII~G~-g~lg~~v~~~L~~~g~~vvVId~d~~--~~~~~~g~~vI~GD~td~e~L~~AgI~~A~aVI~~ 309 (393)
T PRK10537 240 KDHFIICGH-SPLAINTYLGLRQRGQAVTVIVPLGL--EHRLPDDADLIPGDSSDSAVLKKAGAARARAILAL 309 (393)
T ss_pred CCeEEEECC-ChHHHHHHHHHHHCCCCEEEEECchh--hhhccCCCcEEEeCCCCHHHHHhcCcccCCEEEEc
Confidence 457888886 68999999999999999999986532 233445688999999999999976 5889999976
|
|
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.00054 Score=53.94 Aligned_cols=71 Identities=21% Similarity=0.274 Sum_probs=54.8
Q ss_pred cccCCCCeEEEEcCCChHHHHHHHHHHHCCCc-EEEEEeCCcccccc---c-CCceEEEEccCCCHHHHHHhhcCccEEE
Q 029118 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNAMES---F-GTYVESMAGDASNKKFLKTALRGVRSII 168 (198)
Q Consensus 94 ~~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~-VralvR~~~~a~~~---~-g~~vevV~GDl~D~~sL~~AL~GvDaVI 168 (198)
+.+...++++|.|| |.+|+.++..|...|.+ |.++.|+.+++... + +..++++..+ .+.+++..+|.||
T Consensus 7 ~~~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~-----~~~~~~~~~DivI 80 (135)
T PF01488_consen 7 FGDLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLE-----DLEEALQEADIVI 80 (135)
T ss_dssp HSTGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGG-----GHCHHHHTESEEE
T ss_pred cCCcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHH-----HHHHHHhhCCeEE
Confidence 45677889999998 88999999999999987 99999998776432 3 2235555443 4557889999999
Q ss_pred Ec
Q 029118 169 CP 170 (198)
Q Consensus 169 h~ 170 (198)
++
T Consensus 81 ~a 82 (135)
T PF01488_consen 81 NA 82 (135)
T ss_dssp E-
T ss_pred Ee
Confidence 88
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >TIGR01915 npdG NADPH-dependent F420 reductase | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.00043 Score=58.32 Aligned_cols=65 Identities=18% Similarity=0.125 Sum_probs=47.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCC--------ce--EEEEccCCCHHHHHHhhcCccEEEE
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT--------YV--ESMAGDASNKKFLKTALRGVRSIIC 169 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~--------~v--evV~GDl~D~~sL~~AL~GvDaVIh 169 (198)
|+|.|.||+|.+|+.+++.|.++||+|.+..|++++....... ++ .+... ...++++.+|.||.
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~~~~~~------~~~ea~~~aDvVil 74 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKALEELGHGGSDIKVTGA------DNAEAAKRADVVIL 74 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHHHhhccccCCCceEEEe------ChHHHHhcCCEEEE
Confidence 4799999999999999999999999999999988664322110 11 11111 22567888999998
Q ss_pred c
Q 029118 170 P 170 (198)
Q Consensus 170 ~ 170 (198)
+
T Consensus 75 a 75 (219)
T TIGR01915 75 A 75 (219)
T ss_pred E
Confidence 7
|
This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase. |
| >TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.001 Score=60.13 Aligned_cols=64 Identities=17% Similarity=0.104 Sum_probs=46.6
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCC-------cEEEEEeCCcccccccCCceEEEEccCCCHH-----------HHHHhhc
Q 029118 101 AVLVTDGDSDIGQMVILSLIVKRT-------RIKALVKDKRNAMESFGTYVESMAGDASNKK-----------FLKTALR 162 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~G~-------~VralvR~~~~a~~~~g~~vevV~GDl~D~~-----------sL~~AL~ 162 (198)
+|.|+||+|++|.+++..|+.++. +++.+++++... ..+....|+.|.. ...++++
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~------~a~g~~~Dl~d~~~~~~~~~~~~~~~~~~~~ 74 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK------VLEGVVMELMDCAFPLLDGVVPTHDPAVAFT 74 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc------ccceeEeehhcccchhcCceeccCChHHHhC
Confidence 589999999999999999987553 588888755431 1233444555544 4468999
Q ss_pred CccEEEEc
Q 029118 163 GVRSIICP 170 (198)
Q Consensus 163 GvDaVIh~ 170 (198)
++|.||++
T Consensus 75 ~aDiVVit 82 (324)
T TIGR01758 75 DVDVAILV 82 (324)
T ss_pred CCCEEEEc
Confidence 99999998
|
This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography |
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.00071 Score=56.39 Aligned_cols=65 Identities=12% Similarity=0.142 Sum_probs=51.9
Q ss_pred cCC--ChHHHHHHHHHHHCCCcEEEEEeCCccc----cccc-CCceEEEEccCCCHHHHHHhh--------cCccEEEEc
Q 029118 106 DGD--SDIGQMVILSLIVKRTRIKALVKDKRNA----MESF-GTYVESMAGDASNKKFLKTAL--------RGVRSIICP 170 (198)
Q Consensus 106 GAT--GfIG~~Vvr~Ll~~G~~VralvR~~~~a----~~~~-g~~vevV~GDl~D~~sL~~AL--------~GvDaVIh~ 170 (198)
|++ +-||+.++++|+++|++|.+..|+.++. .+.. ..+.+++..|++|++++.+++ ..+|.+||+
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~ 80 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVNN 80 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEE
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEec
Confidence 666 9999999999999999999999998752 1111 122567999999999988874 567999986
|
... |
| >KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.00099 Score=60.61 Aligned_cols=69 Identities=17% Similarity=0.168 Sum_probs=54.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc-------ccCCceEEEEccCCCHHH----HHHhhcCccEEE
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------SFGTYVESMAGDASNKKF----LKTALRGVRSII 168 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~-------~~g~~vevV~GDl~D~~s----L~~AL~GvDaVI 168 (198)
.=.+|||||..||+..+++|..+|.+|..+.|+.++... ..+-.+.++..|+++++. +++.+.+.|.=|
T Consensus 50 ~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~VgI 129 (312)
T KOG1014|consen 50 SWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDVGI 129 (312)
T ss_pred CEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCceEE
Confidence 457899999999999999999999999999999987531 123347789999988765 777777776443
|
|
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0023 Score=51.68 Aligned_cols=88 Identities=10% Similarity=0.043 Sum_probs=69.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC-----h
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-----E 172 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a-----~ 172 (198)
..++|++.|.. .|.+++..|.+.|++|.++..++..........++++.+|+.+|.. +.-+++|.|+... .
T Consensus 16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~--~~y~~a~liysirpp~el~ 91 (134)
T PRK04148 16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKKLGLNAFVDDLFNPNL--EIYKNAKLIYSIRPPRDLQ 91 (134)
T ss_pred cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHhCCeEEECcCCCCCH--HHHhcCCEEEEeCCCHHHH
Confidence 34679999865 7778899999999999999998876544444468999999998764 3458999998762 3
Q ss_pred hHHHHHHHhCCCCeEEE
Q 029118 173 GFISNAGSLKGVQHVIL 189 (198)
Q Consensus 173 G~lldAA~~~GVkRiV~ 189 (198)
-.+++.|++-++.-+|.
T Consensus 92 ~~~~~la~~~~~~~~i~ 108 (134)
T PRK04148 92 PFILELAKKINVPLIIK 108 (134)
T ss_pred HHHHHHHHHcCCCEEEE
Confidence 34899999999887765
|
|
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0035 Score=54.80 Aligned_cols=74 Identities=20% Similarity=0.207 Sum_probs=57.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc---ccCC--ceEEEEccCCCHHHHHHhhc-------Cc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGT--YVESMAGDASNKKFLKTALR-------GV 164 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~---~~g~--~vevV~GDl~D~~sL~~AL~-------Gv 164 (198)
...+..+||||+..||+++...|..+|++|.+..++...+.+ .++. +--.+.+|+.++.+++..|+ -.
T Consensus 12 ~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~p 91 (256)
T KOG1200|consen 12 LMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTP 91 (256)
T ss_pred HhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCC
Confidence 345678999999999999999999999999999988765432 2332 34568999999988877553 35
Q ss_pred cEEEEc
Q 029118 165 RSIICP 170 (198)
Q Consensus 165 DaVIh~ 170 (198)
+.+++|
T Consensus 92 svlVnc 97 (256)
T KOG1200|consen 92 SVLVNC 97 (256)
T ss_pred cEEEEc
Confidence 777776
|
|
| >PRK08057 cobalt-precorrin-6x reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.006 Score=53.51 Aligned_cols=89 Identities=16% Similarity=0.138 Sum_probs=70.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc--CccEEEEc----C-
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICP----S- 171 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~--GvDaVIh~----a- 171 (198)
+++|||.|||+- |+.+++.|.++|++|.+-+-....... ...++++.|-+.|.+.+.+-++ ++++||-. +
T Consensus 2 ~~~IlvlgGT~e-gr~la~~L~~~g~~v~~Svat~~g~~~--~~~~~v~~G~l~~~~~l~~~l~~~~i~~VIDATHPfA~ 78 (248)
T PRK08057 2 MPRILLLGGTSE-ARALARALAAAGVDIVLSLAGRTGGPA--DLPGPVRVGGFGGAEGLAAYLREEGIDLVIDATHPYAA 78 (248)
T ss_pred CceEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCCCcc--cCCceEEECCCCCHHHHHHHHHHCCCCEEEECCCccHH
Confidence 468999999985 889999999999999998866543322 2457899999999999999995 88999955 2
Q ss_pred --hhHHHHHHHhCCCCeEEEE
Q 029118 172 --EGFISNAGSLKGVQHVILL 190 (198)
Q Consensus 172 --~G~lldAA~~~GVkRiV~v 190 (198)
..+..++|++.|+..+=|.
T Consensus 79 ~is~~a~~ac~~~~ipyiR~e 99 (248)
T PRK08057 79 QISANAAAACRALGIPYLRLE 99 (248)
T ss_pred HHHHHHHHHHHHhCCcEEEEe
Confidence 2348899999988777654
|
|
| >cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0033 Score=53.59 Aligned_cols=91 Identities=16% Similarity=0.095 Sum_probs=56.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCce-EEEEccCCC-HHHHHHhhcCccEEEEcChhH-
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYV-ESMAGDASN-KKFLKTALRGVRSIICPSEGF- 174 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~v-evV~GDl~D-~~sL~~AL~GvDaVIh~a~G~- 174 (198)
+..++||+||+|.+|+.+++.+...|.+|.+++|+++........++ .++ +..+ .+.+.+. .++|.|+++..+.
T Consensus 162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~d~v~~~~g~~~ 238 (332)
T cd08259 162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKELGADYVI--DGSKFSEDVKKL-GGADVVIELVGSPT 238 (332)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCcEEE--ecHHHHHHHHhc-cCCCEEEECCChHH
Confidence 45689999999999999999999999999999987754332211112 222 2221 2233333 3899999873221
Q ss_pred ---HHHHHHhCCCCeEEEEccc
Q 029118 175 ---ISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 175 ---lldAA~~~GVkRiV~vSS~ 193 (198)
.+++.... .++|.++..
T Consensus 239 ~~~~~~~~~~~--g~~v~~g~~ 258 (332)
T cd08259 239 IEESLRSLNKG--GRLVLIGNV 258 (332)
T ss_pred HHHHHHHhhcC--CEEEEEcCC
Confidence 33333333 467776543
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. |
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0079 Score=53.48 Aligned_cols=37 Identities=8% Similarity=-0.056 Sum_probs=31.8
Q ss_pred cCCCCeEEEEcCC--ChHHHHHHHHHHHCCCcEEEEEeC
Q 029118 96 EEARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKD 132 (198)
Q Consensus 96 ~~~~~~ILVTGAT--GfIG~~Vvr~Ll~~G~~VralvR~ 132 (198)
+..+++++||||+ .-||++++++|.++|++|.+..|.
T Consensus 5 ~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~ 43 (299)
T PRK06300 5 DLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWV 43 (299)
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEecc
Confidence 3457899999995 899999999999999999886543
|
|
| >PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0031 Score=57.26 Aligned_cols=68 Identities=15% Similarity=0.195 Sum_probs=55.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEE
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIIC 169 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh 169 (198)
+++|+|.|+ |.+|+.++..+.+.|++|.++..++........ -+.+.+|+.|++.+.+..+.||+|..
T Consensus 2 ~~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~~~~~pa~~~a--d~~~~~~~~D~~~l~~~a~~~dvit~ 69 (372)
T PRK06019 2 MKTIGIIGG-GQLGRMLALAAAPLGYKVIVLDPDPDSPAAQVA--DEVIVADYDDVAALRELAEQCDVITY 69 (372)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchhHhC--ceEEecCCCCHHHHHHHHhcCCEEEe
Confidence 468999998 799999999999999999999876644322222 35677899999999999999998753
|
|
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0011 Score=51.75 Aligned_cols=69 Identities=14% Similarity=0.038 Sum_probs=47.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCC-CcEEEEEeCCcccccccCC-ceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G-~~VralvR~~~~a~~~~g~-~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
..++|+|+|+ |.+|+.+++.|.+.| ++|.+..|++++....... ....+..+..|. .++++++|.||++
T Consensus 18 ~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~Dvvi~~ 88 (155)
T cd01065 18 KGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLDL---EELLAEADLIINT 88 (155)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecch---hhccccCCEEEeC
Confidence 3568999998 999999999999986 7899999987654322110 111112233333 4457899999987
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.007 Score=55.09 Aligned_cols=99 Identities=18% Similarity=0.217 Sum_probs=70.0
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCc---------------------ccc------cccCCc--e
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR---------------------NAM------ESFGTY--V 144 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~---------------------~a~------~~~g~~--v 144 (198)
......+|+|.|+ |.+|++++..|...|. +++++.++.- ++. ..+.+. +
T Consensus 20 ~~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v 98 (339)
T PRK07688 20 QKLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRV 98 (339)
T ss_pred HHhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEE
Confidence 4566788999998 8999999999999998 7888877630 100 111233 4
Q ss_pred EEEEccCCCHHHHHHhhcCccEEEEcC--hh---HHHHHHHhCCCCeEEEEccccee
Q 029118 145 ESMAGDASNKKFLKTALRGVRSIICPS--EG---FISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 145 evV~GDl~D~~sL~~AL~GvDaVIh~a--~G---~lldAA~~~GVkRiV~vSS~~Vy 196 (198)
+.+..+++ ++.+.+.++++|.||.+. .. .+-++|.+.++. +||.++.+.|
T Consensus 99 ~~~~~~~~-~~~~~~~~~~~DlVid~~Dn~~~r~~ln~~~~~~~iP-~i~~~~~g~~ 153 (339)
T PRK07688 99 EAIVQDVT-AEELEELVTGVDLIIDATDNFETRFIVNDAAQKYGIP-WIYGACVGSY 153 (339)
T ss_pred EEEeccCC-HHHHHHHHcCCCEEEEcCCCHHHHHHHHHHHHHhCCC-EEEEeeeeee
Confidence 55666764 456777899999999883 21 267888888854 6777766554
|
|
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0025 Score=58.47 Aligned_cols=72 Identities=11% Similarity=0.032 Sum_probs=54.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+..+++|.|+ |-+|+.+++.|...|.+|.++.|++++........-..+..+..+++.+.+++.++|.||.+
T Consensus 166 ~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a 237 (370)
T TIGR00518 166 EPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGA 237 (370)
T ss_pred CCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEc
Confidence 4566999987 99999999999999999999998876543221111122345667888999999999999976
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0011 Score=53.40 Aligned_cols=64 Identities=9% Similarity=-0.034 Sum_probs=43.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+++|.+.|- |..|+.+++.|+++||+|.+..|++++.......+++.. ++..++++.+|.||.+
T Consensus 1 m~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~-------~s~~e~~~~~dvvi~~ 64 (163)
T PF03446_consen 1 MMKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVA-------DSPAEAAEQADVVILC 64 (163)
T ss_dssp -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEE-------SSHHHHHHHBSEEEE-
T ss_pred CCEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhh-------hhhhhHhhcccceEee
Confidence 467888886 999999999999999999999999876644432333322 1345555666766655
|
1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A .... |
| >PRK06728 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.011 Score=54.46 Aligned_cols=80 Identities=18% Similarity=0.202 Sum_probs=49.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHH-CCCc---EEEEEeCCcccc-cccCCceEEEEccCCCHHHHHHhhcCccEEEEc-C
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIV-KRTR---IKALVKDKRNAM-ESFGTYVESMAGDASNKKFLKTALRGVRSIICP-S 171 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~-~G~~---VralvR~~~~a~-~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~-a 171 (198)
+..+|.|.||||++|+.+++.|.. ...+ ++.+....+.-+ -.+... ++..-++ |++ .+.++|.||.+ .
T Consensus 4 ~~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk~~~~~~~-~l~v~~~-~~~----~~~~~Divf~a~~ 77 (347)
T PRK06728 4 KGYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGKTVQFKGR-EIIIQEA-KIN----SFEGVDIAFFSAG 77 (347)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCCCCeeeCCc-ceEEEeC-CHH----HhcCCCEEEECCC
Confidence 346899999999999999998884 6777 666653322111 112111 2333333 333 35789999987 3
Q ss_pred hhH---HHHHHHhCC
Q 029118 172 EGF---ISNAGSLKG 183 (198)
Q Consensus 172 ~G~---lldAA~~~G 183 (198)
.+. +...+.++|
T Consensus 78 ~~~s~~~~~~~~~~G 92 (347)
T PRK06728 78 GEVSRQFVNQAVSSG 92 (347)
T ss_pred hHHHHHHHHHHHHCC
Confidence 333 555566666
|
|
| >PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0071 Score=56.15 Aligned_cols=88 Identities=16% Similarity=0.119 Sum_probs=53.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHH-CCCc---EEEEEeCCccc-ccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC-hh
Q 029118 100 DAVLVTDGDSDIGQMVILSLIV-KRTR---IKALVKDKRNA-MESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-EG 173 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~-~G~~---VralvR~~~~a-~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a-~G 173 (198)
.+|.|.||||++|+.+++.|++ +..+ ++.+......- ...+.. -+....+..|++. +.++|.||.+. .+
T Consensus 2 ~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~~sg~~~~~f~g-~~~~v~~~~~~~~----~~~~Divf~a~~~~ 76 (369)
T PRK06598 2 KKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQAGGAAPSFGG-KEGTLQDAFDIDA----LKKLDIIITCQGGD 76 (369)
T ss_pred eEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecchhhCCcccccCC-CcceEEecCChhH----hcCCCEEEECCCHH
Confidence 5799999999999999985555 4566 66655432111 112222 1233444555443 47899999873 22
Q ss_pred H---HHHHHHhCCCC-eEEEEcc
Q 029118 174 F---ISNAGSLKGVQ-HVILLSQ 192 (198)
Q Consensus 174 ~---lldAA~~~GVk-RiV~vSS 192 (198)
. +...+.++|++ .+|=.||
T Consensus 77 ~s~~~~~~~~~aG~~~~VID~Ss 99 (369)
T PRK06598 77 YTNEVYPKLRAAGWQGYWIDAAS 99 (369)
T ss_pred HHHHHHHHHHhCCCCeEEEECCh
Confidence 2 66666778876 3443443
|
|
| >TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0047 Score=57.46 Aligned_cols=69 Identities=14% Similarity=0.130 Sum_probs=53.0
Q ss_pred CCCCeEEEEcC----------------CChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHH-HH
Q 029118 97 EARDAVLVTDG----------------DSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFL-KT 159 (198)
Q Consensus 97 ~~~~~ILVTGA----------------TGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL-~~ 159 (198)
..++++||||| ||.+|..++++|..+|++|.++.++.... .+.++ ...|+.+.+.+ ++
T Consensus 183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~---~~~~~--~~~~v~~~~~~~~~ 257 (390)
T TIGR00521 183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL---TPPGV--KSIKVSTAEEMLEA 257 (390)
T ss_pred cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC---CCCCc--EEEEeccHHHHHHH
Confidence 56789999999 57899999999999999999998765432 22233 55788888887 43
Q ss_pred hh----cCccEEEEc
Q 029118 160 AL----RGVRSIICP 170 (198)
Q Consensus 160 AL----~GvDaVIh~ 170 (198)
++ ..+|++|++
T Consensus 258 ~~~~~~~~~D~~i~~ 272 (390)
T TIGR00521 258 ALNELAKDFDIFISA 272 (390)
T ss_pred HHHhhcccCCEEEEc
Confidence 33 368999987
|
This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity. |
| >PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0053 Score=51.64 Aligned_cols=59 Identities=10% Similarity=0.062 Sum_probs=38.7
Q ss_pred CCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHh----hcCccEEEEc
Q 029118 107 GDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA----LRGVRSIICP 170 (198)
Q Consensus 107 ATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~A----L~GvDaVIh~ 170 (198)
+||..|..+++++..+|++|+.+..+.. .. .+.+++++. +...+.+.++ +..+|++||+
T Consensus 27 SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~--~p~~~~~i~--v~sa~em~~~~~~~~~~~Di~I~a 89 (185)
T PF04127_consen 27 SSGKMGAALAEEAARRGAEVTLIHGPSS-LP--PPPGVKVIR--VESAEEMLEAVKELLPSADIIIMA 89 (185)
T ss_dssp --SHHHHHHHHHHHHTT-EEEEEE-TTS-------TTEEEEE---SSHHHHHHHHHHHGGGGSEEEE-
T ss_pred CcCHHHHHHHHHHHHCCCEEEEEecCcc-cc--ccccceEEE--ecchhhhhhhhccccCcceeEEEe
Confidence 5899999999999999999999987642 11 145677776 4454444444 4678999998
|
These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A. |
| >PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0069 Score=54.50 Aligned_cols=71 Identities=11% Similarity=0.104 Sum_probs=55.8
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc--CccEEEEc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICP 170 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~--GvDaVIh~ 170 (198)
..+++|||+|+ |.+|+.+++.+.+.|++|.++..++........ -..+..|..|++.+.+.++ ++|+|+..
T Consensus 10 ~~~~~ilIiG~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~a--d~~~~~~~~d~~~l~~~~~~~~id~vi~~ 82 (395)
T PRK09288 10 PSATRVMLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAPAMQVA--HRSHVIDMLDGDALRAVIEREKPDYIVPE 82 (395)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchHHhh--hheEECCCCCHHHHHHHHHHhCCCEEEEe
Confidence 35668999986 689999999999999999999877654222111 1357788999999999988 89999865
|
|
| >COG2085 Predicted dinucleotide-binding enzymes [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.0037 Score=54.12 Aligned_cols=63 Identities=13% Similarity=0.121 Sum_probs=46.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc----cccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM----ESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~----~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
|++...++||.||..++++|...||+|..-.|+.++.. ..+++. --..+..+|.+.+|.||..
T Consensus 1 m~~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~--------i~~~~~~dA~~~aDVVvLA 67 (211)
T COG2085 1 MMIIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPL--------ITGGSNEDAAALADVVVLA 67 (211)
T ss_pred CcEEEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccc--------cccCChHHHHhcCCEEEEe
Confidence 45667888999999999999999999999966554321 223332 1223557799999999987
|
|
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.0027 Score=56.19 Aligned_cols=66 Identities=15% Similarity=0.061 Sum_probs=53.4
Q ss_pred CCeEEEEc-CCChHHHHHHHHHHHCCCcEEEEEeCCccccccc-CCceEEEEccCCCHHHHHHhhcCc
Q 029118 99 RDAVLVTD-GDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTALRGV 164 (198)
Q Consensus 99 ~~~ILVTG-ATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~-g~~vevV~GDl~D~~sL~~AL~Gv 164 (198)
.+.||||| +.|.||.+|++++.++|+.|.|..|+.++-..+. ..++.....|+++++.+.+....+
T Consensus 7 ~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~ev 74 (289)
T KOG1209|consen 7 PKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEV 74 (289)
T ss_pred CCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHH
Confidence 34677776 5699999999999999999999999887654332 345889999999999998877543
|
|
| >PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0053 Score=48.97 Aligned_cols=64 Identities=17% Similarity=0.238 Sum_probs=47.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC--CcEEEEEeCCcccc----------cccCCceEEEEccCCCHHHHHHhhcCccEE
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAM----------ESFGTYVESMAGDASNKKFLKTALRGVRSI 167 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G--~~VralvR~~~~a~----------~~~g~~vevV~GDl~D~~sL~~AL~GvDaV 167 (198)
++|.|+||+|.+|++++..|..++ .+++.+.+++..+. ...+..+.+..++ .++++++|.|
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~-------~~~~~~aDiv 73 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGD-------YEALKDADIV 73 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESS-------GGGGTTESEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccccc-------ccccccccEE
Confidence 589999999999999999999886 47999988764432 1111234444444 5679999999
Q ss_pred EEc
Q 029118 168 ICP 170 (198)
Q Consensus 168 Ih~ 170 (198)
|.+
T Consensus 74 vit 76 (141)
T PF00056_consen 74 VIT 76 (141)
T ss_dssp EET
T ss_pred EEe
Confidence 987
|
L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C .... |
| >KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0029 Score=56.06 Aligned_cols=73 Identities=21% Similarity=0.217 Sum_probs=58.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc------cccC-CceEEEEccCCCHHHHHHhhc-------C
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM------ESFG-TYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~------~~~g-~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
.++.++|||+.|.||+.+.++|+++|..+.++.-+.+... +..+ ..+-+++.|+++...++++++ -
T Consensus 4 tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~ 83 (261)
T KOG4169|consen 4 TGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGT 83 (261)
T ss_pred cCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCc
Confidence 4788999999999999999999999999988876554421 1122 357889999999999999985 4
Q ss_pred ccEEEEc
Q 029118 164 VRSIICP 170 (198)
Q Consensus 164 vDaVIh~ 170 (198)
+|.+|+-
T Consensus 84 iDIlINg 90 (261)
T KOG4169|consen 84 IDILING 90 (261)
T ss_pred eEEEEcc
Confidence 5888765
|
|
| >TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.018 Score=51.66 Aligned_cols=85 Identities=14% Similarity=0.166 Sum_probs=58.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc-cccccCCceEEEEccCCCHHHHHHhhcC--ccEEEEc-ChhH
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AMESFGTYVESMAGDASNKKFLKTALRG--VRSIICP-SEGF 174 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~-a~~~~g~~vevV~GDl~D~~sL~~AL~G--vDaVIh~-a~G~ 174 (198)
..+|+|-|-||++|+.+.+.|++.|.++++-| +|.+ ..+.++ +. =..++.++-+. +|.++.+ ....
T Consensus 6 ~~~~~~~g~~~~~~~~~~~~~~~~g~~~v~~V-~p~~~~~~v~G--~~-------~y~sv~dlp~~~~~Dlavi~vpa~~ 75 (286)
T TIGR01019 6 DTKVIVQGITGSQGSFHTEQMLAYGTNIVGGV-TPGKGGTTVLG--LP-------VFDSVKEAVEETGANASVIFVPAPF 75 (286)
T ss_pred CCcEEEecCCcHHHHHHHHHHHhCCCCEEEEE-CCCCCcceecC--ee-------ccCCHHHHhhccCCCEEEEecCHHH
Confidence 45799999999999999999999999977766 4542 222223 11 12344555554 7888776 2222
Q ss_pred ---HHHHHHhCCCCeEEEEccc
Q 029118 175 ---ISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 175 ---lldAA~~~GVkRiV~vSS~ 193 (198)
.++.|.++||+.+|.+|+.
T Consensus 76 v~~~l~e~~~~Gvk~avIis~G 97 (286)
T TIGR01019 76 AADAIFEAIDAGIELIVCITEG 97 (286)
T ss_pred HHHHHHHHHHCCCCEEEEECCC
Confidence 5666777899999998874
|
ATP citrate lyases appear to form an outgroup. |
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.0043 Score=53.26 Aligned_cols=62 Identities=8% Similarity=0.111 Sum_probs=43.6
Q ss_pred EEEc-CCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhh-------cCccEEEEc
Q 029118 103 LVTD-GDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL-------RGVRSIICP 170 (198)
Q Consensus 103 LVTG-ATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL-------~GvDaVIh~ 170 (198)
.||. +||.||++++++|.++|++|.++.|+.. ... . .....|+.|.+++.+.+ ..+|++||+
T Consensus 18 ~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~-l~~-~----~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnn 87 (227)
T TIGR02114 18 SITNHSTGHLGKIITETFLSAGHEVTLVTTKRA-LKP-E----PHPNLSIREIETTKDLLITLKELVQEHDILIHS 87 (227)
T ss_pred eecCCcccHHHHHHHHHHHHCCCEEEEEcChhh-ccc-c----cCCcceeecHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 3444 5999999999999999999998875321 111 0 11346788877766543 468999998
|
In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity. |
| >PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.021 Score=50.14 Aligned_cols=88 Identities=16% Similarity=0.113 Sum_probs=66.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc--cCCceEEEEccCCCHHHHHHhh--cCccEEEEcC----
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--FGTYVESMAGDASNKKFLKTAL--RGVRSIICPS---- 171 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~--~g~~vevV~GDl~D~~sL~~AL--~GvDaVIh~a---- 171 (198)
|+|||.|||+- |+.++..|.++|+ |.+-+-..-..... ..+.++++.|-+.|.+.+.+-+ +++++||-..
T Consensus 1 m~ILvlgGTtE-~r~la~~L~~~g~-v~~sv~t~~g~~~~~~~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vIDATHPfA 78 (249)
T PF02571_consen 1 MKILVLGGTTE-GRKLAERLAEAGY-VIVSVATSYGGELLKPELPGLEVRVGRLGDEEGLAEFLRENGIDAVIDATHPFA 78 (249)
T ss_pred CEEEEEechHH-HHHHHHHHHhcCC-EEEEEEhhhhHhhhccccCCceEEECCCCCHHHHHHHHHhCCCcEEEECCCchH
Confidence 68999999986 7899999999999 66665433222111 2246789999999999999999 5899999652
Q ss_pred ---hhHHHHHHHhCCCCeEEE
Q 029118 172 ---EGFISNAGSLKGVQHVIL 189 (198)
Q Consensus 172 ---~G~lldAA~~~GVkRiV~ 189 (198)
..+..++|++.|+..+-|
T Consensus 79 ~~is~na~~a~~~~~ipylR~ 99 (249)
T PF02571_consen 79 AEISQNAIEACRELGIPYLRF 99 (249)
T ss_pred HHHHHHHHHHHhhcCcceEEE
Confidence 234788899888877655
|
Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process |
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.0049 Score=53.90 Aligned_cols=74 Identities=14% Similarity=0.133 Sum_probs=48.8
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc---cCCceEEEEcc-CCCH-HHHHHhh-cCccEEEEc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGD-ASNK-KFLKTAL-RGVRSIICP 170 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~---~g~~vevV~GD-l~D~-~sL~~AL-~GvDaVIh~ 170 (198)
.++++|||+||+|.+|..++..+...|.+|.++++++++.... ++. -+++..+ -.+. +.+.+.. .|+|.||.+
T Consensus 150 ~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa-~~vi~~~~~~~~~~~i~~~~~~gvd~v~d~ 228 (338)
T cd08295 150 KKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGF-DDAFNYKEEPDLDAALKRYFPNGIDIYFDN 228 (338)
T ss_pred CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC-ceeEEcCCcccHHHHHHHhCCCCcEEEEEC
Confidence 3467999999999999999998888999999999887654322 332 1222211 1121 2223222 478999987
Q ss_pred C
Q 029118 171 S 171 (198)
Q Consensus 171 a 171 (198)
.
T Consensus 229 ~ 229 (338)
T cd08295 229 V 229 (338)
T ss_pred C
Confidence 3
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.018 Score=51.80 Aligned_cols=94 Identities=13% Similarity=0.124 Sum_probs=57.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCH---HHHHHhh--cCccEEEEcC
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTAL--RGVRSIICPS 171 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~---~sL~~AL--~GvDaVIh~a 171 (198)
.++.+|||+||+|-+|...+..+.+.|+.+.+.+.+.++.......+...+. |+.+. +.+++.. +|+|.|+.+.
T Consensus 141 ~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~~lGAd~vi-~y~~~~~~~~v~~~t~g~gvDvv~D~v 219 (326)
T COG0604 141 KPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLKELGADHVI-NYREEDFVEQVRELTGGKGVDVVLDTV 219 (326)
T ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHhcCCCEEE-cCCcccHHHHHHHHcCCCCceEEEECC
Confidence 3478999999999999999988888898877777666544322222222221 23332 2333444 3699999884
Q ss_pred hhH----HHHHHHhCCCCeEEEEccc
Q 029118 172 EGF----ISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 172 ~G~----lldAA~~~GVkRiV~vSS~ 193 (198)
-+. .+++ ...+ .|+|.+...
T Consensus 220 G~~~~~~~l~~-l~~~-G~lv~ig~~ 243 (326)
T COG0604 220 GGDTFAASLAA-LAPG-GRLVSIGAL 243 (326)
T ss_pred CHHHHHHHHHH-hccC-CEEEEEecC
Confidence 322 2333 3344 677766543
|
|
| >cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.02 Score=48.54 Aligned_cols=93 Identities=13% Similarity=0.099 Sum_probs=59.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHH---hh--cCccEEEEcCh
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKT---AL--RGVRSIICPSE 172 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~---AL--~GvDaVIh~a~ 172 (198)
+..+++|+|+++-+|..+++.+...|++|.+.+++.++.......+... ..|..+.+.... .. .++|.++++..
T Consensus 166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~i~~~g 244 (342)
T cd08266 166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKELGADY-VIDYRKEDFVREVRELTGKRGVDVVVEHVG 244 (342)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCe-EEecCChHHHHHHHHHhCCCCCcEEEECCc
Confidence 4568999999999999999999999999999988765432211111111 124444433332 22 36899998732
Q ss_pred hH----HHHHHHhCCCCeEEEEccc
Q 029118 173 GF----ISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 173 G~----lldAA~~~GVkRiV~vSS~ 193 (198)
+. .++..+.. .++|.+++.
T Consensus 245 ~~~~~~~~~~l~~~--G~~v~~~~~ 267 (342)
T cd08266 245 AATWEKSLKSLARG--GRLVTCGAT 267 (342)
T ss_pred HHHHHHHHHHhhcC--CEEEEEecC
Confidence 22 34444433 578887754
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone |
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.0079 Score=53.55 Aligned_cols=69 Identities=10% Similarity=0.019 Sum_probs=51.8
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
...+++++|.|+ |.+|+.+++.|...|.+|.+..|++++.......+.+++ +.+.+.+.++++|.||.+
T Consensus 149 ~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~G~~~~-----~~~~l~~~l~~aDiVI~t 217 (296)
T PRK08306 149 TIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARITEMGLSPF-----HLSELAEEVGKIDIIFNT 217 (296)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeee-----cHHHHHHHhCCCCEEEEC
Confidence 345789999997 889999999999999999999998755322212223433 234677888999999986
|
|
| >cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.014 Score=49.97 Aligned_cols=92 Identities=13% Similarity=0.066 Sum_probs=56.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCH---HHHHHhh-cCccEEEEcChh
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTAL-RGVRSIICPSEG 173 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~---~sL~~AL-~GvDaVIh~a~G 173 (198)
++.+|||+||+|-+|..++..+...|.+|.+.++++++.......+++.+ .|..+. +.+.+.. .|+|.||.+..+
T Consensus 143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~~Ga~~v-i~~~~~~~~~~v~~~~~~gvd~vld~~g~ 221 (329)
T cd08294 143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKELGFDAV-FNYKTVSLEEALKEAAPDGIDCYFDNVGG 221 (329)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEE-EeCCCccHHHHHHHHCCCCcEEEEECCCH
Confidence 46799999999999999999998899999999987765432211223222 123322 2233222 478999987322
Q ss_pred H----HHHHHHhCCCCeEEEEcc
Q 029118 174 F----ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 174 ~----lldAA~~~GVkRiV~vSS 192 (198)
. .++..+.. .|||.++.
T Consensus 222 ~~~~~~~~~l~~~--G~iv~~g~ 242 (329)
T cd08294 222 EFSSTVLSHMNDF--GRVAVCGS 242 (329)
T ss_pred HHHHHHHHhhccC--CEEEEEcc
Confidence 2 23333322 46666543
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac |
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.0024 Score=55.95 Aligned_cols=67 Identities=24% Similarity=0.288 Sum_probs=47.5
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCC-CcEEEEEeCCcccccc---cCCc--eEEEEccCCCHHHHHHhhcCccEEEE
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMES---FGTY--VESMAGDASNKKFLKTALRGVRSIIC 169 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G-~~VralvR~~~~a~~~---~g~~--vevV~GDl~D~~sL~~AL~GvDaVIh 169 (198)
+..++++||+|+ |.+|+.++..|...| .+|.++.|+.+++... +... +++ +. .+.+++.++|.||+
T Consensus 120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~---~~----~~~~~~~~~DivIn 191 (278)
T PRK00258 120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL---DL----ELQEELADFDLIIN 191 (278)
T ss_pred CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee---cc----cchhccccCCEEEE
Confidence 345678999997 999999999999999 7899999988765322 1111 111 11 22456678888887
Q ss_pred c
Q 029118 170 P 170 (198)
Q Consensus 170 ~ 170 (198)
+
T Consensus 192 a 192 (278)
T PRK00258 192 A 192 (278)
T ss_pred C
Confidence 6
|
|
| >PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.0064 Score=55.74 Aligned_cols=52 Identities=15% Similarity=0.293 Sum_probs=42.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
.++|.|.||+|.+|+.+++.|..+||+|++..|++. +...+++.++|.||.+
T Consensus 98 ~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~~--------------------~~~~~~~~~aDlVila 149 (374)
T PRK11199 98 LRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDDW--------------------DRAEDILADAGMVIVS 149 (374)
T ss_pred cceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCcc--------------------hhHHHHHhcCCEEEEe
Confidence 468999999999999999999999999999987531 1234566778888766
|
|
| >PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.0074 Score=46.73 Aligned_cols=81 Identities=15% Similarity=0.168 Sum_probs=49.3
Q ss_pred CeEEEEcCC---ChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc-C---h
Q 029118 100 DAVLVTDGD---SDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-S---E 172 (198)
Q Consensus 100 ~~ILVTGAT---GfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~-a---~ 172 (198)
++|+|.||+ +..|..+++.|.++|++|..+ ++.. .+..+ ... . .++.+.-..+|.++.+ . .
T Consensus 1 ksiAVvGaS~~~~~~g~~v~~~l~~~G~~v~~V--np~~-~~i~G--~~~-y------~sl~e~p~~iDlavv~~~~~~~ 68 (116)
T PF13380_consen 1 KSIAVVGASDNPGKFGYRVLRNLKAAGYEVYPV--NPKG-GEILG--IKC-Y------PSLAEIPEPIDLAVVCVPPDKV 68 (116)
T ss_dssp -EEEEET--SSTTSHHHHHHHHHHHTT-EEEEE--STTC-SEETT--EE--B------SSGGGCSST-SEEEE-S-HHHH
T ss_pred CEEEEEcccCCCCChHHHHHHHHHhCCCEEEEE--CCCc-eEECc--EEe-e------ccccCCCCCCCEEEEEcCHHHH
Confidence 479999998 779999999999999999887 4433 12222 221 1 1233323677888776 2 2
Q ss_pred hHHHHHHHhCCCCeEEEEcc
Q 029118 173 GFISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 173 G~lldAA~~~GVkRiV~vSS 192 (198)
..+++.|.+.|++.+++.++
T Consensus 69 ~~~v~~~~~~g~~~v~~~~g 88 (116)
T PF13380_consen 69 PEIVDEAAALGVKAVWLQPG 88 (116)
T ss_dssp HHHHHHHHHHT-SEEEE-TT
T ss_pred HHHHHHHHHcCCCEEEEEcc
Confidence 23778888889999998876
|
|
| >TIGR01142 purT phosphoribosylglycinamide formyltransferase 2 | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.011 Score=52.96 Aligned_cols=67 Identities=12% Similarity=0.110 Sum_probs=54.0
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc--CccEEEEc
Q 029118 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICP 170 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~--GvDaVIh~ 170 (198)
+|+|.| +|..|+.+++.+.+.|++|.++..++......+. -+.+..|..|++.+.+.++ ++|+|+..
T Consensus 1 kililG-~g~~~~~l~~aa~~~G~~v~~~d~~~~~~~~~~a--d~~~~~~~~d~~~l~~~~~~~~id~v~~~ 69 (380)
T TIGR01142 1 RVLLLG-SGELGKEVAIEAQRLGVEVIAVDRYANAPAMQVA--HRSYVINMLDGDALRAVIEREKPDYIVPE 69 (380)
T ss_pred CEEEEC-CCHHHHHHHHHHHHcCCEEEEEeCCCCCchhhhC--ceEEEcCCCCHHHHHHHHHHhCCCEEEec
Confidence 589999 5999999999999999999999987754322222 2567789999999998887 89998754
|
This enzyme is an alternative to PurN (TIGR00639) |
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.0035 Score=58.23 Aligned_cols=67 Identities=18% Similarity=0.223 Sum_probs=52.1
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCC-CcEEEEEeCCcccccc---cCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G-~~VralvR~~~~a~~~---~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
..+.++|+|.|+ |.+|+.+++.|...| .+|++..|+++++... ++ ...+ +.+.+.+++.++|.||.+
T Consensus 177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g--~~~i-----~~~~l~~~l~~aDvVi~a 247 (417)
T TIGR01035 177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELG--GEAV-----KFEDLEEYLAEADIVISS 247 (417)
T ss_pred CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcC--CeEe-----eHHHHHHHHhhCCEEEEC
Confidence 466789999997 999999999999999 7899999988764322 22 1222 335778889999999987
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.0094 Score=50.15 Aligned_cols=40 Identities=10% Similarity=0.093 Sum_probs=34.4
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA 136 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a 136 (198)
+..+++|+|+|. |.+|+++++.|.+.|++|.+..+++++.
T Consensus 25 ~l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~ 64 (200)
T cd01075 25 SLEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAV 64 (200)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHH
Confidence 456789999998 6999999999999999999888876543
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc |
| >PLN02948 phosphoribosylaminoimidazole carboxylase | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.04 Score=53.63 Aligned_cols=75 Identities=12% Similarity=0.153 Sum_probs=58.2
Q ss_pred ccccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 93 EFPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 93 ~~~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+.++..+++|+|.|+. .+|+.++..+.+.|++|.++..++......+. -+.+.+++.|++.+.+..+.+|+|...
T Consensus 16 ~~~~~~~k~IgIIGgG-qlg~mla~aA~~lG~~Vi~ld~~~~apa~~~A--D~~~v~~~~D~~~l~~~a~~~dvIt~e 90 (577)
T PLN02948 16 PVHGVSETVVGVLGGG-QLGRMLCQAASQMGIKVKVLDPLEDCPASSVA--ARHVVGSFDDRAAVREFAKRCDVLTVE 90 (577)
T ss_pred cccCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCCchhhhC--ceeeeCCCCCHHHHHHHHHHCCEEEEe
Confidence 3444677889999975 99999999999999999999877653222222 246679999999999999889987543
|
|
| >PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.015 Score=52.77 Aligned_cols=76 Identities=16% Similarity=0.134 Sum_probs=48.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC-CcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc-ChhH--
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-SEGF-- 174 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G-~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~-a~G~-- 174 (198)
+.+|.|.||||++|+.+++.|.++. .++..+..+... ++.+ ....++++|.||.+ ..+.
T Consensus 2 ~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~~~~--------------~~~~---~~~~~~~~DvvFlalp~~~s~ 64 (313)
T PRK11863 2 KPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEAKRK--------------DAAA---RRELLNAADVAILCLPDDAAR 64 (313)
T ss_pred CcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecCCCC--------------cccC---chhhhcCCCEEEECCCHHHHH
Confidence 4689999999999999999887654 244444432221 1111 23456789999987 3343
Q ss_pred -HHHHHHhCCCCeEEEEcc
Q 029118 175 -ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 175 -lldAA~~~GVkRiV~vSS 192 (198)
++..+.++|+ +||=+|+
T Consensus 65 ~~~~~~~~~g~-~VIDlSa 82 (313)
T PRK11863 65 EAVALIDNPAT-RVIDAST 82 (313)
T ss_pred HHHHHHHhCCC-EEEECCh
Confidence 5555556665 4665554
|
|
| >PRK08040 putative semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.031 Score=51.16 Aligned_cols=88 Identities=14% Similarity=0.123 Sum_probs=51.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC---cEEEEEeCCcccc-cccCCceEEEEccCCCHHHHHHhhcCccEEEEc-Ch
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRT---RIKALVKDKRNAM-ESFGTYVESMAGDASNKKFLKTALRGVRSIICP-SE 172 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~---~VralvR~~~~a~-~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~-a~ 172 (198)
...+|.|.||||++|+.+++.|.++.| +++.+..+.+.-+ -.+... ++..-++. ...+.++|.||.+ ..
T Consensus 3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~saG~~~~~~~~-~~~v~~~~-----~~~~~~~Dvvf~a~p~ 76 (336)
T PRK08040 3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALASEESAGETLRFGGK-SVTVQDAA-----EFDWSQAQLAFFVAGR 76 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccCcCCceEEECCc-ceEEEeCc-----hhhccCCCEEEECCCH
Confidence 356899999999999999998888655 5666653322111 112111 11111321 1234789999987 33
Q ss_pred hH---HHHHHHhCCCCeEEEEcc
Q 029118 173 GF---ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 173 G~---lldAA~~~GVkRiV~vSS 192 (198)
+. +...+.++|+ ++|=+|+
T Consensus 77 ~~s~~~~~~~~~~g~-~VIDlS~ 98 (336)
T PRK08040 77 EASAAYAEEATNAGC-LVIDSSG 98 (336)
T ss_pred HHHHHHHHHHHHCCC-EEEECCh
Confidence 33 5555566676 3554443
|
|
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.027 Score=47.30 Aligned_cols=98 Identities=13% Similarity=0.126 Sum_probs=65.9
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCc-------------------ccc------cccCCceEE--
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR-------------------NAM------ESFGTYVES-- 146 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~-------------------~a~------~~~g~~vev-- 146 (198)
....+.+|+|.| .|-+|+++++.|...|. +++++.++.- ++. ..+.+++++
T Consensus 17 ~kl~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~ 95 (202)
T TIGR02356 17 QRLLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTA 95 (202)
T ss_pred HHhcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEE
Confidence 466778899998 67799999999999997 7888876521 100 112344443
Q ss_pred EEccCCCHHHHHHhhcCccEEEEcC--hh---HHHHHHHhCCCCeEEEEcccce
Q 029118 147 MAGDASNKKFLKTALRGVRSIICPS--EG---FISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 147 V~GDl~D~~sL~~AL~GvDaVIh~a--~G---~lldAA~~~GVkRiV~vSS~~V 195 (198)
+...+ +.+.+.+.++++|.||.+. .. .+-++|+++++ .+|+.+..+.
T Consensus 96 ~~~~i-~~~~~~~~~~~~D~Vi~~~d~~~~r~~l~~~~~~~~i-p~i~~~~~g~ 147 (202)
T TIGR02356 96 LKERV-TAENLELLINNVDLVLDCTDNFATRYLINDACVALGT-PLISAAVVGF 147 (202)
T ss_pred ehhcC-CHHHHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCC-CEEEEEeccC
Confidence 44444 4467788899999999883 11 26678888886 4666665443
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >PRK08655 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.0062 Score=57.04 Aligned_cols=64 Identities=16% Similarity=0.082 Sum_probs=47.2
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-cCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-FGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
++|+|.||+|.+|+.+++.|..+|++|.+..|+++..... ...++++ .....+++.++|.||.+
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~-------~~~~~e~~~~aDvVIla 65 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEY-------ANDNIDAAKDADIVIIS 65 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCee-------ccCHHHHhccCCEEEEe
Confidence 4799999999999999999999999999999987653211 1112221 12345678889999876
|
|
| >cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.037 Score=47.57 Aligned_cols=94 Identities=17% Similarity=0.199 Sum_probs=56.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc--cCCceEEEEccCCCH-HHHHHhh-cCccEEEEcCh
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--FGTYVESMAGDASNK-KFLKTAL-RGVRSIICPSE 172 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~--~g~~vevV~GDl~D~-~sL~~AL-~GvDaVIh~a~ 172 (198)
.+.++|+|+||+|-+|+.++..+...|.+|.++++++++.... ++. -.++..+-.+. ..+.... +++|.||.+..
T Consensus 138 ~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~-~~v~~~~~~~~~~~~~~~~~~~vd~v~~~~g 216 (329)
T cd08250 138 KSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKSLGC-DRPINYKTEDLGEVLKKEYPKGVDVVYESVG 216 (329)
T ss_pred CCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHHHcCC-ceEEeCCCccHHHHHHHhcCCCCeEEEECCc
Confidence 3467899999999999999999999999999998876543222 221 12232222221 1222211 57899998732
Q ss_pred hH----HHHHHHhCCCCeEEEEccc
Q 029118 173 GF----ISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 173 G~----lldAA~~~GVkRiV~vSS~ 193 (198)
+. .++..... .++|.+++.
T Consensus 217 ~~~~~~~~~~l~~~--g~~v~~g~~ 239 (329)
T cd08250 217 GEMFDTCVDNLALK--GRLIVIGFI 239 (329)
T ss_pred HHHHHHHHHHhccC--CeEEEEecc
Confidence 22 33333333 467766543
|
Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. |
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.012 Score=48.68 Aligned_cols=55 Identities=16% Similarity=0.192 Sum_probs=45.5
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
.+..+++|||.|+.+.+|..+++.|.++|.+|.+..|+. +.+.+.+..+|.||.+
T Consensus 40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~---------------------~~l~~~l~~aDiVIsa 94 (168)
T cd01080 40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT---------------------KNLKEHTKQADIVIVA 94 (168)
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc---------------------hhHHHHHhhCCEEEEc
Confidence 467889999999977889999999999999988888753 3456677888888876
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.0059 Score=54.58 Aligned_cols=34 Identities=18% Similarity=0.226 Sum_probs=30.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCc--EEEEEeCC
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTR--IKALVKDK 133 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~--VralvR~~ 133 (198)
++|.|+||||.+|.+++..|+..|+. |.+++|++
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~ 36 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPK 36 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcc
Confidence 57999999999999999999999875 99999854
|
The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox |
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.0048 Score=54.99 Aligned_cols=66 Identities=20% Similarity=0.205 Sum_probs=50.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCC-CcEEEEEeCCcccccc---cCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G-~~VralvR~~~~a~~~---~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
.+.++|+|.|+ |.+|+.+++.|...| ++|.+..|+++++... ++ ..+ .+.+.+.+++..+|.||.+
T Consensus 176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g--~~~-----~~~~~~~~~l~~aDvVi~a 245 (311)
T cd05213 176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELG--GNA-----VPLDELLELLNEADVVISA 245 (311)
T ss_pred ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcC--CeE-----EeHHHHHHHHhcCCEEEEC
Confidence 46789999998 999999999998866 6788899987654322 23 222 2345678889999999988
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.0075 Score=52.32 Aligned_cols=73 Identities=8% Similarity=0.023 Sum_probs=47.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceE-EEEccC-CCHHHHHHhh--cCccEEEEc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVE-SMAGDA-SNKKFLKTAL--RGVRSIICP 170 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~ve-vV~GDl-~D~~sL~~AL--~GvDaVIh~ 170 (198)
++.+|||+||+|.+|..++..+...|.+|.+.++++++.......+++ ++..+- .+.....+.+ +|+|.||.+
T Consensus 138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~gvdvv~d~ 214 (325)
T TIGR02825 138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKKLGFDVAFNYKTVKSLEETLKKASPDGYDCYFDN 214 (325)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeccccccHHHHHHHhCCCCeEEEEEC
Confidence 467999999999999999988888999999999877654322112232 222211 1222222222 478999987
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. |
| >PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.021 Score=52.39 Aligned_cols=82 Identities=12% Similarity=0.037 Sum_probs=54.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc----ccccCCceEEEEccCCCHHHHHHhhc-CccEEEEc-C
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA----MESFGTYVESMAGDASNKKFLKTALR-GVRSIICP-S 171 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a----~~~~g~~vevV~GDl~D~~sL~~AL~-GvDaVIh~-a 171 (198)
.+++++|||+.| +|..+++.|.++|++|.+..++.... ......++++..+... .. .+. ++|.||.. .
T Consensus 4 ~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~~~--~~---~~~~~~d~vV~s~g 77 (447)
T PRK02472 4 QNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVICGSHP--LE---LLDEDFDLMVKNPG 77 (447)
T ss_pred CCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEEeCCCC--HH---HhcCcCCEEEECCC
Confidence 457899999988 99999999999999999998765321 1122234666655422 22 133 48988875 1
Q ss_pred ---hhHHHHHHHhCCCC
Q 029118 172 ---EGFISNAGSLKGVQ 185 (198)
Q Consensus 172 ---~G~lldAA~~~GVk 185 (198)
...++++|++.|++
T Consensus 78 i~~~~~~~~~a~~~~i~ 94 (447)
T PRK02472 78 IPYTNPMVEKALEKGIP 94 (447)
T ss_pred CCCCCHHHHHHHHCCCc
Confidence 23367777777654
|
|
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.0051 Score=57.17 Aligned_cols=67 Identities=25% Similarity=0.296 Sum_probs=51.5
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcccccc---cCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~~~---~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+.++++|+|.|+ |.+|+.+++.|...|. +|.+..|+++++... ++ . ++.+.+.+.+++.++|.||.+
T Consensus 179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g--~-----~~~~~~~~~~~l~~aDvVI~a 249 (423)
T PRK00045 179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFG--G-----EAIPLDELPEALAEADIVISS 249 (423)
T ss_pred CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcC--C-----cEeeHHHHHHHhccCCEEEEC
Confidence 356789999987 9999999999999997 788899987664322 22 1 233345677889999999987
|
|
| >PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.0051 Score=53.61 Aligned_cols=71 Identities=14% Similarity=0.121 Sum_probs=47.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccccc--CCceEEE-----EccCCCHHHHHHhhcCccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESM-----AGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~--g~~vevV-----~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+++|.|.|+ |.+|..++..|..+|++|.++.|+++...... +...... ...+.-..+..++++++|.||.+
T Consensus 1 mmkI~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~ 78 (325)
T PRK00094 1 MMKIAVLGA-GSWGTALAIVLARNGHDVTLWARDPEQAAEINADRENPRYLPGIKLPDNLRATTDLAEALADADLILVA 78 (325)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccCCCCcCCCCeEEeCCHHHHHhCCCEEEEe
Confidence 467999985 99999999999999999999999875543211 1000000 00111122445678899999987
|
|
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.008 Score=54.06 Aligned_cols=97 Identities=14% Similarity=0.109 Sum_probs=66.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHC-CCcEEEEE--e-CCcccccccCCceEEEEccCCCHHHHHHhh--cCccEEEEc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALV--K-DKRNAMESFGTYVESMAGDASNKKFLKTAL--RGVRSIICP 170 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~-G~~Vralv--R-~~~~a~~~~g~~vevV~GDl~D~~sL~~AL--~GvDaVIh~ 170 (198)
....+|||||+-|.+|..++..|..+ |-+-+.+. + ++.... ..| .++..|+.|...|++.+ ..+|-+||.
T Consensus 42 ~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V~-~~G---PyIy~DILD~K~L~eIVVn~RIdWL~Hf 117 (366)
T KOG2774|consen 42 QKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANVT-DVG---PYIYLDILDQKSLEEIVVNKRIDWLVHF 117 (366)
T ss_pred CCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchhhc-ccC---CchhhhhhccccHHHhhcccccceeeeH
Confidence 34557999999999999999887654 55544443 2 222211 123 46788999999999887 456888886
Q ss_pred -C------------------hh--HHHHHHHhCCCCeEEEEcccceecC
Q 029118 171 -S------------------EG--FISNAGSLKGVQHVILLSQGAVVCL 198 (198)
Q Consensus 171 -a------------------~G--~lldAA~~~GVkRiV~vSS~~Vy~~ 198 (198)
+ .| ++++.|+++..+-|| -|+++++++
T Consensus 118 SALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~kL~iFV-PSTIGAFGP 165 (366)
T KOG2774|consen 118 SALLSAVGETNVPLALQVNIRGVHNILQVAAKHKLKVFV-PSTIGAFGP 165 (366)
T ss_pred HHHHHHhcccCCceeeeecchhhhHHHHHHHHcCeeEee-cccccccCC
Confidence 1 22 389999999887655 467777653
|
|
| >cd08230 glucose_DH Glucose dehydrogenase | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.031 Score=49.41 Aligned_cols=90 Identities=18% Similarity=0.109 Sum_probs=54.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeC---CcccccccCCceEEEEccCCCHHHH-HHhhcCccEEEEcC--
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD---KRNAMESFGTYVESMAGDASNKKFL-KTALRGVRSIICPS-- 171 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~---~~~a~~~~g~~vevV~GDl~D~~sL-~~AL~GvDaVIh~a-- 171 (198)
++.+|||+|+ |-+|...+..+...|.+|.++.|+ +++.......+++.+ |..+.+.. .....++|.||-+.
T Consensus 172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~~Ga~~v--~~~~~~~~~~~~~~~~d~vid~~g~ 248 (355)
T cd08230 172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATYV--NSSKTPVAEVKLVGEFDLIIEATGV 248 (355)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEe--cCCccchhhhhhcCCCCEEEECcCC
Confidence 5678999986 999999998888899999999983 333221111224443 33221111 12346799999873
Q ss_pred hhH---HHHHHHhCCCCeEEEEcc
Q 029118 172 EGF---ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 172 ~G~---lldAA~~~GVkRiV~vSS 192 (198)
..+ .++.++..| ++|.++.
T Consensus 249 ~~~~~~~~~~l~~~G--~~v~~G~ 270 (355)
T cd08230 249 PPLAFEALPALAPNG--VVILFGV 270 (355)
T ss_pred HHHHHHHHHHccCCc--EEEEEec
Confidence 212 344444444 6776654
|
Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai |
| >PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.015 Score=43.82 Aligned_cols=78 Identities=12% Similarity=0.219 Sum_probs=53.5
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC-h--
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-E-- 172 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a-~-- 172 (198)
+..+++|||.|+ |.+|.+-++.|++.|.+|+++..+.+.. ...+++..-.+ +.-+++++.||.+. .
T Consensus 4 ~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~~~~----~~~i~~~~~~~------~~~l~~~~lV~~at~d~~ 72 (103)
T PF13241_consen 4 DLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEIEFS----EGLIQLIRREF------EEDLDGADLVFAATDDPE 72 (103)
T ss_dssp --TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSEHHH----HTSCEEEESS-------GGGCTTESEEEE-SS-HH
T ss_pred EcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCchhhh----hhHHHHHhhhH------HHHHhhheEEEecCCCHH
Confidence 456789999998 9999999999999999999998764111 13466665554 34489999999773 1
Q ss_pred --hHHHHHHHhCCC
Q 029118 173 --GFISNAGSLKGV 184 (198)
Q Consensus 173 --G~lldAA~~~GV 184 (198)
..+.+.|++.|+
T Consensus 73 ~n~~i~~~a~~~~i 86 (103)
T PF13241_consen 73 LNEAIYADARARGI 86 (103)
T ss_dssp HHHHHHHHHHHTTS
T ss_pred HHHHHHHHHhhCCE
Confidence 126777776653
|
|
| >PRK05678 succinyl-CoA synthetase subunit alpha; Validated | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.045 Score=49.18 Aligned_cols=86 Identities=13% Similarity=0.158 Sum_probs=59.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc-cccccCCceEEEEccCCCHHHHHHhhcC--ccEEEEc-Chh
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AMESFGTYVESMAGDASNKKFLKTALRG--VRSIICP-SEG 173 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~-a~~~~g~~vevV~GDl~D~~sL~~AL~G--vDaVIh~-a~G 173 (198)
.+.+|+|-|-||.+|+.+++.|++.|+++...| +|.. ..+.++ + .-..++.++-+. +|.+|.+ ...
T Consensus 7 ~~~~~~v~~~~~~~g~~~l~~l~~~g~~~v~pV-np~~~~~~v~G--~-------~~y~sv~dlp~~~~~DlAvi~vp~~ 76 (291)
T PRK05678 7 KDTKVIVQGITGKQGTFHTEQMLAYGTNIVGGV-TPGKGGTTVLG--L-------PVFNTVAEAVEATGANASVIYVPPP 76 (291)
T ss_pred CCCeEEEeCCCchHHHHHHHHHHHCCCCEEEEE-CCCCCCCeEeC--e-------eccCCHHHHhhccCCCEEEEEcCHH
Confidence 456899999999999999999999898844455 5542 222233 1 222345555554 8988776 222
Q ss_pred H---HHHHHHhCCCCeEEEEccc
Q 029118 174 F---ISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 174 ~---lldAA~~~GVkRiV~vSS~ 193 (198)
. .++.|.++||+.+|.+|+.
T Consensus 77 ~v~~~l~e~~~~gvk~avI~s~G 99 (291)
T PRK05678 77 FAADAILEAIDAGIDLIVCITEG 99 (291)
T ss_pred HHHHHHHHHHHCCCCEEEEECCC
Confidence 2 6677778999999999874
|
|
| >TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.02 Score=52.10 Aligned_cols=75 Identities=15% Similarity=0.114 Sum_probs=47.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHHC-CCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc-ChhH---
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-SEGF--- 174 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~-G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~-a~G~--- 174 (198)
.+|.|.||||++|..++|.|..+ ..++..+.-+.. + +..+ ..+.++++|.||.+ ..+.
T Consensus 2 ~~v~IvGasGy~G~el~rlL~~HP~~el~~l~s~~~-----~---------~~~~---~~~~~~~~D~vFlalp~~~s~~ 64 (310)
T TIGR01851 2 PKVFIDGEAGTTGLQIRERLSGRDDIELLSIAPDRR-----K---------DAAE---RAKLLNAADVAILCLPDDAARE 64 (310)
T ss_pred CeEEEECCCChhHHHHHHHHhCCCCeEEEEEecccc-----c---------CcCC---HhHhhcCCCEEEECCCHHHHHH
Confidence 47999999999999999988765 234555532211 1 1112 34566889999987 3333
Q ss_pred HHHHHHhCCCCeEEEEcc
Q 029118 175 ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 175 lldAA~~~GVkRiV~vSS 192 (198)
++..+.++|+ +||=+|+
T Consensus 65 ~~~~~~~~g~-~VIDlSa 81 (310)
T TIGR01851 65 AVSLVDNPNT-CIIDAST 81 (310)
T ss_pred HHHHHHhCCC-EEEECCh
Confidence 5555556665 4665664
|
This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment. |
| >cd08244 MDR_enoyl_red Possible enoyl reductase | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.034 Score=47.30 Aligned_cols=92 Identities=13% Similarity=0.090 Sum_probs=57.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCH---HHHHHhh--cCccEEEEcCh
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTAL--RGVRSIICPSE 172 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~---~sL~~AL--~GvDaVIh~a~ 172 (198)
+..+|+|+|++|-+|..++..+...|.+|.++++++++.......++..+ .+..++ ..+.+.. +++|.|+.+..
T Consensus 142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vl~~~g 220 (324)
T cd08244 142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVRALGADVA-VDYTRPDWPDQVREALGGGGVTVVLDGVG 220 (324)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEE-EecCCccHHHHHHHHcCCCCceEEEECCC
Confidence 46789999999999999999999999999999987755332211122221 123332 3344444 46899998732
Q ss_pred hH----HHHHHHhCCCCeEEEEcc
Q 029118 173 GF----ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 173 G~----lldAA~~~GVkRiV~vSS 192 (198)
+. .+++.... .++|.++.
T Consensus 221 ~~~~~~~~~~l~~~--g~~v~~g~ 242 (324)
T cd08244 221 GAIGRAALALLAPG--GRFLTYGW 242 (324)
T ss_pred hHhHHHHHHHhccC--cEEEEEec
Confidence 21 33333333 46776653
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr |
| >PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.013 Score=42.47 Aligned_cols=63 Identities=14% Similarity=0.164 Sum_probs=45.2
Q ss_pred eEEEEcCCChHHHHHHHHHHHCC---CcEEEE-EeCCcccccccC-CceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 101 AVLVTDGDSDIGQMVILSLIVKR---TRIKAL-VKDKRNAMESFG-TYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~G---~~Vral-vR~~~~a~~~~g-~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+|.|. |+|.+|..+++.|++.| ++|... .|++++..+... -.++++.. +..++++.+|.||.+
T Consensus 1 kI~iI-G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~------~~~~~~~~advvila 68 (96)
T PF03807_consen 1 KIGII-GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATAD------DNEEAAQEADVVILA 68 (96)
T ss_dssp EEEEE-STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEESE------EHHHHHHHTSEEEE-
T ss_pred CEEEE-CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccccC------ChHHhhccCCEEEEE
Confidence 46677 89999999999999999 999965 888877643311 11333332 246677899999987
|
It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D .... |
| >TIGR01161 purK phosphoribosylaminoimidazole carboxylase, PurK protein | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.019 Score=51.35 Aligned_cols=65 Identities=12% Similarity=0.151 Sum_probs=52.2
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEE
Q 029118 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSII 168 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVI 168 (198)
+|+|.|+ |.+|+.++..+.+.|++|.++..++......+. -+.+.+|+.|++.+.+..+.||.|.
T Consensus 1 ~igiiG~-gql~~~l~~aa~~lG~~v~~~d~~~~~p~~~~a--d~~~~~~~~d~~~i~~~a~~~dvit 65 (352)
T TIGR01161 1 TVGILGG-GQLGRMLALAARPLGIKVHVLDPDANSPAVQVA--DHVVLAPFFDPAAIRELAESCDVIT 65 (352)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCEEEEECCCCCCChhHhC--ceeEeCCCCCHHHHHHHHhhCCEEE
Confidence 4889998 799999999999999999999876644322222 2456889999999999999998764
|
Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, N5-carboxyaminoimidazole ribonucleotide synthetase, which hydrolyzes ATP and converts AIR to N5-CAIR. PurE converts N5-CAIR to CAIR. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. |
| >TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating) | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.012 Score=51.98 Aligned_cols=66 Identities=11% Similarity=0.041 Sum_probs=49.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
++|.|.| .|.+|..+++.|.++||+|.+..|++++.......++.. ..+++.+.++++.+|.||.+
T Consensus 1 M~Ig~IG-lG~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~~----~~s~~~~~~~~~~~dvIi~~ 66 (298)
T TIGR00872 1 MQLGLIG-LGRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTG----VANLRELSQRLSAPRVVWVM 66 (298)
T ss_pred CEEEEEc-chHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcc----cCCHHHHHhhcCCCCEEEEE
Confidence 3688888 599999999999999999999999887654332222221 24666777778889999877
|
This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle. |
| >PRK00066 ldh L-lactate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.07 Score=47.98 Aligned_cols=66 Identities=14% Similarity=0.253 Sum_probs=47.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCC--cEEEEEeCCcccc----cc-----cCCceEEEEccCCCHHHHHHhhcCcc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAM----ES-----FGTYVESMAGDASNKKFLKTALRGVR 165 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~--~VralvR~~~~a~----~~-----~g~~vevV~GDl~D~~sL~~AL~GvD 165 (198)
...++|.|+|| |.+|.+++..|+..+. ++..+.++.+.+. .. +...+.+..+| .++++++|
T Consensus 4 ~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~~-------~~~~~~ad 75 (315)
T PRK00066 4 KQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAGD-------YSDCKDAD 75 (315)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeCC-------HHHhCCCC
Confidence 45569999998 9999999999998887 7888888765432 11 11233333222 35689999
Q ss_pred EEEEc
Q 029118 166 SIICP 170 (198)
Q Consensus 166 aVIh~ 170 (198)
.||.+
T Consensus 76 ivIit 80 (315)
T PRK00066 76 LVVIT 80 (315)
T ss_pred EEEEe
Confidence 99987
|
|
| >cd08293 PTGR2 Prostaglandin reductase | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.021 Score=49.58 Aligned_cols=70 Identities=11% Similarity=0.109 Sum_probs=46.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcccccc---cCCceEEEEccCCC-HHHHHHhh-cCccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMES---FGTYVESMAGDASN-KKFLKTAL-RGVRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~~~---~g~~vevV~GDl~D-~~sL~~AL-~GvDaVIh~ 170 (198)
++|||+||+|-+|..++..+...|. +|.++++++++.... ++. -+++..+-.+ .+.+.+.. +|+|.||.+
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa-~~vi~~~~~~~~~~i~~~~~~gvd~vid~ 231 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGF-DAAINYKTDNVAERLRELCPEGVDVYFDN 231 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCC-cEEEECCCCCHHHHHHHHCCCCceEEEEC
Confidence 7999999999999999988888998 799998877654321 442 1223221122 12233322 479999987
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid |
| >PRK06718 precorrin-2 dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.021 Score=48.28 Aligned_cols=69 Identities=7% Similarity=0.130 Sum_probs=50.1
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc-ccccC-CceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-MESFG-TYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a-~~~~g-~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+..+++|||.|| |.+|...++.|++.|++|+++.++..+. ..... ..+++..-.+. ..-+.++|.||.+
T Consensus 7 ~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~~~i~~~~~~~~-----~~~l~~adlViaa 77 (202)
T PRK06718 7 DLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTENLVKLVEEGKIRWKQKEFE-----PSDIVDAFLVIAA 77 (202)
T ss_pred EcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhCCCEEEEecCCC-----hhhcCCceEEEEc
Confidence 567789999998 9999999999999999999997654332 12221 23666554433 2347889999887
|
|
| >PRK06522 2-dehydropantoate 2-reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.013 Score=50.42 Aligned_cols=69 Identities=7% Similarity=-0.001 Sum_probs=44.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCC----CHHHHHHhhcCccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDAS----NKKFLKTALRGVRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~----D~~sL~~AL~GvDaVIh~ 170 (198)
++|+|.|+ |.+|..++..|.+.|++|.++.|+++........++.+-.++.. -.....++ +.+|.||.+
T Consensus 1 m~I~IiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~d~vila 73 (304)
T PRK06522 1 MKIAILGA-GAIGGLFGAALAQAGHDVTLVARRGAHLDALNENGLRLEDGEITVPVLAADDPAEL-GPQDLVILA 73 (304)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECChHHHHHHHHcCCcccCCceeecccCCCChhHc-CCCCEEEEe
Confidence 46999997 99999999999999999999999765432221112211011110 01122333 789999887
|
|
| >COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.026 Score=51.99 Aligned_cols=92 Identities=14% Similarity=0.227 Sum_probs=53.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCc---EEEEEeCCcccc--cccCCceEEEEccCCCHHHHHHhhcCccEEEEcChh
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTR---IKALVKDKRNAM--ESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG 173 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~---VralvR~~~~a~--~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a~G 173 (198)
+++|.|.||||.+|+.+++.|-++... +.++....+.-. ..|.....-+.-++.|.. .++++|.||.++.+
T Consensus 1 ~~~VavvGATG~VG~~~~~~L~e~~f~~~~~~~~AS~rSaG~~~~~f~~~~~~v~~~~~~~~----~~~~~Divf~~ag~ 76 (334)
T COG0136 1 KLNVAVLGATGAVGQVLLELLEERHFPFEELVLLASARSAGKKYIEFGGKSIGVPEDAADEF----VFSDVDIVFFAAGG 76 (334)
T ss_pred CcEEEEEeccchHHHHHHHHHHhcCCCcceEEEEecccccCCccccccCccccCcccccccc----ccccCCEEEEeCch
Confidence 367999999999999999988886543 444443222111 112211111222223322 34499999988433
Q ss_pred H----HHHHHHhCCCCeEEEEcccceec
Q 029118 174 F----ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 174 ~----lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
- +...+.++| .+.++-.++||
T Consensus 77 ~~s~~~~p~~~~~G---~~VIdnsSa~R 101 (334)
T COG0136 77 SVSKEVEPKAAEAG---CVVIDNSSAFR 101 (334)
T ss_pred HHHHHHHHHHHHcC---CEEEeCCcccc
Confidence 2 666677788 55566666655
|
|
| >PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.074 Score=41.30 Aligned_cols=95 Identities=15% Similarity=0.167 Sum_probs=62.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcc---c-------ccc---------------cCCc--eEEEEcc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN---A-------MES---------------FGTY--VESMAGD 150 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~---a-------~~~---------------~g~~--vevV~GD 150 (198)
..+|+|.|+ |-+|+.+++.|...|. +++.+..+.-. . ... ..+. ++.+.-+
T Consensus 2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~ 80 (135)
T PF00899_consen 2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK 80 (135)
T ss_dssp T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence 457888886 5699999999999998 56666643211 0 000 1133 4556666
Q ss_pred CCCHHHHHHhhcCccEEEEcC--hh---HHHHHHHhCCCCeEEEEccccee
Q 029118 151 ASNKKFLKTALRGVRSIICPS--EG---FISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 151 l~D~~sL~~AL~GvDaVIh~a--~G---~lldAA~~~GVkRiV~vSS~~Vy 196 (198)
+ +.+.+.+.++++|.||++. .. .+.+.|++.++ .+|+.+..+.+
T Consensus 81 ~-~~~~~~~~~~~~d~vi~~~d~~~~~~~l~~~~~~~~~-p~i~~~~~g~~ 129 (135)
T PF00899_consen 81 I-DEENIEELLKDYDIVIDCVDSLAARLLLNEICREYGI-PFIDAGVNGFY 129 (135)
T ss_dssp C-SHHHHHHHHHTSSEEEEESSSHHHHHHHHHHHHHTT--EEEEEEEETTE
T ss_pred c-ccccccccccCCCEEEEecCCHHHHHHHHHHHHHcCC-CEEEEEeecCE
Confidence 6 5567788889999999882 11 26778898887 67777655543
|
Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A .... |
| >PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.016 Score=54.67 Aligned_cols=65 Identities=17% Similarity=0.058 Sum_probs=49.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
..+++++|.|. |.||+.++..|...|.+|.+..+++.++......+++++ .+.++++++|.||.+
T Consensus 210 l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~G~~v~--------~l~eal~~aDVVI~a 274 (425)
T PRK05476 210 IAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQAAMDGFRVM--------TMEEAAELGDIFVTA 274 (425)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHhcCCEec--------CHHHHHhCCCEEEEC
Confidence 46889999996 899999999999999999999888866533222233322 246778899999887
|
|
| >PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.0077 Score=52.59 Aligned_cols=68 Identities=15% Similarity=0.121 Sum_probs=47.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccccc-------CCceEEEEccC------------CCHHHHHHh
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-------GTYVESMAGDA------------SNKKFLKTA 160 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~-------g~~vevV~GDl------------~D~~sL~~A 160 (198)
++|.|.|+ |.+|..++..|..+|++|++..++++...... ...++ .+.+ .-..++.++
T Consensus 2 ~~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~i~~~~~~~~~ 78 (288)
T PRK09260 2 EKLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQEIASIFEQGVA--RGKLTEAARQAALARLSYSLDLKAA 78 (288)
T ss_pred cEEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHH--cCCCCHHHHHHHHhCeEEeCcHHHh
Confidence 46899998 99999999999999999999999876543211 00110 0111 111346788
Q ss_pred hcCccEEEEc
Q 029118 161 LRGVRSIICP 170 (198)
Q Consensus 161 L~GvDaVIh~ 170 (198)
++++|.||.+
T Consensus 79 ~~~aD~Vi~a 88 (288)
T PRK09260 79 VADADLVIEA 88 (288)
T ss_pred hcCCCEEEEe
Confidence 9999999977
|
|
| >TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.038 Score=46.86 Aligned_cols=83 Identities=16% Similarity=0.186 Sum_probs=59.7
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc-cc-cCCceEEEEccCCCHHHHHHhhcCccEEEEcC-h
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-ES-FGTYVESMAGDASNKKFLKTALRGVRSIICPS-E 172 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~-~~-~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a-~ 172 (198)
+..+++|||.| .|.+|..-++.|++.|.+|+++..+..+.. .. ...+++++.+++... -+++++.||.+. .
T Consensus 6 ~l~gk~vlVvG-gG~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~~~i~~~~~~~~~~-----dl~~~~lVi~at~d 79 (205)
T TIGR01470 6 NLEGRAVLVVG-GGDVALRKARLLLKAGAQLRVIAEELESELTLLAEQGGITWLARCFDAD-----ILEGAFLVIAATDD 79 (205)
T ss_pred EcCCCeEEEEC-cCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHcCCEEEEeCCCCHH-----HhCCcEEEEECCCC
Confidence 45677999998 488999999999999999999976554321 11 123699999998732 368999998772 1
Q ss_pred h----HHHHHHHhCCC
Q 029118 173 G----FISNAGSLKGV 184 (198)
Q Consensus 173 G----~lldAA~~~GV 184 (198)
. .+...|++.|+
T Consensus 80 ~~ln~~i~~~a~~~~i 95 (205)
T TIGR01470 80 EELNRRVAHAARARGV 95 (205)
T ss_pred HHHHHHHHHHHHHcCC
Confidence 1 26677776653
|
This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms. |
| >PLN03154 putative allyl alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.053 Score=48.34 Aligned_cols=91 Identities=13% Similarity=0.109 Sum_probs=55.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc---ccCCceEEEEcc-CCCH-HHHHHhh-cCccEEEEcC
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGD-ASNK-KFLKTAL-RGVRSIICPS 171 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~---~~g~~vevV~GD-l~D~-~sL~~AL-~GvDaVIh~a 171 (198)
++++|||+||+|-+|..++..+...|.+|.+.++++++... .++. -+++..+ -.+. +.+.+.. .|+|.||.+.
T Consensus 158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa-~~vi~~~~~~~~~~~i~~~~~~gvD~v~d~v 236 (348)
T PLN03154 158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGF-DEAFNYKEEPDLDAALKRYFPEGIDIYFDNV 236 (348)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCC-CEEEECCCcccHHHHHHHHCCCCcEEEEECC
Confidence 46799999999999999998888899999998887765432 2342 1223211 1122 2222222 3789999873
Q ss_pred hhH----HHHHHHhCCCCeEEEEc
Q 029118 172 EGF----ISNAGSLKGVQHVILLS 191 (198)
Q Consensus 172 ~G~----lldAA~~~GVkRiV~vS 191 (198)
.+. .+++.+.. .|+|.+.
T Consensus 237 G~~~~~~~~~~l~~~--G~iv~~G 258 (348)
T PLN03154 237 GGDMLDAALLNMKIH--GRIAVCG 258 (348)
T ss_pred CHHHHHHHHHHhccC--CEEEEEC
Confidence 222 33333333 4676654
|
|
| >PRK07417 arogenate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.022 Score=49.62 Aligned_cols=64 Identities=9% Similarity=0.082 Sum_probs=44.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
++|.|.| .|.+|+.+++.|..+|++|.+..|+++........+. +.....+ .++++++|.||.+
T Consensus 1 m~I~IIG-~G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~~g~--~~~~~~~----~~~~~~aDlVila 64 (279)
T PRK07417 1 MKIGIVG-LGLIGGSLGLDLRSLGHTVYGVSRRESTCERAIERGL--VDEASTD----LSLLKDCDLVILA 64 (279)
T ss_pred CeEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCC--cccccCC----HhHhcCCCEEEEc
Confidence 3688998 7999999999999999999999988765433221111 0000111 2357889999987
|
|
| >PRK06849 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.029 Score=50.89 Aligned_cols=38 Identities=11% Similarity=-0.007 Sum_probs=34.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~ 135 (198)
.+++|||||+...+|.++++.|.++|++|.++..++..
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~ 40 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYP 40 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchH
Confidence 46799999999999999999999999999999877643
|
|
| >KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.011 Score=53.56 Aligned_cols=72 Identities=19% Similarity=0.224 Sum_probs=54.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCc-----EEEEEeCCccccc------ccC----CceEEEEccCCCHHHHHHhhc-
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTR-----IKALVKDKRNAME------SFG----TYVESMAGDASNKKFLKTALR- 162 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~-----VralvR~~~~a~~------~~g----~~vevV~GDl~D~~sL~~AL~- 162 (198)
++.+||||++..+|-.++.+|++...+ +.+..|+.+++.+ .+. ..+++|..|+++..++.+|.+
T Consensus 3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d 82 (341)
T KOG1478|consen 3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD 82 (341)
T ss_pred ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence 577999999999999999999997543 4455688776532 122 258899999999999998864
Q ss_pred ------CccEEEEc
Q 029118 163 ------GVRSIICP 170 (198)
Q Consensus 163 ------GvDaVIh~ 170 (198)
-.|.|+..
T Consensus 83 i~~rf~~ld~iylN 96 (341)
T KOG1478|consen 83 IKQRFQRLDYIYLN 96 (341)
T ss_pred HHHHhhhccEEEEc
Confidence 45777654
|
|
| >PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.024 Score=50.13 Aligned_cols=36 Identities=6% Similarity=0.090 Sum_probs=31.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~ 134 (198)
.+++|.|.| +|.+|+.+++.|..+||+|++..|++.
T Consensus 3 ~~m~I~iiG-~G~~G~~lA~~l~~~G~~V~~~~r~~~ 38 (308)
T PRK14619 3 QPKTIAILG-AGAWGSTLAGLASANGHRVRVWSRRSG 38 (308)
T ss_pred CCCEEEEEC-ccHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 356899995 699999999999999999999988753
|
|
| >PTZ00187 succinyl-CoA synthetase alpha subunit; Provisional | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.075 Score=48.55 Aligned_cols=88 Identities=10% Similarity=0.037 Sum_probs=62.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcC--ccEEEEc-ChhH
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG--VRSIICP-SEGF 174 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~G--vDaVIh~-a~G~ 174 (198)
...+|+|-|=||..|+.-+++.++.|-+|++-|-+...-.... ...+-=..++.++.+. +|..+.+ ...+
T Consensus 28 ~~t~v~vqGitg~~g~~h~~~~~~ygt~iv~GV~Pgkgg~~v~-------~~Gvpvy~sv~ea~~~~~~D~avI~VPa~~ 100 (317)
T PTZ00187 28 KNTKVICQGITGKQGTFHTEQAIEYGTKMVGGVNPKKAGTTHL-------KHGLPVFATVKEAKKATGADASVIYVPPPH 100 (317)
T ss_pred CCCeEEEecCCChHHHHHHHHHHHhCCcEEEEECCCCCCceEe-------cCCccccCCHHHHhcccCCCEEEEecCHHH
Confidence 3468999999999999999999999999999994433111111 1223334467777765 8988765 2222
Q ss_pred ---HHHHHHhCCCCeEEEEcc
Q 029118 175 ---ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 175 ---lldAA~~~GVkRiV~vSS 192 (198)
.+..|.++|++.+|.+|+
T Consensus 101 v~dai~Ea~~aGI~~~Viite 121 (317)
T PTZ00187 101 AASAIIEAIEAEIPLVVCITE 121 (317)
T ss_pred HHHHHHHHHHcCCCEEEEECC
Confidence 445566789999999887
|
|
| >TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.056 Score=50.27 Aligned_cols=82 Identities=20% Similarity=0.129 Sum_probs=50.1
Q ss_pred CeEEEEcCCChHHHHHHHHHH-HCCCc---EEEEEeCCcc-cccccCCceEEEEccCCCHHHHHHhhcCccEEEEcChh-
Q 029118 100 DAVLVTDGDSDIGQMVILSLI-VKRTR---IKALVKDKRN-AMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG- 173 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll-~~G~~---VralvR~~~~-a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a~G- 173 (198)
++|.|.||||.+|+.+++.|. ++..+ ++++.-.... ....++ +.+...-++.+. +.+.++|.||.++.+
T Consensus 1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~~s~g~~~~f~-~~~~~v~~~~~~----~~~~~vDivffa~g~~ 75 (366)
T TIGR01745 1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTSQLGQAAPSFG-GTTGTLQDAFDI----DALKALDIIITCQGGD 75 (366)
T ss_pred CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEchhhCCCcCCCC-CCcceEEcCccc----ccccCCCEEEEcCCHH
Confidence 368999999999999999998 55655 4444422111 111221 122233343332 356899999998422
Q ss_pred ---HHHHHHHhCCCCe
Q 029118 174 ---FISNAGSLKGVQH 186 (198)
Q Consensus 174 ---~lldAA~~~GVkR 186 (198)
.+...+.++|..-
T Consensus 76 ~s~~~~p~~~~aG~~~ 91 (366)
T TIGR01745 76 YTNEIYPKLRESGWQG 91 (366)
T ss_pred HHHHHHHHHHhCCCCe
Confidence 2677778888753
|
|
| >PRK06719 precorrin-2 dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.075 Score=43.24 Aligned_cols=81 Identities=11% Similarity=0.100 Sum_probs=52.4
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC-h-
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-E- 172 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a-~- 172 (198)
.+..+++|+|.| .|.+|.+.++.|++.|++|+++..+.......+ ..+++....+... -++++|.||.+. .
T Consensus 9 l~l~~~~vlVvG-GG~va~rka~~Ll~~ga~V~VIsp~~~~~l~~l-~~i~~~~~~~~~~-----dl~~a~lViaaT~d~ 81 (157)
T PRK06719 9 FNLHNKVVVIIG-GGKIAYRKASGLKDTGAFVTVVSPEICKEMKEL-PYITWKQKTFSND-----DIKDAHLIYAATNQH 81 (157)
T ss_pred EEcCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcCccCHHHHhc-cCcEEEecccChh-----cCCCceEEEECCCCH
Confidence 366788899998 489999999999999999998843222111112 2455555444322 268899999872 1
Q ss_pred ---hHHHHHHHhC
Q 029118 173 ---GFISNAGSLK 182 (198)
Q Consensus 173 ---G~lldAA~~~ 182 (198)
-.+...|++.
T Consensus 82 e~N~~i~~~a~~~ 94 (157)
T PRK06719 82 AVNMMVKQAAHDF 94 (157)
T ss_pred HHHHHHHHHHHHC
Confidence 1255556553
|
|
| >TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.07 Score=45.80 Aligned_cols=89 Identities=16% Similarity=0.104 Sum_probs=53.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCc-EEEEEeCCcccc--cccCCceEEEEccCCC-HHHHHHhh--cCccEEEEcC
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNAM--ESFGTYVESMAGDASN-KKFLKTAL--RGVRSIICPS 171 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~-VralvR~~~~a~--~~~g~~vevV~GDl~D-~~sL~~AL--~GvDaVIh~a 171 (198)
+.++|||.|+ |-+|...+..+...|.+ |.++.+++++.. ..++ ++.+. |..+ .+.+.+.. +|+|.||.+.
T Consensus 120 ~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~a~~~G--a~~~i-~~~~~~~~~~~~~~~~g~d~vid~~ 195 (280)
T TIGR03366 120 KGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRRELALSFG--ATALA-EPEVLAERQGGLQNGRGVDVALEFS 195 (280)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcC--CcEec-CchhhHHHHHHHhCCCCCCEEEECC
Confidence 5779999987 89999999888888987 777766665432 2233 22221 2222 22333333 4789999872
Q ss_pred --hhH---HHHHHHhCCCCeEEEEcc
Q 029118 172 --EGF---ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 172 --~G~---lldAA~~~GVkRiV~vSS 192 (198)
... .++..+.. .++|.++.
T Consensus 196 G~~~~~~~~~~~l~~~--G~iv~~G~ 219 (280)
T TIGR03366 196 GATAAVRACLESLDVG--GTAVLAGS 219 (280)
T ss_pred CChHHHHHHHHHhcCC--CEEEEecc
Confidence 222 33444333 47777664
|
This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. |
| >cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.075 Score=45.24 Aligned_cols=90 Identities=17% Similarity=0.074 Sum_probs=54.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCH-HHHHHhh--cCccEEEEcChhH--
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK-KFLKTAL--RGVRSIICPSEGF-- 174 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~-~sL~~AL--~GvDaVIh~a~G~-- 174 (198)
.+|||.|++|-+|..++..+...|.+|.++.++.++.......+++.+. |..+. ..+.+.+ +++|.||.+..+.
T Consensus 148 ~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~ 226 (325)
T cd05280 148 GPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYLKSLGASEVL-DREDLLDESKKPLLKARWAGAIDTVGGDVL 226 (325)
T ss_pred CEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEE-cchhHHHHHHHHhcCCCccEEEECCchHHH
Confidence 5899999999999999998888999999998877553322111222221 22222 1223333 4689999873222
Q ss_pred --HHHHHHhCCCCeEEEEcc
Q 029118 175 --ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 175 --lldAA~~~GVkRiV~vSS 192 (198)
.+++.... .++|.++.
T Consensus 227 ~~~~~~l~~~--g~~v~~g~ 244 (325)
T cd05280 227 ANLLKQTKYG--GVVASCGN 244 (325)
T ss_pred HHHHHhhcCC--CEEEEEec
Confidence 33333333 46776653
|
Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so |
| >cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.17 Score=42.51 Aligned_cols=100 Identities=10% Similarity=0.143 Sum_probs=66.1
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCCc-EEEEEeCCcc---c------------------------ccccCCce--
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRN---A------------------------MESFGTYV-- 144 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~-VralvR~~~~---a------------------------~~~~g~~v-- 144 (198)
......+|+|.|+.| +|.++++.|...|.. ++.+..+.-. . .....+.+
T Consensus 15 ~~L~~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i 93 (198)
T cd01485 15 NKLRSAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKL 93 (198)
T ss_pred HHHhhCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEE
Confidence 355677899999998 999999999999975 6666543210 0 00122444
Q ss_pred EEEEccCCC-HHHHHHhhcCccEEEEcC--hh---HHHHHHHhCCCCeEEEEccccee
Q 029118 145 ESMAGDASN-KKFLKTALRGVRSIICPS--EG---FISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 145 evV~GDl~D-~~sL~~AL~GvDaVIh~a--~G---~lldAA~~~GVkRiV~vSS~~Vy 196 (198)
+.+..++.+ .+...+.+..+|.||.+. .. .+-+.|+++++ .+|+.++.+.|
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~dvVi~~~d~~~~~~~ln~~c~~~~i-p~i~~~~~G~~ 150 (198)
T cd01485 94 SIVEEDSLSNDSNIEEYLQKFTLVIATEENYERTAKVNDVCRKHHI-PFISCATYGLI 150 (198)
T ss_pred EEEecccccchhhHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCC-CEEEEEeecCE
Confidence 445555542 445566788999999882 22 26688899886 66777666554
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol |
| >PRK06901 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.032 Score=51.11 Aligned_cols=76 Identities=5% Similarity=0.050 Sum_probs=47.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEE---EEE---eCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcChh
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIK---ALV---KDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG 173 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~Vr---alv---R~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a~G 173 (198)
.+|.| ||||.+|+.+++.|-+++.+|. .+. |...+. -.|+. -++..-++++ ..++++|.+|. +.+
T Consensus 4 ~~iAi-GATg~VG~~~l~~Leer~fpv~~l~l~~s~~~s~gk~-i~f~g-~~~~V~~l~~-----~~f~~vDia~f-ag~ 74 (322)
T PRK06901 4 LNIAI-AAEFELSEKLLEALEQSDLEIEQISIVEIEPFGEEQG-IRFNN-KAVEQIAPEE-----VEWADFNYVFF-AGK 74 (322)
T ss_pred ceEEE-ecCcHHHHHHHHHHHhcCCchhheeecccccccCCCE-EEECC-EEEEEEECCc-----cCcccCCEEEE-cCH
Confidence 46999 9999999999999988988655 333 323222 12321 2333334433 24689999988 433
Q ss_pred H----HHHHHHhCCC
Q 029118 174 F----ISNAGSLKGV 184 (198)
Q Consensus 174 ~----lldAA~~~GV 184 (198)
- +...+.++|.
T Consensus 75 ~~s~~~ap~a~~aG~ 89 (322)
T PRK06901 75 MAQAEHLAQAAEAGC 89 (322)
T ss_pred HHHHHHHHHHHHCCC
Confidence 2 4555666663
|
|
| >cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.085 Score=45.94 Aligned_cols=90 Identities=14% Similarity=0.159 Sum_probs=57.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCc-EEEEEeCCccccc--ccCCceEEEEccCCC--HHHHHHhhc--CccEEEE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNAME--SFGTYVESMAGDASN--KKFLKTALR--GVRSIIC 169 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~-VralvR~~~~a~~--~~g~~vevV~GDl~D--~~sL~~AL~--GvDaVIh 169 (198)
.++++|||+|+ |-+|..++..+...|.+ |.++.+++++... .++ +..+ .|..+ .+.+.+... ++|.||.
T Consensus 162 ~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~g--a~~~-i~~~~~~~~~~~~~~~~~~~d~vid 237 (339)
T cd08239 162 SGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELAKALG--ADFV-INSGQDDVQEIRELTSGAGADVAIE 237 (339)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhC--CCEE-EcCCcchHHHHHHHhCCCCCCEEEE
Confidence 34789999986 99999999988889998 9888877655322 233 2222 12222 445555554 6899998
Q ss_pred cC--hhH---HHHHHHhCCCCeEEEEcc
Q 029118 170 PS--EGF---ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 170 ~a--~G~---lldAA~~~GVkRiV~vSS 192 (198)
+. ... .++..+..| ++|.++.
T Consensus 238 ~~g~~~~~~~~~~~l~~~G--~~v~~g~ 263 (339)
T cd08239 238 CSGNTAARRLALEAVRPWG--RLVLVGE 263 (339)
T ss_pred CCCCHHHHHHHHHHhhcCC--EEEEEcC
Confidence 72 211 344444444 6776654
|
MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at |
| >PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.03 Score=50.88 Aligned_cols=71 Identities=7% Similarity=-0.054 Sum_probs=48.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-------------cCCceEEEEccCCCHHHHHHhhcCcc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------------FGTYVESMAGDASNKKFLKTALRGVR 165 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-------------~g~~vevV~GDl~D~~sL~~AL~GvD 165 (198)
-++|.|.|+ |-+|+.++..++.+|++|++..++++..... .+.........+.-..++++++++||
T Consensus 7 i~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~aD 85 (321)
T PRK07066 7 IKTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVADAD 85 (321)
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcCCC
Confidence 357999986 9999999999999999999999887542210 00000001111222235778999999
Q ss_pred EEEEc
Q 029118 166 SIICP 170 (198)
Q Consensus 166 aVIh~ 170 (198)
.||-+
T Consensus 86 lViEa 90 (321)
T PRK07066 86 FIQES 90 (321)
T ss_pred EEEEC
Confidence 99977
|
|
| >cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.06 Score=44.82 Aligned_cols=73 Identities=21% Similarity=0.184 Sum_probs=47.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCH---HHHHHhh--cCccEEEEcC
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTAL--RGVRSIICPS 171 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~---~sL~~AL--~GvDaVIh~a 171 (198)
+..+++|+|++|-+|+.++..+...|.+|.++.++.++.......+++.+ .+..+. ..+.+.. .++|.+|++.
T Consensus 139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (323)
T cd05276 139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEACRALGADVA-INYRTEDFAEEVKEATGGRGVDVILDMV 216 (323)
T ss_pred CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCCEE-EeCCchhHHHHHHHHhCCCCeEEEEECC
Confidence 46789999999999999999999999999999887654322111112211 222322 2233333 3689999873
|
PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding |
| >PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.0082 Score=47.78 Aligned_cols=68 Identities=13% Similarity=0.144 Sum_probs=40.0
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEE-eCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALV-KDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~Vralv-R~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
..++.+|-|.|| |.+|.++.+.|..+||+|..+. |+++.+..... . .++ .....+.+.++.+|.||.+
T Consensus 7 ~~~~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~----~-~~~-~~~~~~~~~~~~aDlv~ia 75 (127)
T PF10727_consen 7 QAARLKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAA----F-IGA-GAILDLEEILRDADLVFIA 75 (127)
T ss_dssp -----EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC-------TT------TTGGGCC-SEEEE-
T ss_pred CCCccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCccccccccc----c-ccc-ccccccccccccCCEEEEE
Confidence 567889999998 9999999999999999999884 65543322111 0 001 1112234567888988887
|
This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A. |
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.016 Score=47.38 Aligned_cols=67 Identities=16% Similarity=0.023 Sum_probs=47.1
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
....+++|.|.| .|.||++|++.|..-|.+|.+..|............++ ..++++.++.+|.|+.+
T Consensus 32 ~~l~g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~~~--------~~~l~ell~~aDiv~~~ 98 (178)
T PF02826_consen 32 RELRGKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSPKPEEGADEFGVE--------YVSLDELLAQADIVSLH 98 (178)
T ss_dssp S-STTSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHHTTEE--------ESSHHHHHHH-SEEEE-
T ss_pred cccCCCEEEEEE-EcCCcCeEeeeeecCCceeEEecccCChhhhcccccce--------eeehhhhcchhhhhhhh
Confidence 356788999997 59999999999999999999999987654311111122 22667888999999854
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.028 Score=46.96 Aligned_cols=73 Identities=19% Similarity=0.158 Sum_probs=49.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCH---HHHHHhh--cCccEEEEcC
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTAL--RGVRSIICPS 171 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~---~sL~~AL--~GvDaVIh~a 171 (198)
++++++|+||+|.+|..+++.+.+.|.+|.++++++++.......++..+ .|..++ ..+.+.. +++|.|+.+.
T Consensus 144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 221 (325)
T cd08253 144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVRQAGADAV-FNYRAEDLADRILAATAGQGVDVIIEVL 221 (325)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEE-EeCCCcCHHHHHHHHcCCCceEEEEECC
Confidence 46799999999999999999999999999999987654322211112211 233333 2333433 3789999873
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts |
| >smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.075 Score=40.39 Aligned_cols=67 Identities=12% Similarity=0.125 Sum_probs=41.3
Q ss_pred eEEEEcCCChHHHHHHHHHHH-CCCcEEEEEe-CCcccc--cccCCceE-EEEccCCCHHHHHHhhcCccEEEEc
Q 029118 101 AVLVTDGDSDIGQMVILSLIV-KRTRIKALVK-DKRNAM--ESFGTYVE-SMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~-~G~~VralvR-~~~~a~--~~~g~~ve-vV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
++.|+|++|.+|..+++.|.. .++++.+++. +.+... ....+.+. ++..++. ...+. ..++|.||.+
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~DvV~~~ 72 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAASARSAGKRVSEAGPHLKGEVVLELE-PEDFE--ELAVDIVFLA 72 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcCCCceEEEEEechhhcCcCHHHHCcccccccccccc-cCChh--hcCCCEEEEc
Confidence 478999999999999999988 4889999843 322211 11122221 2222222 22333 3589999987
|
The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase. |
| >TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.011 Score=51.40 Aligned_cols=61 Identities=10% Similarity=-0.014 Sum_probs=44.8
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 102 ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
|.|.| .|.+|+.+++.|++.|++|++..|++++.......+.. ...+..++++.+|.||.+
T Consensus 2 IgvIG-~G~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~-------~~~~~~~~~~~aDivi~~ 62 (291)
T TIGR01505 2 VGFIG-LGIMGSPMSINLAKAGYQLHVTTIGPEVADELLAAGAV-------TAETARQVTEQADVIFTM 62 (291)
T ss_pred EEEEE-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCc-------ccCCHHHHHhcCCEEEEe
Confidence 67776 69999999999999999999999988665432222221 112456778889999876
|
This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism. |
| >PRK11559 garR tartronate semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.018 Score=50.12 Aligned_cols=63 Identities=13% Similarity=0.036 Sum_probs=45.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
++|.|.| .|.+|+.+++.|.+.|++|.+..|++++.......++.+ ..++.++++.+|.||.+
T Consensus 3 ~~IgviG-~G~mG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~g~~~-------~~~~~e~~~~~d~vi~~ 65 (296)
T PRK11559 3 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVYDRNPEAVAEVIAAGAET-------ASTAKAVAEQCDVIITM 65 (296)
T ss_pred ceEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCee-------cCCHHHHHhcCCEEEEe
Confidence 4688997 699999999999999999999988876543322222221 12345667889999876
|
|
| >cd05288 PGDH Prostaglandin dehydrogenases | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.11 Score=44.56 Aligned_cols=90 Identities=13% Similarity=0.104 Sum_probs=56.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc---cCCceEEEEccCCCHH---HHHHhh-cCccEEEEc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKK---FLKTAL-RGVRSIICP 170 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~---~g~~vevV~GDl~D~~---sL~~AL-~GvDaVIh~ 170 (198)
+..+|||+|++|.+|..++..+...|.+|.++++++++.... ++. .+++.. .+.+ .+.+.. .++|.+|.+
T Consensus 145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~-~~~~~~--~~~~~~~~v~~~~~~~~d~vi~~ 221 (329)
T cd05288 145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGF-DAAINY--KTPDLAEALKEAAPDGIDVYFDN 221 (329)
T ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCC-ceEEec--CChhHHHHHHHhccCCceEEEEc
Confidence 457899999999999999999999999999998877543322 331 223322 2222 223222 478999987
Q ss_pred ChhH----HHHHHHhCCCCeEEEEcc
Q 029118 171 SEGF----ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 171 a~G~----lldAA~~~GVkRiV~vSS 192 (198)
..+. .++.++.. .++|.++.
T Consensus 222 ~g~~~~~~~~~~l~~~--G~~v~~g~ 245 (329)
T cd05288 222 VGGEILDAALTLLNKG--GRIALCGA 245 (329)
T ss_pred chHHHHHHHHHhcCCC--ceEEEEee
Confidence 3222 23333333 36776654
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino |
| >PRK11880 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.039 Score=47.24 Aligned_cols=64 Identities=9% Similarity=0.052 Sum_probs=45.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC---CcEEEEEeCCcccccccCC-ceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKR---TRIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G---~~VralvR~~~~a~~~~g~-~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+++|.|.|+ |.+|+.+++.|...| ++|.+..|++++....... ++++. . +..++++.+|.||.+
T Consensus 2 mm~I~iIG~-G~mG~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~g~~~~----~---~~~~~~~~advVil~ 69 (267)
T PRK11880 2 MKKIGFIGG-GNMASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEYGVRAA----T---DNQEAAQEADVVVLA 69 (267)
T ss_pred CCEEEEEec-hHHHHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCCeec----C---ChHHHHhcCCEEEEE
Confidence 467999985 999999999999998 7899999987654322111 23221 1 234556789999877
|
|
| >cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.067 Score=44.90 Aligned_cols=72 Identities=18% Similarity=0.233 Sum_probs=47.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc--cCCceEEEEccCCC-HHHHHHhhc--CccEEEEc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--FGTYVESMAGDASN-KKFLKTALR--GVRSIICP 170 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~--~g~~vevV~GDl~D-~~sL~~AL~--GvDaVIh~ 170 (198)
+..+++|+|++|.+|+.++..+...|.+|.+++++..+.... ++. ..++..+..+ ...+.+... ++|.+|.+
T Consensus 144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 220 (328)
T cd08268 144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDALLALGA-AHVIVTDEEDLVAEVLRITGGKGVDVVFDP 220 (328)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCC-CEEEecCCccHHHHHHHHhCCCCceEEEEC
Confidence 456899999999999999999999999999998876543221 221 1222222212 222333333 68999987
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.11 Score=46.07 Aligned_cols=63 Identities=13% Similarity=0.220 Sum_probs=45.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC--CcEEEEEeCCcccccc----------cCCceEEEEccCCCHHHHHHhhcCccEE
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAMES----------FGTYVESMAGDASNKKFLKTALRGVRSI 167 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G--~~VralvR~~~~a~~~----------~g~~vevV~GDl~D~~sL~~AL~GvDaV 167 (198)
++|.|.|+ |.+|+.++..|+.+| ++|.++.|+++++... .+..+.+..+ + .+.++++|.|
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~---~----~~~l~~aDIV 72 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAG---D----YSDCKDADIV 72 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcC---C----HHHhCCCCEE
Confidence 37999996 999999999999999 6899999988764311 0122333322 2 2357999999
Q ss_pred EEc
Q 029118 168 ICP 170 (198)
Q Consensus 168 Ih~ 170 (198)
|.+
T Consensus 73 Iit 75 (306)
T cd05291 73 VIT 75 (306)
T ss_pred EEc
Confidence 987
|
L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine |
| >TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.092 Score=44.01 Aligned_cols=92 Identities=17% Similarity=0.167 Sum_probs=55.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCH---HHHHHhh--cCccEEEEcCh
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTAL--RGVRSIICPSE 172 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~---~sL~~AL--~GvDaVIh~a~ 172 (198)
+..+++|+|++|.+|..++..+...|.+|.++.++++........++..+ .+..++ ..+.+.. +++|.+|.+..
T Consensus 139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~~i~~~~ 217 (325)
T TIGR02824 139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAACEALGADIA-INYREEDFVEVVKAETGGKGVDVILDIVG 217 (325)
T ss_pred CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEE-EecCchhHHHHHHHHcCCCCeEEEEECCc
Confidence 46799999999999999999999999999999887654321111112211 122222 2233333 36899998732
Q ss_pred hH----HHHHHHhCCCCeEEEEcc
Q 029118 173 GF----ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 173 G~----lldAA~~~GVkRiV~vSS 192 (198)
+. .++..... .++|.++.
T Consensus 218 ~~~~~~~~~~l~~~--g~~v~~g~ 239 (325)
T TIGR02824 218 GSYLNRNIKALALD--GRIVQIGF 239 (325)
T ss_pred hHHHHHHHHhhccC--cEEEEEec
Confidence 22 23333333 47776653
|
Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized. |
| >PRK09880 L-idonate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.093 Score=46.24 Aligned_cols=90 Identities=11% Similarity=0.028 Sum_probs=54.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcccccccCCceEEEEccCCC--HHHHHHhhcCccEEEEcC--h
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASN--KKFLKTALRGVRSIICPS--E 172 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~~~~g~~vevV~GDl~D--~~sL~~AL~GvDaVIh~a--~ 172 (198)
+.++|||+|+ |-+|...+..+...|. +|.++.+++++.......+++.+ .|..+ ...+.+...++|.||-+. .
T Consensus 169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~v-i~~~~~~~~~~~~~~g~~D~vid~~G~~ 246 (343)
T PRK09880 169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKL-VNPQNDDLDHYKAEKGYFDVSFEVSGHP 246 (343)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEE-ecCCcccHHHHhccCCCCCEEEECCCCH
Confidence 5779999986 9999999988888898 58888888765432221223322 13332 222222223489999873 2
Q ss_pred hH---HHHHHHhCCCCeEEEEc
Q 029118 173 GF---ISNAGSLKGVQHVILLS 191 (198)
Q Consensus 173 G~---lldAA~~~GVkRiV~vS 191 (198)
.+ .+++.+.. .++|.++
T Consensus 247 ~~~~~~~~~l~~~--G~iv~~G 266 (343)
T PRK09880 247 SSINTCLEVTRAK--GVMVQVG 266 (343)
T ss_pred HHHHHHHHHhhcC--CEEEEEc
Confidence 22 34444443 4677665
|
|
| >PLN00203 glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.029 Score=54.15 Aligned_cols=70 Identities=13% Similarity=0.180 Sum_probs=52.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcccccccC--CceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~~~~g--~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
...++|+|.|+ |.+|+.+++.|...|. +|.+..|+++++..... +++.+. +...+.+.+++.++|.||.+
T Consensus 264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~---~~~~~dl~~al~~aDVVIsA 336 (519)
T PLN00203 264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEII---YKPLDEMLACAAEADVVFTS 336 (519)
T ss_pred CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceE---eecHhhHHHHHhcCCEEEEc
Confidence 55778999999 9999999999999996 69999998877543321 122222 22334567889999999987
|
|
| >COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.048 Score=50.50 Aligned_cols=91 Identities=12% Similarity=0.100 Sum_probs=52.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHC-CCcEEEEEeCCc--ccccccCCceE-E--EEccCCCHHHHHHhhcCccEEEEc-C
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKR--NAMESFGTYVE-S--MAGDASNKKFLKTALRGVRSIICP-S 171 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~-G~~VralvR~~~--~a~~~~g~~ve-v--V~GDl~D~~sL~~AL~GvDaVIh~-a 171 (198)
+.+|.|.||||++|..+++.|..+ ..++.....+.. +......++.. . .....-|++.+ ..++||+||.+ .
T Consensus 2 ~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~~~~g~~~~~~~p~l~g~~~l~~~~~~~~~~--~~~~~DvvFlalP 79 (349)
T COG0002 2 MIKVGIVGASGYTGLELLRLLAGHPDVELILISSRERAGKPVSDVHPNLRGLVDLPFQTIDPEKI--ELDECDVVFLALP 79 (349)
T ss_pred CceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeechhhcCCchHHhCcccccccccccccCChhhh--hcccCCEEEEecC
Confidence 578999999999999999988765 345555543221 11111112211 1 22222333333 56789999987 4
Q ss_pred hhH---HHHHHHhCCCCeEEEEcc
Q 029118 172 EGF---ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 172 ~G~---lldAA~~~GVkRiV~vSS 192 (198)
.|. ++....+.|++ ||=+|.
T Consensus 80 hg~s~~~v~~l~~~g~~-VIDLSa 102 (349)
T COG0002 80 HGVSAELVPELLEAGCK-VIDLSA 102 (349)
T ss_pred chhHHHHHHHHHhCCCe-EEECCc
Confidence 443 45555566766 666663
|
|
| >cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.07 Score=45.97 Aligned_cols=91 Identities=11% Similarity=0.093 Sum_probs=53.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc-Chh-H
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-SEG-F 174 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~-a~G-~ 174 (198)
.+..+|||+|+ |.+|+.+++.+...|++|.+++++.++.......+.+.+..+ .+.......-.++|.||.+ ..+ .
T Consensus 161 ~~~~~vlI~g~-g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~d~vi~~~~~~~~ 238 (330)
T cd08245 161 RPGERVAVLGI-GGLGHLAVQYARAMGFETVAITRSPDKRELARKLGADEVVDS-GAELDEQAAAGGADVILVTVVSGAA 238 (330)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCcEEecc-CCcchHHhccCCCCEEEECCCcHHH
Confidence 34568999976 559999999999999999999987765322211112222211 1222222223578999987 222 2
Q ss_pred ---HHHHHHhCCCCeEEEEc
Q 029118 175 ---ISNAGSLKGVQHVILLS 191 (198)
Q Consensus 175 ---lldAA~~~GVkRiV~vS 191 (198)
.++..+..| ++|.++
T Consensus 239 ~~~~~~~l~~~G--~~i~~~ 256 (330)
T cd08245 239 AEAALGGLRRGG--RIVLVG 256 (330)
T ss_pred HHHHHHhcccCC--EEEEEC
Confidence 334434444 677665
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an |
| >cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.038 Score=50.01 Aligned_cols=64 Identities=13% Similarity=0.005 Sum_probs=44.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC-------cEEEEEeCCcc--cc----ccc------CCceEEEEccCCCHHHHHHh
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRT-------RIKALVKDKRN--AM----ESF------GTYVESMAGDASNKKFLKTA 160 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~-------~VralvR~~~~--a~----~~~------g~~vevV~GDl~D~~sL~~A 160 (198)
.+|.|+||+|++|.+++..|+.+|. ++..+..+... +. ... ..++++.. ...++
T Consensus 3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~-------~~~~~ 75 (322)
T cd01338 3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVITD-------DPNVA 75 (322)
T ss_pred eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEec-------CcHHH
Confidence 4899999999999999999988875 68888774322 21 110 01222221 22578
Q ss_pred hcCccEEEEc
Q 029118 161 LRGVRSIICP 170 (198)
Q Consensus 161 L~GvDaVIh~ 170 (198)
++++|.||.+
T Consensus 76 ~~daDivvit 85 (322)
T cd01338 76 FKDADWALLV 85 (322)
T ss_pred hCCCCEEEEe
Confidence 9999999987
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.095 Score=46.47 Aligned_cols=90 Identities=20% Similarity=0.247 Sum_probs=55.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCc-EEEEEeCCccccc--ccCCceEEEEccCCCH---HHHHHhhc--CccEEE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNAME--SFGTYVESMAGDASNK---KFLKTALR--GVRSII 168 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~-VralvR~~~~a~~--~~g~~vevV~GDl~D~---~sL~~AL~--GvDaVI 168 (198)
.++++|||+|+ |-+|..++..+...|.+ |.++.+++++... .++. -+++ |..+. +.+.+... |+|.||
T Consensus 175 ~~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga-~~~i--~~~~~~~~~~i~~~~~~~g~d~vi 250 (358)
T TIGR03451 175 KRGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGA-THTV--NSSGTDPVEAIRALTGGFGADVVI 250 (358)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCC-ceEE--cCCCcCHHHHHHHHhCCCCCCEEE
Confidence 35779999985 99999999988889985 8888887765422 2332 1223 23322 33444443 689999
Q ss_pred EcC--hhH---HHHHHHhCCCCeEEEEcc
Q 029118 169 CPS--EGF---ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 169 h~a--~G~---lldAA~~~GVkRiV~vSS 192 (198)
.+. ..+ .+++++.. .++|.+..
T Consensus 251 d~~g~~~~~~~~~~~~~~~--G~iv~~G~ 277 (358)
T TIGR03451 251 DAVGRPETYKQAFYARDLA--GTVVLVGV 277 (358)
T ss_pred ECCCCHHHHHHHHHHhccC--CEEEEECC
Confidence 873 222 33333433 47777654
|
Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione. |
| >cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.031 Score=45.69 Aligned_cols=93 Identities=11% Similarity=0.055 Sum_probs=56.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHh----hcCccEEEEcCh
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA----LRGVRSIICPSE 172 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~A----L~GvDaVIh~a~ 172 (198)
.++.+|||+|+++ +|+.+++.+...|.+|.++++++++.......+... ..|..+....... -.++|.||.+..
T Consensus 133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~~~ 210 (271)
T cd05188 133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAKELGADH-VIDYKEEDLEEELRLTGGGGADVVIDAVG 210 (271)
T ss_pred CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCce-eccCCcCCHHHHHHHhcCCCCCEEEECCC
Confidence 4567899999999 999999999999999999998765432211111111 1233333332221 257899998732
Q ss_pred h-H----HHHHHHhCCCCeEEEEccc
Q 029118 173 G-F----ISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 173 G-~----lldAA~~~GVkRiV~vSS~ 193 (198)
+ . .++.++.. .++|.++..
T Consensus 211 ~~~~~~~~~~~l~~~--G~~v~~~~~ 234 (271)
T cd05188 211 GPETLAQALRLLRPG--GRIVVVGGT 234 (271)
T ss_pred CHHHHHHHHHhcccC--CEEEEEccC
Confidence 2 2 33444333 467766643
|
The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro |
| >TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.087 Score=49.51 Aligned_cols=85 Identities=15% Similarity=0.183 Sum_probs=55.7
Q ss_pred CCCeEEEEcCC---ChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc--Ch
Q 029118 98 ARDAVLVTDGD---SDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP--SE 172 (198)
Q Consensus 98 ~~~~ILVTGAT---GfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~--a~ 172 (198)
..++|+|.||| |.+|+.+++.|++.|++=.+..-||... +..+ +. -..+++++-..+|.++.+ ..
T Consensus 6 ~p~siavvGaS~~~~~~g~~~~~~l~~~gf~g~v~~Vnp~~~-~i~G--~~-------~~~sl~~lp~~~Dlavi~vp~~ 75 (447)
T TIGR02717 6 NPKSVAVIGASRDPGKVGYAIMKNLIEGGYKGKIYPVNPKAG-EILG--VK-------AYPSVLEIPDPVDLAVIVVPAK 75 (447)
T ss_pred CCCEEEEEccCCCCCchHHHHHHHHHhCCCCCcEEEECCCCC-ccCC--cc-------ccCCHHHCCCCCCEEEEecCHH
Confidence 35679999998 7799999999999998433333355432 2223 11 112344444567888765 22
Q ss_pred --hHHHHHHHhCCCCeEEEEcc
Q 029118 173 --GFISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 173 --G~lldAA~~~GVkRiV~vSS 192 (198)
..+++.|.+.|++.+|.+|+
T Consensus 76 ~~~~~l~e~~~~gv~~~vi~s~ 97 (447)
T TIGR02717 76 YVPQVVEECGEKGVKGAVVITA 97 (447)
T ss_pred HHHHHHHHHHhcCCCEEEEECC
Confidence 22677778889999988876
|
Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff. |
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.017 Score=54.08 Aligned_cols=73 Identities=12% Similarity=0.150 Sum_probs=53.5
Q ss_pred cccCCCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 94 ~~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+.+..+++|||.|+ |.+|+.+++.|...|. ++.+..|+.+++...... +. .+.+...+.+.+++..+|.||++
T Consensus 176 ~~~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~-~~--~~~~~~~~~l~~~l~~aDiVI~a 249 (414)
T PRK13940 176 LDNISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSA-FR--NASAHYLSELPQLIKKADIIIAA 249 (414)
T ss_pred hcCccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHH-hc--CCeEecHHHHHHHhccCCEEEEC
Confidence 34566789999998 9999999999999995 688888987765433211 10 01233345778889999999998
|
|
| >COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.051 Score=50.72 Aligned_cols=66 Identities=12% Similarity=0.137 Sum_probs=53.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEE
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSI 167 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaV 167 (198)
+++|.|.| .|.+|++++.....-|++|+++.-+++....... -.++..+++|++.+++..+.||+|
T Consensus 1 ~~tvgIlG-GGQLgrMm~~aa~~lG~~v~vLdp~~~~PA~~va--~~~i~~~~dD~~al~ela~~~DVi 66 (375)
T COG0026 1 MKTVGILG-GGQLGRMMALAAARLGIKVIVLDPDADAPAAQVA--DRVIVAAYDDPEALRELAAKCDVI 66 (375)
T ss_pred CCeEEEEc-CcHHHHHHHHHHHhcCCEEEEecCCCCCchhhcc--cceeecCCCCHHHHHHHHhhCCEE
Confidence 36788887 5999999999999999999999755544322222 367888999999999999999998
|
|
| >PLN02688 pyrroline-5-carboxylate reductase | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.026 Score=48.29 Aligned_cols=63 Identities=11% Similarity=0.034 Sum_probs=44.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC----cEEEE-EeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRT----RIKAL-VKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~----~Vral-vR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
++|.+.| .|.+|..+++.|+++|+ +|.+. .|++++.......++++. . +..++++.+|.||.+
T Consensus 1 ~kI~~IG-~G~mG~a~a~~L~~~g~~~~~~i~v~~~r~~~~~~~~~~~g~~~~----~---~~~e~~~~aDvVil~ 68 (266)
T PLN02688 1 FRVGFIG-AGKMAEAIARGLVASGVVPPSRISTADDSNPARRDVFQSLGVKTA----A---SNTEVVKSSDVIILA 68 (266)
T ss_pred CeEEEEC-CcHHHHHHHHHHHHCCCCCcceEEEEeCCCHHHHHHHHHcCCEEe----C---ChHHHHhcCCEEEEE
Confidence 4688887 99999999999999998 88888 777665433222234331 1 234567788999877
|
|
| >PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed | Back alignment and domain information |
|---|
Probab=95.47 E-value=0.038 Score=48.66 Aligned_cols=65 Identities=9% Similarity=-0.005 Sum_probs=44.4
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+|.|.| .|.+|+.+++.|+++|++|.+..|++++.......++++ ..+++.+.+.+.++|.||.+
T Consensus 2 ~Ig~IG-lG~MG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~----~~~~~e~~~~~~~~dvvi~~ 66 (301)
T PRK09599 2 QLGMIG-LGRMGGNMARRLLRGGHEVVGYDRNPEAVEALAEEGATG----ADSLEELVAKLPAPRVVWLM 66 (301)
T ss_pred EEEEEc-ccHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCee----cCCHHHHHhhcCCCCEEEEE
Confidence 677886 899999999999999999999999876654322222332 23444444444456777655
|
|
| >PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.47 E-value=0.04 Score=48.89 Aligned_cols=71 Identities=14% Similarity=0.071 Sum_probs=46.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccccc--CCceEEEEc-----cCCCHHHHHHhhcCccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAG-----DASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~--g~~vevV~G-----Dl~D~~sL~~AL~GvDaVIh~ 170 (198)
.++|.|.| .|.+|..++..|..+||+|++..|+++...... +.+...+.+ .+.-.+++.++++.+|.||.+
T Consensus 4 ~m~I~iIG-~G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~aD~Vi~~ 81 (328)
T PRK14618 4 GMRVAVLG-AGAWGTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEALAGADFAVVA 81 (328)
T ss_pred CCeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHHcCCCEEEEE
Confidence 46799996 599999999999999999999999875432111 000000001 011122455678899999987
|
|
| >PLN02740 Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Probab=95.44 E-value=0.13 Score=46.18 Aligned_cols=94 Identities=12% Similarity=0.074 Sum_probs=55.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcccccccCCceEEEEccCCCH-----HHHHHhhc-CccEEEE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNK-----KFLKTALR-GVRSIIC 169 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~~~~g~~vevV~GDl~D~-----~sL~~AL~-GvDaVIh 169 (198)
.+.++|||+|+ |-+|..++..+...|. +|.++.+++++.......+++.+. |..++ +.+.+... |+|.||.
T Consensus 197 ~~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i-~~~~~~~~~~~~v~~~~~~g~dvvid 274 (381)
T PLN02740 197 QAGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGITDFI-NPKDSDKPVHERIREMTGGGVDYSFE 274 (381)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHcCCcEEE-ecccccchHHHHHHHHhCCCCCEEEE
Confidence 34678999996 9999999998888998 599888877654322111232221 33321 23443333 6999998
Q ss_pred cC--hhHHHHHHH--hCCCCeEEEEcc
Q 029118 170 PS--EGFISNAGS--LKGVQHVILLSQ 192 (198)
Q Consensus 170 ~a--~G~lldAA~--~~GVkRiV~vSS 192 (198)
+. ..++-++.. ..|-.++|.++.
T Consensus 275 ~~G~~~~~~~a~~~~~~g~G~~v~~G~ 301 (381)
T PLN02740 275 CAGNVEVLREAFLSTHDGWGLTVLLGI 301 (381)
T ss_pred CCCChHHHHHHHHhhhcCCCEEEEEcc
Confidence 73 223322222 222356777664
|
|
| >PRK08762 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=95.40 E-value=0.16 Score=46.43 Aligned_cols=95 Identities=12% Similarity=0.128 Sum_probs=62.5
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCC-------------------cccc------cccCCceE--EE
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK-------------------RNAM------ESFGTYVE--SM 147 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~-------------------~~a~------~~~g~~ve--vV 147 (198)
.....+|+|.|+ |-+|++++..|...|. +++++.++. .++. ....+.++ .+
T Consensus 132 ~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~ 210 (376)
T PRK08762 132 RLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAV 210 (376)
T ss_pred HHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence 456778999976 6799999999999997 577777651 1111 11224444 44
Q ss_pred EccCCCHHHHHHhhcCccEEEEcCh-----hHHHHHHHhCCCCeEEEEccc
Q 029118 148 AGDASNKKFLKTALRGVRSIICPSE-----GFISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 148 ~GDl~D~~sL~~AL~GvDaVIh~a~-----G~lldAA~~~GVkRiV~vSS~ 193 (198)
...++ .+.+.+.++++|.||.+.. -.+-++|++.++ .+|+.+..
T Consensus 211 ~~~~~-~~~~~~~~~~~D~Vv~~~d~~~~r~~ln~~~~~~~i-p~i~~~~~ 259 (376)
T PRK08762 211 QERVT-SDNVEALLQDVDVVVDGADNFPTRYLLNDACVKLGK-PLVYGAVF 259 (376)
T ss_pred eccCC-hHHHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCC-CEEEEEec
Confidence 44443 4567778899999998831 126677888885 45665543
|
|
| >PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=95.37 E-value=0.1 Score=48.11 Aligned_cols=81 Identities=14% Similarity=0.057 Sum_probs=53.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc-cccc---CCceEEEEccCCCHHHHHHhhcCccEEEEc-C--
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-MESF---GTYVESMAGDASNKKFLKTALRGVRSIICP-S-- 171 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a-~~~~---g~~vevV~GDl~D~~sL~~AL~GvDaVIh~-a-- 171 (198)
.++|+|+|+ |.+|..+++.|.++|++|.+..+++... ...+ ..++++..+...+ ..+.++|.||.. .
T Consensus 5 ~~~~~v~G~-g~~G~~~a~~l~~~g~~v~~~d~~~~~~~~~~l~~~~~gi~~~~g~~~~-----~~~~~~d~vv~spgi~ 78 (445)
T PRK04308 5 NKKILVAGL-GGTGISMIAYLRKNGAEVAAYDAELKPERVAQIGKMFDGLVFYTGRLKD-----ALDNGFDILALSPGIS 78 (445)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCchhHHHHhhccCCcEEEeCCCCH-----HHHhCCCEEEECCCCC
Confidence 568999998 4799999999999999999998655431 1111 1357777665432 134688999976 2
Q ss_pred hh-HHHHHHHhCCCC
Q 029118 172 EG-FISNAGSLKGVQ 185 (198)
Q Consensus 172 ~G-~lldAA~~~GVk 185 (198)
.. -.+.+|+++|++
T Consensus 79 ~~~p~~~~a~~~~i~ 93 (445)
T PRK04308 79 ERQPDIEAFKQNGGR 93 (445)
T ss_pred CCCHHHHHHHHcCCc
Confidence 11 245555555543
|
|
| >TIGR01759 MalateDH-SF1 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=95.36 E-value=0.071 Score=48.37 Aligned_cols=65 Identities=15% Similarity=0.045 Sum_probs=44.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC-------cEEEEEeCCc--ccc----ccc------CCceEEEEccCCCHHHHHH
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRT-------RIKALVKDKR--NAM----ESF------GTYVESMAGDASNKKFLKT 159 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~-------~VralvR~~~--~a~----~~~------g~~vevV~GDl~D~~sL~~ 159 (198)
..+|.|+||+|++|++++..|+.++. ++..+.+++. ++. ... ..++.+. ....+
T Consensus 3 p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~-------~~~~~ 75 (323)
T TIGR01759 3 PVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVAT-------TDPEE 75 (323)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEe-------cChHH
Confidence 45899999999999999999988874 7888877542 121 000 0112221 12357
Q ss_pred hhcCccEEEEc
Q 029118 160 ALRGVRSIICP 170 (198)
Q Consensus 160 AL~GvDaVIh~ 170 (198)
+++++|.||.+
T Consensus 76 ~~~daDvVVit 86 (323)
T TIGR01759 76 AFKDVDAALLV 86 (323)
T ss_pred HhCCCCEEEEe
Confidence 89999999987
|
This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms. |
| >PRK07877 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.36 E-value=0.062 Score=53.88 Aligned_cols=94 Identities=15% Similarity=0.226 Sum_probs=65.2
Q ss_pred cccCCCCeEEEEcCCChHHHHHHHHHHHCCC--cEEEEEeCCc---ccc---------------------cccCCc--eE
Q 029118 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKR---NAM---------------------ESFGTY--VE 145 (198)
Q Consensus 94 ~~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~--~VralvR~~~---~a~---------------------~~~g~~--ve 145 (198)
-+...+.+|+|.|+ | +|++++..|...|. +++.+..+.- +.. ...+++ |+
T Consensus 102 Q~~L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~ 179 (722)
T PRK07877 102 QERLGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVE 179 (722)
T ss_pred HHHHhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEE
Confidence 45677889999999 8 99999999999995 7777765421 100 011233 55
Q ss_pred EEEccCCCHHHHHHhhcCccEEEEcCh--hH---HHHHHHhCCCCeEEEEc
Q 029118 146 SMAGDASNKKFLKTALRGVRSIICPSE--GF---ISNAGSLKGVQHVILLS 191 (198)
Q Consensus 146 vV~GDl~D~~sL~~AL~GvDaVIh~a~--G~---lldAA~~~GVkRiV~vS 191 (198)
.+...++ ++.+.+.+.++|.||.+.+ .+ +-++|.++++. +|+-+
T Consensus 180 ~~~~~i~-~~n~~~~l~~~DlVvD~~D~~~~R~~ln~~a~~~~iP-~i~~~ 228 (722)
T PRK07877 180 VFTDGLT-EDNVDAFLDGLDVVVEECDSLDVKVLLREAARARRIP-VLMAT 228 (722)
T ss_pred EEeccCC-HHHHHHHhcCCCEEEECCCCHHHHHHHHHHHHHcCCC-EEEEc
Confidence 5666665 7888999999999998832 22 66788888765 44444
|
|
| >cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=95.31 E-value=0.077 Score=44.71 Aligned_cols=74 Identities=15% Similarity=0.152 Sum_probs=48.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCC-HHHHHHhhcCccEEEEcC
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN-KKFLKTALRGVRSIICPS 171 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D-~~sL~~AL~GvDaVIh~a 171 (198)
++.+|||.||+|.+|+.++..+...|.+|.++++++++.......+++.+..+-.+ ...+.+.=+++|.|+.+.
T Consensus 142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~d~vl~~~ 216 (320)
T cd08243 142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALLKELGADEVVIDDGAIAEQLRAAPGGFDKVLELV 216 (320)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEecCccHHHHHHHhCCCceEEEECC
Confidence 46799999999999999999999999999999887755432211223333222111 222332224789999873
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.077 Score=46.38 Aligned_cols=35 Identities=9% Similarity=0.108 Sum_probs=31.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~ 135 (198)
++|.|.|+ |.+|..++..|..+|++|++..++++.
T Consensus 4 ~kIaViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~ 38 (287)
T PRK08293 4 KNVTVAGA-GVLGSQIAFQTAFHGFDVTIYDISDEA 38 (287)
T ss_pred cEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHH
Confidence 57999985 999999999999999999999988754
|
|
| >PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.25 E-value=0.029 Score=49.50 Aligned_cols=63 Identities=10% Similarity=0.066 Sum_probs=45.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
++|.|.| .|.+|..+++.|+.+||+|.+..|++++.......++. ...+..++++++|.||.+
T Consensus 2 ~~Ig~IG-lG~mG~~mA~~l~~~G~~V~v~d~~~~~~~~~~~~g~~-------~~~s~~~~~~~aDvVi~~ 64 (296)
T PRK15461 2 AAIAFIG-LGQMGSPMASNLLKQGHQLQVFDVNPQAVDALVDKGAT-------PAASPAQAAAGAEFVITM 64 (296)
T ss_pred CeEEEEe-eCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHcCCc-------ccCCHHHHHhcCCEEEEe
Confidence 3677775 89999999999999999999999988765433221221 122345677888888866
|
|
| >PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional | Back alignment and domain information |
|---|
Probab=95.21 E-value=0.072 Score=47.97 Aligned_cols=64 Identities=16% Similarity=0.136 Sum_probs=48.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
..+++|.|.| .|.||+.+++.|...|++|.+..|.++... +++.+ ....++.++++.+|.|+++
T Consensus 134 l~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~~~~-----~~~~~----~~~~~l~e~l~~aDvvv~~ 197 (312)
T PRK15469 134 REDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRKSWP-----GVQSF----AGREELSAFLSQTRVLINL 197 (312)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCCC-----Cceee----cccccHHHHHhcCCEEEEC
Confidence 4567888886 899999999999999999999987554321 12222 1345789999999999865
|
|
| >cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases | Back alignment and domain information |
|---|
Probab=95.20 E-value=0.037 Score=50.06 Aligned_cols=69 Identities=20% Similarity=0.146 Sum_probs=44.2
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC--cEEEEEeCCccc--ccccC--CceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNA--MESFG--TYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~--~VralvR~~~~a--~~~~g--~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
++|.|+||+|++|++++-.|..++. ++..+..+.... ..+.. ....+.... ..+++.++++++|.||.+
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~~a~g~alDL~~~~~~~~i~~~~--~~~~~y~~~~daDivvit 75 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIVNTPGVAADLSHINTPAKVTGYL--GPEELKKALKGADVVVIP 75 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecCccceeehHhHhCCCcceEEEec--CCCchHHhcCCCCEEEEe
Confidence 4799999999999999999888884 677777661111 11111 112222110 112356789999999987
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=95.20 E-value=0.045 Score=47.55 Aligned_cols=38 Identities=16% Similarity=0.216 Sum_probs=33.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA 136 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a 136 (198)
..++++|+|+ |.+|+.++..|...|++|.+..|+++++
T Consensus 116 ~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~ 153 (270)
T TIGR00507 116 PNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKA 153 (270)
T ss_pred cCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 4568999998 8999999999999999999999987654
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=95.18 E-value=0.11 Score=48.36 Aligned_cols=66 Identities=9% Similarity=-0.025 Sum_probs=47.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc-c----ccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-A----MESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~-a----~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
.+++|+|.|+ |.+|..+++.|.++|++|.++.+++.. . ......++++..++-.. ...++|.||..
T Consensus 15 ~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~------~~~~~D~Vv~s 85 (480)
T PRK01438 15 QGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGPGPT------LPEDTDLVVTS 85 (480)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc------ccCCCCEEEEC
Confidence 4568999996 889999999999999999999765421 1 11222457887765332 34578988875
|
|
| >cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=95.17 E-value=0.064 Score=45.90 Aligned_cols=71 Identities=14% Similarity=0.071 Sum_probs=47.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCC--HHHHHHhh-cCccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN--KKFLKTAL-RGVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D--~~sL~~AL-~GvDaVIh~ 170 (198)
..+|||+|++|.+|..++..+.+.|.+|.++++++++.......+++.+ .|..+ ...+.+.. .++|.||.+
T Consensus 147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~~~~~~d~vld~ 220 (326)
T cd08289 147 QGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLKKLGAKEV-IPREELQEESIKPLEKQRWAGAVDP 220 (326)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHHHcCCCEE-EcchhHHHHHHHhhccCCcCEEEEC
Confidence 4699999999999999999999999999999988765432211223222 11222 23333332 468999977
|
yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH |
| >cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase) | Back alignment and domain information |
|---|
Probab=95.17 E-value=0.17 Score=45.24 Aligned_cols=91 Identities=10% Similarity=0.043 Sum_probs=54.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcccccccCCceEEEEccCCCH---HHHHHhhc-CccEEEEcC-
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTALR-GVRSIICPS- 171 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~~~~g~~vevV~GDl~D~---~sL~~AL~-GvDaVIh~a- 171 (198)
+.++|||+|+ |-+|..++..+...|. +|.++.+++++......-+++.+ .|..+. +.+.+... ++|.||.+.
T Consensus 191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~-i~~~~~~~~~~i~~~~~~g~d~vid~~G 268 (371)
T cd08281 191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATAT-VNAGDPNAVEQVRELTGGGVDYAFEMAG 268 (371)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCceE-eCCCchhHHHHHHHHhCCCCCEEEECCC
Confidence 4678999985 9999999988888998 58888887765432111122221 223332 33443333 689999873
Q ss_pred -hhH---HHHHHHhCCCCeEEEEcc
Q 029118 172 -EGF---ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 172 -~G~---lldAA~~~GVkRiV~vSS 192 (198)
... .+++++..| ++|.++.
T Consensus 269 ~~~~~~~~~~~l~~~G--~iv~~G~ 291 (371)
T cd08281 269 SVPALETAYEITRRGG--TTVTAGL 291 (371)
T ss_pred ChHHHHHHHHHHhcCC--EEEEEcc
Confidence 222 344444444 6776654
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd |
| >PRK13403 ketol-acid reductoisomerase; Provisional | Back alignment and domain information |
|---|
Probab=95.16 E-value=0.054 Score=49.93 Aligned_cols=69 Identities=12% Similarity=-0.012 Sum_probs=50.5
Q ss_pred ccccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 93 EFPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 93 ~~~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+.+....++|.|.|- |.+|+.+++.|...|++|++..|...........++++ .++.++++.+|.|+.+
T Consensus 10 ~~~~LkgKtVGIIG~-GsIG~amA~nL~d~G~~ViV~~r~~~s~~~A~~~G~~v--------~sl~Eaak~ADVV~ll 78 (335)
T PRK13403 10 NVELLQGKTVAVIGY-GSQGHAQAQNLRDSGVEVVVGVRPGKSFEVAKADGFEV--------MSVSEAVRTAQVVQML 78 (335)
T ss_pred ChhhhCcCEEEEEeE-cHHHHHHHHHHHHCcCEEEEEECcchhhHHHHHcCCEE--------CCHHHHHhcCCEEEEe
Confidence 456777889999985 99999999999999999999887533221111122332 1578899999999865
|
|
| >PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.16 E-value=0.027 Score=49.68 Aligned_cols=37 Identities=11% Similarity=0.024 Sum_probs=33.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA 136 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a 136 (198)
..+|.|.|+ |.+|..++..|+.+|++|++..++++..
T Consensus 5 ~~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~ 41 (286)
T PRK07819 5 IQRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELA 41 (286)
T ss_pred ccEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHH
Confidence 357999987 9999999999999999999999988754
|
|
| >KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=95.15 E-value=0.039 Score=51.01 Aligned_cols=72 Identities=10% Similarity=0.141 Sum_probs=56.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccccc-CCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~-g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
|++.+.|+|+.| +|..-++...+-|++|.++.+..++..+.+ ..+.+++..-..|++.++++..-.|.++|+
T Consensus 181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~~dg~~~~ 253 (360)
T KOG0023|consen 181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMKAIMKTTDGGIDT 253 (360)
T ss_pred CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHHHHHHHHhhcCccee
Confidence 678899999999 998888888889999999999864433332 245787777777999888888766666655
|
|
| >PTZ00075 Adenosylhomocysteinase; Provisional | Back alignment and domain information |
|---|
Probab=95.15 E-value=0.064 Score=51.52 Aligned_cols=66 Identities=15% Similarity=0.081 Sum_probs=49.7
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
...+++++|.| -|.||+.+++.|...|.+|.+..+++.+.......+++++ .+.++++.+|.||.+
T Consensus 251 ~LaGKtVgVIG-~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~~G~~~~--------~leell~~ADIVI~a 316 (476)
T PTZ00075 251 MIAGKTVVVCG-YGDVGKGCAQALRGFGARVVVTEIDPICALQAAMEGYQVV--------TLEDVVETADIFVTA 316 (476)
T ss_pred CcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHhcCceec--------cHHHHHhcCCEEEEC
Confidence 45788999999 5689999999999999999999888765422212234432 356788999999876
|
|
| >COG2130 Putative NADP-dependent oxidoreductases [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.13 E-value=0.063 Score=49.38 Aligned_cols=97 Identities=13% Similarity=0.062 Sum_probs=61.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccC-CceEEEEccCCC---HHHHHHhh-cCccEEEEcChh
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASN---KKFLKTAL-RGVRSIICPSEG 173 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g-~~vevV~GDl~D---~~sL~~AL-~GvDaVIh~a~G 173 (198)
+.+|+|++|+|-+|+.+......+|.+|+.++=.+++...... .++. ...|..+ .+.|.+|+ +|+|..|-+.-|
T Consensus 151 GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD-~~idyk~~d~~~~L~~a~P~GIDvyfeNVGg 229 (340)
T COG2130 151 GETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFD-AGIDYKAEDFAQALKEACPKGIDVYFENVGG 229 (340)
T ss_pred CCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCc-eeeecCcccHHHHHHHHCCCCeEEEEEcCCc
Confidence 6699999999999988777667789999999977776432211 1111 1123333 23445554 789999977555
Q ss_pred HHHHHHHh--CCCCeEEEEccccee
Q 029118 174 FISNAGSL--KGVQHVILLSQGAVV 196 (198)
Q Consensus 174 ~lldAA~~--~GVkRiV~vSS~~Vy 196 (198)
.++||+.. +--.||+....++-|
T Consensus 230 ~v~DAv~~~ln~~aRi~~CG~IS~Y 254 (340)
T COG2130 230 EVLDAVLPLLNLFARIPVCGAISQY 254 (340)
T ss_pred hHHHHHHHhhccccceeeeeehhhc
Confidence 56666532 233566665554444
|
|
| >PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional | Back alignment and domain information |
|---|
Probab=95.12 E-value=0.23 Score=42.75 Aligned_cols=91 Identities=10% Similarity=0.055 Sum_probs=56.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc--cCCceEEEEccCCC-HHHHHHhhc--CccEEEEcCh
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--FGTYVESMAGDASN-KKFLKTALR--GVRSIICPSE 172 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~--~g~~vevV~GDl~D-~~sL~~AL~--GvDaVIh~a~ 172 (198)
+..+++|.||+|.+|+.++..+...|.+|.++++++++.... ++. .+++..+-.+ .+.+.++.. ++|.|+.+..
T Consensus 140 ~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~ 218 (327)
T PRK10754 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRAKKAGA-WQVINYREENIVERVKEITGGKKVRVVYDSVG 218 (327)
T ss_pred CCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCC-CEEEcCCCCcHHHHHHHHcCCCCeEEEEECCc
Confidence 467999999999999999999999999999998776543221 232 2333322222 233445444 6898887732
Q ss_pred hH----HHHHHHhCCCCeEEEEc
Q 029118 173 GF----ISNAGSLKGVQHVILLS 191 (198)
Q Consensus 173 G~----lldAA~~~GVkRiV~vS 191 (198)
+. .++..... .|+|.++
T Consensus 219 ~~~~~~~~~~l~~~--g~~v~~g 239 (327)
T PRK10754 219 KDTWEASLDCLQRR--GLMVSFG 239 (327)
T ss_pred HHHHHHHHHHhccC--CEEEEEc
Confidence 22 23333333 3677664
|
|
| >cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2 | Back alignment and domain information |
|---|
Probab=95.10 E-value=0.095 Score=44.71 Aligned_cols=72 Identities=8% Similarity=0.142 Sum_probs=48.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCC---HHHHHHhhc--CccEEEEc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN---KKFLKTALR--GVRSIICP 170 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D---~~sL~~AL~--GvDaVIh~ 170 (198)
+..+|||.||+|-+|+.++..+.+.|.+|.+.+++.++.......+++.+. +..+ ...+.+... |+|.||.+
T Consensus 139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~i~~~~~~~~~d~v~d~ 215 (324)
T cd08292 139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRALGIGPVV-STEQPGWQDKVREAAGGAPISVALDS 215 (324)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHhcCCCEEE-cCCCchHHHHHHHHhCCCCCcEEEEC
Confidence 467899999999999999999999999999998876543222111232221 2222 233444443 69999987
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina |
| >PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=95.10 E-value=0.12 Score=48.85 Aligned_cols=84 Identities=14% Similarity=0.099 Sum_probs=55.0
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc-C---
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-S--- 171 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~-a--- 171 (198)
-.++++|+|.| .|.+|..+++.|..+|++|.+..+++.........+++++.++.. .+.++++|.||.. .
T Consensus 9 ~~~~~~v~V~G-~G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l~~~g~~~~~~~~~-----~~~l~~~D~VV~SpGi~~ 82 (488)
T PRK03369 9 LLPGAPVLVAG-AGVTGRAVLAALTRFGARPTVCDDDPDALRPHAERGVATVSTSDA-----VQQIADYALVVTSPGFRP 82 (488)
T ss_pred ccCCCeEEEEc-CCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHhCCCEEEcCcch-----HhHhhcCCEEEECCCCCC
Confidence 34567899999 778999999999999999999886544322222234666654431 2345678988875 2
Q ss_pred hhHHHHHHHhCCCC
Q 029118 172 EGFISNAGSLKGVQ 185 (198)
Q Consensus 172 ~G~lldAA~~~GVk 185 (198)
..-.+.+|++.|++
T Consensus 83 ~~p~~~~a~~~gi~ 96 (488)
T PRK03369 83 TAPVLAAAAAAGVP 96 (488)
T ss_pred CCHHHHHHHHCCCc
Confidence 12256666666644
|
|
| >PRK05442 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.10 E-value=0.068 Score=48.57 Aligned_cols=66 Identities=15% Similarity=0.035 Sum_probs=43.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-------cEEEEEeCCcc--cc----cc------cCCceEEEEccCCCHHHHH
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-------RIKALVKDKRN--AM----ES------FGTYVESMAGDASNKKFLK 158 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~-------~VralvR~~~~--a~----~~------~g~~vevV~GDl~D~~sL~ 158 (198)
+..+|.|+||+|++|.+++-.|+..+. ++..+++++.. +. .. +..++.+.. ...
T Consensus 3 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~~-------~~y 75 (326)
T PRK05442 3 APVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVITD-------DPN 75 (326)
T ss_pred CCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEec-------ChH
Confidence 345899999999999999998887664 67777764421 11 00 011222221 225
Q ss_pred HhhcCccEEEEc
Q 029118 159 TALRGVRSIICP 170 (198)
Q Consensus 159 ~AL~GvDaVIh~ 170 (198)
++++++|.||.+
T Consensus 76 ~~~~daDiVVit 87 (326)
T PRK05442 76 VAFKDADVALLV 87 (326)
T ss_pred HHhCCCCEEEEe
Confidence 789999999987
|
|
| >cd08301 alcohol_DH_plants Plant alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.08 E-value=0.2 Score=44.57 Aligned_cols=92 Identities=15% Similarity=0.127 Sum_probs=55.6
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcccccc--cCCceEEEEccCCC--H---HHHHHhhc-CccEE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMES--FGTYVESMAGDASN--K---KFLKTALR-GVRSI 167 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~~~--~g~~vevV~GDl~D--~---~sL~~AL~-GvDaV 167 (198)
.++.+|||.|+ |.+|..++..+...|. +|.++++++++.... ++. .+++ |..+ . ..+.+... ++|.|
T Consensus 186 ~~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga-~~~i--~~~~~~~~~~~~v~~~~~~~~d~v 261 (369)
T cd08301 186 KKGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGV-TEFV--NPKDHDKPVQEVIAEMTGGGVDYS 261 (369)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCC-ceEE--cccccchhHHHHHHHHhCCCCCEE
Confidence 35779999985 9999999998888998 799998887654322 332 1222 2222 1 22333332 68999
Q ss_pred EEcC-hh-H---HHHHHHhCCCCeEEEEccc
Q 029118 168 ICPS-EG-F---ISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 168 Ih~a-~G-~---lldAA~~~GVkRiV~vSS~ 193 (198)
|.+. .. . .+++++. +-.++|.++..
T Consensus 262 id~~G~~~~~~~~~~~~~~-~~g~~v~~g~~ 291 (369)
T cd08301 262 FECTGNIDAMISAFECVHD-GWGVTVLLGVP 291 (369)
T ss_pred EECCCChHHHHHHHHHhhc-CCCEEEEECcC
Confidence 9873 22 2 2333332 22578777653
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the |
| >PRK04207 glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.08 E-value=0.11 Score=47.27 Aligned_cols=92 Identities=12% Similarity=0.058 Sum_probs=54.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHC-CCcEEEEEeC-Ccccc---cccCC--------ceEEEE-ccCCCHHHHHHhhcCc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKD-KRNAM---ESFGT--------YVESMA-GDASNKKFLKTALRGV 164 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~-G~~VralvR~-~~~a~---~~~g~--------~vevV~-GDl~D~~sL~~AL~Gv 164 (198)
+.+|.|.|+ |.||+.+++.+.++ +.+|.++... ++... ...+- ..+.+. .++.=...+.+.+.++
T Consensus 1 ~ikVaI~G~-GrIGr~va~al~~~~d~eLvav~d~~~~~~~~la~~~G~~~~~~~~~~~~~~~~~~i~V~~~~~el~~~v 79 (341)
T PRK04207 1 MIKVGVNGY-GTIGKRVADAVAAQPDMELVGVAKTKPDYEARVAVEKGYPLYVADPEREKAFEEAGIPVAGTIEDLLEKA 79 (341)
T ss_pred CeEEEEECC-CHHHHHHHHHHhcCCCcEEEEEECCChHHHHHHHHhcCCCccccCccccccccCCceEEcCChhHhhccC
Confidence 357999999 99999999988754 6788888742 21111 00110 000000 0010011234556789
Q ss_pred cEEEEcC-hh---HHHHHHHhCCCCeEEEEcc
Q 029118 165 RSIICPS-EG---FISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 165 DaVIh~a-~G---~lldAA~~~GVkRiV~vSS 192 (198)
|.||.+. .. ..++.+.++| +++|+.++
T Consensus 80 DVVIdaT~~~~~~e~a~~~~~aG-k~VI~~~~ 110 (341)
T PRK04207 80 DIVVDATPGGVGAKNKELYEKAG-VKAIFQGG 110 (341)
T ss_pred CEEEECCCchhhHHHHHHHHHCC-CEEEEcCC
Confidence 9999873 11 2677788889 77887766
|
|
| >PLN02928 oxidoreductase family protein | Back alignment and domain information |
|---|
Probab=95.07 E-value=0.065 Score=48.88 Aligned_cols=74 Identities=9% Similarity=0.035 Sum_probs=50.4
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-c---CCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-F---GTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-~---g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
...++++.|.|- |.||+.+++.|...|.+|.+..|+..+.... + ...++.+........++.++++.+|.|+.+
T Consensus 156 ~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~ 233 (347)
T PLN02928 156 TLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLC 233 (347)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEEEC
Confidence 466789999986 9999999999999999999998764321110 0 011111111112456889999999999865
|
|
| >COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.07 E-value=0.22 Score=44.65 Aligned_cols=87 Identities=15% Similarity=0.051 Sum_probs=49.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC-CcEEEE-EeCCcccc-----cccC-CceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKAL-VKDKRNAM-----ESFG-TYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G-~~Vral-vR~~~~a~-----~~~g-~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+++|+|.||+|..|+.+++.+.+.. +++.+. .|++.... +..+ ..+.+.. .| .+..+...+|.+|-.
T Consensus 2 ~iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~~~~~g~d~ge~~g~~~~gv~v---~~--~~~~~~~~~DV~IDF 76 (266)
T COG0289 2 MIKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDRPGSLSLGSDAGELAGLGLLGVPV---TD--DLLLVKADADVLIDF 76 (266)
T ss_pred CceEEEEcCCChHHHHHHHHHhcCCCceEEEEEecCCccccccchhhhccccccCcee---ec--chhhcccCCCEEEEC
Confidence 5789999999999999999887764 565554 45543221 1111 0111111 11 144455666777754
Q ss_pred --ChhH--HHHHHHhCCCCeEEEE
Q 029118 171 --SEGF--ISNAGSLKGVQHVILL 190 (198)
Q Consensus 171 --a~G~--lldAA~~~GVkRiV~v 190 (198)
..++ .++.|.+++++.+|=+
T Consensus 77 T~P~~~~~~l~~~~~~~~~lVIGT 100 (266)
T COG0289 77 TTPEATLENLEFALEHGKPLVIGT 100 (266)
T ss_pred CCchhhHHHHHHHHHcCCCeEEEC
Confidence 2222 5666666665555533
|
|
| >cd05282 ETR_like 2-enoyl thioester reductase-like | Back alignment and domain information |
|---|
Probab=95.06 E-value=0.29 Score=41.59 Aligned_cols=94 Identities=15% Similarity=0.120 Sum_probs=56.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCce-EEEEccC-CCHHHHHHhh--cCccEEEEcC-
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYV-ESMAGDA-SNKKFLKTAL--RGVRSIICPS- 171 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~v-evV~GDl-~D~~sL~~AL--~GvDaVIh~a- 171 (198)
.+..++||.|++|.+|+.++..+.+.|.+|.+++++.++.......++ +++..+- .....+.+.. +++|.|+.+.
T Consensus 137 ~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g 216 (323)
T cd05282 137 PPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEELKALGADEVIDSSPEDLAQRVKEATGGAGARLALDAVG 216 (323)
T ss_pred CCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHHHhcCCCEEecccchhHHHHHHHHhcCCCceEEEECCC
Confidence 356799999999999999999999999999999887654322111112 2222211 1122334343 4789999872
Q ss_pred -hhH--HHHHHHhCCCCeEEEEcc
Q 029118 172 -EGF--ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 172 -~G~--lldAA~~~GVkRiV~vSS 192 (198)
... .++..+.. .++|.++.
T Consensus 217 ~~~~~~~~~~l~~~--g~~v~~g~ 238 (323)
T cd05282 217 GESATRLARSLRPG--GTLVNYGL 238 (323)
T ss_pred CHHHHHHHHhhCCC--CEEEEEcc
Confidence 111 33333332 46776653
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman |
| >cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 | Back alignment and domain information |
|---|
Probab=95.05 E-value=0.34 Score=40.66 Aligned_cols=98 Identities=10% Similarity=0.106 Sum_probs=62.5
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCCc-EEEEEeCCcc---c----------------------ccccCCc--eEE
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRN---A----------------------MESFGTY--VES 146 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~-VralvR~~~~---a----------------------~~~~g~~--vev 146 (198)
+.....+|+|.|+.| +|.++++.|...|.. ++.+..+.-. . .....+. ++.
T Consensus 17 ~~L~~s~VlIiG~gg-lG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~ 95 (197)
T cd01492 17 KRLRSARILLIGLKG-LGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSV 95 (197)
T ss_pred HHHHhCcEEEEcCCH-HHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEE
Confidence 355677899999877 999999999999975 6666533210 0 0112233 344
Q ss_pred EEccCCCHHHHHHhhcCccEEEEcC--hhH---HHHHHHhCCCCeEEEEccccee
Q 029118 147 MAGDASNKKFLKTALRGVRSIICPS--EGF---ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 147 V~GDl~D~~sL~~AL~GvDaVIh~a--~G~---lldAA~~~GVkRiV~vSS~~Vy 196 (198)
....+.+ ...+-++++|.||.+. ... +-++|++.++ .+|+.++.+-|
T Consensus 96 ~~~~~~~--~~~~~~~~~dvVi~~~~~~~~~~~ln~~c~~~~i-p~i~~~~~G~~ 147 (197)
T cd01492 96 DTDDISE--KPEEFFSQFDVVVATELSRAELVKINELCRKLGV-KFYATGVHGLF 147 (197)
T ss_pred EecCccc--cHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCC-CEEEEEecCCE
Confidence 4444442 2344578999999872 222 6678899997 46666665544
|
Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain. |
| >PRK06444 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.05 E-value=0.078 Score=45.06 Aligned_cols=28 Identities=7% Similarity=0.075 Sum_probs=26.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEE
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIK 127 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~Vr 127 (198)
++|.|.||+|.+|+.+++.+.+.|+.|.
T Consensus 1 ~~~~iiG~~G~mG~~~~~~~~~~g~~v~ 28 (197)
T PRK06444 1 MMEIIIGKNGRLGRVLCSILDDNGLGVY 28 (197)
T ss_pred CEEEEEecCCcHHHHHHHHHHhCCCEEE
Confidence 4799999999999999999999999985
|
|
| >PRK07502 cyclohexadienyl dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.01 E-value=0.053 Score=47.74 Aligned_cols=66 Identities=12% Similarity=0.019 Sum_probs=45.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC--cEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~--~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
.++|.|.| .|.+|..+++.|...|+ +|.+..|+++........++... . .....++++++|.||.+
T Consensus 6 ~~~I~IIG-~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~---~--~~~~~~~~~~aDvViia 73 (307)
T PRK07502 6 FDRVALIG-IGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDR---V--TTSAAEAVKGADLVILC 73 (307)
T ss_pred CcEEEEEe-eCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCce---e--cCCHHHHhcCCCEEEEC
Confidence 46799998 99999999999999885 78888887754332211111100 1 11345677899999987
|
|
| >TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family | Back alignment and domain information |
|---|
Probab=95.01 E-value=0.18 Score=43.19 Aligned_cols=72 Identities=14% Similarity=0.027 Sum_probs=46.4
Q ss_pred CCCC-eEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCce-EEEEccCCCHH-HHHHhh-cCccEEEEc
Q 029118 97 EARD-AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYV-ESMAGDASNKK-FLKTAL-RGVRSIICP 170 (198)
Q Consensus 97 ~~~~-~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~v-evV~GDl~D~~-sL~~AL-~GvDaVIh~ 170 (198)
.+.. +|||.|++|.+|..+++.+...|.+|.++++++++.......++ +++. ..+.. .+.... .++|.++.+
T Consensus 143 ~~~~~~vlI~g~~g~vg~~~~~la~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~~~d~vld~ 218 (323)
T TIGR02823 143 TPEDGPVLVTGATGGVGSLAVAILSKLGYEVVASTGKAEEEDYLKELGASEVID--REDLSPPGKPLEKERWAGAVDT 218 (323)
T ss_pred CCCCceEEEEcCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcEEEc--cccHHHHHHHhcCCCceEEEEC
Confidence 3456 99999999999999999999999999988877654322111112 2222 22322 232222 257888887
|
This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc. |
| >cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA | Back alignment and domain information |
|---|
Probab=95.00 E-value=0.22 Score=42.37 Aligned_cols=97 Identities=12% Similarity=0.069 Sum_probs=62.1
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCCc-EEEEEeCC---cccc----------------------cccCCc--eEE
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDK---RNAM----------------------ESFGTY--VES 146 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~-VralvR~~---~~a~----------------------~~~g~~--vev 146 (198)
....+.+|+|.| .|-+|+++++.|...|.. +++++.+. +... ....+. ++.
T Consensus 17 ~~L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~ 95 (228)
T cd00757 17 EKLKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEA 95 (228)
T ss_pred HHHhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEE
Confidence 356677899999 566999999999999974 44443221 0000 011233 455
Q ss_pred EEccCCCHHHHHHhhcCccEEEEcC--h---hHHHHHHHhCCCCeEEEEcccc
Q 029118 147 MAGDASNKKFLKTALRGVRSIICPS--E---GFISNAGSLKGVQHVILLSQGA 194 (198)
Q Consensus 147 V~GDl~D~~sL~~AL~GvDaVIh~a--~---G~lldAA~~~GVkRiV~vSS~~ 194 (198)
+...+ +.+.+.+.+.++|.||.+. . -.+-++|.+.++ .+|+.+..+
T Consensus 96 ~~~~i-~~~~~~~~~~~~DvVi~~~d~~~~r~~l~~~~~~~~i-p~i~~g~~g 146 (228)
T cd00757 96 YNERL-DAENAEELIAGYDLVLDCTDNFATRYLINDACVKLGK-PLVSGAVLG 146 (228)
T ss_pred eccee-CHHHHHHHHhCCCEEEEcCCCHHHHHHHHHHHHHcCC-CEEEEEecc
Confidence 55555 3566778889999999882 1 126777888885 556655443
|
Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). |
| >TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=94.91 E-value=0.048 Score=49.28 Aligned_cols=68 Identities=19% Similarity=0.187 Sum_probs=44.1
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCC--cEEEEEeCCcccc--cccC--CceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 101 AVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAM--ESFG--TYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~G~--~VralvR~~~~a~--~~~g--~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+|.|+||+|+||.+++..|..++. +++.+.+++.... .+.. ....+.... +.+.+.++++|+|.||.+
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~g~a~DL~~~~~~~~i~~~~--~~~~~~~~~~daDivvit 74 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAAGVAADLSHIPTAASVKGFS--GEEGLENALKGADVVVIP 74 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCcEEEchhhcCCcCceEEEec--CCCchHHHcCCCCEEEEe
Confidence 589999999999999999888875 6888877662111 1111 112222101 112356799999999987
|
Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases. |
| >TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=94.83 E-value=0.24 Score=44.34 Aligned_cols=93 Identities=18% Similarity=0.098 Sum_probs=54.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcccccccCCceEEEEccCCC--H---HHHHHhhc-CccEEEEc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASN--K---KFLKTALR-GVRSIICP 170 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~~~~g~~vevV~GDl~D--~---~sL~~AL~-GvDaVIh~ 170 (198)
+.++|||+|+ |.+|...+..+...|. +|.++++++++.......+++.+ .|..+ . +.+.++.. |+|.||.+
T Consensus 185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~-i~~~~~~~~~~~~v~~~~~~g~d~vid~ 262 (368)
T TIGR02818 185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDC-VNPNDYDKPIQEVIVEITDGGVDYSFEC 262 (368)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeE-EcccccchhHHHHHHHHhCCCCCEEEEC
Confidence 4678999986 9999999988888898 69888887765432211122221 12322 1 23333333 79999987
Q ss_pred C--hhHHHHHHH--hCCCCeEEEEcc
Q 029118 171 S--EGFISNAGS--LKGVQHVILLSQ 192 (198)
Q Consensus 171 a--~G~lldAA~--~~GVkRiV~vSS 192 (198)
. ...+.++.. +.+-.++|.++.
T Consensus 263 ~G~~~~~~~~~~~~~~~~G~~v~~g~ 288 (368)
T TIGR02818 263 IGNVNVMRAALECCHKGWGESIIIGV 288 (368)
T ss_pred CCCHHHHHHHHHHhhcCCCeEEEEec
Confidence 3 222222222 223357777764
|
The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols. |
| >PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=94.81 E-value=0.028 Score=45.61 Aligned_cols=74 Identities=11% Similarity=-0.058 Sum_probs=49.9
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEcc-------------------CCCHHH
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGD-------------------ASNKKF 156 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GD-------------------l~D~~s 156 (198)
..+..+|+||| +|.+|...++.|...|++|..+..++.............+.-+ ......
T Consensus 17 ~~~p~~vvv~G-~G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (168)
T PF01262_consen 17 GVPPAKVVVTG-AGRVGQGAAEIAKGLGAEVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESN 95 (168)
T ss_dssp EE-T-EEEEES-TSHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHH
T ss_pred CCCCeEEEEEC-CCHHHHHHHHHHhHCCCEEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHH
Confidence 34556788888 8999999999999999999999987654432222223333333 234567
Q ss_pred HHHhhcCccEEEEc
Q 029118 157 LKTALRGVRSIICP 170 (198)
Q Consensus 157 L~~AL~GvDaVIh~ 170 (198)
+.+.++.+|.||..
T Consensus 96 f~~~i~~~d~vI~~ 109 (168)
T PF01262_consen 96 FAEFIAPADIVIGN 109 (168)
T ss_dssp HHHHHHH-SEEEEH
T ss_pred HHHHHhhCcEEeee
Confidence 88888999999975
|
4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A .... |
| >PRK13243 glyoxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=94.79 E-value=0.065 Score=48.51 Aligned_cols=65 Identities=17% Similarity=0.057 Sum_probs=48.0
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+..+++|.|.|- |.||+.+++.|...|.+|.+..|++...... ..+++ ..++.++++.+|.|+.+
T Consensus 147 ~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~-~~~~~--------~~~l~ell~~aDiV~l~ 211 (333)
T PRK13243 147 DVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRKPEAEK-ELGAE--------YRPLEELLRESDFVSLH 211 (333)
T ss_pred CCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCChhhHH-HcCCE--------ecCHHHHHhhCCEEEEe
Confidence 456789999997 9999999999999999999988765432110 00111 23577889999999865
|
|
| >PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.78 E-value=0.079 Score=48.07 Aligned_cols=38 Identities=8% Similarity=0.131 Sum_probs=34.6
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCC
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 133 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~ 133 (198)
+..++.|.|.|.+|.+|+.++..|+++|++|.+..|..
T Consensus 156 ~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t 193 (301)
T PRK14194 156 DLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRS 193 (301)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCC
Confidence 66788999999999999999999999999999996654
|
|
| >cd08300 alcohol_DH_class_III class III alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=94.78 E-value=0.28 Score=43.72 Aligned_cols=92 Identities=17% Similarity=0.137 Sum_probs=55.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCccccc--ccCCceEEEEccCCCH-----HHHHHhh-cCccEE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAME--SFGTYVESMAGDASNK-----KFLKTAL-RGVRSI 167 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~~--~~g~~vevV~GDl~D~-----~sL~~AL-~GvDaV 167 (198)
.+.++|||+|+ |.+|...+..+...|. +|.++++++++... .++ ++.+ .|..+. +.+.+.. .|+|.|
T Consensus 185 ~~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lG--a~~~-i~~~~~~~~~~~~v~~~~~~g~d~v 260 (368)
T cd08300 185 EPGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFG--ATDC-VNPKDHDKPIQQVLVEMTDGGVDYT 260 (368)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcC--CCEE-EcccccchHHHHHHHHHhCCCCcEE
Confidence 34779999975 9999999998888999 69888888765432 233 2221 233322 2222332 279999
Q ss_pred EEcC--hhHHHHHHH--hCCCCeEEEEcc
Q 029118 168 ICPS--EGFISNAGS--LKGVQHVILLSQ 192 (198)
Q Consensus 168 Ih~a--~G~lldAA~--~~GVkRiV~vSS 192 (198)
|.+. ...+.++.. +.+-.|+|.++.
T Consensus 261 id~~g~~~~~~~a~~~l~~~~G~~v~~g~ 289 (368)
T cd08300 261 FECIGNVKVMRAALEACHKGWGTSVIIGV 289 (368)
T ss_pred EECCCChHHHHHHHHhhccCCCeEEEEcc
Confidence 9873 223222222 223358887754
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim |
| >PRK06223 malate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=94.77 E-value=0.05 Score=47.85 Aligned_cols=70 Identities=10% Similarity=0.129 Sum_probs=44.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCccccccc----CC-ceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESF----GT-YVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~~~~----g~-~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+++|.|.|| |.+|..++..|...|. +|+++.++++.+.... .. ........+.-.... ++++++|.||.+
T Consensus 2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~-~~~~~aDiVii~ 77 (307)
T PRK06223 2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDY-EDIAGSDVVVIT 77 (307)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCH-HHHCCCCEEEEC
Confidence 578999999 9999999999888875 8999998776542110 00 000000011101122 468999999976
|
|
| >PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated | Back alignment and domain information |
|---|
Probab=94.76 E-value=0.067 Score=50.79 Aligned_cols=71 Identities=11% Similarity=-0.004 Sum_probs=47.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccC---------CceEE----EEccCCCHHHHHHhhcCcc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG---------TYVES----MAGDASNKKFLKTALRGVR 165 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g---------~~vev----V~GDl~D~~sL~~AL~GvD 165 (198)
-++|.|. |+|.+|+.++..|+.+|++|++..|+++....... .+..- ..+.+.=.+++.+++++||
T Consensus 4 i~kIavI-G~G~MG~~iA~~la~~G~~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~~~~~~ea~~~aD 82 (495)
T PRK07531 4 IMKAACI-GGGVIGGGWAARFLLAGIDVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTFCASLAEAVAGAD 82 (495)
T ss_pred cCEEEEE-CcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEeeCCHHHHhcCCC
Confidence 3578888 58999999999999999999999998765422100 00000 0111111235678899999
Q ss_pred EEEEc
Q 029118 166 SIICP 170 (198)
Q Consensus 166 aVIh~ 170 (198)
.||.+
T Consensus 83 ~Viea 87 (495)
T PRK07531 83 WIQES 87 (495)
T ss_pred EEEEc
Confidence 99977
|
|
| >PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=94.75 E-value=0.19 Score=44.10 Aligned_cols=71 Identities=11% Similarity=0.083 Sum_probs=46.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccccc-------CC----ceE-EEEccCCCHHHHHHhhcCccE
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-------GT----YVE-SMAGDASNKKFLKTALRGVRS 166 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~-------g~----~ve-vV~GDl~D~~sL~~AL~GvDa 166 (198)
.++|.|.|+ |.+|..++..|+.+|++|+++.++++...... +. ... ...+.+.-..+..++++++|.
T Consensus 4 ~~~I~vIGa-G~mG~~iA~~l~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~aDl 82 (311)
T PRK06130 4 IQNLAIIGA-GTMGSGIAALFARKGLQVVLIDVMEGALERARGVIERALGVYAPLGIASAGMGRIRMEAGLAAAVSGADL 82 (311)
T ss_pred ccEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHhhhcccHHHHhhceEEeCCHHHHhccCCE
Confidence 357999976 99999999999999999999998775532211 10 000 000001111235567899999
Q ss_pred EEEc
Q 029118 167 IICP 170 (198)
Q Consensus 167 VIh~ 170 (198)
||.+
T Consensus 83 Vi~a 86 (311)
T PRK06130 83 VIEA 86 (311)
T ss_pred EEEe
Confidence 9977
|
|
| >PRK12921 2-dehydropantoate 2-reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.73 E-value=0.16 Score=43.88 Aligned_cols=69 Identities=14% Similarity=0.041 Sum_probs=43.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEE--ccC----CCHHHHHHhhcCccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMA--GDA----SNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~--GDl----~D~~sL~~AL~GvDaVIh~ 170 (198)
++|+|.| .|.+|..++..|.++||+|.++.| ++........++.+.. ++. .-..+..++.+.+|.||.+
T Consensus 1 mkI~IiG-~G~iG~~~a~~L~~~g~~V~~~~r-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vila 75 (305)
T PRK12921 1 MRIAVVG-AGAVGGTFGGRLLEAGRDVTFLVR-PKRAKALRERGLVIRSDHGDAVVPGPVITDPEELTGPFDLVILA 75 (305)
T ss_pred CeEEEEC-CCHHHHHHHHHHHHCCCceEEEec-HHHHHHHHhCCeEEEeCCCeEEecceeecCHHHccCCCCEEEEE
Confidence 4688885 599999999999999999999999 5432221111222211 110 0011223455889999877
|
|
| >cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins | Back alignment and domain information |
|---|
Probab=94.73 E-value=0.31 Score=38.00 Aligned_cols=89 Identities=21% Similarity=0.207 Sum_probs=57.0
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcc-------------------cc------cccCCce--EEEEccCC
Q 029118 101 AVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN-------------------AM------ESFGTYV--ESMAGDAS 152 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~-------------------a~------~~~g~~v--evV~GDl~ 152 (198)
+|+|.|+ |-+|.++++.|...|. ++.++..+.-. +. ..+.+++ +.+..++.
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~ 79 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS 79 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence 4899997 8999999999999998 57776543100 00 0112344 34455544
Q ss_pred CHHHHHHhhcCccEEEEcC-----hhHHHHHHHhCCCCeEEEEcc
Q 029118 153 NKKFLKTALRGVRSIICPS-----EGFISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 153 D~~sL~~AL~GvDaVIh~a-----~G~lldAA~~~GVkRiV~vSS 192 (198)
+. ...+.+.+.|.||.+. .-.+.++|++.++. +|...+
T Consensus 80 ~~-~~~~~~~~~diVi~~~d~~~~~~~l~~~~~~~~i~-~i~~~~ 122 (143)
T cd01483 80 ED-NLDDFLDGVDLVIDAIDNIAVRRALNRACKELGIP-VIDAGG 122 (143)
T ss_pred hh-hHHHHhcCCCEEEECCCCHHHHHHHHHHHHHcCCC-EEEEcC
Confidence 43 3367789999999882 12277889988854 444443
|
This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. |
| >PRK07574 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.72 E-value=0.088 Score=49.04 Aligned_cols=67 Identities=7% Similarity=-0.025 Sum_probs=47.9
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+..+++|.|.|. |.||+.+++.|..-|.+|.+..|...+.......+++ -..+++++++.+|.|+.+
T Consensus 189 ~L~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~~g~~-------~~~~l~ell~~aDvV~l~ 255 (385)
T PRK07574 189 DLEGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQELGLT-------YHVSFDSLVSVCDVVTIH 255 (385)
T ss_pred ecCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCCCchhhHhhcCce-------ecCCHHHHhhcCCEEEEc
Confidence 356788999985 9999999999999999999998765322111111122 123578899999999854
|
|
| >TIGR00936 ahcY adenosylhomocysteinase | Back alignment and domain information |
|---|
Probab=94.69 E-value=0.086 Score=49.55 Aligned_cols=65 Identities=17% Similarity=0.046 Sum_probs=48.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
..+++|+|.| .|.||+.+++.|...|.+|.+..+++.++......+++++ .+.++++++|.||.+
T Consensus 193 l~Gk~VvViG-~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~~G~~v~--------~leeal~~aDVVIta 257 (406)
T TIGR00936 193 IAGKTVVVAG-YGWCGKGIAMRARGMGARVIVTEVDPIRALEAAMDGFRVM--------TMEEAAKIGDIFITA 257 (406)
T ss_pred CCcCEEEEEC-CCHHHHHHHHHHhhCcCEEEEEeCChhhHHHHHhcCCEeC--------CHHHHHhcCCEEEEC
Confidence 4688899998 7889999999999999999999888866433222234332 124577889999876
|
This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704). |
| >PRK12480 D-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.66 E-value=0.082 Score=47.89 Aligned_cols=63 Identities=14% Similarity=0.107 Sum_probs=47.7
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
...+++|.|.| .|.||+.+++.|...|++|.+..|++..... .++ -..++.++++.+|.|+.+
T Consensus 143 ~l~g~~VgIIG-~G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~----~~~-------~~~~l~ell~~aDiVil~ 205 (330)
T PRK12480 143 PVKNMTVAIIG-TGRIGAATAKIYAGFGATITAYDAYPNKDLD----FLT-------YKDSVKEAIKDADIISLH 205 (330)
T ss_pred ccCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEeCChhHhhh----hhh-------ccCCHHHHHhcCCEEEEe
Confidence 35677899997 5999999999999999999999887643211 111 123578899999999865
|
|
| >cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family | Back alignment and domain information |
|---|
Probab=94.66 E-value=0.13 Score=44.54 Aligned_cols=64 Identities=9% Similarity=0.096 Sum_probs=45.5
Q ss_pred EEEEcCCChHHHHHHHHHHHCC----CcEEEEEeCCcccccc-------cCC--ceEEEEccCCCHHHHHHhhcCccEEE
Q 029118 102 VLVTDGDSDIGQMVILSLIVKR----TRIKALVKDKRNAMES-------FGT--YVESMAGDASNKKFLKTALRGVRSII 168 (198)
Q Consensus 102 ILVTGATGfIG~~Vvr~Ll~~G----~~VralvR~~~~a~~~-------~g~--~vevV~GDl~D~~sL~~AL~GvDaVI 168 (198)
|.|.||+|.+|..++..|+..+ .+|..++++++++... ... ..++.. ...+.++++++|.||
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~-----~~d~~~~~~~aDiVv 75 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSI-----TDDPYEAFKDADVVI 75 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEE-----CCchHHHhCCCCEEE
Confidence 5799999999999999999888 6899998877553211 011 122221 123578899999999
Q ss_pred Ec
Q 029118 169 CP 170 (198)
Q Consensus 169 h~ 170 (198)
.+
T Consensus 76 ~t 77 (263)
T cd00650 76 IT 77 (263)
T ss_pred EC
Confidence 86
|
Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains |
| >TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 | Back alignment and domain information |
|---|
Probab=94.65 E-value=0.35 Score=40.84 Aligned_cols=94 Identities=11% Similarity=0.093 Sum_probs=61.6
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeC---Cccccc---------------------ccCC--ceEEE
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKD---KRNAME---------------------SFGT--YVESM 147 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~---~~~a~~---------------------~~g~--~vevV 147 (198)
+.....+|+|.|+ |.+|+.++..|...|. +++.++++ .+.... .+.+ .++.+
T Consensus 17 ~~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~ 95 (200)
T TIGR02354 17 QKLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAY 95 (200)
T ss_pred HHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEe
Confidence 4567788999998 6699999999999998 58888776 222110 0113 24455
Q ss_pred EccCCCHHHHHHhhcCccEEEEcCh--h---HHHHHH-HhCCCCeEEEE
Q 029118 148 AGDASNKKFLKTALRGVRSIICPSE--G---FISNAG-SLKGVQHVILL 190 (198)
Q Consensus 148 ~GDl~D~~sL~~AL~GvDaVIh~a~--G---~lldAA-~~~GVkRiV~v 190 (198)
..+++ .+.+.+.++++|.||-+.+ . .+.+.+ +..+.+-+++.
T Consensus 96 ~~~i~-~~~~~~~~~~~DlVi~a~Dn~~~k~~l~~~~~~~~~~~~ii~~ 143 (200)
T TIGR02354 96 DEKIT-EENIDKFFKDADIVCEAFDNAEAKAMLVNAVLEKYKDKYLIAA 143 (200)
T ss_pred eeeCC-HhHHHHHhcCCCEEEECCCCHHHHHHHHHHHHHHcCCCcEEEE
Confidence 55654 4677888999999998721 1 245554 44444555553
|
Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter. |
| >PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.65 E-value=0.091 Score=47.46 Aligned_cols=37 Identities=8% Similarity=0.109 Sum_probs=33.5
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEE-eC
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALV-KD 132 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~Vralv-R~ 132 (198)
+..+++|+|.|-++.+|+.+++.|+++|++|++.- |+
T Consensus 155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT 192 (296)
T PRK14188 155 DLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRT 192 (296)
T ss_pred CCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCC
Confidence 56788999999999999999999999999999984 44
|
|
| >TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=94.58 E-value=0.29 Score=43.21 Aligned_cols=39 Identities=15% Similarity=0.229 Sum_probs=33.8
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA 136 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a 136 (198)
.++.+|+|.|+ |.+|..++..+...|.+|.++++++++.
T Consensus 165 ~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~ 203 (349)
T TIGR03201 165 KKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKL 203 (349)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHH
Confidence 34679999999 9999999999999999999998877654
|
Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. |
| >PRK06545 prephenate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=94.57 E-value=0.055 Score=49.14 Aligned_cols=66 Identities=15% Similarity=0.074 Sum_probs=45.8
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+|.|.| +|.+|+.+++.|..+|++|.+..++++........+..++. +. ...+.++++.+|.||.+
T Consensus 2 ~I~iIG-~GliG~siA~~L~~~G~~v~i~~~~~~~~~~~~a~~~~~~~-~~--~~~~~~~~~~aDlVila 67 (359)
T PRK06545 2 TVLIVG-LGLIGGSLALAIKAAGPDVFIIGYDPSAAQLARALGFGVID-EL--AADLQRAAAEADLIVLA 67 (359)
T ss_pred eEEEEE-eCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHhcCCCCc-cc--ccCHHHHhcCCCEEEEe
Confidence 577775 69999999999999999999999988654321111111110 11 13456788999999987
|
|
| >PRK05597 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=94.57 E-value=0.32 Score=44.43 Aligned_cols=97 Identities=18% Similarity=0.094 Sum_probs=63.6
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCc---ccc----------------------cccCCce--EE
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR---NAM----------------------ESFGTYV--ES 146 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~---~a~----------------------~~~g~~v--ev 146 (198)
......+|||.|+ |-+|++++..|...|. +++++..+.- ... ....+.+ +.
T Consensus 24 ~~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~ 102 (355)
T PRK05597 24 QSLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTV 102 (355)
T ss_pred HHHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEE
Confidence 3566779999998 7799999999999997 4555554421 000 0122444 44
Q ss_pred EEccCCCHHHHHHhhcCccEEEEcChh-----HHHHHHHhCCCCeEEEEcccc
Q 029118 147 MAGDASNKKFLKTALRGVRSIICPSEG-----FISNAGSLKGVQHVILLSQGA 194 (198)
Q Consensus 147 V~GDl~D~~sL~~AL~GvDaVIh~a~G-----~lldAA~~~GVkRiV~vSS~~ 194 (198)
+...++ ++...+.++++|.||.+... .+-++|.+.++. +|+.++.+
T Consensus 103 ~~~~i~-~~~~~~~~~~~DvVvd~~d~~~~r~~~n~~c~~~~ip-~v~~~~~g 153 (355)
T PRK05597 103 SVRRLT-WSNALDELRDADVILDGSDNFDTRHLASWAAARLGIP-HVWASILG 153 (355)
T ss_pred EEeecC-HHHHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCCC-EEEEEEec
Confidence 445554 45666788999999988321 256788888865 66665544
|
|
| >PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed | Back alignment and domain information |
|---|
Probab=94.57 E-value=0.1 Score=46.00 Aligned_cols=65 Identities=9% Similarity=-0.018 Sum_probs=42.9
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+|.|.| .|.+|+.+++.|+++|++|.+..|++++.......+++. ..+++.+.+....+|.||.+
T Consensus 2 ~Ig~IG-lG~mG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~----~~s~~~~~~~~~~advVi~~ 66 (299)
T PRK12490 2 KLGLIG-LGKMGGNMAERLREDGHEVVGYDVNQEAVDVAGKLGITA----RHSLEELVSKLEAPRTIWVM 66 (299)
T ss_pred EEEEEc-ccHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCee----cCCHHHHHHhCCCCCEEEEE
Confidence 577885 899999999999999999999998876543322222221 22343333333346788765
|
|
| >TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase | Back alignment and domain information |
|---|
Probab=94.55 E-value=0.04 Score=50.71 Aligned_cols=70 Identities=14% Similarity=0.076 Sum_probs=46.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCC-------ceE-----EE-EccCCCHHHHHHhhcCccE
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT-------YVE-----SM-AGDASNKKFLKTALRGVRS 166 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~-------~ve-----vV-~GDl~D~~sL~~AL~GvDa 166 (198)
++|.|.| .|.+|..++..|.++||+|.+..|++++....... +++ .+ .+-+.-..++.++++++|.
T Consensus 1 mkI~vIG-lG~~G~~lA~~La~~G~~V~~~d~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~~~~~~~~~~adv 79 (411)
T TIGR03026 1 MKIAVIG-LGYVGLPLAALLADLGHEVTGVDIDQEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRATTDYEDAIRDADV 79 (411)
T ss_pred CEEEEEC-CCchhHHHHHHHHhcCCeEEEEECCHHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEECCHHHHHhhCCE
Confidence 3688886 69999999999999999999999988664322110 000 00 0111111245667899999
Q ss_pred EEEc
Q 029118 167 IICP 170 (198)
Q Consensus 167 VIh~ 170 (198)
||.+
T Consensus 80 vii~ 83 (411)
T TIGR03026 80 IIIC 83 (411)
T ss_pred EEEE
Confidence 9876
|
All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively. |
| >cd05292 LDH_2 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=94.55 E-value=0.18 Score=44.99 Aligned_cols=63 Identities=16% Similarity=0.200 Sum_probs=44.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC--CcEEEEEeCCccccc----ccC-----CceEEEEccCCCHHHHHHhhcCccEEE
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAME----SFG-----TYVESMAGDASNKKFLKTALRGVRSII 168 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G--~~VralvR~~~~a~~----~~g-----~~vevV~GDl~D~~sL~~AL~GvDaVI 168 (198)
++|.|.|+ |.+|..++..|+.+| ++|.++.++++++.. ... ....+..+ | .++++++|.||
T Consensus 1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~~---d----~~~l~~aDiVi 72 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYAG---D----YADCKGADVVV 72 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEeeC---C----HHHhCCCCEEE
Confidence 47999998 999999999999999 689999988754421 110 11222222 2 24699999999
Q ss_pred Ec
Q 029118 169 CP 170 (198)
Q Consensus 169 h~ 170 (198)
.+
T Consensus 73 it 74 (308)
T cd05292 73 IT 74 (308)
T ss_pred Ec
Confidence 87
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=94.53 E-value=0.15 Score=47.99 Aligned_cols=82 Identities=12% Similarity=0.072 Sum_probs=53.1
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-cCCceEEEEccCCCHHHHHHhhcCccEEEEc-C--h
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-FGTYVESMAGDASNKKFLKTALRGVRSIICP-S--E 172 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~-a--~ 172 (198)
..+++|+|.| .|..|..+++.|..+|++|.+..|++....+. ...++++..+.-. ++ -+.++|.||.. . .
T Consensus 13 ~~~~~v~v~G-~G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~~~~~-~~----~~~~~d~vV~Spgi~~ 86 (473)
T PRK00141 13 ELSGRVLVAG-AGVSGRGIAAMLSELGCDVVVADDNETARHKLIEVTGVADISTAEA-SD----QLDSFSLVVTSPGWRP 86 (473)
T ss_pred ccCCeEEEEc-cCHHHHHHHHHHHHCCCEEEEECCChHHHHHHHHhcCcEEEeCCCc-hh----HhcCCCEEEeCCCCCC
Confidence 3456799999 77899999999999999999998765443221 1225677665322 12 24678888865 2 1
Q ss_pred h-HHHHHHHhCCC
Q 029118 173 G-FISNAGSLKGV 184 (198)
Q Consensus 173 G-~lldAA~~~GV 184 (198)
. -.+.+|++.|+
T Consensus 87 ~~p~~~~a~~~gi 99 (473)
T PRK00141 87 DSPLLVDAQSQGL 99 (473)
T ss_pred CCHHHHHHHHCCC
Confidence 1 14555555554
|
|
| >PRK08644 thiamine biosynthesis protein ThiF; Provisional | Back alignment and domain information |
|---|
Probab=94.51 E-value=0.38 Score=40.91 Aligned_cols=95 Identities=9% Similarity=0.148 Sum_probs=62.2
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCCc-EEEEEeCC---cccc---------------------cccCCc--eEEE
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDK---RNAM---------------------ESFGTY--VESM 147 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~-VralvR~~---~~a~---------------------~~~g~~--vevV 147 (198)
+.....+|+|.|+ |-+|++++..|...|.. +++++.+. +... ..+.+. ++.+
T Consensus 24 ~~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~ 102 (212)
T PRK08644 24 EKLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAH 102 (212)
T ss_pred HHHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEE
Confidence 4667778999996 77999999999999975 77776652 1100 011233 4445
Q ss_pred EccCCCHHHHHHhhcCccEEEEcC--hh---HHHHHHHhC-CCCeEEEEcc
Q 029118 148 AGDASNKKFLKTALRGVRSIICPS--EG---FISNAGSLK-GVQHVILLSQ 192 (198)
Q Consensus 148 ~GDl~D~~sL~~AL~GvDaVIh~a--~G---~lldAA~~~-GVkRiV~vSS 192 (198)
...+++ +.+.+.++++|.||.+. .. .+.+.|.+. + ..+|+.+.
T Consensus 103 ~~~i~~-~~~~~~~~~~DvVI~a~D~~~~r~~l~~~~~~~~~-~p~I~~~~ 151 (212)
T PRK08644 103 NEKIDE-DNIEELFKDCDIVVEAFDNAETKAMLVETVLEHPG-KKLVAASG 151 (212)
T ss_pred eeecCH-HHHHHHHcCCCEEEECCCCHHHHHHHHHHHHHhCC-CCEEEeeh
Confidence 555544 56677889999999772 11 266777777 6 44555443
|
|
| >KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=94.49 E-value=0.17 Score=46.36 Aligned_cols=70 Identities=16% Similarity=0.245 Sum_probs=49.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCC-CcEEEEEeCCccc--ccccCCceEEEEccCCCHHHHHHhhc----CccEEEE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNA--MESFGTYVESMAGDASNKKFLKTALR----GVRSIIC 169 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G-~~VralvR~~~~a--~~~~g~~vevV~GDl~D~~sL~~AL~----GvDaVIh 169 (198)
.+++.|||.||+|-+|+.+++.+...| ..|.+.. +.++. .+.++. -...|+.|++.++...+ ++|.|+.
T Consensus 156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~-s~e~~~l~k~lGA---d~vvdy~~~~~~e~~kk~~~~~~DvVlD 231 (347)
T KOG1198|consen 156 SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTAC-SKEKLELVKKLGA---DEVVDYKDENVVELIKKYTGKGVDVVLD 231 (347)
T ss_pred CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEc-ccchHHHHHHcCC---cEeecCCCHHHHHHHHhhcCCCccEEEE
Confidence 446789999999999999998888888 4444444 44432 233341 23457888777776665 7999998
Q ss_pred c
Q 029118 170 P 170 (198)
Q Consensus 170 ~ 170 (198)
|
T Consensus 232 ~ 232 (347)
T KOG1198|consen 232 C 232 (347)
T ss_pred C
Confidence 8
|
|
| >PLN03139 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.48 E-value=0.098 Score=48.78 Aligned_cols=67 Identities=12% Similarity=0.029 Sum_probs=48.1
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+..+++|.|.| .|.||+.+++.|..-|.+|.+..|...+.......+++. .++++++++.+|.|+++
T Consensus 196 ~L~gktVGIVG-~G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~~~g~~~-------~~~l~ell~~sDvV~l~ 262 (386)
T PLN03139 196 DLEGKTVGTVG-AGRIGRLLLQRLKPFNCNLLYHDRLKMDPELEKETGAKF-------EEDLDAMLPKCDVVVIN 262 (386)
T ss_pred CCCCCEEEEEe-ecHHHHHHHHHHHHCCCEEEEECCCCcchhhHhhcCcee-------cCCHHHHHhhCCEEEEe
Confidence 46788999999 799999999999999999998877643221111111221 23678889999999854
|
|
| >PTZ00354 alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.47 E-value=0.15 Score=43.46 Aligned_cols=73 Identities=11% Similarity=0.006 Sum_probs=47.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceE-EEEccCCC--HHHHHHhh--cCccEEEEc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVE-SMAGDASN--KKFLKTAL--RGVRSIICP 170 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~ve-vV~GDl~D--~~sL~~AL--~GvDaVIh~ 170 (198)
+..+|||+||+|.+|+.++..+.+.|.+|.++++++++.......+++ ++...-.+ ...+.+.. +++|.+|.+
T Consensus 140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~ 217 (334)
T PTZ00354 140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFCKKLAAIILIRYPDEEGFAPKVKKLTGEKGVNLVLDC 217 (334)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCChhHHHHHHHHHhCCCCceEEEEC
Confidence 457899999999999999999999999988888776543222111122 22211111 22344444 468999987
|
|
| >PRK13304 L-aspartate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=94.47 E-value=0.19 Score=43.93 Aligned_cols=84 Identities=11% Similarity=0.141 Sum_probs=46.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHHC--CCcEEEE-EeCCcccccccC-CceEEEEccCCCHHHHHHhhcCccEEEEcC-hhH
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVK--RTRIKAL-VKDKRNAMESFG-TYVESMAGDASNKKFLKTALRGVRSIICPS-EGF 174 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~--G~~Vral-vR~~~~a~~~~g-~~vevV~GDl~D~~sL~~AL~GvDaVIh~a-~G~ 174 (198)
++|.|.|. |.+|+.+++.|... ++++.++ .|+++++..... .++.. +.| +++.+.++|.|+.+. ...
T Consensus 2 mrIgIIG~-G~iG~~ia~~l~~~~~~~elv~v~d~~~~~a~~~a~~~~~~~----~~~---~~ell~~~DvVvi~a~~~~ 73 (265)
T PRK13304 2 LKIGIVGC-GAIASLITKAILSGRINAELYAFYDRNLEKAENLASKTGAKA----CLS---IDELVEDVDLVVECASVNA 73 (265)
T ss_pred CEEEEECc-cHHHHHHHHHHHcCCCCeEEEEEECCCHHHHHHHHHhcCCee----ECC---HHHHhcCCCEEEEcCChHH
Confidence 57999994 99999999998875 3565554 345444322111 01111 123 344457899998772 111
Q ss_pred ---HHHHHHhCCCCeEEEEcc
Q 029118 175 ---ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 175 ---lldAA~~~GVkRiV~vSS 192 (198)
++..+.++| +++|.+|.
T Consensus 74 ~~~~~~~al~~G-k~Vvv~s~ 93 (265)
T PRK13304 74 VEEVVPKSLENG-KDVIIMSV 93 (265)
T ss_pred HHHHHHHHHHcC-CCEEEEch
Confidence 333344455 45555443
|
|
| >PRK02705 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=94.46 E-value=0.28 Score=45.20 Aligned_cols=84 Identities=8% Similarity=-0.042 Sum_probs=58.1
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc-----cccCCceEEEEccCCCHHHHHHhhcCccEEEEc-C--h
Q 029118 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-----ESFGTYVESMAGDASNKKFLKTALRGVRSIICP-S--E 172 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~-----~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~-a--~ 172 (198)
+|+|.| .|-.|..+++.|.++|++|.+..+++.... .....++++..+.-.+.+.+...+.+.|.||.. . .
T Consensus 2 ~v~viG-~G~sG~s~a~~l~~~G~~V~~~D~~~~~~~~~~~~~l~~~gi~~~~g~~~~~~~~~~~~~~~d~vv~s~gi~~ 80 (459)
T PRK02705 2 IAHVIG-LGRSGIAAARLLKAQGWEVVVSDRNDSPELLERQQELEQEGITVKLGKPLELESFQPWLDQPDLVVVSPGIPW 80 (459)
T ss_pred eEEEEc-cCHHHHHHHHHHHHCCCEEEEECCCCchhhHHHHHHHHHcCCEEEECCccchhhhhHHhhcCCEEEECCCCCC
Confidence 588888 566999999999999999999987654311 122335777777655666666778889999875 2 1
Q ss_pred -hHHHHHHHhCCCC
Q 029118 173 -GFISNAGSLKGVQ 185 (198)
Q Consensus 173 -G~lldAA~~~GVk 185 (198)
-..+.+|++.|++
T Consensus 81 ~~~~~~~a~~~~i~ 94 (459)
T PRK02705 81 DHPTLVELRERGIE 94 (459)
T ss_pred CCHHHHHHHHcCCc
Confidence 1255555665554
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 198 | |||
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 99.83 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.83 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 99.83 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.83 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.82 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 99.82 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.81 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.81 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 99.81 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.81 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.8 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 99.8 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.79 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 99.79 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.79 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.79 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.79 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 99.78 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.78 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.78 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 99.78 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.77 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 99.77 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 99.77 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.77 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 99.77 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.77 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.77 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.77 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 99.77 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.76 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 99.76 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 99.76 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 99.76 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 99.76 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.76 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.76 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 99.75 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.75 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 99.75 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.75 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 99.75 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.75 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.75 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.75 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.75 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.74 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 99.74 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.74 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.74 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.73 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 99.73 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 99.73 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 99.73 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.73 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.72 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 99.72 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.72 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.72 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.72 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.72 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.72 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.71 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.71 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.7 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.7 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.7 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.7 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.69 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.69 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.69 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 99.68 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 99.68 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 99.68 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.67 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.66 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 99.66 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.66 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 99.66 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 99.65 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 99.65 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 99.64 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.64 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.64 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.63 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.62 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.62 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.59 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.57 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.56 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.56 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.56 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.56 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.54 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.54 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 99.54 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.53 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.52 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.52 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.52 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 99.52 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 99.51 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 99.51 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 99.51 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.51 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 99.51 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 99.51 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.51 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 99.5 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.5 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 99.5 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.49 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 99.49 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.49 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.49 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 99.49 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.49 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.49 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.49 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 99.49 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 99.48 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.48 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.48 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 99.48 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.48 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 99.48 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 99.48 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 99.48 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 99.48 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 99.47 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.47 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 99.47 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 99.47 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 99.47 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 99.46 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 99.46 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 99.46 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 99.46 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.46 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.46 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 99.45 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 99.45 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 99.45 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 99.45 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.45 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 99.45 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 99.45 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 99.44 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 99.44 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 99.44 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 99.44 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 99.44 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 99.44 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 99.43 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.43 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 99.43 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.43 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 99.43 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.43 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 99.42 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 99.42 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 99.42 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.42 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.42 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 99.42 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 99.41 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 99.41 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.41 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 99.4 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 99.4 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 99.4 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.4 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.4 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 99.39 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.39 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 99.39 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 99.39 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 99.39 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.39 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 99.38 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 99.38 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 99.38 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.38 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.38 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 99.38 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 99.38 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 99.38 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 99.38 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 99.38 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 99.37 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 99.37 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.37 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 99.37 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 99.37 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 99.37 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 99.36 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.36 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 99.36 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 99.36 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 99.36 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.36 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 99.36 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 99.36 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 99.36 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 99.36 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 99.36 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 99.35 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 99.35 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 99.35 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 99.35 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 99.35 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 99.35 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 99.34 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 99.34 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 99.34 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 99.34 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 99.34 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.34 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 99.34 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 99.33 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 99.33 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.33 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 99.33 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 99.33 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 99.33 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 99.33 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 99.33 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 99.33 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 99.32 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 99.32 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 99.32 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 99.32 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 99.31 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 99.31 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.31 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 99.3 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 99.3 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 99.3 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 99.3 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 99.3 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 99.3 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 99.3 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.29 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 99.28 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.28 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 99.28 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 99.28 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 99.27 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.27 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 99.27 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 99.26 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 99.26 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 99.26 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.26 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 99.25 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 99.25 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 99.24 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 99.24 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 99.24 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 99.24 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 99.23 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 99.23 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 99.23 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 99.22 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 99.22 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 99.22 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 99.22 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 99.22 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 99.21 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 99.2 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 99.2 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 99.19 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 99.19 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 99.18 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 99.16 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 99.16 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 99.16 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.15 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 99.14 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.14 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 99.14 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 99.14 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.13 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 99.13 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 99.1 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 99.1 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 99.1 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 99.09 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 99.08 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 99.06 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 99.05 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 99.03 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.02 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 99.01 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 99.01 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 98.96 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 98.96 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 98.95 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 98.92 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 98.91 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 98.87 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 98.86 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 98.85 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 98.82 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 98.81 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 98.81 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 98.78 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 98.76 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 98.76 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 98.75 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 98.7 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 98.68 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 98.64 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 98.63 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 98.63 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 98.62 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 98.61 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 98.55 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 98.46 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 98.46 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 98.45 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 98.45 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 98.44 | |
| 1lnq_A | 336 | MTHK channels, potassium channel related protein; | 98.42 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 98.4 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 98.34 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 98.3 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 98.3 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 98.25 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 98.16 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 98.1 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 98.09 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 98.07 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 98.06 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 98.06 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 98.05 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 98.04 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 98.02 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 98.0 | |
| 2hjs_A | 340 | USG-1 protein homolog; aspartate-semialdehyde dehy | 97.99 | |
| 2nqt_A | 352 | N-acetyl-gamma-glutamyl-phosphate reductase; apopr | 97.94 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 97.91 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 97.88 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 97.87 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 97.86 | |
| 2r00_A | 336 | Aspartate-semialdehyde dehydrogenase; conformation | 97.82 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 97.82 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 97.8 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 97.8 | |
| 2ozp_A | 345 | N-acetyl-gamma-glutamyl-phosphate reductase; amino | 97.75 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 97.74 | |
| 1mld_A | 314 | Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D | 97.74 | |
| 4gx0_A | 565 | TRKA domain protein; membrane protein, ION channel | 97.73 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 97.72 | |
| 2vns_A | 215 | Metalloreductase steap3; metal-binding, transmembr | 97.72 | |
| 5mdh_A | 333 | Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH | 97.72 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 97.71 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 97.71 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 97.7 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 97.69 | |
| 1dih_A | 273 | Dihydrodipicolinate reductase; oxidoreductase; HET | 97.65 | |
| 1xyg_A | 359 | Putative N-acetyl-gamma-glutamyl-phosphate reduct; | 97.63 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 97.61 | |
| 1ys4_A | 354 | Aspartate-semialdehyde dehydrogenase; oxidoreducta | 97.61 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 97.6 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 97.57 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 97.53 | |
| 1p9l_A | 245 | Dihydrodipicolinate reductase; oxidoreductase, lys | 97.53 | |
| 1t4b_A | 367 | Aspartate-semialdehyde dehydrogenase; asadh, HOSR, | 97.48 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 97.46 | |
| 4gx0_A | 565 | TRKA domain protein; membrane protein, ION channel | 97.45 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 97.43 | |
| 2yv3_A | 331 | Aspartate-semialdehyde dehydrogenase; aspartate pa | 97.43 | |
| 3dr3_A | 337 | N-acetyl-gamma-glutamyl-phosphate reductase; csgid | 97.42 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 97.42 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 97.4 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 97.4 | |
| 3pwk_A | 366 | Aspartate-semialdehyde dehydrogenase; NADP binding | 97.39 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 97.37 | |
| 3ax6_A | 380 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 97.35 | |
| 1y81_A | 138 | Conserved hypothetical protein; hyperthermophIle, | 97.33 | |
| 2nu8_A | 288 | Succinyl-COA ligase [ADP-forming] subunit alpha; c | 97.32 | |
| 2ew2_A | 316 | 2-dehydropantoate 2-reductase, putative; alpha-str | 97.32 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 97.29 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 97.28 | |
| 3c24_A | 286 | Putative oxidoreductase; YP_511008.1, structural g | 97.27 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 97.24 | |
| 1oi7_A | 288 | Succinyl-COA synthetase alpha chain; SCS, ligase, | 97.23 | |
| 1iuk_A | 140 | Hypothetical protein TT1466; structural genomics, | 97.23 | |
| 2ep5_A | 350 | 350AA long hypothetical aspartate-semialdehyde deh | 97.23 | |
| 2yv1_A | 294 | Succinyl-COA ligase [ADP-forming] subunit alpha; C | 97.23 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 97.22 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 97.21 | |
| 4e4t_A | 419 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 97.21 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 97.21 | |
| 2dq4_A | 343 | L-threonine 3-dehydrogenase; NAD-dependent, oxidor | 97.18 | |
| 2d59_A | 144 | Hypothetical protein PH1109; COA binding, structur | 97.17 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 97.15 | |
| 1kjq_A | 391 | GART 2, phosphoribosylglycinamide formyltransferas | 97.14 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 97.14 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 97.13 | |
| 3k5i_A | 403 | Phosphoribosyl-aminoimidazole carboxylase; purine | 97.12 | |
| 2pv7_A | 298 | T-protein [includes: chorismate mutase (EC 5.4.99 | 97.11 | |
| 3orq_A | 377 | N5-carboxyaminoimidazole ribonucleotide synthetas; | 97.1 | |
| 2duw_A | 145 | Putative COA-binding protein; ligand binding prote | 97.08 | |
| 2yv2_A | 297 | Succinyl-COA synthetase alpha chain; COA-binding d | 97.05 | |
| 2b5w_A | 357 | Glucose dehydrogenase; nucleotide binding motif, o | 97.04 | |
| 1e3j_A | 352 | NADP(H)-dependent ketose reductase; oxidoreductase | 97.04 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 97.02 | |
| 3tz6_A | 344 | Aspartate-semialdehyde dehydrogenase; asadh, ASD, | 97.02 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 97.0 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 96.99 | |
| 3pef_A | 287 | 6-phosphogluconate dehydrogenase, NAD-binding; gam | 96.97 | |
| 2dwc_A | 433 | PH0318, 433AA long hypothetical phosphoribosylglyc | 96.95 | |
| 1l7d_A | 384 | Nicotinamide nucleotide transhydrogenase, subunit | 96.93 | |
| 1uuf_A | 369 | YAHK, zinc-type alcohol dehydrogenase-like protein | 96.93 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 96.93 | |
| 2cf5_A | 357 | Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign | 96.93 | |
| 2vn8_A | 375 | Reticulon-4-interacting protein 1; mitochondrion, | 96.92 | |
| 3doj_A | 310 | AT3G25530, dehydrogenase-like protein; gamma-hydro | 96.92 | |
| 4a0s_A | 447 | Octenoyl-COA reductase/carboxylase; oxidoreductase | 96.92 | |
| 1txg_A | 335 | Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid | 96.91 | |
| 1piw_A | 360 | Hypothetical zinc-type alcohol dehydrogenase- like | 96.9 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 96.88 | |
| 4dll_A | 320 | 2-hydroxy-3-oxopropionate reductase; structural ge | 96.88 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 96.87 | |
| 2h78_A | 302 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601 | 96.87 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 96.86 | |
| 3q2o_A | 389 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 96.85 | |
| 3two_A | 348 | Mannitol dehydrogenase; cinnamyl-alcohol dehydroge | 96.84 | |
| 3gaz_A | 343 | Alcohol dehydrogenase superfamily protein; oxidore | 96.84 | |
| 3pdu_A | 287 | 3-hydroxyisobutyrate dehydrogenase family protein; | 96.82 | |
| 3tqh_A | 321 | Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella | 96.82 | |
| 3uog_A | 363 | Alcohol dehydrogenase; structural genomics, protei | 96.8 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 96.8 | |
| 3p2y_A | 381 | Alanine dehydrogenase/pyridine nucleotide transhy; | 96.79 | |
| 2fp4_A | 305 | Succinyl-COA ligase [GDP-forming] alpha-chain, mit | 96.78 | |
| 3pwz_A | 272 | Shikimate dehydrogenase 3; alpha-beta, oxidoreduct | 96.78 | |
| 3pzr_A | 370 | Aspartate-semialdehyde dehydrogenase; NADP, oxidor | 96.77 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 96.77 | |
| 3vku_A | 326 | L-LDH, L-lactate dehydrogenase; rossmann fold, NAD | 96.77 | |
| 1bg6_A | 359 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L | 96.76 | |
| 4dio_A | 405 | NAD(P) transhydrogenase subunit alpha PART 1; stru | 96.76 | |
| 4f3y_A | 272 | DHPR, dihydrodipicolinate reductase; structural ge | 96.76 | |
| 1xa0_A | 328 | Putative NADPH dependent oxidoreductases; structur | 96.73 | |
| 3uw3_A | 377 | Aspartate-semialdehyde dehydrogenase; structural g | 96.73 | |
| 3m6i_A | 363 | L-arabinitol 4-dehydrogenase; medium chain dehydro | 96.73 | |
| 3krt_A | 456 | Crotonyl COA reductase; structural genomics, prote | 96.73 | |
| 2gf2_A | 296 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct | 96.72 | |
| 1cdo_A | 374 | Alcohol dehydrogenase; oxidoreductase, oxidoreduct | 96.71 | |
| 1vpd_A | 299 | Tartronate semialdehyde reductase; structural geno | 96.7 | |
| 3cky_A | 301 | 2-hydroxymethyl glutarate dehydrogenase; rossmann | 96.7 | |
| 3fbg_A | 346 | Putative arginate lyase; structural genomics, unkn | 96.7 | |
| 1x13_A | 401 | NAD(P) transhydrogenase subunit alpha; NAD(H)-bind | 96.68 | |
| 3qha_A | 296 | Putative oxidoreductase; seattle structural genomi | 96.66 | |
| 3dtt_A | 245 | NADP oxidoreductase; structural genomics, joint ce | 96.65 | |
| 1e3i_A | 376 | Alcohol dehydrogenase, class II; HET: NAD; 2.08A { | 96.63 | |
| 1vj0_A | 380 | Alcohol dehydrogenase, zinc-containing; TM0436, st | 96.62 | |
| 3uko_A | 378 | Alcohol dehydrogenase class-3; alcohol dehydrogena | 96.62 | |
| 1pl8_A | 356 | Human sorbitol dehydrogenase; NAD, oxidoreductase; | 96.61 | |
| 2jhf_A | 374 | Alcohol dehydrogenase E chain; oxidoreductase, met | 96.61 | |
| 4huj_A | 220 | Uncharacterized protein; PSI-biology, nysgrc, stru | 96.61 | |
| 2raf_A | 209 | Putative dinucleotide-binding oxidoreductase; NP_7 | 96.6 | |
| 1ks9_A | 291 | KPA reductase;, 2-dehydropantoate 2-reductase; PAN | 96.6 | |
| 4ffl_A | 363 | PYLC; amino acid, biosynthesis of pyrrolysine, iso | 96.57 | |
| 3fi9_A | 343 | Malate dehydrogenase; structural genomics, oxidore | 96.56 | |
| 3g0o_A | 303 | 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine | 96.56 | |
| 3d1l_A | 266 | Putative NADP oxidoreductase BF3122; structural ge | 96.55 | |
| 1ur5_A | 309 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 96.55 | |
| 2uyy_A | 316 | N-PAC protein; long-chain dehydrogenase, cytokine; | 96.55 | |
| 1gpj_A | 404 | Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro | 96.55 | |
| 1mv8_A | 436 | GMD, GDP-mannose 6-dehydrogenase; rossman fold, do | 96.52 | |
| 2fzw_A | 373 | Alcohol dehydrogenase class III CHI chain; S-nitro | 96.52 | |
| 2dc1_A | 236 | L-aspartate dehydrogenase; NAD, oxidoreductase; HE | 96.52 | |
| 1gu7_A | 364 | Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s | 96.5 | |
| 3l6d_A | 306 | Putative oxidoreductase; structural genomics, prot | 96.47 | |
| 1p0f_A | 373 | NADP-dependent alcohol dehydrogenase; ADH topology | 96.46 | |
| 3pqe_A | 326 | L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas | 96.43 | |
| 2dph_A | 398 | Formaldehyde dismutase; dismutation of aldehydes, | 96.42 | |
| 4dpl_A | 359 | Malonyl-COA/succinyl-COA reductase; dinucleotide b | 96.41 | |
| 4dpk_A | 359 | Malonyl-COA/succinyl-COA reductase; dinucleotide b | 96.41 | |
| 2gcg_A | 330 | Glyoxylate reductase/hydroxypyruvate reductase; NA | 96.41 | |
| 2ph5_A | 480 | Homospermidine synthase; alpha-beta protein, struc | 96.4 | |
| 3aw8_A | 369 | PURK, phosphoribosylaminoimidazole carboxylase, AT | 96.39 | |
| 3u62_A | 253 | Shikimate dehydrogenase; shikimate pathway, oxidor | 96.39 | |
| 3ip1_A | 404 | Alcohol dehydrogenase, zinc-containing; structural | 96.38 | |
| 1h2b_A | 359 | Alcohol dehydrogenase; oxidoreductase, archaea, hy | 96.37 | |
| 2ahr_A | 259 | Putative pyrroline carboxylate reductase; pyrrolin | 96.35 | |
| 3s2e_A | 340 | Zinc-containing alcohol dehydrogenase superfamily; | 96.34 | |
| 1yb4_A | 295 | Tartronic semialdehyde reductase; structural genom | 96.34 | |
| 3ff4_A | 122 | Uncharacterized protein; structural genomics, PSI- | 96.31 | |
| 1zud_1 | 251 | Adenylyltransferase THIF; thiamin, thiazole, prote | 96.28 | |
| 3hsk_A | 381 | Aspartate-semialdehyde dehydrogenase; candida albi | 96.27 | |
| 3tri_A | 280 | Pyrroline-5-carboxylate reductase; amino acid bios | 96.26 | |
| 2cvz_A | 289 | Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; | 96.26 | |
| 1pzg_A | 331 | LDH, lactate dehydrogenase; apicomplexa, APAD, tet | 96.26 | |
| 1np3_A | 338 | Ketol-acid reductoisomerase; A DEEP figure-OF-eigh | 96.23 | |
| 3dfz_A | 223 | SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase | 96.22 | |
| 2hk9_A | 275 | Shikimate dehydrogenase; shikimate pathway, drug d | 96.21 | |
| 4e21_A | 358 | 6-phosphogluconate dehydrogenase (decarboxylating; | 96.18 |
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=2e-20 Score=159.73 Aligned_cols=101 Identities=22% Similarity=0.336 Sum_probs=83.1
Q ss_pred CCccccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 91 EDEFPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 91 ~~~~~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+....+..+++|||||||||||++++++|+++|++|++++|++.. .+++++.+|++|++.+.++++++|+|||+
T Consensus 11 ~~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~------~~~~~~~~Dl~d~~~~~~~~~~~d~vih~ 84 (347)
T 4id9_A 11 SSGLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG------TGGEEVVGSLEDGQALSDAIMGVSAVLHL 84 (347)
T ss_dssp ----------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS------SCCSEEESCTTCHHHHHHHHTTCSEEEEC
T ss_pred CCcccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC------CCccEEecCcCCHHHHHHHHhCCCEEEEC
Confidence 344567778899999999999999999999999999999998754 45889999999999999999999999998
Q ss_pred C------------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 171 S------------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 171 a------------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
+ .++ ++++|++++++||||+||.+||+
T Consensus 85 A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg 131 (347)
T 4id9_A 85 GAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYP 131 (347)
T ss_dssp CCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTT
T ss_pred CcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhC
Confidence 2 122 88999999999999999999985
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.83 E-value=3.3e-20 Score=149.66 Aligned_cols=97 Identities=10% Similarity=0.198 Sum_probs=86.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC-------
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS------- 171 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a------- 171 (198)
+++|||||||||||++++++|+++|++|++++|++++.... ..+++++.+|++|++++.++++++|+|||++
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~ 82 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE-NEHLKVKKADVSSLDEVCEVCKGADAVISAFNPGWNNP 82 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC-CTTEEEECCCTTCHHHHHHHHTTCSEEEECCCC-----
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc-cCceEEEEecCCCHHHHHHHhcCCCEEEEeCcCCCCCh
Confidence 57899999999999999999999999999999998765432 3679999999999999999999999999982
Q ss_pred -------hhH--HHHHHHhCCCCeEEEEccccee
Q 029118 172 -------EGF--ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 172 -------~G~--lldAA~~~GVkRiV~vSS~~Vy 196 (198)
.++ ++++|++++++||||+||.++|
T Consensus 83 ~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~ 116 (227)
T 3dhn_A 83 DIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSL 116 (227)
T ss_dssp -CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTS
T ss_pred hHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhc
Confidence 122 8999999999999999998765
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.83 E-value=4.4e-20 Score=156.63 Aligned_cols=100 Identities=12% Similarity=0.074 Sum_probs=86.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC------
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS------ 171 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a------ 171 (198)
.+|+|||||||||||++++++|+++|++|++++|++.+.......+++++.+|++|++++.++++++|+|||++
T Consensus 12 ~~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~ 91 (342)
T 2x4g_A 12 AHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERALRGLDGVIFSAGYYPSR 91 (342)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC-------
T ss_pred cCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHHHcCCCEEEECCccCcCC
Confidence 34689999999999999999999999999999998876543333468999999999999999999999999982
Q ss_pred ------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 172 ------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 ------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.++ ++++|+++|++||||+||.++|.
T Consensus 92 ~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~ 131 (342)
T 2x4g_A 92 PRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMP 131 (342)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhC
Confidence 012 78999999999999999999985
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.83 E-value=4.8e-20 Score=154.03 Aligned_cols=96 Identities=16% Similarity=0.218 Sum_probs=86.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHHC-CCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC-------
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS------- 171 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~-G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a------- 171 (198)
|+|||||||||||++++++|+++ |++|++++|++++.......+++++.+|++|++++.++++|+|+|||++
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~~ 80 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSIIHPSF 80 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCCCCSHH
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCCCccch
Confidence 57999999999999999999998 9999999999887665556789999999999999999999999999982
Q ss_pred ---hh--HHHHHHHhCCCCeEEEEcccce
Q 029118 172 ---EG--FISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 172 ---~G--~lldAA~~~GVkRiV~vSS~~V 195 (198)
.+ .++++|+++|++||||+||.+.
T Consensus 81 ~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~ 109 (289)
T 3e48_A 81 KRIPEVENLVYAAKQSGVAHIIFIGYYAD 109 (289)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEEESCC
T ss_pred hhHHHHHHHHHHHHHcCCCEEEEEcccCC
Confidence 12 2899999999999999999764
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.82 E-value=5.2e-20 Score=148.75 Aligned_cols=96 Identities=20% Similarity=0.203 Sum_probs=85.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCC-HHHHHHhhcCccEEEEcC-------
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN-KKFLKTALRGVRSIICPS------- 171 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D-~~sL~~AL~GvDaVIh~a------- 171 (198)
|+||||||||+||++++++|+++|++|++++|++++.... .+++++.+|++| ++++.++++++|+|||++
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~~~~~ 78 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY--NNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSGGKSL 78 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC--TTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCTTSSC
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc--CCceEEEecccCCHHHHHHHHcCCCEEEECCcCCCCCc
Confidence 5799999999999999999999999999999998765433 579999999999 999999999999999982
Q ss_pred -----hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 172 -----EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 -----~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.++ ++++|++++++||||+||.+++.
T Consensus 79 ~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~ 111 (219)
T 3dqp_A 79 LKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQ 111 (219)
T ss_dssp CCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTC
T ss_pred EeEeHHHHHHHHHHHHHhCCCEEEEECcccccC
Confidence 122 89999999999999999987764
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=4.9e-20 Score=157.61 Aligned_cols=101 Identities=16% Similarity=0.170 Sum_probs=86.6
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccccc-------C----CceEEEEccCCCHHHHHHhhcCcc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-------G----TYVESMAGDASNKKFLKTALRGVR 165 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~-------g----~~vevV~GDl~D~~sL~~AL~GvD 165 (198)
..+++|||||||||||++++++|+++|++|++++|++....... . .+++++.+|++|++++.++++++|
T Consensus 23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d 102 (351)
T 3ruf_A 23 FSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVD 102 (351)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTCS
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCCC
Confidence 35689999999999999999999999999999999765422111 0 579999999999999999999999
Q ss_pred EEEEcC--------------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 166 SIICPS--------------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 166 aVIh~a--------------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
+|||++ .++ ++++|++++++||||+||.+||+
T Consensus 103 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg 156 (351)
T 3ruf_A 103 HVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYG 156 (351)
T ss_dssp EEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGT
T ss_pred EEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcC
Confidence 999983 011 78999999999999999999985
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.81 E-value=8.9e-20 Score=149.90 Aligned_cols=100 Identities=19% Similarity=0.216 Sum_probs=88.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCC-CcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC--h--
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS--E-- 172 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G-~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a--~-- 172 (198)
.+++||||||||+||++++++|+++| ++|++++|++++.......+++++++|++|++++.++++++|+|||++ .
T Consensus 22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~~~~ 101 (236)
T 3qvo_A 22 HMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTGEDL 101 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEECCSTTH
T ss_pred cccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCCCch
Confidence 35679999999999999999999999 999999999887666566789999999999999999999999999983 1
Q ss_pred --h--HHHHHHHhCCCCeEEEEcccceec
Q 029118 173 --G--FISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 173 --G--~lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
. .++++|+++|++|||++||.++|.
T Consensus 102 ~~~~~~~~~~~~~~~~~~iV~iSS~~~~~ 130 (236)
T 3qvo_A 102 DIQANSVIAAMKACDVKRLIFVLSLGIYD 130 (236)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCCCC--
T ss_pred hHHHHHHHHHHHHcCCCEEEEEecceecC
Confidence 1 288999999999999999998875
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.9e-19 Score=141.87 Aligned_cols=98 Identities=14% Similarity=0.191 Sum_probs=86.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC---h----
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS---E---- 172 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a---~---- 172 (198)
++||||||||+||++++++|+++|++|++++|++.+.......+++++.+|++|++++.++++++|+|||++ .
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~~~ 83 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRNDLSP 83 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTCCSC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHHHcCCCEEEECccCCCCCCc
Confidence 689999999999999999999999999999998876544335679999999999999999999999999982 1
Q ss_pred ------hH--HHHHHHhCCCCeEEEEcccceec
Q 029118 173 ------GF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 173 ------G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
++ ++++|++++++||||+||.++|.
T Consensus 84 ~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~ 116 (206)
T 1hdo_A 84 TTVMSEGARNIVAAMKAHGVDKVVACTSAFLLW 116 (206)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS
T ss_pred cchHHHHHHHHHHHHHHhCCCeEEEEeeeeecc
Confidence 22 78999999999999999998874
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.81 E-value=7.2e-20 Score=158.05 Aligned_cols=106 Identities=14% Similarity=0.147 Sum_probs=87.2
Q ss_pred CCccccCCCCeEEEEcCCChHHHHHHHHHHHC-CCcEEEEEeCCccccccc-CCceEEEEccCC-CHHHHHHhhcCccEE
Q 029118 91 EDEFPEEARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESF-GTYVESMAGDAS-NKKFLKTALRGVRSI 167 (198)
Q Consensus 91 ~~~~~~~~~~~ILVTGATGfIG~~Vvr~Ll~~-G~~VralvR~~~~a~~~~-g~~vevV~GDl~-D~~sL~~AL~GvDaV 167 (198)
+.++....+++|||||||||||++|+++|+++ |++|++++|++.+..... ..+++++.+|++ |++.+.++++++|+|
T Consensus 16 ~~~~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~V 95 (372)
T 3slg_A 16 TQGPGSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKCDVI 95 (372)
T ss_dssp -------CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEE
T ss_pred hcCCcccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccCCEE
Confidence 44455566789999999999999999999998 999999999887654433 367999999999 999999999999999
Q ss_pred EEcC--------------------hh--HHHHHHHhCCCCeEEEEcccceec
Q 029118 168 ICPS--------------------EG--FISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 168 Ih~a--------------------~G--~lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
||++ .+ .++++|++++ +||||+||.+||+
T Consensus 96 ih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS~~vyg 146 (372)
T 3slg_A 96 LPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYG 146 (372)
T ss_dssp EECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECCGGGGB
T ss_pred EEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCcHHHhC
Confidence 9972 11 1799999999 9999999999986
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.81 E-value=7.9e-20 Score=151.90 Aligned_cols=97 Identities=25% Similarity=0.307 Sum_probs=85.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHHC--CCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC------
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVK--RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS------ 171 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~--G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a------ 171 (198)
++|||||||||||++++++|+++ |++|++++|++.+.......+++++.+|++|++++.++++++|+|||++
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~ 80 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISGPHYDN 80 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECCCCCSCH
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHHHHhcCCEEEEcCCCCcCc
Confidence 47999999999999999999999 9999999998876543334568999999999999999999999999982
Q ss_pred ----hhH--HHHHHHhCCCCeEEEEccccee
Q 029118 172 ----EGF--ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 172 ----~G~--lldAA~~~GVkRiV~vSS~~Vy 196 (198)
.++ ++++|+++|++||||+||.++|
T Consensus 81 ~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~ 111 (287)
T 2jl1_A 81 TLLIVQHANVVKAARDAGVKHIAYTGYAFAE 111 (287)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEEEETTGG
T ss_pred hHHHHHHHHHHHHHHHcCCCEEEEECCCCCC
Confidence 122 8899999999999999998875
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.80 E-value=1e-19 Score=145.11 Aligned_cols=94 Identities=6% Similarity=0.111 Sum_probs=81.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC--------
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-------- 171 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a-------- 171 (198)
|+||||||||+||++++++|+++|++|++++|++++..... ++++++.+|++|+++ +++.++|+|||++
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~~~~ 77 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-KDINILQKDIFDLTL--SDLSDQNVVVDAYGISPDEAE 77 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-SSSEEEECCGGGCCH--HHHTTCSEEEECCCSSTTTTT
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-CCCeEEeccccChhh--hhhcCCCEEEECCcCCccccc
Confidence 57999999999999999999999999999999987765443 679999999999988 8999999999982
Q ss_pred ---hh--HHHHHHHhCCCCeEEEEccccee
Q 029118 172 ---EG--FISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 172 ---~G--~lldAA~~~GVkRiV~vSS~~Vy 196 (198)
.+ .++++|+++|++|||++||.++|
T Consensus 78 ~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~ 107 (221)
T 3ew7_A 78 KHVTSLDHLISVLNGTVSPRLLVVGGAASL 107 (221)
T ss_dssp SHHHHHHHHHHHHCSCCSSEEEEECCCC--
T ss_pred hHHHHHHHHHHHHHhcCCceEEEEecceEE
Confidence 12 28999999999999999998664
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.80 E-value=3.7e-19 Score=150.55 Aligned_cols=99 Identities=15% Similarity=0.219 Sum_probs=85.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc--CccEEEEcC----h
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPS----E 172 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~--GvDaVIh~a----~ 172 (198)
+++|||||||||||++++++|+++|++|++++|+.......+..+++++.+|++|++++.++++ ++|+|||++ .
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a~~~~~ 80 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLRDVFTQENIEAVMHFAADSLV 80 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCTTSEEEECCTTCHHHHHHHHHHSCEEEEEECCCCCCH
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhhcCCCcEEEECCCCCHHHHHHHHhhcCCCEEEECCcccCc
Confidence 4689999999999999999999999999999997654333344478999999999999999998 999999982 0
Q ss_pred ----------------hH--HHHHHHhCCCCeEEEEcccceec
Q 029118 173 ----------------GF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 173 ----------------G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
++ ++++|++++++||||+||.++|.
T Consensus 81 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~ 123 (330)
T 2c20_A 81 GVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYG 123 (330)
T ss_dssp HHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGC
T ss_pred cccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeC
Confidence 11 78999999999999999999885
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1.9e-19 Score=149.18 Aligned_cols=96 Identities=23% Similarity=0.293 Sum_probs=84.6
Q ss_pred eEEEEcCCChHHHHHHHHHHHC--CCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC-------
Q 029118 101 AVLVTDGDSDIGQMVILSLIVK--RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS------- 171 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~--G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a------- 171 (198)
+|||||||||||++++++|+++ |++|++++|++++.......+++++.+|++|++++.++++++|+|||++
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~~~~ 80 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGVEKLLLISSSEVGQR 80 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECC-------
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCCCchHH
Confidence 4899999999999999999998 9999999998876543333568999999999999999999999999983
Q ss_pred -hhH--HHHHHHhCCCCeEEEEccccee
Q 029118 172 -EGF--ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 172 -~G~--lldAA~~~GVkRiV~vSS~~Vy 196 (198)
.++ ++++|+++|++||||+||.++|
T Consensus 81 ~~~~~~l~~a~~~~~~~~~v~~Ss~~~~ 108 (286)
T 2zcu_A 81 APQHRNVINAAKAAGVKFIAYTSLLHAD 108 (286)
T ss_dssp -CHHHHHHHHHHHHTCCEEEEEEETTTT
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCCCC
Confidence 222 8999999999999999998876
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=99.79 E-value=7.1e-19 Score=148.69 Aligned_cols=95 Identities=17% Similarity=0.116 Sum_probs=82.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC-------
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS------- 171 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a------- 171 (198)
+++|||||||||||++++++|+++|++|++++|++.... + .+++++.+|++ ++++.++++++|+|||++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~-~~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a~~~~~~~ 77 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA--I-NDYEYRVSDYT-LEDLINQLNDVDAVVHLAATRGSQG 77 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC--------CCEEEECCCC-HHHHHHHTTTCSEEEECCCCCCSSS
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc--C-CceEEEEcccc-HHHHHHhhcCCCEEEEccccCCCCC
Confidence 368999999999999999999999999999999854332 2 26999999999 999999999999999982
Q ss_pred ---------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 172 ---------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 ---------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.++ ++++|++++++||||+||.+||+
T Consensus 78 ~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg 114 (311)
T 3m2p_A 78 KISEFHDNEILTQNLYDACYENNISNIVYASTISAYS 114 (311)
T ss_dssp CGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCC
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhC
Confidence 122 89999999999999999999985
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=7.7e-19 Score=153.54 Aligned_cols=100 Identities=13% Similarity=0.009 Sum_probs=87.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC-----h
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-----E 172 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a-----~ 172 (198)
.+++|||||||||||++++++|+++|++|++++|++.+.......+++++.+|++|++++.++++++|+|||++ .
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~~~ 107 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGM 107 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCCCCCCH
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhccCCceEEECCCCCHHHHHHHhCCCCEEEECceecCcc
Confidence 46789999999999999999999999999999998765433334568999999999999999999999999982 0
Q ss_pred ----------------hH--HHHHHHhCCCCeEEEEcccceec
Q 029118 173 ----------------GF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 173 ----------------G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
++ ++++|++++++||||+||.++|.
T Consensus 108 ~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~ 150 (379)
T 2c5a_A 108 GFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYP 150 (379)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSC
T ss_pred cccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeC
Confidence 11 78999999999999999998875
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.79 E-value=2.8e-19 Score=152.11 Aligned_cols=96 Identities=19% Similarity=0.257 Sum_probs=81.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc------cc-cCCceEEEEccCCCHHHHHHhhcCccEEEEcC
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM------ES-FGTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~------~~-~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a 171 (198)
+++|||||||||||++++++|+++||+|++++|+++... .. ...+++++.+|++|++++.++++++|+|||++
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~A 88 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGCDFVFHVA 88 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTCSEEEEES
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCCCEEEEeC
Confidence 578999999999999999999999999999999875421 11 12468999999999999999999999999972
Q ss_pred -------------------hhH--HHHHHHhCC-CCeEEEEcccc
Q 029118 172 -------------------EGF--ISNAGSLKG-VQHVILLSQGA 194 (198)
Q Consensus 172 -------------------~G~--lldAA~~~G-VkRiV~vSS~~ 194 (198)
.|+ ++++|++++ ++||||+||.+
T Consensus 89 ~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~ 133 (338)
T 2rh8_A 89 TPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAA 133 (338)
T ss_dssp SCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHH
T ss_pred CccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHH
Confidence 122 789998886 99999999976
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.6e-19 Score=145.01 Aligned_cols=94 Identities=12% Similarity=0.136 Sum_probs=83.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC-h------
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-E------ 172 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a-~------ 172 (198)
|+||||||||+||++++++|+++|++|++++|++++.......+++++.+|++|+++ +++.++|+|||++ .
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~~~~ 78 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTE--ADLDSVDAVVDALSVPWGSGR 78 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCH--HHHTTCSEEEECCCCCTTSSC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccH--hhcccCCEEEECCccCCCcch
Confidence 579999999999999999999999999999999877665566789999999999988 8999999999982 1
Q ss_pred ------hH--HHHHHHhCCCCeEEEEccccee
Q 029118 173 ------GF--ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 173 ------G~--lldAA~~~GVkRiV~vSS~~Vy 196 (198)
++ ++++|+++| +|||++||.+++
T Consensus 79 ~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~~~ 109 (224)
T 3h2s_A 79 GYLHLDFATHLVSLLRNSD-TLAVFILGSASL 109 (224)
T ss_dssp THHHHHHHHHHHHTCTTCC-CEEEEECCGGGS
T ss_pred hhHHHHHHHHHHHHHHHcC-CcEEEEecceee
Confidence 12 889999999 999999997653
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=3.7e-19 Score=149.46 Aligned_cols=96 Identities=16% Similarity=0.156 Sum_probs=85.2
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC--------
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-------- 171 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a-------- 171 (198)
|+|||||||||||++++++|+++|++|++++|++.........+++++.+|++|++ +.+++++ |+|||++
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~-~~~~~~~-d~vih~A~~~~~~~~ 78 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFVNPSAELHVRDLKDYS-WGAGIKG-DVVFHFAANPEVRLS 78 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGSCTTSEEECCCTTSTT-TTTTCCC-SEEEECCSSCSSSGG
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhcCCCceEEECccccHH-HHhhcCC-CEEEECCCCCCchhh
Confidence 57999999999999999999999999999999887655555678999999999999 9999999 9999982
Q ss_pred ------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 172 ------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 ------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.++ ++++|++++++||||+||.++|+
T Consensus 79 ~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg 118 (312)
T 3ko8_A 79 TTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYG 118 (312)
T ss_dssp GSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGC
T ss_pred hhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhC
Confidence 112 78999999999999999999985
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=1.2e-18 Score=140.97 Aligned_cols=98 Identities=15% Similarity=0.143 Sum_probs=87.0
Q ss_pred CeEEEEcCCChHHHHHHHHHH-HCCCcEEEEEeCCc-ccccc--cCCceEEEEccCCCHHHHHHhhcCccEEEEcCh---
Q 029118 100 DAVLVTDGDSDIGQMVILSLI-VKRTRIKALVKDKR-NAMES--FGTYVESMAGDASNKKFLKTALRGVRSIICPSE--- 172 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll-~~G~~VralvR~~~-~a~~~--~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a~--- 172 (198)
++||||||||+||++++++|+ ++|++|++++|+++ +.... .+.+++++.+|++|++++.++++++|+|||++.
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~~n 85 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAMESG 85 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCCCH
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCCCC
Confidence 359999999999999999999 89999999999987 65443 467899999999999999999999999999832
Q ss_pred ---hHHHHHHHhCCCCeEEEEcccceec
Q 029118 173 ---GFISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 173 ---G~lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
-.++++++++|++|||++||.++|.
T Consensus 86 ~~~~~~~~~~~~~~~~~iv~iSs~~~~~ 113 (221)
T 3r6d_A 86 SDMASIVKALSRXNIRRVIGVSMAGLSG 113 (221)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEETTTTS
T ss_pred hhHHHHHHHHHhcCCCeEEEEeeceecC
Confidence 2388999999999999999998874
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.78 E-value=6.8e-19 Score=148.06 Aligned_cols=99 Identities=16% Similarity=0.253 Sum_probs=84.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC-CcEEEEEeCCcccc--cccCCceEEEEccCCCHHHHHHhhcCccEEEEcCh---
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAM--ESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE--- 172 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G-~~VralvR~~~~a~--~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a~--- 172 (198)
+++||||||||+||++++++|+++| ++|++++|++++.. .....+++++.+|++|++++.++++|+|+|||++.
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~ 84 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTNYWE 84 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCCCCc
Confidence 4689999999999999999999998 99999999986531 22235689999999999999999999999999831
Q ss_pred ---------h--HHHHHHHhCCCCeEEEEcccceec
Q 029118 173 ---------G--FISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 173 ---------G--~lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
+ .++++|+++|++||||+|+.++|.
T Consensus 85 ~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~ 120 (299)
T 2wm3_A 85 SCSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKK 120 (299)
T ss_dssp HTCHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHH
T ss_pred cccchHHHHHHHHHHHHHHHcCCCEEEEEcCccccc
Confidence 1 278999999999999988877653
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=1.5e-18 Score=151.32 Aligned_cols=101 Identities=10% Similarity=0.090 Sum_probs=83.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCC-CcEEEEEeCCccccccc--CCceEEEEccCCCHHHHHHhhcCccEEEEcC--
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTALRGVRSIICPS-- 171 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G-~~VralvR~~~~a~~~~--g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a-- 171 (198)
..+++|||||||||||++++++|+++| ++|++++|++......+ ..+++++.+|++|++.+.++++++|+|||++
T Consensus 30 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~A~~ 109 (377)
T 2q1s_A 30 LANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEYDYVFHLATY 109 (377)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSCCSEEEECCCC
T ss_pred hCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhCCCEEEECCCc
Confidence 456789999999999999999999999 99999999875532222 4679999999999999999999999999982
Q ss_pred --h----------------hH--HHHHHHhC-CCCeEEEEcccceec
Q 029118 172 --E----------------GF--ISNAGSLK-GVQHVILLSQGAVVC 197 (198)
Q Consensus 172 --~----------------G~--lldAA~~~-GVkRiV~vSS~~Vy~ 197 (198)
. ++ ++++|+++ +++||||+||.+||+
T Consensus 110 ~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg 156 (377)
T 2q1s_A 110 HGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIA 156 (377)
T ss_dssp SCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC----
T ss_pred cCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcC
Confidence 0 12 78999998 999999999999885
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.77 E-value=5.7e-19 Score=144.13 Aligned_cols=101 Identities=14% Similarity=0.171 Sum_probs=84.5
Q ss_pred cccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCce-EEEEccCCCHHHHHHhhcCccEEEEcC-
Q 029118 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYV-ESMAGDASNKKFLKTALRGVRSIICPS- 171 (198)
Q Consensus 94 ~~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~v-evV~GDl~D~~sL~~AL~GvDaVIh~a- 171 (198)
.....+++||||||||+||++++++|+++|++|++++|++++.......++ +++.+|++ +.+.+++.++|+|||++
T Consensus 16 ~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~--~~~~~~~~~~D~vi~~ag 93 (236)
T 3e8x_A 16 NLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLE--EDFSHAFASIDAVVFAAG 93 (236)
T ss_dssp -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTT--SCCGGGGTTCSEEEECCC
T ss_pred ccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccH--HHHHHHHcCCCEEEECCC
Confidence 345668899999999999999999999999999999999877654444578 99999999 78999999999999982
Q ss_pred ---------------hhH--HHHHHHhCCCCeEEEEccccee
Q 029118 172 ---------------EGF--ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 172 ---------------~G~--lldAA~~~GVkRiV~vSS~~Vy 196 (198)
.++ ++++|++++++||||+||.+++
T Consensus 94 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~ 135 (236)
T 3e8x_A 94 SGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTV 135 (236)
T ss_dssp CCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCS
T ss_pred CCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCC
Confidence 122 8899999999999999998765
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.77 E-value=1.4e-18 Score=147.65 Aligned_cols=99 Identities=16% Similarity=0.209 Sum_probs=85.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-------cCCceEEEEccCCCHHHHHHhhc--CccEEEE
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR--GVRSIIC 169 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-------~g~~vevV~GDl~D~~sL~~AL~--GvDaVIh 169 (198)
+++|||||||||||++++++|+++|++|++++|++...... .+.+++++.+|++|++++.++++ ++|+|||
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 84 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAIH 84 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEEE
T ss_pred CcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEEE
Confidence 56899999999999999999999999999999987654221 24578999999999999999998 9999999
Q ss_pred cC--------------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 170 PS--------------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 170 ~a--------------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
++ .++ ++++|++++++||||+||.++|+
T Consensus 85 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g 134 (341)
T 3enk_A 85 FAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYG 134 (341)
T ss_dssp CCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBC
T ss_pred CccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEec
Confidence 83 012 78999999999999999999884
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=1.6e-18 Score=148.82 Aligned_cols=101 Identities=18% Similarity=0.165 Sum_probs=85.6
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc----cc---c----CCceEEEEccCCCHHHHHHhhcCcc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM----ES---F----GTYVESMAGDASNKKFLKTALRGVR 165 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~----~~---~----g~~vevV~GDl~D~~sL~~AL~GvD 165 (198)
..+++|||||||||||++++++|+++|++|++++|++.... .. + +.+++++.+|++|++++.++++++|
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d 104 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVD 104 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCS
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCCC
Confidence 45789999999999999999999999999999999764211 10 0 2568999999999999999999999
Q ss_pred EEEEcC--------------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 166 SIICPS--------------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 166 aVIh~a--------------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
+|||++ .++ ++++|++.+++||||+||.++|.
T Consensus 105 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~ 158 (352)
T 1sb8_A 105 YVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYG 158 (352)
T ss_dssp EEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGT
T ss_pred EEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcC
Confidence 999982 011 78999999999999999999885
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=2e-18 Score=147.64 Aligned_cols=103 Identities=15% Similarity=0.256 Sum_probs=87.5
Q ss_pred cccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc---cccCCceEEEEccCCCHHHHHHhhc--CccEEE
Q 029118 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALR--GVRSII 168 (198)
Q Consensus 94 ~~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~---~~~g~~vevV~GDl~D~~sL~~AL~--GvDaVI 168 (198)
-+...+++|||||||||||++++++|+++|++|++++|++.... ..+ .+++++.+|++|++++.++++ ++|+||
T Consensus 15 ~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l-~~v~~~~~Dl~d~~~~~~~~~~~~~D~vi 93 (330)
T 2pzm_A 15 VPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPV-AGLSVIEGSVTDAGLLERAFDSFKPTHVV 93 (330)
T ss_dssp CSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSC-TTEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred cccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhcc-CCceEEEeeCCCHHHHHHHHhhcCCCEEE
Confidence 34566789999999999999999999999999999999764432 112 468999999999999999999 999999
Q ss_pred EcC----h-------------hH--HHHHHHhCCCCeEEEEcccceec
Q 029118 169 CPS----E-------------GF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 169 h~a----~-------------G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
|++ . ++ ++++|.+++++||||+||.++|.
T Consensus 94 h~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~ 141 (330)
T 2pzm_A 94 HSAAAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQTALCYG 141 (330)
T ss_dssp ECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGC
T ss_pred ECCccCCCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhC
Confidence 982 1 12 78999999999999999999885
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.6e-18 Score=146.15 Aligned_cols=99 Identities=11% Similarity=0.045 Sum_probs=82.2
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcC--ccEEEEcC-
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG--VRSIICPS- 171 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~G--vDaVIh~a- 171 (198)
...+.++|||||||||||++++++|+++|++|++++|++.. .. + +++++.+|++|++++.+++++ +|+|||++
T Consensus 8 ~~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~-l--~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~ 83 (321)
T 2pk3_A 8 HHHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL-P--NVEMISLDIMDSQRVKKVISDIKPDYIFHLAA 83 (321)
T ss_dssp -----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC-T--TEEEEECCTTCHHHHHHHHHHHCCSEEEECCS
T ss_pred cccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc-c--eeeEEECCCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 46778899999999999999999999999999999998765 22 2 689999999999999999987 89999982
Q ss_pred -------------------hhH--HHHHHHhC-CCCeEEEEcccceec
Q 029118 172 -------------------EGF--ISNAGSLK-GVQHVILLSQGAVVC 197 (198)
Q Consensus 172 -------------------~G~--lldAA~~~-GVkRiV~vSS~~Vy~ 197 (198)
.++ ++++|++. +++||||+||.++|+
T Consensus 84 ~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g 131 (321)
T 2pk3_A 84 KSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYG 131 (321)
T ss_dssp CCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTB
T ss_pred ccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcC
Confidence 012 78888775 799999999999885
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=6.3e-19 Score=150.24 Aligned_cols=98 Identities=19% Similarity=0.341 Sum_probs=80.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc---c--ccC---CceEEEEccCCCHHHHHHhhcCccEEEE
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---E--SFG---TYVESMAGDASNKKFLKTALRGVRSIIC 169 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~---~--~~g---~~vevV~GDl~D~~sL~~AL~GvDaVIh 169 (198)
.+++|||||||||||++++++|+++||+|++++|++.... . .+. .+++++.+|++|++++.++++++|+|||
T Consensus 4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih 83 (337)
T 2c29_D 4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGVFH 83 (337)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSEEEE
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCEEEE
Confidence 3578999999999999999999999999999999876321 1 111 2589999999999999999999999999
Q ss_pred cC-------------------hhH--HHHHHHhCC-CCeEEEEcccce
Q 029118 170 PS-------------------EGF--ISNAGSLKG-VQHVILLSQGAV 195 (198)
Q Consensus 170 ~a-------------------~G~--lldAA~~~G-VkRiV~vSS~~V 195 (198)
++ .|+ ++++|++++ ++||||+||.++
T Consensus 84 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~ 131 (337)
T 2c29_D 84 VATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGT 131 (337)
T ss_dssp CCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGG
T ss_pred eccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhh
Confidence 72 112 788888887 999999999863
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.77 E-value=2.9e-18 Score=146.87 Aligned_cols=104 Identities=10% Similarity=0.150 Sum_probs=85.5
Q ss_pred cccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccC--CceEEEEccCCCHHHHHHhhcC--ccEEEE
Q 029118 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTALRG--VRSIIC 169 (198)
Q Consensus 94 ~~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g--~~vevV~GDl~D~~sL~~AL~G--vDaVIh 169 (198)
+....+++|||||||||||++++++|+++|++|++++|++......+. .+++++.+|++|++++.+++++ +|+|||
T Consensus 16 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih 95 (333)
T 2q1w_A 16 PRGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVH 95 (333)
T ss_dssp -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred eecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEE
Confidence 445667899999999999999999999999999999998654322221 4689999999999999999998 999999
Q ss_pred cC----h-------------hH--HHHHHHhCCCCeEEEEcccceec
Q 029118 170 PS----E-------------GF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 170 ~a----~-------------G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
++ . ++ ++++|.+++++||||+||.++|.
T Consensus 96 ~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g 142 (333)
T 2q1w_A 96 TAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYG 142 (333)
T ss_dssp CCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGC
T ss_pred CceecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhC
Confidence 82 1 12 78999999999999999999885
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=2.3e-18 Score=147.85 Aligned_cols=101 Identities=17% Similarity=0.112 Sum_probs=85.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-----cCCceEEEEccCCCHHHHHHhhcC--ccEEEE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTALRG--VRSIIC 169 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-----~g~~vevV~GDl~D~~sL~~AL~G--vDaVIh 169 (198)
..+++|||||||||||++++++|+++|++|++++|++.+.... .+.+++++.+|++|++++.+++++ +|+|||
T Consensus 7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 86 (357)
T 1rkx_A 7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFH 86 (357)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEEEE
Confidence 3467899999999999999999999999999999987654321 135789999999999999999987 899999
Q ss_pred cC--------------------hhH--HHHHHHhCC-CCeEEEEcccceec
Q 029118 170 PS--------------------EGF--ISNAGSLKG-VQHVILLSQGAVVC 197 (198)
Q Consensus 170 ~a--------------------~G~--lldAA~~~G-VkRiV~vSS~~Vy~ 197 (198)
++ .++ ++++|++.+ ++||||+||.+||.
T Consensus 87 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg 137 (357)
T 1rkx_A 87 MAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYD 137 (357)
T ss_dssp CCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBC
T ss_pred CCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhC
Confidence 82 011 788888876 99999999999885
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=99.77 E-value=1e-18 Score=146.05 Aligned_cols=94 Identities=17% Similarity=0.212 Sum_probs=84.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcC-ccEEEEcC------
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG-VRSIICPS------ 171 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~G-vDaVIh~a------ 171 (198)
+++||||| +||||++++++|+++|++|++++|++.+. ..+++++.+|++|++++.+++++ +|+|||++
T Consensus 3 ~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~~~~~~ 77 (286)
T 3gpi_A 3 LSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM----PAGVQTLIADVTRPDTLASIVHLRPEILVYCVAASEYS 77 (286)
T ss_dssp CCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC----CTTCCEEECCTTCGGGCTTGGGGCCSEEEECHHHHHHC
T ss_pred CCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc----ccCCceEEccCCChHHHHHhhcCCCCEEEEeCCCCCCC
Confidence 46899999 59999999999999999999999987653 46799999999999999999998 99999982
Q ss_pred ---------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 172 ---------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 ---------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.++ ++++|++.+++||||+||.+||+
T Consensus 78 ~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg 114 (286)
T 3gpi_A 78 DEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYG 114 (286)
T ss_dssp -----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCC
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEc
Confidence 122 89999999999999999999985
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.76 E-value=2.1e-18 Score=140.37 Aligned_cols=100 Identities=14% Similarity=0.163 Sum_probs=86.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC--cEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC----
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS---- 171 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~--~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a---- 171 (198)
.+++||||||||+||++++++|+++|+ +|++++|++++.......+++++.+|++|++++.++++++|+|||++
T Consensus 17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~ 96 (242)
T 2bka_A 17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTTR 96 (242)
T ss_dssp TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCCCH
T ss_pred cCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHhcCCCEEEECCCccc
Confidence 457899999999999999999999999 99999998866543323468999999999999999999999999982
Q ss_pred -------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 172 -------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 -------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.++ ++++|++.+++|||++||.++|.
T Consensus 97 ~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~ 137 (242)
T 2bka_A 97 GKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADK 137 (242)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCT
T ss_pred ccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCC
Confidence 011 78889999999999999998874
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=3.7e-18 Score=145.45 Aligned_cols=98 Identities=17% Similarity=0.188 Sum_probs=82.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHC--CCcEEEEEeCCcc-----cccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVK--RTRIKALVKDKRN-----AMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~--G~~VralvR~~~~-----a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a 171 (198)
+++|||||||||||++++++|+++ |++|++++|++.. .....+.+++++.+|++|++++.++++++|+|||++
T Consensus 4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A 83 (348)
T 1oc2_A 4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYA 83 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhhcCCEEEECC
Confidence 578999999999999999999998 8999999997531 112223579999999999999999999999999982
Q ss_pred --------------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 172 --------------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 --------------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.++ ++++|.+.++ ||||+||.+||.
T Consensus 84 ~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~v~~SS~~vyg 130 (348)
T 1oc2_A 84 AESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYG 130 (348)
T ss_dssp SCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGC
T ss_pred cccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEecccceeC
Confidence 012 7899988898 999999999884
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=2.1e-18 Score=146.24 Aligned_cols=104 Identities=14% Similarity=0.106 Sum_probs=83.4
Q ss_pred cccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc----cc--cCCceEEEEccCCCHHHHHHhhcC--cc
Q 029118 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM----ES--FGTYVESMAGDASNKKFLKTALRG--VR 165 (198)
Q Consensus 94 ~~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~----~~--~g~~vevV~GDl~D~~sL~~AL~G--vD 165 (198)
-+..++++|||||||||||++++++|+++|++|++++|++.+.. .. .+.+++++.+|++|++++.+++++ +|
T Consensus 9 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 88 (335)
T 1rpn_A 9 HHGSMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQ 88 (335)
T ss_dssp ------CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred cccccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCCC
Confidence 45678899999999999999999999999999999999875421 11 134689999999999999999987 59
Q ss_pred EEEEcC--------------------hhH--HHHHHHhCCC-CeEEEEcccceec
Q 029118 166 SIICPS--------------------EGF--ISNAGSLKGV-QHVILLSQGAVVC 197 (198)
Q Consensus 166 aVIh~a--------------------~G~--lldAA~~~GV-kRiV~vSS~~Vy~ 197 (198)
+|||++ .++ ++++|++.++ +||||+||.++|+
T Consensus 89 ~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g 143 (335)
T 1rpn_A 89 EVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFG 143 (335)
T ss_dssp EEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGC
T ss_pred EEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhC
Confidence 999982 012 7899999897 9999999999885
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.76 E-value=3e-18 Score=146.22 Aligned_cols=102 Identities=15% Similarity=0.134 Sum_probs=80.9
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCC--CcEEEEEeCCccc-ccc-----cCCceEEEEccCCCHHHHHHhhcC--cc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNA-MES-----FGTYVESMAGDASNKKFLKTALRG--VR 165 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G--~~VralvR~~~~a-~~~-----~g~~vevV~GDl~D~~sL~~AL~G--vD 165 (198)
...+++|||||||||||++|+++|+++| ++|+++.|..... ... ..++++++.+|++|++.+.+++++ +|
T Consensus 21 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 100 (346)
T 4egb_A 21 QSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQ 100 (346)
T ss_dssp ---CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTCC
T ss_pred ccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCCC
Confidence 3556789999999999999999999999 5566666544211 111 125799999999999999999998 99
Q ss_pred EEEEcC--------------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 166 SIICPS--------------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 166 aVIh~a--------------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
+|||++ .++ ++++|++++++||||+||.+||.
T Consensus 101 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~ 154 (346)
T 4egb_A 101 VIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYG 154 (346)
T ss_dssp EEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGC
T ss_pred EEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhC
Confidence 999982 112 88999999999999999999986
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.76 E-value=6.8e-18 Score=145.79 Aligned_cols=100 Identities=18% Similarity=0.203 Sum_probs=85.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHH--CCCcEEEEEeCCc-------------ccccccCCceEEEEccCCCHHHHHHh-
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIV--KRTRIKALVKDKR-------------NAMESFGTYVESMAGDASNKKFLKTA- 160 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~--~G~~VralvR~~~-------------~a~~~~g~~vevV~GDl~D~~sL~~A- 160 (198)
..+++|||||||||||++++++|++ +|++|++++|++. ......+.+++++.+|++|++.+.++
T Consensus 8 ~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~ 87 (362)
T 3sxp_A 8 LENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRLE 87 (362)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHHT
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHhh
Confidence 4568999999999999999999999 9999999999764 12223345689999999999999999
Q ss_pred hcCccEEEEcC------------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 161 LRGVRSIICPS------------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 161 L~GvDaVIh~a------------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
+.++|+|||++ .++ ++++|++.+++ |||+||.+||+
T Consensus 88 ~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS~~vyg 143 (362)
T 3sxp_A 88 KLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASSAGVYG 143 (362)
T ss_dssp TSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEEGGGGC
T ss_pred ccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCcHHHhC
Confidence 89999999982 122 88999999998 99999999985
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.2e-18 Score=146.55 Aligned_cols=97 Identities=23% Similarity=0.303 Sum_probs=78.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEe-CCcc---ccc--ccC---CceEEEEccCCCHHHHHHhhcCccEEEE
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK-DKRN---AME--SFG---TYVESMAGDASNKKFLKTALRGVRSIIC 169 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR-~~~~---a~~--~~g---~~vevV~GDl~D~~sL~~AL~GvDaVIh 169 (198)
+++|||||||||||++++++|+++|++|++++| ++.. ... .+. .+++++.+|++|++++.++++++|+|||
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih 80 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIFH 80 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEEE
T ss_pred CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEEEE
Confidence 368999999999999999999999999999998 6532 111 111 2578999999999999999999999999
Q ss_pred cC-------------------hhH--HHHHHHhC-CCCeEEEEcccce
Q 029118 170 PS-------------------EGF--ISNAGSLK-GVQHVILLSQGAV 195 (198)
Q Consensus 170 ~a-------------------~G~--lldAA~~~-GVkRiV~vSS~~V 195 (198)
++ .|+ ++++|+++ +++||||+||.++
T Consensus 81 ~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~ 128 (322)
T 2p4h_X 81 TASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSA 128 (322)
T ss_dssp CCCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGG
T ss_pred cCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHH
Confidence 72 011 67888887 8999999999874
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=2.8e-18 Score=143.58 Aligned_cols=96 Identities=15% Similarity=0.230 Sum_probs=85.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC-------
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS------- 171 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a------- 171 (198)
+++||||||||+||++++++|+++|++|++++|++.+.. +.+++++.+|++|++++.++++++|+|||++
T Consensus 3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag~~~~~~ 79 (267)
T 3rft_A 3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA---GPNEECVQCDLADANAVNAMVAGCDGIVHLGGISVEKP 79 (267)
T ss_dssp EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC---CTTEEEEECCTTCHHHHHHHHTTCSEEEECCSCCSCCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc---CCCCEEEEcCCCCHHHHHHHHcCCCEEEECCCCcCcCC
Confidence 468999999999999999999999999999999886543 5679999999999999999999999999982
Q ss_pred ---------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 172 ---------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 ---------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.|+ ++++|++++++||||+||..+|+
T Consensus 80 ~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g 116 (267)
T 3rft_A 80 FEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIG 116 (267)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGT
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhC
Confidence 122 78999999999999999998873
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=5.6e-18 Score=144.30 Aligned_cols=99 Identities=21% Similarity=0.214 Sum_probs=83.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc------ccc-------ccCCceEEEEccCCCHHHHHHhhc--C
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN------AME-------SFGTYVESMAGDASNKKFLKTALR--G 163 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~------a~~-------~~g~~vevV~GDl~D~~sL~~AL~--G 163 (198)
+++|||||||||||++++++|+++|++|++++|+... ... ..+.+++++.+|++|++++.++++ +
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYS 81 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhcC
Confidence 3689999999999999999999999999999986533 110 124568999999999999999998 8
Q ss_pred ccEEEEcC--------------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 164 VRSIICPS--------------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 164 vDaVIh~a--------------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
+|+|||++ .++ ++++|++++++||||+||.++|+
T Consensus 82 ~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g 137 (348)
T 1ek6_A 82 FMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYG 137 (348)
T ss_dssp EEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGC
T ss_pred CCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhC
Confidence 99999982 011 78899999999999999999885
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.75 E-value=1.8e-18 Score=146.08 Aligned_cols=101 Identities=14% Similarity=0.189 Sum_probs=84.5
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-------cCCceEEE-EccCCCHHHHHHhhcCccEE
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESM-AGDASNKKFLKTALRGVRSI 167 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-------~g~~vevV-~GDl~D~~sL~~AL~GvDaV 167 (198)
...+++|||||||||||++++++|+++|++|++++|++.+.... .+.+++++ .+|++|++.+.++++++|+|
T Consensus 8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 87 (342)
T 1y1p_A 8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGV 87 (342)
T ss_dssp SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEE
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEE
Confidence 34567899999999999999999999999999999986543211 13568888 89999999999999999999
Q ss_pred EEcC-----------------hhH--HHHHHH-hCCCCeEEEEccccee
Q 029118 168 ICPS-----------------EGF--ISNAGS-LKGVQHVILLSQGAVV 196 (198)
Q Consensus 168 Ih~a-----------------~G~--lldAA~-~~GVkRiV~vSS~~Vy 196 (198)
||++ .++ ++++|. ..+++||||+||.++|
T Consensus 88 ih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~ 136 (342)
T 1y1p_A 88 AHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSA 136 (342)
T ss_dssp EECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGT
T ss_pred EEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHh
Confidence 9982 122 788887 4789999999999887
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=1.1e-17 Score=142.22 Aligned_cols=98 Identities=22% Similarity=0.264 Sum_probs=82.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHC---C---CcEEEEEeCCcc-----cccc-cCCceEEEEccCCCHHHHHHhhcCccEE
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVK---R---TRIKALVKDKRN-----AMES-FGTYVESMAGDASNKKFLKTALRGVRSI 167 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~---G---~~VralvR~~~~-----a~~~-~g~~vevV~GDl~D~~sL~~AL~GvDaV 167 (198)
|+|||||||||||++++++|+++ | ++|++++|++.. .... .+.+++++.+|++|++++.+++.++|+|
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V 80 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI 80 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHhcCCCEE
Confidence 57999999999999999999997 8 999999996521 1111 1357999999999999999999999999
Q ss_pred EEcC--------------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 168 ICPS--------------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 168 Ih~a--------------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
||++ .++ ++++|++.+++||||+||.++|+
T Consensus 81 ih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg 132 (337)
T 1r6d_A 81 VHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYG 132 (337)
T ss_dssp EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGC
T ss_pred EECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhC
Confidence 9982 112 78999999999999999998885
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.75 E-value=2.3e-18 Score=144.28 Aligned_cols=96 Identities=15% Similarity=0.068 Sum_probs=83.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHHC--CCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc--CccEEEEcC----
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVK--RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPS---- 171 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~--G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~--GvDaVIh~a---- 171 (198)
++|||||||||||++++++|+++ |++|++++|++.+.. ...+++++.+|++|++++.++++ ++|+|||++
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~ 80 (312)
T 2yy7_A 3 PKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD--VVNSGPFEVVNALDFNQIEHLVEVHKITDIYLMAALLS 80 (312)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH--HHHSSCEEECCTTCHHHHHHHHHHTTCCEEEECCCCCH
T ss_pred ceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc--ccCCCceEEecCCCHHHHHHHHhhcCCCEEEECCccCC
Confidence 67999999999999999999999 999999999876532 12357899999999999999998 999999982
Q ss_pred ---------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 172 ---------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 ---------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.++ ++++|++++++||||+||.++|.
T Consensus 81 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~ 123 (312)
T 2yy7_A 81 ATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFG 123 (312)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCC
T ss_pred CchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhC
Confidence 111 78999999999999999999885
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=4.7e-18 Score=143.35 Aligned_cols=98 Identities=22% Similarity=0.235 Sum_probs=82.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc--CccEEEEcC------
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPS------ 171 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~--GvDaVIh~a------ 171 (198)
|+|||||||||||++++++|+++|++|+++.|...........+++++.+|++|++++.++++ ++|+|||++
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~ 80 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENVPKGVPFFRVDLRDKEGVERAFREFRPTHVSHQAAQASVK 80 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGGSCTTCCEECCCTTCHHHHHHHHHHHCCSEEEECCSCCCHH
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhhcccCeEEEECCCCCHHHHHHHHHhcCCCEEEECccccCch
Confidence 479999999999999999999999999999985433222333568899999999999999998 899999982
Q ss_pred --------------hhH--HHHHHHhCCCCeEEEEccc-ceec
Q 029118 172 --------------EGF--ISNAGSLKGVQHVILLSQG-AVVC 197 (198)
Q Consensus 172 --------------~G~--lldAA~~~GVkRiV~vSS~-~Vy~ 197 (198)
.|+ ++++|++++++||||+||. ++|.
T Consensus 81 ~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g 123 (311)
T 2p5y_A 81 VSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYG 123 (311)
T ss_dssp HHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHC
T ss_pred hhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcC
Confidence 012 7899999999999999998 7764
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.75 E-value=8.4e-18 Score=142.41 Aligned_cols=97 Identities=14% Similarity=0.102 Sum_probs=82.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHC-CCcEEEEEeCCccccccc-CCceEEEEccCCCH-HHHHHhhcCccEEEEcC-----
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESF-GTYVESMAGDASNK-KFLKTALRGVRSIICPS----- 171 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~-G~~VralvR~~~~a~~~~-g~~vevV~GDl~D~-~sL~~AL~GvDaVIh~a----- 171 (198)
|+|||||||||||++++++|+++ |++|++++|++.+..... ..+++++.+|++|+ +.+.++++++|+|||++
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~A~~~~~ 80 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATP 80 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCCCH
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhccCCCEEEEcccccCc
Confidence 57999999999999999999998 899999999886654322 35799999999984 67899999999999972
Q ss_pred ---------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 172 ---------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 ---------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.++ ++++|++++ +||||+||.++|+
T Consensus 81 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~SS~~v~g 122 (345)
T 2bll_A 81 IEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYG 122 (345)
T ss_dssp HHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGB
T ss_pred cchhcCHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecHHHcC
Confidence 012 788999999 9999999999885
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=9.1e-18 Score=145.75 Aligned_cols=99 Identities=20% Similarity=0.257 Sum_probs=83.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHH-HCCCcEEEEEeCCccc--------cccc------------CCc---eEEEEccCCCH
Q 029118 99 RDAVLVTDGDSDIGQMVILSLI-VKRTRIKALVKDKRNA--------MESF------------GTY---VESMAGDASNK 154 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll-~~G~~VralvR~~~~a--------~~~~------------g~~---vevV~GDl~D~ 154 (198)
+|+|||||||||||++++++|+ ++|++|++++|+.... ...+ ..+ ++++.+|++|+
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~ 81 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE 81 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence 4689999999999999999999 9999999999976432 1111 124 89999999999
Q ss_pred HHHHHhhc--C-ccEEEEcC----h----------------hH--HHHHHHhCCCCeEEEEcccceec
Q 029118 155 KFLKTALR--G-VRSIICPS----E----------------GF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 155 ~sL~~AL~--G-vDaVIh~a----~----------------G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
+++.++++ + +|+|||++ . ++ ++++|++++++||||+||.++|.
T Consensus 82 ~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g 149 (397)
T 1gy8_A 82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFG 149 (397)
T ss_dssp HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTB
T ss_pred HHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhC
Confidence 99999998 7 99999982 0 12 78999999999999999998875
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.6e-18 Score=143.84 Aligned_cols=95 Identities=16% Similarity=0.162 Sum_probs=83.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC--------
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-------- 171 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a-------- 171 (198)
++|||||||||||++++++|+++|++|++++|++.+.. ..+++++.+|++|++.+.++++++|+|||++
T Consensus 3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~~ 79 (267)
T 3ay3_A 3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA---EAHEEIVACDLADAQAVHDLVKDCDGIIHLGGVSVERPW 79 (267)
T ss_dssp EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC---CTTEEECCCCTTCHHHHHHHHTTCSEEEECCSCCSCCCH
T ss_pred ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc---CCCccEEEccCCCHHHHHHHHcCCCEEEECCcCCCCCCH
Confidence 47999999999999999999999999999999876432 2468999999999999999999999999982
Q ss_pred --------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 172 --------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 --------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.++ ++++|++++++||||+||.++|.
T Consensus 80 ~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~ 115 (267)
T 3ay3_A 80 NDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIG 115 (267)
T ss_dssp HHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGST
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhC
Confidence 112 78999999999999999998874
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.75 E-value=7.2e-18 Score=142.92 Aligned_cols=99 Identities=17% Similarity=0.081 Sum_probs=81.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc-c----ccc-cCCceEEEEccCCCHHHHHHhhcC--ccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-A----MES-FGTYVESMAGDASNKKFLKTALRG--VRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~-a----~~~-~g~~vevV~GDl~D~~sL~~AL~G--vDaVIh~ 170 (198)
+++|||||||||||++++++|+++|++|++++|+..+ . ... ...+++++.+|++|++++.+++++ +|+|||+
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 80 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHL 80 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhccCCCEEEEC
Confidence 4689999999999999999999999999999985421 1 111 123589999999999999999999 9999998
Q ss_pred C--------------------hhH--HHHHHHhCCCC-eEEEEcccceec
Q 029118 171 S--------------------EGF--ISNAGSLKGVQ-HVILLSQGAVVC 197 (198)
Q Consensus 171 a--------------------~G~--lldAA~~~GVk-RiV~vSS~~Vy~ 197 (198)
+ .++ ++++|++.+++ ||||+||.++|.
T Consensus 81 A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g 130 (347)
T 1orr_A 81 AGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYG 130 (347)
T ss_dssp CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGT
T ss_pred CcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhC
Confidence 2 011 78999999996 999999999885
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.74 E-value=6.1e-18 Score=144.09 Aligned_cols=102 Identities=15% Similarity=0.104 Sum_probs=85.5
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCC-------CcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhh-cCccEE
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKR-------TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL-RGVRSI 167 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G-------~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL-~GvDaV 167 (198)
...+++|||||||||||++++++|+++| ++|++++|++.......+.+++++.+|++|++++.+++ .++|+|
T Consensus 11 ~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~d~v 90 (342)
T 2hrz_A 11 YFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFSGAVDARAADLSAPGEAEKLVEARPDVI 90 (342)
T ss_dssp CCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCTTCCSEEEEEECCTTSTTHHHHHHHTCCSEE
T ss_pred CccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCccccccCCceeEEEcCCCCHHHHHHHHhcCCCEE
Confidence 3456789999999999999999999999 89999999875433223457899999999999999999 499999
Q ss_pred EEcC-------------------hhH--HHHHHHhCC-----CCeEEEEcccceec
Q 029118 168 ICPS-------------------EGF--ISNAGSLKG-----VQHVILLSQGAVVC 197 (198)
Q Consensus 168 Ih~a-------------------~G~--lldAA~~~G-----VkRiV~vSS~~Vy~ 197 (198)
||++ .|+ ++++|++.+ ++||||+||.++|.
T Consensus 91 ih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~ 146 (342)
T 2hrz_A 91 FHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFG 146 (342)
T ss_dssp EECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCC
T ss_pred EECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhC
Confidence 9982 112 788888776 99999999999885
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.74 E-value=5.4e-18 Score=143.10 Aligned_cols=97 Identities=19% Similarity=0.178 Sum_probs=80.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC-------
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS------- 171 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a------- 171 (198)
+++|||||||||||++++++|+++| .|++++|............++++.+|++| +.+.++++++|+|||++
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~d~vih~a~~~~~~~ 78 (313)
T 3ehe_A 1 MSLIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSSGNEEFVNEAARLVKADLAA-DDIKDYLKGAEEVWHIAANPDVRI 78 (313)
T ss_dssp --CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSSCCGGGSCTTEEEECCCTTT-SCCHHHHTTCSEEEECCCCCCCC-
T ss_pred CCEEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCCCChhhcCCCcEEEECcCCh-HHHHHHhcCCCEEEECCCCCChhh
Confidence 4689999999999999999999999 66666654433334445679999999999 99999999999999982
Q ss_pred -------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 172 -------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 -------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.++ ++++|++++++||||+||.++|+
T Consensus 79 ~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg 119 (313)
T 3ehe_A 79 GAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYG 119 (313)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGC
T ss_pred hhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhC
Confidence 122 78999999999999999999985
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=8.9e-18 Score=135.78 Aligned_cols=98 Identities=21% Similarity=0.359 Sum_probs=84.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHC--CCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC---h
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVK--RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS---E 172 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~--G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a---~ 172 (198)
.+++||||||||+||++++++|+++ |++|++++|++.+... .+.+++++.+|++|++++.++++++|+|||++ .
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~ 81 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK-IGGEADVFIGDITDADSINPAFQGIDALVILTSAVP 81 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHH-TTCCTTEEECCTTSHHHHHHHHTTCSEEEECCCCCC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhh-cCCCeeEEEecCCCHHHHHHHHcCCCEEEEeccccc
Confidence 4678999999999999999999999 8999999998765433 25568999999999999999999999999972 0
Q ss_pred ------------------------------hH--HHHHHHhCCCCeEEEEccccee
Q 029118 173 ------------------------------GF--ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 173 ------------------------------G~--lldAA~~~GVkRiV~vSS~~Vy 196 (198)
++ ++++|++++++||||+||.+++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~ 137 (253)
T 1xq6_A 82 KMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGT 137 (253)
T ss_dssp EECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTT
T ss_pred cccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCC
Confidence 11 7889999999999999998764
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=8e-18 Score=142.18 Aligned_cols=99 Identities=12% Similarity=0.030 Sum_probs=83.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc----ccc--CCceEEEEccCCCHHHHHHhhcCc--cEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM----ESF--GTYVESMAGDASNKKFLKTALRGV--RSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~----~~~--g~~vevV~GDl~D~~sL~~AL~Gv--DaVIh~ 170 (198)
+++|||||||||||++++++|+++|++|++++|++.+.. ... ..+++++.+|++|++++.++++++ |+|||+
T Consensus 3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 82 (345)
T 2z1m_A 3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVYNL 82 (345)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEEEC
Confidence 578999999999999999999999999999999876431 111 236899999999999999999874 999998
Q ss_pred C--------------------hhH--HHHHHHhCCC-CeEEEEcccceec
Q 029118 171 S--------------------EGF--ISNAGSLKGV-QHVILLSQGAVVC 197 (198)
Q Consensus 171 a--------------------~G~--lldAA~~~GV-kRiV~vSS~~Vy~ 197 (198)
+ .++ ++++|++.++ +||||+||.++|+
T Consensus 83 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg 132 (345)
T 2z1m_A 83 AAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFG 132 (345)
T ss_dssp CCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGC
T ss_pred CCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcC
Confidence 2 112 7888988898 9999999998884
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.73 E-value=9.1e-18 Score=140.75 Aligned_cols=95 Identities=19% Similarity=0.171 Sum_probs=80.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc------c---cccCCceEEEEccCCCHHHHHHhhcCccEEEE
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA------M---ESFGTYVESMAGDASNKKFLKTALRGVRSIIC 169 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a------~---~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh 169 (198)
+++||||||||+||++++++|+++|++|++++|++... . .....+++++.+|++|++++.++++|+|+|||
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~ 83 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIS 83 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEEEE
Confidence 56899999999999999999999999999999986421 0 11245799999999999999999999999999
Q ss_pred cC-----hh--HHHHHHHhCC-CCeEEEEcccc
Q 029118 170 PS-----EG--FISNAGSLKG-VQHVILLSQGA 194 (198)
Q Consensus 170 ~a-----~G--~lldAA~~~G-VkRiV~vSS~~ 194 (198)
++ .+ .++++|+++| |+|||+ |+.+
T Consensus 84 ~a~~~~~~~~~~l~~aa~~~g~v~~~v~-S~~g 115 (308)
T 1qyc_A 84 TVGSLQIESQVNIIKAIKEVGTVKRFFP-SEFG 115 (308)
T ss_dssp CCCGGGSGGGHHHHHHHHHHCCCSEEEC-SCCS
T ss_pred CCcchhhhhHHHHHHHHHhcCCCceEee-cccc
Confidence 83 22 3899999999 999995 6654
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=99.73 E-value=5.9e-18 Score=140.81 Aligned_cols=93 Identities=14% Similarity=0.086 Sum_probs=80.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC-------
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS------- 171 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a------- 171 (198)
+++|||||| ||||++++++|+++|++|++++|++.+.......+++++.+|++|.+ ++++|+|||++
T Consensus 5 ~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~-----~~~~d~vi~~a~~~~~~~ 78 (286)
T 3ius_A 5 TGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPS-----LDGVTHLLISTAPDSGGD 78 (286)
T ss_dssp CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCC-----CTTCCEEEECCCCBTTBC
T ss_pred cCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEecccccc-----cCCCCEEEECCCcccccc
Confidence 468999998 99999999999999999999999987654444467999999999954 89999999983
Q ss_pred --hhHHHHHHHh--CCCCeEEEEcccceec
Q 029118 172 --EGFISNAGSL--KGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 --~G~lldAA~~--~GVkRiV~vSS~~Vy~ 197 (198)
.-.++++|++ ++++||||+||.+||+
T Consensus 79 ~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg 108 (286)
T 3ius_A 79 PVLAALGDQIAARAAQFRWVGYLSTTAVYG 108 (286)
T ss_dssp HHHHHHHHHHHHTGGGCSEEEEEEEGGGGC
T ss_pred HHHHHHHHHHHhhcCCceEEEEeecceecC
Confidence 1138899988 8999999999999985
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=8.4e-18 Score=145.96 Aligned_cols=102 Identities=21% Similarity=0.196 Sum_probs=82.2
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc-----------------------cccCCceEEEEccCC
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-----------------------ESFGTYVESMAGDAS 152 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~-----------------------~~~g~~vevV~GDl~ 152 (198)
...+++|||||||||||++++++|+++|++|++++|...... ...+.+++++.+|++
T Consensus 8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~ 87 (404)
T 1i24_A 8 HHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDIC 87 (404)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTT
T ss_pred ccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCC
Confidence 356789999999999999999999999999999988643210 012456899999999
Q ss_pred CHHHHHHhhcC--ccEEEEcC-----------h------------hH--HHHHHHhCCC-CeEEEEcccceec
Q 029118 153 NKKFLKTALRG--VRSIICPS-----------E------------GF--ISNAGSLKGV-QHVILLSQGAVVC 197 (198)
Q Consensus 153 D~~sL~~AL~G--vDaVIh~a-----------~------------G~--lldAA~~~GV-kRiV~vSS~~Vy~ 197 (198)
|++++.+++++ +|+|||++ . |+ ++++|++.++ +||||+||.++|+
T Consensus 88 d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vyg 160 (404)
T 1i24_A 88 DFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYG 160 (404)
T ss_dssp SHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGC
T ss_pred CHHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHhC
Confidence 99999999998 99999982 0 11 7888988898 6999999999885
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=6.3e-18 Score=144.52 Aligned_cols=97 Identities=13% Similarity=0.124 Sum_probs=84.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC-----CcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcC---ccEEEEcC
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKR-----TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG---VRSIICPS 171 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G-----~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~G---vDaVIh~a 171 (198)
++|||||||||||++++++|+++| ++|++++|++.... ....+++++.+|++|++++.+++++ +|+|||++
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~vih~a 80 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-HEDNPINYVQCDISDPDDSQAKLSPLTDVTHVFYVT 80 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-CCSSCCEEEECCTTSHHHHHHHHTTCTTCCEEEECC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-cccCceEEEEeecCCHHHHHHHHhcCCCCCEEEECC
Confidence 689999999999999999999999 99999999876543 2235689999999999999999999 99999982
Q ss_pred ---------------hhH--HHHHHHhC--CCCeEE-------EEcccceec
Q 029118 172 ---------------EGF--ISNAGSLK--GVQHVI-------LLSQGAVVC 197 (198)
Q Consensus 172 ---------------~G~--lldAA~~~--GVkRiV-------~vSS~~Vy~ 197 (198)
.++ ++++|+++ +++||| |+||.+||+
T Consensus 81 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg 132 (364)
T 2v6g_A 81 WANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYG 132 (364)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTT
T ss_pred CCCcchHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhcc
Confidence 122 78999988 899998 799998874
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=9.8e-18 Score=141.08 Aligned_cols=92 Identities=23% Similarity=0.265 Sum_probs=80.7
Q ss_pred eEEEEcCCChHHHHHHHHHHHC--CCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc--CccEEEEcC-----
Q 029118 101 AVLVTDGDSDIGQMVILSLIVK--RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPS----- 171 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~--G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~--GvDaVIh~a----- 171 (198)
+|||||||||||++++++|+++ |++|++++|++.... +++++.+|++|++++.++++ ++|+|||++
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~ 75 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-----GIKFITLDVSNRDEIDRAVEKYSIDAIFHLAGILSA 75 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT-----TCCEEECCTTCHHHHHHHHHHTTCCEEEECCCCCHH
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc-----CceEEEecCCCHHHHHHHHhhcCCcEEEECCcccCC
Confidence 5899999999999999999998 899999998765431 47899999999999999998 999999982
Q ss_pred --------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 172 --------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 --------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.++ ++++|++++++||||+||.++|.
T Consensus 76 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~ 117 (317)
T 3ajr_A 76 KGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFG 117 (317)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCC
T ss_pred ccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhC
Confidence 012 78999999999999999999985
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=2.1e-17 Score=140.61 Aligned_cols=98 Identities=21% Similarity=0.231 Sum_probs=80.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc---c----ccCCceEEEEccCCCHHHHHHhhc--CccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---E----SFGTYVESMAGDASNKKFLKTALR--GVRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~---~----~~g~~vevV~GDl~D~~sL~~AL~--GvDaVIh~ 170 (198)
|+|||||||||||++++++|+++|++|+++.|...... . ..+..++++.+|++|++++.++++ ++|+|||+
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih~ 80 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF 80 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEEC
Confidence 47999999999999999999999999999987542211 1 113468899999999999999997 59999998
Q ss_pred C--------------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 171 S--------------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 171 a--------------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
+ .++ ++++|++++++||||+||.++|+
T Consensus 81 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g 129 (338)
T 1udb_A 81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYG 129 (338)
T ss_dssp CSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGC
T ss_pred CccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhC
Confidence 2 011 77889889999999999998884
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.72 E-value=3.2e-17 Score=139.02 Aligned_cols=99 Identities=18% Similarity=0.184 Sum_probs=81.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC--CcEEEEEeCCc--cccc--cc--CCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKR--NAME--SF--GTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G--~~VralvR~~~--~a~~--~~--g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+|+|||||||||||++++++|+++| ++|++++|++. .... .+ +.+++++.+|++|++++.+++.++|+|||+
T Consensus 3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~ 82 (336)
T 2hun_A 3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVRKVDGVVHL 82 (336)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHTCSEEEEC
T ss_pred CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhhCCCEEEEC
Confidence 4689999999999999999999986 89999998652 1111 11 346899999999999999999999999998
Q ss_pred C--------------------hhH--HHHHHHhCCC-CeEEEEcccceec
Q 029118 171 S--------------------EGF--ISNAGSLKGV-QHVILLSQGAVVC 197 (198)
Q Consensus 171 a--------------------~G~--lldAA~~~GV-kRiV~vSS~~Vy~ 197 (198)
+ .++ ++++|.+.++ +||||+||.+||+
T Consensus 83 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg 132 (336)
T 2hun_A 83 AAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYG 132 (336)
T ss_dssp CCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGC
T ss_pred CCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHC
Confidence 2 012 7888888775 7999999998875
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.72 E-value=1.2e-17 Score=140.29 Aligned_cols=95 Identities=16% Similarity=0.130 Sum_probs=80.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc-----cc---cccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AM---ESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~-----a~---~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+++||||||||+||++++++|+++|++|++++|++.. .. .....+++++.+|++|++++.++++|+|+|||+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~ 83 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISA 83 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEEEC
Confidence 5689999999999999999999999999999998642 11 112457999999999999999999999999998
Q ss_pred C---------hh--HHHHHHHhCC-CCeEEEEcccc
Q 029118 171 S---------EG--FISNAGSLKG-VQHVILLSQGA 194 (198)
Q Consensus 171 a---------~G--~lldAA~~~G-VkRiV~vSS~~ 194 (198)
+ .+ .++++|+++| |+|||+ |+.+
T Consensus 84 a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v~-S~~g 118 (313)
T 1qyd_A 84 LAGGVLSHHILEQLKLVEAIKEAGNIKRFLP-SEFG 118 (313)
T ss_dssp CCCSSSSTTTTTHHHHHHHHHHSCCCSEEEC-SCCS
T ss_pred CccccchhhHHHHHHHHHHHHhcCCCceEEe-cCCc
Confidence 2 12 2899999999 999997 6544
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.72 E-value=2.6e-17 Score=142.46 Aligned_cols=102 Identities=14% Similarity=0.120 Sum_probs=81.8
Q ss_pred cCCC-CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc-----cccc-------cCCceEEEEccCCCHHHHHHhhc
Q 029118 96 EEAR-DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AMES-------FGTYVESMAGDASNKKFLKTALR 162 (198)
Q Consensus 96 ~~~~-~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~-----a~~~-------~g~~vevV~GDl~D~~sL~~AL~ 162 (198)
..++ ++|||||||||||++++++|+++|++|++++|++.. .... .+.+++++.+|++|++++.++++
T Consensus 20 ~~~M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~ 99 (375)
T 1t2a_A 20 QGHMRNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIIN 99 (375)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHH
T ss_pred HhhcCcEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHH
Confidence 4444 689999999999999999999999999999998653 1111 13468999999999999999998
Q ss_pred C--ccEEEEcC--------------------hhH--HHHHHHhCCC---CeEEEEcccceec
Q 029118 163 G--VRSIICPS--------------------EGF--ISNAGSLKGV---QHVILLSQGAVVC 197 (198)
Q Consensus 163 G--vDaVIh~a--------------------~G~--lldAA~~~GV---kRiV~vSS~~Vy~ 197 (198)
+ +|+|||++ .++ ++++|++.++ +||||+||.++|.
T Consensus 100 ~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~ 161 (375)
T 1t2a_A 100 EVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYG 161 (375)
T ss_dssp HHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTC
T ss_pred hcCCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhC
Confidence 7 59999982 012 7899999998 8999999999885
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=2.6e-17 Score=143.44 Aligned_cols=101 Identities=22% Similarity=0.286 Sum_probs=85.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHC-CC-cEEEEEeCCccccc----ccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVK-RT-RIKALVKDKRNAME----SFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~-G~-~VralvR~~~~a~~----~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
..+++||||||||+||++++++|+++ |+ +|+++.|++.+... ....+++++.+|++|++.+.++++++|+|||+
T Consensus 19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih~ 98 (344)
T 2gn4_A 19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIHA 98 (344)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEEEC
Confidence 45689999999999999999999999 97 99999998754321 11357999999999999999999999999998
Q ss_pred C--------------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 171 S--------------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 171 a--------------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
+ .|+ ++++|.++|++||||+||..++.
T Consensus 99 Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~~ 147 (344)
T 2gn4_A 99 AALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAAN 147 (344)
T ss_dssp CCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSS
T ss_pred CCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccCC
Confidence 2 111 78999999999999999987653
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=2.1e-17 Score=140.03 Aligned_cols=94 Identities=13% Similarity=0.124 Sum_probs=79.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCc-cccc---ccCCceEEEEccCCCHHHHHHhhcCccEEEEcC----
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-NAME---SFGTYVESMAGDASNKKFLKTALRGVRSIICPS---- 171 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~-~a~~---~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a---- 171 (198)
++||||||||+||++|+++|+++|++|++++|++. +... ....+++++.+|++|++++.++++|+|+|||++
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~~~~ 91 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALAFPQ 91 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCGGG
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCchhh
Confidence 47999999999999999999999999999999875 2211 123569999999999999999999999999983
Q ss_pred -hh--HHHHHHHhCC-CCeEEEEcccc
Q 029118 172 -EG--FISNAGSLKG-VQHVILLSQGA 194 (198)
Q Consensus 172 -~G--~lldAA~~~G-VkRiV~vSS~~ 194 (198)
.+ .++++|+++| ++|||+ |+.+
T Consensus 92 ~~~~~~l~~aa~~~g~v~~~v~-S~~g 117 (318)
T 2r6j_A 92 ILDQFKILEAIKVAGNIKRFLP-SDFG 117 (318)
T ss_dssp STTHHHHHHHHHHHCCCCEEEC-SCCS
T ss_pred hHHHHHHHHHHHhcCCCCEEEe-eccc
Confidence 12 3899999998 999996 6544
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.5e-17 Score=139.32 Aligned_cols=95 Identities=22% Similarity=0.281 Sum_probs=79.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCC-------cccc---cccCCceEEEEccCCCHHHHHHhhcCccEEE
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-------RNAM---ESFGTYVESMAGDASNKKFLKTALRGVRSII 168 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~-------~~a~---~~~g~~vevV~GDl~D~~sL~~AL~GvDaVI 168 (198)
+++||||||||+||++++++|+++|++|++++|++ ++.. .....+++++.+|++|++++.++++++|+||
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi 81 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVI 81 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEEE
Confidence 56899999999999999999999999999999987 2221 1113569999999999999999999999999
Q ss_pred EcC-----hh--HHHHHHHhCC-CCeEEEEcccc
Q 029118 169 CPS-----EG--FISNAGSLKG-VQHVILLSQGA 194 (198)
Q Consensus 169 h~a-----~G--~lldAA~~~G-VkRiV~vSS~~ 194 (198)
|++ .+ .++++|+++| |+|||+ |+.+
T Consensus 82 ~~a~~~~~~~~~~l~~aa~~~g~v~~~v~-S~~g 114 (307)
T 2gas_A 82 CAAGRLLIEDQVKIIKAIKEAGNVKKFFP-SEFG 114 (307)
T ss_dssp ECSSSSCGGGHHHHHHHHHHHCCCSEEEC-SCCS
T ss_pred ECCcccccccHHHHHHHHHhcCCceEEee-cccc
Confidence 982 22 2899999998 999995 5544
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=5.4e-17 Score=138.88 Aligned_cols=98 Identities=13% Similarity=0.125 Sum_probs=81.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHC-CCcEEEEEeCCc--ccccc--c--CCceEEEEccCCCHHHHHHhhc--CccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKR--NAMES--F--GTYVESMAGDASNKKFLKTALR--GVRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~-G~~VralvR~~~--~a~~~--~--g~~vevV~GDl~D~~sL~~AL~--GvDaVIh~ 170 (198)
|+|||||||||||++++++|+++ |++|++++|++. ..... + +.+++++.+|++|++++.++++ ++|+|||+
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 80 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL 80 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhcCCCEEEEC
Confidence 47999999999999999999998 799999999752 11111 1 3468999999999999999998 99999998
Q ss_pred C--------------------hhH--HHHHHHhC--CCC-------eEEEEcccceec
Q 029118 171 S--------------------EGF--ISNAGSLK--GVQ-------HVILLSQGAVVC 197 (198)
Q Consensus 171 a--------------------~G~--lldAA~~~--GVk-------RiV~vSS~~Vy~ 197 (198)
+ .++ ++++|.+. +++ ||||+||.+||.
T Consensus 81 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g 138 (361)
T 1kew_A 81 AAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYG 138 (361)
T ss_dssp CSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGC
T ss_pred CCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhC
Confidence 2 112 78899888 998 999999998875
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=4.2e-17 Score=143.03 Aligned_cols=96 Identities=19% Similarity=0.230 Sum_probs=82.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc--cccc-CCceEEEEcc-CCCHHHHHHhhcCccEEEEcC--h
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA--MESF-GTYVESMAGD-ASNKKFLKTALRGVRSIICPS--E 172 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a--~~~~-g~~vevV~GD-l~D~~sL~~AL~GvDaVIh~a--~ 172 (198)
+++|||||||||||++++++|+++|++|++++|++++. .... ..+++++.+| ++|++++.++++++|+|||++ .
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~~~ 84 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTSQ 84 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCST
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEEcCCCC
Confidence 56899999999999999999999999999999988653 1111 2369999999 999999999999999999872 1
Q ss_pred -------h-HHHHHHHhCC-CCeEEEEcccc
Q 029118 173 -------G-FISNAGSLKG-VQHVILLSQGA 194 (198)
Q Consensus 173 -------G-~lldAA~~~G-VkRiV~vSS~~ 194 (198)
+ .++++|+++| ++||||+||.+
T Consensus 85 ~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~ 115 (352)
T 1xgk_A 85 AGDEIAIGKDLADAAKRAGTIQHYIYSSMPD 115 (352)
T ss_dssp TSCHHHHHHHHHHHHHHHSCCSEEEEEECCC
T ss_pred CcHHHHHHHHHHHHHHHcCCccEEEEeCCcc
Confidence 1 2889999999 99999999975
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.70 E-value=3.6e-17 Score=138.50 Aligned_cols=96 Identities=14% Similarity=0.161 Sum_probs=79.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCC-c-----cccc---ccCCceEEEEccCCCHHHHHHhhcCccEEE
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-R-----NAME---SFGTYVESMAGDASNKKFLKTALRGVRSII 168 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~-~-----~a~~---~~g~~vevV~GDl~D~~sL~~AL~GvDaVI 168 (198)
.+++||||||||+||++|+++|+++|++|++++|++ . +... ....+++++.+|++|++++.++++|+|+||
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi 82 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVI 82 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred cccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEE
Confidence 357899999999999999999999999999999987 2 1111 123569999999999999999999999999
Q ss_pred EcC-----hh--HHHHHHHhCC-CCeEEEEcccc
Q 029118 169 CPS-----EG--FISNAGSLKG-VQHVILLSQGA 194 (198)
Q Consensus 169 h~a-----~G--~lldAA~~~G-VkRiV~vSS~~ 194 (198)
|++ .+ .++++|+++| |+|||+ |+.+
T Consensus 83 ~~a~~~~~~~~~~l~~aa~~~g~v~~~v~-S~~g 115 (321)
T 3c1o_A 83 SALPFPMISSQIHIINAIKAAGNIKRFLP-SDFG 115 (321)
T ss_dssp ECCCGGGSGGGHHHHHHHHHHCCCCEEEC-SCCS
T ss_pred ECCCccchhhHHHHHHHHHHhCCccEEec-cccc
Confidence 983 22 3899999999 999994 5544
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=2.5e-17 Score=142.88 Aligned_cols=98 Identities=11% Similarity=0.110 Sum_probs=81.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc-----ccccc------CC-ceEEEEccCCCHHHHHHhhcC--cc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AMESF------GT-YVESMAGDASNKKFLKTALRG--VR 165 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~-----a~~~~------g~-~vevV~GDl~D~~sL~~AL~G--vD 165 (198)
++|||||||||||++++++|+++|++|++++|++.+ ..... +. +++++.+|++|++++.+++++ +|
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 108 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD 108 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCCC
Confidence 589999999999999999999999999999998754 11111 12 689999999999999999987 59
Q ss_pred EEEEcC--------------------hhH--HHHHHHhCCCC-----eEEEEcccceec
Q 029118 166 SIICPS--------------------EGF--ISNAGSLKGVQ-----HVILLSQGAVVC 197 (198)
Q Consensus 166 aVIh~a--------------------~G~--lldAA~~~GVk-----RiV~vSS~~Vy~ 197 (198)
+|||++ .++ ++++|++.+++ ||||+||.+||+
T Consensus 109 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg 167 (381)
T 1n7h_A 109 EVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFG 167 (381)
T ss_dssp EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGT
T ss_pred EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhC
Confidence 999982 012 78889888887 999999999885
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=3.3e-17 Score=140.99 Aligned_cols=95 Identities=14% Similarity=0.127 Sum_probs=79.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc----cc---cccCCceEEEEccCCCHHHHHHhhc--CccEEEE
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN----AM---ESFGTYVESMAGDASNKKFLKTALR--GVRSIIC 169 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~----a~---~~~g~~vevV~GDl~D~~sL~~AL~--GvDaVIh 169 (198)
+++|||||||||||++++++|+++|++|++++|++.. .. .....+++++.+|++|++++.++++ ++|+|||
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~ 89 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVS 89 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEEE
Confidence 4689999999999999999999999999999998722 11 1123579999999999999999999 9999999
Q ss_pred cC-----hhH--HHHHHHhCC-CCeEEEEcccc
Q 029118 170 PS-----EGF--ISNAGSLKG-VQHVILLSQGA 194 (198)
Q Consensus 170 ~a-----~G~--lldAA~~~G-VkRiV~vSS~~ 194 (198)
++ .++ ++++|+++| ++|||+ |+.+
T Consensus 90 ~a~~~n~~~~~~l~~aa~~~g~v~~~v~-S~~g 121 (346)
T 3i6i_A 90 TVGGESILDQIALVKAMKAVGTIKRFLP-SEFG 121 (346)
T ss_dssp CCCGGGGGGHHHHHHHHHHHCCCSEEEC-SCCS
T ss_pred CCchhhHHHHHHHHHHHHHcCCceEEee-cccC
Confidence 83 222 999999999 999997 6543
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.70 E-value=2.3e-17 Score=137.63 Aligned_cols=88 Identities=15% Similarity=0.140 Sum_probs=74.5
Q ss_pred cccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc--CccEEEEcC
Q 029118 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPS 171 (198)
Q Consensus 94 ~~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~--GvDaVIh~a 171 (198)
-+.++.++|||||||||||++++++|+++|++|++++|+ .+|++|++++.++++ ++|+|||++
T Consensus 7 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~---------------~~Dl~d~~~~~~~~~~~~~d~vih~A 71 (292)
T 1vl0_A 7 HHHHHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ---------------DLDITNVLAVNKFFNEKKPNVVINCA 71 (292)
T ss_dssp -----CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT---------------TCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred ccccccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc---------------cCCCCCHHHHHHHHHhcCCCEEEECC
Confidence 356778899999999999999999999999999999986 379999999999998 899999982
Q ss_pred --------------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 172 --------------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 --------------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.++ ++++|+++++ ||||+||.++|.
T Consensus 72 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS~~v~~ 118 (292)
T 1vl0_A 72 AHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFD 118 (292)
T ss_dssp CCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSC
T ss_pred ccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEechHHeEC
Confidence 012 7899998898 999999998885
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.69 E-value=6.7e-17 Score=138.83 Aligned_cols=99 Identities=15% Similarity=0.116 Sum_probs=79.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc-----ccc------cCCceEEEEccCCCHHHHHHhhcC--cc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-----MES------FGTYVESMAGDASNKKFLKTALRG--VR 165 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a-----~~~------~g~~vevV~GDl~D~~sL~~AL~G--vD 165 (198)
+++|||||||||||++++++|+++|++|++++|++... ... .+.+++++.+|++|++++.+++++ +|
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD 80 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCCC
Confidence 46899999999999999999999999999999976531 111 134689999999999999999987 69
Q ss_pred EEEEcC--------------------hhH--HHHHHHhCCC---CeEEEEcccceec
Q 029118 166 SIICPS--------------------EGF--ISNAGSLKGV---QHVILLSQGAVVC 197 (198)
Q Consensus 166 aVIh~a--------------------~G~--lldAA~~~GV---kRiV~vSS~~Vy~ 197 (198)
+|||++ .++ ++++|+++++ +||||+||.++|+
T Consensus 81 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g 137 (372)
T 1db3_A 81 EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYG 137 (372)
T ss_dssp EEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGT
T ss_pred EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhC
Confidence 999982 022 7899999999 8999999998885
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.69 E-value=2.1e-17 Score=131.53 Aligned_cols=93 Identities=11% Similarity=0.098 Sum_probs=81.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC--cEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC---h-
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS---E- 172 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~--~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a---~- 172 (198)
+++||||||||+||++++++|+++|+ +|++++|++.+ ..++++++.+|++|++++.+++ +|+|||++ .
T Consensus 5 ~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~----~~~~~~~~~~D~~~~~~~~~~~--~d~vi~~a~~~~~ 78 (215)
T 2a35_A 5 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----EHPRLDNPVGPLAELLPQLDGS--IDTAFCCLGTTIK 78 (215)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----CCTTEECCBSCHHHHGGGCCSC--CSEEEECCCCCHH
T ss_pred CceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc----cCCCceEEeccccCHHHHHHhh--hcEEEECeeeccc
Confidence 46899999999999999999999998 99999998865 2356899999999999999998 99999982 1
Q ss_pred --------------hH--HHHHHHhCCCCeEEEEcccceec
Q 029118 173 --------------GF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 173 --------------G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
++ ++++|++.+++||||+||.++|.
T Consensus 79 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~ 119 (215)
T 2a35_A 79 EAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADA 119 (215)
T ss_dssp HHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCT
T ss_pred cCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCC
Confidence 11 78899999999999999998874
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.69 E-value=3.4e-17 Score=137.99 Aligned_cols=90 Identities=12% Similarity=0.089 Sum_probs=63.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcC--ccEEEEcC-----
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG--VRSIICPS----- 171 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~G--vDaVIh~a----- 171 (198)
+++|||||||||||++++++|+++|++|++++|++.. ++ ++.+|++|++++.+++++ +|+|||++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~------~~--~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~ 73 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR------PK--FEQVNLLDSNAVHHIIHDFQPHVIVHCAAERRP 73 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC--------------------------CHHHHHHHCCSEEEECC-----
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC------CC--eEEecCCCHHHHHHHHHhhCCCEEEECCcccCh
Confidence 3689999999999999999999999999999987643 12 788999999999999986 89999982
Q ss_pred ---------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 172 ---------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 ---------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.++ ++++|.++++ ||||+||.++|.
T Consensus 74 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~~ 115 (315)
T 2ydy_A 74 DVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISSDYVFD 115 (315)
T ss_dssp --------------CHHHHHHHHHHHHHTC-EEEEEEEGGGSC
T ss_pred hhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchHHHcC
Confidence 112 7899988887 999999999885
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=2.9e-17 Score=137.17 Aligned_cols=85 Identities=22% Similarity=0.230 Sum_probs=74.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcC--ccEEEEcC------
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG--VRSIICPS------ 171 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~G--vDaVIh~a------ 171 (198)
|+|||||||||||++++++|+ +|++|++++|++. ++.+|++|++++.+++++ +|+|||++
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-----------~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~~ 68 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-----------EFCGDFSNPKGVAETVRKLRPDVIVNAAAHTAVD 68 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-----------SSCCCTTCHHHHHHHHHHHCCSEEEECCCCCCHH
T ss_pred CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-----------cccccCCCHHHHHHHHHhcCCCEEEECcccCCHh
Confidence 479999999999999999999 8999999998762 357899999999999987 99999982
Q ss_pred --------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 172 --------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 --------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.++ ++++|++.++ ||||+||.++|.
T Consensus 69 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~vy~ 109 (299)
T 1n2s_A 69 KAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFP 109 (299)
T ss_dssp HHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSC
T ss_pred hhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEecccEEe
Confidence 012 7899999998 899999999885
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.68 E-value=3.3e-17 Score=135.63 Aligned_cols=90 Identities=12% Similarity=0.092 Sum_probs=74.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcC--ccEEEEcC---
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG--VRSIICPS--- 171 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~G--vDaVIh~a--- 171 (198)
..+++|||||||||||++++++|+++|+ +.... ...++++.+|++|++.+.+++++ +|+|||++
T Consensus 4 ~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~~-----~~~~~~~~~D~~d~~~~~~~~~~~~~d~Vih~A~~~ 72 (319)
T 4b8w_A 4 FQSMRILVTGGSGLVGKAIQKVVADGAG------LPGED-----WVFVSSKDADLTDTAQTRALFEKVQPTHVIHLAAMV 72 (319)
T ss_dssp CCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTCE-----EEECCTTTCCTTSHHHHHHHHHHSCCSEEEECCCCC
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhcCC------ccccc-----ccccCceecccCCHHHHHHHHhhcCCCEEEECceec
Confidence 3578999999999999999999999998 22111 12356678999999999999988 99999982
Q ss_pred h------------------hH--HHHHHHhCCCCeEEEEcccceec
Q 029118 172 E------------------GF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 ~------------------G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
. ++ ++++|++.+++||||+||.++|+
T Consensus 73 ~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg 118 (319)
T 4b8w_A 73 GGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFP 118 (319)
T ss_dssp CCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSC
T ss_pred ccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcC
Confidence 0 11 78999999999999999999985
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=1.3e-16 Score=134.36 Aligned_cols=85 Identities=9% Similarity=0.111 Sum_probs=75.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc--CccEEEEcC---h-
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPS---E- 172 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~--GvDaVIh~a---~- 172 (198)
+++|||||||||||++++++|+++|++|+++.|+. .+|++|++++.++++ ++|+|||++ .
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~--------------~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~ 68 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD--------------ELNLLDSRAVHDFFASERIDQVYLAAAKVGG 68 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT--------------TCCTTCHHHHHHHHHHHCCSEEEECCCCCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc--------------cCCccCHHHHHHHHHhcCCCEEEEcCeecCC
Confidence 46899999999999999999999999999988753 279999999999999 999999982 1
Q ss_pred -----------------hH--HHHHHHhCCCCeEEEEcccceec
Q 029118 173 -----------------GF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 173 -----------------G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
++ ++++|++++++||||+||.++|.
T Consensus 69 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg 112 (321)
T 1e6u_A 69 IVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYP 112 (321)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSC
T ss_pred cchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcC
Confidence 11 78999999999999999999984
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.67 E-value=1.4e-16 Score=144.99 Aligned_cols=102 Identities=20% Similarity=0.278 Sum_probs=86.3
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHC---CCcEEEEEeCCcccc---------------------cccCCceEEEEccC
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVK---RTRIKALVKDKRNAM---------------------ESFGTYVESMAGDA 151 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~---G~~VralvR~~~~a~---------------------~~~g~~vevV~GDl 151 (198)
...+++|||||||||||++++++|+++ |++|++++|++.... .....+++++.+|+
T Consensus 70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl 149 (478)
T 4dqv_A 70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDK 149 (478)
T ss_dssp CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCT
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeEC
Confidence 345789999999999999999999999 999999999875421 01235799999999
Q ss_pred C------CHHHHHHhhcCccEEEEcC----------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 152 S------NKKFLKTALRGVRSIICPS----------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 152 ~------D~~sL~~AL~GvDaVIh~a----------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
+ |.+.+.++++++|+|||++ .++ ++++|++.+++||||+||.+||.
T Consensus 150 ~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~ 219 (478)
T 4dqv_A 150 SEPDLGLDQPMWRRLAETVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGA 219 (478)
T ss_dssp TSGGGGCCHHHHHHHHHHCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGT
T ss_pred CCcccCCCHHHHHHHHcCCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcC
Confidence 8 7779999999999999982 122 88999999999999999998875
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.66 E-value=7.4e-17 Score=134.69 Aligned_cols=94 Identities=19% Similarity=0.202 Sum_probs=78.0
Q ss_pred eEEEEcCCChHHHHHHHHHHHCC-CcEEEEEeCCcccc-cccCCceEEEEccCCCHHHHHHhhcC-----ccEEEEcC--
Q 029118 101 AVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAM-ESFGTYVESMAGDASNKKFLKTALRG-----VRSIICPS-- 171 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~G-~~VralvR~~~~a~-~~~g~~vevV~GDl~D~~sL~~AL~G-----vDaVIh~a-- 171 (198)
+|||||||||||++++++|+++| ++|+++.|++.... ... ..++ +.+|++|++.+.+++++ +|+|||++
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi~~a~~ 78 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNL-VDLN-IADYMDKEDFLIQIMAGEEFGDVEAIFHEGAC 78 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHH-HTSC-CSEEEEHHHHHHHHHTTCCCSSCCEEEECCSC
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhhhc-Ccce-eccccccHHHHHHHHhccccCCCcEEEECccc
Confidence 58999999999999999999999 99999999875431 111 1244 78999999999999986 99999982
Q ss_pred ----------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 172 ----------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 ----------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.++ ++++|+++++ ||||+||.++|+
T Consensus 79 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g 121 (310)
T 1eq2_A 79 SSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYG 121 (310)
T ss_dssp CCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGT
T ss_pred ccCcccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeHHHhC
Confidence 012 7899999999 999999999885
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.66 E-value=7.7e-17 Score=134.12 Aligned_cols=81 Identities=20% Similarity=0.232 Sum_probs=72.5
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc--CccEEEEcC-------
Q 029118 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPS------- 171 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~--GvDaVIh~a------- 171 (198)
+|||||||||||++++++|+++|++|++++| +.+|++|++.+.++++ ++|+|||++
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r---------------~~~D~~d~~~~~~~~~~~~~d~vi~~a~~~~~~~ 71 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEELNPEEYDIYPFDK---------------KLLDITNISQVQQVVQEIRPHIIIHCAAYTKVDQ 71 (287)
T ss_dssp EEEEESTTSHHHHHHHHHSCTTTEEEEEECT---------------TTSCTTCHHHHHHHHHHHCCSEEEECCCCCCHHH
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEecc---------------cccCCCCHHHHHHHHHhcCCCEEEECCcccChHH
Confidence 8999999999999999999999999999998 2379999999999998 799999982
Q ss_pred -------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 172 -------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 -------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.++ ++++|+++++ ||||+||.+||.
T Consensus 72 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS~~vy~ 111 (287)
T 3sc6_A 72 AEKERDLAYVINAIGARNVAVASQLVGA-KLVYISTDYVFQ 111 (287)
T ss_dssp HTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSC
T ss_pred HhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchhhhcC
Confidence 012 7899999998 799999999884
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.66 E-value=3.7e-16 Score=147.31 Aligned_cols=101 Identities=18% Similarity=0.151 Sum_probs=84.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc-------cccCCceEEEEccCCCHHHHHHhhc--CccEE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------ESFGTYVESMAGDASNKKFLKTALR--GVRSI 167 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~-------~~~g~~vevV~GDl~D~~sL~~AL~--GvDaV 167 (198)
..+++|||||||||||++++++|+++|++|++++|++.... ...+.+++++.+|++|++++.++++ ++|+|
T Consensus 9 ~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D~V 88 (699)
T 1z45_A 9 STSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSV 88 (699)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEE
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCCEE
Confidence 34678999999999999999999999999999999764321 1124568999999999999999998 89999
Q ss_pred EEcC----h----------------hH--HHHHHHhCCCCeEEEEcccceec
Q 029118 168 ICPS----E----------------GF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 168 Ih~a----~----------------G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
||++ . ++ ++++|++++++||||+||.++|.
T Consensus 89 ih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg 140 (699)
T 1z45_A 89 IHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYG 140 (699)
T ss_dssp EECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGC
T ss_pred EECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhC
Confidence 9982 0 11 78899999999999999999884
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=1.9e-16 Score=136.18 Aligned_cols=98 Identities=17% Similarity=0.158 Sum_probs=78.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCC-CcEEEEEeCCcccc-cccCCceEEEEccCCCHHHHHHhhc-----CccEEEE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAM-ESFGTYVESMAGDASNKKFLKTALR-----GVRSIIC 169 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G-~~VralvR~~~~a~-~~~g~~vevV~GDl~D~~sL~~AL~-----GvDaVIh 169 (198)
..+++|||||||||||++++++|+++| ++|+++.|++.... ..+ ..++ +.+|++|++.+.++++ ++|+|||
T Consensus 44 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~Vih 121 (357)
T 2x6t_A 44 IEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNL-VDLN-IADYMDKEDFLIQIMAGEEFGDVEAIFH 121 (357)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGGGGT-TTSC-CSEEEEHHHHHHHHHTTCCCSSCCEEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchhhcc-cCce-EeeecCcHHHHHHHHhhcccCCCCEEEE
Confidence 345789999999999999999999999 99999999875431 112 2344 7899999999999998 5999999
Q ss_pred cC------------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 170 PS------------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 170 ~a------------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
++ .++ ++++|+++++ ||||+||.++|.
T Consensus 122 ~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS~~v~g 168 (357)
T 2x6t_A 122 EGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYG 168 (357)
T ss_dssp CCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGC
T ss_pred CCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcchHHhC
Confidence 82 122 7899999999 999999999885
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=6.9e-16 Score=132.00 Aligned_cols=98 Identities=16% Similarity=0.165 Sum_probs=76.5
Q ss_pred cccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc----ccc-CCceEEEEccCCCHHHHHHhhcCccEEE
Q 029118 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM----ESF-GTYVESMAGDASNKKFLKTALRGVRSII 168 (198)
Q Consensus 94 ~~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~----~~~-g~~vevV~GDl~D~~sL~~AL~GvDaVI 168 (198)
+....+++|||||||||||++++++|+++|++|++++|++.... ... ..+++++.+|+.|+ ++.++|+||
T Consensus 22 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~d~vi 96 (343)
T 2b69_A 22 HMEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP-----LYIEVDQIY 96 (343)
T ss_dssp -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSC-----CCCCCSEEE
T ss_pred ccccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCCh-----hhcCCCEEE
Confidence 34556789999999999999999999999999999999754321 111 35689999999886 478999999
Q ss_pred EcC----h----------------hH--HHHHHHhCCCCeEEEEcccceec
Q 029118 169 CPS----E----------------GF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 169 h~a----~----------------G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
|++ . ++ ++++|++.++ ||||+||.++|.
T Consensus 97 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g 146 (343)
T 2b69_A 97 HLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYG 146 (343)
T ss_dssp ECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGB
T ss_pred ECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-cEEEECcHHHhC
Confidence 982 0 11 7889988887 999999999884
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=99.65 E-value=1.3e-16 Score=133.50 Aligned_cols=90 Identities=20% Similarity=0.177 Sum_probs=72.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc---cccc-----cCCceEEEEccCCCHHHHHHhhcCccEEEE
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN---AMES-----FGTYVESMAGDASNKKFLKTALRGVRSIIC 169 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~---a~~~-----~g~~vevV~GDl~D~~sL~~AL~GvDaVIh 169 (198)
.+++|||||||||||++++++|+++|++|++++|++.. .... ...+++++.+|++ ++|+|||
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~----------~~d~vi~ 75 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS----------DVRLVYH 75 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT----------TEEEEEE
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc----------cCCEEEE
Confidence 46799999999999999999999999999999997751 1111 1245677777765 8999999
Q ss_pred cC-------------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 170 PS-------------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 170 ~a-------------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
++ .++ ++++|+++|++||||+||.+||.
T Consensus 76 ~a~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~ 124 (321)
T 3vps_A 76 LASHKSVPRSFKQPLDYLDNVDSGRHLLALCTSVGVPKVVVGSTCEVYG 124 (321)
T ss_dssp CCCCCCHHHHTTSTTTTHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGC
T ss_pred CCccCChHHHHhCHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCHHHhC
Confidence 82 011 88999999999999999999885
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.64 E-value=4.3e-16 Score=131.11 Aligned_cols=85 Identities=15% Similarity=0.125 Sum_probs=66.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC--------
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-------- 171 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a-------- 171 (198)
|+|||||||||||++|+++|+++||+|++++|++.+.. +..| +...++++++|+|||++
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~~---------~~~~----~~~~~~l~~~d~vihla~~~i~~~~ 67 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPGR---------ITWD----ELAASGLPSCDAAVNLAGENILNPL 67 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTE---------EEHH----HHHHHCCCSCSEEEECCCCCSSCTT
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcCe---------eecc----hhhHhhccCCCEEEEeccCcccchh
Confidence 68999999999999999999999999999999875421 2222 34467889999999972
Q ss_pred ----------------hhH--HHHHHHhCCCCe--EEEEcccceec
Q 029118 172 ----------------EGF--ISNAGSLKGVQH--VILLSQGAVVC 197 (198)
Q Consensus 172 ----------------~G~--lldAA~~~GVkR--iV~vSS~~Vy~ 197 (198)
.++ +++++++.++++ +|+.||.++|+
T Consensus 68 ~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg 113 (298)
T 4b4o_A 68 RRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQ 113 (298)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSC
T ss_pred hhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeec
Confidence 011 677787776654 88889999986
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.64 E-value=8.7e-16 Score=144.57 Aligned_cols=100 Identities=15% Similarity=0.078 Sum_probs=83.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHC-CCcEEEEEeCCcccccc-cCCceEEEEccCCCHHH-HHHhhcCccEEEEcC--
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMES-FGTYVESMAGDASNKKF-LKTALRGVRSIICPS-- 171 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~-G~~VralvR~~~~a~~~-~g~~vevV~GDl~D~~s-L~~AL~GvDaVIh~a-- 171 (198)
..+++|||||||||||++++++|+++ |++|++++|++.+.... ...+++++.+|++|+++ +.++++++|+|||++
T Consensus 313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~D~Vih~Aa~ 392 (660)
T 1z7e_A 313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAI 392 (660)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGTTCTTEEEEECCTTTCHHHHHHHHHHCSEEEECCCC
T ss_pred ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhccCCceEEEECCCCCcHHHHHHhhcCCCEEEECcee
Confidence 35678999999999999999999998 89999999987654332 23579999999999765 888999999999972
Q ss_pred ------------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 172 ------------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 ------------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.++ ++++|++++ +||||+||.++|+
T Consensus 393 ~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~r~V~~SS~~vyg 437 (660)
T 1z7e_A 393 ATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYG 437 (660)
T ss_dssp CCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGB
T ss_pred cCccccccCHHHHHHhhhHHHHHHHHHHHHhC-CEEEEEecHHHcC
Confidence 122 789999999 9999999999884
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.64 E-value=1e-15 Score=125.90 Aligned_cols=88 Identities=16% Similarity=0.115 Sum_probs=75.2
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcC--ccEEEEcC----h-
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG--VRSIICPS----E- 172 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~G--vDaVIh~a----~- 172 (198)
|+|||||||||||++++++|+ +|++|++++|++... .+ +.+|++|++++.+++++ +|+|||++ .
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~~-----~~---~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~ 71 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEIQ-----GG---YKLDLTDFPRLEDFIIKKRPDVIINAAAMTDVD 71 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCCT-----TC---EECCTTSHHHHHHHHHHHCCSEEEECCCCCCHH
T ss_pred CEEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcCC-----CC---ceeccCCHHHHHHHHHhcCCCEEEECCcccChh
Confidence 479999999999999999999 589999999987432 22 88999999999999987 99999982 0
Q ss_pred ---------------hH--HHHHHHhCCCCeEEEEcccceec
Q 029118 173 ---------------GF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 173 ---------------G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
++ ++++|++.++ ||||+||.++|.
T Consensus 72 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~iv~~SS~~~~~ 112 (273)
T 2ggs_A 72 KCEIEKEKAYKINAEAVRHIVRAGKVIDS-YIVHISTDYVFD 112 (273)
T ss_dssp HHHHCHHHHHHHHTHHHHHHHHHHHHTTC-EEEEEEEGGGSC
T ss_pred hhhhCHHHHHHHhHHHHHHHHHHHHHhCC-eEEEEecceeEc
Confidence 11 7888988887 999999998874
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.63 E-value=2.5e-16 Score=139.58 Aligned_cols=98 Identities=17% Similarity=0.208 Sum_probs=79.6
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc------------------ccccCCceEEEEccCCCHHHH
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA------------------MESFGTYVESMAGDASNKKFL 157 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a------------------~~~~g~~vevV~GDl~D~~sL 157 (198)
..++++|||||||||||++++++|+++|++|++++|++... ....+.+++++.+|++|++.+
T Consensus 66 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l 145 (427)
T 4f6c_A 66 HRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV 145 (427)
T ss_dssp CCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCC
T ss_pred CCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccC
Confidence 44567899999999999999999999999999999998721 011236799999999999998
Q ss_pred HHhhcCccEEEEcC-----------------hhH--HHHHHHhCCCCeEEEEcccce
Q 029118 158 KTALRGVRSIICPS-----------------EGF--ISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 158 ~~AL~GvDaVIh~a-----------------~G~--lldAA~~~GVkRiV~vSS~~V 195 (198)
. ++.++|+|||++ .++ ++++|.+ +++||||+||.++
T Consensus 146 ~-~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~-~~~~~v~~SS~~~ 200 (427)
T 4f6c_A 146 V-LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISV 200 (427)
T ss_dssp C-CSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHH-TTCEEEEEEEGGG
T ss_pred C-CcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHh-cCCcEEEECchHh
Confidence 8 889999999982 122 7888888 8999999999887
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.62 E-value=3.1e-16 Score=142.68 Aligned_cols=96 Identities=18% Similarity=0.209 Sum_probs=81.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc------------------ccccCCceEEEEccCCCHHHHHH
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA------------------MESFGTYVESMAGDASNKKFLKT 159 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a------------------~~~~g~~vevV~GDl~D~~sL~~ 159 (198)
++++|||||||||||++|+++|+++|++|++++|++.+. ......+++++.+|++|++.+.
T Consensus 149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~- 227 (508)
T 4f6l_B 149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV- 227 (508)
T ss_dssp CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-
T ss_pred CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-
Confidence 457899999999999999999999999999999988731 1123467999999999988888
Q ss_pred hhcCccEEEEcC-----------------hhH--HHHHHHhCCCCeEEEEcccce
Q 029118 160 ALRGVRSIICPS-----------------EGF--ISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 160 AL~GvDaVIh~a-----------------~G~--lldAA~~~GVkRiV~vSS~~V 195 (198)
++.++|+|||++ .++ ++++|++ +++||||+||.+|
T Consensus 228 ~~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~-~~~~~v~iSS~~v 281 (508)
T 4f6l_B 228 LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISV 281 (508)
T ss_dssp CSSCCSEEEECCCC--------CCHHHHHHHHHHHHHHHHT-TTCEEEEEEESCT
T ss_pred CccCCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHh-CCCcEEEeCChhh
Confidence 889999999982 122 7888888 8899999999887
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.59 E-value=2.8e-15 Score=137.51 Aligned_cols=89 Identities=13% Similarity=0.081 Sum_probs=75.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC-------
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS------- 171 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a------- 171 (198)
+|+|||||||||||++|+++|+++|++|++++|++.+. +.+.+|+.| .+.++++++|+|||++
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~--------~~v~~d~~~--~~~~~l~~~D~Vih~A~~~~~~~ 216 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP--------GKRFWDPLN--PASDLLDGADVLVHLAGEPIFGR 216 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT--------TCEECCTTS--CCTTTTTTCSEEEECCCC-----
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc--------cceeecccc--hhHHhcCCCCEEEECCCCccccc
Confidence 67999999999999999999999999999999987653 226778875 3578899999999972
Q ss_pred --------------hhH--HHHH-HHhCCCCeEEEEcccceec
Q 029118 172 --------------EGF--ISNA-GSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 --------------~G~--lldA-A~~~GVkRiV~vSS~~Vy~ 197 (198)
.++ ++++ |++.+++||||+||.+||+
T Consensus 217 ~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg 259 (516)
T 3oh8_A 217 FNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYG 259 (516)
T ss_dssp CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGC
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEec
Confidence 012 6788 6788999999999999986
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.57 E-value=3.4e-15 Score=129.43 Aligned_cols=79 Identities=13% Similarity=0.124 Sum_probs=68.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC-------
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS------- 171 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a------- 171 (198)
|+|||||||||||++|+++|+++|+ +|+++.|+ .|++++.++++++|+|||++
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~-------------------~d~~~l~~~~~~~d~Vih~a~~~~~~~ 61 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ-------------------TKEEELESALLKADFIVHLAGVNRPEH 61 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT-------------------CCHHHHHHHHHHCSEEEECCCSBCTTC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC-------------------CCHHHHHHHhccCCEEEECCcCCCCCC
Confidence 5899999999999999999999998 66555443 89999999999999999982
Q ss_pred ---------hhH--HHHHHHhCCCC-eEEEEcccceec
Q 029118 172 ---------EGF--ISNAGSLKGVQ-HVILLSQGAVVC 197 (198)
Q Consensus 172 ---------~G~--lldAA~~~GVk-RiV~vSS~~Vy~ 197 (198)
.++ ++++|+++|++ ||||+||.++|.
T Consensus 62 ~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~ 99 (369)
T 3st7_A 62 DKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ 99 (369)
T ss_dssp STTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC
Confidence 122 89999999998 999999999874
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=1.3e-14 Score=118.64 Aligned_cols=101 Identities=12% Similarity=0.146 Sum_probs=81.1
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
..++++|||||+|+||++++++|+++|++|+++.|++++... ..+..+.++.+|++|+++++++++ +
T Consensus 9 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 88 (255)
T 1fmc_A 9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGK 88 (255)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 456899999999999999999999999999999998754321 124568899999999999999886 8
Q ss_pred ccEEEEcC----h-------------------hH--HHHHH----HhCCCCeEEEEcccceec
Q 029118 164 VRSIICPS----E-------------------GF--ISNAG----SLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 164 vDaVIh~a----~-------------------G~--lldAA----~~~GVkRiV~vSS~~Vy~ 197 (198)
+|.|||++ . ++ +++++ ++.+.++||++||..++.
T Consensus 89 ~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~ 151 (255)
T 1fmc_A 89 VDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN 151 (255)
T ss_dssp CCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC
T ss_pred CCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcC
Confidence 99999972 0 11 33443 466889999999987653
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.56 E-value=6.4e-15 Score=119.68 Aligned_cols=92 Identities=11% Similarity=0.158 Sum_probs=74.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc----CccEEEEcC---
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR----GVRSIICPS--- 171 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~----GvDaVIh~a--- 171 (198)
+++||||||||+||++++++|+++|++|++++|++++... .+.+|++|+++++++++ ++|+|||++
T Consensus 1 Mk~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag~~ 73 (255)
T 2dkn_A 1 MSVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA-------DLSTPGGRETAVAAVLDRCGGVLDGLVCCAGVG 73 (255)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------CTTSHHHHHHHHHHHHHHHTTCCSEEEECCCCC
T ss_pred CcEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc-------cccCCcccHHHHHHHHHHcCCCccEEEECCCCC
Confidence 3589999999999999999999999999999998765422 16789999999999987 899999982
Q ss_pred h--------------hH--HHHHH----HhCCCCeEEEEcccceec
Q 029118 172 E--------------GF--ISNAG----SLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 ~--------------G~--lldAA----~~~GVkRiV~vSS~~Vy~ 197 (198)
. ++ +++++ ++.+.+|||++||..+|.
T Consensus 74 ~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~ 119 (255)
T 2dkn_A 74 VTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQ 119 (255)
T ss_dssp TTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGS
T ss_pred CcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEecccccc
Confidence 1 11 44544 445789999999988774
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=7.5e-15 Score=119.67 Aligned_cols=99 Identities=12% Similarity=0.122 Sum_probs=79.6
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-------cCCceEEEEccCCCHHHHHHhhc-------
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR------- 162 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-------~g~~vevV~GDl~D~~sL~~AL~------- 162 (198)
..++++|||||+|+||++++++|+++|++|+++.|++++.... .+..++++.+|++|+++++++++
T Consensus 5 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 84 (248)
T 2pnf_A 5 LQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVD 84 (248)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSS
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 4567899999999999999999999999999999987543211 25568999999999999999986
Q ss_pred CccEEEEcC------------------------hhH------HHHHHHhCCCCeEEEEcccce
Q 029118 163 GVRSIICPS------------------------EGF------ISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 163 GvDaVIh~a------------------------~G~------lldAA~~~GVkRiV~vSS~~V 195 (198)
++|.|||++ .++ +++.+++++.+|||++||...
T Consensus 85 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~ 147 (248)
T 2pnf_A 85 GIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVG 147 (248)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHH
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHh
Confidence 899999972 011 234455678999999999754
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.56 E-value=2.3e-14 Score=120.11 Aligned_cols=99 Identities=12% Similarity=0.137 Sum_probs=82.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc---ccCCceEEEEccCCCHHHHHHhhc-------CccEE
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~---~~g~~vevV~GDl~D~~sL~~AL~-------GvDaV 167 (198)
.++++|||||+|+||++++++|+++|++|+++.|+.++... ..+..++++.+|++|+++++++++ ++|.|
T Consensus 4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~l 83 (281)
T 3m1a_A 4 SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVL 83 (281)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence 46789999999999999999999999999999998765432 235679999999999999999886 78999
Q ss_pred EEcC------------------------hhH------HHHHHHhCCCCeEEEEccccee
Q 029118 168 ICPS------------------------EGF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 168 Ih~a------------------------~G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
||++ .|+ +++.+++++..|||++||...+
T Consensus 84 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~ 142 (281)
T 3m1a_A 84 VNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQ 142 (281)
T ss_dssp EECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred EECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCcccc
Confidence 9972 011 4555677889999999998664
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=3.2e-14 Score=118.46 Aligned_cols=101 Identities=15% Similarity=0.175 Sum_probs=80.6
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc---c----CCceEEEEccCCCHHHHHHhhc-------
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F----GTYVESMAGDASNKKFLKTALR------- 162 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~---~----g~~vevV~GDl~D~~sL~~AL~------- 162 (198)
..++++|||||+|+||++++++|+++|++|+++.|++++.... + +..+.++.+|++|++++.++++
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 84 (263)
T 3ai3_A 5 ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFG 84 (263)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 3567899999999999999999999999999999987543221 1 5568999999999999998886
Q ss_pred CccEEEEcC-------------h-----------hH------HHHHHHhCCCCeEEEEcccceec
Q 029118 163 GVRSIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 163 GvDaVIh~a-------------~-----------G~------lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
++|.|||++ . ++ ++..+++++..|||++||..++.
T Consensus 85 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~ 149 (263)
T 3ai3_A 85 GADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQ 149 (263)
T ss_dssp SCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcC
Confidence 899999972 0 11 23334567889999999987753
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.54 E-value=1.7e-14 Score=117.36 Aligned_cols=99 Identities=17% Similarity=0.166 Sum_probs=79.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccccc--CCceEEEEccCCCHHHHHHhhc-------CccEEEE
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~--g~~vevV~GDl~D~~sL~~AL~-------GvDaVIh 169 (198)
+++||||||+|+||++++++|+++|++|.++.|++++..... -.+++++.+|++|++++.++++ ++|.|||
T Consensus 5 ~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~ 84 (234)
T 2ehd_A 5 KGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALVN 84 (234)
T ss_dssp CCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 468999999999999999999999999999999875432211 1258899999999999988875 7899999
Q ss_pred cC------------------------hh------HHHHHHHhCCCCeEEEEcccceec
Q 029118 170 PS------------------------EG------FISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 170 ~a------------------------~G------~lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
++ .+ .+++.+++.+..|||++||.+++.
T Consensus 85 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~ 142 (234)
T 2ehd_A 85 NAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKN 142 (234)
T ss_dssp CCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTS
T ss_pred CCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcC
Confidence 72 01 144556778899999999987653
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.54 E-value=3.9e-14 Score=117.97 Aligned_cols=101 Identities=17% Similarity=0.263 Sum_probs=80.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc---c-----CCceEEEEccCCCHHHHHHhhc------
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F-----GTYVESMAGDASNKKFLKTALR------ 162 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~---~-----g~~vevV~GDl~D~~sL~~AL~------ 162 (198)
..++++|||||+|+||++++++|+++|++|+++.|++++.... . +..++++.+|++|+++++++++
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (260)
T 2z1n_A 5 IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLG 84 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhc
Confidence 3467899999999999999999999999999999987543221 1 2368999999999999999987
Q ss_pred CccEEEEcC-------------h-----------hH------HHHHHHhCCCCeEEEEcccceec
Q 029118 163 GVRSIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 163 GvDaVIh~a-------------~-----------G~------lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
|+|.|||++ + +. +++.+++++..|||++||..++.
T Consensus 85 gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~ 149 (260)
T 2z1n_A 85 GADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLR 149 (260)
T ss_dssp CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcC
Confidence 799999972 0 11 34455677899999999987653
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.53 E-value=3.9e-14 Score=115.43 Aligned_cols=101 Identities=16% Similarity=0.150 Sum_probs=78.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccccc--CCceEEEEccCCCHHHHHHhhc---CccEEEEcC
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTALR---GVRSIICPS 171 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~--g~~vevV~GDl~D~~sL~~AL~---GvDaVIh~a 171 (198)
..++++|||||+|+||++++++|+++|++|.++.|++++..... ..+++++.+|++|+++++++++ .+|+|||++
T Consensus 5 ~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~A 84 (244)
T 1cyd_A 5 FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNA 84 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECC
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEECC
Confidence 45679999999999999999999999999999999875532211 1357889999999999999987 479999972
Q ss_pred -------------h-----------hH--HHHHH----HhCC-CCeEEEEcccceec
Q 029118 172 -------------E-----------GF--ISNAG----SLKG-VQHVILLSQGAVVC 197 (198)
Q Consensus 172 -------------~-----------G~--lldAA----~~~G-VkRiV~vSS~~Vy~ 197 (198)
+ ++ +++++ ++.+ ..|||++||..+|.
T Consensus 85 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~ 141 (244)
T 1cyd_A 85 ALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHV 141 (244)
T ss_dssp CCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS
T ss_pred cccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcC
Confidence 0 11 23443 3446 78999999987763
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.52 E-value=2.7e-14 Score=116.83 Aligned_cols=100 Identities=13% Similarity=0.183 Sum_probs=79.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc---cC--CceEEEEccCCCHHHHHHhhc-------Cc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG--TYVESMAGDASNKKFLKTALR-------GV 164 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~---~g--~~vevV~GDl~D~~sL~~AL~-------Gv 164 (198)
..++++|||||+|+||++++++|+++|++|+++.|+++..... .. ..++++.+|++|++++.++++ .+
T Consensus 4 ~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (251)
T 1zk4_A 4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPV 83 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4567899999999999999999999999999999987543211 11 468999999999999998886 48
Q ss_pred cEEEEcC------------------------hhH------HHHHHHhCCC-CeEEEEccccee
Q 029118 165 RSIICPS------------------------EGF------ISNAGSLKGV-QHVILLSQGAVV 196 (198)
Q Consensus 165 DaVIh~a------------------------~G~------lldAA~~~GV-kRiV~vSS~~Vy 196 (198)
|.|||++ .++ +++.+++.+. .|||++||..++
T Consensus 84 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~ 146 (251)
T 1zk4_A 84 STLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGF 146 (251)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGT
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhc
Confidence 9999972 011 3455667788 899999998765
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.52 E-value=5.4e-14 Score=114.98 Aligned_cols=98 Identities=16% Similarity=0.263 Sum_probs=78.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc-------ccCCceEEEEccCCCHHHHHHhhc-------Cc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------SFGTYVESMAGDASNKKFLKTALR-------GV 164 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~-------~~g~~vevV~GDl~D~~sL~~AL~-------Gv 164 (198)
++++|||||+|+||++++++|+++|++|.++.|++++... ..+..++++.+|++|+++++++++ ++
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI 81 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 4689999999999999999999999999999998754321 124568999999999999999886 89
Q ss_pred cEEEEcC------h---------------------hH------HHHHHHhCCCCeEEEEccccee
Q 029118 165 RSIICPS------E---------------------GF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 165 DaVIh~a------~---------------------G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
|.|||++ . ++ +++.+++.+.+|||++||...+
T Consensus 82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~ 146 (250)
T 2cfc_A 82 DVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASL 146 (250)
T ss_dssp CEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred CEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhc
Confidence 9999972 0 00 2344556689999999998664
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=6.1e-14 Score=114.90 Aligned_cols=100 Identities=15% Similarity=0.223 Sum_probs=79.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc---ccCCce-EEEEccCCCHHHHHHhh------cCccE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYV-ESMAGDASNKKFLKTAL------RGVRS 166 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~---~~g~~v-evV~GDl~D~~sL~~AL------~GvDa 166 (198)
..++++|||||+|+||++++++|+++|++|+++.|++++... ..+..+ +++.+|++|++++++++ .++|.
T Consensus 9 ~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~ 88 (254)
T 2wsb_A 9 LDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSI 88 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcE
Confidence 456789999999999999999999999999999998764322 123456 88999999999999887 47899
Q ss_pred EEEcC------------------------hhH------HHHHHHhCCCCeEEEEccccee
Q 029118 167 IICPS------------------------EGF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 167 VIh~a------------------------~G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
|||++ .++ +++.+++++..|||++||..++
T Consensus 89 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~ 148 (254)
T 2wsb_A 89 LVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGT 148 (254)
T ss_dssp EEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred EEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhc
Confidence 99972 011 3344566789999999998765
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.52 E-value=6.9e-14 Score=117.32 Aligned_cols=101 Identities=18% Similarity=0.148 Sum_probs=81.5
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc--------cCCceEEEEccCCCHHHHHHhhc-----
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--------FGTYVESMAGDASNKKFLKTALR----- 162 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~--------~g~~vevV~GDl~D~~sL~~AL~----- 162 (198)
...++++|||||+|+||++++++|+++|++|.+++|++.+.... .+..++++.+|++|++++.++++
T Consensus 29 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 108 (279)
T 1xg5_A 29 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ 108 (279)
T ss_dssp GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence 35567999999999999999999999999999999987543221 12457899999999999998886
Q ss_pred --CccEEEEcC------------------------hh----H--HHHHHHhCCC--CeEEEEccccee
Q 029118 163 --GVRSIICPS------------------------EG----F--ISNAGSLKGV--QHVILLSQGAVV 196 (198)
Q Consensus 163 --GvDaVIh~a------------------------~G----~--lldAA~~~GV--kRiV~vSS~~Vy 196 (198)
++|.|||++ .+ + +++++++.++ .+||++||..++
T Consensus 109 ~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~ 176 (279)
T 1xg5_A 109 HSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGH 176 (279)
T ss_dssp HCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGT
T ss_pred CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhc
Confidence 899999972 01 1 4566777887 899999998765
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=99.51 E-value=1.6e-13 Score=115.44 Aligned_cols=95 Identities=12% Similarity=0.161 Sum_probs=78.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc-------CccEEEE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~-------GvDaVIh 169 (198)
..++++|||||+|+||++++++|+++|++|.++.|++++ +..++++.+|++|+++++++++ ++|.|||
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~ 80 (264)
T 2dtx_A 6 LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-----EAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVN 80 (264)
T ss_dssp GTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-----SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-----CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 456899999999999999999999999999999998764 3468899999999999998886 7999999
Q ss_pred cC------------------------hhH------HHHHHHhCCCCeEEEEccccee
Q 029118 170 PS------------------------EGF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 170 ~a------------------------~G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
++ .++ ++..+++.+..|||++||.+++
T Consensus 81 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~ 137 (264)
T 2dtx_A 81 NAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQAS 137 (264)
T ss_dssp CCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGT
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhc
Confidence 72 011 2333445688999999998765
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.51 E-value=9.6e-14 Score=116.53 Aligned_cols=101 Identities=16% Similarity=0.240 Sum_probs=80.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
..++++|||||+|+||++++++|+++|++|+++.|+++..... .+..++++.+|++|++++.++++ +
T Consensus 29 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 108 (272)
T 1yb1_A 29 VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGD 108 (272)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence 4567899999999999999999999999999999987543221 24568999999999999988875 7
Q ss_pred ccEEEEcC-------------h-----------hH------HHHHHHhCCCCeEEEEcccceec
Q 029118 164 VRSIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 164 vDaVIh~a-------------~-----------G~------lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
+|.|||++ . ++ +++.+++.+..+||++||..++.
T Consensus 109 iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~ 172 (272)
T 1yb1_A 109 VSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHV 172 (272)
T ss_dssp CSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CC
T ss_pred CcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcC
Confidence 89999972 0 11 33445567899999999987653
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.51 E-value=7.7e-14 Score=113.85 Aligned_cols=97 Identities=13% Similarity=0.133 Sum_probs=75.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEE-EeCCccccc------ccCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~Vral-vR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
.++++|||||+|+||++++++|+++|++|+++ .|++..... ..+..++++.+|++|+++++++++ +
T Consensus 4 ~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (247)
T 2hq1_A 4 KGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGR 83 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 46789999999999999999999999999999 566543321 124568999999999999998886 8
Q ss_pred ccEEEEcC------------------------hhH------HHHHHHhCCCCeEEEEcccc
Q 029118 164 VRSIICPS------------------------EGF------ISNAGSLKGVQHVILLSQGA 194 (198)
Q Consensus 164 vDaVIh~a------------------------~G~------lldAA~~~GVkRiV~vSS~~ 194 (198)
+|.|||++ .++ +++.+++.+..|||++||..
T Consensus 84 ~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~ 144 (247)
T 2hq1_A 84 IDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIA 144 (247)
T ss_dssp CCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC--
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChh
Confidence 99999972 011 23334456889999999974
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=6.5e-14 Score=117.29 Aligned_cols=100 Identities=12% Similarity=0.150 Sum_probs=80.8
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc---ccCCceEEEEccCCCHHHHHHhhc-------CccE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~---~~g~~vevV~GDl~D~~sL~~AL~-------GvDa 166 (198)
..++++|||||+|+||++++++|+++|++|+++.|++++... .....++++.+|++|+++++++++ ++|.
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~ 84 (260)
T 1nff_A 5 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV 84 (260)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 356789999999999999999999999999999998755322 223358899999999999999987 8999
Q ss_pred EEEcC------------------------hhH------HHHHHHhCCCCeEEEEccccee
Q 029118 167 IICPS------------------------EGF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 167 VIh~a------------------------~G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
|||++ .++ +++.+++++..|||++||...+
T Consensus 85 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 144 (260)
T 1nff_A 85 LVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGL 144 (260)
T ss_dssp EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhc
Confidence 99972 011 3455566788999999998765
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=99.51 E-value=9.8e-14 Score=115.22 Aligned_cols=99 Identities=15% Similarity=0.113 Sum_probs=80.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc-cc---ccCCceEEEEccCCCHHHHHHhhc-------CccE
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-ME---SFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a-~~---~~g~~vevV~GDl~D~~sL~~AL~-------GvDa 166 (198)
.++++|||||+|+||++++++|+++|++|+++.|+++.. .. ..+..+.++.+|++|++++.++++ ++|.
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 82 (255)
T 2q2v_A 3 KGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVDI 82 (255)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCSE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 467899999999999999999999999999999987521 11 124568899999999999999987 8999
Q ss_pred EEEcC-------------h-----------hH------HHHHHHhCCCCeEEEEccccee
Q 029118 167 IICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 167 VIh~a-------------~-----------G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
|||++ . ++ ++..+++++..|||++||...+
T Consensus 83 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 142 (255)
T 2q2v_A 83 LVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGL 142 (255)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGT
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhc
Confidence 99972 0 11 3455677889999999998765
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=99.51 E-value=3.2e-14 Score=103.34 Aligned_cols=97 Identities=22% Similarity=0.174 Sum_probs=82.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCC-CcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC----h
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS----E 172 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G-~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a----~ 172 (198)
.+++|+|+|+ |++|+++++.|.++| ++|+++.|++++.......+++++.+|+.|++.+.++++++|.||++. .
T Consensus 4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~~~ 82 (118)
T 3ic5_A 4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAPFFLT 82 (118)
T ss_dssp TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSCGGGH
T ss_pred CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCCchhh
Confidence 4578999999 999999999999999 999999999876654445568999999999999999999999999983 2
Q ss_pred hHHHHHHHhCCCCeEEEEcccce
Q 029118 173 GFISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 173 G~lldAA~~~GVkRiV~vSS~~V 195 (198)
..++++|.++|+++|.+.++...
T Consensus 83 ~~~~~~~~~~g~~~~~~~~~~~~ 105 (118)
T 3ic5_A 83 PIIAKAAKAAGAHYFDLTEDVAA 105 (118)
T ss_dssp HHHHHHHHHTTCEEECCCSCHHH
T ss_pred HHHHHHHHHhCCCEEEecCcHHH
Confidence 23889999999998887666543
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.51 E-value=8.3e-14 Score=115.34 Aligned_cols=100 Identities=21% Similarity=0.201 Sum_probs=76.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cCCceEEEEccCCCHHHHHHhh--------c
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTAL--------R 162 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~AL--------~ 162 (198)
..+++||||||+|+||++++++|+++|++|+++.|++++.... .+..++++.+|++|++++++++ .
T Consensus 12 l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 91 (266)
T 1xq1_A 12 LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGG 91 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 4567899999999999999999999999999999987543221 2456899999999999999887 5
Q ss_pred CccEEEEcC----h--------------------hH--HHHHH----HhCCCCeEEEEccccee
Q 029118 163 GVRSIICPS----E--------------------GF--ISNAG----SLKGVQHVILLSQGAVV 196 (198)
Q Consensus 163 GvDaVIh~a----~--------------------G~--lldAA----~~~GVkRiV~vSS~~Vy 196 (198)
++|.|||++ . ++ +++++ ++.+..|||++||..++
T Consensus 92 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~ 155 (266)
T 1xq1_A 92 KLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGV 155 (266)
T ss_dssp CCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC-----
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhc
Confidence 789999972 0 11 34444 56789999999998765
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.50 E-value=1.1e-13 Score=116.85 Aligned_cols=100 Identities=15% Similarity=0.127 Sum_probs=82.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc-------CccEEEE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~-------GvDaVIh 169 (198)
..++++|||||+|+||++++++|+++|++|.++.|+.++........+.++.+|++|++++.++++ ++|.|||
T Consensus 14 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvn 93 (266)
T 3p19_A 14 SMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVN 93 (266)
T ss_dssp -CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTCCTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhhcCCceEEEecCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence 446789999999999999999999999999999998876655445578999999999999998886 7899999
Q ss_pred cC------------------------hhH------HHHHHHhCCCCeEEEEccccee
Q 029118 170 PS------------------------EGF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 170 ~a------------------------~G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
++ .|. ++..+++.+..+||++||...+
T Consensus 94 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~ 150 (266)
T 3p19_A 94 NAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGK 150 (266)
T ss_dssp CCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGT
T ss_pred CCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhC
Confidence 72 011 3444567788999999998765
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.50 E-value=1.3e-13 Score=113.28 Aligned_cols=100 Identities=19% Similarity=0.197 Sum_probs=79.0
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
..+++||||||+|+||++++++|+++|++|+++.|++++... ..+..++++.+|++|+++++++++ +
T Consensus 11 l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (260)
T 3awd_A 11 LDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGR 90 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 456789999999999999999999999999999998754321 124568999999999999998886 7
Q ss_pred ccEEEEcC---h----------------------hH--HHHHH----HhCCCCeEEEEccccee
Q 029118 164 VRSIICPS---E----------------------GF--ISNAG----SLKGVQHVILLSQGAVV 196 (198)
Q Consensus 164 vDaVIh~a---~----------------------G~--lldAA----~~~GVkRiV~vSS~~Vy 196 (198)
+|.|||++ . ++ +++++ ++.+..+||++||...+
T Consensus 91 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~ 154 (260)
T 3awd_A 91 VDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGL 154 (260)
T ss_dssp CCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred CCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhc
Confidence 89999972 0 11 23333 34678999999997654
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=1.7e-13 Score=113.61 Aligned_cols=101 Identities=15% Similarity=0.097 Sum_probs=80.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCC-ccccc---ccCCceEEEEccCCCHHHHHHhh-------cCcc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAME---SFGTYVESMAGDASNKKFLKTAL-------RGVR 165 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~-~~a~~---~~g~~vevV~GDl~D~~sL~~AL-------~GvD 165 (198)
..++++|||||+|+||++++++|+++|++|.++.|++ ++..+ ..+..++++.+|++|++++++++ .++|
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 84 (249)
T 2ew8_A 5 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD 84 (249)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence 4567899999999999999999999999999999987 44321 23556899999999999998886 4899
Q ss_pred EEEEcC-------------h-----------hH------HHHHHHhCCCCeEEEEcccceec
Q 029118 166 SIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 166 aVIh~a-------------~-----------G~------lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.|||++ + +. ++..+++.+..|||++||...+.
T Consensus 85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~ 146 (249)
T 2ew8_A 85 ILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWL 146 (249)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGS
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcc
Confidence 999972 0 11 23346667889999999987653
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=1.7e-13 Score=114.09 Aligned_cols=100 Identities=16% Similarity=0.165 Sum_probs=79.6
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cCCceEEEEccCCCHHHHHHhh--------c
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTAL--------R 162 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~AL--------~ 162 (198)
..++++|||||+|+||++++++|+++|++|+++.|++++.... .+..++++.+|++|++++++++ .
T Consensus 7 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g 86 (260)
T 2ae2_A 7 LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHG 86 (260)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4567899999999999999999999999999999987543211 2456889999999999999888 4
Q ss_pred CccEEEEcC-------------h-----------hH--HHHHH----HhCCCCeEEEEccccee
Q 029118 163 GVRSIICPS-------------E-----------GF--ISNAG----SLKGVQHVILLSQGAVV 196 (198)
Q Consensus 163 GvDaVIh~a-------------~-----------G~--lldAA----~~~GVkRiV~vSS~~Vy 196 (198)
++|.|||++ + ++ +++++ ++++..|||++||...+
T Consensus 87 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 150 (260)
T 2ae2_A 87 KLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGA 150 (260)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGT
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhc
Confidence 699999972 0 11 33333 56788999999998664
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=1.4e-13 Score=114.41 Aligned_cols=101 Identities=14% Similarity=0.141 Sum_probs=80.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
..++++|||||+|+||++++++|+++|++|.++.|++++... ..+..+.++.+|++|+++++++++ +
T Consensus 12 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 91 (260)
T 2zat_A 12 LENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGG 91 (260)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 456899999999999999999999999999999998754321 124568899999999999988876 8
Q ss_pred ccEEEEcC---h----------------------hH--H----HHHHHhCCCCeEEEEcccceec
Q 029118 164 VRSIICPS---E----------------------GF--I----SNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 164 vDaVIh~a---~----------------------G~--l----ldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
+|.|||++ . ++ + +..+++++..|||++||.++|.
T Consensus 92 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~ 156 (260)
T 2zat_A 92 VDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYH 156 (260)
T ss_dssp CCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS
T ss_pred CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcC
Confidence 99999972 0 11 2 2334567889999999987763
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=1.1e-13 Score=115.27 Aligned_cols=100 Identities=14% Similarity=0.157 Sum_probs=81.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc---ccCCceEEEEccCCCHHHHHHhhc-------CccE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~---~~g~~vevV~GDl~D~~sL~~AL~-------GvDa 166 (198)
..++++|||||+|+||++++++|+++|++|.++.|++++..+ .++..+.++.+|++|+++++++++ ++|.
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~ 82 (254)
T 1hdc_A 3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDG 82 (254)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 356789999999999999999999999999999998754322 224568899999999999998886 8999
Q ss_pred EEEcC-------------h-----------hH------HHHHHHhCCCCeEEEEccccee
Q 029118 167 IICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 167 VIh~a-------------~-----------G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
|||++ + +. +++.+++++..|||++||...+
T Consensus 83 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 142 (254)
T 1hdc_A 83 LVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGL 142 (254)
T ss_dssp EEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhc
Confidence 99972 0 11 4455667788999999998765
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.49 E-value=8.2e-14 Score=118.00 Aligned_cols=103 Identities=19% Similarity=0.228 Sum_probs=85.4
Q ss_pred cccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc---cccCCceEEEEccCCCHHHHHHhhc---CccEE
Q 029118 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALR---GVRSI 167 (198)
Q Consensus 94 ~~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~---~~~g~~vevV~GDl~D~~sL~~AL~---GvDaV 167 (198)
..+..++++|||||+|+||++++++|+++|++|.++.|+.++.. ...+..++++.+|++|+++++++++ ++|.|
T Consensus 11 ~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~l 90 (291)
T 3rd5_A 11 LPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVL 90 (291)
T ss_dssp CCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEE
T ss_pred ccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEE
Confidence 44567889999999999999999999999999999999876543 2235679999999999999999987 66999
Q ss_pred EEcC----------------------hhH--HHHHHHhCCCCeEEEEccccee
Q 029118 168 ICPS----------------------EGF--ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 168 Ih~a----------------------~G~--lldAA~~~GVkRiV~vSS~~Vy 196 (198)
||++ .++ +++++.....+|||++||.+.+
T Consensus 91 v~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~ 143 (291)
T 3rd5_A 91 INNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHW 143 (291)
T ss_dssp EECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGT
T ss_pred EECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhc
Confidence 9972 011 6777777777899999998764
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=1.6e-13 Score=113.08 Aligned_cols=100 Identities=12% Similarity=0.143 Sum_probs=78.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEe-CCccccc------ccCCceEEEEccCCCHHHHHHhhc-------
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK-DKRNAME------SFGTYVESMAGDASNKKFLKTALR------- 162 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR-~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~------- 162 (198)
..+++||||||+|+||++++++|+++|++|+++.| +++.... ..+..+.++.+|++|++++.++++
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 84 (261)
T 1gee_A 5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFG 84 (261)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 45679999999999999999999999999999999 5543221 124568899999999999998886
Q ss_pred CccEEEEcC-------------h-----------hH------HHHHHHhCC-CCeEEEEccccee
Q 029118 163 GVRSIICPS-------------E-----------GF------ISNAGSLKG-VQHVILLSQGAVV 196 (198)
Q Consensus 163 GvDaVIh~a-------------~-----------G~------lldAA~~~G-VkRiV~vSS~~Vy 196 (198)
++|.|||++ . ++ +++.+++.+ ..|||++||...+
T Consensus 85 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~ 149 (261)
T 1gee_A 85 KLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEK 149 (261)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGT
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhc
Confidence 899999972 0 11 233445556 7899999997654
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=1e-13 Score=114.91 Aligned_cols=101 Identities=8% Similarity=0.137 Sum_probs=79.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc---ccC--CceEEEEccCCCHHHHHHhhc-------Cc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFG--TYVESMAGDASNKKFLKTALR-------GV 164 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~---~~g--~~vevV~GDl~D~~sL~~AL~-------Gv 164 (198)
..++++|||||+|+||++++++|+++|++|+++.|+.+.... .++ ..++++.+|++|++++.++++ ++
T Consensus 14 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 93 (278)
T 2bgk_A 14 LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKL 93 (278)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 456799999999999999999999999999999998654321 112 268999999999999999886 89
Q ss_pred cEEEEcC---------------h-----------hH--HHHHH----HhCCCCeEEEEcccceec
Q 029118 165 RSIICPS---------------E-----------GF--ISNAG----SLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 165 DaVIh~a---------------~-----------G~--lldAA----~~~GVkRiV~vSS~~Vy~ 197 (198)
|.|||++ . ++ +++++ ++.+..|||++||..+|.
T Consensus 94 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~ 158 (278)
T 2bgk_A 94 DIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFT 158 (278)
T ss_dssp CEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTC
T ss_pred CEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccC
Confidence 9999872 0 01 33333 346789999999987764
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=1.4e-13 Score=112.31 Aligned_cols=101 Identities=19% Similarity=0.184 Sum_probs=78.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccccc--CCceEEEEccCCCHHHHHHhhc---CccEEEEcC
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTALR---GVRSIICPS 171 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~--g~~vevV~GDl~D~~sL~~AL~---GvDaVIh~a 171 (198)
..++++|||||+|+||++++++|+++|++|+++.|++++..... ..+++++.+|++|+++++++++ ++|.|||++
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~A 84 (244)
T 3d3w_A 5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNA 84 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECC
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEECC
Confidence 45678999999999999999999999999999999875543211 1357888999999999999986 589999972
Q ss_pred -------------h-----------hH--HHHHH----HhCC-CCeEEEEcccceec
Q 029118 172 -------------E-----------GF--ISNAG----SLKG-VQHVILLSQGAVVC 197 (198)
Q Consensus 172 -------------~-----------G~--lldAA----~~~G-VkRiV~vSS~~Vy~ 197 (198)
. ++ +++++ ++.+ ..+||++||...+.
T Consensus 85 g~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~ 141 (244)
T 3d3w_A 85 AVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQR 141 (244)
T ss_dssp CCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS
T ss_pred ccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhcc
Confidence 0 11 23333 3346 78999999987653
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.49 E-value=6.5e-14 Score=115.67 Aligned_cols=99 Identities=21% Similarity=0.262 Sum_probs=77.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEe-CCccccc------ccCCceEEEEccCCCHHHHHHhhc-------
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK-DKRNAME------SFGTYVESMAGDASNKKFLKTALR------- 162 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR-~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~------- 162 (198)
..+++||||||+|+||++++++|+++|++|+++.| +++.... ..+..++++.+|++|++++.++++
T Consensus 19 ~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 98 (274)
T 1ja9_A 19 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFG 98 (274)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 45679999999999999999999999999999999 5433211 125568899999999999999887
Q ss_pred CccEEEEcC------------------------hhH--HHHHHHhC---CCCeEEEEccccee
Q 029118 163 GVRSIICPS------------------------EGF--ISNAGSLK---GVQHVILLSQGAVV 196 (198)
Q Consensus 163 GvDaVIh~a------------------------~G~--lldAA~~~---GVkRiV~vSS~~Vy 196 (198)
++|.|||++ .++ +++++... + .|||++||.+++
T Consensus 99 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~ 160 (274)
T 1ja9_A 99 GLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSSIAAV 160 (274)
T ss_dssp CEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECCGGGT
T ss_pred CCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CEEEEEcChHhc
Confidence 899999972 011 34444332 5 799999998765
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.49 E-value=9.5e-14 Score=113.39 Aligned_cols=98 Identities=12% Similarity=0.231 Sum_probs=77.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC-------cEEEEEeCCcccccc------cCCceEEEEccCCCHHHHHHhhc---
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRT-------RIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR--- 162 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~-------~VralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~AL~--- 162 (198)
+++||||||+|+||++++++|+++|+ +|.++.|++++.... .+..++++.+|++|++++.++++
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 81 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV 81 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence 46899999999999999999999999 899999987543211 14568999999999999998886
Q ss_pred ----CccEEEEcC------------------------hhH--HHHH----HHhCCCCeEEEEccccee
Q 029118 163 ----GVRSIICPS------------------------EGF--ISNA----GSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 163 ----GvDaVIh~a------------------------~G~--lldA----A~~~GVkRiV~vSS~~Vy 196 (198)
++|.|||++ .++ ++++ +++.+..|||++||..++
T Consensus 82 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~ 149 (244)
T 2bd0_A 82 ERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAAT 149 (244)
T ss_dssp HHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred HhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhc
Confidence 799999972 011 3333 345688999999998765
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.48 E-value=2e-13 Score=114.01 Aligned_cols=101 Identities=14% Similarity=0.182 Sum_probs=81.0
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------c--CCceEEEEccCCCHHHHHHhhc-----
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------F--GTYVESMAGDASNKKFLKTALR----- 162 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~--g~~vevV~GDl~D~~sL~~AL~----- 162 (198)
...++++|||||+|+||++++++|+++|++|.++.|++++.... . +..+.++.+|++|+++++++++
T Consensus 10 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 89 (267)
T 1iy8_A 10 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER 89 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 35578999999999999999999999999999999987543211 1 4568999999999999998886
Q ss_pred --CccEEEEcC----h---------------------hH------HHHHHHhCCCCeEEEEccccee
Q 029118 163 --GVRSIICPS----E---------------------GF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 163 --GvDaVIh~a----~---------------------G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
++|.|||++ . +. +++.+++++..|||++||...+
T Consensus 90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 156 (267)
T 1iy8_A 90 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGI 156 (267)
T ss_dssp HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGT
T ss_pred cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhc
Confidence 789999972 1 00 3455667788999999997654
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.48 E-value=7.1e-14 Score=113.68 Aligned_cols=97 Identities=10% Similarity=0.144 Sum_probs=76.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEE-EeCCcccccc------cCCceEE-EEccCCCHHHHHHhhc-------C
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAMES------FGTYVES-MAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~Vral-vR~~~~a~~~------~g~~vev-V~GDl~D~~sL~~AL~-------G 163 (198)
+++||||||+|+||++++++|+++|++|+++ .|++++.... .+..+.. +.+|++|+++++++++ +
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG 80 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence 3689999999999999999999999999998 7776543211 2345666 9999999999998864 8
Q ss_pred ccEEEEcC------------------------hhH------HHHHHHhCCCCeEEEEcccce
Q 029118 164 VRSIICPS------------------------EGF------ISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 164 vDaVIh~a------------------------~G~------lldAA~~~GVkRiV~vSS~~V 195 (198)
+|+|||++ .+. +++++++.+.+|||++||...
T Consensus 81 ~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~ 142 (245)
T 2ph3_A 81 LDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVG 142 (245)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhh
Confidence 99999972 011 345566778999999999754
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.48 E-value=2.9e-13 Score=113.73 Aligned_cols=98 Identities=18% Similarity=0.336 Sum_probs=80.7
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc-------CccEEE
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSII 168 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~-------GvDaVI 168 (198)
...++++|||||+|+||++++++|+++|++|.++.|+.++.. ...++++.+|++|++++.++++ ++|.||
T Consensus 25 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv 101 (260)
T 3un1_A 25 RNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA---DPDIHTVAGDISKPETADRIVREGIERFGRIDSLV 101 (260)
T ss_dssp HTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS---STTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc---cCceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEE
Confidence 456789999999999999999999999999999999876543 2368999999999999999886 899999
Q ss_pred EcC------------------------hhH--HHHHH----HhCCCCeEEEEccccee
Q 029118 169 CPS------------------------EGF--ISNAG----SLKGVQHVILLSQGAVV 196 (198)
Q Consensus 169 h~a------------------------~G~--lldAA----~~~GVkRiV~vSS~~Vy 196 (198)
|++ .|+ +++++ ++++..+||++||..++
T Consensus 102 ~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~ 159 (260)
T 3un1_A 102 NNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVD 159 (260)
T ss_dssp ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTT
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhc
Confidence 972 011 33443 67889999999997654
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.48 E-value=2.3e-13 Score=110.13 Aligned_cols=72 Identities=24% Similarity=0.282 Sum_probs=62.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC--CcEEEEEeCCcccccc---cCCceEEEEccCCCHHHHHHhhc---------Cc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR---------GV 164 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G--~~VralvR~~~~a~~~---~g~~vevV~GDl~D~~sL~~AL~---------Gv 164 (198)
++++|||||+|+||++++++|+++| ++|+++.|++++.... .+..++++.+|++|++++.++++ ++
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~i 82 (250)
T 1yo6_A 3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL 82 (250)
T ss_dssp CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred CCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCCC
Confidence 5689999999999999999999999 9999999987654322 14578999999999999999887 89
Q ss_pred cEEEEc
Q 029118 165 RSIICP 170 (198)
Q Consensus 165 DaVIh~ 170 (198)
|.|||+
T Consensus 83 d~li~~ 88 (250)
T 1yo6_A 83 SLLINN 88 (250)
T ss_dssp CEEEEC
T ss_pred cEEEEC
Confidence 999997
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.48 E-value=7.7e-14 Score=110.91 Aligned_cols=85 Identities=16% Similarity=0.173 Sum_probs=70.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcC---ccEEEEcC----
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG---VRSIICPS---- 171 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~G---vDaVIh~a---- 171 (198)
+|++|||||+|+||++++++|+ +|++|+++.|++. .+.+|++|+++++++++. +|+|||++
T Consensus 3 kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-----------~~~~D~~~~~~~~~~~~~~~~~d~vi~~ag~~~ 70 (202)
T 3d7l_A 3 AMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-----------DVTVDITNIDSIKKMYEQVGKVDAIVSATGSAT 70 (202)
T ss_dssp SCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-----------SEECCTTCHHHHHHHHHHHCCEEEEEECCCCCC
T ss_pred CcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-----------ceeeecCCHHHHHHHHHHhCCCCEEEECCCCCC
Confidence 4589999999999999999999 9999999999764 478999999999999876 89999972
Q ss_pred ---------h-----------hH--HHHHHHhC---CCCeEEEEccccee
Q 029118 172 ---------E-----------GF--ISNAGSLK---GVQHVILLSQGAVV 196 (198)
Q Consensus 172 ---------~-----------G~--lldAA~~~---GVkRiV~vSS~~Vy 196 (198)
+ ++ +++++... + .|||++||..++
T Consensus 71 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~ 119 (202)
T 3d7l_A 71 FSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDK-GSFTLTTGIMME 119 (202)
T ss_dssp CCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEE-EEEEEECCGGGT
T ss_pred CCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccC-CEEEEEcchhhc
Confidence 0 11 45555544 4 799999998664
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=1e-13 Score=113.33 Aligned_cols=74 Identities=16% Similarity=0.155 Sum_probs=63.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeC-Ccccccc------cCCceEEEEccCCCHHHHHHhhc-------
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-KRNAMES------FGTYVESMAGDASNKKFLKTALR------- 162 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~-~~~a~~~------~g~~vevV~GDl~D~~sL~~AL~------- 162 (198)
..++++|||||+|+||++++++|+++|++|+++.|+ +++.... .+..++++.+|++|+++++++++
T Consensus 5 l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 84 (258)
T 3afn_B 5 LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFG 84 (258)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 456799999999999999999999999999999998 5543211 24578999999999999999987
Q ss_pred CccEEEEc
Q 029118 163 GVRSIICP 170 (198)
Q Consensus 163 GvDaVIh~ 170 (198)
++|+|||+
T Consensus 85 ~id~vi~~ 92 (258)
T 3afn_B 85 GIDVLINN 92 (258)
T ss_dssp SCSEEEEC
T ss_pred CCCEEEEC
Confidence 89999997
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.48 E-value=2.5e-13 Score=114.36 Aligned_cols=101 Identities=16% Similarity=0.178 Sum_probs=79.9
Q ss_pred cccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc-------ccCCceEEEEccCCCHHHHHHhhc----
Q 029118 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------SFGTYVESMAGDASNKKFLKTALR---- 162 (198)
Q Consensus 94 ~~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~-------~~g~~vevV~GDl~D~~sL~~AL~---- 162 (198)
+....++++|||||+|+||++++++|+++|++|.++.|++++... ..+..+.++.+|++|+++++++++
T Consensus 16 ~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 95 (267)
T 1vl8_A 16 VFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKE 95 (267)
T ss_dssp -CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 345667899999999999999999999999999999998754321 125568899999999999998876
Q ss_pred ---CccEEEEcC-------------h-----------hH--H----HHHHHhCCCCeEEEEcccc
Q 029118 163 ---GVRSIICPS-------------E-----------GF--I----SNAGSLKGVQHVILLSQGA 194 (198)
Q Consensus 163 ---GvDaVIh~a-------------~-----------G~--l----ldAA~~~GVkRiV~vSS~~ 194 (198)
++|.|||++ + |+ + +..+++.+..|||++||.+
T Consensus 96 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~ 160 (267)
T 1vl8_A 96 KFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLT 160 (267)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGG
T ss_pred HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcc
Confidence 789999972 0 11 2 3334567889999999976
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.48 E-value=1.3e-13 Score=113.97 Aligned_cols=98 Identities=14% Similarity=0.219 Sum_probs=78.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEe-CCccccc------ccCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK-DKRNAME------SFGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR-~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
.++++|||||+|+||++++++|+++|++|.++.| ++++..+ ..+..+.++.+|++|+++++++++ +
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (246)
T 2uvd_A 3 KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQ 82 (246)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4678999999999999999999999999999999 5543221 124568899999999999998886 7
Q ss_pred ccEEEEcC------------------------hhH------HHHHHHhCCCCeEEEEcccce
Q 029118 164 VRSIICPS------------------------EGF------ISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 164 vDaVIh~a------------------------~G~------lldAA~~~GVkRiV~vSS~~V 195 (198)
+|.|||++ .+. ++..+++.+..|||++||...
T Consensus 83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~ 144 (246)
T 2uvd_A 83 VDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVG 144 (246)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHh
Confidence 99999972 011 334455678899999999754
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=99.48 E-value=9e-14 Score=113.25 Aligned_cols=97 Identities=19% Similarity=0.283 Sum_probs=75.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEE-EeCCccccc------ccCCceEEEEccCCCHHHHHHhhc-------Cc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GV 164 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~Vral-vR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~-------Gv 164 (198)
+++||||||||+||++++++|+++|++|+++ .|+++.... ..+..+.++.+|++|+++++++++ ++
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 80 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI 80 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 3689999999999999999999999999995 676544321 124568899999999999999886 79
Q ss_pred cEEEEcC-------------h-----------hH--HHHHH----HhCCCCeEEEEcccce
Q 029118 165 RSIICPS-------------E-----------GF--ISNAG----SLKGVQHVILLSQGAV 195 (198)
Q Consensus 165 DaVIh~a-------------~-----------G~--lldAA----~~~GVkRiV~vSS~~V 195 (198)
|.|||++ . ++ +++++ ++.+..|||++||...
T Consensus 81 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~ 141 (244)
T 1edo_A 81 DVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVG 141 (244)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHH
T ss_pred CEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhh
Confidence 9999972 0 11 23333 3468899999999754
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.47 E-value=2.6e-13 Score=112.94 Aligned_cols=104 Identities=15% Similarity=0.128 Sum_probs=77.3
Q ss_pred CCccccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCC-CHHHHHHhhcCccEEEE
Q 029118 91 EDEFPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDAS-NKKFLKTALRGVRSIIC 169 (198)
Q Consensus 91 ~~~~~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~-D~~sL~~AL~GvDaVIh 169 (198)
.+.+....++++|||||+|+||++++++|+++|++|+++.|+++...+. + .+.++ +|+. +.+.+.+.+.++|.|||
T Consensus 11 ~~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~-~-~~~~~-~D~~~~~~~~~~~~~~iD~lv~ 87 (249)
T 1o5i_A 11 HHMELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS-G-HRYVV-CDLRKDLDLLFEKVKEVDILVL 87 (249)
T ss_dssp -----CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT-C-SEEEE-CCTTTCHHHHHHHSCCCSEEEE
T ss_pred hhHHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHhh-C-CeEEE-eeHHHHHHHHHHHhcCCCEEEE
Confidence 4446678889999999999999999999999999999999987443332 3 46677 9993 44555555669999999
Q ss_pred cC------------------------hhH------HHHHHHhCCCCeEEEEcccceec
Q 029118 170 PS------------------------EGF------ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 170 ~a------------------------~G~------lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
++ .+. +++.+++++..|||++||..+|.
T Consensus 88 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~ 145 (249)
T 1o5i_A 88 NAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVIS 145 (249)
T ss_dssp CCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcC
Confidence 72 011 35666777899999999987753
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.47 E-value=2.5e-13 Score=112.97 Aligned_cols=100 Identities=14% Similarity=0.101 Sum_probs=78.8
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc---ccCCceEEEEccCCCHHHHHHhhc-------CccE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~---~~g~~vevV~GDl~D~~sL~~AL~-------GvDa 166 (198)
..++++|||||+|+||++++++|+++|++|+++.|++++... .....+.++.+|++|+++++++++ ++|.
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~ 89 (263)
T 3ak4_A 10 LSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDL 89 (263)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCE
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 456799999999999999999999999999999998755422 122368899999999999999887 8999
Q ss_pred EEEcC-------------h-----------hH--HHH----HHHhCC-CCeEEEEccccee
Q 029118 167 IICPS-------------E-----------GF--ISN----AGSLKG-VQHVILLSQGAVV 196 (198)
Q Consensus 167 VIh~a-------------~-----------G~--lld----AA~~~G-VkRiV~vSS~~Vy 196 (198)
|||++ + ++ +++ .+++.+ ..+||++||...+
T Consensus 90 lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 150 (263)
T 3ak4_A 90 LCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAK 150 (263)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGT
T ss_pred EEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccc
Confidence 99972 0 11 223 334456 7999999997654
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=7.4e-14 Score=114.34 Aligned_cols=99 Identities=15% Similarity=0.118 Sum_probs=77.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHH-CCCcEEEEEeCCcccccc------cCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIV-KRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~-~G~~VralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
.+++||||||+|+||++++++|++ +|++|+++.|++++.... .+..++++.+|++|+++++++++ +
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 82 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG 82 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 467899999999999999999999 999999999987543211 24568999999999999999887 8
Q ss_pred ccEEEEcC------------h------------hH--HHHHHHhCC--CCeEEEEccccee
Q 029118 164 VRSIICPS------------E------------GF--ISNAGSLKG--VQHVILLSQGAVV 196 (198)
Q Consensus 164 vDaVIh~a------------~------------G~--lldAA~~~G--VkRiV~vSS~~Vy 196 (198)
+|.|||++ . ++ +++++...- ..|||++||..++
T Consensus 83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~ 143 (276)
T 1wma_A 83 LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSV 143 (276)
T ss_dssp EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHH
T ss_pred CCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhh
Confidence 99999982 0 11 455555442 2499999997654
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=1.7e-13 Score=114.13 Aligned_cols=99 Identities=14% Similarity=0.116 Sum_probs=79.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc-cccc---c----CCceEEEEccCCCHHHHHHhhc-------
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AMES---F----GTYVESMAGDASNKKFLKTALR------- 162 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~-a~~~---~----g~~vevV~GDl~D~~sL~~AL~------- 162 (198)
.++++|||||+|+||++++++|+++|++|.++.|+++. .... . +..+.++.+|++|+++++++++
T Consensus 3 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 82 (260)
T 1x1t_A 3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG 82 (260)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 46789999999999999999999999999999998765 3211 1 4568899999999999998886
Q ss_pred CccEEEEcC-------------h-----------hH------HHHHHHhCCCCeEEEEccccee
Q 029118 163 GVRSIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 163 GvDaVIh~a-------------~-----------G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
++|.|||++ + ++ ++..+++++..|||++||...+
T Consensus 83 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 146 (260)
T 1x1t_A 83 RIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGL 146 (260)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhC
Confidence 799999972 0 11 2333456688999999998664
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=99.47 E-value=2e-13 Score=114.04 Aligned_cols=100 Identities=13% Similarity=0.133 Sum_probs=81.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cCCceEEEEccCCCHHHHHHhhcC-------
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALRG------- 163 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~AL~G------- 163 (198)
..++++|||||+|+||++++++|+++|++|.++.|++++.... .+..++++.+|++|++++.++++.
T Consensus 32 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 111 (279)
T 3ctm_A 32 LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGT 111 (279)
T ss_dssp CTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 4567999999999999999999999999999999987643211 245689999999999999988864
Q ss_pred ccEEEEcC----h----------------------h------HHHHHHHhCCCCeEEEEccccee
Q 029118 164 VRSIICPS----E----------------------G------FISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 164 vDaVIh~a----~----------------------G------~lldAA~~~GVkRiV~vSS~~Vy 196 (198)
+|.|||++ . + .+++++++.+..|||++||..++
T Consensus 112 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~ 176 (279)
T 3ctm_A 112 IDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGK 176 (279)
T ss_dssp CSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTS
T ss_pred CCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhc
Confidence 89999971 1 1 14566777889999999998654
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.46 E-value=2.7e-13 Score=111.46 Aligned_cols=103 Identities=12% Similarity=0.117 Sum_probs=82.0
Q ss_pred cccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc---cccCCceEEEEccCCCHHHHHHhhc---CccEE
Q 029118 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALR---GVRSI 167 (198)
Q Consensus 94 ~~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~---~~~g~~vevV~GDl~D~~sL~~AL~---GvDaV 167 (198)
....++++||||||+|+||++++++|+++|++|.++.|+.++.. ......++++.+|++|++.+.++++ ++|.|
T Consensus 9 ~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~l 88 (249)
T 3f9i_A 9 MIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDIL 88 (249)
T ss_dssp CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEE
T ss_pred cccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEE
Confidence 45667789999999999999999999999999999999876543 2234578999999999999999886 78999
Q ss_pred EEcC------------------------hhH--H----HHHHHhCCCCeEEEEccccee
Q 029118 168 ICPS------------------------EGF--I----SNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 168 Ih~a------------------------~G~--l----ldAA~~~GVkRiV~vSS~~Vy 196 (198)
||++ .++ + +..+++.+..|||++||...+
T Consensus 89 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~ 147 (249)
T 3f9i_A 89 VCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGI 147 (249)
T ss_dssp EECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC-
T ss_pred EECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhc
Confidence 9972 011 2 333455678899999998765
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.46 E-value=2.2e-13 Score=115.10 Aligned_cols=102 Identities=19% Similarity=0.221 Sum_probs=79.4
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhc------
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR------ 162 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~------ 162 (198)
....+++||||||+|+||++++++|+++|++|+++.|++++... ..+..+.++.+|++|+++++++++
T Consensus 40 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 119 (285)
T 2c07_A 40 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH 119 (285)
T ss_dssp CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred ccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhc
Confidence 34556799999999999999999999999999998887654321 124568899999999999998874
Q ss_pred -CccEEEEcC------------------------hhH------HHHHHHhCCCCeEEEEccccee
Q 029118 163 -GVRSIICPS------------------------EGF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 163 -GvDaVIh~a------------------------~G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
++|.|||++ .++ ++..+++.+..+||++||...+
T Consensus 120 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~ 184 (285)
T 2c07_A 120 KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGL 184 (285)
T ss_dssp SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHH
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhc
Confidence 789999972 011 2333446788999999997543
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=3.2e-13 Score=114.02 Aligned_cols=101 Identities=13% Similarity=0.172 Sum_probs=79.4
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cCCceEEEEccCCCHHHHHHhhc-------
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------- 162 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~AL~------- 162 (198)
...++++|||||+|+||++++++|+++|++|+++.|++++.... .+..+.++.+|++|++++.++++
T Consensus 19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 98 (277)
T 2rhc_B 19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYG 98 (277)
T ss_dssp CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 45668999999999999999999999999999999987543211 24568999999999999988876
Q ss_pred CccEEEEcC------------------------hhH--HHHHHH------hCCCCeEEEEccccee
Q 029118 163 GVRSIICPS------------------------EGF--ISNAGS------LKGVQHVILLSQGAVV 196 (198)
Q Consensus 163 GvDaVIh~a------------------------~G~--lldAA~------~~GVkRiV~vSS~~Vy 196 (198)
++|.|||++ .++ +++++. +++..+||++||.+.+
T Consensus 99 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~ 164 (277)
T 2rhc_B 99 PVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGK 164 (277)
T ss_dssp SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGT
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccc
Confidence 789999972 011 344433 3477999999997654
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.46 E-value=7.3e-13 Score=109.88 Aligned_cols=96 Identities=10% Similarity=0.159 Sum_probs=77.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc-------CccEEEE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~-------GvDaVIh 169 (198)
..++++|||||+|+||++++++|+++|++|.++.|+++.. .. ++.++.+|++|++++.++++ ++|.|||
T Consensus 5 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~--~~--~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~ 80 (250)
T 2fwm_X 5 FSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQE--QY--PFATEVMDVADAAQVAQVCQRLLAETERLDALVN 80 (250)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCSS--CC--SSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhhh--cC--CceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 3467899999999999999999999999999999987532 12 28899999999999999886 7999999
Q ss_pred cC-------------h-----------hH--HHHHH----HhCCCCeEEEEccccee
Q 029118 170 PS-------------E-----------GF--ISNAG----SLKGVQHVILLSQGAVV 196 (198)
Q Consensus 170 ~a-------------~-----------G~--lldAA----~~~GVkRiV~vSS~~Vy 196 (198)
++ + ++ +++++ ++++..|||++||...+
T Consensus 81 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~ 137 (250)
T 2fwm_X 81 AAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAH 137 (250)
T ss_dssp CCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGT
T ss_pred CCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhC
Confidence 72 0 11 33333 56788999999998765
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.46 E-value=1.2e-13 Score=113.69 Aligned_cols=99 Identities=22% Similarity=0.221 Sum_probs=75.6
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cC-------CceEEEEccCCCHHHHHHhhcC
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FG-------TYVESMAGDASNKKFLKTALRG 163 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g-------~~vevV~GDl~D~~sL~~AL~G 163 (198)
..++++|||||+|+||++++++|+++|++|+++.|++++.... .+ ..++++.+|++|++++.++++.
T Consensus 5 ~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 84 (264)
T 2pd6_A 5 LRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQ 84 (264)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHH
Confidence 3467899999999999999999999999999999987543211 11 4588999999999999998876
Q ss_pred c--------cEEEEcC------------------------hhH--HHHH----HHhCC-CCeEEEEcccce
Q 029118 164 V--------RSIICPS------------------------EGF--ISNA----GSLKG-VQHVILLSQGAV 195 (198)
Q Consensus 164 v--------DaVIh~a------------------------~G~--lldA----A~~~G-VkRiV~vSS~~V 195 (198)
+ |.|||++ .++ ++++ +++.+ ..|||++||...
T Consensus 85 ~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~ 155 (264)
T 2pd6_A 85 VQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVG 155 (264)
T ss_dssp HHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHH
T ss_pred HHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhh
Confidence 4 9999972 011 3333 33445 689999999754
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=5e-13 Score=110.09 Aligned_cols=74 Identities=18% Similarity=0.144 Sum_probs=64.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc---ccCCceEEEEccCCCHHHHHHhhc-------CccE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~---~~g~~vevV~GDl~D~~sL~~AL~-------GvDa 166 (198)
..++++|||||+|+||++++++|+++|++|.++.|++++... .++..++++.+|++|+++++++++ ++|.
T Consensus 10 ~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 89 (265)
T 2o23_A 10 VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDV 89 (265)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence 456799999999999999999999999999999998765432 235578999999999999999987 8999
Q ss_pred EEEc
Q 029118 167 IICP 170 (198)
Q Consensus 167 VIh~ 170 (198)
|||+
T Consensus 90 li~~ 93 (265)
T 2o23_A 90 AVNC 93 (265)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9997
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.45 E-value=2.9e-13 Score=111.29 Aligned_cols=74 Identities=18% Similarity=0.369 Sum_probs=62.1
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc-------ccCCceEEEEccCCCHHHHHHhhcC------
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------SFGTYVESMAGDASNKKFLKTALRG------ 163 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~-------~~g~~vevV~GDl~D~~sL~~AL~G------ 163 (198)
..++++|||||+|+||++++++|+++|++|.++.|+..+... ..+..++++.+|++|+++++++++.
T Consensus 12 ~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 91 (265)
T 1h5q_A 12 FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLG 91 (265)
T ss_dssp CTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence 446789999999999999999999999999999997654321 1255789999999999999888754
Q ss_pred -ccEEEEc
Q 029118 164 -VRSIICP 170 (198)
Q Consensus 164 -vDaVIh~ 170 (198)
+|.|||+
T Consensus 92 ~id~li~~ 99 (265)
T 1h5q_A 92 PISGLIAN 99 (265)
T ss_dssp SEEEEEEC
T ss_pred CCCEEEEC
Confidence 8999997
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.45 E-value=4.2e-13 Score=110.85 Aligned_cols=100 Identities=14% Similarity=0.115 Sum_probs=78.0
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccccc-CCceEEEEccCCCHHHHHHhh---cCccEEEEcC-
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTAL---RGVRSIICPS- 171 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~-g~~vevV~GDl~D~~sL~~AL---~GvDaVIh~a- 171 (198)
..++++|||||+|+||++++++|+++|++|+++.|++++..... -.+++++.+|++|++++++++ .++|.|||++
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~Ag 83 (246)
T 2ag5_A 4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAG 83 (246)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHHHHHHHhCCCCEEEECCc
Confidence 35678999999999999999999999999999999876543222 125889999999999998774 5789999972
Q ss_pred ------------h-----------hH--HHHH----HHhCCCCeEEEEccccee
Q 029118 172 ------------E-----------GF--ISNA----GSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 172 ------------~-----------G~--lldA----A~~~GVkRiV~vSS~~Vy 196 (198)
+ ++ ++++ +++++..|||++||.+.+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 137 (246)
T 2ag5_A 84 FVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASS 137 (246)
T ss_dssp CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTT
T ss_pred cCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhC
Confidence 0 11 2333 345688999999997654
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.45 E-value=3.5e-13 Score=111.02 Aligned_cols=100 Identities=18% Similarity=0.126 Sum_probs=78.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
..++++|||||+|+||++++++|+++|++|.++.|+.++... ..+..+.++.+|++|+++++++++ +
T Consensus 7 ~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 86 (253)
T 3qiv_A 7 FENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGG 86 (253)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 457899999999999999999999999999999998765422 124678999999999999998886 8
Q ss_pred ccEEEEcC-h--------------------------hH------HHHHHHhCCCCeEEEEccccee
Q 029118 164 VRSIICPS-E--------------------------GF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 164 vDaVIh~a-~--------------------------G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
+|.|||++ . +. ++..+++.+..+||++||...|
T Consensus 87 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 152 (253)
T 3qiv_A 87 IDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAW 152 (253)
T ss_dssp CCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC----
T ss_pred CCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCcccc
Confidence 99999972 0 10 3444566788999999998765
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.45 E-value=3.5e-13 Score=111.93 Aligned_cols=98 Identities=20% Similarity=0.215 Sum_probs=77.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cCCceEEEEccCCCHHHHHHhhc-------Ccc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GVR 165 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~AL~-------GvD 165 (198)
++++|||||+|+||++++++|+++|++|+++.|++++.... .+..+.++.+|++|++++.++++ ++|
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 81 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD 81 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence 36899999999999999999999999999999987543211 24568899999999999999887 899
Q ss_pred EEEEcC-------------h-----------hH------HHHHHHhCC-CCeEEEEccccee
Q 029118 166 SIICPS-------------E-----------GF------ISNAGSLKG-VQHVILLSQGAVV 196 (198)
Q Consensus 166 aVIh~a-------------~-----------G~------lldAA~~~G-VkRiV~vSS~~Vy 196 (198)
.|||++ + ++ ++..+++.+ ..+||++||...+
T Consensus 82 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 143 (256)
T 1geg_A 82 VIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGH 143 (256)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhc
Confidence 999972 0 11 234444556 7899999997643
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=2.5e-13 Score=114.37 Aligned_cols=101 Identities=9% Similarity=0.074 Sum_probs=78.4
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-------cCCceEEEEccCCCHHHHHHhhcC-----
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALRG----- 163 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-------~g~~vevV~GDl~D~~sL~~AL~G----- 163 (198)
...++++|||||+|+||++++++|+++|++|+++.|++++.... .+..+.++.+|++|+++++++++.
T Consensus 23 ~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 102 (302)
T 1w6u_A 23 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVA 102 (302)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHc
Confidence 35568999999999999999999999999999999987543211 155789999999999999988865
Q ss_pred --ccEEEEcC----h--------------------hH--HHHHH----H-hCCCCeEEEEccccee
Q 029118 164 --VRSIICPS----E--------------------GF--ISNAG----S-LKGVQHVILLSQGAVV 196 (198)
Q Consensus 164 --vDaVIh~a----~--------------------G~--lldAA----~-~~GVkRiV~vSS~~Vy 196 (198)
+|.|||++ . ++ +++++ + +.+..+||++||..++
T Consensus 103 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~ 168 (302)
T 1w6u_A 103 GHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAE 168 (302)
T ss_dssp CSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHH
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccc
Confidence 49999972 0 11 22333 2 4567899999997654
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.45 E-value=1.6e-13 Score=114.07 Aligned_cols=100 Identities=15% Similarity=0.132 Sum_probs=79.6
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc---ccCCceEEEEccCCCHHHHHHhhcC-------ccE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALRG-------VRS 166 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~---~~g~~vevV~GDl~D~~sL~~AL~G-------vDa 166 (198)
..++++|||||+|+||++++++|+++|++|.++.|++++..+ ..+..+.++++|++|+++++++++. +|.
T Consensus 4 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 83 (253)
T 1hxh_A 4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV 83 (253)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 456789999999999999999999999999999998754322 2255689999999999999888764 699
Q ss_pred EEEcC-------------h-----------hH------HHHHHHhCCCCeEEEEcccceec
Q 029118 167 IICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 167 VIh~a-------------~-----------G~------lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
|||++ + +. ++..+++.+ .|||++||...+.
T Consensus 84 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~ 143 (253)
T 1hxh_A 84 LVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWL 143 (253)
T ss_dssp EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTS
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcC
Confidence 99972 0 10 345566678 9999999987653
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.45 E-value=1.8e-13 Score=114.06 Aligned_cols=100 Identities=14% Similarity=0.113 Sum_probs=77.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc----c----cCCceEEEEccCCCHHHHHHhhc-------
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME----S----FGTYVESMAGDASNKKFLKTALR------- 162 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~----~----~g~~vevV~GDl~D~~sL~~AL~------- 162 (198)
.++++|||||+|+||++++++|+++|++|+++.|++++... . .+..+.++.+|++|++++.++++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (267)
T 2gdz_A 6 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG 85 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence 35689999999999999999999999999999998754321 1 13458899999999999998886
Q ss_pred CccEEEEcC----------------hhH------HHHHHHhCC---CCeEEEEcccceec
Q 029118 163 GVRSIICPS----------------EGF------ISNAGSLKG---VQHVILLSQGAVVC 197 (198)
Q Consensus 163 GvDaVIh~a----------------~G~------lldAA~~~G---VkRiV~vSS~~Vy~ 197 (198)
.+|.|||++ .+. +++++++.+ ..+||++||...+.
T Consensus 86 ~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~ 145 (267)
T 2gdz_A 86 RLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLM 145 (267)
T ss_dssp CCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS
T ss_pred CCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccC
Confidence 469999982 011 345555543 78999999987653
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=6e-13 Score=110.41 Aligned_cols=99 Identities=15% Similarity=0.166 Sum_probs=77.8
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
..++++|||||+|+||++++++|+++|++|.++.|++++.... .+..+.++.+|++|+++++++++ +
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 84 (247)
T 2jah_A 5 LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGG 84 (247)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 3467999999999999999999999999999999987543211 24568999999999999998875 7
Q ss_pred ccEEEEcC------------------------hhH--HH----HHHHhCCCCeEEEEccccee
Q 029118 164 VRSIICPS------------------------EGF--IS----NAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 164 vDaVIh~a------------------------~G~--ll----dAA~~~GVkRiV~vSS~~Vy 196 (198)
+|.|||++ .|+ ++ ..+++.+ .+||++||...+
T Consensus 85 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~ 146 (247)
T 2jah_A 85 LDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGR 146 (247)
T ss_dssp CSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGT
T ss_pred CCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhc
Confidence 99999972 011 22 3334556 899999997654
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=99.44 E-value=3.4e-13 Score=110.99 Aligned_cols=96 Identities=17% Similarity=0.268 Sum_probs=75.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhh-------cCccEEEEcC
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL-------RGVRSIICPS 171 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL-------~GvDaVIh~a 171 (198)
++++|||||+|+||++++++|+++|++|+++.|++++..+..+ +.++.+|++| +++.+++ .++|.|||++
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~--~~~~~~D~~~-~~~~~~~~~~~~~~g~id~lv~~A 78 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSLG--AVPLPTDLEK-DDPKGLVKRALEALGGLHVLVHAA 78 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHT--CEEEECCTTT-SCHHHHHHHHHHHHTSCCEEEECC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhhC--cEEEecCCch-HHHHHHHHHHHHHcCCCCEEEECC
Confidence 4689999999999999999999999999999999866433333 7899999999 7776655 3799999972
Q ss_pred ------------------------hhH------HHHHHHhCCCCeEEEEcccceec
Q 029118 172 ------------------------EGF------ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 ------------------------~G~------lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.++ ++..+++++..|||++||...+.
T Consensus 79 g~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~ 134 (239)
T 2ekp_A 79 AVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFT 134 (239)
T ss_dssp CCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS
T ss_pred CCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcc
Confidence 011 23334567889999999987653
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.44 E-value=6e-13 Score=111.95 Aligned_cols=101 Identities=19% Similarity=0.170 Sum_probs=79.8
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhh--------c
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTAL--------R 162 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL--------~ 162 (198)
..++++|||||+|+||++++++|+++|++|+++.|++++... ..+..+.++.+|++|++++++++ .
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g 98 (273)
T 1ae1_A 19 LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG 98 (273)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 456789999999999999999999999999999998754321 12456899999999999999887 5
Q ss_pred CccEEEEcC-------------h-----------hH--HHHH----HHhCCCCeEEEEcccceec
Q 029118 163 GVRSIICPS-------------E-----------GF--ISNA----GSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 163 GvDaVIh~a-------------~-----------G~--lldA----A~~~GVkRiV~vSS~~Vy~ 197 (198)
++|.|||++ + ++ ++++ +++.+..|||++||.+.+.
T Consensus 99 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~ 163 (273)
T 1ae1_A 99 KLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFS 163 (273)
T ss_dssp CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTS
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcC
Confidence 789999972 0 11 2333 3466789999999987653
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.44 E-value=4.6e-13 Score=111.45 Aligned_cols=97 Identities=13% Similarity=0.095 Sum_probs=76.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc---cCCceEEEEccCCCHHHHHHhhc-------CccE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRS 166 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~---~g~~vevV~GDl~D~~sL~~AL~-------GvDa 166 (198)
..++++|||||+|+||++++++|+++|++|.++.|++++ .+. .. . +++++|++|+++++++++ ++|.
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~-~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~ 80 (256)
T 2d1y_A 4 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG-G-AFFQVDLEDERERVRFVEEAAYALGRVDV 80 (256)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT-C-EEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh-C-CEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 346789999999999999999999999999999998765 221 12 3 789999999999988875 7899
Q ss_pred EEEcC-------------h-----------hH--H----HHHHHhCCCCeEEEEccccee
Q 029118 167 IICPS-------------E-----------GF--I----SNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 167 VIh~a-------------~-----------G~--l----ldAA~~~GVkRiV~vSS~~Vy 196 (198)
|||++ + ++ + +..+++++..|||++||...+
T Consensus 81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~ 140 (256)
T 2d1y_A 81 LVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGL 140 (256)
T ss_dssp EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGT
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcccccc
Confidence 99972 0 11 2 333456788999999997654
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=99.44 E-value=6e-13 Score=110.65 Aligned_cols=98 Identities=18% Similarity=0.169 Sum_probs=77.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc--ccc------ccCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--AME------SFGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~--a~~------~~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
++++|||||+|+||++++++|+++|++|.++.|++++ ... ..+..+.++.+|++|+++++++++ +
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 81 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG 81 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 4689999999999999999999999999999998765 221 124568999999999999998886 8
Q ss_pred ccEEEEcC-------------h-----------hH--HH----HHHHhCCC-CeEEEEccccee
Q 029118 164 VRSIICPS-------------E-----------GF--IS----NAGSLKGV-QHVILLSQGAVV 196 (198)
Q Consensus 164 vDaVIh~a-------------~-----------G~--ll----dAA~~~GV-kRiV~vSS~~Vy 196 (198)
+|.|||++ + ++ ++ ..+++.+. .+||++||...+
T Consensus 82 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 145 (258)
T 3a28_C 82 FDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAI 145 (258)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGT
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhc
Confidence 99999972 0 11 23 33344577 899999998654
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.43 E-value=7.8e-13 Score=109.30 Aligned_cols=77 Identities=12% Similarity=0.157 Sum_probs=63.6
Q ss_pred cccCCCCeEEEEcCCChHHHHHHHHHHHCC---CcEEEEEeCCcccccc-----cCCceEEEEccCCCHHHHHHhhc---
Q 029118 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKR---TRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTALR--- 162 (198)
Q Consensus 94 ~~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G---~~VralvR~~~~a~~~-----~g~~vevV~GDl~D~~sL~~AL~--- 162 (198)
.....++++|||||+|+||++++++|+++| ++|.++.|++++.... .+..++++.+|++|++++.++++
T Consensus 16 ~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 95 (267)
T 1sny_A 16 PRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIE 95 (267)
T ss_dssp ----CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHH
T ss_pred ccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHH
Confidence 345667899999999999999999999999 9999999987653211 13568999999999999999887
Q ss_pred ------CccEEEEc
Q 029118 163 ------GVRSIICP 170 (198)
Q Consensus 163 ------GvDaVIh~ 170 (198)
++|.|||+
T Consensus 96 ~~~g~~~id~li~~ 109 (267)
T 1sny_A 96 GVTKDQGLNVLFNN 109 (267)
T ss_dssp HHHGGGCCSEEEEC
T ss_pred HhcCCCCccEEEEC
Confidence 79999997
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.43 E-value=5.2e-14 Score=111.73 Aligned_cols=93 Identities=11% Similarity=0.110 Sum_probs=75.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc---cCCceEEEEccCCCHHHHHHhhc---CccEEEEcC--
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR---GVRSIICPS-- 171 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~---~g~~vevV~GDl~D~~sL~~AL~---GvDaVIh~a-- 171 (198)
+++|||||+|+||++++++|+++ +|+++.|++++.... .+. +++.+|++|++++.++++ ++|.|||++
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~--~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~ 76 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA--RALPADLADELEAKALLEEAGPLDLLVHAVGK 76 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC--EECCCCTTSHHHHHHHHHHHCSEEEEEECCCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC--cEEEeeCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence 57999999999999999999988 999999987554321 121 889999999999999998 899999972
Q ss_pred --h--------------------hH--HHHHHHhCCCCeEEEEccccee
Q 029118 172 --E--------------------GF--ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 172 --~--------------------G~--lldAA~~~GVkRiV~vSS~~Vy 196 (198)
. ++ +++++++++..|||++||..+|
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~ 125 (207)
T 2yut_A 77 AGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRY 125 (207)
T ss_dssp CCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHH
T ss_pred CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhc
Confidence 0 11 5677777788999999998765
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.43 E-value=7e-13 Score=110.76 Aligned_cols=100 Identities=13% Similarity=0.049 Sum_probs=80.6
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cCCceEEEEccCCCHHHHHHhhc------Cc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------GV 164 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~AL~------Gv 164 (198)
..++++|||||+|+||++++++|+++|++|.++.|++++.... .+..++++.+|++|+++++++++ ++
T Consensus 5 ~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~i 84 (252)
T 3h7a_A 5 PRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPL 84 (252)
T ss_dssp CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCc
Confidence 4567999999999999999999999999999999988654321 25678999999999999999886 67
Q ss_pred cEEEEcC------------------------hhH------HHHHHHhCCCCeEEEEccccee
Q 029118 165 RSIICPS------------------------EGF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 165 DaVIh~a------------------------~G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
|.+||++ .|. ++..+++.+..+||++||...+
T Consensus 85 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 146 (252)
T 3h7a_A 85 EVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASL 146 (252)
T ss_dssp EEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGT
T ss_pred eEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHc
Confidence 9999972 011 2344466777899999997654
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.43 E-value=7.6e-13 Score=110.31 Aligned_cols=74 Identities=14% Similarity=0.200 Sum_probs=64.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc---cccCCceEEEEccCCCHHHHHHhhc-------CccE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~---~~~g~~vevV~GDl~D~~sL~~AL~-------GvDa 166 (198)
..++++|||||+|+||++++++|+++|++|.++.|+.++.. ...+..+.++++|++|+++++++++ ++|.
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 85 (259)
T 4e6p_A 6 LEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDI 85 (259)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 45689999999999999999999999999999999876543 2235678999999999999999887 8999
Q ss_pred EEEc
Q 029118 167 IICP 170 (198)
Q Consensus 167 VIh~ 170 (198)
|||+
T Consensus 86 lv~~ 89 (259)
T 4e6p_A 86 LVNN 89 (259)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9997
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.43 E-value=7.4e-13 Score=111.06 Aligned_cols=95 Identities=17% Similarity=0.202 Sum_probs=76.0
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcC-------ccEEEE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG-------VRSIIC 169 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~G-------vDaVIh 169 (198)
..++++|||||+|+||++++++|+++|++|.++.|++++.. .+.++++|++|+++++++++. +|.|||
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-----~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~ 93 (253)
T 2nm0_A 19 HMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE-----GFLAVKCDITDTEQVEQAYKEIEETHGPVEVLIA 93 (253)
T ss_dssp -CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-----TSEEEECCTTSHHHHHHHHHHHHHHTCSCSEEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc-----cceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 45678999999999999999999999999999999876542 278999999999999888764 699998
Q ss_pred cC------------------------hhH--HH----HHHHhCCCCeEEEEccccee
Q 029118 170 PS------------------------EGF--IS----NAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 170 ~a------------------------~G~--ll----dAA~~~GVkRiV~vSS~~Vy 196 (198)
++ .++ ++ ..+++++..|||++||...+
T Consensus 94 nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~ 150 (253)
T 2nm0_A 94 NAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGL 150 (253)
T ss_dssp ECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCC
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhC
Confidence 62 011 22 33445688999999998654
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.43 E-value=7.1e-13 Score=110.87 Aligned_cols=74 Identities=12% Similarity=0.149 Sum_probs=63.1
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc---------ccCCceEEEEccCCCHHHHHHhhc-----
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---------SFGTYVESMAGDASNKKFLKTALR----- 162 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~---------~~g~~vevV~GDl~D~~sL~~AL~----- 162 (198)
..++++|||||+|+||++++++|+++|++|+++.|++++... ..+..+.++.+|++|+++++++++
T Consensus 4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (278)
T 1spx_A 4 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK 83 (278)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHH
Confidence 346789999999999999999999999999999998754321 113458899999999999999987
Q ss_pred --CccEEEEc
Q 029118 163 --GVRSIICP 170 (198)
Q Consensus 163 --GvDaVIh~ 170 (198)
++|.|||+
T Consensus 84 ~g~id~lv~~ 93 (278)
T 1spx_A 84 FGKLDILVNN 93 (278)
T ss_dssp HSCCCEEEEC
T ss_pred cCCCCEEEEC
Confidence 89999997
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=99.42 E-value=8e-13 Score=110.35 Aligned_cols=102 Identities=18% Similarity=0.101 Sum_probs=81.0
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhc------
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR------ 162 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~------ 162 (198)
....++++|||||+|+||++++++|+++|++|.++.|+.++... ..+..++++.+|++|++++.++++
T Consensus 25 ~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 104 (262)
T 3rkr_A 25 SSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAH 104 (262)
T ss_dssp CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred hccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhc
Confidence 34567899999999999999999999999999999998765422 135678999999999999998875
Q ss_pred -CccEEEEcC-h------------------------hH------HHHHHHhCCCCeEEEEccccee
Q 029118 163 -GVRSIICPS-E------------------------GF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 163 -GvDaVIh~a-~------------------------G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
.+|.|||++ . ++ ++..+++.+..+||++||...+
T Consensus 105 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~ 170 (262)
T 3rkr_A 105 GRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGK 170 (262)
T ss_dssp SCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSS
T ss_pred CCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhc
Confidence 489999972 0 11 2333456788999999998764
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.42 E-value=1.1e-12 Score=110.65 Aligned_cols=100 Identities=18% Similarity=0.249 Sum_probs=79.2
Q ss_pred cccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc-------CccE
Q 029118 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (198)
Q Consensus 94 ~~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~-------GvDa 166 (198)
+....+++||||||+|+||++++++|+++|++|.++.|+.+... ..++.+.+|++|++++.++++ .+|.
T Consensus 9 ~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~ 84 (269)
T 3vtz_A 9 MEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV----NVSDHFKIDVTNEEEVKEAVEKTTKKYGRIDI 84 (269)
T ss_dssp -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT----TSSEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc----CceeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 44667889999999999999999999999999999999876542 247889999999999998886 7899
Q ss_pred EEEcC-------------h-----------hH--H----HHHHHhCCCCeEEEEcccceec
Q 029118 167 IICPS-------------E-----------GF--I----SNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 167 VIh~a-------------~-----------G~--l----ldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
|||++ + ++ + +..+++.+..+||++||...|.
T Consensus 85 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~ 145 (269)
T 3vtz_A 85 LVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYA 145 (269)
T ss_dssp EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhcc
Confidence 99972 0 11 2 2334556888999999987653
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=99.42 E-value=1.1e-12 Score=108.84 Aligned_cols=95 Identities=14% Similarity=0.209 Sum_probs=75.0
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc-------CccEEEE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~-------GvDaVIh 169 (198)
..++++|||||+|+||++++++|+++|++|+++.|++++.... ..+.+|++|+++++++++ ++|.|||
T Consensus 13 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-----~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~ 87 (247)
T 1uzm_A 13 FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGL-----FGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVS 87 (247)
T ss_dssp CCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTS-----EEEECCTTCHHHHHHHHHHHHHHHSSCSEEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHh-----cCeeccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4567999999999999999999999999999999987654322 248899999999988875 6799999
Q ss_pred cC----h--------------------hH--HH----HHHHhCCCCeEEEEccccee
Q 029118 170 PS----E--------------------GF--IS----NAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 170 ~a----~--------------------G~--ll----dAA~~~GVkRiV~vSS~~Vy 196 (198)
++ . +. ++ ..+++++..|||++||...+
T Consensus 88 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~ 144 (247)
T 1uzm_A 88 NAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGL 144 (247)
T ss_dssp ECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhc
Confidence 72 0 11 23 33456788999999997653
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.42 E-value=6.7e-13 Score=107.43 Aligned_cols=66 Identities=20% Similarity=0.327 Sum_probs=59.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc------CccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR------GVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~------GvDaVIh~ 170 (198)
++++|||||||+||++++++|+++|++|+++.|+++ . ..++++.+|++|++++.++++ ++|.|||+
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~ 73 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G-----EDLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSA 73 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S-----SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEEC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c-----cceEEEeCCCCCHHHHHHHHHHHHhhCCceEEEEc
Confidence 468999999999999999999999999999999876 2 346899999999999999997 88999997
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.42 E-value=1.7e-12 Score=109.26 Aligned_cols=101 Identities=13% Similarity=0.090 Sum_probs=82.4
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc---cccCCceEEEEccCCCHHHHHHhhc-------Ccc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALR-------GVR 165 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~---~~~g~~vevV~GDl~D~~sL~~AL~-------GvD 165 (198)
...++++|||||+|+||++++++|+++|++|.++.|+.++.. ...+..+.++.+|++|+++++++++ ++|
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 87 (271)
T 3tzq_B 8 ELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLD 87 (271)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 345789999999999999999999999999999999886643 2235678999999999999999886 899
Q ss_pred EEEEcC----h----------------------hH--HHHHH----HhCCCCeEEEEccccee
Q 029118 166 SIICPS----E----------------------GF--ISNAG----SLKGVQHVILLSQGAVV 196 (198)
Q Consensus 166 aVIh~a----~----------------------G~--lldAA----~~~GVkRiV~vSS~~Vy 196 (198)
.+||++ . ++ +++++ ++++..+||++||...+
T Consensus 88 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~ 150 (271)
T 3tzq_B 88 IVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAH 150 (271)
T ss_dssp EEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGT
T ss_pred EEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHc
Confidence 999972 0 11 33444 67788999999998764
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.42 E-value=9.9e-13 Score=111.66 Aligned_cols=101 Identities=15% Similarity=0.165 Sum_probs=81.3
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc---cccCCceEEEEccCCCHHHHHHhhc-------Ccc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALR-------GVR 165 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~---~~~g~~vevV~GDl~D~~sL~~AL~-------GvD 165 (198)
+..++++|||||+|+||++++++|+++|++|.++.|+.+... ...+..+.++++|++|+++++++++ ++|
T Consensus 24 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 103 (277)
T 4dqx_A 24 DLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVD 103 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 456789999999999999999999999999999999876542 2245678999999999999998886 789
Q ss_pred EEEEcC------------------------hhH------HHHHHHhCCCCeEEEEccccee
Q 029118 166 SIICPS------------------------EGF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 166 aVIh~a------------------------~G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
.|||++ .|+ ++..+++.+..+||++||...+
T Consensus 104 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 164 (277)
T 4dqx_A 104 VLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTAT 164 (277)
T ss_dssp EEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGT
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhC
Confidence 999972 011 2333456677899999998765
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.41 E-value=6.2e-13 Score=110.21 Aligned_cols=97 Identities=16% Similarity=0.194 Sum_probs=76.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccccc-CCceEEEEccCCCHHHHHHhhc-------CccEEEE
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~-g~~vevV~GDl~D~~sL~~AL~-------GvDaVIh 169 (198)
.++++|||||+|+||++++++|+++|++|+++.|++++..+.. ..+++++.+|++|+++++++++ .+|.|||
T Consensus 4 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lvn 83 (245)
T 1uls_A 4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVH 83 (245)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4578999999999999999999999999999999876543211 1138899999999999998876 4899999
Q ss_pred cC-------------h-----------hH--H----HHHHHhCCCCeEEEEcccc
Q 029118 170 PS-------------E-----------GF--I----SNAGSLKGVQHVILLSQGA 194 (198)
Q Consensus 170 ~a-------------~-----------G~--l----ldAA~~~GVkRiV~vSS~~ 194 (198)
++ + +. + +..+++++..+||++||.+
T Consensus 84 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~ 138 (245)
T 1uls_A 84 YAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV 138 (245)
T ss_dssp CCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch
Confidence 72 0 11 2 3334456889999999976
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.41 E-value=1.5e-12 Score=108.68 Aligned_cols=100 Identities=16% Similarity=0.168 Sum_probs=79.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
..++++|||||+|+||++++++|+++|++|.++.|++++..+ ..+..+.++.+|++|+++++++++ +
T Consensus 4 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 83 (257)
T 3imf_A 4 MKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGR 83 (257)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 456899999999999999999999999999999998765322 134578999999999999998886 7
Q ss_pred ccEEEEcC-------------h-----------hH--HHHHH-----HhCCCCeEEEEccccee
Q 029118 164 VRSIICPS-------------E-----------GF--ISNAG-----SLKGVQHVILLSQGAVV 196 (198)
Q Consensus 164 vDaVIh~a-------------~-----------G~--lldAA-----~~~GVkRiV~vSS~~Vy 196 (198)
+|.+||++ + ++ +.+++ ++.+..+||++||...+
T Consensus 84 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 147 (257)
T 3imf_A 84 IDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAW 147 (257)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGG
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhc
Confidence 89999972 0 11 33333 44567899999997654
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.41 E-value=8.7e-13 Score=111.39 Aligned_cols=101 Identities=14% Similarity=0.161 Sum_probs=80.3
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc---ccCCceEEEEccCCCHHHHHHhhc-------Ccc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVR 165 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~---~~g~~vevV~GDl~D~~sL~~AL~-------GvD 165 (198)
+..++++|||||+|+||++++++|+++|++|.++.|+.++..+ ..+..+.++.+|++|+++++++++ ++|
T Consensus 24 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 103 (266)
T 3grp_A 24 KLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGID 103 (266)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCC
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence 4567899999999999999999999999999999998765432 245679999999999999998886 789
Q ss_pred EEEEcC------------------------hhH------HHHHHHhCCCCeEEEEccccee
Q 029118 166 SIICPS------------------------EGF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 166 aVIh~a------------------------~G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
.|||++ .+. ++..+++++..+||++||...+
T Consensus 104 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~ 164 (266)
T 3grp_A 104 ILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGV 164 (266)
T ss_dssp EEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC---
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHc
Confidence 999972 011 3444566788999999997654
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=2.3e-12 Score=108.66 Aligned_cols=101 Identities=11% Similarity=0.104 Sum_probs=79.1
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc-------cccCCceEEEEccCCCHHHHHHhhc------
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------ESFGTYVESMAGDASNKKFLKTALR------ 162 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~-------~~~g~~vevV~GDl~D~~sL~~AL~------ 162 (198)
...++++|||||+|+||++++++|+++|++|.++.|+..... ...+..+.++.+|++|++++.++++
T Consensus 26 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 105 (283)
T 1g0o_A 26 SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIF 105 (283)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 356789999999999999999999999999999999875321 1125568999999999999888764
Q ss_pred -CccEEEEcC------------------------hhH--HHHHHHhC--CCCeEEEEccccee
Q 029118 163 -GVRSIICPS------------------------EGF--ISNAGSLK--GVQHVILLSQGAVV 196 (198)
Q Consensus 163 -GvDaVIh~a------------------------~G~--lldAA~~~--GVkRiV~vSS~~Vy 196 (198)
++|.|||++ .|+ +++++... +..|||++||...+
T Consensus 106 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~ 168 (283)
T 1g0o_A 106 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQ 168 (283)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGT
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhc
Confidence 789999972 011 45565543 67899999997653
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.40 E-value=1.1e-12 Score=110.43 Aligned_cols=101 Identities=13% Similarity=0.187 Sum_probs=78.2
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-cCCceEEEEccCCCHHHHHHhhc-------CccEE
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-FGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-~g~~vevV~GDl~D~~sL~~AL~-------GvDaV 167 (198)
+..++++|||||+|+||++++++|+++|++|.++.|+.++..+. ...++.++.+|++|++++.++++ ++|.|
T Consensus 24 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l 103 (260)
T 3gem_A 24 TLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAV 103 (260)
T ss_dssp ---CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 45567899999999999999999999999999999988654221 11248899999999999998875 68999
Q ss_pred EEcC------------h-----------hH--H----HHHHHhCCCCeEEEEccccee
Q 029118 168 ICPS------------E-----------GF--I----SNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 168 Ih~a------------~-----------G~--l----ldAA~~~GVkRiV~vSS~~Vy 196 (198)
||++ + ++ + +..+++.+..+||++||...+
T Consensus 104 v~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~ 161 (260)
T 3gem_A 104 VHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTR 161 (260)
T ss_dssp EECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGG
T ss_pred EECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhc
Confidence 9972 0 11 2 333456788999999998765
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.40 E-value=1e-12 Score=109.68 Aligned_cols=100 Identities=16% Similarity=0.142 Sum_probs=77.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
..++++|||||+|+||++++++|+++|++|.++.|++++... ..+..+.++.+|++|++++.++++ +
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 84 (262)
T 1zem_A 5 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGK 84 (262)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 456799999999999999999999999999999998754321 124568899999999999888775 7
Q ss_pred ccEEEEcC--h-----------------------hH--HH----HHHHhCCCCeEEEEccccee
Q 029118 164 VRSIICPS--E-----------------------GF--IS----NAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 164 vDaVIh~a--~-----------------------G~--ll----dAA~~~GVkRiV~vSS~~Vy 196 (198)
+|.|||++ . ++ ++ ..+++++..+||++||...+
T Consensus 85 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 148 (262)
T 1zem_A 85 IDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGV 148 (262)
T ss_dssp CCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHH
T ss_pred CCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhc
Confidence 89999962 0 11 22 33445678899999997543
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.40 E-value=8.8e-13 Score=110.53 Aligned_cols=100 Identities=17% Similarity=0.191 Sum_probs=79.4
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cC-CceEEEEccCCCHHHHHHhhc------
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FG-TYVESMAGDASNKKFLKTALR------ 162 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g-~~vevV~GDl~D~~sL~~AL~------ 162 (198)
+..++++|||||+|+||++++++|+++|++|.++.|++++.... .+ ..+.++++|++|+++++++++
T Consensus 7 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 86 (262)
T 3pk0_A 7 DLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEF 86 (262)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 35678999999999999999999999999999999987653211 12 468999999999999998876
Q ss_pred -CccEEEEcC------------------------hhH--H----HHHHHhCCCCeEEEEcccce
Q 029118 163 -GVRSIICPS------------------------EGF--I----SNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 163 -GvDaVIh~a------------------------~G~--l----ldAA~~~GVkRiV~vSS~~V 195 (198)
++|.+||++ .++ + +..+++.+..+||++||...
T Consensus 87 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~ 150 (262)
T 3pk0_A 87 GGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITG 150 (262)
T ss_dssp SCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBT
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhh
Confidence 899999972 011 2 33344568899999999754
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=6.1e-13 Score=109.34 Aligned_cols=91 Identities=11% Similarity=0.149 Sum_probs=73.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcC----ccEEEEcC---
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG----VRSIICPS--- 171 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~G----vDaVIh~a--- 171 (198)
++++|||||+|+||++++++|+++|++|+++.|++++... + +.+|++|+++++++++. +|+|||++
T Consensus 1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~------~-~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~~ 73 (257)
T 1fjh_A 1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA------D-LSTAEGRKQAIADVLAKCSKGMDGLVLCAGLG 73 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC------C-TTSHHHHHHHHHHHHTTCTTCCSEEEECCCCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc------c-cccCCCCHHHHHHHHHHhCCCCCEEEECCCCC
Confidence 3689999999999999999999999999999998765432 1 67899999999999864 49999982
Q ss_pred h--------------hH--HHHH----HHhCCCCeEEEEccccee
Q 029118 172 E--------------GF--ISNA----GSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 172 ~--------------G~--lldA----A~~~GVkRiV~vSS~~Vy 196 (198)
. ++ ++++ +++.+..|||++||.+++
T Consensus 74 ~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~ 118 (257)
T 1fjh_A 74 PQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASA 118 (257)
T ss_dssp TTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGG
T ss_pred CCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhh
Confidence 1 11 3333 446788999999998776
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.39 E-value=1.4e-12 Score=109.01 Aligned_cols=101 Identities=10% Similarity=0.124 Sum_probs=81.0
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhc-------
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR------- 162 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~------- 162 (198)
+..++++|||||+|+||++++++|+++|++|.++.|+.++... ..+..+.++.+|++|+++++++++
T Consensus 9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 88 (256)
T 3gaf_A 9 HLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFG 88 (256)
T ss_dssp CCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4567899999999999999999999999999999998754321 135678999999999999998886
Q ss_pred CccEEEEcC------------h-----------hH--HHHH----HHhCCCCeEEEEccccee
Q 029118 163 GVRSIICPS------------E-----------GF--ISNA----GSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 163 GvDaVIh~a------------~-----------G~--lldA----A~~~GVkRiV~vSS~~Vy 196 (198)
++|.+||++ + ++ ++++ +++++..+||++||...+
T Consensus 89 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~ 151 (256)
T 3gaf_A 89 KITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGE 151 (256)
T ss_dssp CCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGT
T ss_pred CCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHc
Confidence 789999972 0 11 2333 456778899999998764
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.39 E-value=1.2e-12 Score=107.94 Aligned_cols=104 Identities=15% Similarity=0.158 Sum_probs=77.5
Q ss_pred ccccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEE-eCCcccc------cccCCceEEEEccCCCHHHHHHhhc---
Q 029118 93 EFPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALV-KDKRNAM------ESFGTYVESMAGDASNKKFLKTALR--- 162 (198)
Q Consensus 93 ~~~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~Vralv-R~~~~a~------~~~g~~vevV~GDl~D~~sL~~AL~--- 162 (198)
.....++++||||||+|+||++++++|+++|++|.++. |+..... ...+..+.++.+|++|+++++++++
T Consensus 7 ~~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 86 (256)
T 3ezl_A 7 HHMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVK 86 (256)
T ss_dssp ------CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHH
Confidence 34567788999999999999999999999999999988 4443321 1134568999999999999998886
Q ss_pred ----CccEEEEcC-------------h-----------hH------HHHHHHhCCCCeEEEEccccee
Q 029118 163 ----GVRSIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 163 ----GvDaVIh~a-------------~-----------G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
++|.|||++ + +. ++..+++.+..|||++||...+
T Consensus 87 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~ 154 (256)
T 3ezl_A 87 AEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQ 154 (256)
T ss_dssp HHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGG
T ss_pred HhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhc
Confidence 789999972 0 11 2444566788999999997654
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.39 E-value=6.1e-13 Score=112.71 Aligned_cols=100 Identities=17% Similarity=0.203 Sum_probs=77.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc---cC--CceEEEEccCCCHHHHHHhhc-------Cc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG--TYVESMAGDASNKKFLKTALR-------GV 164 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~---~g--~~vevV~GDl~D~~sL~~AL~-------Gv 164 (198)
..++++|||||+|+||++++++|+++|++|.++.|++++..+. .. ..+.++.+|++|+++++++++ ++
T Consensus 27 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 106 (276)
T 2b4q_A 27 LAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARL 106 (276)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCC
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 5567999999999999999999999999999999987543211 11 168899999999999988876 78
Q ss_pred cEEEEcC-------------h-----------hH------HHHHHHhCCC----CeEEEEccccee
Q 029118 165 RSIICPS-------------E-----------GF------ISNAGSLKGV----QHVILLSQGAVV 196 (198)
Q Consensus 165 DaVIh~a-------------~-----------G~------lldAA~~~GV----kRiV~vSS~~Vy 196 (198)
|.|||++ + ++ ++..+++.+. .+||++||...+
T Consensus 107 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~ 172 (276)
T 2b4q_A 107 DILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGI 172 (276)
T ss_dssp SEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGT
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHc
Confidence 9999972 0 11 2333444554 899999998765
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.39 E-value=1.2e-12 Score=110.55 Aligned_cols=98 Identities=10% Similarity=0.141 Sum_probs=77.0
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-----------cCCceEEEEccCCCHHHHHHhhc---
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----------FGTYVESMAGDASNKKFLKTALR--- 162 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-----------~g~~vevV~GDl~D~~sL~~AL~--- 162 (198)
..+++||||||+|+||++++++|+++|++|+++.|+.++.... .+..+.++.+|++|++++.++++
T Consensus 16 l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 95 (303)
T 1yxm_A 16 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL 95 (303)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHH
Confidence 4567999999999999999999999999999999987543210 24568999999999999998886
Q ss_pred ----CccEEEEcC------------------------hhH--HHHHHH----hCCCCeEEEEcccc
Q 029118 163 ----GVRSIICPS------------------------EGF--ISNAGS----LKGVQHVILLSQGA 194 (198)
Q Consensus 163 ----GvDaVIh~a------------------------~G~--lldAA~----~~GVkRiV~vSS~~ 194 (198)
.+|.|||++ .++ +++++. +.+..+||++||.+
T Consensus 96 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~ 161 (303)
T 1yxm_A 96 DTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT 161 (303)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC
T ss_pred HHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec
Confidence 589999972 011 344443 23568999999976
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.39 E-value=1.5e-12 Score=113.52 Aligned_cols=99 Identities=14% Similarity=0.193 Sum_probs=78.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc-----cc------cccCCceEEEEccCCCHHHHHHhhc----
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AM------ESFGTYVESMAGDASNKKFLKTALR---- 162 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~-----a~------~~~g~~vevV~GDl~D~~sL~~AL~---- 162 (198)
.++++|||||+|+||++++++|+++|++|++.+|+... .. ...+..+.++.+|++|++++.++++
T Consensus 4 ~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~ 83 (324)
T 3u9l_A 4 SKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIG 83 (324)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence 35789999999999999999999999999999997421 11 1124568999999999999999987
Q ss_pred ---CccEEEEcC------------------------hhH--HHHHH----HhCCCCeEEEEccccee
Q 029118 163 ---GVRSIICPS------------------------EGF--ISNAG----SLKGVQHVILLSQGAVV 196 (198)
Q Consensus 163 ---GvDaVIh~a------------------------~G~--lldAA----~~~GVkRiV~vSS~~Vy 196 (198)
++|.|||++ .|+ +++++ ++++..+||++||.+.+
T Consensus 84 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~ 150 (324)
T 3u9l_A 84 EDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSA 150 (324)
T ss_dssp HHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhc
Confidence 899999972 011 34444 67789999999997654
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=1.4e-12 Score=108.58 Aligned_cols=97 Identities=18% Similarity=0.235 Sum_probs=77.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc---ccCCceEEEEccCCCHHHHHHhhc-------CccEEEE
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~---~~g~~vevV~GDl~D~~sL~~AL~-------GvDaVIh 169 (198)
+++|||||+|+||++++++|+++|++|.++.|++++... ..+..+.++.+|++|+++++++++ ++|.|||
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvn 80 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVN 80 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence 479999999999999999999999999999998755322 224568999999999999999875 6899999
Q ss_pred cC---h----------------------hH--HHHH----HHhCCCCeEEEEccccee
Q 029118 170 PS---E----------------------GF--ISNA----GSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 170 ~a---~----------------------G~--lldA----A~~~GVkRiV~vSS~~Vy 196 (198)
++ . |+ +.++ +++.+..+||++||...+
T Consensus 81 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~ 138 (248)
T 3asu_A 81 NAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGS 138 (248)
T ss_dssp CCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGT
T ss_pred CCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhc
Confidence 62 0 11 2233 345678999999998654
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.38 E-value=4e-12 Score=106.85 Aligned_cols=101 Identities=16% Similarity=0.149 Sum_probs=79.3
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc------------cc------cccCCceEEEEccCCCHHHH
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN------------AM------ESFGTYVESMAGDASNKKFL 157 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~------------a~------~~~g~~vevV~GDl~D~~sL 157 (198)
+..++++|||||+|+||++++++|+++|++|.++.|++.. .. ...+..+.++++|++|++++
T Consensus 7 ~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 86 (281)
T 3s55_A 7 DFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAAL 86 (281)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHH
Confidence 4567899999999999999999999999999999997421 10 12346789999999999999
Q ss_pred HHhhc-------CccEEEEcC------------------------hhH--HHHH----HHhCCCCeEEEEccccee
Q 029118 158 KTALR-------GVRSIICPS------------------------EGF--ISNA----GSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 158 ~~AL~-------GvDaVIh~a------------------------~G~--lldA----A~~~GVkRiV~vSS~~Vy 196 (198)
+++++ ++|.+||++ .++ ++++ +++.+..+||++||...+
T Consensus 87 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 162 (281)
T 3s55_A 87 ESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGH 162 (281)
T ss_dssp HHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGG
T ss_pred HHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhc
Confidence 98886 899999972 011 2333 456678899999998665
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.38 E-value=2e-12 Score=111.07 Aligned_cols=102 Identities=21% Similarity=0.212 Sum_probs=80.7
Q ss_pred cccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cC-CceEEEEccCCCHHHHHHhhc----
Q 029118 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FG-TYVESMAGDASNKKFLKTALR---- 162 (198)
Q Consensus 94 ~~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g-~~vevV~GDl~D~~sL~~AL~---- 162 (198)
..+..++++|||||+|+||++++++|+++|++|.++.|+.++.... .+ ..+.++++|++|+++++++++
T Consensus 36 m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 115 (293)
T 3rih_A 36 MFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVD 115 (293)
T ss_dssp TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHH
Confidence 3456778999999999999999999999999999999987654321 12 468999999999999888775
Q ss_pred ---CccEEEEcC------------------------hhH--HHHHH----HhCCCCeEEEEcccce
Q 029118 163 ---GVRSIICPS------------------------EGF--ISNAG----SLKGVQHVILLSQGAV 195 (198)
Q Consensus 163 ---GvDaVIh~a------------------------~G~--lldAA----~~~GVkRiV~vSS~~V 195 (198)
++|.|||++ .|+ +++++ ++.+..+||++||...
T Consensus 116 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~ 181 (293)
T 3rih_A 116 AFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITG 181 (293)
T ss_dssp HHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBT
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhh
Confidence 679999972 011 34444 5678899999999764
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=1.4e-12 Score=107.85 Aligned_cols=98 Identities=14% Similarity=0.179 Sum_probs=77.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCC-cccc------cccCCceEEEEccCCCHHHHHHhhc-------Cc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAM------ESFGTYVESMAGDASNKKFLKTALR-------GV 164 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~-~~a~------~~~g~~vevV~GDl~D~~sL~~AL~-------Gv 164 (198)
++++|||||+|+||++++++|+++|++|.++.|+. +... ...+..+.++++|++|+++++++++ ++
T Consensus 4 ~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 83 (246)
T 3osu_A 4 TKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSL 83 (246)
T ss_dssp SCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 57899999999999999999999999999998754 2221 1135568899999999999998886 88
Q ss_pred cEEEEcC------------------------hhH--HHHHH----HhCCCCeEEEEccccee
Q 029118 165 RSIICPS------------------------EGF--ISNAG----SLKGVQHVILLSQGAVV 196 (198)
Q Consensus 165 DaVIh~a------------------------~G~--lldAA----~~~GVkRiV~vSS~~Vy 196 (198)
|.|||++ .++ +++++ ++++..+||++||...+
T Consensus 84 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 145 (246)
T 3osu_A 84 DVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGA 145 (246)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhc
Confidence 9999972 011 34444 66788999999997543
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.38 E-value=1.8e-12 Score=107.71 Aligned_cols=74 Identities=18% Similarity=0.240 Sum_probs=64.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc------CccEEEEc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR------GVRSIICP 170 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~------GvDaVIh~ 170 (198)
..++++|||||+|+||++++++|+++|++|.++.|+.+......+..++++.+|++|+++++++++ ++|.+||+
T Consensus 7 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~lv~n 86 (257)
T 3tl3_A 7 IRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADLGDRARFAAADVTDEAAVASALDLAETMGTLRIVVNC 86 (257)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHTCTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEEEEC
T ss_pred ecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhCCCCEEEEC
Confidence 456789999999999999999999999999999997766555567789999999999999999886 89999997
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.38 E-value=3e-12 Score=106.39 Aligned_cols=74 Identities=20% Similarity=0.192 Sum_probs=60.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc---ccCCceEEEEccCCCHHHHHHhhc-------CccE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~---~~g~~vevV~GDl~D~~sL~~AL~-------GvDa 166 (198)
..++++|||||+|+||++++++|+++|++|.++.|+++...+ ..+..++++.+|++|+++++++++ ++|.
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 84 (257)
T 3tpc_A 5 LKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHG 84 (257)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 456799999999999999999999999999999998765432 234568999999999999999886 8999
Q ss_pred EEEc
Q 029118 167 IICP 170 (198)
Q Consensus 167 VIh~ 170 (198)
+||+
T Consensus 85 lv~n 88 (257)
T 3tpc_A 85 LVNC 88 (257)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9997
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.38 E-value=2.3e-12 Score=110.41 Aligned_cols=101 Identities=18% Similarity=0.143 Sum_probs=80.0
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cCCceEEEEccCCCHHHHHHhhc-------
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------- 162 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~AL~------- 162 (198)
...++++|||||+|+||++++++|+++|++|.++.|+.++.... .+..+.++.+|++|++++.++++
T Consensus 28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 107 (301)
T 3tjr_A 28 GFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLG 107 (301)
T ss_dssp CSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCC
Confidence 46678999999999999999999999999999999987654321 24578999999999999998886
Q ss_pred CccEEEEcC-------------h-----------hH--HHHH----HHhCC-CCeEEEEccccee
Q 029118 163 GVRSIICPS-------------E-----------GF--ISNA----GSLKG-VQHVILLSQGAVV 196 (198)
Q Consensus 163 GvDaVIh~a-------------~-----------G~--lldA----A~~~G-VkRiV~vSS~~Vy 196 (198)
++|.|||++ + |. ++++ +++.+ ..+||++||...+
T Consensus 108 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~ 172 (301)
T 3tjr_A 108 GVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGL 172 (301)
T ss_dssp SCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGT
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhc
Confidence 789999972 0 11 2333 34455 6899999997654
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=99.38 E-value=1.3e-12 Score=113.16 Aligned_cols=74 Identities=16% Similarity=0.154 Sum_probs=62.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cCC--ceEEEEccCCCHHHHHHhhc------
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGT--YVESMAGDASNKKFLKTALR------ 162 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g~--~vevV~GDl~D~~sL~~AL~------ 162 (198)
..++++|||||+|+||++++++|+++|++|++++|+.++.... .+. .+.++.+|++|++++.++++
T Consensus 6 l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 85 (319)
T 3ioy_A 6 FAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF 85 (319)
T ss_dssp CTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC
Confidence 4567999999999999999999999999999999987653221 122 68999999999999999886
Q ss_pred -CccEEEEc
Q 029118 163 -GVRSIICP 170 (198)
Q Consensus 163 -GvDaVIh~ 170 (198)
++|.|||+
T Consensus 86 g~id~lv~n 94 (319)
T 3ioy_A 86 GPVSILCNN 94 (319)
T ss_dssp CCEEEEEEC
T ss_pred CCCCEEEEC
Confidence 67999997
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=2.5e-12 Score=106.22 Aligned_cols=100 Identities=13% Similarity=0.032 Sum_probs=75.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCc-EEEEEeCCcc--ccc---cc-CCceEEEEccCCCH-HHHHHhhc------
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRN--AME---SF-GTYVESMAGDASNK-KFLKTALR------ 162 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~-VralvR~~~~--a~~---~~-g~~vevV~GDl~D~-~sL~~AL~------ 162 (198)
..++++|||||+|+||++++++|+++|++ |.++.|++.. ..+ .. +..++++.+|++|+ ++++++++
T Consensus 3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (254)
T 1sby_A 3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL 82 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhc
Confidence 34678999999999999999999999997 9999998642 111 11 34688999999998 88887775
Q ss_pred -CccEEEEcC----------------hhH--HHHHHH----hCC---CCeEEEEccccee
Q 029118 163 -GVRSIICPS----------------EGF--ISNAGS----LKG---VQHVILLSQGAVV 196 (198)
Q Consensus 163 -GvDaVIh~a----------------~G~--lldAA~----~~G---VkRiV~vSS~~Vy 196 (198)
++|.|||++ .++ +++++. +.+ -.|||++||.+.+
T Consensus 83 g~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~ 142 (254)
T 1sby_A 83 KTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGF 142 (254)
T ss_dssp SCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGT
T ss_pred CCCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhc
Confidence 899999982 111 344443 222 4689999998765
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=99.38 E-value=2.2e-12 Score=109.26 Aligned_cols=100 Identities=15% Similarity=0.220 Sum_probs=77.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
..++++|||||+|+||++++++|+++|++|.++.|+.++... ..+..+.++.+|++|+++++++++ .
T Consensus 22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 101 (279)
T 3sju_A 22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGP 101 (279)
T ss_dssp ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 345789999999999999999999999999999998765321 125678999999999999988875 7
Q ss_pred ccEEEEcC------------------------hhH--HHHHH------HhCCCCeEEEEccccee
Q 029118 164 VRSIICPS------------------------EGF--ISNAG------SLKGVQHVILLSQGAVV 196 (198)
Q Consensus 164 vDaVIh~a------------------------~G~--lldAA------~~~GVkRiV~vSS~~Vy 196 (198)
+|.|||++ .|+ +++++ ++++..+||++||...+
T Consensus 102 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~ 166 (279)
T 3sju_A 102 IGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGK 166 (279)
T ss_dssp CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGT
T ss_pred CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhc
Confidence 89999972 011 33433 44677899999998654
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.37 E-value=1.8e-12 Score=106.45 Aligned_cols=100 Identities=14% Similarity=0.133 Sum_probs=78.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
..++++|||||+|+||++++++|+++|++|.++.|++++... ..+..++++.+|++|+++++++++ .
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (247)
T 3lyl_A 3 LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLA 82 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCC
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 346799999999999999999999999999999998754321 125578999999999999998875 5
Q ss_pred ccEEEEcC-------------h-----------hH--HHHH----HHhCCCCeEEEEccccee
Q 029118 164 VRSIICPS-------------E-----------GF--ISNA----GSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 164 vDaVIh~a-------------~-----------G~--lldA----A~~~GVkRiV~vSS~~Vy 196 (198)
+|.|||++ + +. ++++ .++.+..+||++||...+
T Consensus 83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~ 145 (247)
T 3lyl_A 83 IDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGS 145 (247)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHH
T ss_pred CCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhc
Confidence 79999972 0 11 2333 345677899999997543
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.37 E-value=2e-12 Score=109.81 Aligned_cols=102 Identities=12% Similarity=0.066 Sum_probs=79.1
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCC-ccccc-------ccCCceEEEEccCCCHHHHHHhhc----
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAME-------SFGTYVESMAGDASNKKFLKTALR---- 162 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~-~~a~~-------~~g~~vevV~GDl~D~~sL~~AL~---- 162 (198)
.+..++++|||||+|+||++++++|+++|++|.++.|+. +.... ..+..+.++.+|++|+++++++++
T Consensus 21 ~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 100 (281)
T 3v2h_A 21 QSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVAD 100 (281)
T ss_dssp -CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHH
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHH
Confidence 355678999999999999999999999999999999844 22211 114578999999999999998886
Q ss_pred ---CccEEEEcC------------------------hhH--HHHH----HHhCCCCeEEEEccccee
Q 029118 163 ---GVRSIICPS------------------------EGF--ISNA----GSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 163 ---GvDaVIh~a------------------------~G~--lldA----A~~~GVkRiV~vSS~~Vy 196 (198)
++|.|||++ .++ ++++ +++.+..+||++||...+
T Consensus 101 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~ 167 (281)
T 3v2h_A 101 RFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGL 167 (281)
T ss_dssp HTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred HCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccc
Confidence 789999972 011 3333 366788999999997654
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.37 E-value=1.4e-12 Score=109.96 Aligned_cols=101 Identities=17% Similarity=0.181 Sum_probs=78.1
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cCC---ceEEEEccCCCHHHHHHhhc----
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGT---YVESMAGDASNKKFLKTALR---- 162 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g~---~vevV~GDl~D~~sL~~AL~---- 162 (198)
+..++++|||||+|+||++++++|+++|++|.++.|++++.... .+. .++++.+|++|++++.++++
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 87 (281)
T 3svt_A 8 SFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTA 87 (281)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 34578999999999999999999999999999999987643211 122 68999999999999998886
Q ss_pred ---CccEEEEcC-------------------------hhH--HHHH----HHhCCCCeEEEEccccee
Q 029118 163 ---GVRSIICPS-------------------------EGF--ISNA----GSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 163 ---GvDaVIh~a-------------------------~G~--lldA----A~~~GVkRiV~vSS~~Vy 196 (198)
.+|.|||++ .|+ ++++ .++.+-.+||++||...+
T Consensus 88 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 155 (281)
T 3svt_A 88 WHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAAS 155 (281)
T ss_dssp HHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHH
T ss_pred HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHc
Confidence 679999972 011 2333 345566799999997654
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=99.37 E-value=1.3e-12 Score=108.59 Aligned_cols=100 Identities=18% Similarity=0.228 Sum_probs=79.4
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc---cccCCceEEEEccCCCHHHHHHhhc-------Ccc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALR-------GVR 165 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~---~~~g~~vevV~GDl~D~~sL~~AL~-------GvD 165 (198)
+..++++|||||+|+||++++++|+++|++|.++.|+++... ...+..+..+++|++|+++++++++ ++|
T Consensus 6 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 85 (248)
T 3op4_A 6 NLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVD 85 (248)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCC
Confidence 356789999999999999999999999999999999876542 2234457899999999999999886 899
Q ss_pred EEEEcC------------------------hhH--HHHH----HHhCCCCeEEEEcccce
Q 029118 166 SIICPS------------------------EGF--ISNA----GSLKGVQHVILLSQGAV 195 (198)
Q Consensus 166 aVIh~a------------------------~G~--lldA----A~~~GVkRiV~vSS~~V 195 (198)
.+||++ .++ +.++ +++++..+||++||...
T Consensus 86 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~ 145 (248)
T 3op4_A 86 ILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVG 145 (248)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhh
Confidence 999972 011 2333 44567889999999754
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.37 E-value=2.9e-12 Score=104.54 Aligned_cols=72 Identities=8% Similarity=0.111 Sum_probs=61.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc---cccCCceEEEEccCCCHHHHHHhhcCc----cEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALRGV----RSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~---~~~g~~vevV~GDl~D~~sL~~AL~Gv----DaVIh~ 170 (198)
++++|||||+|+||++++++|+++|++|.++.|++++.. ...+..+.++.+|++|+++++++++.+ |.|||+
T Consensus 1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~~ 79 (230)
T 3guy_A 1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVHS 79 (230)
T ss_dssp --CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEEC
T ss_pred CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEEe
Confidence 467999999999999999999999999999999876543 223567899999999999999999776 899987
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=1.3e-12 Score=109.50 Aligned_cols=99 Identities=15% Similarity=0.245 Sum_probs=77.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEE-EeCCccccc------ccCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~Vral-vR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
.++++|||||+|+||++++++|+++|++|.++ .|+.+...+ ..+..+.++.+|++|+++++++++ .
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 82 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR 82 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 35789999999999999999999999999997 676544321 135578999999999999998875 5
Q ss_pred ccEEEEcC------------------------hhH--H----HHHHHhCCCCeEEEEccccee
Q 029118 164 VRSIICPS------------------------EGF--I----SNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 164 vDaVIh~a------------------------~G~--l----ldAA~~~GVkRiV~vSS~~Vy 196 (198)
+|.|||++ .++ + +..+++.+..+||++||.+.+
T Consensus 83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~ 145 (258)
T 3oid_A 83 LDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSI 145 (258)
T ss_dssp CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGT
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhC
Confidence 69999972 011 2 333466788899999998764
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.36 E-value=7.3e-12 Score=105.56 Aligned_cols=100 Identities=12% Similarity=0.151 Sum_probs=79.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc-------------ccCCceEEEEccCCCHHHHHHhhc-
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------------SFGTYVESMAGDASNKKFLKTALR- 162 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~-------------~~g~~vevV~GDl~D~~sL~~AL~- 162 (198)
..++++|||||+|.||++++++|+++|++|.++.|+.++... ..+..+.++.+|++|+++++++++
T Consensus 4 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 83 (274)
T 3e03_A 4 LSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAA 83 (274)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHH
Confidence 457899999999999999999999999999999998754211 125578899999999999988875
Q ss_pred ------CccEEEEcC-------------h-----------hH------HHHHHHhCCCCeEEEEccccee
Q 029118 163 ------GVRSIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 163 ------GvDaVIh~a-------------~-----------G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
++|.+||++ + +. ++..+++.+..+||++||...+
T Consensus 84 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~ 153 (274)
T 3e03_A 84 TVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSL 153 (274)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCC
T ss_pred HHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhc
Confidence 789999972 0 11 2333456778899999997654
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.36 E-value=2.1e-12 Score=106.99 Aligned_cols=99 Identities=14% Similarity=0.173 Sum_probs=78.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc-------cccCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------ESFGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~-------~~~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
.++++|||||+|+||++++++|+++|++|.++.|+..... ...+..++++++|++|++++.++++ +
T Consensus 6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 85 (264)
T 3i4f_A 6 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGK 85 (264)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred ccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 4678999999999999999999999999999988764321 1124568999999999999999886 8
Q ss_pred ccEEEEcCh--------------------------hH--HHHHH----HhCCCCeEEEEccccee
Q 029118 164 VRSIICPSE--------------------------GF--ISNAG----SLKGVQHVILLSQGAVV 196 (198)
Q Consensus 164 vDaVIh~a~--------------------------G~--lldAA----~~~GVkRiV~vSS~~Vy 196 (198)
+|.|||++. ++ +++++ ++.+..+||++||.+++
T Consensus 86 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~ 150 (264)
T 3i4f_A 86 IDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGAD 150 (264)
T ss_dssp CCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGG
T ss_pred CCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhc
Confidence 899998720 11 33443 67788999999998543
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=2.1e-12 Score=107.87 Aligned_cols=74 Identities=15% Similarity=0.172 Sum_probs=61.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEe-CCcccccc---c----CCceEEEEccCCCH----HHHHHhhc--
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK-DKRNAMES---F----GTYVESMAGDASNK----KFLKTALR-- 162 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR-~~~~a~~~---~----g~~vevV~GDl~D~----~sL~~AL~-- 162 (198)
..++++|||||+|+||++++++|+++|++|.++.| ++++.... . +..+.++.+|++|+ ++++++++
T Consensus 9 ~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 88 (276)
T 1mxh_A 9 SECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCS 88 (276)
T ss_dssp --CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHH
Confidence 34578999999999999999999999999999999 65443211 1 55689999999999 88888876
Q ss_pred -----CccEEEEc
Q 029118 163 -----GVRSIICP 170 (198)
Q Consensus 163 -----GvDaVIh~ 170 (198)
++|.|||+
T Consensus 89 ~~~~g~id~lv~n 101 (276)
T 1mxh_A 89 FRAFGRCDVLVNN 101 (276)
T ss_dssp HHHHSCCCEEEEC
T ss_pred HHhcCCCCEEEEC
Confidence 78999997
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.36 E-value=2.5e-12 Score=107.96 Aligned_cols=76 Identities=18% Similarity=0.204 Sum_probs=65.4
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc-------ccCCceEEEEccCCCHHHHHHhhc-----
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------SFGTYVESMAGDASNKKFLKTALR----- 162 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~-------~~g~~vevV~GDl~D~~sL~~AL~----- 162 (198)
....++++|||||+|+||++++++|+++|++|.++.|+.++... ..+..+.++++|++|+++++++++
T Consensus 16 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 95 (266)
T 4egf_A 16 LRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEA 95 (266)
T ss_dssp GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 35677899999999999999999999999999999998765321 135679999999999999988875
Q ss_pred --CccEEEEc
Q 029118 163 --GVRSIICP 170 (198)
Q Consensus 163 --GvDaVIh~ 170 (198)
++|.+||+
T Consensus 96 ~g~id~lv~n 105 (266)
T 4egf_A 96 FGGLDVLVNN 105 (266)
T ss_dssp HTSCSEEEEE
T ss_pred cCCCCEEEEC
Confidence 88999997
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.36 E-value=1.8e-12 Score=109.16 Aligned_cols=74 Identities=12% Similarity=0.216 Sum_probs=62.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cCC---ceEEEEccCCCHHHHHHhhc-----
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGT---YVESMAGDASNKKFLKTALR----- 162 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g~---~vevV~GDl~D~~sL~~AL~----- 162 (198)
..++++|||||+|+||++++++|+++|++|.++.|++++..+. .+. .++++.+|++|+++++++++
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (280)
T 1xkq_A 4 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ 83 (280)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHh
Confidence 4567899999999999999999999999999999987543221 122 68999999999999998876
Q ss_pred --CccEEEEc
Q 029118 163 --GVRSIICP 170 (198)
Q Consensus 163 --GvDaVIh~ 170 (198)
++|.|||+
T Consensus 84 ~g~iD~lv~n 93 (280)
T 1xkq_A 84 FGKIDVLVNN 93 (280)
T ss_dssp HSCCCEEEEC
T ss_pred cCCCCEEEEC
Confidence 78999997
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.36 E-value=2.5e-12 Score=107.80 Aligned_cols=100 Identities=16% Similarity=0.179 Sum_probs=79.6
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------c--CCceEEEEccCCCHHHHHHhhc---Ccc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------F--GTYVESMAGDASNKKFLKTALR---GVR 165 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~--g~~vevV~GDl~D~~sL~~AL~---GvD 165 (198)
..++++|||||+|+||++++++|+++|++|.++.|+.+...+. . +..+..+.+|++|++.++++++ ++|
T Consensus 8 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id 87 (267)
T 3t4x_A 8 LKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVD 87 (267)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCS
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCC
Confidence 4567999999999999999999999999999999987543211 1 3457889999999999988876 789
Q ss_pred EEEEcC-------------h-----------hH------HHHHHHhCCCCeEEEEccccee
Q 029118 166 SIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 166 aVIh~a-------------~-----------G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
.+||++ + +. ++..+++++..+||++||...+
T Consensus 88 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 148 (267)
T 3t4x_A 88 ILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAI 148 (267)
T ss_dssp EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGT
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhc
Confidence 999972 0 11 3445566788999999998765
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.36 E-value=2.5e-12 Score=109.00 Aligned_cols=99 Identities=11% Similarity=0.143 Sum_probs=79.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhc-------Cc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GV 164 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~-------Gv 164 (198)
.++++|||||+|+||++++++|+++|++|.++.|+.++... ..+..+.++.+|++|+++++++++ ++
T Consensus 3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 82 (264)
T 3tfo_A 3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRI 82 (264)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 35789999999999999999999999999999998765321 125568899999999999988875 78
Q ss_pred cEEEEcC------------------------hhH------HHHHHHhCCCCeEEEEccccee
Q 029118 165 RSIICPS------------------------EGF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 165 DaVIh~a------------------------~G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
|.+||++ .|. ++..+++.+..+||++||.+.+
T Consensus 83 D~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~ 144 (264)
T 3tfo_A 83 DVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGAL 144 (264)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHc
Confidence 9999972 011 2344456678999999998664
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=1.8e-12 Score=107.82 Aligned_cols=101 Identities=19% Similarity=0.268 Sum_probs=80.4
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc---ccCCceEEEEccCCCHHHHHHhhc-------Ccc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVR 165 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~---~~g~~vevV~GDl~D~~sL~~AL~-------GvD 165 (198)
...++++|||||+|+||++++++|+++|++|.++.|++++..+ ..+..+.++.+|++|+++++++++ ++|
T Consensus 3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 82 (247)
T 3rwb_A 3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGID 82 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCC
Confidence 3567899999999999999999999999999999998765432 235678999999999999998886 789
Q ss_pred EEEEcC------------------------hhH--HHH----HHHhCC-CCeEEEEccccee
Q 029118 166 SIICPS------------------------EGF--ISN----AGSLKG-VQHVILLSQGAVV 196 (198)
Q Consensus 166 aVIh~a------------------------~G~--lld----AA~~~G-VkRiV~vSS~~Vy 196 (198)
.+||++ .+. +.+ .+++++ ..+||++||...+
T Consensus 83 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 144 (247)
T 3rwb_A 83 ILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFF 144 (247)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHH
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhc
Confidence 999972 011 233 355555 7899999997543
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.36 E-value=1.3e-12 Score=110.55 Aligned_cols=101 Identities=17% Similarity=0.187 Sum_probs=80.9
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhc-------
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR------- 162 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~------- 162 (198)
+..++++|||||+|+||++++++|+++|++|.++.|++++..+ ..+..++++.+|++|++++.++++
T Consensus 23 ~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 102 (271)
T 4ibo_A 23 DLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGI 102 (271)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence 4667899999999999999999999999999999998765321 135678999999999999999886
Q ss_pred CccEEEEcC------------------------hhH--H----HHHHHhCCCCeEEEEccccee
Q 029118 163 GVRSIICPS------------------------EGF--I----SNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 163 GvDaVIh~a------------------------~G~--l----ldAA~~~GVkRiV~vSS~~Vy 196 (198)
++|.|||++ .++ + +..+++.+..+||++||...+
T Consensus 103 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~ 166 (271)
T 4ibo_A 103 DVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSE 166 (271)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred CCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhC
Confidence 789999972 011 2 344455677899999997653
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=99.36 E-value=2.6e-12 Score=107.70 Aligned_cols=100 Identities=15% Similarity=0.122 Sum_probs=78.9
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc-------cccCCceEEEEccCCCHHHHHHhhc------
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------ESFGTYVESMAGDASNKKFLKTALR------ 162 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~-------~~~g~~vevV~GDl~D~~sL~~AL~------ 162 (198)
+..++++|||||+|+||++++++|+++|++|.++.|+..... ...+..+.++.+|++|++++.++++
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 105 (271)
T 4iin_A 26 QFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSD 105 (271)
T ss_dssp CCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence 345679999999999999999999999999999999653321 1234578999999999999998886
Q ss_pred -CccEEEEcC-------------h-----------hH------HHHHHHhCCCCeEEEEcccce
Q 029118 163 -GVRSIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 163 -GvDaVIh~a-------------~-----------G~------lldAA~~~GVkRiV~vSS~~V 195 (198)
++|.|||++ + +. ++..+++.+..+||++||...
T Consensus 106 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~ 169 (271)
T 4iin_A 106 GGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIG 169 (271)
T ss_dssp SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHH
T ss_pred CCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhh
Confidence 789999972 0 11 234445668899999999754
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.36 E-value=3e-12 Score=108.87 Aligned_cols=100 Identities=19% Similarity=0.157 Sum_probs=80.1
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc---cccCCceEEEEccCCCHHHHHHhhc-------CccE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~---~~~g~~vevV~GDl~D~~sL~~AL~-------GvDa 166 (198)
..++++|||||+|+||++++++|+++|++|.++.|+.+... ...+..+.++.+|++|+++++++++ ++|.
T Consensus 27 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 106 (277)
T 3gvc_A 27 LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDK 106 (277)
T ss_dssp CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 45789999999999999999999999999999999876543 2235678999999999999988875 7899
Q ss_pred EEEcC------------------------hhH------HHHHHHhCCCCeEEEEccccee
Q 029118 167 IICPS------------------------EGF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 167 VIh~a------------------------~G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
|||++ .++ ++..+++.+..+||++||...+
T Consensus 107 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~ 166 (277)
T 3gvc_A 107 LVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQ 166 (277)
T ss_dssp EEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGT
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhc
Confidence 99972 011 2333455778899999997654
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.35 E-value=3.6e-12 Score=108.49 Aligned_cols=100 Identities=18% Similarity=0.276 Sum_probs=79.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
..++++|||||+|+||++++++|+++|++|.++.|+.++..+ ..+..+.++++|++|+++++++++ +
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 105 (283)
T 3v8b_A 26 QPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGH 105 (283)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 456789999999999999999999999999999998754321 124568999999999999988886 7
Q ss_pred ccEEEEcC-------------------------hhH--HHHHH----HhCCCCeEEEEccccee
Q 029118 164 VRSIICPS-------------------------EGF--ISNAG----SLKGVQHVILLSQGAVV 196 (198)
Q Consensus 164 vDaVIh~a-------------------------~G~--lldAA----~~~GVkRiV~vSS~~Vy 196 (198)
+|.+||++ .|+ +++++ ++.+..+||++||.+.+
T Consensus 106 iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~ 169 (283)
T 3v8b_A 106 LDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGT 169 (283)
T ss_dssp CCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTT
T ss_pred CCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhc
Confidence 89999972 011 33443 66788999999997654
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.35 E-value=4.1e-12 Score=108.80 Aligned_cols=100 Identities=8% Similarity=0.131 Sum_probs=78.4
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cCC---ceEEEEccCCCHHHHHHhhc----
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGT---YVESMAGDASNKKFLKTALR---- 162 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g~---~vevV~GDl~D~~sL~~AL~---- 162 (198)
...++++|||||+|+||++++++|+++|++|.++.|++++.... .+. .+.++.+|++|+++++++++
T Consensus 23 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 102 (297)
T 1xhl_A 23 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA 102 (297)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHH
Confidence 35568999999999999999999999999999999987543211 123 68999999999999998886
Q ss_pred ---CccEEEEcC------h--------------------hH--H----HHHHHhCCCCeEEEEccccee
Q 029118 163 ---GVRSIICPS------E--------------------GF--I----SNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 163 ---GvDaVIh~a------~--------------------G~--l----ldAA~~~GVkRiV~vSS~~Vy 196 (198)
++|.|||++ . ++ + +..+++.+ .+||++||...+
T Consensus 103 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~ 170 (297)
T 1xhl_A 103 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAG 170 (297)
T ss_dssp HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGS
T ss_pred hcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhc
Confidence 789999972 0 00 2 33344566 899999998765
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.35 E-value=4.6e-12 Score=107.55 Aligned_cols=100 Identities=15% Similarity=0.250 Sum_probs=78.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc-------------cccCCceEEEEccCCCHHHHHHhhc-
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------------ESFGTYVESMAGDASNKKFLKTALR- 162 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~-------------~~~g~~vevV~GDl~D~~sL~~AL~- 162 (198)
..++++|||||+|.||++++++|+++|++|.++.|+.++.. ...+..+.++++|++|+++++++++
T Consensus 7 l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 86 (285)
T 3sc4_A 7 LRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAK 86 (285)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence 45679999999999999999999999999999999876321 1124678999999999999998886
Q ss_pred ------CccEEEEcC-------------h-----------hH--HHHHH----HhCCCCeEEEEccccee
Q 029118 163 ------GVRSIICPS-------------E-----------GF--ISNAG----SLKGVQHVILLSQGAVV 196 (198)
Q Consensus 163 ------GvDaVIh~a-------------~-----------G~--lldAA----~~~GVkRiV~vSS~~Vy 196 (198)
.+|.+||++ + +. +.+++ ++.+..+||++||...+
T Consensus 87 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~ 156 (285)
T 3sc4_A 87 TVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRL 156 (285)
T ss_dssp HHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCC
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhc
Confidence 899999972 0 11 33433 34577899999997553
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=5.5e-12 Score=102.81 Aligned_cols=72 Identities=13% Similarity=0.106 Sum_probs=63.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc-------ccCCceEEEEccCCCHHHHHHhhc-------Cc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------SFGTYVESMAGDASNKKFLKTALR-------GV 164 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~-------~~g~~vevV~GDl~D~~sL~~AL~-------Gv 164 (198)
++++|||||+|+||++++++|+++|++|.++.|+.++... ..+..+.++.+|++|++++.++++ ++
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 81 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDV 81 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence 5789999999999999999999999999999998764321 235678999999999999999987 78
Q ss_pred cEEEEc
Q 029118 165 RSIICP 170 (198)
Q Consensus 165 DaVIh~ 170 (198)
|.+||+
T Consensus 82 d~li~~ 87 (235)
T 3l77_A 82 DVVVAN 87 (235)
T ss_dssp SEEEEC
T ss_pred CEEEEC
Confidence 999997
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=99.35 E-value=2.5e-12 Score=108.36 Aligned_cols=75 Identities=17% Similarity=0.263 Sum_probs=63.3
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cC-CceEEEEccCCCHHHHHHhhc------
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FG-TYVESMAGDASNKKFLKTALR------ 162 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g-~~vevV~GDl~D~~sL~~AL~------ 162 (198)
...++++|||||+|+||++++++|+++|++|.+++|++++.... .+ ..++++.+|++|++++.++++
T Consensus 25 ~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 104 (286)
T 1xu9_A 25 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM 104 (286)
T ss_dssp GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred hcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 35678999999999999999999999999999999987653221 12 368999999999999988875
Q ss_pred -CccEEEEc
Q 029118 163 -GVRSIICP 170 (198)
Q Consensus 163 -GvDaVIh~ 170 (198)
++|.|||+
T Consensus 105 g~iD~li~n 113 (286)
T 1xu9_A 105 GGLDMLILN 113 (286)
T ss_dssp TSCSEEEEC
T ss_pred CCCCEEEEC
Confidence 79999987
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.35 E-value=4.7e-12 Score=107.38 Aligned_cols=101 Identities=13% Similarity=0.082 Sum_probs=80.7
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cCCceEEEEccCCCHHHHHHhhc------C
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------G 163 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~AL~------G 163 (198)
+..++++|||||+|+||++++++|+++|++|.++.|++++.... .+..+.++.+|++|++++.++++ +
T Consensus 30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~ 109 (275)
T 4imr_A 30 GLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAP 109 (275)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 35678999999999999999999999999999999988654321 25678999999999999988886 7
Q ss_pred ccEEEEcC-------------h-----------hH--HHHH----HHhCCCCeEEEEccccee
Q 029118 164 VRSIICPS-------------E-----------GF--ISNA----GSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 164 vDaVIh~a-------------~-----------G~--lldA----A~~~GVkRiV~vSS~~Vy 196 (198)
+|.+||++ + |. ++++ +++.+..+||++||...+
T Consensus 110 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~ 172 (275)
T 4imr_A 110 VDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQL 172 (275)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhC
Confidence 89999972 0 11 2333 456678899999998664
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.34 E-value=3.3e-12 Score=106.74 Aligned_cols=75 Identities=16% Similarity=0.135 Sum_probs=60.8
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc-------ccCCceEEEEccCCCH-HHHHHhhc-----
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------SFGTYVESMAGDASNK-KFLKTALR----- 162 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~-------~~g~~vevV~GDl~D~-~sL~~AL~----- 162 (198)
...++++|||||+|+||++++++|+++|++|.+++|+.++..+ ..+..++++.+|++|+ ++++++++
T Consensus 9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~ 88 (311)
T 3o26_A 9 VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTH 88 (311)
T ss_dssp ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred cCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence 3457799999999999999999999999999999998765321 1234689999999998 77776664
Q ss_pred --CccEEEEc
Q 029118 163 --GVRSIICP 170 (198)
Q Consensus 163 --GvDaVIh~ 170 (198)
++|.|||+
T Consensus 89 ~g~iD~lv~n 98 (311)
T 3o26_A 89 FGKLDILVNN 98 (311)
T ss_dssp HSSCCEEEEC
T ss_pred CCCCCEEEEC
Confidence 89999997
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.34 E-value=2e-12 Score=109.67 Aligned_cols=97 Identities=13% Similarity=0.159 Sum_probs=77.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc---cC--CceEEEEccCCCHHHHHHhhcCc-------cEE
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG--TYVESMAGDASNKKFLKTALRGV-------RSI 167 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~---~g--~~vevV~GDl~D~~sL~~AL~Gv-------DaV 167 (198)
+++|||||+|+||++++++|+++|++|.++.|++++.... .. ..+.++.+|++|+++++++++.+ |.|
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 101 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGL 101 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEE
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 6899999999999999999999999999999987543221 11 36889999999999999998654 999
Q ss_pred EEcC----h---------------------hH------HHHHHHhCCCC-eEEEEccccee
Q 029118 168 ICPS----E---------------------GF------ISNAGSLKGVQ-HVILLSQGAVV 196 (198)
Q Consensus 168 Ih~a----~---------------------G~------lldAA~~~GVk-RiV~vSS~~Vy 196 (198)
||++ . |. ++..+++.+.. +||++||...+
T Consensus 102 vnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~ 162 (272)
T 2nwq_A 102 INNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGK 162 (272)
T ss_dssp EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGT
T ss_pred EECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhc
Confidence 9972 0 11 34445566778 99999998664
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.34 E-value=5.5e-12 Score=105.56 Aligned_cols=74 Identities=9% Similarity=0.112 Sum_probs=63.8
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
..++++|||||+|+||++++++|+++|++|.++.|+.++..+ ..+..+.++++|++|+++++++++ .
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 88 (264)
T 3ucx_A 9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGR 88 (264)
T ss_dssp TTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 457899999999999999999999999999999998764321 125578999999999999998885 7
Q ss_pred ccEEEEc
Q 029118 164 VRSIICP 170 (198)
Q Consensus 164 vDaVIh~ 170 (198)
+|.+||+
T Consensus 89 id~lv~n 95 (264)
T 3ucx_A 89 VDVVINN 95 (264)
T ss_dssp CSEEEEC
T ss_pred CcEEEEC
Confidence 8999997
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=4.7e-12 Score=106.88 Aligned_cols=100 Identities=14% Similarity=0.148 Sum_probs=77.8
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCc-ccc------cccCCceEEEEccCCCHHHHHHhhc------
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-NAM------ESFGTYVESMAGDASNKKFLKTALR------ 162 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~-~a~------~~~g~~vevV~GDl~D~~sL~~AL~------ 162 (198)
...++++|||||+|+||++++++|+++|++|.++.|+.. ... ...+..+.++.+|++|+++++++++
T Consensus 25 ~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~ 104 (269)
T 4dmm_A 25 PLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERW 104 (269)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 345678999999999999999999999999999998542 221 1234578999999999999998886
Q ss_pred -CccEEEEcC-------------h-----------hH--HHH----HHHhCCCCeEEEEcccce
Q 029118 163 -GVRSIICPS-------------E-----------GF--ISN----AGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 163 -GvDaVIh~a-------------~-----------G~--lld----AA~~~GVkRiV~vSS~~V 195 (198)
++|.|||++ + |+ +++ .+++.+..+||++||...
T Consensus 105 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~ 168 (269)
T 4dmm_A 105 GRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVG 168 (269)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhh
Confidence 789999972 0 11 233 345667889999999754
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.34 E-value=4e-12 Score=105.78 Aligned_cols=100 Identities=12% Similarity=0.142 Sum_probs=77.6
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cCCceEEEEccCCCHHHHHHhhc--------
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------- 162 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~AL~-------- 162 (198)
..++++|||||+|+||++++++|+++|++|.++.|++++.... .+..+.++.+|++|+++++++++
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g 82 (260)
T 2qq5_A 3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQG 82 (260)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 3467899999999999999999999999999999987543211 14568899999999999887764
Q ss_pred CccEEEEcC---h----------------------------hH------HHHHHHhCCCCeEEEEccccee
Q 029118 163 GVRSIICPS---E----------------------------GF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 163 GvDaVIh~a---~----------------------------G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
.+|.|||++ . +. ++..+++++..|||++||.+.+
T Consensus 83 ~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 153 (260)
T 2qq5_A 83 RLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSL 153 (260)
T ss_dssp CCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGT
T ss_pred CceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhc
Confidence 469999874 0 01 1233446678999999998654
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.34 E-value=4.9e-12 Score=107.32 Aligned_cols=76 Identities=14% Similarity=0.255 Sum_probs=65.6
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhc------
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR------ 162 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~------ 162 (198)
.+..++++|||||+|+||++++++|+++|++|.++.|+.+.... ..+..+.++++|++|+++++++++
T Consensus 28 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 107 (276)
T 3r1i_A 28 FDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGEL 107 (276)
T ss_dssp GCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 34667899999999999999999999999999999998765432 124578999999999999999887
Q ss_pred -CccEEEEc
Q 029118 163 -GVRSIICP 170 (198)
Q Consensus 163 -GvDaVIh~ 170 (198)
++|.|||+
T Consensus 108 g~iD~lvnn 116 (276)
T 3r1i_A 108 GGIDIAVCN 116 (276)
T ss_dssp SCCSEEEEC
T ss_pred CCCCEEEEC
Confidence 89999997
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.34 E-value=4.8e-12 Score=106.46 Aligned_cols=100 Identities=16% Similarity=0.197 Sum_probs=77.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc---ccCCceEEEEccCCCHHHHHHhhc-------CccE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~---~~g~~vevV~GDl~D~~sL~~AL~-------GvDa 166 (198)
..++++|||||+|+||++++++|+++|++|.++.|++++..+ .....+.++.+|++|+++++++++ .+|.
T Consensus 4 l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~ 83 (263)
T 2a4k_A 4 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG 83 (263)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcE
Confidence 356789999999999999999999999999999998765322 223468899999999999998876 4699
Q ss_pred EEEcC-------------h-----------hH--HHHHHHhC--CCCeEEEEccccee
Q 029118 167 IICPS-------------E-----------GF--ISNAGSLK--GVQHVILLSQGAVV 196 (198)
Q Consensus 167 VIh~a-------------~-----------G~--lldAA~~~--GVkRiV~vSS~~Vy 196 (198)
|||++ + ++ +++++... ...+||++||...+
T Consensus 84 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~ 141 (263)
T 2a4k_A 84 VAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL 141 (263)
T ss_dssp EEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc
Confidence 99972 0 11 34444332 15699999998765
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.33 E-value=3.2e-12 Score=105.67 Aligned_cols=72 Identities=13% Similarity=0.233 Sum_probs=61.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc---ccCCceEEEEccCCCHHHHHHhhc-------CccEEE
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSII 168 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~---~~g~~vevV~GDl~D~~sL~~AL~-------GvDaVI 168 (198)
++++|||||+|+||++++++|+++|++|.++.|+.++..+ ..+..+.++.+|++|+++++++++ .+|.+|
T Consensus 3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv 82 (235)
T 3l6e_A 3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELVL 82 (235)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEEE
Confidence 5789999999999999999999999999999998765432 223468999999999999988875 679999
Q ss_pred Ec
Q 029118 169 CP 170 (198)
Q Consensus 169 h~ 170 (198)
|+
T Consensus 83 nn 84 (235)
T 3l6e_A 83 HC 84 (235)
T ss_dssp EE
T ss_pred EC
Confidence 97
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.33 E-value=1e-11 Score=103.97 Aligned_cols=101 Identities=16% Similarity=0.233 Sum_probs=77.5
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCc------------ccc------cccCCceEEEEccCCCHHHH
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR------------NAM------ESFGTYVESMAGDASNKKFL 157 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~------------~a~------~~~g~~vevV~GDl~D~~sL 157 (198)
...++++|||||+|+||++++++|+++|++|.++.|+.. ... ...+..+.++++|++|++++
T Consensus 10 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v 89 (278)
T 3sx2_A 10 PLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESL 89 (278)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHH
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHH
Confidence 456789999999999999999999999999999998732 111 11346789999999999999
Q ss_pred HHhhc-------CccEEEEcC---------h-----------hH--HHHH----HHhCC-CCeEEEEccccee
Q 029118 158 KTALR-------GVRSIICPS---------E-----------GF--ISNA----GSLKG-VQHVILLSQGAVV 196 (198)
Q Consensus 158 ~~AL~-------GvDaVIh~a---------~-----------G~--lldA----A~~~G-VkRiV~vSS~~Vy 196 (198)
+++++ ++|.|||++ + ++ ++++ +++++ -.+||++||...+
T Consensus 90 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~ 162 (278)
T 3sx2_A 90 SAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGL 162 (278)
T ss_dssp HHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGT
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhc
Confidence 99886 889999982 0 11 3333 33433 6799999997654
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=8.9e-12 Score=106.26 Aligned_cols=101 Identities=19% Similarity=0.260 Sum_probs=79.1
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc-------cccCCceEEEEccCCCHHHHHHhhc------
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------ESFGTYVESMAGDASNKKFLKTALR------ 162 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~-------~~~g~~vevV~GDl~D~~sL~~AL~------ 162 (198)
+..++++|||||+|+||++++++|+++|++|.++.|+.+... ...+..+.++++|++|+++++++++
T Consensus 44 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 123 (291)
T 3ijr_A 44 KLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQL 123 (291)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 456789999999999999999999999999999999875321 1235678999999999999998886
Q ss_pred -CccEEEEcC-----h--------------------hH--HHHHHHhC--CCCeEEEEccccee
Q 029118 163 -GVRSIICPS-----E--------------------GF--ISNAGSLK--GVQHVILLSQGAVV 196 (198)
Q Consensus 163 -GvDaVIh~a-----~--------------------G~--lldAA~~~--GVkRiV~vSS~~Vy 196 (198)
.+|.+||++ . ++ +++++... .-.+||++||...+
T Consensus 124 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~ 187 (291)
T 3ijr_A 124 GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAY 187 (291)
T ss_dssp SSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHH
T ss_pred CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhc
Confidence 789999972 0 11 45555443 34599999998654
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.33 E-value=5.5e-12 Score=104.31 Aligned_cols=74 Identities=18% Similarity=0.212 Sum_probs=64.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc---cccCCceEEEEccCCCHHHHHHhhc-------CccE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~---~~~g~~vevV~GDl~D~~sL~~AL~-------GvDa 166 (198)
..++++|||||+|+||++++++|+++|++|.++.|++++.. ...+..+.++.+|++|+++++++++ .+|.
T Consensus 7 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 86 (261)
T 3n74_A 7 LEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDI 86 (261)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence 45679999999999999999999999999999999876543 2345678999999999999998886 7899
Q ss_pred EEEc
Q 029118 167 IICP 170 (198)
Q Consensus 167 VIh~ 170 (198)
|||+
T Consensus 87 li~~ 90 (261)
T 3n74_A 87 LVNN 90 (261)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9997
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.33 E-value=5e-12 Score=107.25 Aligned_cols=75 Identities=12% Similarity=0.174 Sum_probs=63.5
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc---cccCCceEEEEccCCCHHHHHHhhc-------Ccc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALR-------GVR 165 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~---~~~g~~vevV~GDl~D~~sL~~AL~-------GvD 165 (198)
...++++|||||+|+||++++++|+++|++|.++.|+.++.. ...+..+.++++|++|++++.++++ ++|
T Consensus 25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 104 (272)
T 4dyv_A 25 KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVD 104 (272)
T ss_dssp ---CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 455788999999999999999999999999999999876543 2234678999999999999999886 899
Q ss_pred EEEEc
Q 029118 166 SIICP 170 (198)
Q Consensus 166 aVIh~ 170 (198)
.|||+
T Consensus 105 ~lVnn 109 (272)
T 4dyv_A 105 VLFNN 109 (272)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99997
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=3.6e-12 Score=117.50 Aligned_cols=98 Identities=18% Similarity=0.298 Sum_probs=80.1
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCc-EEEEEeCCccc---------ccccCCceEEEEccCCCHHHHHHhhcCc--
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNA---------MESFGTYVESMAGDASNKKFLKTALRGV-- 164 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~-VralvR~~~~a---------~~~~g~~vevV~GDl~D~~sL~~AL~Gv-- 164 (198)
.++++||||||||+||++++++|+++|++ |.++.|++... ....+..++++.+|++|++++.++++.+
T Consensus 224 ~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~ 303 (486)
T 2fr1_A 224 KPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGD 303 (486)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHh
Confidence 34678999999999999999999999996 88889976421 1123567899999999999999999876
Q ss_pred ----cEEEEcC------------------------hhH--HHHHHHhCCCCeEEEEcccc
Q 029118 165 ----RSIICPS------------------------EGF--ISNAGSLKGVQHVILLSQGA 194 (198)
Q Consensus 165 ----DaVIh~a------------------------~G~--lldAA~~~GVkRiV~vSS~~ 194 (198)
|.|||++ .|+ +.++++..+.++||++||.+
T Consensus 304 ~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a 363 (486)
T 2fr1_A 304 DVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFA 363 (486)
T ss_dssp TSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHH
T ss_pred cCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChH
Confidence 9999982 011 66778888999999999964
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.33 E-value=8.1e-12 Score=103.79 Aligned_cols=103 Identities=13% Similarity=0.028 Sum_probs=79.1
Q ss_pred cccCCCCeEEEEcCCCh-HHHHHHHHHHHCCCcEEEEEeCCccccc-------ccCCceEEEEccCCCHHHHHHhhc---
Q 029118 94 FPEEARDAVLVTDGDSD-IGQMVILSLIVKRTRIKALVKDKRNAME-------SFGTYVESMAGDASNKKFLKTALR--- 162 (198)
Q Consensus 94 ~~~~~~~~ILVTGATGf-IG~~Vvr~Ll~~G~~VralvR~~~~a~~-------~~g~~vevV~GDl~D~~sL~~AL~--- 162 (198)
.....++++|||||+|+ ||++++++|+++|++|.++.|+.++... ..+..++++.+|++|+++++++++
T Consensus 17 ~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 96 (266)
T 3o38_A 17 HGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTV 96 (266)
T ss_dssp CSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHH
Confidence 34567789999999984 9999999999999999999998754321 113579999999999999998885
Q ss_pred ----CccEEEEcC-------------h-----------hH--HHHHH----HhC-CCCeEEEEccccee
Q 029118 163 ----GVRSIICPS-------------E-----------GF--ISNAG----SLK-GVQHVILLSQGAVV 196 (198)
Q Consensus 163 ----GvDaVIh~a-------------~-----------G~--lldAA----~~~-GVkRiV~vSS~~Vy 196 (198)
.+|.|||++ + +. +++++ ++. +..+||++||...+
T Consensus 97 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~ 165 (266)
T 3o38_A 97 EKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGW 165 (266)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGT
T ss_pred HHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHc
Confidence 679999982 0 11 33333 333 67899999997654
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=99.33 E-value=4.2e-12 Score=106.34 Aligned_cols=101 Identities=11% Similarity=0.113 Sum_probs=76.4
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc-cc------cccCCceEEEEccCCCHHHHHHhhc------
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AM------ESFGTYVESMAGDASNKKFLKTALR------ 162 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~-a~------~~~g~~vevV~GDl~D~~sL~~AL~------ 162 (198)
...++++|||||+|+||++++++|+++|++|.++.|+... .. ...+..++++.+|++|+++++++++
T Consensus 22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 101 (269)
T 3gk3_A 22 MQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADF 101 (269)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred hhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 3456789999999999999999999999999999854432 11 1124678999999999999998886
Q ss_pred -CccEEEEcC-------------h-----------hH--H----HHHHHhCCCCeEEEEccccee
Q 029118 163 -GVRSIICPS-------------E-----------GF--I----SNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 163 -GvDaVIh~a-------------~-----------G~--l----ldAA~~~GVkRiV~vSS~~Vy 196 (198)
.+|.|||++ . +. + +..+++.+..+||++||...+
T Consensus 102 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~ 166 (269)
T 3gk3_A 102 GKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGS 166 (269)
T ss_dssp SCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHH
T ss_pred CCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhc
Confidence 899999972 0 11 2 233445677899999997543
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.33 E-value=1.4e-11 Score=108.86 Aligned_cols=101 Identities=19% Similarity=0.223 Sum_probs=80.9
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc-------------cccCCceEEEEccCCCHHHHHHhhc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------------ESFGTYVESMAGDASNKKFLKTALR 162 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~-------------~~~g~~vevV~GDl~D~~sL~~AL~ 162 (198)
...++++|||||+|.||++++++|+++|++|.++.|+.++.. ...+..+.++.+|++|+++++++++
T Consensus 42 ~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~ 121 (346)
T 3kvo_A 42 RLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVE 121 (346)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHH
T ss_pred CCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHH
Confidence 456789999999999999999999999999999999876421 1124578999999999999998886
Q ss_pred -------CccEEEEcC------------------------hhH--HHHH----HHhCCCCeEEEEccccee
Q 029118 163 -------GVRSIICPS------------------------EGF--ISNA----GSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 163 -------GvDaVIh~a------------------------~G~--lldA----A~~~GVkRiV~vSS~~Vy 196 (198)
++|.|||++ .++ ++++ +++.+..|||++||...+
T Consensus 122 ~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~ 192 (346)
T 3kvo_A 122 KAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNL 192 (346)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCC
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHc
Confidence 899999972 011 3333 366788999999997654
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.32 E-value=1.1e-11 Score=104.90 Aligned_cols=101 Identities=14% Similarity=0.125 Sum_probs=78.3
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc-----cccCCceEEEEccCCCHHHHHHhhc------Cc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-----ESFGTYVESMAGDASNKKFLKTALR------GV 164 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~-----~~~g~~vevV~GDl~D~~sL~~AL~------Gv 164 (198)
+..++++|||||+|+||++++++|+++|++|.++.|+..... ...+..++++++|++|++++.++.+ ++
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~i 107 (273)
T 3uf0_A 28 SLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRV 107 (273)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCC
Confidence 355789999999999999999999999999999997653211 1124578999999999999887754 78
Q ss_pred cEEEEcC------------------------hhH--HHH----HHHhCCCCeEEEEccccee
Q 029118 165 RSIICPS------------------------EGF--ISN----AGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 165 DaVIh~a------------------------~G~--lld----AA~~~GVkRiV~vSS~~Vy 196 (198)
|.|||++ .++ +++ .+++++..+||++||...+
T Consensus 108 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~ 169 (273)
T 3uf0_A 108 DVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSF 169 (273)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred cEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhc
Confidence 9999972 011 233 3456788999999998665
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.32 E-value=3.3e-12 Score=108.79 Aligned_cols=100 Identities=16% Similarity=0.157 Sum_probs=79.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------cCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
..++++|||||+|+||++++++|+++|++|.++.|+.++..+. .+..+.++.+|++|++++.++++ +
T Consensus 6 l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 85 (280)
T 3tox_A 6 LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGG 85 (280)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4578999999999999999999999999999999987643211 24568999999999999998886 7
Q ss_pred ccEEEEcC--------------h-----------hH------HHHHHHhCCCCeEEEEccccee
Q 029118 164 VRSIICPS--------------E-----------GF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 164 vDaVIh~a--------------~-----------G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
+|.+||++ + |+ ++..+++.+-.+||++||...+
T Consensus 86 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~ 149 (280)
T 3tox_A 86 LDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGH 149 (280)
T ss_dssp CCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTT
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhC
Confidence 89999972 0 11 2333456677899999997664
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=99.32 E-value=7.8e-12 Score=103.96 Aligned_cols=101 Identities=10% Similarity=0.084 Sum_probs=79.5
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-------cCCceEEEEccC--CCHHHHHHhhc----
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDA--SNKKFLKTALR---- 162 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-------~g~~vevV~GDl--~D~~sL~~AL~---- 162 (198)
...++++|||||+|+||++++++|+++|++|.++.|+.++..+. .+..++++.+|+ +|+++++++++
T Consensus 9 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (252)
T 3f1l_A 9 LLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAV 88 (252)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999987653221 123688999999 99999888875
Q ss_pred ---CccEEEEcC--------------h-----------hH--HHHH----HHhCCCCeEEEEccccee
Q 029118 163 ---GVRSIICPS--------------E-----------GF--ISNA----GSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 163 ---GvDaVIh~a--------------~-----------G~--lldA----A~~~GVkRiV~vSS~~Vy 196 (198)
.+|.+||++ + +. ++++ +++.+..+||++||...+
T Consensus 89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~ 156 (252)
T 3f1l_A 89 NYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGR 156 (252)
T ss_dssp HCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGT
T ss_pred hCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhc
Confidence 789999972 0 11 3333 366788999999997654
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=4.4e-12 Score=107.02 Aligned_cols=101 Identities=11% Similarity=0.063 Sum_probs=79.3
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc-------ccCCceEEEEccCCCHHHHHHhhc------
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------SFGTYVESMAGDASNKKFLKTALR------ 162 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~-------~~g~~vevV~GDl~D~~sL~~AL~------ 162 (198)
...++++|||||+|+||++++++|+++|++|.++.|+.++..+ ..+..+.++++|++|+++++++++
T Consensus 24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 103 (277)
T 4fc7_A 24 LLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEF 103 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 3567899999999999999999999999999999998754321 125678999999999999988886
Q ss_pred -CccEEEEcC------------------------hhH--HHHHH----HhCCCCeEEEEccccee
Q 029118 163 -GVRSIICPS------------------------EGF--ISNAG----SLKGVQHVILLSQGAVV 196 (198)
Q Consensus 163 -GvDaVIh~a------------------------~G~--lldAA----~~~GVkRiV~vSS~~Vy 196 (198)
++|.|||++ .++ +.+++ ++.+..+||++||...+
T Consensus 104 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~ 168 (277)
T 4fc7_A 104 GRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGN 168 (277)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHH
T ss_pred CCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhC
Confidence 789999972 011 33333 45567899999997543
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.31 E-value=4.5e-12 Score=105.68 Aligned_cols=100 Identities=12% Similarity=0.155 Sum_probs=76.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------c--C-CceEEEEccCCCHHHHHHhhc-----
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------F--G-TYVESMAGDASNKKFLKTALR----- 162 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~--g-~~vevV~GDl~D~~sL~~AL~----- 162 (198)
..++++|||||+|+||++++++|+++|++|.++.|+.++.... . + ..+.++.+|++|++++.++++
T Consensus 5 ~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 84 (250)
T 3nyw_A 5 KQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQK 84 (250)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHh
Confidence 4567999999999999999999999999999999987653221 0 2 568899999999999988875
Q ss_pred --CccEEEEcC------------h-----------hH--HH----HHHHhCCCCeEEEEccccee
Q 029118 163 --GVRSIICPS------------E-----------GF--IS----NAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 163 --GvDaVIh~a------------~-----------G~--ll----dAA~~~GVkRiV~vSS~~Vy 196 (198)
.+|.+||++ + +. ++ ..+++.+..+||++||...+
T Consensus 85 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~ 149 (250)
T 3nyw_A 85 YGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAK 149 (250)
T ss_dssp HCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC----
T ss_pred cCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhc
Confidence 689999972 0 11 23 33456678899999997654
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.31 E-value=4.8e-12 Score=107.06 Aligned_cols=101 Identities=10% Similarity=0.115 Sum_probs=79.2
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhc-------
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR------- 162 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~------- 162 (198)
...++++|||||+|+||++++++|+++|++|.++.|+.+...+ ..+..+.++.+|++|+++++++++
T Consensus 25 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 104 (270)
T 3ftp_A 25 TLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFG 104 (270)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 3567899999999999999999999999999999998754321 124568899999999999998886
Q ss_pred CccEEEEcC------------------------hhH--HHHH----HHhCCCCeEEEEccccee
Q 029118 163 GVRSIICPS------------------------EGF--ISNA----GSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 163 GvDaVIh~a------------------------~G~--lldA----A~~~GVkRiV~vSS~~Vy 196 (198)
++|.|||++ .++ ++++ .++.+-.+||++||...+
T Consensus 105 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~ 168 (270)
T 3ftp_A 105 ALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGS 168 (270)
T ss_dssp CCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhC
Confidence 789999972 011 2333 345567899999997543
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.31 E-value=8.7e-12 Score=102.08 Aligned_cols=101 Identities=11% Similarity=0.037 Sum_probs=78.0
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-------cCCceEEEEccC--CCHHHHHHhhc----
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDA--SNKKFLKTALR---- 162 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-------~g~~vevV~GDl--~D~~sL~~AL~---- 162 (198)
...++++|||||+|+||++++++|+++|++|.++.|++++.... ....+.++..|+ +|++++.++++
T Consensus 11 ~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~ 90 (247)
T 3i1j_A 11 LLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEH 90 (247)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999987653211 124577888888 99998888765
Q ss_pred ---CccEEEEcC--------------h-----------hH--HHHHH----HhCCCCeEEEEccccee
Q 029118 163 ---GVRSIICPS--------------E-----------GF--ISNAG----SLKGVQHVILLSQGAVV 196 (198)
Q Consensus 163 ---GvDaVIh~a--------------~-----------G~--lldAA----~~~GVkRiV~vSS~~Vy 196 (198)
++|.|||++ + ++ +++++ ++.+..+||++||...+
T Consensus 91 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~ 158 (247)
T 3i1j_A 91 EFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGR 158 (247)
T ss_dssp HHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGT
T ss_pred hCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhc
Confidence 789999972 0 11 33343 56778899999997654
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.30 E-value=1.3e-11 Score=103.90 Aligned_cols=101 Identities=14% Similarity=0.106 Sum_probs=77.2
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCC-------------cccc------cccCCceEEEEccCCCHHH
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-------------RNAM------ESFGTYVESMAGDASNKKF 156 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~-------------~~a~------~~~g~~vevV~GDl~D~~s 156 (198)
...++++|||||+|+||++++++|+++|++|.++.|+. +... ...+..+.++++|++|+++
T Consensus 12 ~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 91 (280)
T 3pgx_A 12 SLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAA 91 (280)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHH
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence 45678999999999999999999999999999999842 2111 1234568899999999999
Q ss_pred HHHhhc-------CccEEEEcC------------------------hhH--HHHH----HHhCC-CCeEEEEccccee
Q 029118 157 LKTALR-------GVRSIICPS------------------------EGF--ISNA----GSLKG-VQHVILLSQGAVV 196 (198)
Q Consensus 157 L~~AL~-------GvDaVIh~a------------------------~G~--lldA----A~~~G-VkRiV~vSS~~Vy 196 (198)
++++++ ++|.+||++ .++ ++++ +++.+ -.+||++||...+
T Consensus 92 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 169 (280)
T 3pgx_A 92 LRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGL 169 (280)
T ss_dssp HHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGT
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhc
Confidence 998875 789999972 011 2333 34444 6799999997664
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.30 E-value=1.5e-11 Score=104.33 Aligned_cols=75 Identities=16% Similarity=0.202 Sum_probs=62.4
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeC-Ccccc------cccCCceEEEEccCCCHHHHHHhhc------
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-KRNAM------ESFGTYVESMAGDASNKKFLKTALR------ 162 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~-~~~a~------~~~g~~vevV~GDl~D~~sL~~AL~------ 162 (198)
...++++|||||+|+||++++++|+++|++|.++.|+ ++... ...+..+.++++|++|+++++++++
T Consensus 26 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 105 (280)
T 4da9_A 26 QKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEF 105 (280)
T ss_dssp CCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHH
T ss_pred ccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 3556789999999999999999999999999999964 33221 1135678999999999999998886
Q ss_pred -CccEEEEc
Q 029118 163 -GVRSIICP 170 (198)
Q Consensus 163 -GvDaVIh~ 170 (198)
++|.|||+
T Consensus 106 g~iD~lvnn 114 (280)
T 4da9_A 106 GRIDCLVNN 114 (280)
T ss_dssp SCCCEEEEE
T ss_pred CCCCEEEEC
Confidence 88999987
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=1.4e-11 Score=103.13 Aligned_cols=100 Identities=12% Similarity=0.100 Sum_probs=77.8
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-------cC-CceEEEEccCCCHHHHHHhhc------
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FG-TYVESMAGDASNKKFLKTALR------ 162 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-------~g-~~vevV~GDl~D~~sL~~AL~------ 162 (198)
..++++|||||+|.||++++++|+++|++|.++.|++++.... .+ ..+.++.+|++|++++.++++
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 85 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTL 85 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 4578999999999999999999999999999999987643211 22 248999999999999888875
Q ss_pred -CccEEEEcC-------------h-----------hH--HHHH----HHhCCCCeEEEEccccee
Q 029118 163 -GVRSIICPS-------------E-----------GF--ISNA----GSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 163 -GvDaVIh~a-------------~-----------G~--lldA----A~~~GVkRiV~vSS~~Vy 196 (198)
.+|.+||++ + ++ +.++ .++.+-.+||++||...+
T Consensus 86 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 150 (265)
T 3lf2_A 86 GCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLAS 150 (265)
T ss_dssp CSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGT
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccC
Confidence 679999972 0 11 2333 355677899999997654
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.30 E-value=6.1e-12 Score=106.02 Aligned_cols=74 Identities=18% Similarity=0.170 Sum_probs=62.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc--cCCceEEEEccCCCHHHHHHhhc-------CccEE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--FGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~--~g~~vevV~GDl~D~~sL~~AL~-------GvDaV 167 (198)
..++++|||||+|+||++++++|+++|++|.++.|++++.... .-..++++++|++|+++++++++ ++|.|
T Consensus 7 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 86 (270)
T 1yde_A 7 YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCV 86 (270)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4567999999999999999999999999999999987543221 11248899999999999998876 78999
Q ss_pred EEc
Q 029118 168 ICP 170 (198)
Q Consensus 168 Ih~ 170 (198)
||+
T Consensus 87 v~n 89 (270)
T 1yde_A 87 VNN 89 (270)
T ss_dssp EEC
T ss_pred EEC
Confidence 997
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=99.30 E-value=8e-12 Score=108.72 Aligned_cols=98 Identities=19% Similarity=0.224 Sum_probs=76.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc---c---------cCCceEEEEccCCCHHHHHHhhcC---
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---S---------FGTYVESMAGDASNKKFLKTALRG--- 163 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~---~---------~g~~vevV~GDl~D~~sL~~AL~G--- 163 (198)
++++|||||+|+||++++++|+++|++|.++.|+...... . .+..++++.+|++|++++.++++.
T Consensus 2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 81 (327)
T 1jtv_A 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE 81 (327)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhc
Confidence 4689999999999999999999999999998886543211 1 135689999999999999999875
Q ss_pred --ccEEEEcC------------------------hhH--HHHH----HHhCCCCeEEEEccccee
Q 029118 164 --VRSIICPS------------------------EGF--ISNA----GSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 164 --vDaVIh~a------------------------~G~--lldA----A~~~GVkRiV~vSS~~Vy 196 (198)
+|.|||++ .++ ++++ +++.+..|||++||.+.+
T Consensus 82 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~ 146 (327)
T 1jtv_A 82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGL 146 (327)
T ss_dssp SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGT
T ss_pred CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccc
Confidence 89999972 011 2333 456788999999997654
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.30 E-value=5.2e-12 Score=103.42 Aligned_cols=68 Identities=12% Similarity=0.182 Sum_probs=59.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc---------CccEEEE
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR---------GVRSIIC 169 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~---------GvDaVIh 169 (198)
++++|||||+|+||++++++|+++|++|.++.|++++.. ....++.+|++|++++.++++ ++|.|||
T Consensus 3 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~ 78 (236)
T 1ooe_A 3 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA----DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFC 78 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS----SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc----cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEEEE
Confidence 468999999999999999999999999999999876542 236788999999999988875 7899999
Q ss_pred c
Q 029118 170 P 170 (198)
Q Consensus 170 ~ 170 (198)
+
T Consensus 79 ~ 79 (236)
T 1ooe_A 79 V 79 (236)
T ss_dssp C
T ss_pred C
Confidence 7
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=6.9e-12 Score=103.23 Aligned_cols=69 Identities=13% Similarity=0.146 Sum_probs=60.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc---------CccEEE
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR---------GVRSII 168 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~---------GvDaVI 168 (198)
.++++|||||+|+||++++++|+++|++|.++.|++++.. ....++.+|++|+++++++++ ++|.||
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~lv 81 (241)
T 1dhr_A 6 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAIL 81 (241)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc----CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEEE
Confidence 4578999999999999999999999999999999876542 236788999999999988875 689999
Q ss_pred Ec
Q 029118 169 CP 170 (198)
Q Consensus 169 h~ 170 (198)
|+
T Consensus 82 ~~ 83 (241)
T 1dhr_A 82 CV 83 (241)
T ss_dssp EC
T ss_pred Ec
Confidence 97
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.29 E-value=1.7e-11 Score=102.52 Aligned_cols=101 Identities=16% Similarity=0.119 Sum_probs=77.3
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc------------cc------cccCCceEEEEccCCCHHHH
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN------------AM------ESFGTYVESMAGDASNKKFL 157 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~------------a~------~~~g~~vevV~GDl~D~~sL 157 (198)
...++++|||||+|+||++++++|+++|++|.++.|+... .. ...+..+.++.+|++|++++
T Consensus 7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v 86 (287)
T 3pxx_A 7 RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAV 86 (287)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHH
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHH
Confidence 4567899999999999999999999999999999987321 10 11245789999999999999
Q ss_pred HHhhc-------CccEEEEcC-----------h-----------hH--HHHHHHhC--CCCeEEEEccccee
Q 029118 158 KTALR-------GVRSIICPS-----------E-----------GF--ISNAGSLK--GVQHVILLSQGAVV 196 (198)
Q Consensus 158 ~~AL~-------GvDaVIh~a-----------~-----------G~--lldAA~~~--GVkRiV~vSS~~Vy 196 (198)
+++++ ++|.|||++ + ++ +++++... +-.+||++||...+
T Consensus 87 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~ 158 (287)
T 3pxx_A 87 SRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGL 158 (287)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHH
T ss_pred HHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhc
Confidence 98886 899999972 0 11 44555432 34699999997543
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.28 E-value=1.8e-11 Score=104.45 Aligned_cols=102 Identities=19% Similarity=0.203 Sum_probs=78.3
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc--cc------cccCCceEEEEccCCCHHHHHHhhc-----
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--AM------ESFGTYVESMAGDASNKKFLKTALR----- 162 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~--a~------~~~g~~vevV~GDl~D~~sL~~AL~----- 162 (198)
...++++|||||+|+||++++++|+++|++|.+..|+... .. ...+..+.++.+|++|+++++++++
T Consensus 46 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 125 (294)
T 3r3s_A 46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREA 125 (294)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 4567899999999999999999999999999999887431 11 1235678999999999999888874
Q ss_pred --CccEEEEcC-----h--------------------hH--HHHHHHhCCC--CeEEEEcccceec
Q 029118 163 --GVRSIICPS-----E--------------------GF--ISNAGSLKGV--QHVILLSQGAVVC 197 (198)
Q Consensus 163 --GvDaVIh~a-----~--------------------G~--lldAA~~~GV--kRiV~vSS~~Vy~ 197 (198)
++|.+||++ . ++ +++++...-. .+||++||...+.
T Consensus 126 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~ 191 (294)
T 3r3s_A 126 LGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQ 191 (294)
T ss_dssp HTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTS
T ss_pred cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhcc
Confidence 789999972 0 11 4555554433 4999999987653
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=1.6e-11 Score=102.46 Aligned_cols=101 Identities=18% Similarity=0.201 Sum_probs=76.2
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeC-Ccccc------cccCCceEEEEccCCCHHHHHHhhc------
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-KRNAM------ESFGTYVESMAGDASNKKFLKTALR------ 162 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~-~~~a~------~~~g~~vevV~GDl~D~~sL~~AL~------ 162 (198)
+..++++|||||+|+||++++++|+++|++|.++.+. .+... ...+..++++.+|++|++++.++++
T Consensus 23 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 102 (267)
T 4iiu_A 23 NAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQH 102 (267)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence 4556789999999999999999999999999887644 33221 1134678999999999999998886
Q ss_pred -CccEEEEcC------------------------hhH--HHHHH-----HhCCCCeEEEEccccee
Q 029118 163 -GVRSIICPS------------------------EGF--ISNAG-----SLKGVQHVILLSQGAVV 196 (198)
Q Consensus 163 -GvDaVIh~a------------------------~G~--lldAA-----~~~GVkRiV~vSS~~Vy 196 (198)
.+|.|||++ .++ +++++ ++.+..+||++||...+
T Consensus 103 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~ 168 (267)
T 4iiu_A 103 GAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGV 168 (267)
T ss_dssp CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHH
T ss_pred CCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhc
Confidence 789999972 011 34443 25678899999997543
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=99.28 E-value=1.1e-11 Score=103.73 Aligned_cols=101 Identities=12% Similarity=0.125 Sum_probs=78.1
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc---ccCCceEEEEccCCCHHHHHHhhc-------Ccc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVR 165 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~---~~g~~vevV~GDl~D~~sL~~AL~-------GvD 165 (198)
+..++++|||||+|+||++++++|+++|++|.++.|++++..+ ..+..+.++.+|++|+++++++++ ++|
T Consensus 5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 84 (255)
T 4eso_A 5 NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAID 84 (255)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 3457899999999999999999999999999999998765432 235678999999999999887764 789
Q ss_pred EEEEcC-------------h-----------hH--HHHHHHhC--CCCeEEEEccccee
Q 029118 166 SIICPS-------------E-----------GF--ISNAGSLK--GVQHVILLSQGAVV 196 (198)
Q Consensus 166 aVIh~a-------------~-----------G~--lldAA~~~--GVkRiV~vSS~~Vy 196 (198)
.+||++ + +. +.+++... .-.+||++||...+
T Consensus 85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~ 143 (255)
T 4eso_A 85 LLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADE 143 (255)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGS
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhc
Confidence 999972 0 11 34554332 12589999998665
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.28 E-value=1.3e-11 Score=103.23 Aligned_cols=101 Identities=13% Similarity=0.205 Sum_probs=76.3
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCC-cccc------cccCCceEEEEccCCCHHHHHHhhc------
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAM------ESFGTYVESMAGDASNKKFLKTALR------ 162 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~-~~a~------~~~g~~vevV~GDl~D~~sL~~AL~------ 162 (198)
...++++|||||+|+||++++++|+++|++|.++.|+. +... ...+..+.++.+|++|+++++++++
T Consensus 5 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (259)
T 3edm_A 5 RFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKF 84 (259)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 35678999999999999999999999999999985543 3221 1235678999999999999998886
Q ss_pred -CccEEEEcC--------------h-----------hH--HHHHHHhCCC--CeEEEEccccee
Q 029118 163 -GVRSIICPS--------------E-----------GF--ISNAGSLKGV--QHVILLSQGAVV 196 (198)
Q Consensus 163 -GvDaVIh~a--------------~-----------G~--lldAA~~~GV--kRiV~vSS~~Vy 196 (198)
++|.+||++ + +. +.+++...-. .+||++||...+
T Consensus 85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~ 148 (259)
T 3edm_A 85 GEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGR 148 (259)
T ss_dssp CSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHH
T ss_pred CCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhc
Confidence 789999972 0 11 4455544332 489999997654
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.27 E-value=1.3e-11 Score=104.16 Aligned_cols=96 Identities=15% Similarity=0.146 Sum_probs=75.6
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc-------CccEEE
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSII 168 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~-------GvDaVI 168 (198)
...++++|||||+|+||++++++|+++|++|.++.|+.+.... ...+.+|++|++.+.++++ ++|.||
T Consensus 25 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~-----~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~lv 99 (266)
T 3uxy_A 25 GFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAA-----DLHLPGDLREAAYADGLPGAVAAGLGRLDIVV 99 (266)
T ss_dssp -CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCC-----SEECCCCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHh-----hhccCcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 4567899999999999999999999999999999998765432 2445899999998887764 789999
Q ss_pred EcC------------------------hhH--HHHHH----HhCCCCeEEEEccccee
Q 029118 169 CPS------------------------EGF--ISNAG----SLKGVQHVILLSQGAVV 196 (198)
Q Consensus 169 h~a------------------------~G~--lldAA----~~~GVkRiV~vSS~~Vy 196 (198)
|++ .|+ +++++ ++.+..+||++||...+
T Consensus 100 nnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~ 157 (266)
T 3uxy_A 100 NNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGL 157 (266)
T ss_dssp ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTT
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhC
Confidence 972 011 33443 66788999999998664
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.27 E-value=3.9e-11 Score=101.49 Aligned_cols=74 Identities=19% Similarity=0.304 Sum_probs=62.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc-cc------cccCCceEEEEccCCCHHHHHHhhc-------
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AM------ESFGTYVESMAGDASNKKFLKTALR------- 162 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~-a~------~~~g~~vevV~GDl~D~~sL~~AL~------- 162 (198)
..++++|||||+|+||++++++|+++|++|.++.|+... .. ...+..+.++.+|++|+++++++++
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 108 (271)
T 3v2g_A 29 LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALG 108 (271)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 456899999999999999999999999999999776532 11 1135678999999999999998886
Q ss_pred CccEEEEc
Q 029118 163 GVRSIICP 170 (198)
Q Consensus 163 GvDaVIh~ 170 (198)
++|.+||+
T Consensus 109 ~iD~lvnn 116 (271)
T 3v2g_A 109 GLDILVNS 116 (271)
T ss_dssp CCCEEEEC
T ss_pred CCcEEEEC
Confidence 89999997
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.27 E-value=1.4e-11 Score=105.41 Aligned_cols=101 Identities=16% Similarity=0.172 Sum_probs=79.4
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCC---cEEEEEeCCcccccc--------cCCceEEEEccCCCHHHHHHhhc--
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT---RIKALVKDKRNAMES--------FGTYVESMAGDASNKKFLKTALR-- 162 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~---~VralvR~~~~a~~~--------~g~~vevV~GDl~D~~sL~~AL~-- 162 (198)
...++++|||||+|+||++++++|+++|+ +|.+..|+.+...+. .+..+.++.+|++|+++++++++
T Consensus 30 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 109 (287)
T 3rku_A 30 RLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENL 109 (287)
T ss_dssp HHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTS
T ss_pred hcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 34578999999999999999999999998 999999987653221 14568999999999999998886
Q ss_pred -----CccEEEEcC-------------------------hhH--HHHH----HHhCCCCeEEEEccccee
Q 029118 163 -----GVRSIICPS-------------------------EGF--ISNA----GSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 163 -----GvDaVIh~a-------------------------~G~--lldA----A~~~GVkRiV~vSS~~Vy 196 (198)
++|.|||++ .|. ++++ +++.+..+||++||...+
T Consensus 110 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~ 179 (287)
T 3rku_A 110 PQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGR 179 (287)
T ss_dssp CGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGT
T ss_pred HHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhc
Confidence 679999972 011 2333 366788999999997654
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=99.26 E-value=3e-11 Score=101.39 Aligned_cols=99 Identities=13% Similarity=0.146 Sum_probs=76.5
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc-c------cccCCceEEEEccCCCHHHHHHhhc------
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-M------ESFGTYVESMAGDASNKKFLKTALR------ 162 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a-~------~~~g~~vevV~GDl~D~~sL~~AL~------ 162 (198)
...++++|||||+|+||++++++|+++|++|.++.|+.... . ...+..+.++.+|++|++++.++++
T Consensus 15 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 94 (270)
T 3is3_A 15 RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHF 94 (270)
T ss_dssp CCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 45678999999999999999999999999999988765321 1 1235678999999999999998886
Q ss_pred -CccEEEEcC------------------------hhH--HHHHHHhCCC--CeEEEEcccc
Q 029118 163 -GVRSIICPS------------------------EGF--ISNAGSLKGV--QHVILLSQGA 194 (198)
Q Consensus 163 -GvDaVIh~a------------------------~G~--lldAA~~~GV--kRiV~vSS~~ 194 (198)
.+|.+||++ .|. +.+++...-. .+||++||..
T Consensus 95 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~ 155 (270)
T 3is3_A 95 GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNT 155 (270)
T ss_dssp SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTT
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCch
Confidence 789999872 011 4455544333 4999999975
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.26 E-value=1.5e-11 Score=114.42 Aligned_cols=98 Identities=17% Similarity=0.258 Sum_probs=77.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCc-EEEEEeCCccc---c------cccCCceEEEEccCCCHHHHHHhhcC--c
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNA---M------ESFGTYVESMAGDASNKKFLKTALRG--V 164 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~-VralvR~~~~a---~------~~~g~~vevV~GDl~D~~sL~~AL~G--v 164 (198)
.++++||||||+|+||++++++|.++|++ |.++.|+.... . ...+..++++.+|++|++++.++++. +
T Consensus 257 ~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~l 336 (511)
T 2z5l_A 257 QPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYPP 336 (511)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCC
Confidence 35679999999999999999999999995 88888876321 1 11355689999999999999999976 9
Q ss_pred cEEEEcC----h--------------------hH--HHHHHHhC-CCCeEEEEcccc
Q 029118 165 RSIICPS----E--------------------GF--ISNAGSLK-GVQHVILLSQGA 194 (198)
Q Consensus 165 DaVIh~a----~--------------------G~--lldAA~~~-GVkRiV~vSS~~ 194 (198)
|.|||++ . |+ +.+++... +.++||++||.+
T Consensus 337 d~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a 393 (511)
T 2z5l_A 337 NAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVT 393 (511)
T ss_dssp SEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGG
T ss_pred cEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHH
Confidence 9999982 0 11 45666665 889999999974
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.26 E-value=1.2e-11 Score=103.40 Aligned_cols=73 Identities=19% Similarity=0.224 Sum_probs=60.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEE-EeCCccccc------ccCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~Vral-vR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
.++++|||||+|+||++++++|+++|++|.++ .|+.+.... ..+..+.++.+|++|+++++++++ +
T Consensus 25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 104 (272)
T 4e3z_A 25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGR 104 (272)
T ss_dssp CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 45789999999999999999999999999887 455443221 124678999999999999998886 7
Q ss_pred ccEEEEc
Q 029118 164 VRSIICP 170 (198)
Q Consensus 164 vDaVIh~ 170 (198)
+|.|||+
T Consensus 105 id~li~n 111 (272)
T 4e3z_A 105 LDGLVNN 111 (272)
T ss_dssp CCEEEEC
T ss_pred CCEEEEC
Confidence 8999997
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.26 E-value=2.3e-11 Score=103.45 Aligned_cols=74 Identities=12% Similarity=0.159 Sum_probs=60.1
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-------cCCceEEEEccCCCHHHHHHhhc-------
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR------- 162 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-------~g~~vevV~GDl~D~~sL~~AL~------- 162 (198)
..++++|||||+|+||++++++|+++|++|.++.|+++..... -+..+.++++|++|+++++++++
T Consensus 31 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 110 (281)
T 4dry_A 31 GEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFA 110 (281)
T ss_dssp ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 3567999999999999999999999999999999987643221 12235899999999999988875
Q ss_pred CccEEEEc
Q 029118 163 GVRSIICP 170 (198)
Q Consensus 163 GvDaVIh~ 170 (198)
.+|.|||+
T Consensus 111 ~iD~lvnn 118 (281)
T 4dry_A 111 RLDLLVNN 118 (281)
T ss_dssp CCSEEEEC
T ss_pred CCCEEEEC
Confidence 67999997
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=7.5e-11 Score=99.32 Aligned_cols=75 Identities=16% Similarity=0.141 Sum_probs=62.3
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCc----------------ccc------cccCCceEEEEccCCC
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR----------------NAM------ESFGTYVESMAGDASN 153 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~----------------~a~------~~~g~~vevV~GDl~D 153 (198)
...++++|||||+|.||++++++|+++|++|.++.|++. ... ...+..+.++.+|++|
T Consensus 8 ~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~ 87 (286)
T 3uve_A 8 RVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRD 87 (286)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTC
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCC
Confidence 356789999999999999999999999999999998731 111 1124568999999999
Q ss_pred HHHHHHhhc-------CccEEEEc
Q 029118 154 KKFLKTALR-------GVRSIICP 170 (198)
Q Consensus 154 ~~sL~~AL~-------GvDaVIh~ 170 (198)
+++++++++ ++|.+||+
T Consensus 88 ~~~v~~~~~~~~~~~g~id~lv~n 111 (286)
T 3uve_A 88 YDALKAAVDSGVEQLGRLDIIVAN 111 (286)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEC
Confidence 999998886 78999997
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.25 E-value=2.7e-11 Score=101.63 Aligned_cols=75 Identities=11% Similarity=0.201 Sum_probs=64.6
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc---cccCCceEEEEccCCCHHHHHHhhc------CccE
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALR------GVRS 166 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~---~~~g~~vevV~GDl~D~~sL~~AL~------GvDa 166 (198)
+..++++|||||+|+||++++++|+++|++|.++.|+.++.. ...+..++++.+|++|+++++++++ ++|.
T Consensus 27 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~ 106 (281)
T 3ppi_A 27 QFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRY 106 (281)
T ss_dssp GGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEE
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCe
Confidence 456778999999999999999999999999999999876543 2245679999999999999998886 6799
Q ss_pred EEEc
Q 029118 167 IICP 170 (198)
Q Consensus 167 VIh~ 170 (198)
+||+
T Consensus 107 lv~~ 110 (281)
T 3ppi_A 107 AVVA 110 (281)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 9987
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=99.24 E-value=2.1e-11 Score=103.04 Aligned_cols=76 Identities=13% Similarity=0.137 Sum_probs=62.4
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCC-ccccc-------ccCCceEEEEccCCC----HHHHHHhhc
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAME-------SFGTYVESMAGDASN----KKFLKTALR 162 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~-~~a~~-------~~g~~vevV~GDl~D----~~sL~~AL~ 162 (198)
....++++|||||+|+||++++++|+++|++|.++.|++ ++... ..+..+.++.+|++| ++++.++++
T Consensus 19 ~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~ 98 (288)
T 2x9g_A 19 SHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIIN 98 (288)
T ss_dssp ---CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHH
Confidence 345678999999999999999999999999999999987 43211 224568999999999 998888775
Q ss_pred -------CccEEEEc
Q 029118 163 -------GVRSIICP 170 (198)
Q Consensus 163 -------GvDaVIh~ 170 (198)
++|.|||+
T Consensus 99 ~~~~~~g~iD~lvnn 113 (288)
T 2x9g_A 99 SCFRAFGRCDVLVNN 113 (288)
T ss_dssp HHHHHHSCCCEEEEC
T ss_pred HHHHhcCCCCEEEEC
Confidence 78999997
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.24 E-value=2.9e-11 Score=99.68 Aligned_cols=95 Identities=15% Similarity=0.172 Sum_probs=74.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHH-CCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc-----CccEEEEcC
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIV-KRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-----GVRSIICPS 171 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~-~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~-----GvDaVIh~a 171 (198)
.++++|||||+|+||++++++|++ .|+.|.+..|+++.. ...++++.+|++|++++.++++ ++|.+||++
T Consensus 3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~nA 78 (244)
T 4e4y_A 3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS----AENLKFIKADLTKQQDITNVLDIIKNVSFDGIFLNA 78 (244)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC----CTTEEEEECCTTCHHHHHHHHHHTTTCCEEEEEECC
T ss_pred CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc----cccceEEecCcCCHHHHHHHHHHHHhCCCCEEEECC
Confidence 467899999999999999999999 799999998876532 2357899999999999999886 789999972
Q ss_pred -------------h-----------hH--HHHHHHhCCC--CeEEEEccccee
Q 029118 172 -------------E-----------GF--ISNAGSLKGV--QHVILLSQGAVV 196 (198)
Q Consensus 172 -------------~-----------G~--lldAA~~~GV--kRiV~vSS~~Vy 196 (198)
+ +. +++++...-. .+||++||...+
T Consensus 79 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~ 131 (244)
T 4e4y_A 79 GILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCF 131 (244)
T ss_dssp CCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGT
T ss_pred ccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHc
Confidence 0 11 4455443322 489999998664
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.24 E-value=3.1e-11 Score=100.29 Aligned_cols=66 Identities=17% Similarity=0.240 Sum_probs=57.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc-------CccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~-------GvDaVIh~ 170 (198)
++++|||||+|+||++++++|+++|++|.++.|++++.. ...+..|++|+++++++++ .+|.|||+
T Consensus 22 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~------~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~ 94 (251)
T 3orf_A 22 SKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA------DHSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCA 94 (251)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS------SEEEECSCSSHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc------ccceEEEeCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 568999999999999999999999999999999886542 2457889999999998875 45999997
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.24 E-value=2.7e-11 Score=100.79 Aligned_cols=97 Identities=18% Similarity=0.294 Sum_probs=75.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC--CcEEEEEeCCcccc---cccCCceEEEEccCCCHHHHHHhhc-------CccE
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G--~~VralvR~~~~a~---~~~g~~vevV~GDl~D~~sL~~AL~-------GvDa 166 (198)
++++|||||+|+||++++++|+++| +.|.+..|+.++.. +..+..+.++.+|++|+++++++++ .+|.
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 81 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDS 81 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccE
Confidence 3689999999999999999999985 78888888875532 2235578999999999999998886 7899
Q ss_pred EEEcC--------------h-----------hH--HHHHH----HhCCCCeEEEEccccee
Q 029118 167 IICPS--------------E-----------GF--ISNAG----SLKGVQHVILLSQGAVV 196 (198)
Q Consensus 167 VIh~a--------------~-----------G~--lldAA----~~~GVkRiV~vSS~~Vy 196 (198)
+||++ + ++ +++++ ++.+ .+||++||...+
T Consensus 82 lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~ 141 (254)
T 3kzv_A 82 LVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACN 141 (254)
T ss_dssp EEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCC
T ss_pred EEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhc
Confidence 99872 0 11 33333 5556 899999998765
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=2e-11 Score=101.84 Aligned_cols=74 Identities=12% Similarity=0.093 Sum_probs=60.9
Q ss_pred CCCCeEEEEcCC--ChHHHHHHHHHHHCCCcEEEEEeCCc---ccccc--cCCceEEEEccCCCHHHHHHhhc-------
Q 029118 97 EARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKR---NAMES--FGTYVESMAGDASNKKFLKTALR------- 162 (198)
Q Consensus 97 ~~~~~ILVTGAT--GfIG~~Vvr~Ll~~G~~VralvR~~~---~a~~~--~g~~vevV~GDl~D~~sL~~AL~------- 162 (198)
..++++|||||+ |+||++++++|+++|++|.++.|+++ ...+. ....+.++.+|++|+++++++++
T Consensus 6 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (261)
T 2wyu_A 6 LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFG 85 (261)
T ss_dssp CTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 346789999999 99999999999999999999999874 11111 01237899999999999998886
Q ss_pred CccEEEEc
Q 029118 163 GVRSIICP 170 (198)
Q Consensus 163 GvDaVIh~ 170 (198)
++|.|||+
T Consensus 86 ~iD~lv~~ 93 (261)
T 2wyu_A 86 GLDYLVHA 93 (261)
T ss_dssp SEEEEEEC
T ss_pred CCCEEEEC
Confidence 78999997
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=3.9e-11 Score=99.66 Aligned_cols=74 Identities=14% Similarity=0.059 Sum_probs=61.5
Q ss_pred CCCCeEEEEcCCCh--HHHHHHHHHHHCCCcEEEEEeCCcccc------cccCC-ceEEEEccCCCHHHHHHhhc-----
Q 029118 97 EARDAVLVTDGDSD--IGQMVILSLIVKRTRIKALVKDKRNAM------ESFGT-YVESMAGDASNKKFLKTALR----- 162 (198)
Q Consensus 97 ~~~~~ILVTGATGf--IG~~Vvr~Ll~~G~~VralvR~~~~a~------~~~g~-~vevV~GDl~D~~sL~~AL~----- 162 (198)
..++++|||||+|+ ||++++++|+++|++|.++.|+..... ...+. .+.++.+|++|+++++++++
T Consensus 5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (266)
T 3oig_A 5 LEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQ 84 (266)
T ss_dssp CTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHH
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHH
Confidence 45689999999999 999999999999999999998864221 11222 68999999999999998875
Q ss_pred --CccEEEEc
Q 029118 163 --GVRSIICP 170 (198)
Q Consensus 163 --GvDaVIh~ 170 (198)
.+|.|||+
T Consensus 85 ~g~id~li~~ 94 (266)
T 3oig_A 85 VGVIHGIAHC 94 (266)
T ss_dssp HSCCCEEEEC
T ss_pred hCCeeEEEEc
Confidence 68999997
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=4.9e-11 Score=101.02 Aligned_cols=74 Identities=20% Similarity=0.315 Sum_probs=63.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc---ccCCceEEEEccCCCHHHHHHhhc-------CccE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~---~~g~~vevV~GDl~D~~sL~~AL~-------GvDa 166 (198)
..++++|||||+|+||++++++|+++|++|.++.|+.++..+ ..+..+.++.+|++|++++.++++ .+|.
T Consensus 3 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~ 82 (281)
T 3zv4_A 3 LTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDT 82 (281)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 356799999999999999999999999999999998765432 235678999999999999888875 6799
Q ss_pred EEEc
Q 029118 167 IICP 170 (198)
Q Consensus 167 VIh~ 170 (198)
+||+
T Consensus 83 lvnn 86 (281)
T 3zv4_A 83 LIPN 86 (281)
T ss_dssp EECC
T ss_pred EEEC
Confidence 9987
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.22 E-value=3.3e-11 Score=101.68 Aligned_cols=74 Identities=12% Similarity=-0.012 Sum_probs=60.9
Q ss_pred CCCCeEEEEcCC--ChHHHHHHHHHHHCCCcEEEEEeCCc---ccccc--cCCceEEEEccCCCHHHHHHhhc-------
Q 029118 97 EARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKR---NAMES--FGTYVESMAGDASNKKFLKTALR------- 162 (198)
Q Consensus 97 ~~~~~ILVTGAT--GfIG~~Vvr~Ll~~G~~VralvR~~~---~a~~~--~g~~vevV~GDl~D~~sL~~AL~------- 162 (198)
..++++|||||+ |+||++++++|+++|++|.++.|+++ ...+. ....+.++.+|++|+++++++++
T Consensus 19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 98 (285)
T 2p91_A 19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWG 98 (285)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 456799999999 99999999999999999999999874 11111 11237899999999999998876
Q ss_pred CccEEEEc
Q 029118 163 GVRSIICP 170 (198)
Q Consensus 163 GvDaVIh~ 170 (198)
++|.|||+
T Consensus 99 ~iD~lv~~ 106 (285)
T 2p91_A 99 SLDIIVHS 106 (285)
T ss_dssp CCCEEEEC
T ss_pred CCCEEEEC
Confidence 78999997
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.22 E-value=7.3e-11 Score=99.17 Aligned_cols=101 Identities=16% Similarity=0.142 Sum_probs=76.2
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCC-------------cccc------cccCCceEEEEccCCCHHH
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-------------RNAM------ESFGTYVESMAGDASNKKF 156 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~-------------~~a~------~~~g~~vevV~GDl~D~~s 156 (198)
...++++|||||+|+||++++++|+++|++|.++.|+. +... ...+..+.++.+|++|+++
T Consensus 8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 87 (277)
T 3tsc_A 8 KLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDR 87 (277)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred ccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence 35578999999999999999999999999999999842 1111 1124568999999999999
Q ss_pred HHHhhc-------CccEEEEcC-------------h-----------hH--HHHH----HHhCC-CCeEEEEccccee
Q 029118 157 LKTALR-------GVRSIICPS-------------E-----------GF--ISNA----GSLKG-VQHVILLSQGAVV 196 (198)
Q Consensus 157 L~~AL~-------GvDaVIh~a-------------~-----------G~--lldA----A~~~G-VkRiV~vSS~~Vy 196 (198)
++++++ .+|.+||++ + +. ++++ +++++ -.+||++||...+
T Consensus 88 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~ 165 (277)
T 3tsc_A 88 LRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGM 165 (277)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhC
Confidence 998875 589999972 0 11 2233 34444 5799999998664
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=99.22 E-value=3.9e-11 Score=99.46 Aligned_cols=101 Identities=9% Similarity=0.121 Sum_probs=79.2
Q ss_pred cCCCCeEEEEcCC--ChHHHHHHHHHHHCCCcEEEEEeCCccc-c-------cccCCceEEEEccCCCHHHHHHhhc---
Q 029118 96 EEARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKRNA-M-------ESFGTYVESMAGDASNKKFLKTALR--- 162 (198)
Q Consensus 96 ~~~~~~ILVTGAT--GfIG~~Vvr~Ll~~G~~VralvR~~~~a-~-------~~~g~~vevV~GDl~D~~sL~~AL~--- 162 (198)
+..++++|||||+ |+||++++++|+++|++|.++.|+.... . ...+..++++++|++|+++++++++
T Consensus 17 ~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 96 (267)
T 3gdg_A 17 SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVV 96 (267)
T ss_dssp CCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHH
T ss_pred CcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHH
Confidence 4567899999999 9999999999999999999999876543 1 1235678999999999999998875
Q ss_pred ----CccEEEEcC-------------h-----------hH--HHH----HHHhCCCCeEEEEccccee
Q 029118 163 ----GVRSIICPS-------------E-----------GF--ISN----AGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 163 ----GvDaVIh~a-------------~-----------G~--lld----AA~~~GVkRiV~vSS~~Vy 196 (198)
.+|.|||++ + ++ +++ ..++.+..+||++||...+
T Consensus 97 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~ 164 (267)
T 3gdg_A 97 ADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGH 164 (267)
T ss_dssp HHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGT
T ss_pred HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEcccccc
Confidence 569999972 0 11 233 3466778899999997643
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.22 E-value=6.9e-11 Score=102.06 Aligned_cols=76 Identities=12% Similarity=0.139 Sum_probs=63.0
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc------------cc------cccCCceEEEEccCCCHHH
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN------------AM------ESFGTYVESMAGDASNKKF 156 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~------------a~------~~~g~~vevV~GDl~D~~s 156 (198)
....++++|||||+|+||++++++|+++|++|.++.|+... .. ...+..+.++.+|++|+++
T Consensus 42 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~ 121 (317)
T 3oec_A 42 NRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLAS 121 (317)
T ss_dssp CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence 35667899999999999999999999999999999886321 10 1134578999999999999
Q ss_pred HHHhhc-------CccEEEEc
Q 029118 157 LKTALR-------GVRSIICP 170 (198)
Q Consensus 157 L~~AL~-------GvDaVIh~ 170 (198)
++++++ ++|.|||+
T Consensus 122 v~~~~~~~~~~~g~iD~lVnn 142 (317)
T 3oec_A 122 LQAVVDEALAEFGHIDILVSN 142 (317)
T ss_dssp HHHHHHHHHHHHSCCCEEEEC
T ss_pred HHHHHHHHHHHcCCCCEEEEC
Confidence 998886 78999997
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=99.22 E-value=4.5e-11 Score=100.28 Aligned_cols=100 Identities=13% Similarity=0.192 Sum_probs=76.8
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc---cc------cccCCceEEEEccCCCHHHHHHhhc----
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN---AM------ESFGTYVESMAGDASNKKFLKTALR---- 162 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~---a~------~~~g~~vevV~GDl~D~~sL~~AL~---- 162 (198)
+..++++|||||+|+||++++++|+++|++|.++.|.... .. ...+..+.++.+|++|+++++++++
T Consensus 8 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 87 (262)
T 3ksu_A 8 DLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEK 87 (262)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 4567899999999999999999999999999999875432 11 1124578999999999999998886
Q ss_pred ---CccEEEEcC-------------h-----------hH--HHHHHHhC--CCCeEEEEcccce
Q 029118 163 ---GVRSIICPS-------------E-----------GF--ISNAGSLK--GVQHVILLSQGAV 195 (198)
Q Consensus 163 ---GvDaVIh~a-------------~-----------G~--lldAA~~~--GVkRiV~vSS~~V 195 (198)
++|.+||++ + +. +++++... +-.+||++||...
T Consensus 88 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~ 151 (262)
T 3ksu_A 88 EFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLL 151 (262)
T ss_dssp HHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHH
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhh
Confidence 789999972 0 11 34555432 4579999999754
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.21 E-value=1.5e-10 Score=98.88 Aligned_cols=75 Identities=13% Similarity=0.187 Sum_probs=62.6
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCc------------ccc------cccCCceEEEEccCCCHHHH
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR------------NAM------ESFGTYVESMAGDASNKKFL 157 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~------------~a~------~~~g~~vevV~GDl~D~~sL 157 (198)
...++++|||||+|.||++++++|+++|++|.++.|++. ... ...+..+.++++|++|++++
T Consensus 25 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 104 (299)
T 3t7c_A 25 KVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAM 104 (299)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence 356789999999999999999999999999999998732 111 12356789999999999999
Q ss_pred HHhhc-------CccEEEEc
Q 029118 158 KTALR-------GVRSIICP 170 (198)
Q Consensus 158 ~~AL~-------GvDaVIh~ 170 (198)
.++++ ++|.+||+
T Consensus 105 ~~~~~~~~~~~g~iD~lv~n 124 (299)
T 3t7c_A 105 QAAVDDGVTQLGRLDIVLAN 124 (299)
T ss_dssp HHHHHHHHHHHSCCCEEEEC
T ss_pred HHHHHHHHHHhCCCCEEEEC
Confidence 98885 78999987
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=9.2e-11 Score=87.45 Aligned_cols=95 Identities=9% Similarity=0.082 Sum_probs=76.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHh-hcCccEEEEc-C-h-h
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICP-S-E-G 173 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~A-L~GvDaVIh~-a-~-G 173 (198)
.+++|+|+|+ |.+|+.+++.|.+.|++|+++.|++++.......+.+++.+|.+|++.+.++ +.++|.||++ . . .
T Consensus 5 ~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~ 83 (144)
T 2hmt_A 5 KNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANIQ 83 (144)
T ss_dssp -CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSCHH
T ss_pred cCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCchH
Confidence 4567999998 9999999999999999999999987655433333467889999999999887 8899999988 2 1 2
Q ss_pred ---HHHHHHHhCCCCeEEEEccc
Q 029118 174 ---FISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 174 ---~lldAA~~~GVkRiV~vSS~ 193 (198)
.+...+++.+++++|..++.
T Consensus 84 ~~~~~~~~~~~~~~~~ii~~~~~ 106 (144)
T 2hmt_A 84 ASTLTTLLLKELDIPNIWVKAQN 106 (144)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCS
T ss_pred HHHHHHHHHHHcCCCeEEEEeCC
Confidence 26677888899988877654
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=5.9e-11 Score=100.99 Aligned_cols=74 Identities=12% Similarity=0.063 Sum_probs=62.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEE-eCCccccc-------ccCCceEEEEccCCCHH-------------
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALV-KDKRNAME-------SFGTYVESMAGDASNKK------------- 155 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~Vralv-R~~~~a~~-------~~g~~vevV~GDl~D~~------------- 155 (198)
..++++|||||+|+||++++++|+++|++|.++. |+++.... ..+..+.++++|++|++
T Consensus 7 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 86 (291)
T 1e7w_A 7 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV 86 (291)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCB
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCccccccccccccccc
Confidence 4567999999999999999999999999999999 88754321 22557899999999999
Q ss_pred ----HHHHhhc-------CccEEEEc
Q 029118 156 ----FLKTALR-------GVRSIICP 170 (198)
Q Consensus 156 ----sL~~AL~-------GvDaVIh~ 170 (198)
++.++++ .+|.+||+
T Consensus 87 ~~~~~v~~~~~~~~~~~g~iD~lvnn 112 (291)
T 1e7w_A 87 TLFTRCAELVAACYTHWGRCDVLVNN 112 (291)
T ss_dssp CHHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred chHHHHHHHHHHHHHhcCCCCEEEEC
Confidence 8888775 78999997
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.19 E-value=6.6e-11 Score=102.96 Aligned_cols=74 Identities=12% Similarity=0.063 Sum_probs=62.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEE-eCCccccc-------ccCCceEEEEccCCCHH-------------
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALV-KDKRNAME-------SFGTYVESMAGDASNKK------------- 155 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~Vralv-R~~~~a~~-------~~g~~vevV~GDl~D~~------------- 155 (198)
..++++|||||+|+||++++++|+++|++|.++. |+++.... ..+..+.++.+|++|++
T Consensus 44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 123 (328)
T 2qhx_A 44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV 123 (328)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCB
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccccccc
Confidence 4567999999999999999999999999999999 88654321 22456899999999999
Q ss_pred ----HHHHhhc-------CccEEEEc
Q 029118 156 ----FLKTALR-------GVRSIICP 170 (198)
Q Consensus 156 ----sL~~AL~-------GvDaVIh~ 170 (198)
+++++++ ++|.|||+
T Consensus 124 ~~~~~v~~~~~~~~~~~g~iD~lVnn 149 (328)
T 2qhx_A 124 TLFTRCAELVAACYTHWGRCDVLVNN 149 (328)
T ss_dssp CHHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred ccHHHHHHHHHHHHHhcCCCCEEEEC
Confidence 8888876 78999997
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=8.9e-12 Score=108.44 Aligned_cols=94 Identities=13% Similarity=0.073 Sum_probs=69.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC-------cEEEEEeCCc--ccc----cccCCceEEEEccCCCHHHHHHhhcCcc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRT-------RIKALVKDKR--NAM----ESFGTYVESMAGDASNKKFLKTALRGVR 165 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~-------~VralvR~~~--~a~----~~~g~~vevV~GDl~D~~sL~~AL~GvD 165 (198)
.++|+||||+||||++++..|+.+|+ +|+++.+++. +.. ......+.++ +|+.+...+.++++|+|
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~-~di~~~~~~~~a~~~~D 82 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLL-AGLEATDDPKVAFKDAD 82 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTE-EEEEEESCHHHHTTTCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhccccccc-CCeEeccChHHHhCCCC
Confidence 35899999999999999999999996 8999887541 111 1111112333 68888788899999999
Q ss_pred EEEEcC------------------hhH--HHHHHHhCC-CC-eEEEEccc
Q 029118 166 SIICPS------------------EGF--ISNAGSLKG-VQ-HVILLSQG 193 (198)
Q Consensus 166 aVIh~a------------------~G~--lldAA~~~G-Vk-RiV~vSS~ 193 (198)
+|||++ .++ +++++++.+ ++ +||++|+.
T Consensus 83 ~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp 132 (327)
T 1y7t_A 83 YALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNP 132 (327)
T ss_dssp EEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred EEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCc
Confidence 999982 112 788998886 76 78887764
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.18 E-value=3.3e-11 Score=103.89 Aligned_cols=75 Identities=13% Similarity=0.141 Sum_probs=62.4
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeC----------Ccccc------cccCCceEEEEccCCCHHHHHH
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD----------KRNAM------ESFGTYVESMAGDASNKKFLKT 159 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~----------~~~a~------~~~g~~vevV~GDl~D~~sL~~ 159 (198)
...++++|||||+|+||++++++|+++|++|.++.|+ .+... ...+..+.++.+|++|++++.+
T Consensus 24 ~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~ 103 (322)
T 3qlj_A 24 VVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAG 103 (322)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHH
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence 3556799999999999999999999999999999987 22221 1124568899999999999998
Q ss_pred hhc-------CccEEEEc
Q 029118 160 ALR-------GVRSIICP 170 (198)
Q Consensus 160 AL~-------GvDaVIh~ 170 (198)
+++ ++|.|||+
T Consensus 104 ~~~~~~~~~g~iD~lv~n 121 (322)
T 3qlj_A 104 LIQTAVETFGGLDVLVNN 121 (322)
T ss_dssp HHHHHHHHHSCCCEEECC
T ss_pred HHHHHHHHcCCCCEEEEC
Confidence 886 88999997
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=8.8e-11 Score=98.55 Aligned_cols=74 Identities=9% Similarity=-0.025 Sum_probs=60.8
Q ss_pred CCCCeEEEEcCC--ChHHHHHHHHHHHCCCcEEEEEeCCc---ccccc--cCCceEEEEccCCCHHHHHHhhc-------
Q 029118 97 EARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKR---NAMES--FGTYVESMAGDASNKKFLKTALR------- 162 (198)
Q Consensus 97 ~~~~~ILVTGAT--GfIG~~Vvr~Ll~~G~~VralvR~~~---~a~~~--~g~~vevV~GDl~D~~sL~~AL~------- 162 (198)
..++++|||||+ |+||++++++|+++|++|.++.|+++ ...+. ....+.++.+|++|++++.++++
T Consensus 4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 83 (275)
T 2pd4_A 4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG 83 (275)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 346789999999 99999999999999999999999875 11111 11237899999999999998876
Q ss_pred CccEEEEc
Q 029118 163 GVRSIICP 170 (198)
Q Consensus 163 GvDaVIh~ 170 (198)
++|.|||+
T Consensus 84 ~id~lv~n 91 (275)
T 2pd4_A 84 SLDFIVHS 91 (275)
T ss_dssp CEEEEEEC
T ss_pred CCCEEEEC
Confidence 67999997
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=8.9e-11 Score=97.34 Aligned_cols=73 Identities=12% Similarity=0.124 Sum_probs=60.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHH---CCCcEEEEEeCCcccccc---c-----CCceEEEEccCCCHHHHHHhhc----
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIV---KRTRIKALVKDKRNAMES---F-----GTYVESMAGDASNKKFLKTALR---- 162 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~---~G~~VralvR~~~~a~~~---~-----g~~vevV~GDl~D~~sL~~AL~---- 162 (198)
.++++|||||+|+||++++++|++ +|++|.++.|+++..... . +..+.++.+|++|+++++++++
T Consensus 5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 84 (259)
T 1oaa_A 5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE 84 (259)
T ss_dssp BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHh
Confidence 457899999999999999999999 899999999987543221 1 4568999999999999888764
Q ss_pred -----Ccc--EEEEc
Q 029118 163 -----GVR--SIICP 170 (198)
Q Consensus 163 -----GvD--aVIh~ 170 (198)
.+| .|||+
T Consensus 85 ~~~~g~~d~~~lvnn 99 (259)
T 1oaa_A 85 LPRPEGLQRLLLINN 99 (259)
T ss_dssp SCCCTTCCEEEEEEC
T ss_pred ccccccCCccEEEEC
Confidence 357 88886
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=1.9e-10 Score=96.92 Aligned_cols=77 Identities=12% Similarity=0.044 Sum_probs=62.5
Q ss_pred cccCCCCeEEEEcCCCh--HHHHHHHHHHHCCCcEEEEEeCC--cccccc--cCCceEEEEccCCCHHHHHHhhc-----
Q 029118 94 FPEEARDAVLVTDGDSD--IGQMVILSLIVKRTRIKALVKDK--RNAMES--FGTYVESMAGDASNKKFLKTALR----- 162 (198)
Q Consensus 94 ~~~~~~~~ILVTGATGf--IG~~Vvr~Ll~~G~~VralvR~~--~~a~~~--~g~~vevV~GDl~D~~sL~~AL~----- 162 (198)
.....++++|||||+|+ ||++++++|+++|++|.++.|+. +...+. ....+.++.+|++|+++++++++
T Consensus 21 M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 100 (280)
T 3nrc_A 21 MGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKV 100 (280)
T ss_dssp -CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHH
Confidence 44566789999999988 99999999999999999999987 222111 12358999999999999998875
Q ss_pred --CccEEEEc
Q 029118 163 --GVRSIICP 170 (198)
Q Consensus 163 --GvDaVIh~ 170 (198)
.+|.|||+
T Consensus 101 ~g~id~li~n 110 (280)
T 3nrc_A 101 WDGLDAIVHS 110 (280)
T ss_dssp CSSCCEEEEC
T ss_pred cCCCCEEEEC
Confidence 56999997
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.15 E-value=9.9e-11 Score=98.78 Aligned_cols=74 Identities=19% Similarity=0.228 Sum_probs=59.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCc-ccc------cccCCceEEEEccCCCHHHHHHhhc-------
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-NAM------ESFGTYVESMAGDASNKKFLKTALR------- 162 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~-~a~------~~~g~~vevV~GDl~D~~sL~~AL~------- 162 (198)
..++++|||||+|+||++++++|+++|++|.+..++.. ... ...+..+.++++|++|+++++++++
T Consensus 25 ~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 104 (267)
T 3u5t_A 25 ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFG 104 (267)
T ss_dssp --CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 34678999999999999999999999999999865443 221 1235678999999999999998886
Q ss_pred CccEEEEc
Q 029118 163 GVRSIICP 170 (198)
Q Consensus 163 GvDaVIh~ 170 (198)
++|.+||+
T Consensus 105 ~iD~lvnn 112 (267)
T 3u5t_A 105 GVDVLVNN 112 (267)
T ss_dssp CEEEEEEC
T ss_pred CCCEEEEC
Confidence 78999997
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.14 E-value=5.4e-11 Score=96.78 Aligned_cols=59 Identities=19% Similarity=0.230 Sum_probs=53.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc---CccEEEEc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR---GVRSIICP 170 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~---GvDaVIh~ 170 (198)
.++++|||||+|+||++++++|.++|++|.++.|+.+ +|++|+++++++++ .+|.+||+
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~--------------~D~~~~~~v~~~~~~~g~id~lv~n 66 (223)
T 3uce_A 5 DKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG--------------LDISDEKSVYHYFETIGAFDHLIVT 66 (223)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT--------------CCTTCHHHHHHHHHHHCSEEEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc--------------cCCCCHHHHHHHHHHhCCCCEEEEC
Confidence 4678999999999999999999999999999988654 79999999998885 78999997
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=1.9e-10 Score=98.29 Aligned_cols=75 Identities=4% Similarity=-0.106 Sum_probs=61.8
Q ss_pred cCCCCeEEEEcCCCh--HHHHHHHHHHHCCCcEEEEEeCCcccc---cc--cCCceEEEEccCCCHHHHHHhhc------
Q 029118 96 EEARDAVLVTDGDSD--IGQMVILSLIVKRTRIKALVKDKRNAM---ES--FGTYVESMAGDASNKKFLKTALR------ 162 (198)
Q Consensus 96 ~~~~~~ILVTGATGf--IG~~Vvr~Ll~~G~~VralvR~~~~a~---~~--~g~~vevV~GDl~D~~sL~~AL~------ 162 (198)
...++++|||||+|+ ||++++++|+++|++|.++.|+.+... +. ....+.++.+|++|+++++++++
T Consensus 28 ~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 107 (293)
T 3grk_A 28 LLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKW 107 (293)
T ss_dssp TTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred cCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhc
Confidence 456789999999999 999999999999999999999853211 11 11358899999999999998885
Q ss_pred -CccEEEEc
Q 029118 163 -GVRSIICP 170 (198)
Q Consensus 163 -GvDaVIh~ 170 (198)
++|.+||+
T Consensus 108 g~iD~lVnn 116 (293)
T 3grk_A 108 GKLDFLVHA 116 (293)
T ss_dssp SCCSEEEEC
T ss_pred CCCCEEEEC
Confidence 78999997
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=8e-11 Score=98.11 Aligned_cols=74 Identities=9% Similarity=0.018 Sum_probs=60.0
Q ss_pred CCCCeEEEEcCC--ChHHHHHHHHHHHCCCcEEEEEeCCcc---cccc--cCCceEEEEccCCCHHHHHHhhc-------
Q 029118 97 EARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKRN---AMES--FGTYVESMAGDASNKKFLKTALR------- 162 (198)
Q Consensus 97 ~~~~~ILVTGAT--GfIG~~Vvr~Ll~~G~~VralvR~~~~---a~~~--~g~~vevV~GDl~D~~sL~~AL~------- 162 (198)
..++++|||||+ |+||++++++|+++|++|.++.|++.. ..+. ......++++|++|+++++++++
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP 86 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 345789999999 999999999999999999999998721 1111 11235789999999999998886
Q ss_pred CccEEEEc
Q 029118 163 GVRSIICP 170 (198)
Q Consensus 163 GvDaVIh~ 170 (198)
++|.|||+
T Consensus 87 ~iD~lv~~ 94 (265)
T 1qsg_A 87 KFDGFVHS 94 (265)
T ss_dssp SEEEEEEC
T ss_pred CCCEEEEC
Confidence 78999997
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=3e-10 Score=96.98 Aligned_cols=74 Identities=3% Similarity=-0.023 Sum_probs=61.0
Q ss_pred CCCCeEEEEcCCC--hHHHHHHHHHHHCCCcEEEEEeCCccccc---c--cCCceEEEEccCCCHHHHHHhhc-------
Q 029118 97 EARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKRNAME---S--FGTYVESMAGDASNKKFLKTALR------- 162 (198)
Q Consensus 97 ~~~~~ILVTGATG--fIG~~Vvr~Ll~~G~~VralvR~~~~a~~---~--~g~~vevV~GDl~D~~sL~~AL~------- 162 (198)
..++++|||||+| +||++++++|+++|++|.++.|+.+.... . ....+.++++|++|+++++++++
T Consensus 28 l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 107 (296)
T 3k31_A 28 MEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWG 107 (296)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4567899999998 99999999999999999999998643211 1 11347899999999999998885
Q ss_pred CccEEEEc
Q 029118 163 GVRSIICP 170 (198)
Q Consensus 163 GvDaVIh~ 170 (198)
++|.+||+
T Consensus 108 ~iD~lVnn 115 (296)
T 3k31_A 108 SLDFVVHA 115 (296)
T ss_dssp CCSEEEEC
T ss_pred CCCEEEEC
Confidence 67999997
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.13 E-value=1.6e-10 Score=95.33 Aligned_cols=77 Identities=8% Similarity=-0.040 Sum_probs=63.5
Q ss_pred cccCCCCeEEEEcCC--ChHHHHHHHHHHHCCCcEEEEEeCCcccc---c--ccCCceEEEEccCCCHHHHHHhhc----
Q 029118 94 FPEEARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKRNAM---E--SFGTYVESMAGDASNKKFLKTALR---- 162 (198)
Q Consensus 94 ~~~~~~~~ILVTGAT--GfIG~~Vvr~Ll~~G~~VralvR~~~~a~---~--~~g~~vevV~GDl~D~~sL~~AL~---- 162 (198)
.....+++||||||+ |+||++++++|+++|++|.++.|+..... + .....+.++.+|++|+++++++++
T Consensus 9 ~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 88 (271)
T 3ek2_A 9 MGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKT 88 (271)
T ss_dssp CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred ccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHH
Confidence 456678899999999 99999999999999999999999853221 1 112358899999999999998886
Q ss_pred ---CccEEEEc
Q 029118 163 ---GVRSIICP 170 (198)
Q Consensus 163 ---GvDaVIh~ 170 (198)
.+|.|||+
T Consensus 89 ~~g~id~lv~n 99 (271)
T 3ek2_A 89 HWDSLDGLVHS 99 (271)
T ss_dssp HCSCEEEEEEC
T ss_pred HcCCCCEEEEC
Confidence 67999997
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.13 E-value=1.6e-10 Score=94.72 Aligned_cols=100 Identities=16% Similarity=0.124 Sum_probs=74.0
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEe-CCcccc------cccCCceEEEEccCCCHHHHHHhhcC------
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK-DKRNAM------ESFGTYVESMAGDASNKKFLKTALRG------ 163 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR-~~~~a~------~~~g~~vevV~GDl~D~~sL~~AL~G------ 163 (198)
..++++|||||+|+||++++++|+++|++|.++.+ +.+... ...+..+.++.+|++|++.++++++.
T Consensus 5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 84 (255)
T 3icc_A 5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ 84 (255)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhc
Confidence 34678999999999999999999999999998754 443321 11245688999999999998887743
Q ss_pred -------ccEEEEcC-------------h-----------hH--HHHHHHhC--CCCeEEEEccccee
Q 029118 164 -------VRSIICPS-------------E-----------GF--ISNAGSLK--GVQHVILLSQGAVV 196 (198)
Q Consensus 164 -------vDaVIh~a-------------~-----------G~--lldAA~~~--GVkRiV~vSS~~Vy 196 (198)
+|.|||++ . +. +++++... +-.+||++||...+
T Consensus 85 ~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~ 152 (255)
T 3icc_A 85 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATR 152 (255)
T ss_dssp HHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGT
T ss_pred ccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhc
Confidence 89999972 0 11 34444332 34689999997654
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=99.10 E-value=3.9e-10 Score=85.55 Aligned_cols=93 Identities=16% Similarity=0.160 Sum_probs=72.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHh-hcCccEEEEcC--h-h
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPS--E-G 173 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~A-L~GvDaVIh~a--~-G 173 (198)
.+++|+|+|+ |++|+++++.|.++|++|+++.|+++........+++++.+|.+|++.+.++ ++++|+||.+. . .
T Consensus 5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~~~~ 83 (141)
T 3llv_A 5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGSDDEF 83 (141)
T ss_dssp -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCSCHHH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecCCHHH
Confidence 3568999998 9999999999999999999999998765443334688999999999999987 57899999872 1 1
Q ss_pred H--HHHHHHhCCCCeEEEEc
Q 029118 174 F--ISNAGSLKGVQHVILLS 191 (198)
Q Consensus 174 ~--lldAA~~~GVkRiV~vS 191 (198)
+ +...+++.+..++|-..
T Consensus 84 n~~~~~~a~~~~~~~iia~~ 103 (141)
T 3llv_A 84 NLKILKALRSVSDVYAIVRV 103 (141)
T ss_dssp HHHHHHHHHHHCCCCEEEEE
T ss_pred HHHHHHHHHHhCCceEEEEE
Confidence 2 55666666666665443
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=99.10 E-value=9.5e-10 Score=94.07 Aligned_cols=99 Identities=15% Similarity=0.153 Sum_probs=80.6
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhh---cCccEEEEcC--
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL---RGVRSIICPS-- 171 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL---~GvDaVIh~a-- 171 (198)
..++++|||||++.||+.++++|.++|++|.+..|+.+......+..+..+++|++|++++++++ ..+|.+|+.+
T Consensus 9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNNAGi 88 (242)
T 4b79_A 9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPRHPRIRREELDITDSQRLQRLFEALPRLDVLVNNAGI 88 (242)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCCCTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhhcCCeEEEEecCCCHHHHHHHHHhcCCCCEEEECCCC
Confidence 36899999999999999999999999999999999988766666678999999999999998876 4689999872
Q ss_pred --------------------hhH------HHHHHHhCCCCeEEEEccccee
Q 029118 172 --------------------EGF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 172 --------------------~G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
.+. ++..+++.+ .+||.+||....
T Consensus 89 ~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~ 138 (242)
T 4b79_A 89 SRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRG-GSILNIASMYST 138 (242)
T ss_dssp CCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-EEEEEECCGGGT
T ss_pred CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEeecccc
Confidence 011 233344555 899999997643
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=99.10 E-value=1e-10 Score=97.05 Aligned_cols=96 Identities=13% Similarity=0.067 Sum_probs=65.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-----cCCceEEEEccCCCHHHHHHh----hcCccEEEE
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTA----LRGVRSIIC 169 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-----~g~~vevV~GDl~D~~sL~~A----L~GvDaVIh 169 (198)
++++|||||+|+||++++++|+++|++|.++.|++++.... .+..+..+ |..+...+.+. +.++|.|||
T Consensus 1 Mk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~--d~~~v~~~~~~~~~~~g~iD~lv~ 78 (254)
T 1zmt_A 1 MSTAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPM--SEQEPAELIEAVTSAYGQVDVLVS 78 (254)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEEC--CCCSHHHHHHHHHHHHSCCCEEEE
T ss_pred CeEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEE--CHHHHHHHHHHHHHHhCCCCEEEE
Confidence 36799999999999999999999999999999987653221 13334443 55444333222 248999999
Q ss_pred cC--h-----------------------hH--H----HHHHHhCCCCeEEEEccccee
Q 029118 170 PS--E-----------------------GF--I----SNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 170 ~a--~-----------------------G~--l----ldAA~~~GVkRiV~vSS~~Vy 196 (198)
++ . +. + +..+++++..|||++||...+
T Consensus 79 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 136 (254)
T 1zmt_A 79 NDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPF 136 (254)
T ss_dssp ECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTT
T ss_pred CCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccc
Confidence 72 0 11 2 233446678999999997654
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.09 E-value=9.4e-11 Score=96.43 Aligned_cols=98 Identities=16% Similarity=0.135 Sum_probs=65.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccccc-CCceEEEEccCCCHHHHH---Hh---hcCccEEEEc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLK---TA---LRGVRSIICP 170 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~-g~~vevV~GDl~D~~sL~---~A---L~GvDaVIh~ 170 (198)
.++++|||||+|+||++++++|.+ |+.|.++.|+++...... ..+++++.+|++|..... ++ +.++|.|||+
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~lv~~ 82 (245)
T 3e9n_A 4 KKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAEIEGVEPIESDIVKEVLEEGGVDKLKNLDHVDTLVHA 82 (245)
T ss_dssp --CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHTSTTEEEEECCHHHHHHTSSSCGGGTTCSCCSEEEEC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHhhcCCcceecccchHHHHHHHHHHHHhcCCCCEEEEC
Confidence 467899999999999999999976 999999999876543221 245899999999885521 12 2378999997
Q ss_pred C-------------h-----------hH------HHHHHHhCCCCeEEEEcccceec
Q 029118 171 S-------------E-----------GF------ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 171 a-------------~-----------G~------lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
+ + +. ++..+++.+ .+||++||...+.
T Consensus 83 Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~ 138 (245)
T 3e9n_A 83 AAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNG 138 (245)
T ss_dssp C----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC------
T ss_pred CCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCccccc
Confidence 2 0 11 223334445 8999999987653
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=99.08 E-value=5.8e-10 Score=82.92 Aligned_cols=93 Identities=18% Similarity=0.141 Sum_probs=73.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccccc-CCceEEEEccCCCHHHHHHh-hcCccEEEEcC--hh-
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTA-LRGVRSIICPS--EG- 173 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~-g~~vevV~GDl~D~~sL~~A-L~GvDaVIh~a--~G- 173 (198)
.++|+|+|+ |++|+++++.|.++|++|+++.|+++...... ..+++++.+|..+++.+.++ ++++|.||++. ..
T Consensus 4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~ 82 (140)
T 1lss_A 4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEEV 82 (140)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCchH
Confidence 468999987 99999999999999999999999876543322 12477899999999998866 78999999882 21
Q ss_pred --HHHHHHHhCCCCeEEEEcc
Q 029118 174 --FISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 174 --~lldAA~~~GVkRiV~vSS 192 (198)
.+.++++..+++++|..++
T Consensus 83 ~~~~~~~~~~~~~~~ii~~~~ 103 (140)
T 1lss_A 83 NLMSSLLAKSYGINKTIARIS 103 (140)
T ss_dssp HHHHHHHHHHTTCCCEEEECS
T ss_pred HHHHHHHHHHcCCCEEEEEec
Confidence 2567788888888887654
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=99.06 E-value=1.3e-09 Score=84.31 Aligned_cols=91 Identities=18% Similarity=0.258 Sum_probs=70.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCC-cc---cccccCCceEEEEccCCCHHHHHHh-hcCccEEEEcC--
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RN---AMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPS-- 171 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~-~~---a~~~~g~~vevV~GDl~D~~sL~~A-L~GvDaVIh~a-- 171 (198)
+++|+|+|+ |.+|+++++.|.+.|++|+++.|++ +. .......+++++.||.+|++.+.++ ++++|+||.+.
T Consensus 3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~ 81 (153)
T 1id1_A 3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDN 81 (153)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSC
T ss_pred CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecCC
Confidence 467999996 9999999999999999999999975 32 2222345689999999999999988 99999999882
Q ss_pred hh-H--HHHHHHhC-CCCeEEEE
Q 029118 172 EG-F--ISNAGSLK-GVQHVILL 190 (198)
Q Consensus 172 ~G-~--lldAA~~~-GVkRiV~v 190 (198)
.. + +...|++. +..++|-.
T Consensus 82 d~~n~~~~~~a~~~~~~~~ii~~ 104 (153)
T 1id1_A 82 DADNAFVVLSAKDMSSDVKTVLA 104 (153)
T ss_dssp HHHHHHHHHHHHHHTSSSCEEEE
T ss_pred hHHHHHHHHHHHHHCCCCEEEEE
Confidence 11 1 44555554 66666653
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=99.05 E-value=3.4e-09 Score=82.22 Aligned_cols=97 Identities=13% Similarity=0.130 Sum_probs=77.2
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccccc-CCceEEEEccCCCHHHHHHh-hcCccEEEEcC--
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTA-LRGVRSIICPS-- 171 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~-g~~vevV~GDl~D~~sL~~A-L~GvDaVIh~a-- 171 (198)
..+.++|+|+|+ |.+|+.+++.|.+.|++|+++.|++++..... ..++.++.+|..+++.+.++ ++++|+||.+.
T Consensus 16 ~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~ 94 (155)
T 2g1u_A 16 KQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTND 94 (155)
T ss_dssp -CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSSC
T ss_pred ccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeCC
Confidence 456778999996 99999999999999999999999987765443 34577889999999998887 89999999882
Q ss_pred hh---HHHHHHHh-CCCCeEEEEccc
Q 029118 172 EG---FISNAGSL-KGVQHVILLSQG 193 (198)
Q Consensus 172 ~G---~lldAA~~-~GVkRiV~vSS~ 193 (198)
.. .+.+.++. .+..++|...+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~iv~~~~~ 120 (155)
T 2g1u_A 95 DSTNFFISMNARYMFNVENVIARVYD 120 (155)
T ss_dssp HHHHHHHHHHHHHTSCCSEEEEECSS
T ss_pred cHHHHHHHHHHHHHCCCCeEEEEECC
Confidence 22 25666776 788888876653
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=99.03 E-value=8.6e-10 Score=102.63 Aligned_cols=96 Identities=23% Similarity=0.307 Sum_probs=76.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCccc---c------cccCCceEEEEccCCCHHHHHHhhc------
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNA---M------ESFGTYVESMAGDASNKKFLKTALR------ 162 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a---~------~~~g~~vevV~GDl~D~~sL~~AL~------ 162 (198)
++++|||||+|.||++++++|.++|+ .|.++.|+.... . ...+..+.++.+|++|++++.++++
T Consensus 239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g 318 (496)
T 3mje_A 239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPEDA 318 (496)
T ss_dssp CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTTS
T ss_pred CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHhC
Confidence 37999999999999999999999999 677777763221 1 1235679999999999999999986
Q ss_pred CccEEEEcC-------------------------hhH--HHHHHHhCCCCeEEEEcccc
Q 029118 163 GVRSIICPS-------------------------EGF--ISNAGSLKGVQHVILLSQGA 194 (198)
Q Consensus 163 GvDaVIh~a-------------------------~G~--lldAA~~~GVkRiV~vSS~~ 194 (198)
.+|.|||++ .|+ +.+++...+..+||++||.+
T Consensus 319 ~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a 377 (496)
T 3mje_A 319 PLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGA 377 (496)
T ss_dssp CEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHH
T ss_pred CCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChH
Confidence 479999972 011 56777788899999999964
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=2.5e-09 Score=91.36 Aligned_cols=96 Identities=14% Similarity=0.197 Sum_probs=75.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc--cCCceEEEEccCCCHHHHHHhh-------cCccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--FGTYVESMAGDASNKKFLKTAL-------RGVRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~--~g~~vevV~GDl~D~~sL~~AL-------~GvDaVIh~ 170 (198)
++||||||++.||+.++++|.++|++|.+..|+.+...+. ...++..+++|++|++++++++ ..+|.+|+.
T Consensus 3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVNN 82 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVNN 82 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 6899999999999999999999999999999987654322 2456889999999999988876 478999986
Q ss_pred C------------------------hhH------HHHHHHhCCCCeEEEEccccee
Q 029118 171 S------------------------EGF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 171 a------------------------~G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
+ .+. ++..+++.+ .+||.+||...+
T Consensus 83 AG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-G~IInisS~~~~ 137 (247)
T 3ged_A 83 ACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNK-GRIINIASTRAF 137 (247)
T ss_dssp CCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGT
T ss_pred CCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CcEEEEeecccc
Confidence 2 011 233445555 799999997654
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=99.01 E-value=2.2e-09 Score=91.97 Aligned_cols=102 Identities=15% Similarity=0.120 Sum_probs=81.8
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc------cccCCceEEEEccCCCHHHHHHhh-------
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM------ESFGTYVESMAGDASNKKFLKTAL------- 161 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~------~~~g~~vevV~GDl~D~~sL~~AL------- 161 (198)
.+..++++|||||++.||+.++++|.++|++|.+..|+.++.. ...+..+..+++|++|++++++++
T Consensus 3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 82 (254)
T 4fn4_A 3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETY 82 (254)
T ss_dssp GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4577899999999999999999999999999999999876542 124567899999999999998876
Q ss_pred cCccEEEEcC-------------------------hhH------HHHHHHhCCCCeEEEEccccee
Q 029118 162 RGVRSIICPS-------------------------EGF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 162 ~GvDaVIh~a-------------------------~G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
..+|.+|+.+ .+. ++..+++++-.+||.+||....
T Consensus 83 G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~ 148 (254)
T 4fn4_A 83 SRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGI 148 (254)
T ss_dssp SCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhc
Confidence 3689999862 011 3455666777899999997653
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=99.01 E-value=1.2e-09 Score=101.79 Aligned_cols=99 Identities=14% Similarity=0.131 Sum_probs=74.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEE--EeCCcc-------------cc------cccCCceEEEEccCCCHH
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKAL--VKDKRN-------------AM------ESFGTYVESMAGDASNKK 155 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~Vral--vR~~~~-------------a~------~~~g~~vevV~GDl~D~~ 155 (198)
.+++++|||||+|.||.+++++|.++|+++.++ .|++.+ .. ...+..+.++.+|++|++
T Consensus 249 ~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~ 328 (525)
T 3qp9_A 249 QADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAE 328 (525)
T ss_dssp CTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHH
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHH
Confidence 356799999999999999999999999985555 576421 11 123567999999999999
Q ss_pred HHHHhhcC------ccEEEEcC------------------------hhH--HHHHHHhCC-----CCeEEEEcccce
Q 029118 156 FLKTALRG------VRSIICPS------------------------EGF--ISNAGSLKG-----VQHVILLSQGAV 195 (198)
Q Consensus 156 sL~~AL~G------vDaVIh~a------------------------~G~--lldAA~~~G-----VkRiV~vSS~~V 195 (198)
++.++++. +|.|||++ .|+ +.+++.... ..+||++||++.
T Consensus 329 ~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~ 405 (525)
T 3qp9_A 329 AAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAA 405 (525)
T ss_dssp HHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGG
T ss_pred HHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHH
Confidence 99999865 59999982 011 445554444 899999999754
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=98.96 E-value=1.3e-09 Score=99.83 Aligned_cols=100 Identities=14% Similarity=0.032 Sum_probs=75.7
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc--ccc-cCCceEEEEccCCCHHHHHHhhc-------C-c
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA--MES-FGTYVESMAGDASNKKFLKTALR-------G-V 164 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a--~~~-~g~~vevV~GDl~D~~sL~~AL~-------G-v 164 (198)
...++++|||||+|.||++++++|.++|++|.++.|+.... .+. ...+++++.+|++|+++++++++ + +
T Consensus 210 ~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~i 289 (454)
T 3u0b_A 210 PLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKV 289 (454)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTCC
T ss_pred CCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCCc
Confidence 34678999999999999999999999999999998865321 111 11246899999999999988874 4 9
Q ss_pred cEEEEcC------------------------hhH--HHHHHHhC----CCCeEEEEcccce
Q 029118 165 RSIICPS------------------------EGF--ISNAGSLK----GVQHVILLSQGAV 195 (198)
Q Consensus 165 DaVIh~a------------------------~G~--lldAA~~~----GVkRiV~vSS~~V 195 (198)
|.|||++ .|+ +.+++... +..+||++||.+.
T Consensus 290 d~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~ 350 (454)
T 3u0b_A 290 DILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAG 350 (454)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHH
T ss_pred eEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHh
Confidence 9999982 011 44555443 7789999999754
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=98.96 E-value=1.3e-09 Score=91.10 Aligned_cols=74 Identities=12% Similarity=0.091 Sum_probs=62.9
Q ss_pred CCCCeEEEEcC--CChHHHHHHHHHHHCCCcEEEEEeCCccc-c---cccCCceEEEEccCCCHHHHHHhhc--------
Q 029118 97 EARDAVLVTDG--DSDIGQMVILSLIVKRTRIKALVKDKRNA-M---ESFGTYVESMAGDASNKKFLKTALR-------- 162 (198)
Q Consensus 97 ~~~~~ILVTGA--TGfIG~~Vvr~Ll~~G~~VralvR~~~~a-~---~~~g~~vevV~GDl~D~~sL~~AL~-------- 162 (198)
..++++||||| +|+||++++++|+++|++|.++.|++++. . ...+..+.++.+|++|+++++++++
T Consensus 5 l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 84 (269)
T 2h7i_A 5 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGA 84 (269)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCT
T ss_pred cCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 35678999999 99999999999999999999999987542 1 2234568899999999999998886
Q ss_pred --CccEEEEc
Q 029118 163 --GVRSIICP 170 (198)
Q Consensus 163 --GvDaVIh~ 170 (198)
++|.|||+
T Consensus 85 ~~~iD~lv~n 94 (269)
T 2h7i_A 85 GNKLDGVVHS 94 (269)
T ss_dssp TCCEEEEEEC
T ss_pred CCCceEEEEC
Confidence 79999997
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=9.5e-10 Score=95.60 Aligned_cols=97 Identities=10% Similarity=0.067 Sum_probs=68.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEe---------CCcccccc---c-CCceEEEEccCCCHHHHHHhh--
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK---------DKRNAMES---F-GTYVESMAGDASNKKFLKTAL-- 161 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR---------~~~~a~~~---~-g~~vevV~GDl~D~~sL~~AL-- 161 (198)
..++++|||||+|+||++++++|+++|++|++..| +.++.... + .... .+.+|++|.+++++++
T Consensus 7 l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~-~~~~D~~~~~~~~~~~~~ 85 (319)
T 1gz6_A 7 FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG-KAVANYDSVEAGEKLVKT 85 (319)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTC-EEEEECCCGGGHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCC-eEEEeCCCHHHHHHHHHH
Confidence 45689999999999999999999999999999754 44332111 1 0111 2458999998776654
Q ss_pred -----cCccEEEEcC-------------h-----------hH------HHHHHHhCCCCeEEEEcccc
Q 029118 162 -----RGVRSIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQGA 194 (198)
Q Consensus 162 -----~GvDaVIh~a-------------~-----------G~------lldAA~~~GVkRiV~vSS~~ 194 (198)
..+|.|||++ . |. ++..+++.+..|||++||.+
T Consensus 86 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~ 153 (319)
T 1gz6_A 86 ALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASAS 153 (319)
T ss_dssp HHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHH
T ss_pred HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChh
Confidence 3789999972 0 11 23334567889999999964
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=98.92 E-value=8.6e-09 Score=88.12 Aligned_cols=97 Identities=11% Similarity=0.085 Sum_probs=76.3
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc-------CccEE
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~-------GvDaV 167 (198)
-+..++++|||||++.||+.++++|.++|++|.+..|+..... .....+++|++|+++++++++ ++|.+
T Consensus 7 ~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDil 82 (261)
T 4h15_A 7 LNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEGL----PEELFVEADLTTKEGCAIVAEATRQRLGGVDVI 82 (261)
T ss_dssp CCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTTS----CTTTEEECCTTSHHHHHHHHHHHHHHTSSCSEE
T ss_pred cCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhCC----CcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 3678899999999999999999999999999999999764321 223478999999999887763 68999
Q ss_pred EEcC--------------------------hhH------HHHHHHhCCCCeEEEEcccce
Q 029118 168 ICPS--------------------------EGF------ISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 168 Ih~a--------------------------~G~------lldAA~~~GVkRiV~vSS~~V 195 (198)
|+.+ .+. ++..+++++-.+||++||...
T Consensus 83 VnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~ 142 (261)
T 4h15_A 83 VHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQR 142 (261)
T ss_dssp EECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred EECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhh
Confidence 9861 011 344556777789999999754
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=98.91 E-value=1.2e-08 Score=87.24 Aligned_cols=99 Identities=11% Similarity=0.135 Sum_probs=77.6
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc-----cccCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-----ESFGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~-----~~~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
+..++++|||||++.||+.++++|.++|++|.+..|+.+... ...+..+.++.+|++|+++++++++ .
T Consensus 4 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~ 83 (258)
T 4gkb_A 4 NLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGR 83 (258)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 467899999999999999999999999999999999876421 1235678999999999999887763 6
Q ss_pred ccEEEEcC-----------------------hhH------HHHHHHhCCCCeEEEEcccce
Q 029118 164 VRSIICPS-----------------------EGF------ISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 164 vDaVIh~a-----------------------~G~------lldAA~~~GVkRiV~vSS~~V 195 (198)
+|.+|+.+ .+. ++..+++.+ .+||.+||...
T Consensus 84 iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~ 143 (258)
T 4gkb_A 84 LDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATR-GAIVNISSKTA 143 (258)
T ss_dssp CCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTHH
T ss_pred CCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEeehhh
Confidence 89999872 011 233344445 79999999754
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=98.87 E-value=6.5e-10 Score=91.70 Aligned_cols=95 Identities=13% Similarity=0.036 Sum_probs=64.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEE-E--eCCcccccc---cCCceEEEEccCCCHHHHHHh----hcCccEEE
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-V--KDKRNAMES---FGTYVESMAGDASNKKFLKTA----LRGVRSII 168 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~Vral-v--R~~~~a~~~---~g~~vevV~GDl~D~~sL~~A----L~GvDaVI 168 (198)
++++|||||+|+||++++++|+++|++|.++ . |++++.... + .+.++. |..+...+.+. +.++|.||
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~-~~~~~~--~~~~v~~~~~~~~~~~g~iD~lv 77 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN-PGTIAL--AEQKPERLVDATLQHGEAIDTIV 77 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS-TTEEEC--CCCCGGGHHHHHGGGSSCEEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh-CCCccc--CHHHHHHHHHHHHHHcCCCCEEE
Confidence 3689999999999999999999999999999 6 987554321 2 123332 44444333322 23789999
Q ss_pred EcC----h---h--------------------H--H----HHHHHhCCCCeEEEEccccee
Q 029118 169 CPS----E---G--------------------F--I----SNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 169 h~a----~---G--------------------~--l----ldAA~~~GVkRiV~vSS~~Vy 196 (198)
|++ . + . + +..+++++..|||++||...+
T Consensus 78 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~ 138 (244)
T 1zmo_A 78 SNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGK 138 (244)
T ss_dssp ECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGT
T ss_pred ECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhC
Confidence 972 1 1 0 2 233446788999999998664
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.86 E-value=9.9e-09 Score=81.10 Aligned_cols=92 Identities=12% Similarity=0.085 Sum_probs=72.0
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHC-CCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHh--hcCccEEEEcC--
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA--LRGVRSIICPS-- 171 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~-G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~A--L~GvDaVIh~a-- 171 (198)
..+++|+|.| .|.+|+.+++.|.+. |++|+++.|++++.......+++++.||.+|++.+.++ ++++|.||.+.
T Consensus 37 ~~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~~ 115 (183)
T 3c85_A 37 PGHAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMPH 115 (183)
T ss_dssp CTTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCSS
T ss_pred CCCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCCC
Confidence 4466899998 599999999999999 99999999998765443334578899999999999998 89999999872
Q ss_pred hh---HHHHHHHhCC-CCeEEE
Q 029118 172 EG---FISNAGSLKG-VQHVIL 189 (198)
Q Consensus 172 ~G---~lldAA~~~G-VkRiV~ 189 (198)
.. .++..++..+ ..++|.
T Consensus 116 ~~~~~~~~~~~~~~~~~~~ii~ 137 (183)
T 3c85_A 116 HQGNQTALEQLQRRNYKGQIAA 137 (183)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEE
T ss_pred hHHHHHHHHHHHHHCCCCEEEE
Confidence 11 2556667666 445544
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.85 E-value=9.4e-09 Score=88.13 Aligned_cols=101 Identities=13% Similarity=0.044 Sum_probs=78.6
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc------cccCCceEEEEccCCCHHHHHHhhc-------
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM------ESFGTYVESMAGDASNKKFLKTALR------- 162 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~------~~~g~~vevV~GDl~D~~sL~~AL~------- 162 (198)
+..++++|||||++.||+.++++|.++|++|.+..|+.+... ...+..+..+++|++|+++++++++
T Consensus 6 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 85 (255)
T 4g81_D 6 DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGI 85 (255)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence 467899999999999999999999999999999999876432 1235678899999999999988763
Q ss_pred CccEEEEcC------------------------hhH------HHHHHH-hCCCCeEEEEccccee
Q 029118 163 GVRSIICPS------------------------EGF------ISNAGS-LKGVQHVILLSQGAVV 196 (198)
Q Consensus 163 GvDaVIh~a------------------------~G~------lldAA~-~~GVkRiV~vSS~~Vy 196 (198)
.+|.+|+.+ .|. ++..+. +.+-.+||.+||....
T Consensus 86 ~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~ 150 (255)
T 4g81_D 86 HVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQ 150 (255)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhc
Confidence 679999872 011 233343 3466899999997653
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.82 E-value=1.5e-08 Score=89.29 Aligned_cols=93 Identities=18% Similarity=0.153 Sum_probs=72.5
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC---
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS--- 171 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a--- 171 (198)
.+.++|+|+|.|| |++|+.+++.| .+.++|.+..|+.++.... ...+..+..|+.|++++.++++++|.||++.
T Consensus 12 ~~g~~mkilvlGa-G~vG~~~~~~L-~~~~~v~~~~~~~~~~~~~-~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~ 88 (365)
T 3abi_A 12 IEGRHMKVLILGA-GNIGRAIAWDL-KDEFDVYIGDVNNENLEKV-KEFATPLKVDASNFDKLVEVMKEFELVIGALPGF 88 (365)
T ss_dssp ----CCEEEEECC-SHHHHHHHHHH-TTTSEEEEEESCHHHHHHH-TTTSEEEECCTTCHHHHHHHHTTCSEEEECCCGG
T ss_pred ccCCccEEEEECC-CHHHHHHHHHH-hcCCCeEEEEcCHHHHHHH-hccCCcEEEecCCHHHHHHHHhCCCEEEEecCCc
Confidence 3556678999999 99999999877 4679999999987665433 3557889999999999999999999999983
Q ss_pred hh-HHHHHHHhCCCCeEEEEc
Q 029118 172 EG-FISNAGSLKGVQHVILLS 191 (198)
Q Consensus 172 ~G-~lldAA~~~GVkRiV~vS 191 (198)
.+ .++++|.++|+ |+|=+|
T Consensus 89 ~~~~v~~~~~~~g~-~yvD~s 108 (365)
T 3abi_A 89 LGFKSIKAAIKSKV-DMVDVS 108 (365)
T ss_dssp GHHHHHHHHHHHTC-EEEECC
T ss_pred ccchHHHHHHhcCc-ceEeee
Confidence 22 28889988885 666554
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=98.81 E-value=8.5e-09 Score=89.32 Aligned_cols=75 Identities=13% Similarity=0.143 Sum_probs=64.5
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc---cccCCceEEEEccCCCHHHHHHhhc-------Ccc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALR-------GVR 165 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~---~~~g~~vevV~GDl~D~~sL~~AL~-------GvD 165 (198)
...++.+|||||++.||+.++++|.++|++|.+..|+.+... +.++..+..+++|++|+++++++++ .+|
T Consensus 26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD 105 (273)
T 4fgs_A 26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRID 105 (273)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEE
T ss_pred hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 467889999999999999999999999999999999876543 3346778899999999999988763 679
Q ss_pred EEEEc
Q 029118 166 SIICP 170 (198)
Q Consensus 166 aVIh~ 170 (198)
.+|+.
T Consensus 106 iLVNN 110 (273)
T 4fgs_A 106 VLFVN 110 (273)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99986
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=98.81 E-value=1.8e-08 Score=82.02 Aligned_cols=91 Identities=19% Similarity=0.226 Sum_probs=72.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccccc-CCceEEEEccCCCHHHHHHh-hcCccEEEEcC--h-hH
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTA-LRGVRSIICPS--E-GF 174 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~-g~~vevV~GDl~D~~sL~~A-L~GvDaVIh~a--~-G~ 174 (198)
|+|+|+|+ |.+|+++++.|.++|++|+++.++++...... ..+++++.||.+|++.+.++ ++++|+||.+. . .+
T Consensus 1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~n 79 (218)
T 3l4b_C 1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRDEVN 79 (218)
T ss_dssp CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCcHHH
Confidence 57999997 99999999999999999999999987654321 13578999999999999987 89999999872 1 12
Q ss_pred --HHHHHHh-CCCCeEEEEc
Q 029118 175 --ISNAGSL-KGVQHVILLS 191 (198)
Q Consensus 175 --lldAA~~-~GVkRiV~vS 191 (198)
+...+++ .+..++|-..
T Consensus 80 ~~~~~~a~~~~~~~~iia~~ 99 (218)
T 3l4b_C 80 LFIAQLVMKDFGVKRVVSLV 99 (218)
T ss_dssp HHHHHHHHHTSCCCEEEECC
T ss_pred HHHHHHHHHHcCCCeEEEEE
Confidence 4555655 6888887643
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=98.78 E-value=2.2e-08 Score=85.91 Aligned_cols=101 Identities=13% Similarity=0.189 Sum_probs=78.0
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc----ccccCCceEEEEccCCCHHHHHHhhc--CccEEEE
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA----MESFGTYVESMAGDASNKKFLKTALR--GVRSIIC 169 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a----~~~~g~~vevV~GDl~D~~sL~~AL~--GvDaVIh 169 (198)
+..++++|||||++.||+.+++.|.++|++|.+..|+.... ....+..+..+++|++|++.++++++ ++|.+|+
T Consensus 6 ~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVN 85 (247)
T 4hp8_A 6 SLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILVN 85 (247)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEEE
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEEE
Confidence 46789999999999999999999999999999999986421 12346678999999999999888774 5799998
Q ss_pred cC------------------------hhH------HHHHHHhCC-CCeEEEEccccee
Q 029118 170 PS------------------------EGF------ISNAGSLKG-VQHVILLSQGAVV 196 (198)
Q Consensus 170 ~a------------------------~G~------lldAA~~~G-VkRiV~vSS~~Vy 196 (198)
.+ .|. ++..+.++| -.+||.+||....
T Consensus 86 NAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~ 143 (247)
T 4hp8_A 86 NAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSF 143 (247)
T ss_dssp CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT
T ss_pred CCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhC
Confidence 72 011 233344444 5799999997643
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=98.76 E-value=1.4e-08 Score=83.35 Aligned_cols=90 Identities=13% Similarity=0.042 Sum_probs=71.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHh-hcCccEEEEcC--h-h
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPS--E-G 173 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~A-L~GvDaVIh~a--~-G 173 (198)
..+.|+|.|+ |.+|+++++.|.++|+ |+++.|+++...... .+++++.||.+|++.|+++ ++++|+||.+. . .
T Consensus 8 ~~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~ 84 (234)
T 2aef_A 8 KSRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR-SGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSE 84 (234)
T ss_dssp --CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-TTCEEEESCTTCHHHHHHTTCTTCSEEEECCSCHHH
T ss_pred CCCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCCcHH
Confidence 4568999998 9999999999999999 999999887654443 5689999999999999988 89999999872 1 1
Q ss_pred H--HHHHHHhCCCC-eEEEE
Q 029118 174 F--ISNAGSLKGVQ-HVILL 190 (198)
Q Consensus 174 ~--lldAA~~~GVk-RiV~v 190 (198)
+ +...|++.+.+ ++|-.
T Consensus 85 n~~~~~~a~~~~~~~~iia~ 104 (234)
T 2aef_A 85 TIHCILGIRKIDESVRIIAE 104 (234)
T ss_dssp HHHHHHHHHHHCSSSEEEEE
T ss_pred HHHHHHHHHHHCCCCeEEEE
Confidence 2 55667777776 66543
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=98.76 E-value=1.7e-08 Score=88.62 Aligned_cols=94 Identities=15% Similarity=0.120 Sum_probs=68.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCC--CcEEEEEeCCccc--ccccC--CceEEEEccCCCHHHHHHhhcCccEEEEcC
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNA--MESFG--TYVESMAGDASNKKFLKTALRGVRSIICPS 171 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G--~~VralvR~~~~a--~~~~g--~~vevV~GDl~D~~sL~~AL~GvDaVIh~a 171 (198)
.+++|+||||+|++|.+++..|+.+| ++|+++.++++.. ..... .... +.+ +.+...+.+|++|+|.|||++
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~-v~~-~~~t~d~~~al~gaDvVi~~a 84 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAV-VRG-FLGQQQLEAALTGMDLIIVPA 84 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCSSCE-EEE-EESHHHHHHHHTTCSEEEECC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcccccce-EEE-EeCCCCHHHHcCCCCEEEEcC
Confidence 45689999999999999999999998 8999988776521 11111 1112 222 334567889999999999982
Q ss_pred -----h-------------hH--HHHHHHhCCCCeEEEEccc
Q 029118 172 -----E-------------GF--ISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 172 -----~-------------G~--lldAA~~~GVkRiV~vSS~ 193 (198)
. ++ +++++.+.+++.+|+++|-
T Consensus 85 g~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SN 126 (326)
T 1smk_A 85 GVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISN 126 (326)
T ss_dssp CCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred CcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC
Confidence 1 11 6788888899999999874
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=98.75 E-value=9e-09 Score=87.75 Aligned_cols=75 Identities=12% Similarity=0.127 Sum_probs=63.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc---cC--CceEEEEccCCCHHHHHHhhcCccEEEEcC
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG--TYVESMAGDASNKKFLKTALRGVRSIICPS 171 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~---~g--~~vevV~GDl~D~~sL~~AL~GvDaVIh~a 171 (198)
..++++|||||+|.+|+++++.|+++|++|+++.|+++++.+. +. .+++++.+|++|++++.++++.+|.|||++
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlVn~a 196 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTAG 196 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEECC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEEECC
Confidence 4567999999999999999999999999999999987654321 11 136788899999999999999999999983
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=98.70 E-value=6.1e-08 Score=88.79 Aligned_cols=71 Identities=10% Similarity=0.076 Sum_probs=61.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccC--CceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g--~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+++|+||| +|++|+++++.|+++|++|++..|+++++..... ..++.+.+|+.|.+++.++++++|+|||+
T Consensus 3 ~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~ 75 (450)
T 1ff9_A 3 TKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISL 75 (450)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEEC
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEEC
Confidence 46899998 7999999999999999999999998766543321 24788999999999999999999999998
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=98.68 E-value=1.4e-07 Score=72.20 Aligned_cols=71 Identities=15% Similarity=0.223 Sum_probs=61.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHh-hcCccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~A-L~GvDaVIh~ 170 (198)
+++|+|.|+ |.+|+.+++.|.+.|++|+++.++++........++.++.||.+|++.+.++ ++++|+||.+
T Consensus 7 ~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 78 (140)
T 3fwz_A 7 CNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILT 78 (140)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEEC
T ss_pred CCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEE
Confidence 557999997 9999999999999999999999998776544335688999999999999886 6889999987
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=98.64 E-value=6.4e-08 Score=84.35 Aligned_cols=89 Identities=9% Similarity=-0.004 Sum_probs=61.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC--cEEEEEe--CCcccc----------cccCCceEEEEccCCCHHHHHHhhcCcc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRT--RIKALVK--DKRNAM----------ESFGTYVESMAGDASNKKFLKTALRGVR 165 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~--~VralvR--~~~~a~----------~~~g~~vevV~GDl~D~~sL~~AL~GvD 165 (198)
++|+||||+||+|++++..|+.+++ +++++.+ +++++. ...+..+++..++ +++.++++|+|
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~~al~gaD 76 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DENLRIIDESD 76 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCGGGGTTCS
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchHHHhCCCC
Confidence 4799999999999999999998885 4666665 432221 0111223333322 24678999999
Q ss_pred EEEEcC-----h-------------hH--HHHHHHhCCCCeEEEEccc
Q 029118 166 SIICPS-----E-------------GF--ISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 166 aVIh~a-----~-------------G~--lldAA~~~GVkRiV~vSS~ 193 (198)
.|||++ . ++ +++++++.+ +++|+++|-
T Consensus 77 ~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SN 123 (313)
T 1hye_A 77 VVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITN 123 (313)
T ss_dssp EEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSS
T ss_pred EEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecC
Confidence 999982 1 11 788888889 999999884
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=98.63 E-value=2.6e-08 Score=94.07 Aligned_cols=100 Identities=11% Similarity=0.042 Sum_probs=67.2
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEe---------CCcccccc---c-CCceEEEEccCCCHHHHHHhh
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK---------DKRNAMES---F-GTYVESMAGDASNKKFLKTAL 161 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR---------~~~~a~~~---~-g~~vevV~GDl~D~~sL~~AL 161 (198)
.+..++++|||||+|.||++++++|+++|++|.++.| +.+..... . ..+. .+.+|++|.+++.+++
T Consensus 15 ~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~D~~d~~~~~~~~ 93 (613)
T 3oml_A 15 LRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGG-EAVADYNSVIDGAKVI 93 (613)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTC-CEEECCCCGGGHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCC-eEEEEeCCHHHHHHHH
Confidence 3567889999999999999999999999999999987 33322111 1 0111 2357999998888877
Q ss_pred c-------CccEEEEcC-------------h-----------hH--HH----HHHHhCCCCeEEEEcccce
Q 029118 162 R-------GVRSIICPS-------------E-----------GF--IS----NAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 162 ~-------GvDaVIh~a-------------~-----------G~--ll----dAA~~~GVkRiV~vSS~~V 195 (198)
+ .+|.+||++ + |. +. ..+++.+..|||++||.+.
T Consensus 94 ~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~ 164 (613)
T 3oml_A 94 ETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSG 164 (613)
T ss_dssp C----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHH
T ss_pred HHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHH
Confidence 5 579999872 0 11 23 3346778889999999643
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=98.63 E-value=9.7e-09 Score=90.11 Aligned_cols=93 Identities=13% Similarity=0.075 Sum_probs=66.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC-------cEEEEEeC----Ccccc----cccCCceEEEEccCCCHHHHHHhhcC
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRT-------RIKALVKD----KRNAM----ESFGTYVESMAGDASNKKFLKTALRG 163 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~-------~VralvR~----~~~a~----~~~g~~vevV~GDl~D~~sL~~AL~G 163 (198)
.++|+||||+||||++++..|+.+|+ +|+++.++ .+++. ........+ .+|+.....+.+|++|
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~-~~~i~~~~~~~~al~~ 83 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPL-LAGMTAHADPMTAFKD 83 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTT-EEEEEEESSHHHHTTT
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccc-cCcEEEecCcHHHhCC
Confidence 46899999999999999999998886 78888777 32221 111110111 2466666678899999
Q ss_pred ccEEEEcC-----hh-------------H--HHHHHHhCC-CC-eEEEEcc
Q 029118 164 VRSIICPS-----EG-------------F--ISNAGSLKG-VQ-HVILLSQ 192 (198)
Q Consensus 164 vDaVIh~a-----~G-------------~--lldAA~~~G-Vk-RiV~vSS 192 (198)
+|.|||++ .| + +++++.+.+ .+ +||++|.
T Consensus 84 aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SN 134 (329)
T 1b8p_A 84 ADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGN 134 (329)
T ss_dssp CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccC
Confidence 99999982 11 1 677787774 77 8898886
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=98.62 E-value=1.4e-07 Score=79.05 Aligned_cols=75 Identities=7% Similarity=-0.002 Sum_probs=62.2
Q ss_pred cCCCCeEEEEcCCC--hHHHHHHHHHHHCCCcEEEEEeCCcccc-------cccCCceEEEEccCCCHHHHHHhhc----
Q 029118 96 EEARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKRNAM-------ESFGTYVESMAGDASNKKFLKTALR---- 162 (198)
Q Consensus 96 ~~~~~~ILVTGATG--fIG~~Vvr~Ll~~G~~VralvR~~~~a~-------~~~g~~vevV~GDl~D~~sL~~AL~---- 162 (198)
+..++++|||||+| -||+.++++|.++|++|.+..|+.+... +.-+..+.++++|++|++++.++++
T Consensus 3 ~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (256)
T 4fs3_A 3 NLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGK 82 (256)
T ss_dssp CCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 46788999999987 7999999999999999999999875432 1123468999999999999887763
Q ss_pred ---CccEEEEc
Q 029118 163 ---GVRSIICP 170 (198)
Q Consensus 163 ---GvDaVIh~ 170 (198)
.+|.+|+.
T Consensus 83 ~~G~iD~lvnn 93 (256)
T 4fs3_A 83 DVGNIDGVYHS 93 (256)
T ss_dssp HHCCCSEEEEC
T ss_pred HhCCCCEEEec
Confidence 78999986
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=98.61 E-value=5.3e-08 Score=87.64 Aligned_cols=89 Identities=16% Similarity=0.131 Sum_probs=72.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC---cEEEEEeCCcccccc---cC----CceEEEEccCCCHHHHHHhhcC--ccE
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRT---RIKALVKDKRNAMES---FG----TYVESMAGDASNKKFLKTALRG--VRS 166 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~---~VralvR~~~~a~~~---~g----~~vevV~GDl~D~~sL~~AL~G--vDa 166 (198)
+++|+|+|| |+||+.+++.|.++|. +|.+..|+++++... ++ ..++.+..|++|++++.+++++ +|.
T Consensus 1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~Dv 79 (405)
T 4ina_A 1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQI 79 (405)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCE
Confidence 368999999 9999999999999883 899999988765322 11 3588999999999999999988 899
Q ss_pred EEEcC----hhHHHHHHHhCCCCeEE
Q 029118 167 IICPS----EGFISNAGSLKGVQHVI 188 (198)
Q Consensus 167 VIh~a----~G~lldAA~~~GVkRiV 188 (198)
||+++ ...++++|.++|+.-+.
T Consensus 80 Vin~ag~~~~~~v~~a~l~~g~~vvD 105 (405)
T 4ina_A 80 VLNIALPYQDLTIMEACLRTGVPYLD 105 (405)
T ss_dssp EEECSCGGGHHHHHHHHHHHTCCEEE
T ss_pred EEECCCcccChHHHHHHHHhCCCEEE
Confidence 99983 22388899999987543
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.55 E-value=8.6e-08 Score=88.55 Aligned_cols=74 Identities=16% Similarity=0.147 Sum_probs=60.9
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHC-CCcEEEEEeCCcccccccC-CceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~-G~~VralvR~~~~a~~~~g-~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+..+++|+|+|| |++|+.+++.|++. +++|++..|+++++..... .+++.+..|+.|.+++.++++++|+||++
T Consensus 20 ~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~ 95 (467)
T 2axq_A 20 RHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISL 95 (467)
T ss_dssp ---CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEEC
T ss_pred CCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEEC
Confidence 445678999998 99999999999998 7899999998876543211 24778899999999999999999999998
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=98.46 E-value=7.1e-07 Score=75.29 Aligned_cols=36 Identities=14% Similarity=-0.026 Sum_probs=32.7
Q ss_pred CCCCeEEEEcCC--ChHHHHHHHHHHHCCCcEEEEEeC
Q 029118 97 EARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKD 132 (198)
Q Consensus 97 ~~~~~ILVTGAT--GfIG~~Vvr~Ll~~G~~VralvR~ 132 (198)
..++++|||||+ |+||++++++|+++|++|.++.|+
T Consensus 6 l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~ 43 (297)
T 1d7o_A 6 LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWV 43 (297)
T ss_dssp CTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEH
T ss_pred cCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeecc
Confidence 356789999999 999999999999999999999864
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=98.46 E-value=3.9e-07 Score=82.76 Aligned_cols=86 Identities=14% Similarity=0.087 Sum_probs=70.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHh-hcCccEEEEcC---hhH
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPS---EGF 174 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~A-L~GvDaVIh~a---~G~ 174 (198)
++.|+|.|. |.+|+.|++.|.++|++|+++.++++........++.++.||.+|++.|++| ++.+|+||.+. ..+
T Consensus 4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~~~~n 82 (413)
T 3l9w_A 4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTN 82 (413)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCSSHHHH
T ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCCChHHH
Confidence 467999997 9999999999999999999999998876544334588999999999999998 89999999872 111
Q ss_pred --HHHHHHhCCCC
Q 029118 175 --ISNAGSLKGVQ 185 (198)
Q Consensus 175 --lldAA~~~GVk 185 (198)
++..+++.+.+
T Consensus 83 ~~i~~~ar~~~p~ 95 (413)
T 3l9w_A 83 LQLTEMVKEHFPH 95 (413)
T ss_dssp HHHHHHHHHHCTT
T ss_pred HHHHHHHHHhCCC
Confidence 55666666654
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=98.45 E-value=1.3e-07 Score=82.14 Aligned_cols=87 Identities=9% Similarity=0.174 Sum_probs=61.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC--cEEEEEe--CCccccc----c-----cCCceEEEEccCCCHHHHHHhhcCccE
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRT--RIKALVK--DKRNAME----S-----FGTYVESMAGDASNKKFLKTALRGVRS 166 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~--~VralvR--~~~~a~~----~-----~g~~vevV~GDl~D~~sL~~AL~GvDa 166 (198)
++|+||||+|++|++++..|+.+++ +++.+.+ +++++.. . +...+++..+ + .++++|+|.
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~~---~----~~a~~~aDv 73 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQG---G----YEDTAGSDV 73 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEEC---C----GGGGTTCSE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEeC---C----HHHhCCCCE
Confidence 5799999999999999999998886 5666666 4332210 0 1123343332 2 567999999
Q ss_pred EEEcC-----hh-------------H--HHHHHHhCCCCeEEEEccc
Q 029118 167 IICPS-----EG-------------F--ISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 167 VIh~a-----~G-------------~--lldAA~~~GVkRiV~vSS~ 193 (198)
|||++ .| + +++++++.+.+.+|+++|-
T Consensus 74 Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SN 120 (303)
T 1o6z_A 74 VVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSN 120 (303)
T ss_dssp EEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCS
T ss_pred EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence 99982 11 1 6788889999999999874
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=98.45 E-value=7.3e-07 Score=86.90 Aligned_cols=73 Identities=23% Similarity=0.371 Sum_probs=59.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHH-HCCCc-EEEEEeCCcc---cc------cccCCceEEEEccCCCHHHHHHhhcC---
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLI-VKRTR-IKALVKDKRN---AM------ESFGTYVESMAGDASNKKFLKTALRG--- 163 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll-~~G~~-VralvR~~~~---a~------~~~g~~vevV~GDl~D~~sL~~AL~G--- 163 (198)
+.+++|||||+|.||+.+++.|. ++|++ |.++.|+... +. ...+..+.++.+|++|+++++++++.
T Consensus 529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~ 608 (795)
T 3slk_A 529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPD 608 (795)
T ss_dssp TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence 56789999999999999999998 79985 8888887322 11 12356789999999999999999864
Q ss_pred ---ccEEEEc
Q 029118 164 ---VRSIICP 170 (198)
Q Consensus 164 ---vDaVIh~ 170 (198)
+|.|||+
T Consensus 609 ~~~id~lVnn 618 (795)
T 3slk_A 609 EHPLTAVVHA 618 (795)
T ss_dssp TSCEEEEEEC
T ss_pred hCCCEEEEEC
Confidence 5899997
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=98.44 E-value=2.8e-07 Score=78.84 Aligned_cols=36 Identities=11% Similarity=0.020 Sum_probs=32.7
Q ss_pred CCCCeEEEEcC--CChHHHHHHHHHHHCCCcEEEEEeC
Q 029118 97 EARDAVLVTDG--DSDIGQMVILSLIVKRTRIKALVKD 132 (198)
Q Consensus 97 ~~~~~ILVTGA--TGfIG~~Vvr~Ll~~G~~VralvR~ 132 (198)
..++++||||| +|+||++++++|+++|++|.++.|+
T Consensus 7 l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~ 44 (315)
T 2o2s_A 7 LRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWP 44 (315)
T ss_dssp CTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECH
T ss_pred CCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecc
Confidence 45678999999 8999999999999999999999875
|
| >1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A | Back alignment and structure |
|---|
Probab=98.42 E-value=3.5e-07 Score=79.07 Aligned_cols=88 Identities=14% Similarity=0.091 Sum_probs=70.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHh-hcCccEEEEc-C-h-hH
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICP-S-E-GF 174 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~A-L~GvDaVIh~-a-~-G~ 174 (198)
.+.|+|.|+ |.+|++++++|.++|+ |+++.++++... ....++.++.||.+|++.|++| ++++|+||.+ . . .+
T Consensus 115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~~d~~n 191 (336)
T 1lnq_A 115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSET 191 (336)
T ss_dssp -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECCSSHHHH
T ss_pred cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcCCccHHH
Confidence 457999997 9999999999999999 999999887765 4345689999999999999998 8999999987 2 2 22
Q ss_pred --HHHHHHhCCCC-eEEE
Q 029118 175 --ISNAGSLKGVQ-HVIL 189 (198)
Q Consensus 175 --lldAA~~~GVk-RiV~ 189 (198)
+...+++.+.+ ++|-
T Consensus 192 ~~~~~~ar~~~~~~~iia 209 (336)
T 1lnq_A 192 IHCILGIRKIDESVRIIA 209 (336)
T ss_dssp HHHHHHHHTTCTTSEEEE
T ss_pred HHHHHHHHHHCCCCeEEE
Confidence 45566777665 5543
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=98.40 E-value=4.8e-07 Score=77.37 Aligned_cols=36 Identities=11% Similarity=-0.002 Sum_probs=32.5
Q ss_pred CCCCeEEEEcC--CChHHHHHHHHHHHCCCcEEEEEeC
Q 029118 97 EARDAVLVTDG--DSDIGQMVILSLIVKRTRIKALVKD 132 (198)
Q Consensus 97 ~~~~~ILVTGA--TGfIG~~Vvr~Ll~~G~~VralvR~ 132 (198)
..++++||||| +++||++++++|+++|++|.++.|+
T Consensus 7 l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~ 44 (319)
T 2ptg_A 7 LRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWP 44 (319)
T ss_dssp CTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEecc
Confidence 34678999999 8999999999999999999999864
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=98.34 E-value=3.9e-07 Score=72.37 Aligned_cols=94 Identities=17% Similarity=0.135 Sum_probs=62.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHH---HHhh--cCccEEEEcCh
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFL---KTAL--RGVRSIICPSE 172 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL---~~AL--~GvDaVIh~a~ 172 (198)
++++||||||+|.||..+++.+...|++|.+++|++++.......+.+. ..|..+.+.. .+.. .++|.||++..
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g 116 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEY-VGDSRSVDFADEILELTDGYGVDVVLNSLA 116 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSE-EEETTCSTHHHHHHHHTTTCCEEEEEECCC
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCE-EeeCCcHHHHHHHHHHhCCCCCeEEEECCc
Confidence 4678999999999999999999999999999999876542221112222 2366665433 3333 36999998842
Q ss_pred hH----HHHHHHhCCCCeEEEEcccc
Q 029118 173 GF----ISNAGSLKGVQHVILLSQGA 194 (198)
Q Consensus 173 G~----lldAA~~~GVkRiV~vSS~~ 194 (198)
+. .+++++..| |+|.+++..
T Consensus 117 ~~~~~~~~~~l~~~G--~~v~~g~~~ 140 (198)
T 1pqw_A 117 GEAIQRGVQILAPGG--RFIELGKKD 140 (198)
T ss_dssp THHHHHHHHTEEEEE--EEEECSCGG
T ss_pred hHHHHHHHHHhccCC--EEEEEcCCC
Confidence 22 344444444 888887644
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=98.30 E-value=2.4e-06 Score=90.44 Aligned_cols=74 Identities=15% Similarity=0.188 Sum_probs=60.3
Q ss_pred CCCCeEEEEcCCCh-HHHHHHHHHHHCCCcEEEE-EeCCccccc-------c---cCCceEEEEccCCCHHHHHHhhc--
Q 029118 97 EARDAVLVTDGDSD-IGQMVILSLIVKRTRIKAL-VKDKRNAME-------S---FGTYVESMAGDASNKKFLKTALR-- 162 (198)
Q Consensus 97 ~~~~~ILVTGATGf-IG~~Vvr~Ll~~G~~Vral-vR~~~~a~~-------~---~g~~vevV~GDl~D~~sL~~AL~-- 162 (198)
..++++|||||++. ||++++++|+++|++|.++ .|+.+.... . .+..+.++.+|++|++++.++++
T Consensus 673 l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i 752 (1887)
T 2uv8_A 673 FKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFI 752 (1887)
T ss_dssp CTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHH
Confidence 45678999999998 9999999999999999998 466543311 1 14568899999999999988763
Q ss_pred -----------CccEEEEc
Q 029118 163 -----------GVRSIICP 170 (198)
Q Consensus 163 -----------GvDaVIh~ 170 (198)
.+|.|||+
T Consensus 753 ~~~~~~~G~G~~LDiLVNN 771 (1887)
T 2uv8_A 753 YDTEKNGGLGWDLDAIIPF 771 (1887)
T ss_dssp HSCTTTTSCCCCCSEEEEC
T ss_pred HHhccccccCCCCeEEEEC
Confidence 48999997
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=98.25 E-value=2.5e-06 Score=73.58 Aligned_cols=72 Identities=11% Similarity=0.088 Sum_probs=52.8
Q ss_pred CCeEEEEcCCC--hHHHHHHHHHHHCCCcEEEEEeCC---------cc---cc---cccC---CceEEEEccCCCH--H-
Q 029118 99 RDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDK---------RN---AM---ESFG---TYVESMAGDASNK--K- 155 (198)
Q Consensus 99 ~~~ILVTGATG--fIG~~Vvr~Ll~~G~~VralvR~~---------~~---a~---~~~g---~~vevV~GDl~D~--~- 155 (198)
++++|||||++ .||++++++|+++|++|.+..|++ ++ .. ...+ ..+.++..|+++. +
T Consensus 2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~ 81 (329)
T 3lt0_A 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND 81 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGG
T ss_pred CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhh
Confidence 57899999975 999999999999999999777554 11 11 1111 2367889999877 6
Q ss_pred -----------------HHHHhh-------cCccEEEEc
Q 029118 156 -----------------FLKTAL-------RGVRSIICP 170 (198)
Q Consensus 156 -----------------sL~~AL-------~GvDaVIh~ 170 (198)
++.+++ ..+|.+||.
T Consensus 82 ~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnn 120 (329)
T 3lt0_A 82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHS 120 (329)
T ss_dssp CCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEEC
T ss_pred hhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEEC
Confidence 555554 368999987
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=98.16 E-value=7.1e-06 Score=88.60 Aligned_cols=73 Identities=12% Similarity=0.108 Sum_probs=59.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCc-EEEEEeCCcccc---------cccCCceEEEEccCCCHHHHHHhhc-----
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNAM---------ESFGTYVESMAGDASNKKFLKTALR----- 162 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~-VralvR~~~~a~---------~~~g~~vevV~GDl~D~~sL~~AL~----- 162 (198)
+.+++|||||+|.||+.+++.|.++|++ |.++.|+..+.. ...+..+.++.+|++|+++++++++
T Consensus 1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 1962 (2512)
T 2vz8_A 1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQL 1962 (2512)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhc
Confidence 5678999999999999999999999998 666778754321 1125568889999999999988764
Q ss_pred -CccEEEEc
Q 029118 163 -GVRSIICP 170 (198)
Q Consensus 163 -GvDaVIh~ 170 (198)
.+|.|||.
T Consensus 1963 g~id~lVnn 1971 (2512)
T 2vz8_A 1963 GPVGGVFNL 1971 (2512)
T ss_dssp SCEEEEEEC
T ss_pred CCCcEEEEC
Confidence 57999997
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=98.10 E-value=6.7e-06 Score=77.76 Aligned_cols=99 Identities=9% Similarity=0.042 Sum_probs=68.8
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCC-ccccc---ccCCceEEEEccC-CCHHHHHH-h---hcCccE
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAME---SFGTYVESMAGDA-SNKKFLKT-A---LRGVRS 166 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~-~~a~~---~~g~~vevV~GDl-~D~~sL~~-A---L~GvDa 166 (198)
...++.++||||++.||+.++++|.++|++|.+..|+. +.... ..+..+..+..|+ .+.+.+.+ + +..+|.
T Consensus 319 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iDi 398 (604)
T 2et6_A 319 SLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTIDI 398 (604)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCCCE
T ss_pred ccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCCCE
Confidence 35578899999999999999999999999999887633 22111 1244566777888 66554332 2 357899
Q ss_pred EEEcC------------------------hhH------HHHHHHhCCCCeEEEEcccc
Q 029118 167 IICPS------------------------EGF------ISNAGSLKGVQHVILLSQGA 194 (198)
Q Consensus 167 VIh~a------------------------~G~------lldAA~~~GVkRiV~vSS~~ 194 (198)
+|+.+ .|. ++..+++++-.|||++||.+
T Consensus 399 LVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~a 456 (604)
T 2et6_A 399 LVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTS 456 (604)
T ss_dssp EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChh
Confidence 99872 011 34445566668999999964
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=98.09 E-value=1e-05 Score=69.03 Aligned_cols=70 Identities=14% Similarity=0.206 Sum_probs=52.4
Q ss_pred CCCeEEEEcC----------------CChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHH---
Q 029118 98 ARDAVLVTDG----------------DSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLK--- 158 (198)
Q Consensus 98 ~~~~ILVTGA----------------TGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~--- 158 (198)
.+++|||||| ||.+|.+++++|+.+|++|.++.|+.... ...+.+++++ |+.....+.
T Consensus 2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~-~~~~~~~~~~--~v~s~~em~~~v 78 (232)
T 2gk4_A 2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALK-PEPHPNLSIR--EITNTKDLLIEM 78 (232)
T ss_dssp -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCC-CCCCTTEEEE--ECCSHHHHHHHH
T ss_pred CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccc-ccCCCCeEEE--EHhHHHHHHHHH
Confidence 4679999999 99999999999999999999999976422 1113456655 455554444
Q ss_pred -HhhcCccEEEEc
Q 029118 159 -TALRGVRSIICP 170 (198)
Q Consensus 159 -~AL~GvDaVIh~ 170 (198)
+.+.++|.+|++
T Consensus 79 ~~~~~~~Dili~a 91 (232)
T 2gk4_A 79 QERVQDYQVLIHS 91 (232)
T ss_dssp HHHGGGCSEEEEC
T ss_pred HHhcCCCCEEEEc
Confidence 445689999998
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=98.07 E-value=1.1e-05 Score=74.17 Aligned_cols=72 Identities=18% Similarity=0.214 Sum_probs=59.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHH-CCCcEEEEEeCCcccc------------------cccCCceEEEEccCCCHHHHHH
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIV-KRTRIKALVKDKRNAM------------------ESFGTYVESMAGDASNKKFLKT 159 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~-~G~~VralvR~~~~a~------------------~~~g~~vevV~GDl~D~~sL~~ 159 (198)
++++|||||++.||+.+++.|.+ +|++|.++.|+.+... ...+..+..+.+|++|++++++
T Consensus 61 gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~~ 140 (422)
T 3s8m_A 61 PKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARAQ 140 (422)
T ss_dssp CSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHH
T ss_pred CCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHHH
Confidence 57899999999999999999999 9999999998764321 1235568889999999998877
Q ss_pred hh--------cCccEEEEc
Q 029118 160 AL--------RGVRSIICP 170 (198)
Q Consensus 160 AL--------~GvDaVIh~ 170 (198)
++ -.+|.+|+.
T Consensus 141 ~v~~i~~~~~G~IDiLVNN 159 (422)
T 3s8m_A 141 VIELIKTEMGGQVDLVVYS 159 (422)
T ss_dssp HHHHHHHHSCSCEEEEEEC
T ss_pred HHHHHHHHcCCCCCEEEEc
Confidence 65 357999985
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=98.06 E-value=1.1e-05 Score=73.74 Aligned_cols=73 Identities=10% Similarity=0.144 Sum_probs=59.3
Q ss_pred CCCeEEEEcCCChHHHH--HHHHHHHCCCcEEEEEeCCcccc------------------cccCCceEEEEccCCCHHHH
Q 029118 98 ARDAVLVTDGDSDIGQM--VILSLIVKRTRIKALVKDKRNAM------------------ESFGTYVESMAGDASNKKFL 157 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~--Vvr~Ll~~G~~VralvR~~~~a~------------------~~~g~~vevV~GDl~D~~sL 157 (198)
.++++|||||++.||+. ++++|.++|++|.++.|+..... ...+..+..+.+|++|++++
T Consensus 59 ~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~v 138 (418)
T 4eue_A 59 GPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNETK 138 (418)
T ss_dssp CCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHHH
Confidence 45789999999999999 99999888999999998754311 12345688999999999988
Q ss_pred HHhhc-------CccEEEEc
Q 029118 158 KTALR-------GVRSIICP 170 (198)
Q Consensus 158 ~~AL~-------GvDaVIh~ 170 (198)
+++++ .+|.+|+.
T Consensus 139 ~~~v~~i~~~~G~IDiLVnN 158 (418)
T 4eue_A 139 DKVIKYIKDEFGKIDLFVYS 158 (418)
T ss_dssp HHHHHHHHHTTCCEEEEEEC
T ss_pred HHHHHHHHHHcCCCCEEEEC
Confidence 87763 57999986
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=98.06 E-value=5e-06 Score=76.30 Aligned_cols=92 Identities=14% Similarity=0.136 Sum_probs=70.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccccc-CCceEEEEccCCCHHHHHHh-hcCccEEEEcC---h
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTA-LRGVRSIICPS---E 172 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~-g~~vevV~GDl~D~~sL~~A-L~GvDaVIh~a---~ 172 (198)
+.|+|+|.|+ |.+|+++++.|..+||+|.++.++++...... ..++.++.||.++++.|++| ++.+|++|.+. +
T Consensus 2 ~~M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t~~De 80 (461)
T 4g65_A 2 NAMKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVTNTDE 80 (461)
T ss_dssp CCEEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEECCSCHH
T ss_pred CcCEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEcCChH
Confidence 4578999987 99999999999999999999999987654322 12488999999999999998 68899999772 2
Q ss_pred hH--HHHHHHh-CCCCeEEEE
Q 029118 173 GF--ISNAGSL-KGVQHVILL 190 (198)
Q Consensus 173 G~--lldAA~~-~GVkRiV~v 190 (198)
-+ ....|++ .+++++|-.
T Consensus 81 ~Nl~~~~~Ak~~~~~~~~iar 101 (461)
T 4g65_A 81 TNMAACQVAFTLFNTPNRIAR 101 (461)
T ss_dssp HHHHHHHHHHHHHCCSSEEEE
T ss_pred HHHHHHHHHHHhcCCccceeE
Confidence 23 2334554 377776643
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=98.05 E-value=7.6e-06 Score=86.59 Aligned_cols=74 Identities=12% Similarity=0.154 Sum_probs=60.0
Q ss_pred CCCCeEEEEcCCCh-HHHHHHHHHHHCCCcEEEEE-eCCcccc-------cc---cCCceEEEEccCCCHHHHHHhhc--
Q 029118 97 EARDAVLVTDGDSD-IGQMVILSLIVKRTRIKALV-KDKRNAM-------ES---FGTYVESMAGDASNKKFLKTALR-- 162 (198)
Q Consensus 97 ~~~~~ILVTGATGf-IG~~Vvr~Ll~~G~~Vralv-R~~~~a~-------~~---~g~~vevV~GDl~D~~sL~~AL~-- 162 (198)
..++++|||||+|. ||++++++|+++|++|.++. |+.+... .. .+..+.++.+|++|++++.++++
T Consensus 650 L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i 729 (1878)
T 2uv9_A 650 FQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNYI 729 (1878)
T ss_dssp CTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 45678999999999 99999999999999999885 5554321 11 14568899999999999988773
Q ss_pred ---------CccEEEEc
Q 029118 163 ---------GVRSIICP 170 (198)
Q Consensus 163 ---------GvDaVIh~ 170 (198)
.+|.|||+
T Consensus 730 ~~~~~~~G~~IDiLVnN 746 (1878)
T 2uv9_A 730 YDTKNGLGWDLDYVVPF 746 (1878)
T ss_dssp HCSSSSCCCCCSEEEEC
T ss_pred HHhhcccCCCCcEEEeC
Confidence 48999997
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=98.04 E-value=3.7e-07 Score=73.26 Aligned_cols=69 Identities=12% Similarity=0.053 Sum_probs=49.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCC-ceEEEE-ccCCCHHHHHHhhcCccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT-YVESMA-GDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~-~vevV~-GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
++|+|+||+|++|+++++.|+++|++|+++.|++++....... +. .+. +|+. ..++.++++++|.||++
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~D~Vi~~ 71 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRR-IAGDASIT-GMKNEDAAEACDIAVLT 71 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHH-HHSSCCEE-EEEHHHHHHHCSEEEEC
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc-ccccCCCC-hhhHHHHHhcCCEEEEe
Confidence 4799999999999999999999999999999987654321110 00 000 1222 23566788899999998
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=98.02 E-value=1.9e-05 Score=72.49 Aligned_cols=73 Identities=16% Similarity=0.242 Sum_probs=59.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHH-CCCcEEEEEeCCcccc------------------cccCCceEEEEccCCCHHHHH
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIV-KRTRIKALVKDKRNAM------------------ESFGTYVESMAGDASNKKFLK 158 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~-~G~~VralvR~~~~a~------------------~~~g~~vevV~GDl~D~~sL~ 158 (198)
.++++|||||++.||+.+++.|.+ +|++|.++.|+.+... ...+..+..+.+|++|++++.
T Consensus 46 ~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v~ 125 (405)
T 3zu3_A 46 GPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIKQ 125 (405)
T ss_dssp CCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred CCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence 457899999999999999999999 9999999988754321 123556788999999999988
Q ss_pred Hhhc-------CccEEEEc
Q 029118 159 TALR-------GVRSIICP 170 (198)
Q Consensus 159 ~AL~-------GvDaVIh~ 170 (198)
++++ .+|.+|+.
T Consensus 126 ~~v~~i~~~~G~IDiLVNN 144 (405)
T 3zu3_A 126 LTIDAIKQDLGQVDQVIYS 144 (405)
T ss_dssp HHHHHHHHHTSCEEEEEEC
T ss_pred HHHHHHHHHcCCCCEEEEc
Confidence 7763 57999886
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.00 E-value=5.7e-06 Score=86.33 Aligned_cols=74 Identities=16% Similarity=0.217 Sum_probs=59.5
Q ss_pred CCCCeEEEEcCCCh-HHHHHHHHHHHCCCcEEEE-EeCCccccc---cc-------CCceEEEEccCCCHHHHHHhhc--
Q 029118 97 EARDAVLVTDGDSD-IGQMVILSLIVKRTRIKAL-VKDKRNAME---SF-------GTYVESMAGDASNKKFLKTALR-- 162 (198)
Q Consensus 97 ~~~~~ILVTGATGf-IG~~Vvr~Ll~~G~~Vral-vR~~~~a~~---~~-------g~~vevV~GDl~D~~sL~~AL~-- 162 (198)
..++++|||||+|. ||++++++|+++|++|.++ .|+.+.... .. +..+.++.+|++|+++++++++
T Consensus 474 L~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I 553 (1688)
T 2pff_A 474 FKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFI 553 (1688)
T ss_dssp CCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHH
T ss_pred cCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHH
Confidence 45678999999998 9999999999999999998 465543211 11 4468899999999999988763
Q ss_pred -----------CccEEEEc
Q 029118 163 -----------GVRSIICP 170 (198)
Q Consensus 163 -----------GvDaVIh~ 170 (198)
.+|.|||+
T Consensus 554 ~e~~~~~GfG~~IDILVNN 572 (1688)
T 2pff_A 554 YDTEKNGGLGWDLDAIIPF 572 (1688)
T ss_dssp HSCTTSSSCCCCCCEEECC
T ss_pred HHhccccccCCCCeEEEEC
Confidence 48999987
|
| >2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=97.99 E-value=1.2e-05 Score=71.35 Aligned_cols=86 Identities=16% Similarity=0.141 Sum_probs=55.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCc---EEEEEe--CCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC-hh
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTR---IKALVK--DKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-EG 173 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~---VralvR--~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a-~G 173 (198)
++|+|.||||.||+.+++.|.+++|+ ++++.. +..+.....+ .++...|. |+ +++.|+|.||.+. .+
T Consensus 7 ~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~~~~~g--~~i~~~~~-~~----~~~~~~DvV~~a~g~~ 79 (340)
T 2hjs_A 7 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFAE--SSLRVGDV-DS----FDFSSVGLAFFAAAAE 79 (340)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEETT--EEEECEEG-GG----CCGGGCSEEEECSCHH
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCccccCC--cceEEecC-CH----HHhcCCCEEEEcCCcH
Confidence 57999999999999999999987764 566652 2211111111 22222232 22 2367999999983 22
Q ss_pred H---HHHHHHhCCCCeEEEEccc
Q 029118 174 F---ISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 174 ~---lldAA~~~GVkRiV~vSS~ 193 (198)
. +++++.++|++ +|.+|+.
T Consensus 80 ~s~~~a~~~~~aG~k-vId~Sa~ 101 (340)
T 2hjs_A 80 VSRAHAERARAAGCS-VIDLSGA 101 (340)
T ss_dssp HHHHHHHHHHHTTCE-EEETTCT
T ss_pred HHHHHHHHHHHCCCE-EEEeCCC
Confidence 2 67777888986 6777764
|
| >2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A | Back alignment and structure |
|---|
Probab=97.94 E-value=7.5e-06 Score=73.28 Aligned_cols=86 Identities=14% Similarity=0.087 Sum_probs=57.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC------CcEEEEEeCCc--c-cccccC-----CceEEEEccCCCHHHHHHhhcCc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKR------TRIKALVKDKR--N-AMESFG-----TYVESMAGDASNKKFLKTALRGV 164 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G------~~VralvR~~~--~-a~~~~g-----~~vevV~GDl~D~~sL~~AL~Gv 164 (198)
+++|+|.||||.+|+.+++.|++++ .+|+++.+... + .....+ ..+.+ .|+ |+ +++.++
T Consensus 9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~--~~~-~~----~~~~~~ 81 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVV--EPT-EA----AVLGGH 81 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBC--EEC-CH----HHHTTC
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeee--ccC-CH----HHhcCC
Confidence 3579999999999999999999887 37888875432 2 111111 11222 232 33 346799
Q ss_pred cEEEEcC-h---hHHHHHHHhCCCCeEEEEccc
Q 029118 165 RSIICPS-E---GFISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 165 DaVIh~a-~---G~lldAA~~~GVkRiV~vSS~ 193 (198)
|.||++. . ..+++++ ++|+ ++|-+|+.
T Consensus 82 DvVf~alg~~~s~~~~~~~-~~G~-~vIDlSa~ 112 (352)
T 2nqt_A 82 DAVFLALPHGHSAVLAQQL-SPET-LIIDCGAD 112 (352)
T ss_dssp SEEEECCTTSCCHHHHHHS-CTTS-EEEECSST
T ss_pred CEEEECCCCcchHHHHHHH-hCCC-EEEEECCC
Confidence 9999883 2 2277778 8885 78888874
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=97.91 E-value=4.1e-05 Score=72.38 Aligned_cols=97 Identities=14% Similarity=0.028 Sum_probs=62.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCC---------cccc----cccCCceEEEEccCCCHHHHHHh---
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK---------RNAM----ESFGTYVESMAGDASNKKFLKTA--- 160 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~---------~~a~----~~~g~~vevV~GDl~D~~sL~~A--- 160 (198)
..+++++||||++.||+.++++|.++|++|.+..|+. +.+. +....+.+. ..|+.|.+.++++
T Consensus 6 l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~-~~d~~d~~~~~~~v~~ 84 (604)
T 2et6_A 6 FKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVA-VADYNNVLDGDKIVET 84 (604)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEE-EEECCCTTCHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeE-EEEcCCHHHHHHHHHH
Confidence 4567899999999999999999999999999987754 2221 110011122 3466665433322
Q ss_pred ----hcCccEEEEcC------------------------hhH------HHHHHHhCCCCeEEEEcccc
Q 029118 161 ----LRGVRSIICPS------------------------EGF------ISNAGSLKGVQHVILLSQGA 194 (198)
Q Consensus 161 ----L~GvDaVIh~a------------------------~G~------lldAA~~~GVkRiV~vSS~~ 194 (198)
+..+|.+|+.+ .|. ++..+++++-.|||++||..
T Consensus 85 ~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~a 152 (604)
T 2et6_A 85 AVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPA 152 (604)
T ss_dssp HHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHH
T ss_pred HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHH
Confidence 35789999872 011 33445556667999999964
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.88 E-value=1.5e-05 Score=68.92 Aligned_cols=92 Identities=15% Similarity=0.108 Sum_probs=61.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc--ccCCceEEEEccCCCHHHHHHhhc-----CccEEEE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASNKKFLKTALR-----GVRSIIC 169 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~--~~g~~vevV~GDl~D~~sL~~AL~-----GvDaVIh 169 (198)
.++++|||+||+|.||..+++.+...|++|.+++|++++... .++ .+.+ .|+.+.+.+.++++ ++|.||+
T Consensus 168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g--~~~~-~d~~~~~~~~~~~~~~~~~~~D~vi~ 244 (347)
T 2hcy_A 168 MAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIG--GEVF-IDFTKEKDIVGAVLKATDGGAHGVIN 244 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTT--CCEE-EETTTCSCHHHHHHHHHTSCEEEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcC--CceE-EecCccHhHHHHHHHHhCCCCCEEEE
Confidence 356799999999999999999999999999999998765432 233 2322 37664334433332 7999998
Q ss_pred cChh-HHH----HHHHhCCCCeEEEEccc
Q 029118 170 PSEG-FIS----NAGSLKGVQHVILLSQG 193 (198)
Q Consensus 170 ~a~G-~ll----dAA~~~GVkRiV~vSS~ 193 (198)
+..+ ..+ ++++.. .|+|.+++.
T Consensus 245 ~~g~~~~~~~~~~~l~~~--G~iv~~g~~ 271 (347)
T 2hcy_A 245 VSVSEAAIEASTRYVRAN--GTTVLVGMP 271 (347)
T ss_dssp CSSCHHHHHHHTTSEEEE--EEEEECCCC
T ss_pred CCCcHHHHHHHHHHHhcC--CEEEEEeCC
Confidence 8322 222 222333 378887654
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.87 E-value=5.7e-06 Score=70.75 Aligned_cols=91 Identities=10% Similarity=0.093 Sum_probs=61.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc--ccCCceEEEEccCCCHHHH---HHhh--cCccEEEEc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASNKKFL---KTAL--RGVRSIICP 170 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~--~~g~~vevV~GDl~D~~sL---~~AL--~GvDaVIh~ 170 (198)
++++||||||+|.||..+++.+...|++|.+++|++++... .++. +. ..|..+.+.. .+.. .++|.||++
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~--~~-~~~~~~~~~~~~~~~~~~~~~~D~vi~~ 216 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGA--WQ-VINYREEDLVERLKEITGGKKVRVVYDS 216 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTC--SE-EEETTTSCHHHHHHHHTTTCCEEEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCC--CE-EEECCCccHHHHHHHHhCCCCceEEEEC
Confidence 46799999999999999999999999999999998755322 2332 22 2356554433 3333 368999988
Q ss_pred ChhH----HHHHHHhCCCCeEEEEccc
Q 029118 171 SEGF----ISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 171 a~G~----lldAA~~~GVkRiV~vSS~ 193 (198)
..+. .+++++..| |+|.+++.
T Consensus 217 ~g~~~~~~~~~~l~~~G--~iv~~g~~ 241 (327)
T 1qor_A 217 VGRDTWERSLDCLQRRG--LMVSFGNS 241 (327)
T ss_dssp SCGGGHHHHHHTEEEEE--EEEECCCT
T ss_pred CchHHHHHHHHHhcCCC--EEEEEecC
Confidence 4232 334444433 78887653
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=97.86 E-value=7.8e-05 Score=63.30 Aligned_cols=69 Identities=10% Similarity=0.100 Sum_probs=53.7
Q ss_pred CCCCeEEEEcC----------------CChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHh
Q 029118 97 EARDAVLVTDG----------------DSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA 160 (198)
Q Consensus 97 ~~~~~ILVTGA----------------TGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~A 160 (198)
..++++||||| ||.+|..++++|.++|++|.++.|+.. .. .+.+++ ..|+++...+.++
T Consensus 6 l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~--~~~g~~--~~dv~~~~~~~~~ 80 (226)
T 1u7z_A 6 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP--TPPFVK--RVDVMTALEMEAA 80 (226)
T ss_dssp TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC--CCTTEE--EEECCSHHHHHHH
T ss_pred CCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc--cCCCCe--EEccCcHHHHHHH
Confidence 56789999999 799999999999999999999887652 11 122344 4588887766655
Q ss_pred h----cCccEEEEc
Q 029118 161 L----RGVRSIICP 170 (198)
Q Consensus 161 L----~GvDaVIh~ 170 (198)
+ .++|.+|++
T Consensus 81 v~~~~~~~Dili~~ 94 (226)
T 1u7z_A 81 VNASVQQQNIFIGC 94 (226)
T ss_dssp HHHHGGGCSEEEEC
T ss_pred HHHhcCCCCEEEEC
Confidence 4 579999987
|
| >2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C* | Back alignment and structure |
|---|
Probab=97.82 E-value=5.5e-05 Score=66.87 Aligned_cols=87 Identities=13% Similarity=0.121 Sum_probs=56.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC---CcEEEEEe--CCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC-h
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKR---TRIKALVK--DKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-E 172 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G---~~VralvR--~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a-~ 172 (198)
+++|.|.||||.||+.+++.|.+++ .+++++.. +..+.....+..+.+ .+. |+ ..+.++|.||.+. .
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~~~~~~~~i~~--~~~-~~----~~~~~vDvVf~a~g~ 75 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKTYRFNGKTVRV--QNV-EE----FDWSQVHIALFSAGG 75 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCEEEETTEEEEE--EEG-GG----CCGGGCSEEEECSCH
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCceeecCceeEE--ecC-Ch----HHhcCCCEEEECCCc
Confidence 4689999999999999999999874 46777763 221211111222223 222 22 2457999999883 2
Q ss_pred hH---HHHHHHhCCCCeEEEEccc
Q 029118 173 GF---ISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 173 G~---lldAA~~~GVkRiV~vSS~ 193 (198)
+. .+.++.++|+ ++|-+|+.
T Consensus 76 ~~s~~~a~~~~~~G~-~vId~s~~ 98 (336)
T 2r00_A 76 ELSAKWAPIAAEAGV-VVIDNTSH 98 (336)
T ss_dssp HHHHHHHHHHHHTTC-EEEECSST
T ss_pred hHHHHHHHHHHHcCC-EEEEcCCc
Confidence 22 6677778897 57777764
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=97.82 E-value=9.6e-06 Score=69.67 Aligned_cols=92 Identities=12% Similarity=0.140 Sum_probs=61.0
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc--ccCCceEEEEccCCCHH---HHHHhh--cCccEEEE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASNKK---FLKTAL--RGVRSIIC 169 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~--~~g~~vevV~GDl~D~~---sL~~AL--~GvDaVIh 169 (198)
.++++||||||+|.||..+++.+...|++|.+++|++++... .++. +. ..|..+.+ .+.+.. .++|.||.
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~--~~-~~d~~~~~~~~~i~~~~~~~~~d~vi~ 220 (333)
T 1wly_A 144 KPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGC--HH-TINYSTQDFAEVVREITGGKGVDVVYD 220 (333)
T ss_dssp CTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTC--SE-EEETTTSCHHHHHHHHHTTCCEEEEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC--CE-EEECCCHHHHHHHHHHhCCCCCeEEEE
Confidence 356799999999999999999999999999999998754322 2332 22 23555543 333333 37999998
Q ss_pred cChhH----HHHHHHhCCCCeEEEEccc
Q 029118 170 PSEGF----ISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 170 ~a~G~----lldAA~~~GVkRiV~vSS~ 193 (198)
+..+. .+++++..| ++|.++..
T Consensus 221 ~~g~~~~~~~~~~l~~~G--~iv~~g~~ 246 (333)
T 1wly_A 221 SIGKDTLQKSLDCLRPRG--MCAAYGHA 246 (333)
T ss_dssp CSCTTTHHHHHHTEEEEE--EEEECCCT
T ss_pred CCcHHHHHHHHHhhccCC--EEEEEecC
Confidence 83222 334444434 77777643
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.80 E-value=1.5e-05 Score=68.85 Aligned_cols=91 Identities=13% Similarity=0.175 Sum_probs=63.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc--ccCCceEEEEccCCCHH---HHHHhh--cCccEEEEc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASNKK---FLKTAL--RGVRSIICP 170 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~--~~g~~vevV~GDl~D~~---sL~~AL--~GvDaVIh~ 170 (198)
++++|||+||+|.+|..+++.+...|++|.+++|++++... .++ .+.+ .|..+.+ .+.++. .++|.||.+
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g--a~~~-~d~~~~~~~~~~~~~~~~~~~d~vi~~ 242 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALG--ADET-VNYTHPDWPKEVRRLTGGKGADKVVDH 242 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHT--CSEE-EETTSTTHHHHHHHHTTTTCEEEEEES
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcC--CCEE-EcCCcccHHHHHHHHhCCCCceEEEEC
Confidence 56789999999999999999999999999999998765432 233 2222 3665543 344444 378999988
Q ss_pred Chh----HHHHHHHhCCCCeEEEEccc
Q 029118 171 SEG----FISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 171 a~G----~lldAA~~~GVkRiV~vSS~ 193 (198)
..+ ..+++++..| |+|.+++.
T Consensus 243 ~g~~~~~~~~~~l~~~G--~~v~~g~~ 267 (343)
T 2eih_A 243 TGALYFEGVIKATANGG--RIAIAGAS 267 (343)
T ss_dssp SCSSSHHHHHHHEEEEE--EEEESSCC
T ss_pred CCHHHHHHHHHhhccCC--EEEEEecC
Confidence 322 2555555555 88887754
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.80 E-value=1.8e-05 Score=70.15 Aligned_cols=91 Identities=12% Similarity=0.169 Sum_probs=66.0
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc---cccCCceEEEEccCCCHHHHHHhhcCccEEEEcC--
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-- 171 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~---~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a-- 171 (198)
.+.++|+|+|+ |.||+.+++.|...|++|.++.|++++.. ..++.. +..|..+.+.+.++++++|.||++.
T Consensus 164 l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~---~~~~~~~~~~l~~~~~~~DvVi~~~g~ 239 (369)
T 2eez_A 164 VAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGR---VITLTATEANIKKSVQHADLLIGAVLV 239 (369)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTS---EEEEECCHHHHHHHHHHCSEEEECCC-
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCce---EEEecCCHHHHHHHHhCCCEEEECCCC
Confidence 45689999999 99999999999999999999999876542 223332 4567788899999999999999872
Q ss_pred hh--H-------HHHHHHhCCCCeEEEEccc
Q 029118 172 EG--F-------ISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 172 ~G--~-------lldAA~~~GVkRiV~vSS~ 193 (198)
.+ + .++.++. | .+||.+|+.
T Consensus 240 ~~~~~~~li~~~~l~~mk~-g-g~iV~v~~~ 268 (369)
T 2eez_A 240 PGAKAPKLVTRDMLSLMKE-G-AVIVDVAVD 268 (369)
T ss_dssp ------CCSCHHHHTTSCT-T-CEEEECC--
T ss_pred CccccchhHHHHHHHhhcC-C-CEEEEEecC
Confidence 21 1 2333332 2 478888764
|
| >2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.75 E-value=4.4e-05 Score=67.72 Aligned_cols=89 Identities=8% Similarity=0.021 Sum_probs=55.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCccccccc--CCceE-EEEccCCCHHHHHHhhcCccEEEEcC-hh
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESF--GTYVE-SMAGDASNKKFLKTALRGVRSIICPS-EG 173 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~~~~--g~~ve-vV~GDl~D~~sL~~AL~GvDaVIh~a-~G 173 (198)
+++|.|.||||.||+.+++.|.++.+ +++++.++.+...... .+.+. .....+.+.+ .+.++|+||.+. .+
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~g~~~~~~~~~~----~~~~vDvV~~a~g~~ 79 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLRGRTNLKFVPPE----KLEPADILVLALPHG 79 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGTTTCCCBCBCGG----GCCCCSEEEECCCTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhcCcccccccchh----HhcCCCEEEEcCCcH
Confidence 45799999999999999999987654 8888876433221110 00000 0011123332 258999999883 22
Q ss_pred H---HHHHHHhCCCCeEEEEcc
Q 029118 174 F---ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 174 ~---lldAA~~~GVkRiV~vSS 192 (198)
. ++.++.++|+ ++|-+|+
T Consensus 80 ~s~~~a~~~~~aG~-~VId~Sa 100 (345)
T 2ozp_A 80 VFAREFDRYSALAP-VLVDLSA 100 (345)
T ss_dssp HHHHTHHHHHTTCS-EEEECSS
T ss_pred HHHHHHHHHHHCCC-EEEEcCc
Confidence 2 6667778897 5888887
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=97.74 E-value=8.9e-05 Score=64.89 Aligned_cols=90 Identities=12% Similarity=0.131 Sum_probs=66.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc---ccCCceEEEEccCCCHHHHHHhhcCccEEEEcC--h
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALRGVRSIICPS--E 172 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~---~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a--~ 172 (198)
++++|||+|+ |-||..++..+...|.+|.++++++++... .++ .+. ..|..+.+.+.++..++|.||.+. .
T Consensus 187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lG--a~~-v~~~~~~~~~~~~~~~~D~vid~~g~~ 262 (366)
T 1yqd_A 187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFG--ADS-FLVSRDQEQMQAAAGTLDGIIDTVSAV 262 (366)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSC--CSE-EEETTCHHHHHHTTTCEEEEEECCSSC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcC--Cce-EEeccCHHHHHHhhCCCCEEEECCCcH
Confidence 6789999996 999999999999999999999988765432 334 322 246778888888888999999872 1
Q ss_pred ---hHHHHHHHhCCCCeEEEEccc
Q 029118 173 ---GFISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 173 ---G~lldAA~~~GVkRiV~vSS~ 193 (198)
...+++++..| ++|.+++.
T Consensus 263 ~~~~~~~~~l~~~G--~iv~~g~~ 284 (366)
T 1yqd_A 263 HPLLPLFGLLKSHG--KLILVGAP 284 (366)
T ss_dssp CCSHHHHHHEEEEE--EEEECCCC
T ss_pred HHHHHHHHHHhcCC--EEEEEccC
Confidence 12455555444 78887653
|
| >1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* | Back alignment and structure |
|---|
Probab=97.74 E-value=0.00014 Score=63.51 Aligned_cols=67 Identities=21% Similarity=0.265 Sum_probs=48.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC--CcEEEEEeCCcccc--cccC----CceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAM--ESFG----TYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G--~~VralvR~~~~a~--~~~g----~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
++|.|+||+|++|..++..|+.+| ++|+++++++.... .... ..++...+ ...+++|++|+|.||++
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~~~~~~l~~~~~----t~d~~~a~~~aDvVvi~ 75 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLG----PEQLPDCLKGCDVVVIP 75 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEES----GGGHHHHHTTCSEEEEC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhccCcCceEEEecC----CCCHHHHhCCCCEEEEC
Confidence 479999999999999999999888 78999998872111 1111 11222211 13578899999999997
|
| >4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A* | Back alignment and structure |
|---|
Probab=97.73 E-value=0.00016 Score=66.65 Aligned_cols=81 Identities=15% Similarity=0.128 Sum_probs=65.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHh-hcCccEEEEcC---hhH-
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPS---EGF- 174 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~A-L~GvDaVIh~a---~G~- 174 (198)
+.++|.|+ |.+|+++++.|.+.|++|+++.++++..... ..++.||.+|++.|++| ++.+|+||.+. +.+
T Consensus 349 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~----~~~i~gD~t~~~~L~~agi~~ad~vi~~~~~d~~ni 423 (565)
T 4gx0_A 349 ELIFIIGH-GRIGCAAAAFLDRKPVPFILIDRQESPVCND----HVVVYGDATVGQTLRQAGIDRASGIIVTTNDDSTNI 423 (565)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCEEEEESSCCSSCCS----SCEEESCSSSSTHHHHHTTTSCSEEEECCSCHHHHH
T ss_pred CCEEEECC-CHHHHHHHHHHHHCCCCEEEEECChHHHhhc----CCEEEeCCCCHHHHHhcCccccCEEEEECCCchHHH
Confidence 78999998 9999999999999999999999999876543 27999999999999987 57889999872 112
Q ss_pred -HHHHHHhCCCC
Q 029118 175 -ISNAGSLKGVQ 185 (198)
Q Consensus 175 -lldAA~~~GVk 185 (198)
+...|++.+++
T Consensus 424 ~~~~~ak~l~~~ 435 (565)
T 4gx0_A 424 FLTLACRHLHSH 435 (565)
T ss_dssp HHHHHHHHHCSS
T ss_pred HHHHHHHHHCCC
Confidence 33445555554
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=97.72 E-value=2.6e-05 Score=67.60 Aligned_cols=89 Identities=15% Similarity=0.166 Sum_probs=58.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCccccc---ccCCceEEEEccCCCHHH---HHHhhc-CccEEEEcC
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAME---SFGTYVESMAGDASNKKF---LKTALR-GVRSIICPS 171 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~~---~~g~~vevV~GDl~D~~s---L~~AL~-GvDaVIh~a 171 (198)
++||||||+|.||..+++.+...|+ +|.+++|++++... .++. +. ..|..+.+. +.+... ++|.||++.
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~--~~-~~d~~~~~~~~~~~~~~~~~~d~vi~~~ 238 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGF--DA-AINYKKDNVAEQLRESCPAGVDVYFDNV 238 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCC--SE-EEETTTSCHHHHHHHHCTTCEEEEEESC
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCC--ce-EEecCchHHHHHHHHhcCCCCCEEEECC
Confidence 8999999999999999999999999 99999998754322 1342 22 236655332 333222 699999984
Q ss_pred hhH----HHHHHHhCCCCeEEEEccc
Q 029118 172 EGF----ISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 172 ~G~----lldAA~~~GVkRiV~vSS~ 193 (198)
.+. .+++++.. .|+|.++..
T Consensus 239 G~~~~~~~~~~l~~~--G~iv~~G~~ 262 (357)
T 2zb4_A 239 GGNISDTVISQMNEN--SHIILCGQI 262 (357)
T ss_dssp CHHHHHHHHHTEEEE--EEEEECCCG
T ss_pred CHHHHHHHHHHhccC--cEEEEECCc
Confidence 333 23333333 377777643
|
| >2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* | Back alignment and structure |
|---|
Probab=97.72 E-value=4.9e-05 Score=62.16 Aligned_cols=63 Identities=11% Similarity=0.159 Sum_probs=49.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+++|+|.| +|.+|+.+++.|...|++|++..|++++.......++++. ++.++++++|.||.+
T Consensus 28 ~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~--------~~~~~~~~~DvVi~a 90 (215)
T 2vns_A 28 APKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPSAAQVT--------FQEEAVSSPEVIFVA 90 (215)
T ss_dssp -CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBTTSEEE--------EHHHHTTSCSEEEEC
T ss_pred CCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcee--------cHHHHHhCCCEEEEC
Confidence 46799999 8999999999999999999999998766543322244432 356778999999987
|
| >5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* | Back alignment and structure |
|---|
Probab=97.72 E-value=1.2e-05 Score=71.22 Aligned_cols=89 Identities=18% Similarity=0.129 Sum_probs=58.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC--c-----EEEEEeCCc--cc----ccccC---CceEEEEccCCCHHHHHHhhc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRT--R-----IKALVKDKR--NA----MESFG---TYVESMAGDASNKKFLKTALR 162 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~--~-----VralvR~~~--~a----~~~~g---~~vevV~GDl~D~~sL~~AL~ 162 (198)
.++|+||||+|+||++++..|+..+. + ++.+.+++. .+ ..+.. +... ++.......++++
T Consensus 3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~----~~~~~~~~~~~~~ 78 (333)
T 5mdh_A 3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLK----DVIATDKEEIAFK 78 (333)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEE----EEEEESCHHHHTT
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccC----CEEEcCCcHHHhC
Confidence 45899999999999999999988775 5 888877542 11 11110 1111 2222234578899
Q ss_pred CccEEEEcC-----hh---------------HHHHHHHhCCCC--eEEEEc
Q 029118 163 GVRSIICPS-----EG---------------FISNAGSLKGVQ--HVILLS 191 (198)
Q Consensus 163 GvDaVIh~a-----~G---------------~lldAA~~~GVk--RiV~vS 191 (198)
|+|.||+++ .| .+++++++.+.+ +|+.+|
T Consensus 79 daDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvs 129 (333)
T 5mdh_A 79 DLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVG 129 (333)
T ss_dssp TCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcC
Confidence 999999982 11 167888888876 466555
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=97.71 E-value=2.6e-05 Score=66.81 Aligned_cols=91 Identities=15% Similarity=0.133 Sum_probs=59.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc--cccCCceEEEEccCCCHHHHHHhh-----cCccEEEEc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM--ESFGTYVESMAGDASNKKFLKTAL-----RGVRSIICP 170 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~--~~~g~~vevV~GDl~D~~sL~~AL-----~GvDaVIh~ 170 (198)
++++||||||+|.||..+++.+...|++|.+++|++++.. ..++ .. ...|..+.+.+.+.+ .++|.||++
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g--~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi~~ 221 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIG--FD-AAFNYKTVNSLEEALKKASPDGYDCYFDN 221 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT--CS-EEEETTSCSCHHHHHHHHCTTCEEEEEES
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcC--Cc-EEEecCCHHHHHHHHHHHhCCCCeEEEEC
Confidence 4678999999999999999999999999999998765532 2233 22 223666623333322 368999998
Q ss_pred ChhHHHHH----HHhCCCCeEEEEccc
Q 029118 171 SEGFISNA----GSLKGVQHVILLSQG 193 (198)
Q Consensus 171 a~G~lldA----A~~~GVkRiV~vSS~ 193 (198)
+.+..++. .+.. .|+|.++..
T Consensus 222 ~g~~~~~~~~~~l~~~--G~~v~~g~~ 246 (333)
T 1v3u_A 222 VGGEFLNTVLSQMKDF--GKIAICGAI 246 (333)
T ss_dssp SCHHHHHHHHTTEEEE--EEEEECCCC
T ss_pred CChHHHHHHHHHHhcC--CEEEEEecc
Confidence 43322222 2222 377777653
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=97.71 E-value=2.5e-05 Score=67.99 Aligned_cols=90 Identities=18% Similarity=0.143 Sum_probs=60.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc--ccCCceEEEEccCCCHH---HHHHhh--cCccEEEEc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASNKK---FLKTAL--RGVRSIICP 170 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~--~~g~~vevV~GDl~D~~---sL~~AL--~GvDaVIh~ 170 (198)
++++||||||+|.||..+++.+...|++|.+++|++++... .++. +. ..|..+.+ .+.++. .++|.||.+
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~--~~-~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 238 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGA--AA-GFNYKKEDFSEATLKFTKGAGVNLILDC 238 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTC--SE-EEETTTSCHHHHHHHHTTTSCEEEEEES
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCC--cE-EEecCChHHHHHHHHHhcCCCceEEEEC
Confidence 46789999999999999999999999999999998765432 2332 22 23555543 333333 379999988
Q ss_pred Chh-H---HHHHHHhCCCCeEEEEcc
Q 029118 171 SEG-F---ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 171 a~G-~---lldAA~~~GVkRiV~vSS 192 (198)
..+ . .+++++.. .++|.++.
T Consensus 239 ~G~~~~~~~~~~l~~~--G~iv~~G~ 262 (354)
T 2j8z_A 239 IGGSYWEKNVNCLALD--GRWVLYGL 262 (354)
T ss_dssp SCGGGHHHHHHHEEEE--EEEEECCC
T ss_pred CCchHHHHHHHhccCC--CEEEEEec
Confidence 422 2 33444433 37777764
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=97.70 E-value=2.9e-05 Score=67.85 Aligned_cols=92 Identities=18% Similarity=0.206 Sum_probs=60.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc--ccCCceEEEEccCCCHH---HHHHhh-cCccEEEEc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASNKK---FLKTAL-RGVRSIICP 170 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~--~~g~~vevV~GDl~D~~---sL~~AL-~GvDaVIh~ 170 (198)
.++++|||+||+|.||..+++.+...|++|.+++|++++... .++ .+.+ .|..+.+ .+.+.. .|+|.||.+
T Consensus 162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~G--a~~~-~~~~~~~~~~~~~~~~~~g~D~vid~ 238 (362)
T 2c0c_A 162 SEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLG--CDRP-INYKTEPVGTVLKQEYPEGVDVVYES 238 (362)
T ss_dssp CTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT--CSEE-EETTTSCHHHHHHHHCTTCEEEEEEC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcC--CcEE-EecCChhHHHHHHHhcCCCCCEEEEC
Confidence 356799999999999999999999999999999998755322 234 2222 2343322 222222 479999988
Q ss_pred ChhH----HHHHHHhCCCCeEEEEccc
Q 029118 171 SEGF----ISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 171 a~G~----lldAA~~~GVkRiV~vSS~ 193 (198)
..+. .+++++..| |+|.+++.
T Consensus 239 ~g~~~~~~~~~~l~~~G--~iv~~g~~ 263 (362)
T 2c0c_A 239 VGGAMFDLAVDALATKG--RLIVIGFI 263 (362)
T ss_dssp SCTHHHHHHHHHEEEEE--EEEECCCG
T ss_pred CCHHHHHHHHHHHhcCC--EEEEEeCC
Confidence 3222 445555544 88888764
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=97.69 E-value=2.4e-05 Score=67.21 Aligned_cols=90 Identities=13% Similarity=0.149 Sum_probs=58.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc---ccCCceEEEEccCCCH----HHHHHhh-cCccEEEE
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNK----KFLKTAL-RGVRSIIC 169 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~---~~g~~vevV~GDl~D~----~sL~~AL-~GvDaVIh 169 (198)
++++|||+||+|.||..+++.+...|++|.+++|++++... .++ ...+ .|+.+. +.+.+.. .++|.||.
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g--~~~~-~d~~~~~~~~~~~~~~~~~~~d~vi~ 231 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFG--FDDA-FNYKEESDLTAALKRCFPNGIDIYFE 231 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSC--CSEE-EETTSCSCSHHHHHHHCTTCEEEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC--CceE-EecCCHHHHHHHHHHHhCCCCcEEEE
Confidence 46789999999999999999999999999999998765432 234 2222 255543 2233322 37999998
Q ss_pred cChhHHH----HHHHhCCCCeEEEEcc
Q 029118 170 PSEGFIS----NAGSLKGVQHVILLSQ 192 (198)
Q Consensus 170 ~a~G~ll----dAA~~~GVkRiV~vSS 192 (198)
+..+..+ ++.+.. .++|.++.
T Consensus 232 ~~g~~~~~~~~~~l~~~--G~~v~~G~ 256 (345)
T 2j3h_A 232 NVGGKMLDAVLVNMNMH--GRIAVCGM 256 (345)
T ss_dssp SSCHHHHHHHHTTEEEE--EEEEECCC
T ss_pred CCCHHHHHHHHHHHhcC--CEEEEEcc
Confidence 8422222 222332 37777654
|
| >1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A* | Back alignment and structure |
|---|
Probab=97.65 E-value=1.5e-05 Score=68.68 Aligned_cols=87 Identities=10% Similarity=0.065 Sum_probs=50.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHH-CCCcEEEEEeC-Cccc-ccccCCceEEEEccCCCHHHHHHhhcCccEEEEc-Ch-h
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIV-KRTRIKALVKD-KRNA-MESFGTYVESMAGDASNKKFLKTALRGVRSIICP-SE-G 173 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~-~G~~VralvR~-~~~a-~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~-a~-G 173 (198)
+++|+|+|+||++|+++++.+.+ .++++.++++. +++. ....+.-..+-..++...+.+.++++++|+||.+ .. .
T Consensus 5 ~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~~~DvVIDft~p~~ 84 (273)
T 1dih_A 5 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFTRPEG 84 (273)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCSEEEECSCHHH
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhcCCCEEEEcCChHH
Confidence 36899999999999999998874 58888866643 3221 0000000000001111112334566788999965 21 1
Q ss_pred --HHHHHHHhCCCC
Q 029118 174 --FISNAGSLKGVQ 185 (198)
Q Consensus 174 --~lldAA~~~GVk 185 (198)
..+++|.++|+.
T Consensus 85 ~~~~~~~a~~~G~~ 98 (273)
T 1dih_A 85 TLNHLAFCRQHGKG 98 (273)
T ss_dssp HHHHHHHHHHTTCE
T ss_pred HHHHHHHHHhCCCC
Confidence 266777777765
|
| >1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A | Back alignment and structure |
|---|
Probab=97.63 E-value=8.6e-05 Score=66.27 Aligned_cols=86 Identities=12% Similarity=0.142 Sum_probs=56.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC-CcEEEEEeCCccccc---c---cCCceEEEEccCCCHHHHHHhhcCccEEEEcC-
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAME---S---FGTYVESMAGDASNKKFLKTALRGVRSIICPS- 171 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G-~~VralvR~~~~a~~---~---~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a- 171 (198)
.+|.|.||||.||+.+++.|.++. .+++++.+..+.... . +...+ ..|+.-.+ .+.++++|.||.+.
T Consensus 17 ~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~~~~v---~~dl~~~~--~~~~~~vDvVf~atp 91 (359)
T 1xyg_A 17 IRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRAQK---LPTLVSVK--DADFSTVDAVFCCLP 91 (359)
T ss_dssp EEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGGTTSC---CCCCBCGG--GCCGGGCSEEEECCC
T ss_pred cEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchhcCcc---cccceecc--hhHhcCCCEEEEcCC
Confidence 579999999999999999998875 488888754322111 1 11111 13333222 44567999999883
Q ss_pred hhH---HHHHHHhCCCCeEEEEcc
Q 029118 172 EGF---ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 172 ~G~---lldAA~~~GVkRiV~vSS 192 (198)
.++ .+..+ ++|+ ++|-+|+
T Consensus 92 ~~~s~~~a~~~-~aG~-~VId~sa 113 (359)
T 1xyg_A 92 HGTTQEIIKEL-PTAL-KIVDLSA 113 (359)
T ss_dssp TTTHHHHHHTS-CTTC-EEEECSS
T ss_pred chhHHHHHHHH-hCCC-EEEECCc
Confidence 332 56666 7787 5777776
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=97.61 E-value=6.8e-05 Score=63.47 Aligned_cols=89 Identities=13% Similarity=0.145 Sum_probs=59.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc--ccCCceEEEEccCCCHHHHHHhhcCccEEEEcChhH-
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF- 174 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~--~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a~G~- 174 (198)
++++|||+||+|.+|..++..+...|++|.+++|++++... .++ .+.+ .|..+.+.+.+.++|+|.||. ..+.
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g--a~~~-~~~~~~~~~~~~~~~~d~vid-~g~~~ 200 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALG--AEEA-ATYAEVPERAKAWGGLDLVLE-VRGKE 200 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTT--CSEE-EEGGGHHHHHHHTTSEEEEEE-CSCTT
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcC--CCEE-EECCcchhHHHHhcCceEEEE-CCHHH
Confidence 57899999999999999999999999999999998766432 233 3322 355541344555689999999 5322
Q ss_pred ---HHHHHHhCCCCeEEEEcc
Q 029118 175 ---ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 175 ---lldAA~~~GVkRiV~vSS 192 (198)
.+++++..| |+|.++.
T Consensus 201 ~~~~~~~l~~~G--~~v~~g~ 219 (302)
T 1iz0_A 201 VEESLGLLAHGG--RLVYIGA 219 (302)
T ss_dssp HHHHHTTEEEEE--EEEEC--
T ss_pred HHHHHHhhccCC--EEEEEeC
Confidence 233333333 6776654
|
| >1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=97.61 E-value=0.00012 Score=64.68 Aligned_cols=89 Identities=15% Similarity=0.105 Sum_probs=54.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC-CcEEEEEeCCccccc----ccCCceE----EEEccC----CCHHHHHHhhc-Ccc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAME----SFGTYVE----SMAGDA----SNKKFLKTALR-GVR 165 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G-~~VralvR~~~~a~~----~~g~~ve----vV~GDl----~D~~sL~~AL~-GvD 165 (198)
++|.|.||||.||+.+++.|.++. .+|+++.|++..+.. ..+...+ .-..|+ .|++ +.++ ++|
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~D 85 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPTDPK---HEEFEDVD 85 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEESCTT---SGGGTTCC
T ss_pred ceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCceeeEEEeCCHH---HHhcCCCC
Confidence 479999999999999999988764 588888875432211 1111000 000111 1322 2346 999
Q ss_pred EEEEcC-hhH---HHHHHHhCCCCeEEEEcc
Q 029118 166 SIICPS-EGF---ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 166 aVIh~a-~G~---lldAA~~~GVkRiV~vSS 192 (198)
.||.+. .+. ++..+.++|++ +|-.|+
T Consensus 86 vV~~atp~~~~~~~a~~~~~aG~~-VId~s~ 115 (354)
T 1ys4_A 86 IVFSALPSDLAKKFEPEFAKEGKL-IFSNAS 115 (354)
T ss_dssp EEEECCCHHHHHHHHHHHHHTTCE-EEECCS
T ss_pred EEEECCCchHHHHHHHHHHHCCCE-EEECCc
Confidence 999883 222 66667788876 666654
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=97.60 E-value=0.0001 Score=63.09 Aligned_cols=94 Identities=12% Similarity=0.115 Sum_probs=60.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-cCCceEEEEccCCCHHHHHHhh----cCccEEEEcC
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-FGTYVESMAGDASNKKFLKTAL----RGVRSIICPS 171 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-~g~~vevV~GDl~D~~sL~~AL----~GvDaVIh~a 171 (198)
.++++|||+||+|-||..+++.+...|++|.+++|++++.... ...++.. ..|..+.+..+... .|+|.||.+.
T Consensus 148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 226 (336)
T 4b7c_A 148 KNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDG-AIDYKNEDLAAGLKRECPKGIDVFFDNV 226 (336)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSE-EEETTTSCHHHHHHHHCTTCEEEEEESS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCE-EEECCCHHHHHHHHHhcCCCceEEEECC
Confidence 3577999999999999999999999999999999987654322 1122322 23555543333222 3799999884
Q ss_pred hhH----HHHHHHhCCCCeEEEEccc
Q 029118 172 EGF----ISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 172 ~G~----lldAA~~~GVkRiV~vSS~ 193 (198)
.+. .+++.+.. .|+|.++..
T Consensus 227 g~~~~~~~~~~l~~~--G~iv~~G~~ 250 (336)
T 4b7c_A 227 GGEILDTVLTRIAFK--ARIVLCGAI 250 (336)
T ss_dssp CHHHHHHHHTTEEEE--EEEEECCCG
T ss_pred CcchHHHHHHHHhhC--CEEEEEeec
Confidence 332 22223333 477777654
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.57 E-value=7.5e-05 Score=65.11 Aligned_cols=90 Identities=16% Similarity=0.119 Sum_probs=59.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc--ccCCceEEEEccCCCHHH---HHHhhc--CccEEEEc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASNKKF---LKTALR--GVRSIICP 170 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~--~~g~~vevV~GDl~D~~s---L~~AL~--GvDaVIh~ 170 (198)
++++||||||+|.||..+++.+...|++|.+++|++++... .++ .+. ..|..+.+. +.+... ++|.||.+
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g--a~~-~~d~~~~~~~~~~~~~~~~~~~D~vi~~ 246 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNG--AHE-VFNHREVNYIDKIKKYVGEKGIDIIIEM 246 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT--CSE-EEETTSTTHHHHHHHHHCTTCEEEEEES
T ss_pred CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcC--CCE-EEeCCCchHHHHHHHHcCCCCcEEEEEC
Confidence 46789999999999999999999999999999998765432 233 222 235555433 333333 79999998
Q ss_pred ChhH----HHHHHHhCCCCeEEEEcc
Q 029118 171 SEGF----ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 171 a~G~----lldAA~~~GVkRiV~vSS 192 (198)
..+. .+++.+.. .|+|.++.
T Consensus 247 ~G~~~~~~~~~~l~~~--G~iv~~g~ 270 (351)
T 1yb5_A 247 LANVNLSKDLSLLSHG--GRVIVVGS 270 (351)
T ss_dssp CHHHHHHHHHHHEEEE--EEEEECCC
T ss_pred CChHHHHHHHHhccCC--CEEEEEec
Confidence 5322 23333333 36776653
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=97.53 E-value=8.8e-05 Score=63.64 Aligned_cols=91 Identities=16% Similarity=0.161 Sum_probs=60.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc--cccCCceEEEEccCCCH---HHHHHhh--cCccEEEE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM--ESFGTYVESMAGDASNK---KFLKTAL--RGVRSIIC 169 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~--~~~g~~vevV~GDl~D~---~sL~~AL--~GvDaVIh 169 (198)
.++++|||+||+|.+|..++..+...|.+|.+++|++++.. ..++.. .++ |..+. +.+.+.. +|+|.||.
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~-~~~--~~~~~~~~~~~~~~~~~~g~D~vid 223 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAE-YLI--NASKEDILRQVLKFTNGKGVDASFD 223 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCS-EEE--ETTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCc-EEE--eCCCchHHHHHHHHhCCCCceEEEE
Confidence 45789999999999999999999999999999999776543 223421 222 34333 3344443 37899998
Q ss_pred cChhH----HHHHHHhCCCCeEEEEcc
Q 029118 170 PSEGF----ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 170 ~a~G~----lldAA~~~GVkRiV~vSS 192 (198)
+..+. .+++.+..| ++|.++.
T Consensus 224 ~~g~~~~~~~~~~l~~~G--~iv~~G~ 248 (334)
T 3qwb_A 224 SVGKDTFEISLAALKRKG--VFVSFGN 248 (334)
T ss_dssp CCGGGGHHHHHHHEEEEE--EEEECCC
T ss_pred CCChHHHHHHHHHhccCC--EEEEEcC
Confidence 84222 344444443 6777654
|
| >1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A* | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00041 Score=59.15 Aligned_cols=93 Identities=12% Similarity=0.102 Sum_probs=61.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHHC-CCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhh-----cCccEEEEcC--
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL-----RGVRSIICPS-- 171 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~-G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL-----~GvDaVIh~a-- 171 (198)
++|+|.||+|.+|+.+++.+.+. ++++.+.+..............+ +..|++.|+.+.+.+ .|++.|+.+.
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~~~~D-vvIDfT~p~a~~~~~~~a~~~g~~~VigTTG~ 79 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTDGNTE-VVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGF 79 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHHTTCC-EEEECSCTTTHHHHHHHHHHTTCEEEECCCCC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhccCCc-EEEEccChHHHHHHHHHHHHcCCCEEEcCCCC
Confidence 47999999999999999998865 89999887654333222212234 677888888777544 4788888652
Q ss_pred -hh---HHHHHHHhC-CCCeEEEEcccc
Q 029118 172 -EG---FISNAGSLK-GVQHVILLSQGA 194 (198)
Q Consensus 172 -~G---~lldAA~~~-GVkRiV~vSS~~ 194 (198)
.. .+.++|+++ ++ .+|+.+..+
T Consensus 80 ~~e~~~~l~~aa~~~~~~-~vv~a~N~s 106 (245)
T 1p9l_A 80 TAERFQQVESWLVAKPNT-SVLIAPNFA 106 (245)
T ss_dssp CHHHHHHHHHHHHTSTTC-EEEECSCCC
T ss_pred CHHHHHHHHHHHHhCCCC-CEEEECCcc
Confidence 11 145555655 54 556665543
|
| >1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A* | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00044 Score=62.04 Aligned_cols=89 Identities=17% Similarity=0.128 Sum_probs=53.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHH-CCC---cEEEEEeCCc-ccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC-h
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIV-KRT---RIKALVKDKR-NAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-E 172 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~-~G~---~VralvR~~~-~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a-~ 172 (198)
+++|.|.||||.+|+.++++|++ +++ +++.+..+.. +....+. +.++...+..|++. ++++|.||.+. .
T Consensus 1 m~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s~G~~v~~~~-g~~i~~~~~~~~~~----~~~~DvVf~a~g~ 75 (367)
T 1t4b_A 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFG-GTTGTLQDAFDLEA----LKALDIIVTCQGG 75 (367)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGG-TCCCBCEETTCHHH----HHTCSEEEECSCH
T ss_pred CcEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCCCCCCccccC-CCceEEEecCChHH----hcCCCEEEECCCc
Confidence 35899999999999999995555 444 3455554321 1111111 12344445556655 35999999883 2
Q ss_pred hH---HHHHHHhCCCCe-EEEEcc
Q 029118 173 GF---ISNAGSLKGVQH-VILLSQ 192 (198)
Q Consensus 173 G~---lldAA~~~GVkR-iV~vSS 192 (198)
+. +...+.++|++. +|=.||
T Consensus 76 ~~s~~~a~~~~~~G~k~vVID~ss 99 (367)
T 1t4b_A 76 DYTNEIYPKLRESGWQGYWIDAAS 99 (367)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECSS
T ss_pred hhHHHHHHHHHHCCCCEEEEcCCh
Confidence 32 667778889864 333443
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=97.46 E-value=0.0005 Score=62.98 Aligned_cols=93 Identities=17% Similarity=0.252 Sum_probs=71.8
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccccc--CCceEEEEccCCCHHHHHHh-hcCccEEEEcC-
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTA-LRGVRSIICPS- 171 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~--g~~vevV~GDl~D~~sL~~A-L~GvDaVIh~a- 171 (198)
+.+.++|+|.| .|.+|.++++.| +++++|+++-++++++.... -+++.++.||.+|++.|.++ ++.+|++|.+.
T Consensus 232 ~~~~~~v~I~G-gG~ig~~lA~~L-~~~~~v~iIE~d~~r~~~la~~l~~~~Vi~GD~td~~~L~ee~i~~~D~~ia~T~ 309 (461)
T 4g65_A 232 EKPYRRIMIVG-GGNIGASLAKRL-EQTYSVKLIERNLQRAEKLSEELENTIVFCGDAADQELLTEENIDQVDVFIALTN 309 (461)
T ss_dssp GSCCCEEEEEC-CSHHHHHHHHHH-TTTSEEEEEESCHHHHHHHHHHCTTSEEEESCTTCHHHHHHTTGGGCSEEEECCS
T ss_pred cccccEEEEEc-chHHHHHHHHHh-hhcCceEEEecCHHHHHHHHHHCCCceEEeccccchhhHhhcCchhhcEEEEccc
Confidence 34456788877 689999999986 67899999999887654321 14688999999999999987 78999999882
Q ss_pred --hhH--HHHHHHhCCCCeEEEE
Q 029118 172 --EGF--ISNAGSLKGVQHVILL 190 (198)
Q Consensus 172 --~G~--lldAA~~~GVkRiV~v 190 (198)
+-+ ..-.|++.|++|+|-.
T Consensus 310 ~De~Ni~~~llAk~~gv~kvIa~ 332 (461)
T 4g65_A 310 EDETNIMSAMLAKRMGAKKVMVL 332 (461)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CcHHHHHHHHHHHHcCCcccccc
Confidence 233 3345788999998864
|
| >4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A* | Back alignment and structure |
|---|
Probab=97.45 E-value=0.0004 Score=64.03 Aligned_cols=90 Identities=14% Similarity=0.131 Sum_probs=68.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCC-ceEEEEccCCCHHHHHHh-hcCccEEEEcC-h-h
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTA-LRGVRSIICPS-E-G 173 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~-~vevV~GDl~D~~sL~~A-L~GvDaVIh~a-~-G 173 (198)
.++.|+|.|+ |.+|+++++.|.+.|++|.++..+++........ ++.++.||.+|++.|++| ++.+++||.+. + -
T Consensus 126 ~~~hviI~G~-g~~g~~la~~L~~~~~~vvvid~~~~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~a~~vi~t~~D~~ 204 (565)
T 4gx0_A 126 TRGHILIFGI-DPITRTLIRKLESRNHLFVVVTDNYDQALHLEEQEGFKVVYGSPTDAHVLAGLRVAAARSIIANLSDPD 204 (565)
T ss_dssp CCSCEEEESC-CHHHHHHHHHTTTTTCCEEEEESCHHHHHHHHHSCSSEEEESCTTCHHHHHHTTGGGCSEEEECSCHHH
T ss_pred cCCeEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCCeEEEeCCCCHHHHHhcCcccCCEEEEeCCcHH
Confidence 3457999996 7899999999999999999999988765444334 689999999999999988 68899998762 1 1
Q ss_pred H--HHHHHHhCCCCeEE
Q 029118 174 F--ISNAGSLKGVQHVI 188 (198)
Q Consensus 174 ~--lldAA~~~GVkRiV 188 (198)
+ +...+++.+..++|
T Consensus 205 n~~~~~~ar~~~~~~ii 221 (565)
T 4gx0_A 205 NANLCLTVRSLCQTPII 221 (565)
T ss_dssp HHHHHHHHHTTCCCCEE
T ss_pred HHHHHHHHHHhcCceEE
Confidence 1 33345555544443
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00012 Score=63.28 Aligned_cols=90 Identities=16% Similarity=0.069 Sum_probs=59.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCccccc--ccCCceEEEEccCCCHH---HHHHhh--cCccEEEE
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAME--SFGTYVESMAGDASNKK---FLKTAL--RGVRSIIC 169 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~~--~~g~~vevV~GDl~D~~---sL~~AL--~GvDaVIh 169 (198)
++++|||+|| |.+|..++..+...|+ +|.+++|++++... .++ ++.+ .|..+.+ .+.++. +|+|.||.
T Consensus 167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~G--a~~~-~~~~~~~~~~~v~~~~~g~g~D~vid 242 (348)
T 2d8a_A 167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVG--ADYV-INPFEEDVVKEVMDITDGNGVDVFLE 242 (348)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHT--CSEE-ECTTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhC--CCEE-ECCCCcCHHHHHHHHcCCCCCCEEEE
Confidence 6789999999 9999999999988999 99999988765422 233 2222 2444432 333333 37999998
Q ss_pred cCh--hH---HHHHHHhCCCCeEEEEccc
Q 029118 170 PSE--GF---ISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 170 ~a~--G~---lldAA~~~GVkRiV~vSS~ 193 (198)
+.. .. .+++++..| ++|.+++.
T Consensus 243 ~~g~~~~~~~~~~~l~~~G--~iv~~g~~ 269 (348)
T 2d8a_A 243 FSGAPKALEQGLQAVTPAG--RVSLLGLY 269 (348)
T ss_dssp CSCCHHHHHHHHHHEEEEE--EEEECCCC
T ss_pred CCCCHHHHHHHHHHHhcCC--EEEEEccC
Confidence 832 22 344444444 78887653
|
| >2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00031 Score=62.00 Aligned_cols=85 Identities=16% Similarity=0.155 Sum_probs=52.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEe--CCccc---ccccCCceEEEEccCCCHHHHHHhhcCccEEEEcCh-h
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVK--DKRNA---MESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE-G 173 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR--~~~~a---~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a~-G 173 (198)
++|.|.||||.||+.+++.|.+++|++..+.. +.+.. ....+..+.+. +. |++ . + |+|.||.+.. +
T Consensus 1 mkVaI~GAtG~iG~~llr~L~~~~~~~~~l~~~~s~~~~g~~l~~~g~~i~v~--~~-~~~---~-~-~~DvV~~a~g~~ 72 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKVLEARNFPLSELRLYASPRSAGVRLAFRGEEIPVE--PL-PEG---P-L-PVDLVLASAGGG 72 (331)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCCEEEECGGGSSCEEEETTEEEEEE--EC-CSS---C-C-CCSEEEECSHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEeeccccCCCEEEEcCceEEEE--eC-Chh---h-c-CCCEEEECCCcc
Confidence 46999999999999999999988887655431 11111 01111122332 33 332 2 4 9999999842 2
Q ss_pred H---HHHHHHhCCCCeEEEEccc
Q 029118 174 F---ISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 174 ~---lldAA~~~GVkRiV~vSS~ 193 (198)
. ......++|+ ++|-+|+.
T Consensus 73 ~s~~~a~~~~~~G~-~vId~s~~ 94 (331)
T 2yv3_A 73 ISRAKALVWAEGGA-LVVDNSSA 94 (331)
T ss_dssp HHHHHHHHHHHTTC-EEEECSSS
T ss_pred chHHHHHHHHHCCC-EEEECCCc
Confidence 2 5566667787 57777764
|
| >3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00066 Score=60.42 Aligned_cols=89 Identities=15% Similarity=0.063 Sum_probs=56.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHH-CCCcEEEEEeCC---ccc---ccc---cCC--ceEEEEccCCCHHHHHHhhcCcc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIV-KRTRIKALVKDK---RNA---MES---FGT--YVESMAGDASNKKFLKTALRGVR 165 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~-~G~~VralvR~~---~~a---~~~---~g~--~vevV~GDl~D~~sL~~AL~GvD 165 (198)
++++|.|.||||.+|+.+++.|.+ ..+++.++..+. +.. .+. +.. ...+... .|++ +.++++|
T Consensus 3 ~M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~--~~~~---~~~~~~D 77 (337)
T 3dr3_A 3 AMLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPM--SDIS---EFSPGVD 77 (337)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEE--SSGG---GTCTTCS
T ss_pred CceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEecc--CCHH---HHhcCCC
Confidence 467899999999999999999988 456888886544 211 111 111 1222221 0222 2238999
Q ss_pred EEEEc-ChhH---HHHHHHhCCCCeEEEEcc
Q 029118 166 SIICP-SEGF---ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 166 aVIh~-a~G~---lldAA~~~GVkRiV~vSS 192 (198)
.||.+ ..+. ++..+.++|+ ++|=+|+
T Consensus 78 vvf~a~p~~~s~~~~~~~~~~g~-~vIDlSa 107 (337)
T 3dr3_A 78 VVFLATAHEVSHDLAPQFLEAGC-VVFDLSG 107 (337)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTC-EEEECSS
T ss_pred EEEECCChHHHHHHHHHHHHCCC-EEEEcCC
Confidence 99988 3332 5666677887 4666665
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00028 Score=62.25 Aligned_cols=74 Identities=8% Similarity=0.094 Sum_probs=57.5
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeC---Ccccccc---cC--CceEEEEccCCCHHHHHHhhcCccE
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKD---KRNAMES---FG--TYVESMAGDASNKKFLKTALRGVRS 166 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~---~~~a~~~---~g--~~vevV~GDl~D~~sL~~AL~GvDa 166 (198)
+..++++||+|| |.+|+.++..|.+.|. +|.+..|+ .+++.+. +. ..+++...++.+.+.+.+++..+|.
T Consensus 151 ~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDi 229 (315)
T 3tnl_A 151 DIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVI 229 (315)
T ss_dssp CCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSE
T ss_pred CccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCE
Confidence 356789999998 8999999999999998 89999998 4444321 11 1244555678888889999999999
Q ss_pred EEEc
Q 029118 167 IICP 170 (198)
Q Consensus 167 VIh~ 170 (198)
||++
T Consensus 230 IINa 233 (315)
T 3tnl_A 230 FTNA 233 (315)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9986
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00067 Score=62.23 Aligned_cols=74 Identities=16% Similarity=0.161 Sum_probs=59.1
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHH-HCCCcEEEEEeCCcccc------------------cccCCceEEEEccCCCHHHH
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLI-VKRTRIKALVKDKRNAM------------------ESFGTYVESMAGDASNKKFL 157 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll-~~G~~VralvR~~~~a~------------------~~~g~~vevV~GDl~D~~sL 157 (198)
...+++|||||+..+|.+....|. ..|..|.++.|+.++.. +..|.....+.+|+.|++.+
T Consensus 48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i 127 (401)
T 4ggo_A 48 KAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIK 127 (401)
T ss_dssp CCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHH
Confidence 346789999999999999988887 57999999987654321 12356788999999999998
Q ss_pred HHhh-------cCccEEEEc
Q 029118 158 KTAL-------RGVRSIICP 170 (198)
Q Consensus 158 ~~AL-------~GvDaVIh~ 170 (198)
++++ -++|.+||.
T Consensus 128 ~~vi~~i~~~~G~IDiLVhS 147 (401)
T 4ggo_A 128 AQVIEEAKKKGIKFDLIVYS 147 (401)
T ss_dssp HHHHHHHHHTTCCEEEEEEC
T ss_pred HHHHHHHHHhcCCCCEEEEe
Confidence 8876 478999997
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00014 Score=62.68 Aligned_cols=91 Identities=13% Similarity=0.160 Sum_probs=60.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc--ccCCceEEEEccCCCH---HHHHHhhcCccEEEEcC
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASNK---KFLKTALRGVRSIICPS 171 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~--~~g~~vevV~GDl~D~---~sL~~AL~GvDaVIh~a 171 (198)
.++++|||+|| |.+|..++..+...|.+|.+++|++++... .++ ++.+ .|..+. +.+.++..++|.||.+.
T Consensus 163 ~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lG--a~~~-~d~~~~~~~~~~~~~~~~~d~vid~~ 238 (339)
T 1rjw_A 163 KPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELG--ADLV-VNPLKEDAAKFMKEKVGGVHAAVVTA 238 (339)
T ss_dssp CTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT--CSEE-ECTTTSCHHHHHHHHHSSEEEEEESS
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCC--CCEE-ecCCCccHHHHHHHHhCCCCEEEECC
Confidence 35789999999 669999999999999999999988765432 233 3322 355543 23334346899999883
Q ss_pred h--hH---HHHHHHhCCCCeEEEEccc
Q 029118 172 E--GF---ISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 172 ~--G~---lldAA~~~GVkRiV~vSS~ 193 (198)
. .. .+++.+..| ++|.+++.
T Consensus 239 g~~~~~~~~~~~l~~~G--~~v~~g~~ 263 (339)
T 1rjw_A 239 VSKPAFQSAYNSIRRGG--ACVLVGLP 263 (339)
T ss_dssp CCHHHHHHHHHHEEEEE--EEEECCCC
T ss_pred CCHHHHHHHHHHhhcCC--EEEEeccc
Confidence 2 22 344444444 78777653
|
| >3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A | Back alignment and structure |
|---|
Probab=97.39 E-value=0.0008 Score=60.62 Aligned_cols=85 Identities=16% Similarity=0.180 Sum_probs=52.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCc---EEEEEeCCc--ccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC-hh
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTR---IKALVKDKR--NAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-EG 173 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~---VralvR~~~--~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a-~G 173 (198)
.+|.|.||||++|+.+++.|.+++|+ ++.+.-..+ +.....+ .+...-++.. +.+.++|.||.+. .+
T Consensus 3 ~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~~~~~--~~~~~~~~~~-----~~~~~~Dvvf~a~~~~ 75 (366)
T 3pwk_A 3 YTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFKD--QDITIEETTE-----TAFEGVDIALFSAGSS 75 (366)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEEEETT--EEEEEEECCT-----TTTTTCSEEEECSCHH
T ss_pred cEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCcceecC--CCceEeeCCH-----HHhcCCCEEEECCChH
Confidence 57999999999999999988887664 444442111 1111112 2333223321 2368999999883 22
Q ss_pred H---HHHHHHhCCCCeEEEEcc
Q 029118 174 F---ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 174 ~---lldAA~~~GVkRiV~vSS 192 (198)
. +...+.++|+ ++|=+|+
T Consensus 76 ~s~~~a~~~~~~G~-~vIDlSa 96 (366)
T 3pwk_A 76 TSAKYAPYAVKAGV-VVVDNTS 96 (366)
T ss_dssp HHHHHHHHHHHTTC-EEEECSS
T ss_pred hHHHHHHHHHHCCC-EEEEcCC
Confidence 2 5666677887 5676776
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00043 Score=76.32 Aligned_cols=65 Identities=11% Similarity=0.126 Sum_probs=54.3
Q ss_pred CCCCeEEEEcCCCh-HHHHHHHHHHHCCCcEEEEEeCCcc-----ccc------ccCCceEEEEccCCCHHHHHHhh
Q 029118 97 EARDAVLVTDGDSD-IGQMVILSLIVKRTRIKALVKDKRN-----AME------SFGTYVESMAGDASNKKFLKTAL 161 (198)
Q Consensus 97 ~~~~~ILVTGATGf-IG~~Vvr~Ll~~G~~VralvR~~~~-----a~~------~~g~~vevV~GDl~D~~sL~~AL 161 (198)
..++++|||||++. ||+.+++.|+++|++|.+..|+.+. ..+ ..+..+..+.+|++|++++++++
T Consensus 2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv 2210 (3089)
T 3zen_D 2134 XXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLV 2210 (3089)
T ss_dssp CCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHH
T ss_pred CCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHH
Confidence 56789999999999 9999999999999999999998765 211 12345788999999999988774
|
| >3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=97.35 E-value=0.0017 Score=56.37 Aligned_cols=84 Identities=12% Similarity=0.095 Sum_probs=61.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcCh---hHH
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE---GFI 175 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a~---G~l 175 (198)
+++|||+|+ |.+|+.+++.|.+.|++|.++..++........ -+.+..|+.|.+.+.+.++++|+|+...+ ..+
T Consensus 1 M~~Ililg~-g~~g~~~~~a~~~~G~~v~~~~~~~~~~~~~~~--~~~~~~~~~d~~~l~~~~~~~d~v~~~~e~~~~~~ 77 (380)
T 3ax6_A 1 MKKIGIIGG-GQLGKMMTLEAKKMGFYVIVLDPTPRSPAGQVA--DEQIVAGFFDSERIEDLVKGSDVTTYDLEHIDVQT 77 (380)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCTTGGGS--SEEEECCTTCHHHHHHHHHTCSEEEESCSCSCHHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhC--ceEEECCCCCHHHHHHHHhcCCEEEecccCCCHHH
Confidence 468999997 799999999999999999999865543212222 24677899999999999999999886521 113
Q ss_pred HHHHHhCCCC
Q 029118 176 SNAGSLKGVQ 185 (198)
Q Consensus 176 ldAA~~~GVk 185 (198)
++.+.+.|+.
T Consensus 78 ~~~l~~~gi~ 87 (380)
T 3ax6_A 78 LKKLYNEGYK 87 (380)
T ss_dssp HHHHHHTTCE
T ss_pred HHHHHHCCCe
Confidence 4444555653
|
| >1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8 | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00068 Score=52.60 Aligned_cols=84 Identities=10% Similarity=0.185 Sum_probs=55.7
Q ss_pred CCCeEEEEcCC---ChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc-Chh
Q 029118 98 ARDAVLVTDGD---SDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-SEG 173 (198)
Q Consensus 98 ~~~~ILVTGAT---GfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~-a~G 173 (198)
..++|.|.|+| |.+|+.+++.|++.|++|.. .|+... +..+ +.++ .++.++.+.+|.|+.+ ...
T Consensus 13 ~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~--vnp~~~-~i~G--~~~~-------~s~~el~~~vDlvii~vp~~ 80 (138)
T 1y81_A 13 EFRKIALVGASKNPAKYGNIILKDLLSKGFEVLP--VNPNYD-EIEG--LKCY-------RSVRELPKDVDVIVFVVPPK 80 (138)
T ss_dssp -CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEE--ECTTCS-EETT--EECB-------SSGGGSCTTCCEEEECSCHH
T ss_pred CCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEE--eCCCCC-eECC--eeec-------CCHHHhCCCCCEEEEEeCHH
Confidence 35579999998 89999999999999997444 455532 2222 3221 1333445678999877 221
Q ss_pred ---HHHHHHHhCCCCeEEEEccc
Q 029118 174 ---FISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 174 ---~lldAA~~~GVkRiV~vSS~ 193 (198)
.+++.|.+.|++.++..++.
T Consensus 81 ~v~~v~~~~~~~g~~~i~~~~~~ 103 (138)
T 1y81_A 81 VGLQVAKEAVEAGFKKLWFQPGA 103 (138)
T ss_dssp HHHHHHHHHHHTTCCEEEECTTS
T ss_pred HHHHHHHHHHHcCCCEEEEcCcc
Confidence 25666677899888777653
|
| >2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A* | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00061 Score=58.84 Aligned_cols=85 Identities=12% Similarity=0.101 Sum_probs=58.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc-ccccCCceEEEEccCCCHHHHHHhhc--CccEEEEcC--h
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-MESFGTYVESMAGDASNKKFLKTALR--GVRSIICPS--E 172 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a-~~~~g~~vevV~GDl~D~~sL~~AL~--GvDaVIh~a--~ 172 (198)
+..+|+|.|+||.+|+.+++.|++.|+++.+.+ +|.+. .+.++ +.+ +. +++++++ .+|+++.+. .
T Consensus 6 ~~~rVaViG~sG~~G~~~~~~l~~~g~~~V~~V-~p~~~g~~~~G--~~v----y~---sl~el~~~~~~D~viI~tP~~ 75 (288)
T 2nu8_A 6 KNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGV-TPGKGGTTHLG--LPV----FN---TVREAVAATGATASVIYVPAP 75 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEE-CTTCTTCEETT--EEE----ES---SHHHHHHHHCCCEEEECCCGG
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEe-CCCcccceeCC--eec----cC---CHHHHhhcCCCCEEEEecCHH
Confidence 356899999999999999999998899866555 55432 22222 332 22 3455565 899998772 2
Q ss_pred --hHHHHHHHhCCCCeEEEEcc
Q 029118 173 --GFISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 173 --G~lldAA~~~GVkRiV~vSS 192 (198)
.-+++.|.++|++-+|.++.
T Consensus 76 ~~~~~~~ea~~~Gi~~iVi~t~ 97 (288)
T 2nu8_A 76 FCKDSILEAIDAGIKLIITITE 97 (288)
T ss_dssp GHHHHHHHHHHTTCSEEEECCC
T ss_pred HHHHHHHHHHHCCCCEEEEECC
Confidence 22677778889988776664
|
| >2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=97.32 E-value=0.0001 Score=61.52 Aligned_cols=71 Identities=7% Similarity=-0.077 Sum_probs=48.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEE--------ccCCCHHHHHHhhcCccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMA--------GDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~--------GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+++|+|.|+ |.+|..++..|.++|++|.++.|++++.......++.+.. .+..+...+.++++++|.||.+
T Consensus 3 ~m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 81 (316)
T 2ew2_A 3 AMKIAIAGA-GAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIAL 81 (316)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEEC
T ss_pred CCeEEEECc-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEEE
Confidence 468999996 9999999999999999999999987654322111233221 1122333444456699999987
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00011 Score=64.87 Aligned_cols=70 Identities=17% Similarity=0.174 Sum_probs=53.6
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc---cCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~---~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
.+.++|+|+|| |-+|+.+++.|...|.+|.++.|++++.... .+..++.+ ..+.+.+.+.+.++|.||.+
T Consensus 165 l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~DvVI~~ 237 (361)
T 1pjc_A 165 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELL---YSNSAEIETAVAEADLLIGA 237 (361)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEE---ECCHHHHHHHHHTCSEEEEC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEee---eCCHHHHHHHHcCCCEEEEC
Confidence 34579999999 9999999999999999999999987654322 22223222 23566788888999999987
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00015 Score=62.97 Aligned_cols=90 Identities=16% Similarity=0.188 Sum_probs=58.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc--ccCCceEEEEccCCCHHH---HHHhh-cCccEEEEcC
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASNKKF---LKTAL-RGVRSIICPS 171 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~--~~g~~vevV~GDl~D~~s---L~~AL-~GvDaVIh~a 171 (198)
++++|||+||+|-||..++..+...|.+|.+++|++++... .++.. .+ .|..+.+. +.+.. .|+|.||.+.
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~-~~--~~~~~~~~~~~~~~~~~~g~Dvvid~~ 243 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAK-RG--INYRSEDFAAVIKAETGQGVDIILDMI 243 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCS-EE--EETTTSCHHHHHHHHHSSCEEEEEESC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCC-EE--EeCCchHHHHHHHHHhCCCceEEEECC
Confidence 56799999999999999999999999999999998765432 23321 22 24444332 22222 4799999883
Q ss_pred hh-H---HHHHHHhCCCCeEEEEcc
Q 029118 172 EG-F---ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 172 ~G-~---lldAA~~~GVkRiV~vSS 192 (198)
.+ . .+++++.. .++|.++.
T Consensus 244 g~~~~~~~~~~l~~~--G~iv~~g~ 266 (353)
T 4dup_A 244 GAAYFERNIASLAKD--GCLSIIAF 266 (353)
T ss_dssp CGGGHHHHHHTEEEE--EEEEECCC
T ss_pred CHHHHHHHHHHhccC--CEEEEEEe
Confidence 22 2 33333333 36776654
|
| >3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP} | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00012 Score=61.64 Aligned_cols=64 Identities=6% Similarity=0.057 Sum_probs=48.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+++|.|.|+||.+|+.+++.|..+|++|++..|++++.......++. ..+ ..++++++|.||.+
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~-----~~~---~~~~~~~aDvVi~a 74 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIP-----LTD---GDGWIDEADVVVLA 74 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTTCC-----CCC---SSGGGGTCSEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcCCC-----cCC---HHHHhcCCCEEEEc
Confidence 46899999999999999999999999999998887654322111222 122 34578899999987
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00048 Score=59.51 Aligned_cols=89 Identities=17% Similarity=0.184 Sum_probs=59.2
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc--ccCCceEEEEccCCCHH---HHHHhh--cCccEEEEcCh
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASNKK---FLKTAL--RGVRSIICPSE 172 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~--~~g~~vevV~GDl~D~~---sL~~AL--~GvDaVIh~a~ 172 (198)
+++||+||+|-||..++..+...|.+|.++++++++... .++. ..++ |..+.+ .+.+.. +|+|.||.+..
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga-~~~~--~~~~~~~~~~v~~~~~~~g~D~vid~~g 242 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGA-AHVL--NEKAPDFEATLREVMKAEQPRIFLDAVT 242 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTC-SEEE--ETTSTTHHHHHHHHHHHHCCCEEEESSC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC-CEEE--ECCcHHHHHHHHHHhcCCCCcEEEECCC
Confidence 789999999999999999998899999999988766432 2342 1233 344332 333333 48999998842
Q ss_pred hH----HHHHHHhCCCCeEEEEccc
Q 029118 173 GF----ISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 173 G~----lldAA~~~GVkRiV~vSS~ 193 (198)
+. .+++.+.. .++|.+++.
T Consensus 243 ~~~~~~~~~~l~~~--G~iv~~G~~ 265 (349)
T 3pi7_A 243 GPLASAIFNAMPKR--ARWIIYGRL 265 (349)
T ss_dssp HHHHHHHHHHSCTT--CEEEECCCS
T ss_pred ChhHHHHHhhhcCC--CEEEEEecc
Confidence 22 34444333 588887643
|
| >1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1 | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00087 Score=58.02 Aligned_cols=85 Identities=22% Similarity=0.237 Sum_probs=57.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc-ccccCCceEEEEccCCCHHHHHHhhc--CccEEEEcC--h
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-MESFGTYVESMAGDASNKKFLKTALR--GVRSIICPS--E 172 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a-~~~~g~~vevV~GDl~D~~sL~~AL~--GvDaVIh~a--~ 172 (198)
+.++|+|.|+||..|+.+++.|++.|+++.+.+ +|... .+..+ +.++ .++.++.+ .+|.+|.+. .
T Consensus 6 ~~~~VaVvGasG~~G~~~~~~l~~~g~~~v~~V-nP~~~g~~i~G--~~vy-------~sl~el~~~~~~Dv~Ii~vp~~ 75 (288)
T 1oi7_A 6 RETRVLVQGITGREGQFHTKQMLTYGTKIVAGV-TPGKGGMEVLG--VPVY-------DTVKEAVAHHEVDASIIFVPAP 75 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEE-CTTCTTCEETT--EEEE-------SSHHHHHHHSCCSEEEECCCHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHcCCeEEEEE-CCCCCCceECC--EEee-------CCHHHHhhcCCCCEEEEecCHH
Confidence 346899999999999999999999999966555 44331 12222 3322 13455555 889988762 1
Q ss_pred --hHHHHHHHhCCCCeEEEEcc
Q 029118 173 --GFISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 173 --G~lldAA~~~GVkRiV~vSS 192 (198)
.-+++.|.++|++.+|.+++
T Consensus 76 ~~~~~~~ea~~~Gi~~vVi~t~ 97 (288)
T 1oi7_A 76 AAADAALEAAHAGIPLIVLITE 97 (288)
T ss_dssp HHHHHHHHHHHTTCSEEEECCS
T ss_pred HHHHHHHHHHHCCCCEEEEECC
Confidence 12677778889987877664
|
| >1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00057 Score=53.10 Aligned_cols=83 Identities=19% Similarity=0.002 Sum_probs=55.3
Q ss_pred CCeEEEEcCC---ChHHHHHHHHHHHCCCcEEEEEeCCcc-cccccCCceEEEEccCCCHHHHHHhhcCccEEEEc-Chh
Q 029118 99 RDAVLVTDGD---SDIGQMVILSLIVKRTRIKALVKDKRN-AMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-SEG 173 (198)
Q Consensus 99 ~~~ILVTGAT---GfIG~~Vvr~Ll~~G~~VralvR~~~~-a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~-a~G 173 (198)
.++|+|.|+| |.+|..+++.|++.|++ +..++|.+ ..+..+ +.++ .++.++-+.+|.++.+ ...
T Consensus 13 p~~vaVvGas~~~g~~G~~~~~~l~~~G~~--v~~vnp~~~~~~i~G--~~~~-------~sl~el~~~vDlavi~vp~~ 81 (140)
T 1iuk_A 13 AKTIAVLGAHKDPSRPAHYVPRYLREQGYR--VLPVNPRFQGEELFG--EEAV-------ASLLDLKEPVDILDVFRPPS 81 (140)
T ss_dssp CCEEEEETCCSSTTSHHHHHHHHHHHTTCE--EEEECGGGTTSEETT--EECB-------SSGGGCCSCCSEEEECSCHH
T ss_pred CCEEEEECCCCCCCChHHHHHHHHHHCCCE--EEEeCCCcccCcCCC--EEec-------CCHHHCCCCCCEEEEEeCHH
Confidence 5589999999 89999999999999997 55567764 222222 2221 1233344578988876 221
Q ss_pred ---HHHHHHHhCCCCeEEEEcc
Q 029118 174 ---FISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 174 ---~lldAA~~~GVkRiV~vSS 192 (198)
.+++.|.+.|++.+++.++
T Consensus 82 ~~~~v~~~~~~~gi~~i~~~~g 103 (140)
T 1iuk_A 82 ALMDHLPEVLALRPGLVWLQSG 103 (140)
T ss_dssp HHTTTHHHHHHHCCSCEEECTT
T ss_pred HHHHHHHHHHHcCCCEEEEcCC
Confidence 1567777788888776543
|
| >2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00068 Score=60.02 Aligned_cols=88 Identities=10% Similarity=0.032 Sum_probs=54.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC-CcEEEEEeCC-cc---cccccCC---------ceEEEEccCCCHHHHHHhhcCc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDK-RN---AMESFGT---------YVESMAGDASNKKFLKTALRGV 164 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G-~~VralvR~~-~~---a~~~~g~---------~vevV~GDl~D~~sL~~AL~Gv 164 (198)
+.+|.|.||||.+|+.+++.|.++. .+|+++..+. .. .....+. ..++...|. |++. +.++
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~----~~~v 78 (350)
T 2ep5_A 4 KIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPIVST-NYED----HKDV 78 (350)
T ss_dssp CEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBEECS-SGGG----GTTC
T ss_pred CcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCCHHHhcCcccccccccCCceeEEeeC-CHHH----hcCC
Confidence 4579999999999999999887653 4788886221 11 1111110 011112333 3333 4799
Q ss_pred cEEEEcC-hhH---HHHHHHhCCCCeEEEEcc
Q 029118 165 RSIICPS-EGF---ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 165 DaVIh~a-~G~---lldAA~~~GVkRiV~vSS 192 (198)
|.||.+. .+. ++.++.++|++ +|-.|+
T Consensus 79 DvVf~atp~~~s~~~a~~~~~aG~~-VId~s~ 109 (350)
T 2ep5_A 79 DVVLSALPNELAESIELELVKNGKI-VVSNAS 109 (350)
T ss_dssp SEEEECCCHHHHHHHHHHHHHTTCE-EEECSS
T ss_pred CEEEECCChHHHHHHHHHHHHCCCE-EEECCc
Confidence 9999883 222 67778888976 666665
|
| >2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=97.23 E-value=0.0026 Score=55.18 Aligned_cols=85 Identities=12% Similarity=0.132 Sum_probs=58.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc-ccccCCceEEEEccCCCHHHHHHhhc--CccEEEEcC-hh
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-MESFGTYVESMAGDASNKKFLKTALR--GVRSIICPS-EG 173 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a-~~~~g~~vevV~GDl~D~~sL~~AL~--GvDaVIh~a-~G 173 (198)
++.+++|.|+||..|+.+++.|++.|+++.+.+ +|.+. .+..+ +.++ .+++++.+ .+|.+|.+. ..
T Consensus 12 ~~~~v~V~Gasg~~G~~~~~~l~~~g~~~V~~V-nP~~~g~~i~G--~~vy-------~sl~el~~~~~~Dv~ii~vp~~ 81 (294)
T 2yv1_A 12 ENTKAIVQGITGRQGSFHTKKMLECGTKIVGGV-TPGKGGQNVHG--VPVF-------DTVKEAVKETDANASVIFVPAP 81 (294)
T ss_dssp TTCCEEEETTTSHHHHHHHHHHHHTTCCEEEEE-CTTCTTCEETT--EEEE-------SSHHHHHHHHCCCEEEECCCHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHHhCCCeEEEEe-CCCCCCceECC--Eeee-------CCHHHHhhcCCCCEEEEccCHH
Confidence 566789999999999999999999999955445 55432 22222 3332 23455555 899998762 22
Q ss_pred ---HHHHHHHhCCCCeEEEEcc
Q 029118 174 ---FISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 174 ---~lldAA~~~GVkRiV~vSS 192 (198)
-+++.|.++|++.+|.+++
T Consensus 82 ~~~~~v~ea~~~Gi~~vVi~t~ 103 (294)
T 2yv1_A 82 FAKDAVFEAIDAGIELIVVITE 103 (294)
T ss_dssp HHHHHHHHHHHTTCSEEEECCS
T ss_pred HHHHHHHHHHHCCCCEEEEECC
Confidence 2677778889988777664
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=97.22 E-value=0.00015 Score=62.08 Aligned_cols=72 Identities=11% Similarity=0.154 Sum_probs=50.8
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc--ccCCceEEEEccCCCHH---HHHHhh--cCccEEEE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASNKK---FLKTAL--RGVRSIIC 169 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~--~~g~~vevV~GDl~D~~---sL~~AL--~GvDaVIh 169 (198)
.++++|||+||+|-+|..++..+...|.+|.+++|++++... .++.. .+ .|..+.+ .+.+.. +++|.||.
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~-~~--~~~~~~~~~~~~~~~~~~~g~Dvvid 215 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAW-ET--IDYSHEDVAKRVLELTDGKKCPVVYD 215 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCS-EE--EETTTSCHHHHHHHHTTTCCEEEEEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCC-EE--EeCCCccHHHHHHHHhCCCCceEEEE
Confidence 357899999999999999999998899999999988765432 23321 22 2444433 333333 37999998
Q ss_pred cC
Q 029118 170 PS 171 (198)
Q Consensus 170 ~a 171 (198)
+.
T Consensus 216 ~~ 217 (325)
T 3jyn_A 216 GV 217 (325)
T ss_dssp SS
T ss_pred CC
Confidence 83
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=97.21 E-value=2.3e-05 Score=59.68 Aligned_cols=64 Identities=6% Similarity=0.125 Sum_probs=49.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc---ccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~---~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
.++|+|.|+ |.+|+.+++.|...|++|.+..|+++++.. .++ +++.. . +.+.++++++|.||.+
T Consensus 21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~--~~~~~--~---~~~~~~~~~~Divi~a 87 (144)
T 3oj0_A 21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYE--YEYVL--I---NDIDSLIKNNDVIITA 87 (144)
T ss_dssp CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHT--CEEEE--C---SCHHHHHHTCSEEEEC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhC--CceEe--e---cCHHHHhcCCCEEEEe
Confidence 678999996 999999999999999999999998876532 223 23222 2 2456778999999987
|
| >4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A | Back alignment and structure |
|---|
Probab=97.21 E-value=0.00059 Score=61.37 Aligned_cols=72 Identities=10% Similarity=0.071 Sum_probs=57.8
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
-.++++|+|.|+ |.+|+.+++.+.+.|++|.++..++........ -+.+..|+.|++.+.+.++++|+|+.-
T Consensus 32 ~~~~~~IlIlG~-G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~~a--d~~~~~~~~d~~~l~~~a~~~D~V~~~ 103 (419)
T 4e4t_A 32 ILPGAWLGMVGG-GQLGRMFCFAAQSMGYRVAVLDPDPASPAGAVA--DRHLRAAYDDEAALAELAGLCEAVSTE 103 (419)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCTTCHHHHHS--SEEECCCTTCHHHHHHHHHHCSEEEEC
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCcCchhhhC--CEEEECCcCCHHHHHHHHhcCCEEEEc
Confidence 457789999985 799999999999999999999766543222222 256789999999999999999999853
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=97.21 E-value=0.00026 Score=60.92 Aligned_cols=91 Identities=18% Similarity=0.220 Sum_probs=58.8
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc--ccCCceEEEEccCCCHH---HHHHhh--cCccEEEE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASNKK---FLKTAL--RGVRSIIC 169 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~--~~g~~vevV~GDl~D~~---sL~~AL--~GvDaVIh 169 (198)
.++++|||+||+|-||..++..+...|.+|.+++|++++... .++.. .++ |..+.+ .+.+.. .|+|.||.
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~-~~~--~~~~~~~~~~~~~~~~~~g~Dvvid 219 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAA-YVI--DTSTAPLYETVMELTNGIGADAAID 219 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCS-EEE--ETTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCc-EEE--eCCcccHHHHHHHHhCCCCCcEEEE
Confidence 356799999999999999999888899999999998876432 23322 222 444433 333333 37999998
Q ss_pred cChh-H---HHHHHHhCCCCeEEEEcc
Q 029118 170 PSEG-F---ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 170 ~a~G-~---lldAA~~~GVkRiV~vSS 192 (198)
+..+ . .+++.+.. .++|.++.
T Consensus 220 ~~g~~~~~~~~~~l~~~--G~iv~~G~ 244 (340)
T 3gms_A 220 SIGGPDGNELAFSLRPN--GHFLTIGL 244 (340)
T ss_dssp SSCHHHHHHHHHTEEEE--EEEEECCC
T ss_pred CCCChhHHHHHHHhcCC--CEEEEEee
Confidence 8422 2 22222222 46777654
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00066 Score=58.45 Aligned_cols=90 Identities=14% Similarity=0.072 Sum_probs=58.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcccccccCCceEEEEccCCCHH---HHHHhh-cCccEEEEcCh
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKK---FLKTAL-RGVRSIICPSE 172 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~~~~g~~vevV~GDl~D~~---sL~~AL-~GvDaVIh~a~ 172 (198)
++++|||+|| |-+|..++..+...|. +|.+++|++++....... .+. ..|..+.+ .+.++. .|+|.||.+..
T Consensus 164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~-v~~~~~~~~~~~~~~~~~~g~D~vid~~g 240 (343)
T 2dq4_A 164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADR-LVNPLEEDLLEVVRRVTGSGVEVLLEFSG 240 (343)
T ss_dssp TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSE-EECTTTSCHHHHHHHHHSSCEEEEEECSC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHh-ccCcCccCHHHHHHHhcCCCCCEEEECCC
Confidence 6789999999 9999999998888999 999999887654322221 221 23444422 222221 37999998832
Q ss_pred --hH---HHHHHHhCCCCeEEEEcc
Q 029118 173 --GF---ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 173 --G~---lldAA~~~GVkRiV~vSS 192 (198)
.. .+++.+..| ++|.++.
T Consensus 241 ~~~~~~~~~~~l~~~G--~iv~~g~ 263 (343)
T 2dq4_A 241 NEAAIHQGLMALIPGG--EARILGI 263 (343)
T ss_dssp CHHHHHHHHHHEEEEE--EEEECCC
T ss_pred CHHHHHHHHHHHhcCC--EEEEEec
Confidence 22 444444444 7887764
|
| >2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A* | Back alignment and structure |
|---|
Probab=97.17 E-value=0.0011 Score=51.49 Aligned_cols=82 Identities=9% Similarity=0.025 Sum_probs=54.6
Q ss_pred CCeEEEEcCC---ChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc-Chh-
Q 029118 99 RDAVLVTDGD---SDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-SEG- 173 (198)
Q Consensus 99 ~~~ILVTGAT---GfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~-a~G- 173 (198)
.++|+|.||+ |.+|..+++.|++.|++| ...+|... +..+ +.+ .. ++.++.+.+|.++.+ ...
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v--~~Vnp~~~-~i~G--~~~-y~------sl~~l~~~vDlvvi~vp~~~ 89 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHGYDV--YPVNPKYE-EVLG--RKC-YP------SVLDIPDKIEVVDLFVKPKL 89 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEE--EEECTTCS-EETT--EEC-BS------SGGGCSSCCSEEEECSCHHH
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCCCEE--EEECCCCC-eECC--eec-cC------CHHHcCCCCCEEEEEeCHHH
Confidence 5689999999 899999999999999974 44466542 2222 222 11 223334578988877 222
Q ss_pred --HHHHHHHhCCCCeEEEEcc
Q 029118 174 --FISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 174 --~lldAA~~~GVkRiV~vSS 192 (198)
.+++.|.+.|++.+++.++
T Consensus 90 ~~~vv~~~~~~gi~~i~~~~g 110 (144)
T 2d59_A 90 TMEYVEQAIKKGAKVVWFQYN 110 (144)
T ss_dssp HHHHHHHHHHHTCSEEEECTT
T ss_pred HHHHHHHHHHcCCCEEEECCC
Confidence 2677777888988776543
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0006 Score=58.32 Aligned_cols=69 Identities=10% Similarity=0.036 Sum_probs=52.3
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+..+++|+|.|+ |.+|+.+++.|...|++|.+..|++++.......+++.+. ...+.++++++|.||.+
T Consensus 154 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~-----~~~l~~~l~~aDvVi~~ 222 (300)
T 2rir_A 154 TIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARITEMGLVPFH-----TDELKEHVKDIDICINT 222 (300)
T ss_dssp CSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCEEEE-----GGGHHHHSTTCSEEEEC
T ss_pred CCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCeEEc-----hhhHHHHhhCCCEEEEC
Confidence 566889999996 9999999999999999999999887553321111244332 34678889999999976
|
| >1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A* | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0045 Score=53.61 Aligned_cols=84 Identities=12% Similarity=0.062 Sum_probs=60.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc--CccEEEEcCh---
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSE--- 172 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~--GvDaVIh~a~--- 172 (198)
++++|||+|+ |.+|+.+++.+.+.|++|.++..++........ -+++..|+.|++.+.++++ ++|+|+...+
T Consensus 10 ~~~~ili~g~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~~--d~~~~~~~~d~~~l~~~~~~~~~d~v~~~~e~~~ 86 (391)
T 1kjq_A 10 AATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAMHVA--HRSHVINMLDGDALRRVVELEKPHYIVPEIEAIA 86 (391)
T ss_dssp TCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGGGGS--SEEEECCTTCHHHHHHHHHHHCCSEEEECSSCSC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEECCCCCchhhhc--cceEECCCCCHHHHHHHHHHcCCCEEEECCCcCC
Confidence 4679999987 789999999999999999999876644222221 2567789999999988885 8999986521
Q ss_pred hHHHHHHHhCCC
Q 029118 173 GFISNAGSLKGV 184 (198)
Q Consensus 173 G~lldAA~~~GV 184 (198)
-.+++.+.+.|+
T Consensus 87 ~~~~~~l~~~gi 98 (391)
T 1kjq_A 87 TDMLIQLEEEGL 98 (391)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHhCCC
Confidence 113444455565
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=97.14 E-value=0.00032 Score=60.59 Aligned_cols=90 Identities=14% Similarity=0.195 Sum_probs=59.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHC-CCcEEEEEeCCccccc--ccCCceEEEEccCCCHHH---HHHhh--cCccEEEE
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAME--SFGTYVESMAGDASNKKF---LKTAL--RGVRSIIC 169 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~-G~~VralvR~~~~a~~--~~g~~vevV~GDl~D~~s---L~~AL--~GvDaVIh 169 (198)
++++||||||+|-||..++..+... |++|.+++|++++... .++. +. ..|..+.+. +.+.. .++|.||.
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~--~~-~~~~~~~~~~~~~~~~~~~~~~d~vi~ 246 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGA--DY-VINASMQDPLAEIRRITESKGVDAVID 246 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTC--SE-EEETTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCC--CE-EecCCCccHHHHHHHHhcCCCceEEEE
Confidence 5679999999999999999999888 9999999988765322 2332 22 125555333 45544 37999998
Q ss_pred cChh--H---HHHHHHhCCCCeEEEEcc
Q 029118 170 PSEG--F---ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 170 ~a~G--~---lldAA~~~GVkRiV~vSS 192 (198)
+..+ . .+++.+..| ++|.++.
T Consensus 247 ~~g~~~~~~~~~~~l~~~G--~iv~~g~ 272 (347)
T 1jvb_A 247 LNNSEKTLSVYPKALAKQG--KYVMVGL 272 (347)
T ss_dssp SCCCHHHHTTGGGGEEEEE--EEEECCS
T ss_pred CCCCHHHHHHHHHHHhcCC--EEEEECC
Confidence 8422 2 233333333 7777654
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=97.13 E-value=0.00043 Score=59.87 Aligned_cols=73 Identities=22% Similarity=0.231 Sum_probs=51.0
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc--ccCCceEEEEccCCC-HHHHHHhhc--CccEEEEcC
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASN-KKFLKTALR--GVRSIICPS 171 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~--~~g~~vevV~GDl~D-~~sL~~AL~--GvDaVIh~a 171 (198)
.++++|||+||+|.||..++..+...|.+|.++++++++... .++. ..++.-+ .+ .+.+.++.. |+|.||.+.
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga-~~v~~~~-~~~~~~v~~~~~~~g~Dvvid~~ 235 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGA-DIVLPLE-EGWAKAVREATGGAGVDMVVDPI 235 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTC-SEEEESS-TTHHHHHHHHTTTSCEEEEEESC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCC-cEEecCc-hhHHHHHHHHhCCCCceEEEECC
Confidence 357799999999999999999999999999999998765432 2332 2233333 22 233344443 699999883
|
| >3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A* | Back alignment and structure |
|---|
Probab=97.12 E-value=0.0014 Score=58.44 Aligned_cols=69 Identities=12% Similarity=0.191 Sum_probs=55.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEE
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIIC 169 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh 169 (198)
+++|+|.|+ |.+|+.+++.+.+.|++|.++. ++.............+.+|+.|.+.+.+.++.+|+|+.
T Consensus 24 ~~~I~ilGg-G~lg~~l~~aa~~lG~~v~~~d-~~~~p~~~~ad~~~~~~~~~~d~~~l~~~a~~~d~i~~ 92 (403)
T 3k5i_A 24 SRKVGVLGG-GQLGRMLVESANRLNIQVNVLD-ADNSPAKQISAHDGHVTGSFKEREAVRQLAKTCDVVTA 92 (403)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCEEEEEE-STTCTTGGGCCSSCCEESCTTCHHHHHHHHTTCSEEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE-CCCCcHHHhccccceeecCCCCHHHHHHHHHhCCEEEE
Confidence 578999996 7999999999999999999999 65432222222235688999999999999999998864
|
| >2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.11 E-value=0.0012 Score=56.43 Aligned_cols=52 Identities=13% Similarity=0.220 Sum_probs=42.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
.++|.|.||.|.+|..+++.|.+.|++|.+..|+++. +..++++++|.||.+
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~--------------------~~~~~~~~aDvVila 72 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA--------------------VAESILANADVVIVS 72 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG--------------------GHHHHHTTCSEEEEC
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCccc--------------------CHHHHhcCCCEEEEe
Confidence 3579999999999999999999999999999876642 345567778888776
|
| >3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A | Back alignment and structure |
|---|
Probab=97.10 E-value=0.0018 Score=57.03 Aligned_cols=71 Identities=13% Similarity=0.100 Sum_probs=57.2
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEE
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIIC 169 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh 169 (198)
..++++|+|.|+ |.+|+.+++.+.+.|++|.++..++........ -+.+.+|+.|.+.+.+.++.+|+|..
T Consensus 9 ~~~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p~~~~a--d~~~~~~~~d~~~l~~~~~~~dvi~~ 79 (377)
T 3orq_A 9 LKFGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYVA--HEFIQAKYDDEKALNQLGQKCDVITY 79 (377)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTTGGGS--SEEEECCTTCHHHHHHHHHHCSEEEE
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChhhhhC--CEEEECCCCCHHHHHHHHHhCCccee
Confidence 346789999985 789999999999999999999876643222222 36788999999999999999998865
|
| >2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae} | Back alignment and structure |
|---|
Probab=97.08 E-value=0.00063 Score=53.07 Aligned_cols=83 Identities=11% Similarity=0.049 Sum_probs=53.9
Q ss_pred CCeEEEEcCC---ChHHHHHHHHHHHCCCcEEEEEeCCccc-ccccCCceEEEEccCCCHHHHHHhhcCccEEEEc--Ch
Q 029118 99 RDAVLVTDGD---SDIGQMVILSLIVKRTRIKALVKDKRNA-MESFGTYVESMAGDASNKKFLKTALRGVRSIICP--SE 172 (198)
Q Consensus 99 ~~~ILVTGAT---GfIG~~Vvr~Ll~~G~~VralvR~~~~a-~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~--a~ 172 (198)
.++|.|.|++ |.+|..+++.|++.|++|. ..|++.. .+..+ +.+ ..++. ++.+.+|.|+.+ ..
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~--~vnp~~~g~~i~G--~~~-~~sl~------el~~~~Dlvii~vp~~ 81 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQGYHVI--PVSPKVAGKTLLG--QQG-YATLA------DVPEKVDMVDVFRNSE 81 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHTCCEE--EECSSSTTSEETT--EEC-CSSTT------TCSSCCSEEECCSCST
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCCCEEE--EeCCcccccccCC--eec-cCCHH------HcCCCCCEEEEEeCHH
Confidence 4569999998 8999999999999999844 4466542 12222 222 12232 334578988876 21
Q ss_pred h--HHHHHHHhCCCCeEEEEcc
Q 029118 173 G--FISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 173 G--~lldAA~~~GVkRiV~vSS 192 (198)
. .+++.|.+.|++.++..++
T Consensus 82 ~v~~v~~~~~~~g~~~i~i~~~ 103 (145)
T 2duw_A 82 AAWGVAQEAIAIGAKTLWLQLG 103 (145)
T ss_dssp HHHHHHHHHHHHTCCEEECCTT
T ss_pred HHHHHHHHHHHcCCCEEEEcCC
Confidence 1 2556666688988776543
|
| >2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0016 Score=56.53 Aligned_cols=86 Identities=19% Similarity=0.181 Sum_probs=57.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc-ccccCCceEEEEccCCCHHHHHHhhc--C-ccEEEEc--
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-MESFGTYVESMAGDASNKKFLKTALR--G-VRSIICP-- 170 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a-~~~~g~~vevV~GDl~D~~sL~~AL~--G-vDaVIh~-- 170 (198)
.++.+++|.|+||..|+.+++.|++.|+++.+.+ +|.+. .+..+ +.++ .++.++.+ + +|.+|.+
T Consensus 11 ~~~~~vvV~Gasg~~G~~~~~~l~~~g~~~v~~V-nP~~~g~~i~G--~~vy-------~sl~el~~~~~~~DvaIi~vp 80 (297)
T 2yv2_A 11 DSETRVLVQGITGREGSFHAKAMLEYGTKVVAGV-TPGKGGSEVHG--VPVY-------DSVKEALAEHPEINTSIVFVP 80 (297)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEE-CTTCTTCEETT--EEEE-------SSHHHHHHHCTTCCEEEECCC
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHhCCCcEEEEe-CCCCCCceECC--Eeee-------CCHHHHhhcCCCCCEEEEecC
Confidence 3566788999999999999999999999855555 45432 22222 3322 23444554 5 8998876
Q ss_pred Chh--HHHHHHHhCCCCeEEEEcc
Q 029118 171 SEG--FISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 171 a~G--~lldAA~~~GVkRiV~vSS 192 (198)
... -+++.|.++|++.+|.+|+
T Consensus 81 ~~~~~~~v~ea~~~Gi~~vVi~t~ 104 (297)
T 2yv2_A 81 APFAPDAVYEAVDAGIRLVVVITE 104 (297)
T ss_dssp GGGHHHHHHHHHHTTCSEEEECCC
T ss_pred HHHHHHHHHHHHHCCCCEEEEECC
Confidence 222 2677788889998887664
|
| >2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* | Back alignment and structure |
|---|
Probab=97.04 E-value=0.00074 Score=58.58 Aligned_cols=89 Identities=12% Similarity=0.019 Sum_probs=58.0
Q ss_pred CeEEEEcCCChHHHHH-HHHH-HHCCCc-EEEEEeCCc---ccccccCCceEEEEccCCCHH--HHHHhhcCccEEEEcC
Q 029118 100 DAVLVTDGDSDIGQMV-ILSL-IVKRTR-IKALVKDKR---NAMESFGTYVESMAGDASNKK--FLKTALRGVRSIICPS 171 (198)
Q Consensus 100 ~~ILVTGATGfIG~~V-vr~L-l~~G~~-VralvR~~~---~a~~~~g~~vevV~GDl~D~~--sL~~AL~GvDaVIh~a 171 (198)
++|||+|| |-+|... +..+ ...|.+ |.+++++++ +.......+++.+ |..+.+ .+.++-.|+|.||.+.
T Consensus 174 ~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v--~~~~~~~~~i~~~~gg~Dvvid~~ 250 (357)
T 2b5w_A 174 SSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYV--DSRQTPVEDVPDVYEQMDFIYEAT 250 (357)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEE--ETTTSCGGGHHHHSCCEEEEEECS
T ss_pred CEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCccc--CCCccCHHHHHHhCCCCCEEEECC
Confidence 89999999 9999998 8777 678988 999999877 5432222235555 665422 2444312689999883
Q ss_pred --hhH---HHHHHHhCCCCeEEEEccc
Q 029118 172 --EGF---ISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 172 --~G~---lldAA~~~GVkRiV~vSS~ 193 (198)
..+ .+++++..| ++|.++..
T Consensus 251 g~~~~~~~~~~~l~~~G--~iv~~g~~ 275 (357)
T 2b5w_A 251 GFPKHAIQSVQALAPNG--VGALLGVP 275 (357)
T ss_dssp CCHHHHHHHHHHEEEEE--EEEECCCC
T ss_pred CChHHHHHHHHHHhcCC--EEEEEeCC
Confidence 222 344444444 78777653
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0018 Score=55.90 Aligned_cols=90 Identities=14% Similarity=0.098 Sum_probs=59.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc--cccCCceEEEEccCCC----HHHHHHhh-----cCcc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM--ESFGTYVESMAGDASN----KKFLKTAL-----RGVR 165 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~--~~~g~~vevV~GDl~D----~~sL~~AL-----~GvD 165 (198)
.++++|||+|| |-+|..++..+...|.+|.++++++++.. ..++.. .++ |..+ .+.+.+.. +++|
T Consensus 167 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~-~~~--~~~~~~~~~~~i~~~~~~~~g~g~D 242 (352)
T 1e3j_A 167 QLGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGAD-VTL--VVDPAKEEESSIIERIRSAIGDLPN 242 (352)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCS-EEE--ECCTTTSCHHHHHHHHHHHSSSCCS
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCC-EEE--cCcccccHHHHHHHHhccccCCCCC
Confidence 35789999997 99999999988889999999988876543 223422 222 3332 44555555 4799
Q ss_pred EEEEcC--hhH---HHHHHHhCCCCeEEEEcc
Q 029118 166 SIICPS--EGF---ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 166 aVIh~a--~G~---lldAA~~~GVkRiV~vSS 192 (198)
.||.+. ..+ .+++.+.. .|+|.++.
T Consensus 243 ~vid~~g~~~~~~~~~~~l~~~--G~iv~~G~ 272 (352)
T 1e3j_A 243 VTIDCSGNEKCITIGINITRTG--GTLMLVGM 272 (352)
T ss_dssp EEEECSCCHHHHHHHHHHSCTT--CEEEECSC
T ss_pred EEEECCCCHHHHHHHHHHHhcC--CEEEEEec
Confidence 999883 222 33443333 47887754
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0003 Score=60.81 Aligned_cols=69 Identities=16% Similarity=0.038 Sum_probs=51.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcccccc---cCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~~~---~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
...++++|+|+ |.+|+.++..|.+.|+ +|++..|+++++... ++.... ++.+.+.+.+++.++|.||++
T Consensus 139 l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~----~~~~~~~~~~~~~~aDivIn~ 211 (297)
T 2egg_A 139 LDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRS----AYFSLAEAETRLAEYDIIINT 211 (297)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSC----CEECHHHHHHTGGGCSEEEEC
T ss_pred CCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccC----ceeeHHHHHhhhccCCEEEEC
Confidence 45679999998 7899999999999998 899999987665322 221110 122335678888999999987
|
| >3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0042 Score=55.44 Aligned_cols=85 Identities=15% Similarity=0.169 Sum_probs=53.2
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCc---EEEEEeCCc--ccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC-hh
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTR---IKALVKDKR--NAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-EG 173 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~---VralvR~~~--~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a-~G 173 (198)
.+|.|.||||++|+.+++.|.++.++ ++.+.-..+ +... +.. .+...-++.+ +.++++|.||.+. .+
T Consensus 2 ~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~aG~~~~-~~~-~~~~~~~~~~-----~~~~~~Dvvf~a~~~~ 74 (344)
T 3tz6_A 2 LSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARSQGRKLA-FRG-QEIEVEDAET-----ADPSGLDIALFSAGSA 74 (344)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTSSCEEE-ETT-EEEEEEETTT-----SCCTTCSEEEECSCHH
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECcccCCCcee-ecC-CceEEEeCCH-----HHhccCCEEEECCChH
Confidence 57999999999999999988887554 555542211 1111 211 2333333332 3468999999883 33
Q ss_pred H---HHHHHHhCCCCeEEEEcc
Q 029118 174 F---ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 174 ~---lldAA~~~GVkRiV~vSS 192 (198)
. +...+.++|+ ++|=+|+
T Consensus 75 ~s~~~a~~~~~~G~-~vID~Sa 95 (344)
T 3tz6_A 75 MSKVQAPRFAAAGV-TVIDNSS 95 (344)
T ss_dssp HHHHHHHHHHHTTC-EEEECSS
T ss_pred HHHHHHHHHHhCCC-EEEECCC
Confidence 2 5666677887 5666666
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=97.00 E-value=0.001 Score=56.76 Aligned_cols=69 Identities=14% Similarity=0.058 Sum_probs=52.0
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+..+++|+|.| .|.+|+.+++.|...|.+|.+..|++++.......+++++ +.+.+.++++++|.|+.+
T Consensus 152 ~l~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-----~~~~l~~~l~~aDvVi~~ 220 (293)
T 3d4o_A 152 TIHGANVAVLG-LGRVGMSVARKFAALGAKVKVGARESDLLARIAEMGMEPF-----HISKAAQELRDVDVCINT 220 (293)
T ss_dssp CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTSEEE-----EGGGHHHHTTTCSEEEEC
T ss_pred CCCCCEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeec-----ChhhHHHHhcCCCEEEEC
Confidence 46688999999 5999999999999999999999988755322111224443 234678889999999976
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0003 Score=62.66 Aligned_cols=71 Identities=13% Similarity=0.025 Sum_probs=55.4
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc---cccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~---~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
..++++|+|+|+ |.||+.+++.|...|.+|.+..|++++.. ..++..+. .+..+...+.++++++|.||.+
T Consensus 165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~---~~~~~~~~l~~~l~~aDvVi~~ 238 (377)
T 2vhw_A 165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIH---TRYSSAYELEGAVKRADLVIGA 238 (377)
T ss_dssp TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSE---EEECCHHHHHHHHHHCSEEEEC
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeE---eccCCHHHHHHHHcCCCEEEEC
Confidence 456789999998 99999999999999999999999876532 22343322 2344567888899999999986
|
| >3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=96.97 E-value=0.00069 Score=57.03 Aligned_cols=63 Identities=8% Similarity=-0.036 Sum_probs=47.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
++|.|.| .|.+|+.+++.|.++||+|++..|++++.......++.. ..++.++++++|.||.+
T Consensus 2 ~~i~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~-------~~~~~~~~~~aDvvi~~ 64 (287)
T 3pef_A 2 QKFGFIG-LGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAER-------AATPCEVVESCPVTFAM 64 (287)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEE-------CSSHHHHHHHCSEEEEC
T ss_pred CEEEEEe-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCee-------cCCHHHHHhcCCEEEEE
Confidence 5799998 599999999999999999999999887654332222322 12455667778888876
|
| >2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A* | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0059 Score=54.04 Aligned_cols=69 Identities=14% Similarity=0.218 Sum_probs=54.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc--CccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~--GvDaVIh~ 170 (198)
+++|||+|+ |.+|+.+++.+.+.|++|.++..++........ -+.+..|+.|.+.+.++++ ++|+|+..
T Consensus 19 ~~~ili~g~-g~~g~~~~~a~~~~G~~v~~v~~~~~~~~~~~a--d~~~~~~~~d~~~l~~~~~~~~~d~V~~~ 89 (433)
T 2dwc_A 19 AQKILLLGS-GELGKEIAIEAQRLGVEVVAVDRYANAPAMQVA--HRSYVGNMMDKDFLWSVVEREKPDAIIPE 89 (433)
T ss_dssp CCEEEEESC-SHHHHHHHHHHHHTTCEEEEEESSTTCHHHHHS--SEEEESCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChhhhhc--ceEEECCCCCHHHHHHHHHHcCCCEEEEC
Confidence 568999987 789999999999999999999876644221111 2567789999999998885 89999875
|
| >1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0016 Score=57.95 Aligned_cols=72 Identities=15% Similarity=0.030 Sum_probs=52.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc--ccCCceEEEEccCC----------------------
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDAS---------------------- 152 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~--~~g~~vevV~GDl~---------------------- 152 (198)
.++++|+|+|+ |-+|..+++.+...|.+|.+..|++.+... .++ .+++..|..
T Consensus 170 l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~G--a~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~ 246 (384)
T 1l7d_A 170 VPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESLG--GKFITVDDEAMKTAETAGGYAKEMGEEFRKK 246 (384)
T ss_dssp ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTT--CEECCC-----------------------CC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcC--CeEEeecccccccccccccchhhcCHHHHhh
Confidence 46789999996 999999999999999999999888765422 233 333311221
Q ss_pred CHHHHHHhhcCccEEEEcC
Q 029118 153 NKKFLKTALRGVRSIICPS 171 (198)
Q Consensus 153 D~~sL~~AL~GvDaVIh~a 171 (198)
+++.+.+.++++|.||++.
T Consensus 247 ~~~~l~~~~~~aDvVi~~~ 265 (384)
T 1l7d_A 247 QAEAVLKELVKTDIAITTA 265 (384)
T ss_dssp HHHHHHHHHTTCSEEEECC
T ss_pred hHHHHHHHhCCCCEEEECC
Confidence 2344888899999999873
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0011 Score=58.13 Aligned_cols=90 Identities=13% Similarity=0.138 Sum_probs=61.0
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc--ccCCceEEEEccCCCHHHHHHhhcCccEEEEcCh--
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASNKKFLKTALRGVRSIICPSE-- 172 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~--~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a~-- 172 (198)
.++++|||+|| |-+|..++..+...|.+|.++++++++... .++ ++. ..|..+.+.+++...++|.||.+..
T Consensus 193 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lG--a~~-vi~~~~~~~~~~~~~g~Dvvid~~g~~ 268 (369)
T 1uuf_A 193 GPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALG--ADE-VVNSRNADEMAAHLKSFDFILNTVAAP 268 (369)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHT--CSE-EEETTCHHHHHTTTTCEEEEEECCSSC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcC--CcE-EeccccHHHHHHhhcCCCEEEECCCCH
Confidence 35789999998 889999999888899999999988766432 234 222 2356676666666679999998731
Q ss_pred hH---HHHHHHhCCCCeEEEEcc
Q 029118 173 GF---ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 173 G~---lldAA~~~GVkRiV~vSS 192 (198)
.. .+++++..| ++|.++.
T Consensus 269 ~~~~~~~~~l~~~G--~iv~~G~ 289 (369)
T 1uuf_A 269 HNLDDFTTLLKRDG--TMTLVGA 289 (369)
T ss_dssp CCHHHHHTTEEEEE--EEEECCC
T ss_pred HHHHHHHHHhccCC--EEEEecc
Confidence 11 333333333 6776654
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=96.93 E-value=0.00048 Score=59.97 Aligned_cols=91 Identities=18% Similarity=0.045 Sum_probs=57.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCC---cccccccCCceEEEEccCCC--HHHHHHhhcCccEEEEcCh-
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK---RNAMESFGTYVESMAGDASN--KKFLKTALRGVRSIICPSE- 172 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~---~~a~~~~g~~vevV~GDl~D--~~sL~~AL~GvDaVIh~a~- 172 (198)
+++|||+|| |.+|..++..+...|.+|.+++|++ ++.......+++.+ | .+ .+.+.+.-.++|.||.+..
T Consensus 181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v--~-~~~~~~~~~~~~~~~d~vid~~g~ 256 (366)
T 2cdc_A 181 CRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYY--N-SSNGYDKLKDSVGKFDVIIDATGA 256 (366)
T ss_dssp TCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEE--E-CTTCSHHHHHHHCCEEEEEECCCC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCcee--c-hHHHHHHHHHhCCCCCEEEECCCC
Confidence 789999999 9999999999988999999999987 55422111124544 5 44 1233321268999998832
Q ss_pred -hHH-HHHHHhC-CCCeEEEEccc
Q 029118 173 -GFI-SNAGSLK-GVQHVILLSQG 193 (198)
Q Consensus 173 -G~l-ldAA~~~-GVkRiV~vSS~ 193 (198)
..+ -.+.... .-.++|.++..
T Consensus 257 ~~~~~~~~~~~l~~~G~iv~~g~~ 280 (366)
T 2cdc_A 257 DVNILGNVIPLLGRNGVLGLFGFS 280 (366)
T ss_dssp CTHHHHHHGGGEEEEEEEEECSCC
T ss_pred hHHHHHHHHHHHhcCCEEEEEecC
Confidence 223 2222211 11478877653
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0013 Score=57.08 Aligned_cols=89 Identities=10% Similarity=0.068 Sum_probs=61.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc---ccCCceEEEEccCCCHHHHHHhhcCccEEEEcC--h
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALRGVRSIICPS--E 172 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~---~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a--~ 172 (198)
++++|||+|+ |-+|...+..+...|.+|.++++++++... .++ .+.+ .|..+.+.+.++..|+|.||.+. .
T Consensus 180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lG--a~~v-i~~~~~~~~~~~~~g~D~vid~~g~~ 255 (357)
T 2cf5_A 180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLG--ADDY-VIGSDQAKMSELADSLDYVIDTVPVH 255 (357)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSC--CSCE-EETTCHHHHHHSTTTEEEEEECCCSC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcC--Ccee-eccccHHHHHHhcCCCCEEEECCCCh
Confidence 6789999996 999999998888889999999998766432 344 2221 35567777777778999999873 1
Q ss_pred hH---HHHHHHhCCCCeEEEEcc
Q 029118 173 GF---ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 173 G~---lldAA~~~GVkRiV~vSS 192 (198)
.+ .+++.+.. .|+|.++.
T Consensus 256 ~~~~~~~~~l~~~--G~iv~~G~ 276 (357)
T 2cf5_A 256 HALEPYLSLLKLD--GKLILMGV 276 (357)
T ss_dssp CCSHHHHTTEEEE--EEEEECSC
T ss_pred HHHHHHHHHhccC--CEEEEeCC
Confidence 11 33333333 36776654
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0018 Score=56.57 Aligned_cols=69 Identities=13% Similarity=0.209 Sum_probs=47.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc--cccCCceEEEEccCCCHHHHHHh--hcCccEEEEc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM--ESFGTYVESMAGDASNKKFLKTA--LRGVRSIICP 170 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~--~~~g~~vevV~GDl~D~~sL~~A--L~GvDaVIh~ 170 (198)
++++|||+||+|-||..++..+...|.+|.+.++ +++.. ..++ .+.+ .|..+.+..++. ..|+|.||.+
T Consensus 183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~~~~~lG--a~~v-~~~~~~~~~~~~~~~~g~D~vid~ 255 (375)
T 2vn8_A 183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDASELVRKLG--ADDV-IDYKSGSVEEQLKSLKPFDFILDN 255 (375)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHHHHHHTT--CSEE-EETTSSCHHHHHHTSCCBSEEEES
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHHHHHHcC--CCEE-EECCchHHHHHHhhcCCCCEEEEC
Confidence 4679999999999999999999889999998884 33322 2233 2222 244443332222 2589999988
|
| >3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=96.92 E-value=0.00086 Score=57.49 Aligned_cols=66 Identities=8% Similarity=-0.005 Sum_probs=48.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
..+++|.|.| .|.+|..+++.|.++||+|++..|++++.......++++ ..++.++++++|.||.+
T Consensus 19 ~~m~~I~iIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~-------~~~~~~~~~~aDvvi~~ 84 (310)
T 3doj_A 19 SHMMEVGFLG-LGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASV-------CESPAEVIKKCKYTIAM 84 (310)
T ss_dssp CCSCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEE-------CSSHHHHHHHCSEEEEC
T ss_pred ccCCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeE-------cCCHHHHHHhCCEEEEE
Confidence 3467899997 699999999999999999999999887654332222322 12445666778888766
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0033 Score=56.06 Aligned_cols=95 Identities=12% Similarity=0.078 Sum_probs=60.1
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc--ccCCceEEEEc--cCCC----------------HHH
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAG--DASN----------------KKF 156 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~--~~g~~vevV~G--Dl~D----------------~~s 156 (198)
.++++|||+||+|-||..++..+...|.+|.++++++++... .++...-+-.. |+.+ .+.
T Consensus 219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (447)
T 4a0s_A 219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKL 298 (447)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHHHH
Confidence 356799999999999999999999999999999987765432 23422111111 2211 233
Q ss_pred HHHhh-cCccEEEEcChhH----HHHHHHhCCCCeEEEEccc
Q 029118 157 LKTAL-RGVRSIICPSEGF----ISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 157 L~~AL-~GvDaVIh~a~G~----lldAA~~~GVkRiV~vSS~ 193 (198)
+.+.. .|+|.||.+..+. .+++.+.. .++|.+++.
T Consensus 299 v~~~~g~g~Dvvid~~G~~~~~~~~~~l~~~--G~iv~~G~~ 338 (447)
T 4a0s_A 299 VVEKAGREPDIVFEHTGRVTFGLSVIVARRG--GTVVTCGSS 338 (447)
T ss_dssp HHHHHSSCCSEEEECSCHHHHHHHHHHSCTT--CEEEESCCT
T ss_pred HHHHhCCCceEEEECCCchHHHHHHHHHhcC--CEEEEEecC
Confidence 44443 4799999884222 23333333 588888754
|
| >1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.91 E-value=0.00031 Score=59.57 Aligned_cols=70 Identities=10% Similarity=0.068 Sum_probs=48.2
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEe--CCcccccccCCc------eEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVK--DKRNAMESFGTY------VESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR--~~~~a~~~~g~~------vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
++|.|.|+ |.+|..++..|.++||+|.++.| ++++.......+ +++......+++++.++++++|.||.+
T Consensus 1 m~I~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~vi~~ 78 (335)
T 1txg_A 1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLG 78 (335)
T ss_dssp CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEEC
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEEEEc
Confidence 47999986 99999999999999999999999 765443221111 110000122333566788999999988
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A | Back alignment and structure |
|---|
Probab=96.90 E-value=0.00068 Score=58.88 Aligned_cols=70 Identities=11% Similarity=0.100 Sum_probs=49.8
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc--ccCCceEEEEccCCCH-HHHHHhhcCccEEEEc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASNK-KFLKTALRGVRSIICP 170 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~--~~g~~vevV~GDl~D~-~sL~~AL~GvDaVIh~ 170 (198)
.++++|||+|| |-+|..++..+...|.+|.++++++++... .++ .+.+ .|..+. +..++...++|.||.+
T Consensus 178 ~~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lG--a~~v-~~~~~~~~~~~~~~~~~D~vid~ 250 (360)
T 1piw_A 178 GPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKMG--ADHY-IATLEEGDWGEKYFDTFDLIVVC 250 (360)
T ss_dssp STTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHT--CSEE-EEGGGTSCHHHHSCSCEEEEEEC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcC--CCEE-EcCcCchHHHHHhhcCCCEEEEC
Confidence 35789999999 999999998888889999999988766432 234 2222 244443 3334334689999987
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=96.88 E-value=0.004 Score=52.32 Aligned_cols=93 Identities=9% Similarity=0.002 Sum_probs=64.5
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCC-------------------ccccc------ccCCc--eEEE
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK-------------------RNAME------SFGTY--VESM 147 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~-------------------~~a~~------~~g~~--vevV 147 (198)
.....+|+|.|+ |.+|+++++.|...|. +++++.++. .++.. ...+. ++.+
T Consensus 28 ~l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~ 106 (249)
T 1jw9_B 28 ALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPV 106 (249)
T ss_dssp HHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred HHhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEE
Confidence 455678999996 7899999999999997 788888776 22211 11233 4455
Q ss_pred EccCCCHHHHHHhhcCccEEEEcC--hh---HHHHHHHhCCCCeEEEEc
Q 029118 148 AGDASNKKFLKTALRGVRSIICPS--EG---FISNAGSLKGVQHVILLS 191 (198)
Q Consensus 148 ~GDl~D~~sL~~AL~GvDaVIh~a--~G---~lldAA~~~GVkRiV~vS 191 (198)
..+++ .+.+.+.++++|.||.+. .. .+.++|++.++. +|+.+
T Consensus 107 ~~~~~-~~~~~~~~~~~DvVi~~~d~~~~~~~l~~~~~~~~~p-~i~~~ 153 (249)
T 1jw9_B 107 NALLD-DAELAALIAEHDLVLDCTDNVAVRNQLNAGCFAAKVP-LVSGA 153 (249)
T ss_dssp CSCCC-HHHHHHHHHTSSEEEECCSSHHHHHHHHHHHHHHTCC-EEEEE
T ss_pred eccCC-HhHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHHcCCC-EEEee
Confidence 55665 456778899999999883 21 267778888865 44443
|
| >4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0013 Score=56.80 Aligned_cols=65 Identities=8% Similarity=-0.002 Sum_probs=49.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
..++|.|.|+ |.+|+.+++.|.++|++|++..|++++.......++++. .++.++++++|.||.+
T Consensus 30 ~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~-------~~~~e~~~~aDvVi~~ 94 (320)
T 4dll_A 30 YARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIH-------EQARAAARDADIVVSM 94 (320)
T ss_dssp CCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEE-------SSHHHHHTTCSEEEEC
T ss_pred CCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEee-------CCHHHHHhcCCEEEEE
Confidence 3568999965 999999999999999999999998876544333333321 2456778888988876
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=96.87 E-value=0.00021 Score=60.50 Aligned_cols=68 Identities=16% Similarity=0.094 Sum_probs=46.0
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc---cCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~---~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
...++++|+|+ |.+|+.++..|.+.|++|.+..|+++++... ++....+...|+ +.+.+ .++|.||++
T Consensus 117 l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~---~~~~~--~~~DivVn~ 187 (271)
T 1nyt_A 117 RPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSM---DELEG--HEFDLIINA 187 (271)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCS---GGGTT--CCCSEEEEC
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecH---HHhcc--CCCCEEEEC
Confidence 45679999998 7899999999999999999999987654321 221001222232 22222 578888876
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0011 Score=57.20 Aligned_cols=67 Identities=9% Similarity=0.004 Sum_probs=51.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
..+++++|+|+ |.+|+.++..|.+.|. +|.+..|+++++..... .+..+ ..+.+.++++++|.||++
T Consensus 115 l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~-~~~~~-----~~~~~~~~~~~aDiVIna 182 (277)
T 3don_A 115 IEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWSL-NINKI-----NLSHAESHLDEFDIIINT 182 (277)
T ss_dssp GGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCS-CCEEE-----CHHHHHHTGGGCSEEEEC
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH-hcccc-----cHhhHHHHhcCCCEEEEC
Confidence 45678999997 8999999999999998 89999999877654322 23322 245677778889999876
|
| >3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A* | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0083 Score=52.51 Aligned_cols=70 Identities=10% Similarity=0.088 Sum_probs=55.6
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIIC 169 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh 169 (198)
.++++|+|.| .|.+|+++++.+.+.|++|.++..++........ -+.+..++.|.+.+.+.++.+|+|..
T Consensus 12 ~~~k~IlIlG-~G~~g~~la~aa~~~G~~vi~~d~~~~~~~~~~a--d~~~~~~~~d~~~l~~~~~~~dvI~~ 81 (389)
T 3q2o_A 12 LPGKTIGIIG-GGQLGRMMALAAKEMGYKIAVLDPTKNSPCAQVA--DIEIVASYDDLKAIQHLAEISDVVTY 81 (389)
T ss_dssp CTTSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSTTCTTTTTC--SEEEECCTTCHHHHHHHHHTCSEEEE
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEeCCCCCchHHhC--CceEecCcCCHHHHHHHHHhCCEeee
Confidence 4678999997 5679999999999999999999876543221111 25677899999999999999998854
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=96.84 E-value=0.00089 Score=57.76 Aligned_cols=67 Identities=13% Similarity=0.193 Sum_probs=48.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
.++++|||+|| |-+|...+..+...|.+|.++++++++.......+.+.+. .+++.+.+ ++|.||.+
T Consensus 175 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~---~~~~~~~~---~~D~vid~ 241 (348)
T 3two_A 175 TKGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFY---TDPKQCKE---ELDFIIST 241 (348)
T ss_dssp CTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEE---SSGGGCCS---CEEEEEEC
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeec---CCHHHHhc---CCCEEEEC
Confidence 46789999998 9999999998888999999999888765322222233333 45544433 99999987
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0014 Score=56.65 Aligned_cols=90 Identities=14% Similarity=0.209 Sum_probs=56.8
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc--cccCCceEEEEccCCC-HHHHHHhh--cCccEEEEcC
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM--ESFGTYVESMAGDASN-KKFLKTAL--RGVRSIICPS 171 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~--~~~g~~vevV~GDl~D-~~sL~~AL--~GvDaVIh~a 171 (198)
.++++|||+||+|-||..++..+...|.+|.++ +++++.. ..++ ++.+. +-.| .+.+.+.. +|+|.||.+.
T Consensus 149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~lG--a~~i~-~~~~~~~~~~~~~~~~g~D~vid~~ 224 (343)
T 3gaz_A 149 QDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDLG--ATPID-ASREPEDYAAEHTAGQGFDLVYDTL 224 (343)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHHT--SEEEE-TTSCHHHHHHHHHTTSCEEEEEESS
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHcC--CCEec-cCCCHHHHHHHHhcCCCceEEEECC
Confidence 356799999999999999999999999999998 6665532 2234 33333 3223 22333333 3799999883
Q ss_pred hhH----HHHHHHhCCCCeEEEEcc
Q 029118 172 EGF----ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 172 ~G~----lldAA~~~GVkRiV~vSS 192 (198)
.+. .+++++.. .++|.+..
T Consensus 225 g~~~~~~~~~~l~~~--G~iv~~g~ 247 (343)
T 3gaz_A 225 GGPVLDASFSAVKRF--GHVVSCLG 247 (343)
T ss_dssp CTHHHHHHHHHEEEE--EEEEESCC
T ss_pred CcHHHHHHHHHHhcC--CeEEEEcc
Confidence 222 33333332 46666543
|
| >3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0005 Score=57.90 Aligned_cols=64 Identities=6% Similarity=-0.074 Sum_probs=46.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+++|.|.| .|.+|..+++.|.++||+|++..|++++.......++++ . .++.++++++|.||.+
T Consensus 1 M~~I~iiG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~----~---~~~~~~~~~advvi~~ 64 (287)
T 3pdu_A 1 MTTYGFLG-LGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQ----A---SSPAEVCAACDITIAM 64 (287)
T ss_dssp CCCEEEEC-CSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHHTCEE----C---SCHHHHHHHCSEEEEC
T ss_pred CCeEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCee----c---CCHHHHHHcCCEEEEE
Confidence 35799997 799999999999999999999999987654332112222 1 2345566777888766
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=96.82 E-value=0.00067 Score=57.89 Aligned_cols=72 Identities=21% Similarity=0.319 Sum_probs=53.0
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc-ccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-MESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a-~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a 171 (198)
.++++|||+||+|-+|...+..+...|.+|.+.+++.+.. ...++ ++. ..|..+.+.+.+.++|+|.||.+.
T Consensus 151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~~~~~~~~lG--a~~-~i~~~~~~~~~~~~~g~D~v~d~~ 223 (321)
T 3tqh_A 151 KQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKRNHAFLKALG--AEQ-CINYHEEDFLLAISTPVDAVIDLV 223 (321)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHT--CSE-EEETTTSCHHHHCCSCEEEEEESS
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccchHHHHHHcC--CCE-EEeCCCcchhhhhccCCCEEEECC
Confidence 4678999999999999999999999999999988543311 12234 222 235566555778889999999883
|
| >3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0012 Score=57.44 Aligned_cols=91 Identities=11% Similarity=0.099 Sum_probs=58.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc--cccCCceEEEEccCCC-HHHHHHhhc--CccEEEEcCh
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM--ESFGTYVESMAGDASN-KKFLKTALR--GVRSIICPSE 172 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~--~~~g~~vevV~GDl~D-~~sL~~AL~--GvDaVIh~a~ 172 (198)
++++|||+| +|-+|...+..+...|.+|.++++++++.. ..++. ..++.-+-.| .+.+.+... |+|.||.+..
T Consensus 189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa-~~vi~~~~~~~~~~v~~~~~g~g~D~vid~~g 266 (363)
T 3uog_A 189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGA-DHGINRLEEDWVERVYALTGDRGADHILEIAG 266 (363)
T ss_dssp TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTC-SEEEETTTSCHHHHHHHHHTTCCEEEEEEETT
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCC-CEEEcCCcccHHHHHHHHhCCCCceEEEECCC
Confidence 567999999 899999999999889999999998876543 22342 2233211122 233444443 7999998732
Q ss_pred h----HHHHHHHhCCCCeEEEEcc
Q 029118 173 G----FISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 173 G----~lldAA~~~GVkRiV~vSS 192 (198)
+ ..+++.+..| ++|.++.
T Consensus 267 ~~~~~~~~~~l~~~G--~iv~~G~ 288 (363)
T 3uog_A 267 GAGLGQSLKAVAPDG--RISVIGV 288 (363)
T ss_dssp SSCHHHHHHHEEEEE--EEEEECC
T ss_pred hHHHHHHHHHhhcCC--EEEEEec
Confidence 2 2444444443 7777764
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0011 Score=57.16 Aligned_cols=71 Identities=13% Similarity=0.212 Sum_probs=52.2
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcccccc---cC---CceEEEEccCCCHHHHHHhhcCccEEE
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMES---FG---TYVESMAGDASNKKFLKTALRGVRSII 168 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~~~---~g---~~vevV~GDl~D~~sL~~AL~GvDaVI 168 (198)
+..++++||+|| |.+|+.++..|.+.|. +|.+..|+++++... +. +.+++...++ +.+.++++++|.||
T Consensus 124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~---~~l~~~l~~~DiVI 199 (283)
T 3jyo_A 124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDA---RGIEDVIAAADGVV 199 (283)
T ss_dssp TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECS---TTHHHHHHHSSEEE
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCH---HHHHHHHhcCCEEE
Confidence 355789999998 8999999999999998 699999988765422 11 2234444444 34567788899999
Q ss_pred Ec
Q 029118 169 CP 170 (198)
Q Consensus 169 h~ 170 (198)
++
T Consensus 200 na 201 (283)
T 3jyo_A 200 NA 201 (283)
T ss_dssp EC
T ss_pred EC
Confidence 76
|
| >3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0011 Score=60.28 Aligned_cols=72 Identities=10% Similarity=0.001 Sum_probs=54.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccC------------------CCHHHHHH
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDA------------------SNKKFLKT 159 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl------------------~D~~sL~~ 159 (198)
+..+|+|.|+ |-+|..+++.|...|.+|.++.|++++.......+.+++..++ .+.+.+.+
T Consensus 183 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e 261 (381)
T 3p2y_A 183 KPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALED 261 (381)
T ss_dssp CCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHH
T ss_pred CCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHH
Confidence 6779999998 9999999999999999999999988754322212344443221 13567889
Q ss_pred hhcCccEEEEc
Q 029118 160 ALRGVRSIICP 170 (198)
Q Consensus 160 AL~GvDaVIh~ 170 (198)
+++++|.||.+
T Consensus 262 ~l~~aDIVI~t 272 (381)
T 3p2y_A 262 AITKFDIVITT 272 (381)
T ss_dssp HHTTCSEEEEC
T ss_pred HHhcCCEEEEC
Confidence 99999999975
|
| >2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A* | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0081 Score=52.43 Aligned_cols=84 Identities=11% Similarity=0.093 Sum_probs=57.1
Q ss_pred CCeEEEE-cCCChHHHHHHHHHHHCCCcEEEEEeCCccc-ccccCCceEEEEccCCCHHHHHHhhc--CccEEEEcC-h-
Q 029118 99 RDAVLVT-DGDSDIGQMVILSLIVKRTRIKALVKDKRNA-MESFGTYVESMAGDASNKKFLKTALR--GVRSIICPS-E- 172 (198)
Q Consensus 99 ~~~ILVT-GATGfIG~~Vvr~Ll~~G~~VralvR~~~~a-~~~~g~~vevV~GDl~D~~sL~~AL~--GvDaVIh~a-~- 172 (198)
.++++|. |+||..|+.+++.|++.|+++...+ +|.+. .+..+ +.++ .++.++.+ .+|.++.+. .
T Consensus 13 ~~siaVV~Gasg~~G~~~~~~l~~~G~~~v~~V-nP~~~g~~i~G--~~vy-------~sl~el~~~~~vD~avI~vP~~ 82 (305)
T 2fp4_A 13 KNTKVICQGFTGKQGTFHSQQALEYGTNLVGGT-TPGKGGKTHLG--LPVF-------NTVKEAKEQTGATASVIYVPPP 82 (305)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEE-CTTCTTCEETT--EEEE-------SSHHHHHHHHCCCEEEECCCHH
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHCCCcEEEEe-CCCcCcceECC--eeee-------chHHHhhhcCCCCEEEEecCHH
Confidence 3455555 9999999999999999999965555 55432 22223 4433 13455555 899998772 2
Q ss_pred --hHHHHHHHhCCCCeEEEEcc
Q 029118 173 --GFISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 173 --G~lldAA~~~GVkRiV~vSS 192 (198)
.-+++.|.++|++.+|.++.
T Consensus 83 ~~~~~~~e~i~~Gi~~iv~~t~ 104 (305)
T 2fp4_A 83 FAAAAINEAIDAEVPLVVCITE 104 (305)
T ss_dssp HHHHHHHHHHHTTCSEEEECCC
T ss_pred HHHHHHHHHHHCCCCEEEEECC
Confidence 12677788899999777765
|
| >3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=96.78 E-value=0.002 Score=55.43 Aligned_cols=41 Identities=12% Similarity=0.135 Sum_probs=35.1
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcccc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAM 137 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~ 137 (198)
+..+++++|+|| |.+|+.++..|.+.|. +|.+..|+++++.
T Consensus 117 ~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~ 158 (272)
T 3pwz_A 117 PLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKAL 158 (272)
T ss_dssp CCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHH
T ss_pred CccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHH
Confidence 345789999998 7899999999999995 8999999887654
|
| >3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A | Back alignment and structure |
|---|
Probab=96.77 E-value=0.0068 Score=54.65 Aligned_cols=88 Identities=14% Similarity=0.092 Sum_probs=52.0
Q ss_pred CeEEEEcCCChHHHHHHH-HHHHCC---CcEEEEEeCCc-ccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC-hh
Q 029118 100 DAVLVTDGDSDIGQMVIL-SLIVKR---TRIKALVKDKR-NAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-EG 173 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr-~Ll~~G---~~VralvR~~~-~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a-~G 173 (198)
++|.|.||||++|+.+++ .|.++. .+++.+.-+.. +....+.. .+...-+..+++. ++++|.||.+. .+
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~aG~~~~~~~~-~~~~~~~~~~~~~----~~~~Dvvf~a~~~~ 75 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAPNFGK-DAGMLHDAFDIES----LKQLDAVITCQGGS 75 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCCSSS-CCCBCEETTCHHH----HTTCSEEEECSCHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEeccccCcCHHHhCC-CceEEEecCChhH----hccCCEEEECCChH
Confidence 479999999999999999 555544 25666642211 11111221 1222224444433 58999999883 33
Q ss_pred H---HHHHHHhCCCC-eEEEEcc
Q 029118 174 F---ISNAGSLKGVQ-HVILLSQ 192 (198)
Q Consensus 174 ~---lldAA~~~GVk-RiV~vSS 192 (198)
. +...+.++|++ ++|=.|+
T Consensus 76 ~s~~~~~~~~~~G~k~~VID~ss 98 (370)
T 3pzr_A 76 YTEKVYPALRQAGWKGYWIDAAS 98 (370)
T ss_dssp HHHHHHHHHHHTTCCCEEEECSS
T ss_pred HHHHHHHHHHHCCCCEEEEeCCc
Confidence 2 56666788985 5555554
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=96.77 E-value=0.0022 Score=56.38 Aligned_cols=74 Identities=9% Similarity=0.085 Sum_probs=53.9
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeC---Ccccccc---cC--CceEEEEccCCCHHHHHHhhcCccE
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKD---KRNAMES---FG--TYVESMAGDASNKKFLKTALRGVRS 166 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~---~~~a~~~---~g--~~vevV~GDl~D~~sL~~AL~GvDa 166 (198)
+..++++||+|| |.+|+.++..|.+.|. +|.+..|+ .+++... ++ ...++...++.+.+.+.+++.++|.
T Consensus 145 ~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~Di 223 (312)
T 3t4e_A 145 DMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADI 223 (312)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSE
T ss_pred CcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceE
Confidence 356789999998 8999999999999998 79999999 4444321 11 1234445566675556677888899
Q ss_pred EEEc
Q 029118 167 IICP 170 (198)
Q Consensus 167 VIh~ 170 (198)
||++
T Consensus 224 IINa 227 (312)
T 3t4e_A 224 LTNG 227 (312)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9876
|
| >3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=96.77 E-value=0.0054 Score=54.20 Aligned_cols=67 Identities=7% Similarity=0.195 Sum_probs=49.7
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCC--cEEEEEeCCcccc----c-----ccCCceEEEEccCCCHHHHHHhhcCc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAM----E-----SFGTYVESMAGDASNKKFLKTALRGV 164 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~--~VralvR~~~~a~----~-----~~g~~vevV~GDl~D~~sL~~AL~Gv 164 (198)
+..+++|.|+|| |.+|+.++..|+..+. +|.++.++++++. . .+...+.+..+| .++++++
T Consensus 6 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~-------~~a~~~a 77 (326)
T 3vku_A 6 DKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE-------YSDAKDA 77 (326)
T ss_dssp -CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC-------GGGGTTC
T ss_pred cCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc-------HHHhcCC
Confidence 566789999997 9999999999998887 8999988765432 1 111245555544 4679999
Q ss_pred cEEEEc
Q 029118 165 RSIICP 170 (198)
Q Consensus 165 DaVIh~ 170 (198)
|.||++
T Consensus 78 DiVvi~ 83 (326)
T 3vku_A 78 DLVVIT 83 (326)
T ss_dssp SEEEEC
T ss_pred CEEEEC
Confidence 999987
|
| >1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.76 E-value=0.00095 Score=56.97 Aligned_cols=70 Identities=13% Similarity=0.031 Sum_probs=47.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCC-ceEEEEc------cCC-CHHHHHHhhcCccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT-YVESMAG------DAS-NKKFLKTALRGVRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~-~vevV~G------Dl~-D~~sL~~AL~GvDaVIh~ 170 (198)
++|+|.|+ |.+|..++..|..+|++|.++.|++++....... .+.+... .+. -..++.++++++|.||.+
T Consensus 5 mki~iiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~ 82 (359)
T 1bg6_A 5 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIV 82 (359)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEEC
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEEe
Confidence 68999996 9999999999999999999999987654322110 1221100 010 112355678899999987
|
| >4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0022 Score=58.67 Aligned_cols=72 Identities=10% Similarity=0.012 Sum_probs=53.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEcc----------------CCC------HH
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGD----------------ASN------KK 155 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GD----------------l~D------~~ 155 (198)
+..+|+|+|+ |-+|..+++.|...|.+|+++.|++.+.......+.+++..+ +++ ..
T Consensus 189 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~ 267 (405)
T 4dio_A 189 PAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA 267 (405)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHH
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence 5679999999 999999999999999999999998865432211123433322 222 46
Q ss_pred HHHHhhcCccEEEEc
Q 029118 156 FLKTALRGVRSIICP 170 (198)
Q Consensus 156 sL~~AL~GvDaVIh~ 170 (198)
.+.++++++|.||.+
T Consensus 268 ~l~e~l~~aDVVI~t 282 (405)
T 4dio_A 268 LVAEHIAKQDIVITT 282 (405)
T ss_dssp HHHHHHHTCSEEEEC
T ss_pred HHHHHhcCCCEEEEC
Confidence 899999999999976
|
| >4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0012 Score=57.13 Aligned_cols=82 Identities=9% Similarity=0.095 Sum_probs=49.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHC-CCcEEEE-EeCCccc-----ccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVK-RTRIKAL-VKDKRNA-----MESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~-G~~Vral-vR~~~~a-----~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a 171 (198)
+.+|.|+||+|.+|+.+++.+.+. ++++.+. +|++... .+..+ .. . ++.-.+++.++++.+|+||.+.
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g--~~--~-gv~v~~dl~~ll~~~DVVIDfT 81 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLG--KQ--T-GVALTDDIERVCAEADYLIDFT 81 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTT--CC--C-SCBCBCCHHHHHHHCSEEEECS
T ss_pred ccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhC--CC--C-CceecCCHHHHhcCCCEEEEcC
Confidence 468999999999999999998864 6777775 4553321 11111 00 0 1111224455566789998762
Q ss_pred -hh---HHHHHHHhCCCC
Q 029118 172 -EG---FISNAGSLKGVQ 185 (198)
Q Consensus 172 -~G---~lldAA~~~GVk 185 (198)
.. ..++.|.++|+.
T Consensus 82 ~p~a~~~~~~~al~~G~~ 99 (272)
T 4f3y_A 82 LPEGTLVHLDAALRHDVK 99 (272)
T ss_dssp CHHHHHHHHHHHHHHTCE
T ss_pred CHHHHHHHHHHHHHcCCC
Confidence 21 156666777765
|
| >1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0014 Score=55.81 Aligned_cols=67 Identities=13% Similarity=0.177 Sum_probs=44.9
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc--ccCCceEEEEccCCCH--HHHHHhh-cCccEEEEc
Q 029118 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASNK--KFLKTAL-RGVRSIICP 170 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~--~~g~~vevV~GDl~D~--~sL~~AL-~GvDaVIh~ 170 (198)
+|||+||+|-+|..++..+...|.+|.++++++++... .++ .+.+ .|..+. +.+.+.. .++|.||.+
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lG--a~~~-i~~~~~~~~~~~~~~~~~~d~vid~ 223 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLG--AKEV-LAREDVMAERIRPLDKQRWAAAVDP 223 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTT--CSEE-EECC---------CCSCCEEEEEEC
T ss_pred eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcC--CcEE-EecCCcHHHHHHHhcCCcccEEEEC
Confidence 79999999999999999988899999999998765432 234 2222 244443 1222222 368999987
|
| >3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0071 Score=54.67 Aligned_cols=90 Identities=13% Similarity=0.040 Sum_probs=53.7
Q ss_pred CCCeEEEEcCCChHHHHHHH-HHHHCC---CcEEEEEeCCc-ccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC-
Q 029118 98 ARDAVLVTDGDSDIGQMVIL-SLIVKR---TRIKALVKDKR-NAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS- 171 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr-~Ll~~G---~~VralvR~~~-~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a- 171 (198)
.+.+|.|.||||++|+.+++ .|.++. .+++.+.-+.. +....+... +...-+..+++. ++++|.||.+.
T Consensus 3 ~~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~aG~~~~~~~~~-~~~v~~~~~~~~----~~~vDvvf~a~~ 77 (377)
T 3uw3_A 3 GSMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTSNAGGKAPSFAKN-ETTLKDATSIDD----LKKCDVIITCQG 77 (377)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSCTTSBCCTTCCS-CCBCEETTCHHH----HHTCSEEEECSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEechhcCCCHHHcCCC-ceEEEeCCChhH----hcCCCEEEECCC
Confidence 35689999999999999999 555444 35666642211 111112211 222224444433 57999999883
Q ss_pred hhH---HHHHHHhCCCC-eEEEEcc
Q 029118 172 EGF---ISNAGSLKGVQ-HVILLSQ 192 (198)
Q Consensus 172 ~G~---lldAA~~~GVk-RiV~vSS 192 (198)
.+. +...+.++|++ ++|=.|+
T Consensus 78 ~~~s~~~~~~~~~~G~k~~VID~ss 102 (377)
T 3uw3_A 78 GDYTNDVFPKLRAAGWNGYWIDAAS 102 (377)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred hHHHHHHHHHHHHCCCCEEEEeCCc
Confidence 332 56667788985 5555554
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0096 Score=51.43 Aligned_cols=93 Identities=12% Similarity=0.016 Sum_probs=59.0
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCc-EEEEEeCCccccc--ccCCceEEEEccCCCHHHHHHhh------cCccEE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNAME--SFGTYVESMAGDASNKKFLKTAL------RGVRSI 167 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~-VralvR~~~~a~~--~~g~~vevV~GDl~D~~sL~~AL------~GvDaV 167 (198)
.++++|||+|| |-+|...+..+...|.+ |.+.++++++... .+...+-....|-.+.+.+.+.+ +|+|.|
T Consensus 178 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvv 256 (363)
T 3m6i_A 178 RLGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAVA 256 (363)
T ss_dssp CTTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhchhcccccccccchHHHHHHHHHHhCCCCCCEE
Confidence 45789999998 99999999988889997 8888887765321 12323322333333444444433 379999
Q ss_pred EEcC--hhH---HHHHHHhCCCCeEEEEcc
Q 029118 168 ICPS--EGF---ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 168 Ih~a--~G~---lldAA~~~GVkRiV~vSS 192 (198)
|.+. ..+ .+++.+.. .|+|.+..
T Consensus 257 id~~g~~~~~~~~~~~l~~~--G~iv~~G~ 284 (363)
T 3m6i_A 257 LECTGVESSIAAAIWAVKFG--GKVFVIGV 284 (363)
T ss_dssp EECSCCHHHHHHHHHHSCTT--CEEEECCC
T ss_pred EECCCChHHHHHHHHHhcCC--CEEEEEcc
Confidence 9883 222 33333333 57887754
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0012 Score=59.33 Aligned_cols=40 Identities=15% Similarity=0.199 Sum_probs=35.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA 136 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a 136 (198)
.++++|||+||+|-||...+..+...|.+|.++++++++.
T Consensus 227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~ 266 (456)
T 3krt_A 227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKA 266 (456)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHH
Confidence 4577899999999999999999999999999999877654
|
| >2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A* | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0012 Score=55.14 Aligned_cols=63 Identities=11% Similarity=-0.076 Sum_probs=46.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
++|.|.| .|.+|+.+++.|...|++|.+..|++++.......++++ .. ++.++++++|.||.+
T Consensus 1 m~i~iiG-~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~----~~---~~~~~~~~~Dvvi~~ 63 (296)
T 2gf2_A 1 MPVGFIG-LGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQV----VS---SPADVAEKADRIITM 63 (296)
T ss_dssp CCEEEEC-CSTTHHHHHHHHHHTTCCEEEECSSTHHHHHHHTTTCEE----CS---SHHHHHHHCSEEEEC
T ss_pred CeEEEEe-ccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCee----cC---CHHHHHhcCCEEEEe
Confidence 4688998 699999999999999999999999887654332223432 12 334567778999877
|
| >1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.71 E-value=0.0043 Score=53.94 Aligned_cols=91 Identities=14% Similarity=0.135 Sum_probs=56.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCccccc--ccCCceEEEEccCCC-----HHHHHHhh-cCccEE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAME--SFGTYVESMAGDASN-----KKFLKTAL-RGVRSI 167 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~~--~~g~~vevV~GDl~D-----~~sL~~AL-~GvDaV 167 (198)
.++++|||+|+ |-+|..++..+...|. +|.++++++++... .++ ++.+ .|..+ .+.+.++. .++|.|
T Consensus 191 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lG--a~~v-i~~~~~~~~~~~~~~~~~~~g~D~v 266 (374)
T 1cdo_A 191 EPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFG--ATDF-VNPNDHSEPISQVLSKMTNGGVDFS 266 (374)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTT--CCEE-ECGGGCSSCHHHHHHHHHTSCBSEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhC--CceE-EeccccchhHHHHHHHHhCCCCCEE
Confidence 35679999996 9999999998888998 79999888766432 234 3222 23332 12233332 379999
Q ss_pred EEcC-h-hHH---HHHHHhCCCCeEEEEcc
Q 029118 168 ICPS-E-GFI---SNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 168 Ih~a-~-G~l---ldAA~~~GVkRiV~vSS 192 (198)
|.+. . .++ +++.+.. -.|+|.+..
T Consensus 267 id~~g~~~~~~~~~~~l~~~-~G~iv~~G~ 295 (374)
T 1cdo_A 267 LECVGNVGVMRNALESCLKG-WGVSVLVGW 295 (374)
T ss_dssp EECSCCHHHHHHHHHTBCTT-TCEEEECSC
T ss_pred EECCCCHHHHHHHHHHhhcC-CcEEEEEcC
Confidence 9883 2 222 2222222 148888764
|
| >1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.70 E-value=0.00079 Score=56.42 Aligned_cols=63 Identities=14% Similarity=0.037 Sum_probs=46.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
++|.|.| .|.+|+.+++.|...|++|.+..|++++.......++.+ .. ++.++++++|.||.+
T Consensus 6 m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~----~~---~~~~~~~~~D~vi~~ 68 (299)
T 1vpd_A 6 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAET----AS---TAKAIAEQCDVIITM 68 (299)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE----CS---SHHHHHHHCSEEEEC
T ss_pred ceEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCee----cC---CHHHHHhCCCEEEEE
Confidence 5899999 699999999999999999999988876543322122332 22 345567788999877
|
| >3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri} | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0011 Score=55.65 Aligned_cols=64 Identities=8% Similarity=0.025 Sum_probs=46.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+++|.|.| .|.+|+.+++.|...|++|.+..|++++.......++.+ .. ++.++++++|.||.+
T Consensus 4 ~~~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~----~~---~~~~~~~~~D~vi~~ 67 (301)
T 3cky_A 4 SIKIGFIG-LGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQGAQA----CE---NNQKVAAASDIIFTS 67 (301)
T ss_dssp CCEEEEEC-CCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTTTCEE----CS---SHHHHHHHCSEEEEC
T ss_pred CCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCee----cC---CHHHHHhCCCEEEEE
Confidence 46899998 699999999999999999999988876543332223332 12 345566778999877
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0019 Score=55.68 Aligned_cols=71 Identities=13% Similarity=0.165 Sum_probs=49.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc--ccCCceEEEEccCCC--HHHHHHhh-cCccEEEEcC
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASN--KKFLKTAL-RGVRSIICPS 171 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~--~~g~~vevV~GDl~D--~~sL~~AL-~GvDaVIh~a 171 (198)
++++|||+||+|-+|..++..+...|.+|.++++++++... .++. ..++ |..+ .+.+.+.- .|+|.||.+.
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa-~~vi--~~~~~~~~~~~~~~~~g~Dvv~d~~ 225 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGA-DIVL--NHKESLLNQFKTQGIELVDYVFCTF 225 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTC-SEEE--CTTSCHHHHHHHHTCCCEEEEEESS
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCC-cEEE--ECCccHHHHHHHhCCCCccEEEECC
Confidence 67899999999999999999999999999999987765422 2342 1222 2222 22333331 3789999883
|
| >1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A* | Back alignment and structure |
|---|
Probab=96.68 E-value=0.0019 Score=58.18 Aligned_cols=73 Identities=12% Similarity=0.055 Sum_probs=52.0
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCC-------------CH-------HH
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDAS-------------NK-------KF 156 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~-------------D~-------~s 156 (198)
.+..+|+|+|+ |-+|..+++.|...|.+|+++.|++.+.......+.+++..|.. +. +.
T Consensus 170 l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 248 (401)
T 1x13_A 170 VPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMEL 248 (401)
T ss_dssp ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHH
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHH
Confidence 56789999996 99999999999999999999998876543221113444432221 11 25
Q ss_pred HHHhhcCccEEEEc
Q 029118 157 LKTALRGVRSIICP 170 (198)
Q Consensus 157 L~~AL~GvDaVIh~ 170 (198)
+.+++.++|.||.+
T Consensus 249 l~e~~~~aDvVI~~ 262 (401)
T 1x13_A 249 FAAQAKEVDIIVTT 262 (401)
T ss_dssp HHHHHHHCSEEEEC
T ss_pred HHHHhCCCCEEEEC
Confidence 78888999999977
|
| >3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0016 Score=55.42 Aligned_cols=62 Identities=5% Similarity=-0.151 Sum_probs=47.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
++|.|.| .|.+|..+++.|.++||+|++..|++++.......++++ . .++.++++ +|.||.+
T Consensus 16 ~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~----~---~~~~~~~~-aDvvi~~ 77 (296)
T 3qha_A 16 LKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATL----A---DSVADVAA-ADLIHIT 77 (296)
T ss_dssp CCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEE----C---SSHHHHTT-SSEEEEC
T ss_pred CeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEE----c---CCHHHHHh-CCEEEEE
Confidence 5799997 699999999999999999999999987754432223332 1 24566777 8988877
|
| >3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0012 Score=54.78 Aligned_cols=70 Identities=10% Similarity=0.031 Sum_probs=47.7
Q ss_pred CccccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc--------------cccccC--CceEEEEccCCCHH
Q 029118 92 DEFPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--------------AMESFG--TYVESMAGDASNKK 155 (198)
Q Consensus 92 ~~~~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~--------------a~~~~g--~~vevV~GDl~D~~ 155 (198)
..+.....++|.|.| +|.+|+.+++.|+++||+|.+..|++++ ...... .... ..
T Consensus 12 ~~~~~~~~~kIgiIG-~G~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~ 82 (245)
T 3dtt_A 12 HENLYFQGMKIAVLG-TGTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVH--------LA 82 (245)
T ss_dssp -------CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCE--------EE
T ss_pred ccccccCCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCcee--------cc
Confidence 344567788999996 9999999999999999999999998875 111110 1111 23
Q ss_pred HHHHhhcCccEEEEc
Q 029118 156 FLKTALRGVRSIICP 170 (198)
Q Consensus 156 sL~~AL~GvDaVIh~ 170 (198)
+..++++++|.||.+
T Consensus 83 ~~~e~~~~aDvVila 97 (245)
T 3dtt_A 83 AFADVAAGAELVVNA 97 (245)
T ss_dssp EHHHHHHHCSEEEEC
T ss_pred CHHHHHhcCCEEEEc
Confidence 456788899999987
|
| >1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* | Back alignment and structure |
|---|
Probab=96.63 E-value=0.0048 Score=53.70 Aligned_cols=91 Identities=11% Similarity=0.067 Sum_probs=56.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCccccc--ccCCceEEEEccCCC-----HHHHHHhh-cCccEEE
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAME--SFGTYVESMAGDASN-----KKFLKTAL-RGVRSII 168 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~~--~~g~~vevV~GDl~D-----~~sL~~AL-~GvDaVI 168 (198)
++++|||+|+ |-+|..++..+...|. +|.++++++++... .++ ++.+ .|..+ .+.+.++. .|+|.||
T Consensus 195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lG--a~~v-i~~~~~~~~~~~~v~~~~~~g~Dvvi 270 (376)
T 1e3i_A 195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALG--ATDC-LNPRELDKPVQDVITELTAGGVDYSL 270 (376)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTT--CSEE-ECGGGCSSCHHHHHHHHHTSCBSEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhC--CcEE-EccccccchHHHHHHHHhCCCccEEE
Confidence 5679999996 9999999988888998 79999888766432 234 3222 23332 12233332 3799999
Q ss_pred EcC-h-hHHHHHHHhCC-C-CeEEEEcc
Q 029118 169 CPS-E-GFISNAGSLKG-V-QHVILLSQ 192 (198)
Q Consensus 169 h~a-~-G~lldAA~~~G-V-kRiV~vSS 192 (198)
.+. . .++-++.+... - .++|.++.
T Consensus 271 d~~G~~~~~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 271 DCAGTAQTLKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp ESSCCHHHHHHHHHTBCTTTCEEEECCC
T ss_pred ECCCCHHHHHHHHHHhhcCCCEEEEECC
Confidence 883 2 23323222222 1 48887764
|
| >1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0026 Score=55.83 Aligned_cols=91 Identities=9% Similarity=0.045 Sum_probs=58.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCC-CcEEEEEeCCccccc--ccCCceEEEEccCC---CHH---HHHHhhc--Ccc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAME--SFGTYVESMAGDAS---NKK---FLKTALR--GVR 165 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G-~~VralvR~~~~a~~--~~g~~vevV~GDl~---D~~---sL~~AL~--GvD 165 (198)
.++++|||+| +|-+|...+..+...| .+|.++++++++... .++. ..++ |.. +.+ .+.++.. |+|
T Consensus 194 ~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa-~~vi--~~~~~~~~~~~~~v~~~~~g~g~D 269 (380)
T 1vj0_A 194 FAGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGA-DLTL--NRRETSVEERRKAIMDITHGRGAD 269 (380)
T ss_dssp CBTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTC-SEEE--ETTTSCHHHHHHHHHHHTTTSCEE
T ss_pred CCCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCC-cEEE--eccccCcchHHHHHHHHhCCCCCc
Confidence 3567999999 8999999999888899 699999988765432 2342 1233 333 222 2333333 799
Q ss_pred EEEEcC--hhH---HHHHHHhCCCCeEEEEccc
Q 029118 166 SIICPS--EGF---ISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 166 aVIh~a--~G~---lldAA~~~GVkRiV~vSS~ 193 (198)
.||.+. ... .+++.+..| ++|.++..
T Consensus 270 vvid~~g~~~~~~~~~~~l~~~G--~iv~~G~~ 300 (380)
T 1vj0_A 270 FILEATGDSRALLEGSELLRRGG--FYSVAGVA 300 (380)
T ss_dssp EEEECSSCTTHHHHHHHHEEEEE--EEEECCCC
T ss_pred EEEECCCCHHHHHHHHHHHhcCC--EEEEEecC
Confidence 999883 222 344444443 77777543
|
| >3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0069 Score=52.81 Aligned_cols=94 Identities=12% Similarity=0.017 Sum_probs=58.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcccccccCCceEEEEccCC----C-HHHHHHhh-cCccEEEE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDAS----N-KKFLKTAL-RGVRSIIC 169 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~~~~g~~vevV~GDl~----D-~~sL~~AL-~GvDaVIh 169 (198)
.++++|||+|| |-+|...+..+...|. +|.++.+++++.......+++.+ .|.. + .+.+.++. .|+|.||.
T Consensus 192 ~~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~v-i~~~~~~~~~~~~i~~~~~gg~D~vid 269 (378)
T 3uko_A 192 EPGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEF-VNPKDHDKPIQEVIVDLTDGGVDYSFE 269 (378)
T ss_dssp CTTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEE-ECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEE-EccccCchhHHHHHHHhcCCCCCEEEE
Confidence 35678999998 9999999988888898 89999988876543222223322 2332 2 23333333 37999998
Q ss_pred cC--hhHHHHHHHhCC--CCeEEEEcc
Q 029118 170 PS--EGFISNAGSLKG--VQHVILLSQ 192 (198)
Q Consensus 170 ~a--~G~lldAA~~~G--VkRiV~vSS 192 (198)
+. ..++-.+.+... -.++|.++.
T Consensus 270 ~~g~~~~~~~~~~~l~~g~G~iv~~G~ 296 (378)
T 3uko_A 270 CIGNVSVMRAALECCHKGWGTSVIVGV 296 (378)
T ss_dssp CSCCHHHHHHHHHTBCTTTCEEEECSC
T ss_pred CCCCHHHHHHHHHHhhccCCEEEEEcc
Confidence 83 223333323222 258887764
|
| >1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A | Back alignment and structure |
|---|
Probab=96.61 E-value=0.0048 Score=53.43 Aligned_cols=90 Identities=14% Similarity=0.098 Sum_probs=56.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcccc--cccCCceEEEEccCC--C-HHH---HHHhh-cCccE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAM--ESFGTYVESMAGDAS--N-KKF---LKTAL-RGVRS 166 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~--~~~g~~vevV~GDl~--D-~~s---L~~AL-~GvDa 166 (198)
.++++|||+|+ |-+|...+..+...|. +|.++++++++.. ..++.. +++ |.. | .+. +.+.. +|+|.
T Consensus 170 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~-~vi--~~~~~~~~~~~~~i~~~~~~g~D~ 245 (356)
T 1pl8_A 170 TLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGAD-LVL--QISKESPQEIARKVEGQLGCKPEV 245 (356)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCS-EEE--ECSSCCHHHHHHHHHHHHTSCCSE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCC-EEE--cCcccccchHHHHHHHHhCCCCCE
Confidence 35789999996 9999999988888998 8999998776532 223421 222 444 2 222 22222 58999
Q ss_pred EEEcC--hhH---HHHHHHhCCCCeEEEEcc
Q 029118 167 IICPS--EGF---ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 167 VIh~a--~G~---lldAA~~~GVkRiV~vSS 192 (198)
||.+. ..+ .+++.+.. .++|.++.
T Consensus 246 vid~~g~~~~~~~~~~~l~~~--G~iv~~G~ 274 (356)
T 1pl8_A 246 TIECTGAEASIQAGIYATRSG--GTLVLVGL 274 (356)
T ss_dssp EEECSCCHHHHHHHHHHSCTT--CEEEECSC
T ss_pred EEECCCChHHHHHHHHHhcCC--CEEEEEec
Confidence 99883 222 33433333 47877753
|
| >2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... | Back alignment and structure |
|---|
Probab=96.61 E-value=0.0054 Score=53.33 Aligned_cols=90 Identities=12% Similarity=0.091 Sum_probs=56.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCccccc--ccCCceEEEEccCCC-----HHHHHHhh-cCccEEE
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAME--SFGTYVESMAGDASN-----KKFLKTAL-RGVRSII 168 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~~--~~g~~vevV~GDl~D-----~~sL~~AL-~GvDaVI 168 (198)
++++|||+|+ |-+|..++..+...|. +|.++++++++... .++ ++.+ .|..+ .+.+.++. .++|.||
T Consensus 191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lG--a~~v-i~~~~~~~~~~~~~~~~~~~g~D~vi 266 (374)
T 2jhf_A 191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVG--ATEC-VNPQDYKKPIQEVLTEMSNGGVDFSF 266 (374)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTT--CSEE-ECGGGCSSCHHHHHHHHTTSCBSEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhC--CceE-ecccccchhHHHHHHHHhCCCCcEEE
Confidence 5679999995 9999999998888998 79999888766432 234 3222 23332 12233332 3799999
Q ss_pred EcC-h-hHH---HHHHHhCCCCeEEEEcc
Q 029118 169 CPS-E-GFI---SNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 169 h~a-~-G~l---ldAA~~~GVkRiV~vSS 192 (198)
.+. . .++ +++++.. -.++|.+..
T Consensus 267 d~~g~~~~~~~~~~~l~~~-~G~iv~~G~ 294 (374)
T 2jhf_A 267 EVIGRLDTMVTALSCCQEA-YGVSVIVGV 294 (374)
T ss_dssp ECSCCHHHHHHHHHHBCTT-TCEEEECSC
T ss_pred ECCCCHHHHHHHHHHhhcC-CcEEEEecc
Confidence 883 2 232 3333332 147887754
|
| >4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.61 E-value=0.0014 Score=53.55 Aligned_cols=62 Identities=10% Similarity=0.064 Sum_probs=46.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEE-EEeCCcccccc---cCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKA-LVKDKRNAMES---FGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~Vra-lvR~~~~a~~~---~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+++|.|.| +|.+|+.+++.|.++|++|.+ ..|++++.... ++ +.... .+ .++++++|.||.+
T Consensus 23 mmkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g--~~~~~---~~----~~~~~~aDvVila 88 (220)
T 4huj_A 23 MTTYAIIG-AGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRFG--ASVKA---VE----LKDALQADVVILA 88 (220)
T ss_dssp SCCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHT--TTEEE---CC----HHHHTTSSEEEEE
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhC--CCccc---Ch----HHHHhcCCEEEEe
Confidence 57899999 899999999999999999999 77887765432 23 22221 12 3457889999987
|
| >2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=96.60 E-value=0.0035 Score=50.86 Aligned_cols=37 Identities=5% Similarity=0.073 Sum_probs=31.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~ 134 (198)
...++|.|.| .|.+|+.++..|..+|++|.+..|+++
T Consensus 17 ~~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 17 FQGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp ---CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 4567899999 799999999999999999999988765
|
| >1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A* | Back alignment and structure |
|---|
Probab=96.60 E-value=0.005 Score=50.69 Aligned_cols=66 Identities=9% Similarity=0.028 Sum_probs=45.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccccc--C-CceEE-EEccCCCHHHHHHhhcCccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--G-TYVES-MAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~--g-~~vev-V~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
++|.|.|+ |.+|..++..|.++|++|.++.|++++..... + .+..+ ......++ ++++++|.||.+
T Consensus 1 m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~d~vi~~ 70 (291)
T 1ks9_A 1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDP----DFLATSDLLLVT 70 (291)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCH----HHHHTCSEEEEC
T ss_pred CeEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCccceeeEEEEcCCCceeeeeeeecCc----cccCCCCEEEEE
Confidence 47999998 99999999999999999999999886543211 1 01110 00111232 456789999987
|
| >4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A* | Back alignment and structure |
|---|
Probab=96.57 E-value=0.01 Score=51.20 Aligned_cols=69 Identities=9% Similarity=0.027 Sum_probs=52.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEcc-CCCHHHHHHhhcCccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGD-ASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GD-l~D~~sL~~AL~GvDaVIh~ 170 (198)
+++|+|.| .|..|..++..+.+.|++|.++..++......+. -+++..| ..|.+.+....+++|+|+-.
T Consensus 1 MK~I~ilG-gg~~g~~~~~~Ak~~G~~vv~vd~~~~~~~~~~a--D~~~~~~~~~d~~~~~~~~~~~D~v~~~ 70 (363)
T 4ffl_A 1 MKTICLVG-GKLQGFEAAYLSKKAGMKVVLVDKNPQALIRNYA--DEFYCFDVIKEPEKLLELSKRVDAVLPV 70 (363)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTTS--SEEEECCTTTCHHHHHHHHTSSSEEEEC
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCChhHhhC--CEEEECCCCcCHHHHHHHhcCCCEEEEC
Confidence 58999998 5799999999999999999999887754322222 2444445 46888888888999998754
|
| >3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=96.56 E-value=0.0031 Score=56.13 Aligned_cols=67 Identities=12% Similarity=0.081 Sum_probs=48.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCC--CcEEEEEeCCccccc----c----cC-CceEEEEccCCCHHHHHHhhcCcc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAME----S----FG-TYVESMAGDASNKKFLKTALRGVR 165 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G--~~VralvR~~~~a~~----~----~g-~~vevV~GDl~D~~sL~~AL~GvD 165 (198)
.++++|.|+||+|++|+.++..|+.+| .+|.++.++.+++.. + +. ..+. -.....++++++|
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~-------~t~d~~~al~dAD 78 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLT-------FTSDIKEALTDAK 78 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCE-------EESCHHHHHTTEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceE-------EcCCHHHHhCCCC
Confidence 346789999999999999999999988 589999877654321 1 11 1122 1234578899999
Q ss_pred EEEEc
Q 029118 166 SIICP 170 (198)
Q Consensus 166 aVIh~ 170 (198)
.||++
T Consensus 79 vVvit 83 (343)
T 3fi9_A 79 YIVSS 83 (343)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 99987
|
| >3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=96.56 E-value=0.0027 Score=54.03 Aligned_cols=65 Identities=8% Similarity=-0.095 Sum_probs=45.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+++|.|.| .|.+|..+++.|.++|++|++..|++++.......++..+.. ++.++++++|.||.+
T Consensus 7 ~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~------~~~e~~~~aDvvi~~ 71 (303)
T 3g0o_A 7 DFHVGIVG-LGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAA------SAREFAGVVDALVIL 71 (303)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEES------SSTTTTTTCSEEEEC
T ss_pred CCeEEEEC-CCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccC------CHHHHHhcCCEEEEE
Confidence 46899996 699999999999999999999999886653322112222122 234466777777766
|
| >3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=96.55 E-value=0.00079 Score=55.73 Aligned_cols=65 Identities=12% Similarity=0.104 Sum_probs=47.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCc-EEEEEeCCcccccccCC-ceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~-VralvR~~~~a~~~~g~-~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
++++|.|.|+ |.+|+.+++.|...|++ |.+..|++++....... ++.+. . ++.++++++|.||.+
T Consensus 9 ~~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~----~---~~~~~~~~~Dvvi~a 75 (266)
T 3d1l_A 9 EDTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYT----T---DLAEVNPYAKLYIVS 75 (266)
T ss_dssp GGCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEE----S---CGGGSCSCCSEEEEC
T ss_pred CCCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCcee----C---CHHHHhcCCCEEEEe
Confidence 3468999997 99999999999999999 88888887654322111 23321 1 234567899999987
|
| >1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A* | Back alignment and structure |
|---|
Probab=96.55 E-value=0.013 Score=50.65 Aligned_cols=86 Identities=15% Similarity=0.081 Sum_probs=56.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCccccc----c------cCCceEEEEccCCCHHHHHHhhcCccEEE
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAME----S------FGTYVESMAGDASNKKFLKTALRGVRSII 168 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~~----~------~g~~vevV~GDl~D~~sL~~AL~GvDaVI 168 (198)
++|.|+|| |.+|..++..|...|+ +|+.+.++++++.. . .....++... +| . ++++++|.||
T Consensus 3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d---~-~a~~~aD~Vi 75 (309)
T 1ur5_A 3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NN---Y-ADTANSDVIV 75 (309)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SC---G-GGGTTCSEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEEC--CC---H-HHHCCCCEEE
Confidence 58999999 9999999999999997 88888777754321 0 0112222220 22 2 5799999999
Q ss_pred EcC-----hh---------------HHHHHHHhCCCCeEEEEcc
Q 029118 169 CPS-----EG---------------FISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 169 h~a-----~G---------------~lldAA~~~GVkRiV~vSS 192 (198)
.+. .| .+.+++.+...+.+|.+.|
T Consensus 76 ~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t 119 (309)
T 1ur5_A 76 VTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVN 119 (309)
T ss_dssp ECCCC--------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECC
T ss_pred EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcC
Confidence 872 11 0445555666777776655
|
| >2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.55 E-value=0.002 Score=54.64 Aligned_cols=64 Identities=3% Similarity=-0.078 Sum_probs=46.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
.++|.|.| .|.+|+.+++.|...|++|.+..|++++.......++.+ .. +..++++++|.||.+
T Consensus 30 ~~~I~iIG-~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~----~~---~~~~~~~~~DvVi~a 93 (316)
T 2uyy_A 30 DKKIGFLG-LGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARL----GR---TPAEVVSTCDITFAC 93 (316)
T ss_dssp SSCEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHHTTCEE----CS---CHHHHHHHCSEEEEC
T ss_pred CCeEEEEc-ccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHcCCEE----cC---CHHHHHhcCCEEEEe
Confidence 46799999 599999999999999999999999877654322122332 12 244567788988877
|
| >1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 | Back alignment and structure |
|---|
Probab=96.55 E-value=0.00079 Score=60.35 Aligned_cols=66 Identities=18% Similarity=0.239 Sum_probs=51.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcccc---cccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~---~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
.++++|+|.|+ |.+|+.+++.|...|. +|.+..|+++++. ..++ ++++ +.+.+.+++.++|.||.+
T Consensus 165 l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g--~~~~-----~~~~l~~~l~~aDvVi~a 234 (404)
T 1gpj_A 165 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG--GEAV-----RFDELVDHLARSDVVVSA 234 (404)
T ss_dssp CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT--CEEC-----CGGGHHHHHHTCSEEEEC
T ss_pred ccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcC--Ccee-----cHHhHHHHhcCCCEEEEc
Confidence 57889999998 9999999999999998 8999998876542 2233 3322 234577788999999987
|
| >1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A* | Back alignment and structure |
|---|
Probab=96.52 E-value=0.00059 Score=61.52 Aligned_cols=70 Identities=9% Similarity=-0.051 Sum_probs=47.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEE-------------EccCCCHHHHHHhhcCccE
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESM-------------AGDASNKKFLKTALRGVRS 166 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV-------------~GDl~D~~sL~~AL~GvDa 166 (198)
|+|.|.| +|.+|..++..|.++||+|+++.|++++..........+. .+.+.-..++.++++++|.
T Consensus 1 mkI~VIG-~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aDv 79 (436)
T 1mv8_A 1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDV 79 (436)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSE
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCCE
Confidence 4799998 7999999999999999999999998766432211100000 0111112234567889999
Q ss_pred EEEc
Q 029118 167 IICP 170 (198)
Q Consensus 167 VIh~ 170 (198)
||.+
T Consensus 80 viia 83 (436)
T 1mv8_A 80 SFIC 83 (436)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 9987
|
| >2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* | Back alignment and structure |
|---|
Probab=96.52 E-value=0.004 Score=54.01 Aligned_cols=91 Identities=16% Similarity=0.136 Sum_probs=55.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCccccc--ccCCceEEEEccCCC-----HHHHHHhh-cCccEEE
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAME--SFGTYVESMAGDASN-----KKFLKTAL-RGVRSII 168 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~~--~~g~~vevV~GDl~D-----~~sL~~AL-~GvDaVI 168 (198)
++++|||+|+ |-+|..++..+...|. +|.++++++++... .++. .+++ |..+ .+.+.++. .|+|.||
T Consensus 190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa-~~vi--~~~~~~~~~~~~v~~~~~~g~D~vi 265 (373)
T 2fzw_A 190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGA-TECI--NPQDFSKPIQEVLIEMTDGGVDYSF 265 (373)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTC-SEEE--CGGGCSSCHHHHHHHHTTSCBSEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCC-ceEe--ccccccccHHHHHHHHhCCCCCEEE
Confidence 5679999996 9999999988888898 79999888766432 2342 1222 3332 22333332 3799999
Q ss_pred EcC--hhHHHHHHHhCC-C-CeEEEEcc
Q 029118 169 CPS--EGFISNAGSLKG-V-QHVILLSQ 192 (198)
Q Consensus 169 h~a--~G~lldAA~~~G-V-kRiV~vSS 192 (198)
.+. ..++-++.+... - .|+|.+..
T Consensus 266 d~~g~~~~~~~~~~~l~~~~G~iv~~G~ 293 (373)
T 2fzw_A 266 ECIGNVKVMRAALEACHKGWGVSVVVGV 293 (373)
T ss_dssp ECSCCHHHHHHHHHTBCTTTCEEEECSC
T ss_pred ECCCcHHHHHHHHHhhccCCcEEEEEec
Confidence 883 223322222222 1 48887764
|
| >2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=96.52 E-value=0.017 Score=47.40 Aligned_cols=77 Identities=18% Similarity=0.112 Sum_probs=48.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEE-EeCCcccccccCCceEEEEccCCCHHHHHHhh-cCccEEEEcC-hhH--
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAMESFGTYVESMAGDASNKKFLKTAL-RGVRSIICPS-EGF-- 174 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~Vral-vR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL-~GvDaVIh~a-~G~-- 174 (198)
++|.|.|+ |.+|+.+++.|...|++|.++ .|++ ++.. + ..|+ ++++ .++|+||.+. ...
T Consensus 1 m~vgiIG~-G~mG~~~~~~l~~~g~~lv~v~d~~~-~~~~--------~---~~~~---~~l~~~~~DvVv~~~~~~~~~ 64 (236)
T 2dc1_A 1 MLVGLIGY-GAIGKFLAEWLERNGFEIAAILDVRG-EHEK--------M---VRGI---DEFLQREMDVAVEAASQQAVK 64 (236)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEECSSC-CCTT--------E---ESSH---HHHTTSCCSEEEECSCHHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHhcCCCEEEEEEecCc-chhh--------h---cCCH---HHHhcCCCCEEEECCCHHHHH
Confidence 47899997 999999999999899998654 4543 2211 1 2333 4445 6899998872 222
Q ss_pred -HHHHHHhCCCCeEEEEccc
Q 029118 175 -ISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 175 -lldAA~~~GVkRiV~vSS~ 193 (198)
++..+.++| +++|..|+.
T Consensus 65 ~~~~~~l~~G-~~vv~~~~~ 83 (236)
T 2dc1_A 65 DYAEKILKAG-IDLIVLSTG 83 (236)
T ss_dssp HHHHHHHHTT-CEEEESCGG
T ss_pred HHHHHHHHCC-CcEEEECcc
Confidence 344455555 355555543
|
| >1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A | Back alignment and structure |
|---|
Probab=96.50 E-value=0.0058 Score=52.70 Aligned_cols=92 Identities=11% Similarity=0.138 Sum_probs=56.8
Q ss_pred CC-CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc----c--ccccCCceEEEEcc-C--CC-HHHHHHhh----c
Q 029118 98 AR-DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN----A--MESFGTYVESMAGD-A--SN-KKFLKTAL----R 162 (198)
Q Consensus 98 ~~-~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~----a--~~~~g~~vevV~GD-l--~D-~~sL~~AL----~ 162 (198)
++ ++|||+||+|-+|..++..+...|.+|.++++++++ . ...++. ..++.-+ . .| .+.+.++. .
T Consensus 166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa-~~vi~~~~~~~~~~~~~i~~~t~~~~~ 244 (364)
T 1gu7_A 166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGA-TQVITEDQNNSREFGPTIKEWIKQSGG 244 (364)
T ss_dssp TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTC-SEEEEHHHHHCGGGHHHHHHHHHHHTC
T ss_pred CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCC-eEEEecCccchHHHHHHHHHHhhccCC
Confidence 45 899999999999999998888889999999987654 1 122342 1222211 0 11 22344443 4
Q ss_pred CccEEEEcChh-HH---HHHHHhCCCCeEEEEcc
Q 029118 163 GVRSIICPSEG-FI---SNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 163 GvDaVIh~a~G-~l---ldAA~~~GVkRiV~vSS 192 (198)
|+|.||.+..+ .. +++++.. .|+|.++.
T Consensus 245 g~Dvvid~~G~~~~~~~~~~l~~~--G~~v~~g~ 276 (364)
T 1gu7_A 245 EAKLALNCVGGKSSTGIARKLNNN--GLMLTYGG 276 (364)
T ss_dssp CEEEEEESSCHHHHHHHHHTSCTT--CEEEECCC
T ss_pred CceEEEECCCchhHHHHHHHhccC--CEEEEecC
Confidence 79999988422 22 2222322 47887754
|
| >3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=96.47 E-value=0.0014 Score=56.20 Aligned_cols=65 Identities=15% Similarity=0.096 Sum_probs=47.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
..++|.|.| .|.+|+.+++.|+++|++|.+..|++++.......++.. ..++.++++++|.||.+
T Consensus 8 ~~~~IgiIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~-------~~~~~e~~~~aDvVi~~ 72 (306)
T 3l6d_A 8 FEFDVSVIG-LGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAAGAHL-------CESVKAALSASPATIFV 72 (306)
T ss_dssp CSCSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTCEE-------CSSHHHHHHHSSEEEEC
T ss_pred CCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCee-------cCCHHHHHhcCCEEEEE
Confidence 356799997 699999999999999999999999887654322112221 12445667778888876
|
| >1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* | Back alignment and structure |
|---|
Probab=96.46 E-value=0.0059 Score=53.07 Aligned_cols=91 Identities=13% Similarity=0.071 Sum_probs=55.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCccccc--ccCCceEEEEccCCC-----HHHHHHhh-cCccEEE
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAME--SFGTYVESMAGDASN-----KKFLKTAL-RGVRSII 168 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~~--~~g~~vevV~GDl~D-----~~sL~~AL-~GvDaVI 168 (198)
++++|||+|+ |-+|..++..+...|. +|.++++++++... .++ ++.+ .|..+ .+.+.++. .|+|.||
T Consensus 191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lG--a~~v-i~~~~~~~~~~~~i~~~t~gg~Dvvi 266 (373)
T 1p0f_A 191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELG--ATEC-LNPKDYDKPIYEVICEKTNGGVDYAV 266 (373)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTT--CSEE-ECGGGCSSCHHHHHHHHTTSCBSEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcC--CcEE-EecccccchHHHHHHHHhCCCCCEEE
Confidence 4679999996 9999999988888898 79999888766432 234 3222 23322 12333332 3799999
Q ss_pred EcC-h-hHHHHHHHhCC--CCeEEEEcc
Q 029118 169 CPS-E-GFISNAGSLKG--VQHVILLSQ 192 (198)
Q Consensus 169 h~a-~-G~lldAA~~~G--VkRiV~vSS 192 (198)
.+. . .++-++.+... -.|+|.+..
T Consensus 267 d~~g~~~~~~~~~~~l~~~~G~iv~~G~ 294 (373)
T 1p0f_A 267 ECAGRIETMMNALQSTYCGSGVTVVLGL 294 (373)
T ss_dssp ECSCCHHHHHHHHHTBCTTTCEEEECCC
T ss_pred ECCCCHHHHHHHHHHHhcCCCEEEEEcc
Confidence 883 2 23333322222 148887764
|
| >3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* | Back alignment and structure |
|---|
Probab=96.43 E-value=0.011 Score=52.07 Aligned_cols=65 Identities=14% Similarity=0.107 Sum_probs=48.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC--cEEEEEeCCccccc----------ccCCceEEEEccCCCHHHHHHhhcCcc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAME----------SFGTYVESMAGDASNKKFLKTALRGVR 165 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~--~VralvR~~~~a~~----------~~g~~vevV~GDl~D~~sL~~AL~GvD 165 (198)
+.++|.|+|| |.+|..++..|+..|+ +|.++.++++++.. ..+..+++..+| .++++++|
T Consensus 4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~-------~~a~~~aD 75 (326)
T 3pqe_A 4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT-------YEDCKDAD 75 (326)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC-------GGGGTTCS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc-------HHHhCCCC
Confidence 4578999996 9999999999999887 89999887654321 111345555544 35899999
Q ss_pred EEEEc
Q 029118 166 SIICP 170 (198)
Q Consensus 166 aVIh~ 170 (198)
.||++
T Consensus 76 vVvi~ 80 (326)
T 3pqe_A 76 IVCIC 80 (326)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 99987
|
| >2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=96.42 E-value=0.0065 Score=53.47 Aligned_cols=71 Identities=10% Similarity=0.063 Sum_probs=50.1
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcccccccCCceEEEEccCCC----HHHHHHhhc--CccEEEE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASN----KKFLKTALR--GVRSIIC 169 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~~~~g~~vevV~GDl~D----~~sL~~AL~--GvDaVIh 169 (198)
.++++|||+|+ |-+|...+..+...|. +|.++++++++.......+++++ |..+ .+.+.+... |+|.||.
T Consensus 184 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~i--~~~~~~~~~~~~~~~~~g~g~Dvvid 260 (398)
T 2dph_A 184 KPGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFETI--DLRNSAPLRDQIDQILGKPEVDCGVD 260 (398)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTTCEEE--ETTSSSCHHHHHHHHHSSSCEEEEEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEE--cCCCcchHHHHHHHHhCCCCCCEEEE
Confidence 35779999997 9999999988888898 89999988765432222234544 4443 344555443 6999998
Q ss_pred c
Q 029118 170 P 170 (198)
Q Consensus 170 ~ 170 (198)
+
T Consensus 261 ~ 261 (398)
T 2dph_A 261 A 261 (398)
T ss_dssp C
T ss_pred C
Confidence 7
|
| >4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A* | Back alignment and structure |
|---|
Probab=96.41 E-value=0.0042 Score=55.57 Aligned_cols=86 Identities=16% Similarity=0.088 Sum_probs=51.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHC-CCcEEEEEeCCcc---cccccC-----------CceEEEEccCCCHHHHHHhhcC
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRN---AMESFG-----------TYVESMAGDASNKKFLKTALRG 163 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~-G~~VralvR~~~~---a~~~~g-----------~~vevV~GDl~D~~sL~~AL~G 163 (198)
+.+|.|.||||++|+.+++.|.++ ..+++.+..+.+. ....++ ....+.. .+++ .+.+
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~---~~~~----~~~~ 79 (359)
T 4dpl_A 7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKP---TDPK----LMDD 79 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEE---CCGG----GCTT
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccccceEEe---CCHH----HhcC
Confidence 357999999999999999966553 2367777643321 111111 0112211 1222 3579
Q ss_pred ccEEEEcC-hh---HHHHHHHhCCCCeEEEEcc
Q 029118 164 VRSIICPS-EG---FISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 164 vDaVIh~a-~G---~lldAA~~~GVkRiV~vSS 192 (198)
+|.||.+. .+ .+...+.++|+ ++|=+|+
T Consensus 80 vDvvf~a~p~~~s~~~a~~~~~~G~-~vIDlSa 111 (359)
T 4dpl_A 80 VDIIFSPLPQGAAGPVEEQFAKEGF-PVISNSP 111 (359)
T ss_dssp CCEEEECCCTTTHHHHHHHHHHTTC-EEEECSS
T ss_pred CCEEEECCChHHHHHHHHHHHHCCC-EEEEcCC
Confidence 99999882 22 26666677887 5566665
|
| >4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A* | Back alignment and structure |
|---|
Probab=96.41 E-value=0.0042 Score=55.57 Aligned_cols=86 Identities=16% Similarity=0.088 Sum_probs=51.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHC-CCcEEEEEeCCcc---cccccC-----------CceEEEEccCCCHHHHHHhhcC
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRN---AMESFG-----------TYVESMAGDASNKKFLKTALRG 163 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~-G~~VralvR~~~~---a~~~~g-----------~~vevV~GDl~D~~sL~~AL~G 163 (198)
+.+|.|.||||++|+.+++.|.++ ..+++.+..+.+. ....++ ....+.. .+++ .+.+
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~---~~~~----~~~~ 79 (359)
T 4dpk_A 7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKP---TDPK----LMDD 79 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEE---CCGG----GCTT
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccccceEEe---CCHH----HhcC
Confidence 357999999999999999966553 2367777643321 111111 0112211 1222 3579
Q ss_pred ccEEEEcC-hh---HHHHHHHhCCCCeEEEEcc
Q 029118 164 VRSIICPS-EG---FISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 164 vDaVIh~a-~G---~lldAA~~~GVkRiV~vSS 192 (198)
+|.||.+. .+ .+...+.++|+ ++|=+|+
T Consensus 80 vDvvf~a~p~~~s~~~a~~~~~~G~-~vIDlSa 111 (359)
T 4dpk_A 80 VDIIFSPLPQGAAGPVEEQFAKEGF-PVISNSP 111 (359)
T ss_dssp CCEEEECCCTTTHHHHHHHHHHTTC-EEEECSS
T ss_pred CCEEEECCChHHHHHHHHHHHHCCC-EEEEcCC
Confidence 99999882 22 26666677887 5566665
|
| >2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A | Back alignment and structure |
|---|
Probab=96.41 E-value=0.0056 Score=53.44 Aligned_cols=66 Identities=12% Similarity=-0.036 Sum_probs=49.1
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+..+++|.|.|. |.+|+.+++.|...|++|.+..|++.+.......+++.. ++.++++.+|.|+.+
T Consensus 152 ~l~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~--------~l~e~l~~aDvVi~~ 217 (330)
T 2gcg_A 152 GLTQSTVGIIGL-GRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFV--------STPELAAQSDFIVVA 217 (330)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHGGGTCCEEEEESSSCCHHHHHTTTCEEC--------CHHHHHHHCSEEEEC
T ss_pred CCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCcchhHHHhcCceeC--------CHHHHHhhCCEEEEe
Confidence 456789999986 999999999999999999999987754322211223321 356678899999865
|
| >2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=96.40 E-value=0.0059 Score=57.10 Aligned_cols=84 Identities=13% Similarity=0.153 Sum_probs=57.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC-C---cEEEEEeCCccc--ccccCCceEEEEccC--CCH-HHHHHhhcCccEEEE
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKR-T---RIKALVKDKRNA--MESFGTYVESMAGDA--SNK-KFLKTALRGVRSIIC 169 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G-~---~VralvR~~~~a--~~~~g~~vevV~GDl--~D~-~sL~~AL~GvDaVIh 169 (198)
.++|+|.| .|.||+.+++.|.++. + +|.+..++.... .+..+ +++...++ .|. +.+.+++++.|.||+
T Consensus 13 ~~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~~~g--~~~~~~~Vdadnv~~~l~aLl~~~DvVIN 89 (480)
T 2ph5_A 13 KNRFVILG-FGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQYG--VSFKLQQITPQNYLEVIGSTLEENDFLID 89 (480)
T ss_dssp CSCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHHHHT--CEEEECCCCTTTHHHHTGGGCCTTCEEEE
T ss_pred CCCEEEEC-cCHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHhhcC--CceeEEeccchhHHHHHHHHhcCCCEEEE
Confidence 46799999 8999999999888754 4 577665544322 12223 45555555 455 345668887899998
Q ss_pred cC----hhHHHHHHHhCCCC
Q 029118 170 PS----EGFISNAGSLKGVQ 185 (198)
Q Consensus 170 ~a----~G~lldAA~~~GVk 185 (198)
+. .-.++++|.++||-
T Consensus 90 ~s~~~~~l~Im~acleaGv~ 109 (480)
T 2ph5_A 90 VSIGISSLALIILCNQKGAL 109 (480)
T ss_dssp CCSSSCHHHHHHHHHHHTCE
T ss_pred CCccccCHHHHHHHHHcCCC
Confidence 73 22399999999964
|
| >3aw8_A PURK, phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp; HET: AMP; 2.60A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=96.39 E-value=0.0097 Score=51.41 Aligned_cols=66 Identities=14% Similarity=0.169 Sum_probs=51.6
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+|||+|+ |.+|+.+++.|.+.|++|.++..++........ -+ +..|..|.+.+.+.++++|+|+..
T Consensus 1 ~iliiG~-g~~g~~~~~a~~~~G~~v~~~~~~~~~~~~~~a--~~-~~~~~~d~~~l~~~~~~~d~v~~~ 66 (369)
T 3aw8_A 1 MIGILGG-GQLGRMLALAGYPLGLSFRFLDPSPEACAGQVG--EL-VVGEFLDEGALLRFAEGLALVTYE 66 (369)
T ss_dssp CEEEECC-SHHHHHHHHHHTTBTCCEEEEESCTTCGGGGTS--EE-EECCTTCHHHHHHHHTTCSEEEEC
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCChHHHhh--ce-EecCCCCHHHHHHHHhCCCEEEEC
Confidence 5899995 799999999999999999999865433212222 12 678999999999999999998754
|
| >3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.39 E-value=0.0061 Score=51.76 Aligned_cols=65 Identities=15% Similarity=0.132 Sum_probs=49.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
.+ +++|.|+ |..|+.++..|+..|. +|.+..|+++++..... ....+ ..+.+.++++++|.||++
T Consensus 108 ~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~-~~~~~-----~~~~~~~~~~~aDiVIna 173 (253)
T 3u62_A 108 KE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALDF-PVKIF-----SLDQLDEVVKKAKSLFNT 173 (253)
T ss_dssp CS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCS-SCEEE-----EGGGHHHHHHTCSEEEEC
T ss_pred CC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH-HcccC-----CHHHHHhhhcCCCEEEEC
Confidence 45 8999997 8999999999999998 89999999877654322 22222 224567788899999975
|
| >3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.38 E-value=0.0082 Score=53.01 Aligned_cols=70 Identities=13% Similarity=0.191 Sum_probs=48.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcccc--cccCCceEEEEccCCCH---HHHHHhh--cCccEEE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAM--ESFGTYVESMAGDASNK---KFLKTAL--RGVRSII 168 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~--~~~g~~vevV~GDl~D~---~sL~~AL--~GvDaVI 168 (198)
.++++|||+|| |-+|...+..+...|. +|.++++++++.. ..+|. .+++ |..+. +.+.++. +|+|.||
T Consensus 212 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa-~~vi--~~~~~~~~~~i~~~t~g~g~D~vi 287 (404)
T 3ip1_A 212 RPGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGA-DHVI--DPTKENFVEAVLDYTNGLGAKLFL 287 (404)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTC-SEEE--CTTTSCHHHHHHHHTTTCCCSEEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCC-CEEE--cCCCCCHHHHHHHHhCCCCCCEEE
Confidence 45779999998 9999999988888999 8998887776542 22342 1222 34332 3344444 3699999
Q ss_pred Ec
Q 029118 169 CP 170 (198)
Q Consensus 169 h~ 170 (198)
.+
T Consensus 288 d~ 289 (404)
T 3ip1_A 288 EA 289 (404)
T ss_dssp EC
T ss_pred EC
Confidence 88
|
| >1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.37 E-value=0.0036 Score=54.36 Aligned_cols=90 Identities=17% Similarity=0.145 Sum_probs=56.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHC-CCcEEEEEeCCccccc--ccCCceEEEEccCCCH--HHHHHhhc--CccEEEEc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAME--SFGTYVESMAGDASNK--KFLKTALR--GVRSIICP 170 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~-G~~VralvR~~~~a~~--~~g~~vevV~GDl~D~--~sL~~AL~--GvDaVIh~ 170 (198)
++++|||+|| |-+|...+..+... |.+|.++++++++... .++ .+.+ .|..+. +.+.+... |+|.||.+
T Consensus 186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~lG--a~~v-i~~~~~~~~~v~~~~~g~g~Dvvid~ 261 (359)
T 1h2b_A 186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLG--ADHV-VDARRDPVKQVMELTRGRGVNVAMDF 261 (359)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTT--CSEE-EETTSCHHHHHHHHTTTCCEEEEEES
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhC--CCEE-EeccchHHHHHHHHhCCCCCcEEEEC
Confidence 4679999999 89999999888888 9999999988765432 234 3222 245443 34444432 79999988
Q ss_pred C-hhH--HHHHHHhCCCCeEEEEc
Q 029118 171 S-EGF--ISNAGSLKGVQHVILLS 191 (198)
Q Consensus 171 a-~G~--lldAA~~~GVkRiV~vS 191 (198)
. ... .++.+.+..-.++|.++
T Consensus 262 ~G~~~~~~~~~~~~~~~G~~v~~g 285 (359)
T 1h2b_A 262 VGSQATVDYTPYLLGRMGRLIIVG 285 (359)
T ss_dssp SCCHHHHHHGGGGEEEEEEEEECC
T ss_pred CCCchHHHHHHHhhcCCCEEEEEe
Confidence 3 221 33333222223666654
|
| >2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A | Back alignment and structure |
|---|
Probab=96.35 E-value=0.0026 Score=52.38 Aligned_cols=64 Identities=9% Similarity=-0.022 Sum_probs=46.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCC-ceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~-~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+++|.|.| .|.+|+.+++.|...|++|.+..|++++....... ++.+ .. ++.++++++|.||.+
T Consensus 3 ~m~i~iiG-~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~----~~---~~~~~~~~~D~Vi~~ 67 (259)
T 2ahr_A 3 AMKIGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPY----AM---SHQDLIDQVDLVILG 67 (259)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCB----CS---SHHHHHHTCSEEEEC
T ss_pred ccEEEEEC-CCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEe----eC---CHHHHHhcCCEEEEE
Confidence 46899999 79999999999999999999998887654322100 1221 22 345667789999987
|
| >3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* | Back alignment and structure |
|---|
Probab=96.34 E-value=0.003 Score=54.12 Aligned_cols=70 Identities=14% Similarity=0.251 Sum_probs=48.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc--ccCCceEEEEccCCCHH---HHHHhhcCccEEEEc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASNKK---FLKTALRGVRSIICP 170 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~--~~g~~vevV~GDl~D~~---sL~~AL~GvDaVIh~ 170 (198)
.++++|||+|| |-+|...+..+...|.+|.++++++++... .++ .+.+ .|..+.+ .+.+...++|.||.+
T Consensus 165 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lG--a~~~-i~~~~~~~~~~~~~~~g~~d~vid~ 239 (340)
T 3s2e_A 165 RPGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLG--AEVA-VNARDTDPAAWLQKEIGGAHGVLVT 239 (340)
T ss_dssp CTTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT--CSEE-EETTTSCHHHHHHHHHSSEEEEEES
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcC--CCEE-EeCCCcCHHHHHHHhCCCCCEEEEe
Confidence 46789999997 889999999888899999999988765432 234 2222 2444332 333333488999987
|
| >1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=96.34 E-value=0.0032 Score=52.42 Aligned_cols=63 Identities=8% Similarity=-0.095 Sum_probs=44.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+++|.|.| .|.+|+.+++.|...|++|.+.. ++++.......++.+ ..++.++++++|.||.+
T Consensus 3 ~m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~~g~~~-------~~~~~~~~~~~D~vi~~ 65 (295)
T 1yb4_A 3 AMKLGFIG-LGIMGSPMAINLARAGHQLHVTT-IGPVADELLSLGAVN-------VETARQVTEFADIIFIM 65 (295)
T ss_dssp -CEEEECC-CSTTHHHHHHHHHHTTCEEEECC-SSCCCHHHHTTTCBC-------CSSHHHHHHTCSEEEEC
T ss_pred CCEEEEEc-cCHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHHcCCcc-------cCCHHHHHhcCCEEEEE
Confidence 46899998 69999999999999999999887 665543322222221 12345667788988877
|
| >3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406} | Back alignment and structure |
|---|
Probab=96.31 E-value=0.019 Score=43.90 Aligned_cols=77 Identities=10% Similarity=0.056 Sum_probs=47.4
Q ss_pred CCeEEEEcCC---ChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc-C-hh
Q 029118 99 RDAVLVTDGD---SDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-S-EG 173 (198)
Q Consensus 99 ~~~ILVTGAT---GfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~-a-~G 173 (198)
.++|+|.||| +..|..+++.|++.|++|..+ ||... +.+| .. ..-++.|- -. +|.++.+ . ..
T Consensus 4 p~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pV--nP~~~-~i~G--~~-~y~sl~dl------p~-vDlavi~~p~~~ 70 (122)
T 3ff4_A 4 MKKTLILGATPETNRYAYLAAERLKSHGHEFIPV--GRKKG-EVLG--KT-IINERPVI------EG-VDTVTLYINPQN 70 (122)
T ss_dssp CCCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEE--SSSCS-EETT--EE-CBCSCCCC------TT-CCEEEECSCHHH
T ss_pred CCEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEE--CCCCC-cCCC--ee-ccCChHHC------CC-CCEEEEEeCHHH
Confidence 4689999998 679999999999999988776 55422 2233 11 22233331 23 6666655 1 11
Q ss_pred --HHHHHHHhCCCCeEE
Q 029118 174 --FISNAGSLKGVQHVI 188 (198)
Q Consensus 174 --~lldAA~~~GVkRiV 188 (198)
.+++.|.+.|++.++
T Consensus 71 v~~~v~e~~~~g~k~v~ 87 (122)
T 3ff4_A 71 QLSEYNYILSLKPKRVI 87 (122)
T ss_dssp HGGGHHHHHHHCCSEEE
T ss_pred HHHHHHHHHhcCCCEEE
Confidence 155666666776544
|
| >1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A | Back alignment and structure |
|---|
Probab=96.28 E-value=0.026 Score=47.46 Aligned_cols=95 Identities=14% Similarity=0.077 Sum_probs=61.8
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCC-------------------cccc------cccCCceE--EE
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK-------------------RNAM------ESFGTYVE--SM 147 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~-------------------~~a~------~~~g~~ve--vV 147 (198)
.....+|+|.|+.| +|+++++.|...|. +++++.++. .++. ....+.++ .+
T Consensus 25 ~l~~~~VlvvG~Gg-lG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~ 103 (251)
T 1zud_1 25 KLLDSQVLIIGLGG-LGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTAL 103 (251)
T ss_dssp HHHTCEEEEECCST-THHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred HHhcCcEEEEccCH-HHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEE
Confidence 45677999999855 99999999999997 556654432 1110 01123444 44
Q ss_pred EccCCCHHHHHHhhcCccEEEEcC--h---hHHHHHHHhCCCCeEEEEccc
Q 029118 148 AGDASNKKFLKTALRGVRSIICPS--E---GFISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 148 ~GDl~D~~sL~~AL~GvDaVIh~a--~---G~lldAA~~~GVkRiV~vSS~ 193 (198)
..++ +.+.+.+.++++|.||.+. . ..+.++|++.++. +|+.+..
T Consensus 104 ~~~~-~~~~~~~~~~~~DvVi~~~d~~~~r~~l~~~~~~~~~p-~i~~~~~ 152 (251)
T 1zud_1 104 QQRL-TGEALKDAVARADVVLDCTDNMATRQEINAACVALNTP-LITASAV 152 (251)
T ss_dssp CSCC-CHHHHHHHHHHCSEEEECCSSHHHHHHHHHHHHHTTCC-EEEEEEE
T ss_pred eccC-CHHHHHHHHhcCCEEEECCCCHHHHHHHHHHHHHhCCC-EEEEecc
Confidence 4444 3467788889999999872 1 1267778888765 5555443
|
| >3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans} | Back alignment and structure |
|---|
Probab=96.27 E-value=0.0022 Score=58.04 Aligned_cols=87 Identities=16% Similarity=0.118 Sum_probs=49.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC-CcEEEEEeCCccc----ccccC-----------CceEEEEccCCCHHHHHHhhc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNA----MESFG-----------TYVESMAGDASNKKFLKTALR 162 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G-~~VralvR~~~~a----~~~~g-----------~~vevV~GDl~D~~sL~~AL~ 162 (198)
+.+|.|.||||++|+.+++.|.++- .++..+.-+.+.+ ....+ ....+...|.. ..+.
T Consensus 19 ~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~aS~~saGk~~~~~~~~~~~~~~p~~~~~~~v~~~~~~------~~~~ 92 (381)
T 3hsk_A 19 VKKAGVLGATGSVGQRFILLLSKHPEFEIHALGASSRSAGKKYKDAASWKQTETLPETEQDIVVQECKPE------GNFL 92 (381)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHCCCCCSSCCCHHHHTCBCEESSSC------TTGG
T ss_pred ccEEEEECCCChHHHHHHHHHHcCCCceEEEeeccccccCCCHHHhcccccccccccccccceEEeCchh------hhcc
Confidence 4579999999999999999775542 3565553222211 11110 01122211211 1367
Q ss_pred CccEEEEcC-hhH---HHHHHHhCCCCeEEEEcc
Q 029118 163 GVRSIICPS-EGF---ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 163 GvDaVIh~a-~G~---lldAA~~~GVkRiV~vSS 192 (198)
+||.||.+. .+. +...+.++|++ +|=+|+
T Consensus 93 ~~Dvvf~alp~~~s~~~~~~~~~~G~~-VIDlSa 125 (381)
T 3hsk_A 93 ECDVVFSGLDADVAGDIEKSFVEAGLA-VVSNAK 125 (381)
T ss_dssp GCSEEEECCCHHHHHHHHHHHHHTTCE-EEECCS
T ss_pred cCCEEEECCChhHHHHHHHHHHhCCCE-EEEcCC
Confidence 999999883 332 66666778875 555554
|
| >3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=96.26 E-value=0.0061 Score=51.79 Aligned_cols=64 Identities=9% Similarity=0.081 Sum_probs=48.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC---cEEEEEeCCcccccccCC-ceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRT---RIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~---~VralvR~~~~a~~~~g~-~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+++|.|.|+ |.+|+.+++.|+.+|+ +|.+..|++++....... ++++. .+..++++++|.||.+
T Consensus 3 ~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~-------~~~~~~~~~aDvVila 70 (280)
T 3tri_A 3 TSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTT-------QDNRQGALNADVVVLA 70 (280)
T ss_dssp CSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEE-------SCHHHHHSSCSEEEEC
T ss_pred CCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEe-------CChHHHHhcCCeEEEE
Confidence 467999988 9999999999999999 999999998765433211 34432 1345678999999987
|
| >2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A* | Back alignment and structure |
|---|
Probab=96.26 E-value=0.0016 Score=54.03 Aligned_cols=61 Identities=11% Similarity=0.004 Sum_probs=43.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
++|.|.| .|.+|+.+++.|.. |++|.+..|++++.......++... + +.++++++|.||.+
T Consensus 2 ~~i~iiG-~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~g~~~~--~------~~~~~~~~D~vi~~ 62 (289)
T 2cvz_A 2 EKVAFIG-LGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEEFGSEA--V------PLERVAEARVIFTC 62 (289)
T ss_dssp CCEEEEC-CSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHHHCCEE--C------CGGGGGGCSEEEEC
T ss_pred CeEEEEc-ccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHCCCccc--C------HHHHHhCCCEEEEe
Confidence 5799997 49999999999999 9999999998866432211122221 1 34567788988877
|
| >1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* | Back alignment and structure |
|---|
Probab=96.26 E-value=0.0096 Score=52.11 Aligned_cols=66 Identities=18% Similarity=0.122 Sum_probs=47.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcccccc----------cCCceEEEEccCCCHHHHHHhhcCccEE
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMES----------FGTYVESMAGDASNKKFLKTALRGVRSI 167 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~~~----------~g~~vevV~GDl~D~~sL~~AL~GvDaV 167 (198)
+++|.|+|| |.+|..++..|..+|+ +|+.+.++++++... ......+.. ...++++++++|.|
T Consensus 9 ~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-----t~d~~ea~~~aDiV 82 (331)
T 1pzg_A 9 RKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-----EYSYEAALTGADCV 82 (331)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-----ECSHHHHHTTCSEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE-----eCCHHHHhCCCCEE
Confidence 468999998 9999999999999998 999998887654320 111111111 02346689999999
Q ss_pred EEc
Q 029118 168 ICP 170 (198)
Q Consensus 168 Ih~ 170 (198)
|.+
T Consensus 83 i~a 85 (331)
T 1pzg_A 83 IVT 85 (331)
T ss_dssp EEC
T ss_pred EEc
Confidence 987
|
| >1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.23 E-value=0.0042 Score=54.28 Aligned_cols=67 Identities=9% Similarity=0.015 Sum_probs=48.9
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc-ccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-MESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a-~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
.....++|.|.| .|.+|+.+++.|...|++|.+..|+++.. ......++++. ++.++++++|.||.+
T Consensus 12 ~~l~~~~I~IIG-~G~mG~alA~~L~~~G~~V~~~~~~~~~~~~~a~~~G~~~~--------~~~e~~~~aDvVila 79 (338)
T 1np3_A 12 SIIQGKKVAIIG-YGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVA--------DVKTAVAAADVVMIL 79 (338)
T ss_dssp HHHHTSCEEEEC-CSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEE--------CHHHHHHTCSEEEEC
T ss_pred chhcCCEEEEEC-chHHHHHHHHHHHHCcCEEEEEECChHHHHHHHHHCCCEEc--------cHHHHHhcCCEEEEe
Confidence 345567899998 59999999999999999999998887542 11111234332 245678899999987
|
| >3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium} | Back alignment and structure |
|---|
Probab=96.22 E-value=0.01 Score=49.95 Aligned_cols=70 Identities=16% Similarity=0.135 Sum_probs=53.9
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc-cc-cCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-ES-FGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~-~~-~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
-+..+++|||.|| |.+|...++.|++.|.+|+++..+..+.. .. ....++++..++.+ .-+.++|.||.+
T Consensus 27 l~L~gk~VLVVGg-G~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~~~~~~-----~dL~~adLVIaA 98 (223)
T 3dfz_A 27 LDLKGRSVLVVGG-GTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKRKKVGE-----EDLLNVFFIVVA 98 (223)
T ss_dssp ECCTTCCEEEECC-SHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEECSCCCG-----GGSSSCSEEEEC
T ss_pred EEcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEECCCCH-----hHhCCCCEEEEC
Confidence 3778889999996 89999999999999999999986654321 11 12458888888764 237899999977
|
| >2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A | Back alignment and structure |
|---|
Probab=96.21 E-value=0.0025 Score=54.01 Aligned_cols=66 Identities=15% Similarity=0.196 Sum_probs=47.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCC-ceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~-~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
...++|+|.|+ |.+|+.+++.|.+.|++|.+..|+++++...... ++++ .+ .+.++++++|.||.+
T Consensus 127 ~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g~~~--~~-----~~~~~~~~aDiVi~a 193 (275)
T 2hk9_A 127 VKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPLEV--VN-----SPEEVIDKVQVIVNT 193 (275)
T ss_dssp GGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSCEEE--CS-----CGGGTGGGCSEEEEC
T ss_pred cCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcCCee--eh-----hHHhhhcCCCEEEEe
Confidence 34678999996 8999999999999999999988887655432211 2332 11 345577889999876
|
| >4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=96.18 E-value=0.0071 Score=53.73 Aligned_cols=67 Identities=7% Similarity=-0.093 Sum_probs=46.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
.++|.|.| .|.+|..+++.|+++|++|.+..|++++.......++.. ..+++.+.+.+...|.||.+
T Consensus 22 ~mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~----~~s~~e~~~~a~~~DvVi~~ 88 (358)
T 4e21_A 22 SMQIGMIG-LGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAG----ARSIEEFCAKLVKPRVVWLM 88 (358)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBC----CSSHHHHHHHSCSSCEEEEC
T ss_pred CCEEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEE----eCCHHHHHhcCCCCCEEEEe
Confidence 36899998 799999999999999999999999887654433222321 23443333333333888876
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 198 | |||
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.88 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.8 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 99.79 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.78 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.77 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 99.76 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.74 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.74 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 99.72 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 99.72 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.72 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.7 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 99.7 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 99.69 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.69 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.69 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.68 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.68 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 99.66 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 99.65 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 99.65 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.65 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 99.64 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 99.64 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 99.63 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 99.61 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.54 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.47 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 99.37 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 99.17 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 99.15 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 99.13 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.13 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 99.13 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 99.13 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 99.12 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 99.12 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 99.12 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 99.11 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 99.09 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 99.08 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 99.08 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 99.06 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 99.06 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 99.06 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.06 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 99.05 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 99.05 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 99.04 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 99.04 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 99.03 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 99.03 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.02 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 99.01 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 99.01 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 99.0 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 99.0 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 98.99 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 98.98 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 98.97 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 98.97 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 98.97 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 98.94 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 98.93 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 98.92 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 98.92 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 98.9 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 98.89 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 98.88 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 98.88 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 98.84 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 98.84 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 98.81 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 98.81 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 98.81 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 98.81 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 98.8 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 98.75 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 98.73 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 98.72 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 98.72 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 98.68 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 98.61 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 98.61 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 98.6 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 98.57 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 98.55 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 98.55 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 98.51 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 98.5 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 98.35 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 98.28 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 98.28 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 98.22 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 98.19 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 98.14 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 98.06 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 98.03 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 97.97 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 97.89 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 97.89 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 97.86 | |
| d1mb4a1 | 147 | Aspartate beta-semialdehyde dehydrogenase {Vibrio | 97.83 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 97.83 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 97.82 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 97.79 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 97.72 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 97.68 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 97.63 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 97.59 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 97.54 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 97.52 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 97.51 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 97.46 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 97.42 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 97.32 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 97.29 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 97.28 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 97.14 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 97.14 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 97.14 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 97.08 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 97.07 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 97.06 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 97.05 | |
| d2g17a1 | 179 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 96.99 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 96.98 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 96.95 | |
| d1vkna1 | 176 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 96.91 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 96.89 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 96.86 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 96.83 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 96.8 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 96.79 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 96.77 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 96.72 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 96.71 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 96.65 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 96.54 | |
| d2csua1 | 129 | Acetate-CoA ligase alpha chain, AcdA, N-terminal d | 96.53 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 96.53 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 96.49 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 96.39 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 96.38 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 96.34 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 96.33 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 96.32 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 96.19 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 96.19 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 96.14 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 96.13 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 96.12 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 96.08 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 96.07 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 96.04 | |
| d2cvoa1 | 183 | Putative semialdehyde dehydrogenase {Rice (Oryza s | 96.04 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 96.04 | |
| d2d59a1 | 139 | Hypothetical protein PH1109 {Pyrococcus horikoshii | 95.97 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 95.85 | |
| d1y81a1 | 116 | Hypothetical protein PF0725 {Pyrococcus furiosus [ | 95.85 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 95.83 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 95.81 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 95.8 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 95.79 | |
| d2nu7a1 | 119 | Succinyl-CoA synthetase, alpha-chain, N-terminal ( | 95.79 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 95.75 | |
| d1diha1 | 162 | Dihydrodipicolinate reductase {Escherichia coli [T | 95.74 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 95.71 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 95.65 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 95.63 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 95.62 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 95.62 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 95.56 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 95.51 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 95.29 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 95.25 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 95.2 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 95.1 | |
| d1euca1 | 130 | Succinyl-CoA synthetase, alpha-chain, N-terminal ( | 95.07 | |
| d1f06a1 | 170 | Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb | 95.03 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 94.97 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 94.96 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 94.7 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 94.59 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 94.56 | |
| d1oi7a1 | 121 | Succinyl-CoA synthetase, alpha-chain, N-terminal ( | 94.46 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 94.45 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 93.94 | |
| d1tlta1 | 164 | Virulence factor MviM {Escherichia coli [TaxId: 56 | 93.73 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 93.65 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 93.63 | |
| d2ivda1 | 347 | Protoporphyrinogen oxidase {Myxococcus xanthus [Ta | 93.62 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 93.6 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 93.46 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 93.44 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 93.41 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 93.33 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 93.09 | |
| d1obba1 | 171 | Alpha-glucosidase AglA {Thermotoga maritima [TaxId | 93.03 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 93.01 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 92.93 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 92.92 | |
| d1b7go1 | 178 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 92.77 | |
| d1l7da1 | 183 | Nicotinamide nucleotide transhydrogenase dI compon | 92.76 | |
| d1iuka_ | 136 | Hypothetical protein TT1466 {Thermus thermophilus | 92.59 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 92.29 | |
| d2dt5a2 | 126 | Transcriptional repressor Rex, C-terminal domain { | 92.18 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 92.13 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 92.01 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 91.9 | |
| d2vapa1 | 209 | Cell-division protein FtsZ {Archaeon Methanococcus | 91.9 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 91.69 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 91.69 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 91.57 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 91.33 | |
| d1c1da1 | 201 | Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ | 91.08 | |
| d2i76a2 | 153 | Hypothetical protein TM1727 {Thermotoga maritima [ | 90.97 | |
| d1nvmb1 | 157 | Acetaldehyde dehydrogenase (acylating) {Pseudomona | 90.97 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 90.83 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 90.79 | |
| d3etja2 | 78 | N5-carboxyaminoimidazole ribonucleotide synthetase | 90.52 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 90.52 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 90.31 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 90.28 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 90.19 | |
| d2bcgg1 | 297 | Guanine nucleotide dissociation inhibitor, GDI {Ba | 90.05 | |
| d1cf2o1 | 171 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 89.98 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 89.77 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 89.76 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 89.58 | |
| d2czca2 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 89.55 | |
| d1djqa2 | 156 | Trimethylamine dehydrogenase, C-terminal domain {M | 89.54 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 89.53 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 89.35 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 89.35 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 89.13 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 89.06 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 89.01 | |
| d1seza1 | 373 | Protoporphyrinogen oxidase {Tobacco (Nicotiana tab | 88.78 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 88.64 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 88.57 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 88.49 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 88.37 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 88.04 | |
| d1dlja2 | 196 | UDP-glucose dehydrogenase (UDPGDH) {Streptococcus | 87.86 | |
| d2bi7a1 | 314 | UDP-galactopyranose mutase, N-terminal domain {Kle | 87.37 | |
| d2dw4a2 | 449 | Lysine-specific histone demethylase 1, LSD1 {Human | 87.36 | |
| d2gv8a2 | 107 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 87.11 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 86.89 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 86.79 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 86.69 | |
| d1djqa3 | 233 | Trimethylamine dehydrogenase, middle domain {Methy | 86.3 | |
| d1uwva2 | 358 | rRNA (Uracil-5-)-methyltransferase RumA, catalytic | 86.25 | |
| d1q1ra1 | 185 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 86.14 | |
| d1b5qa1 | 347 | Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | 86.12 | |
| d1wbha1 | 213 | KDPG aldolase {Escherichia coli [TaxId: 562]} | 85.95 | |
| d1ydwa1 | 184 | Probable oxidoreductase At4g09670 {Thale cress (Ar | 85.9 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 85.76 | |
| d1nvta1 | 177 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 85.64 | |
| d1v8ba1 | 163 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 85.4 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 85.29 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 84.74 | |
| d1a9xa4 | 121 | Carbamoyl phosphate synthetase (CPS), large subuni | 84.43 | |
| d1j5pa4 | 132 | Hypothetical protein TM1643 {Thermotoga maritima [ | 84.28 | |
| d1wa3a1 | 202 | KDPG aldolase {Thermotoga maritima [TaxId: 2336]} | 84.14 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 82.75 | |
| d1bgva1 | 255 | Glutamate dehydrogenase {Clostridium symbiosum [Ta | 82.57 | |
| d2gf3a1 | 281 | Sarcosine oxidase {Bacillus sp., strain b0618 [Tax | 82.48 | |
| d2gv8a1 | 335 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 82.45 | |
| d1mxsa_ | 216 | KDPG aldolase {Pseudomonas putida [TaxId: 303]} | 82.39 | |
| d1edza1 | 171 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 82.3 | |
| d1up7a1 | 162 | 6-phospho-beta-glucosidase {Thermotoga maritima [T | 81.98 | |
| d1yovb1 | 426 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 81.83 | |
| d1aoga2 | 117 | Trypanothione reductase {Trypanosoma cruzi [TaxId: | 81.69 | |
| d2g82a1 | 168 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 81.59 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 81.56 | |
| d1v9la1 | 242 | Glutamate dehydrogenase {Pyrobaculum islandicum [T | 81.42 | |
| d1pj5a2 | 305 | N,N-dimethylglycine oxidase {Arthrobacter globifor | 81.18 | |
| d2h1qa1 | 251 | Hypothetical protein Dhaf_3308 {Desulfitobacterium | 81.06 | |
| d1dssg1 | 169 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 81.03 | |
| d1i8ta1 | 298 | UDP-galactopyranose mutase, N-terminal domain {Esc | 80.6 | |
| d1kifa1 | 246 | D-aminoacid oxidase, N-terminal domain {Pig (Sus s | 80.46 | |
| d1d7ya1 | 183 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 80.39 |
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.88 E-value=9.9e-23 Score=163.38 Aligned_cols=100 Identities=16% Similarity=0.198 Sum_probs=89.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC------
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS------ 171 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a------ 171 (198)
.+++|+||||||+||++++++|+++||+|++++|++++.......+++++.||++|++++.++++|+|+|||+.
T Consensus 2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~gD~~d~~~l~~al~~~d~vi~~~g~~~~~ 81 (205)
T d1hdoa_ 2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRNDL 81 (205)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccccccccccccccccchhhHHHHhcCCCEEEEEeccCCch
Confidence 46899999999999999999999999999999999988766666789999999999999999999999999971
Q ss_pred -------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 172 -------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 -------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.++ ++++|+++|++|||++||.++|.
T Consensus 82 ~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~ 116 (205)
T d1hdoa_ 82 SPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLW 116 (205)
T ss_dssp SCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS
T ss_pred hhhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccC
Confidence 122 89999999999999999987753
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=99.80 E-value=1.1e-19 Score=154.20 Aligned_cols=98 Identities=21% Similarity=0.233 Sum_probs=83.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc-------ccccCCceEEEEccCCCHHHHHHhhc--CccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-------MESFGTYVESMAGDASNKKFLKTALR--GVRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a-------~~~~g~~vevV~GDl~D~~sL~~AL~--GvDaVIh~ 170 (198)
|+|||||||||||++|+++|+++||+|++++|-.... ......+++++++|++|.+.+.++++ ++|+|||+
T Consensus 1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViHl 80 (338)
T d1udca_ 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF 80 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEEC
Confidence 6799999999999999999999999999998733221 11234579999999999999999998 89999998
Q ss_pred C--------------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 171 S--------------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 171 a--------------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
+ .|+ ++++|++.+++||||+||.+||.
T Consensus 81 Aa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~ 129 (338)
T d1udca_ 81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYG 129 (338)
T ss_dssp CSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGC
T ss_pred CCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEc
Confidence 3 122 89999999999999999999985
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.79 E-value=4e-19 Score=151.21 Aligned_cols=106 Identities=14% Similarity=0.050 Sum_probs=88.1
Q ss_pred CCccccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 91 EDEFPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 91 ~~~~~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
|.-|.. ..|+|||||||||||++|+++|+++||+|+++.|.............++..+|++|.+.+.++++++|+|||+
T Consensus 8 ~~~~~~-~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~Vih~ 86 (363)
T d2c5aa1 8 EQYWPS-ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNL 86 (363)
T ss_dssp CCSCTT-SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEEC
T ss_pred cCcCCC-CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhhhcccCcEEEeechhHHHHHHHhhcCCeEeec
Confidence 555655 5667999999999999999999999999999987554322222345789999999999999999999999997
Q ss_pred C---------------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 171 S---------------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 171 a---------------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
+ .++ ++++|++++++||||+||..+|+
T Consensus 87 a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~ 136 (363)
T d2c5aa1 87 AADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYP 136 (363)
T ss_dssp CCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSC
T ss_pred ccccccccccccccccccccccchhhHHHHhHHhhCcccccccccccccc
Confidence 2 122 78999999999999999998875
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.78 E-value=2.1e-19 Score=152.68 Aligned_cols=98 Identities=18% Similarity=0.144 Sum_probs=82.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc-------ccccCCceEEEEccCCCHHHHHHhhc--CccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-------MESFGTYVESMAGDASNKKFLKTALR--GVRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a-------~~~~g~~vevV~GDl~D~~sL~~AL~--GvDaVIh~ 170 (198)
|+|||||||||||++|+++|+++||+|+++.|..... ......+++++.+|++|++.+..+++ ++|+|||+
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vihl 81 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHF 81 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEEc
Confidence 5899999999999999999999999999997633211 12234679999999999999999887 88999998
Q ss_pred C--------------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 171 S--------------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 171 a--------------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
+ .|+ ++++|++.+++||||+||..||+
T Consensus 82 Aa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg 130 (347)
T d1z45a2 82 AGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYG 130 (347)
T ss_dssp CSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGC
T ss_pred cccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeec
Confidence 2 112 78999999999999999999985
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.77 E-value=6.7e-19 Score=143.49 Aligned_cols=100 Identities=14% Similarity=0.163 Sum_probs=86.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC--cEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC----
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS---- 171 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~--~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a---- 171 (198)
.+++|||||||||||++|+++|+++|. +|++++|++.+........+++..+|+.+.+.+.++++|+|+|||++
T Consensus 13 ~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~i~~~~~D~~~~~~~~~~~~~~d~vi~~~~~~~ 92 (232)
T d2bkaa1 13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTTR 92 (232)
T ss_dssp TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCCCH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccceeeeeeecccccccccccccccccccccccccc
Confidence 456899999999999999999999994 89999998866544445679999999999999999999999999982
Q ss_pred -------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 172 -------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 -------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.++ ++++|++.++++|||+|+.++|.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~ 133 (232)
T d2bkaa1 93 GKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADK 133 (232)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCT
T ss_pred cccchhhhhhhcccccceeeecccccCccccccCCcccccc
Confidence 111 78999999999999999998875
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=99.76 E-value=7.2e-19 Score=151.09 Aligned_cols=98 Identities=16% Similarity=0.160 Sum_probs=79.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc-----cc------cccCCceEEEEccCCCHHHHHHhhcCc--cE
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AM------ESFGTYVESMAGDASNKKFLKTALRGV--RS 166 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~-----a~------~~~g~~vevV~GDl~D~~sL~~AL~Gv--Da 166 (198)
+.+||||||||||++|+++|+++||+|++++|.+.. .. ....++++++++|++|.+.+.++++++ |+
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDE 81 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCE
Confidence 678999999999999999999999999999985431 11 112357999999999999999999977 99
Q ss_pred EEEcC--------------------hhH--HHHHHHhCCCC---eEEEEcccceec
Q 029118 167 IICPS--------------------EGF--ISNAGSLKGVQ---HVILLSQGAVVC 197 (198)
Q Consensus 167 VIh~a--------------------~G~--lldAA~~~GVk---RiV~vSS~~Vy~ 197 (198)
|||++ .|+ ++++|++.+++ ||||+||.+||+
T Consensus 82 v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG 137 (357)
T d1db3a_ 82 VYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYG 137 (357)
T ss_dssp EEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGT
T ss_pred EEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhC
Confidence 99982 123 78999987765 799999999985
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.74 E-value=1.7e-18 Score=147.29 Aligned_cols=99 Identities=14% Similarity=0.216 Sum_probs=81.8
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc--------ccCCceEEEEccCCCHHHHHHhhcCccEEE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--------SFGTYVESMAGDASNKKFLKTALRGVRSII 168 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~--------~~g~~vevV~GDl~D~~sL~~AL~GvDaVI 168 (198)
.++++|||||||||||++|+++|+++||+|++++|+.++... ........+.+|+.|.+.+.+++.++|+|+
T Consensus 9 ~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~v~ 88 (342)
T d1y1pa1 9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVA 88 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEE
T ss_pred CCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccchhhh
Confidence 447899999999999999999999999999999998754321 112335668899999999999999999999
Q ss_pred EcC-----------------hhH--HHHHHHhC-CCCeEEEEcccce
Q 029118 169 CPS-----------------EGF--ISNAGSLK-GVQHVILLSQGAV 195 (198)
Q Consensus 169 h~a-----------------~G~--lldAA~~~-GVkRiV~vSS~~V 195 (198)
|++ .|+ ++++|++. ++++|||+||.++
T Consensus 89 ~~a~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~ 135 (342)
T d1y1pa1 89 HIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVS 135 (342)
T ss_dssp ECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGG
T ss_pred hhcccccccccccccccchhhhHHHHHHhhhccccccccccccccee
Confidence 972 133 78888775 7999999999764
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.74 E-value=3.1e-18 Score=141.59 Aligned_cols=96 Identities=17% Similarity=0.068 Sum_probs=78.0
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCC--cccc----cccCCceEEEEccCCCHHHHHHhhcCc--cEEEEcC-
Q 029118 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK--RNAM----ESFGTYVESMAGDASNKKFLKTALRGV--RSIICPS- 171 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~--~~a~----~~~g~~vevV~GDl~D~~sL~~AL~Gv--DaVIh~a- 171 (198)
+|||||||||||+||+++|+++||+|++++|-. .... .....+++++.+|++|++.+.++++++ |+|||++
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~aa 81 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAG 81 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEeecc
Confidence 799999999999999999999999999987422 1111 112357999999999999999999887 9999982
Q ss_pred -------------------hhH--HHHHHHhCCCCeEEEEccccee
Q 029118 172 -------------------EGF--ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 172 -------------------~G~--lldAA~~~GVkRiV~vSS~~Vy 196 (198)
.|+ ++++|.+.+++++|+.||.+++
T Consensus 82 ~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~ 127 (338)
T d1orra_ 82 QVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKV 127 (338)
T ss_dssp CCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGG
T ss_pred cccccccccChHHHHHHHHHHHHHHHHhhhcccccccccccccccc
Confidence 123 7899999999998888886553
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.72 E-value=9.1e-18 Score=140.93 Aligned_cols=98 Identities=15% Similarity=0.132 Sum_probs=77.9
Q ss_pred CeE-EEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc-----c-------cccCCceEEEEccCCCHHHHHHhhcC--c
Q 029118 100 DAV-LVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-----M-------ESFGTYVESMAGDASNKKFLKTALRG--V 164 (198)
Q Consensus 100 ~~I-LVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a-----~-------~~~g~~vevV~GDl~D~~sL~~AL~G--v 164 (198)
++| ||||||||||+|++++|+++||+|++++|.+... . .....+++++.+|++|++.+..++.+ +
T Consensus 1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 80 (347)
T d1t2aa_ 1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP 80 (347)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhccc
Confidence 467 9999999999999999999999999999965421 1 11124689999999999999999965 4
Q ss_pred cEEEEc-C-------------------hhH--HHHHHHhCCCC---eEEEEcccceec
Q 029118 165 RSIICP-S-------------------EGF--ISNAGSLKGVQ---HVILLSQGAVVC 197 (198)
Q Consensus 165 DaVIh~-a-------------------~G~--lldAA~~~GVk---RiV~vSS~~Vy~ 197 (198)
+.|+|+ + .|+ ++++|+++++. ||||+||.+||+
T Consensus 81 ~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg 138 (347)
T d1t2aa_ 81 TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYG 138 (347)
T ss_dssp SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTC
T ss_pred ceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheec
Confidence 677776 1 122 78999988774 899999999985
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=99.72 E-value=1.2e-17 Score=141.53 Aligned_cols=98 Identities=13% Similarity=0.136 Sum_probs=82.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc---ccCCceEEEEccCCCH-HHHHHhhcCccEEEEcC--
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNK-KFLKTALRGVRSIICPS-- 171 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~---~~g~~vevV~GDl~D~-~sL~~AL~GvDaVIh~a-- 171 (198)
.+++|||||||||||++|+++|+++||+|++++|++++... ...++++++++|+.|+ +.++.++.+++++++..
T Consensus 2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~~~~~ 81 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTS 81 (350)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCS
T ss_pred CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhhcccCCCEEEEeeCCCcHHHHHHHhcCCceEEeeccc
Confidence 57899999999999999999999999999999999876431 1235799999999985 55788999999998761
Q ss_pred ------hh--HHHHHHHhCCCCeEEEEcccce
Q 029118 172 ------EG--FISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 172 ------~G--~lldAA~~~GVkRiV~vSS~~V 195 (198)
.. .++++|+++|++|+|+.||...
T Consensus 82 ~~~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~ 113 (350)
T d1xgka_ 82 QAGDEIAIGKDLADAAKRAGTIQHYIYSSMPD 113 (350)
T ss_dssp TTSCHHHHHHHHHHHHHHHSCCSEEEEEECCC
T ss_pred ccchhhhhhhHHHHHHHHhCCCceEEEeeccc
Confidence 11 2899999999999999998654
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.72 E-value=1.5e-17 Score=135.23 Aligned_cols=99 Identities=16% Similarity=0.089 Sum_probs=83.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc--------cccCCceEEEEccCCCHHHHHHhhcCccEEEE
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM--------ESFGTYVESMAGDASNKKFLKTALRGVRSIIC 169 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~--------~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh 169 (198)
.+++|||||||||||++|+++|+++||+|++++|++.... .....+++++.+|++|++.+.+++++++++|+
T Consensus 2 ~k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~~ 81 (312)
T d1qyda_ 2 KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVIS 81 (312)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhhh
Confidence 4678999999999999999999999999999999865421 11246799999999999999999999999998
Q ss_pred cC---------hh--HHHHHHHhCCCCeEEEEccccee
Q 029118 170 PS---------EG--FISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 170 ~a---------~G--~lldAA~~~GVkRiV~vSS~~Vy 196 (198)
+. .+ .++++|.+++..++|+.||.+++
T Consensus 82 ~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~ 119 (312)
T d1qyda_ 82 ALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMD 119 (312)
T ss_dssp CCCCSSSSTTTTTHHHHHHHHHHSCCCSEEECSCCSSC
T ss_pred hhhhcccccchhhhhHHHHHHHHhcCCcEEEEeecccc
Confidence 71 12 27889999999999999988765
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.70 E-value=3.5e-17 Score=131.35 Aligned_cols=98 Identities=17% Similarity=0.139 Sum_probs=84.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc---------cccCCceEEEEccCCCHHHHHHhhcCccEEE
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---------ESFGTYVESMAGDASNKKFLKTALRGVRSII 168 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~---------~~~g~~vevV~GDl~D~~sL~~AL~GvDaVI 168 (198)
.+++|||||||||||++++++|+++||+|++++|++.... .....+++++.+|+.+...+.+++++++.||
T Consensus 2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~vi 81 (307)
T d1qyca_ 2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVI 81 (307)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhceeee
Confidence 5789999999999999999999999999999999875431 1123568999999999999999999999999
Q ss_pred EcC-----hh--HHHHHHHhCCCCeEEEEcccce
Q 029118 169 CPS-----EG--FISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 169 h~a-----~G--~lldAA~~~GVkRiV~vSS~~V 195 (198)
|+. .+ .++++++.++++++++.|+.+.
T Consensus 82 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~s~~~~ 115 (307)
T d1qyca_ 82 STVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGN 115 (307)
T ss_dssp ECCCGGGSGGGHHHHHHHHHHCCCSEEECSCCSS
T ss_pred ecccccccchhhHHHHHHHHhccccceeeecccc
Confidence 982 22 3889999999999999998754
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.70 E-value=5.3e-17 Score=137.07 Aligned_cols=101 Identities=18% Similarity=0.160 Sum_probs=84.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc-----------cccCCceEEEEccCCCHHHHHHhhcCcc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-----------ESFGTYVESMAGDASNKKFLKTALRGVR 165 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~-----------~~~g~~vevV~GDl~D~~sL~~AL~GvD 165 (198)
...++|||||||||||++|+++|+++||+|++++|...... ......++++.+|+.|...+.....+.+
T Consensus 14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~~ 93 (341)
T d1sb8a_ 14 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVD 93 (341)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCS
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccccccc
Confidence 34578999999999999999999999999999987432110 1112568999999999999999999999
Q ss_pred EEEEcC--------------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 166 SIICPS--------------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 166 aVIh~a--------------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.|+|++ .|+ ++++|+++++++|||+||..||+
T Consensus 94 ~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg 147 (341)
T d1sb8a_ 94 YVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYG 147 (341)
T ss_dssp EEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGT
T ss_pred ccccccccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeC
Confidence 999872 122 88999999999999999999986
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.69 E-value=3.9e-18 Score=143.94 Aligned_cols=93 Identities=16% Similarity=0.184 Sum_probs=71.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccccc-----CCceEEEEccCCCHHHHHHhhcCccEEEEcC--
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-----GTYVESMAGDASNKKFLKTALRGVRSIICPS-- 171 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~-----g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a-- 171 (198)
+++|||||||||||++++++|+++|++|++++|......... ...+++...|+ ++.++.++|+|||++
T Consensus 1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~-----~~~~~~~~d~VihlAa~ 75 (312)
T d2b69a1 1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDV-----VEPLYIEVDQIYHLASP 75 (312)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCT-----TSCCCCCCSEEEECCSC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcCCCceEEEehHH-----HHHHHcCCCEEEECccc
Confidence 578999999999999999999999999999987432221111 12355555554 455778999999982
Q ss_pred ------------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 172 ------------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 ------------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.|+ ++++|++.++ |+||+||.+||+
T Consensus 76 ~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~-k~I~~SS~~vy~ 120 (312)
T d2b69a1 76 ASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYG 120 (312)
T ss_dssp CSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGB
T ss_pred CCchhHHhCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEEChheec
Confidence 122 7899999997 899999999985
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.69 E-value=6.5e-17 Score=137.07 Aligned_cols=99 Identities=19% Similarity=0.208 Sum_probs=82.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCc-------ccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-------NAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~-------~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
.+|+|||||||||||++++++|+++||+|++++++.- ......+.+++++.+|++|++.+..++.+++.|+|+
T Consensus 1 ~~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~~~~~v~~~ 80 (346)
T d1oc2a_ 1 QFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHY 80 (346)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred CcCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHhhhhhhhhh
Confidence 3789999999999999999999999999988887531 112234568999999999999999999999999997
Q ss_pred C--------------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 171 S--------------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 171 a--------------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
+ .|+ ++++|+..+ .++|++||..+|.
T Consensus 81 a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~-~k~i~~ss~~vyg 128 (346)
T d1oc2a_ 81 AAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD-IRFHHVSTDEVYG 128 (346)
T ss_dssp CSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHT-CEEEEEEEGGGGC
T ss_pred hhcccccchhhCcccceeeehHhHHhhhhhhcccc-ccccccccceEec
Confidence 2 122 788888888 5889999998884
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.69 E-value=5.6e-17 Score=125.54 Aligned_cols=99 Identities=21% Similarity=0.355 Sum_probs=83.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCc--EEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC----
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTR--IKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS---- 171 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~--VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a---- 171 (198)
.+++|||||||||||++++++|+++||+ |++++|++++... ...+++++.+|++|++.+.++++++|+|||++
T Consensus 2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~ 80 (252)
T d2q46a1 2 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK-IGGEADVFIGDITDADSINPAFQGIDALVILTSAVP 80 (252)
T ss_dssp SCCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHH-TTCCTTEEECCTTSHHHHHHHHTTCSEEEECCCCCC
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHh-ccCCcEEEEeeeccccccccccccceeeEEEEeecc
Confidence 5789999999999999999999999976 6667788766533 34679999999999999999999999999982
Q ss_pred -----------------------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 172 -----------------------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 -----------------------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.++ +++.+...+++++.+.|+..++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~ 137 (252)
T d2q46a1 81 KMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTN 137 (252)
T ss_dssp EECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTC
T ss_pred ccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCC
Confidence 012 56778888999999999877653
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.68 E-value=1e-16 Score=135.32 Aligned_cols=98 Identities=21% Similarity=0.219 Sum_probs=79.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc------c-------ccccCCceEEEEccCCCHHHHHHhhcCcc-
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN------A-------MESFGTYVESMAGDASNKKFLKTALRGVR- 165 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~------a-------~~~~g~~vevV~GDl~D~~sL~~AL~GvD- 165 (198)
++|||||||||||++|+++|+++||+|++++|.... . ......+++++.+|++|.+.+.+++.+.+
T Consensus 3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~ 82 (346)
T d1ek6a_ 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSF 82 (346)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCCE
T ss_pred CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeecccccccccccccccc
Confidence 589999999999999999999999999999752211 0 11224679999999999999999997765
Q ss_pred -EEEEcC--------------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 166 -SIICPS--------------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 166 -aVIh~a--------------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.|+|++ .|+ ++++|++.+|++|||+||..+|.
T Consensus 83 ~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~ 137 (346)
T d1ek6a_ 83 MAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYG 137 (346)
T ss_dssp EEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGC
T ss_pred ccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeee
Confidence 567762 122 78999999999999999998875
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.68 E-value=5.8e-17 Score=139.72 Aligned_cols=98 Identities=13% Similarity=0.063 Sum_probs=78.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc--c----c-cCCceEEEEccCCCHHHHHHhhcC--ccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM--E----S-FGTYVESMAGDASNKKFLKTALRG--VRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~--~----~-~g~~vevV~GDl~D~~sL~~AL~G--vDaVIh~ 170 (198)
|+|||||||||||++|+++|+++||+|++.+++..... . . -..+++++.+|++|+..+.+++++ +|+|||+
T Consensus 1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vihl 80 (361)
T d1kewa_ 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL 80 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEEEC
Confidence 68999999999999999999999999888776542211 1 1 125799999999999999999875 7999998
Q ss_pred C--------------------hhH--HHHHHHhCC---------CCeEEEEcccceec
Q 029118 171 S--------------------EGF--ISNAGSLKG---------VQHVILLSQGAVVC 197 (198)
Q Consensus 171 a--------------------~G~--lldAA~~~G---------VkRiV~vSS~~Vy~ 197 (198)
+ .|+ ++++|++.+ ++||||+||..||+
T Consensus 81 Aa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg 138 (361)
T d1kewa_ 81 AAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYG 138 (361)
T ss_dssp CSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGC
T ss_pred ccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeC
Confidence 3 122 778887664 56999999999985
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.66 E-value=7.5e-17 Score=138.60 Aligned_cols=99 Identities=20% Similarity=0.206 Sum_probs=76.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEe-------------C--C-ccc-------ccccCCceEEEEccCCCHH
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK-------------D--K-RNA-------MESFGTYVESMAGDASNKK 155 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR-------------~--~-~~a-------~~~~g~~vevV~GDl~D~~ 155 (198)
+|+|||||||||||++|+++|+++||+|+++.. + + ... ....+.+++++.+|++|.+
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~ 80 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE 80 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence 579999999999999999999999999999851 0 0 000 0112457999999999999
Q ss_pred HHHHhhcCc--cEEEEcC-----------------------hhH--HHHHHHhCCCC-eEEEEcccceec
Q 029118 156 FLKTALRGV--RSIICPS-----------------------EGF--ISNAGSLKGVQ-HVILLSQGAVVC 197 (198)
Q Consensus 156 sL~~AL~Gv--DaVIh~a-----------------------~G~--lldAA~~~GVk-RiV~vSS~~Vy~ 197 (198)
.+.++++++ |+|||++ .|+ ++++|++.+++ ++++.||..+|.
T Consensus 81 ~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~ 150 (393)
T d1i24a_ 81 FLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYG 150 (393)
T ss_dssp HHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGC
T ss_pred HHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeecccccccc
Confidence 999999876 9999972 122 78999988776 567777777764
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=99.65 E-value=2.4e-16 Score=132.53 Aligned_cols=97 Identities=14% Similarity=0.014 Sum_probs=76.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcccccc-cCCceEEEEccCCCHHHHHH-hhcCccEEEEcC-----
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMES-FGTYVESMAGDASNKKFLKT-ALRGVRSIICPS----- 171 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~~~-~g~~vevV~GDl~D~~sL~~-AL~GvDaVIh~a----- 171 (198)
|+|||||||||||++++++|+++|+ +|+++++........ ..++++++.+|++|.+.+.+ +++++|+|||++
T Consensus 1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~~~~~ 80 (342)
T d2blla1 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATP 80 (342)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCCCH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHHhCCCccccccccccc
Confidence 5899999999999999999999995 899998765433222 24679999999988766554 888999999982
Q ss_pred ---------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 172 ---------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 ---------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.|+ ++++|.+.+++. +|+||..+|.
T Consensus 81 ~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~~~-~~~ss~~~~~ 122 (342)
T d2blla1 81 IEYTRNPLRVFELDFEENLRIIRYCVKYRKRI-IFPSTSEVYG 122 (342)
T ss_dssp HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEE-EEECCGGGGB
T ss_pred cccccCCccccccccccccccccccccccccc-cccccccccc
Confidence 122 789999888755 6788888775
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=99.65 E-value=1.5e-16 Score=132.02 Aligned_cols=85 Identities=9% Similarity=0.113 Sum_probs=71.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcC--ccEEEEcC-----
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG--VRSIICPS----- 171 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~G--vDaVIh~a----- 171 (198)
+++|||||||||||++|+++|+++|+.|+++.+..+ .|+.|+..+.+.+++ +|.|||++
T Consensus 2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~~--------------~~~~~~~~~~~~~~~~~~d~v~~~a~~~~~ 67 (315)
T d1e6ua_ 2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE--------------LNLLDSRAVHDFFASERIDQVYLAAAKVGG 67 (315)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTT--------------CCTTCHHHHHHHHHHHCCSEEEECCCCCCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCchh--------------ccccCHHHHHHHHhhcCCCEEEEcchhccc
Confidence 578999999999999999999999999987643221 479999999998864 79999872
Q ss_pred ----------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 172 ----------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 ----------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.|+ ++++|++++++||||+||.+||+
T Consensus 68 ~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg 111 (315)
T d1e6ua_ 68 IVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYP 111 (315)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSC
T ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcC
Confidence 122 78999999999999999999986
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.65 E-value=6.4e-16 Score=132.58 Aligned_cols=99 Identities=19% Similarity=0.250 Sum_probs=79.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHH-CCCcEEEEEeCC---------cc--------------cccccCCceEEEEccCCCH
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIV-KRTRIKALVKDK---------RN--------------AMESFGTYVESMAGDASNK 154 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~-~G~~VralvR~~---------~~--------------a~~~~g~~vevV~GDl~D~ 154 (198)
.|+|||||||||||+||+++|++ .||+|+++++-. +. .......+++++.+|++|+
T Consensus 2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~ 81 (383)
T d1gy8a_ 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE 81 (383)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence 57999999999999999999996 799999987410 00 0011124689999999999
Q ss_pred HHHHHhhc---CccEEEEcC--------------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 155 KFLKTALR---GVRSIICPS--------------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 155 ~sL~~AL~---GvDaVIh~a--------------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
+.++++++ ++|+|||++ .++ ++++|++.++++++++|+..+|.
T Consensus 82 ~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~ 149 (383)
T d1gy8a_ 82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFG 149 (383)
T ss_dssp HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTB
T ss_pred HHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccCCccccccccccccc
Confidence 99999985 789999983 112 78999999999999999988764
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=99.64 E-value=2.7e-16 Score=131.93 Aligned_cols=99 Identities=17% Similarity=0.145 Sum_probs=76.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-----cCCceEEEEccCCCHHHHHHhhcCc--cEEEEc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTALRGV--RSIICP 170 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-----~g~~vevV~GDl~D~~sL~~AL~Gv--DaVIh~ 170 (198)
.+++|||||||||||++++++|+++||+|++++|+....... ...+++++.+|++|++.+.++++++ +.|+|+
T Consensus 7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~~ 86 (356)
T d1rkxa_ 7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHM 86 (356)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhchhhhhhhh
Confidence 358999999999999999999999999999999987643321 2356999999999999999999755 889987
Q ss_pred C--------------------hhH--HHHHHHhCC-CCeEEEEccccee
Q 029118 171 S--------------------EGF--ISNAGSLKG-VQHVILLSQGAVV 196 (198)
Q Consensus 171 a--------------------~G~--lldAA~~~G-VkRiV~vSS~~Vy 196 (198)
+ .|+ ++++|++.+ .+.+++.|+..+|
T Consensus 87 aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~ 135 (356)
T d1rkxa_ 87 AAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCY 135 (356)
T ss_dssp CSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGB
T ss_pred hccccccccccCCccccccccccchhhhhhhhccccccccccccccccc
Confidence 2 112 788887765 4555555554443
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.64 E-value=4.8e-16 Score=128.92 Aligned_cols=98 Identities=15% Similarity=0.119 Sum_probs=76.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc-c-----ccCCceEEEEccCCCHHHHHHhhcCc--cEEEEcC
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-E-----SFGTYVESMAGDASNKKFLKTALRGV--RSIICPS 171 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~-~-----~~g~~vevV~GDl~D~~sL~~AL~Gv--DaVIh~a 171 (198)
++|||||||||||++|+++|+++||+|++++|...... . ...++++++.+|++|+..+.+.+... +.++|++
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~a 80 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNLA 80 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhcccccccccccc
Confidence 58999999999999999999999999999999764321 1 12357999999999999999988654 5666652
Q ss_pred --------------------hhH--HHHHHHhCCCC-eEEEEcccceec
Q 029118 172 --------------------EGF--ISNAGSLKGVQ-HVILLSQGAVVC 197 (198)
Q Consensus 172 --------------------~G~--lldAA~~~GVk-RiV~vSS~~Vy~ 197 (198)
.|+ ++++|++.+++ +|++.||..+|.
T Consensus 81 ~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~ 129 (321)
T d1rpna_ 81 AQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFG 129 (321)
T ss_dssp SCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGC
T ss_pred ccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcC
Confidence 122 78999988866 677777777764
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.63 E-value=4.6e-16 Score=130.52 Aligned_cols=98 Identities=21% Similarity=0.224 Sum_probs=79.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEe------C--C-cc--cc-cccCCceEEEEccCCCHHHHHHhhcCccEE
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVK------D--K-RN--AM-ESFGTYVESMAGDASNKKFLKTALRGVRSI 167 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR------~--~-~~--a~-~~~g~~vevV~GDl~D~~sL~~AL~GvDaV 167 (198)
|+|||||||||||++++++|+++||+|.+..| . . .. .. ......++++.+|..+...+.......|.|
T Consensus 1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~v 80 (322)
T d1r6da_ 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI 80 (322)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhccccccceE
Confidence 68999999999999999999999997654422 1 1 11 11 112357999999999999999999999999
Q ss_pred EEcC--------------------hhH--HHHHHHhCCCCeEEEEcccceec
Q 029118 168 ICPS--------------------EGF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 168 Ih~a--------------------~G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
||++ .|+ ++++|++.++++|||+||.++|.
T Consensus 81 i~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg 132 (322)
T d1r6da_ 81 VHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYG 132 (322)
T ss_dssp EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGC
T ss_pred EeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeec
Confidence 9982 122 88999999999999999999985
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.61 E-value=8.3e-16 Score=128.12 Aligned_cols=99 Identities=12% Similarity=0.087 Sum_probs=74.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc-----cc-------cccCCceEEEEccCCCHHHHHHhhc--Cc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AM-------ESFGTYVESMAGDASNKKFLKTALR--GV 164 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~-----a~-------~~~g~~vevV~GDl~D~~sL~~AL~--Gv 164 (198)
++++||||||||||+||+++|+++||+|++++|.... .. ......++++.+|+++.+.+.++++ ++
T Consensus 1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 80 (339)
T d1n7ha_ 1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKP 80 (339)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhcc
Confidence 5789999999999999999999999999999995431 11 1112458899999999999999985 56
Q ss_pred cEEEEcC--------------------hhH--HHHHHHhC-----CCCeEEEEcccceec
Q 029118 165 RSIICPS--------------------EGF--ISNAGSLK-----GVQHVILLSQGAVVC 197 (198)
Q Consensus 165 DaVIh~a--------------------~G~--lldAA~~~-----GVkRiV~vSS~~Vy~ 197 (198)
|.|||++ .++ ++++++.. ...++++.||..+|.
T Consensus 81 D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~ 140 (339)
T d1n7ha_ 81 DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFG 140 (339)
T ss_dssp SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGT
T ss_pred chhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecc
Confidence 9999983 111 55666543 455778888776654
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.54 E-value=1.4e-14 Score=114.83 Aligned_cols=92 Identities=12% Similarity=0.160 Sum_probs=68.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC--cEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhh-cCccEEEEcC----
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL-RGVRSIICPS---- 171 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~--~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL-~GvDaVIh~a---- 171 (198)
.++|||||||||||++++++|+++|+ +|.+++|++... .+.++ .+..|...+...+ .++|+|||+.
T Consensus 2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~----~~~~~---~~~~d~~~~~~~~~~~~d~vi~~~g~~~ 74 (212)
T d2a35a1 2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE----HPRLD---NPVGPLAELLPQLDGSIDTAFCCLGTTI 74 (212)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC----CTTEE---CCBSCHHHHGGGCCSCCSEEEECCCCCH
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh----ccccc---ccccchhhhhhccccchheeeeeeeeec
Confidence 47999999999999999999999998 566666654331 12333 3444555555554 5689999871
Q ss_pred --------------hh--HHHHHHHhCCCCeEEEEcccceec
Q 029118 172 --------------EG--FISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 --------------~G--~lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.+ .++++|++.+++|+||+||.++|.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~ 116 (212)
T d2a35a1 75 KEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADA 116 (212)
T ss_dssp HHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCT
T ss_pred cccccccccccchhhhhhhccccccccccccccccccccccc
Confidence 11 178999999999999999999874
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.47 E-value=1.6e-14 Score=116.72 Aligned_cols=85 Identities=24% Similarity=0.226 Sum_probs=65.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCc--cEEEEcC------
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGV--RSIICPS------ 171 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~Gv--DaVIh~a------ 171 (198)
|+|||||||||||++++++|.++|+.|.+..|+. . +.+|++|++.+++++++. |.|||++
T Consensus 1 MKILItG~tGfiG~~l~~~L~~~g~~v~~~~~~~-~-----------~~~Dl~~~~~~~~~i~~~~~D~Vih~Aa~~~~~ 68 (298)
T d1n2sa_ 1 MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSK-E-----------FCGDFSNPKGVAETVRKLRPDVIVNAAAHTAVD 68 (298)
T ss_dssp CEEEEECTTSHHHHHHHHHTTTTSEEEEECTTCS-S-----------SCCCTTCHHHHHHHHHHHCCSEEEECCCCCCHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEECCCc-c-----------ccCcCCCHHHHHHHHHHcCCCEEEEeccccccc
Confidence 6899999999999999999999887554433322 1 347999999999999865 9999983
Q ss_pred --------------hh--HHHHHHHhCCCCeEEEEcccceec
Q 029118 172 --------------EG--FISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 172 --------------~G--~lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.+ .++++|++.+ .+++++||..+|.
T Consensus 69 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~~ss~~~~~ 109 (298)
T d1n2sa_ 69 KAESEPELAQLLNATSVEAIAKAANETG-AWVVHYSTDYVFP 109 (298)
T ss_dssp HHTTCHHHHHHHHTHHHHHHHHHHTTTT-CEEEEEEEGGGSC
T ss_pred ccccCccccccccccccccchhhhhccc-ccccccccccccc
Confidence 01 1678888777 5688888877764
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.37 E-value=3.3e-13 Score=108.77 Aligned_cols=82 Identities=15% Similarity=0.135 Sum_probs=64.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc--CccEEEEcC---h--
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPS---E-- 172 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~--GvDaVIh~a---~-- 172 (198)
|+|||||||||||++|+++|.++||+|+++.|+. .|+.|+..++++++ ..|.|||++ .
T Consensus 2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~---------------~D~~d~~~~~~~l~~~~~d~vih~a~~~~~~ 66 (281)
T d1vl0a_ 2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD---------------LDITNVLAVNKFFNEKKPNVVINCAAHTAVD 66 (281)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT---------------CCTTCHHHHHHHHHHHCCSEEEECCCCCCHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh---------------ccCCCHHHHHHHHHHcCCCEEEeeccccccc
Confidence 6899999999999999999999999999997743 48999999999997 459999982 0
Q ss_pred ---------------hH--HHHHHHhCCCCeEEEEcccceec
Q 029118 173 ---------------GF--ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 173 ---------------G~--lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
.. +.+++ .....++++.||..+|.
T Consensus 67 ~~~~~~~~~~~~n~~~~~~~~~~~-~~~~~~~~~~ss~~v~~ 107 (281)
T d1vl0a_ 67 KCEEQYDLAYKINAIGPKNLAAAA-YSVGAEIVQISTDYVFD 107 (281)
T ss_dssp HHHHCHHHHHHHHTHHHHHHHHHH-HHHTCEEEEEEEGGGSC
T ss_pred cccccchhhccccccccccccccc-ccccccccccccceeee
Confidence 00 33333 34557888888877764
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.17 E-value=1.3e-10 Score=96.45 Aligned_cols=101 Identities=15% Similarity=0.210 Sum_probs=82.1
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc------cccCCceEEEEccCCCHHHHHHhh-------c
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM------ESFGTYVESMAGDASNKKFLKTAL-------R 162 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~------~~~g~~vevV~GDl~D~~sL~~AL-------~ 162 (198)
+..++++|||||++.||++++++|.++|++|.+..|++++.. ...+.++..+.+|++|++++.+++ .
T Consensus 4 ~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g 83 (244)
T d1yb1a_ 4 SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIG 83 (244)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcC
Confidence 467899999999999999999999999999999999986542 124567899999999999988876 3
Q ss_pred CccEEEEcC------------------------hhH------HHHHHHhCCCCeEEEEccccee
Q 029118 163 GVRSIICPS------------------------EGF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 163 GvDaVIh~a------------------------~G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
.+|.+|+++ .|. ++..+++++-.|||++||...+
T Consensus 84 ~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~ 147 (244)
T d1yb1a_ 84 DVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGH 147 (244)
T ss_dssp CCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-C
T ss_pred CCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhc
Confidence 689999872 011 4566778888999999998764
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=99.15 E-value=1e-10 Score=97.54 Aligned_cols=101 Identities=13% Similarity=0.153 Sum_probs=81.6
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc---cccCCceEEEEccCCCHHHHHHhh-------cCcc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTAL-------RGVR 165 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~---~~~g~~vevV~GDl~D~~sL~~AL-------~GvD 165 (198)
+..++++|||||++.||+.++++|+++|++|.+..|+.++.. +.++..+.++++|++|++++++++ ..+|
T Consensus 2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 81 (254)
T d1hdca_ 2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVD 81 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCcc
Confidence 467899999999999999999999999999999999876543 234567899999999999998876 3689
Q ss_pred EEEEcC------------------------hhH------HHHHHHhCCCCeEEEEccccee
Q 029118 166 SIICPS------------------------EGF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 166 aVIh~a------------------------~G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
.+|+++ .+. ++..+++++-.+||++||...+
T Consensus 82 ilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~ 142 (254)
T d1hdca_ 82 GLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGL 142 (254)
T ss_dssp EEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred EEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhc
Confidence 999872 011 3445567778899999997654
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=99.13 E-value=5.6e-11 Score=98.19 Aligned_cols=100 Identities=13% Similarity=0.181 Sum_probs=80.3
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc---cccCCceEEEEccCCCHHHHHHhhc-------Ccc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALR-------GVR 165 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~---~~~g~~vevV~GDl~D~~sL~~AL~-------GvD 165 (198)
+..+++++||||++.||+.++++|+++|++|.+..|++++.. +.++.++..+.+|++|+++++++++ ++|
T Consensus 1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 80 (243)
T d1q7ba_ 1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVD 80 (243)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCcc
Confidence 356889999999999999999999999999999999876543 2345678899999999999888764 689
Q ss_pred EEEEcC------------------------hhH------HHHHHHhCCCCeEEEEcccce
Q 029118 166 SIICPS------------------------EGF------ISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 166 aVIh~a------------------------~G~------lldAA~~~GVkRiV~vSS~~V 195 (198)
.+|+.+ .+. ++..+++++-.+||++||...
T Consensus 81 ilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~ 140 (243)
T d1q7ba_ 81 ILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVG 140 (243)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHH
T ss_pred eehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhh
Confidence 999872 011 345556677789999999754
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.13 E-value=2.4e-11 Score=97.76 Aligned_cols=95 Identities=15% Similarity=0.091 Sum_probs=57.0
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcc--cccccCCc-eEEE-EccCCCHHHHHHhhcCccEEEEcC----
Q 029118 101 AVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN--AMESFGTY-VESM-AGDASNKKFLKTALRGVRSIICPS---- 171 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~--a~~~~g~~-vevV-~GDl~D~~sL~~AL~GvDaVIh~a---- 171 (198)
+|||||||||||++++++|+++|+ +|+++.+-... ........ ..+. ..|+.+.......+..+++|+|.+
T Consensus 1 ~ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~aa~~~ 80 (307)
T d1eq2a_ 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGACSS 80 (307)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEECCSCCC
T ss_pred CEEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhcccccchhhhccchHHHHHHhhhhcccchhhhhhhccccc
Confidence 499999999999999999999995 78887532221 11111111 1111 122222222223446789999872
Q ss_pred --------------hhH--HHHHHHhCCCCeEEEEcccce
Q 029118 172 --------------EGF--ISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 172 --------------~G~--lldAA~~~GVkRiV~vSS~~V 195 (198)
.++ ++++++..+++.+++.|+...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~v~~ss~~~~ 120 (307)
T d1eq2a_ 81 TTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATY 120 (307)
T ss_dssp TTCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGG
T ss_pred cccccccccccccccccccccccccccccccccccccccc
Confidence 111 778889999975555554433
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=99.13 E-value=3e-10 Score=93.72 Aligned_cols=102 Identities=13% Similarity=0.102 Sum_probs=81.8
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc----ccccCCceEEEEccCCCHHHHHHhh-------cC
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA----MESFGTYVESMAGDASNKKFLKTAL-------RG 163 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a----~~~~g~~vevV~GDl~D~~sL~~AL-------~G 163 (198)
|...++++|||||++.||+.+++.|.++|++|.+..|++.+. .+..+..+..+++|++|++++++++ ..
T Consensus 1 qrL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~ 80 (247)
T d2ew8a1 1 QRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGR 80 (247)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence 356788999999999999999999999999999999987532 1234667899999999999998876 37
Q ss_pred ccEEEEcC------------------------hhH------HHHHHHhCCCCeEEEEccccee
Q 029118 164 VRSIICPS------------------------EGF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 164 vDaVIh~a------------------------~G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
+|.+|+.+ .+. ++..+++++-.+||++||....
T Consensus 81 iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~ 143 (247)
T d2ew8a1 81 CDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYW 143 (247)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGG
T ss_pred CCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhc
Confidence 89999872 011 4455677788899999997653
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.13 E-value=1.5e-10 Score=96.05 Aligned_cols=100 Identities=12% Similarity=0.148 Sum_probs=80.1
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc---cccCCceEEEEccCCCHHHHHHhh-------cCccE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTAL-------RGVRS 166 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~---~~~g~~vevV~GDl~D~~sL~~AL-------~GvDa 166 (198)
..++++|||||++.||+.++++|+++|++|.+..|++++.. +.++..+.++++|++|++++++++ .++|.
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idi 83 (244)
T d1nffa_ 4 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV 83 (244)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeE
Confidence 56789999999999999999999999999999999886543 234567889999999999988776 36899
Q ss_pred EEEcC------------------------hhH------HHHHHHhCCCCeEEEEccccee
Q 029118 167 IICPS------------------------EGF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 167 VIh~a------------------------~G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
+|+.+ .+. ++..+++++-.+||++||...+
T Consensus 84 linnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~ 143 (244)
T d1nffa_ 84 LVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGL 143 (244)
T ss_dssp EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred EEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccc
Confidence 99872 011 3344566677899999997654
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.12 E-value=1.3e-10 Score=96.23 Aligned_cols=101 Identities=19% Similarity=0.220 Sum_probs=80.3
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc------cccCCceEEEEccCCCHHHHHHhhc------
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM------ESFGTYVESMAGDASNKKFLKTALR------ 162 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~------~~~g~~vevV~GDl~D~~sL~~AL~------ 162 (198)
-....+.+|||||++.||+.++++|.++|++|.+..|+.+++. ...+..+..+.+|++|++++.++++
T Consensus 6 f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 85 (251)
T d2c07a1 6 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH 85 (251)
T ss_dssp CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Confidence 3455789999999999999999999999999999999876542 1235678999999999999988774
Q ss_pred -CccEEEEcC------------------------hhH------HHHHHHhCCCCeEEEEcccce
Q 029118 163 -GVRSIICPS------------------------EGF------ISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 163 -GvDaVIh~a------------------------~G~------lldAA~~~GVkRiV~vSS~~V 195 (198)
.+|.+|+.+ .+. ++..+++++-.+||++||...
T Consensus 86 g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~ 149 (251)
T d2c07a1 86 KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVG 149 (251)
T ss_dssp SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHH
T ss_pred CCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHh
Confidence 789999872 011 344566677789999999754
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=99.12 E-value=1.7e-10 Score=95.56 Aligned_cols=100 Identities=11% Similarity=0.017 Sum_probs=78.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc-------CccEEEE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~-------GvDaVIh 169 (198)
..++++|||||++.||+.++++|+++|++|.+..|+++........+..+++.|++|+++++++++ .+|.+||
T Consensus 3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVn 82 (248)
T d2d1ya1 3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLVN 82 (248)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEEE
Confidence 467899999999999999999999999999999998765322212246789999999998888763 6899998
Q ss_pred cC------------------------hhH------HHHHHHhCCCCeEEEEccccee
Q 029118 170 PS------------------------EGF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 170 ~a------------------------~G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
.+ .+. ++..+++++-.+||++||...+
T Consensus 83 nAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~ 139 (248)
T d2d1ya1 83 NAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGL 139 (248)
T ss_dssp CCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGT
T ss_pred eCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccccccccccccccccc
Confidence 72 011 3455667777899999998654
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.12 E-value=3.1e-10 Score=93.41 Aligned_cols=96 Identities=15% Similarity=0.186 Sum_probs=78.0
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhh-------cCccEEE
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL-------RGVRSII 168 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL-------~GvDaVI 168 (198)
...++++|||||++.||+.++++|+++|++|.+..|+.+... .+..++.|++|++++++++ ..+|.+|
T Consensus 4 sl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLV 78 (237)
T d1uzma1 4 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK-----GLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLV 78 (237)
T ss_dssp CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-----TSEEEECCTTCHHHHHHHHHHHHHHHSSCSEEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhc-----CceEEEEecCCHHHHHHHHHHHHHhcCCceEEE
Confidence 456789999999999999999999999999999999876543 4677999999999988776 3689999
Q ss_pred EcC------------------------hhH------HHHHHHhCCCCeEEEEccccee
Q 029118 169 CPS------------------------EGF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 169 h~a------------------------~G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
+++ .+. ++..+++++-.+||++||....
T Consensus 79 nnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~ 136 (237)
T d1uzma1 79 SNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGL 136 (237)
T ss_dssp EECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-
T ss_pred eeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhc
Confidence 872 011 3455677888899999997654
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=99.11 E-value=3e-10 Score=94.11 Aligned_cols=99 Identities=17% Similarity=0.156 Sum_probs=79.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc-------cccCCceEEEEccCCCHHHHHHhh-------c
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------ESFGTYVESMAGDASNKKFLKTAL-------R 162 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~-------~~~g~~vevV~GDl~D~~sL~~AL-------~ 162 (198)
..++++|||||++.||+.++++|+++|++|.+..|+.++.. +..+..+..+++|++|++.+++++ .
T Consensus 3 l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 82 (251)
T d1vl8a_ 3 LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFG 82 (251)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 56789999999999999999999999999999999876532 223567889999999999988876 3
Q ss_pred CccEEEEcC------------------------hhH------HHHHHHhCCCCeEEEEcccce
Q 029118 163 GVRSIICPS------------------------EGF------ISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 163 GvDaVIh~a------------------------~G~------lldAA~~~GVkRiV~vSS~~V 195 (198)
.+|.+|+++ .+. ++..+++++-.+||++||...
T Consensus 83 ~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~ 145 (251)
T d1vl8a_ 83 KLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTV 145 (251)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGG
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchh
Confidence 689999872 011 345566778889999998644
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.09 E-value=2.7e-10 Score=94.35 Aligned_cols=74 Identities=12% Similarity=0.179 Sum_probs=64.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc---cccCCceEEEEccCCCHHHHHHhh-------cCccE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTAL-------RGVRS 166 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~---~~~g~~vevV~GDl~D~~sL~~AL-------~GvDa 166 (198)
..++++|||||++.||+.++++|+++|++|.+..|+.++.. +.++.++..+++|++|++++++++ ..+|.
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDi 82 (256)
T d1k2wa_ 3 LDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDI 82 (256)
T ss_dssp TTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence 45789999999999999999999999999999999876543 334677899999999999999876 36899
Q ss_pred EEEc
Q 029118 167 IICP 170 (198)
Q Consensus 167 VIh~ 170 (198)
+|+.
T Consensus 83 lVnn 86 (256)
T d1k2wa_ 83 LVNN 86 (256)
T ss_dssp EEEC
T ss_pred EEee
Confidence 9987
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.08 E-value=2.5e-10 Score=93.19 Aligned_cols=98 Identities=17% Similarity=0.237 Sum_probs=74.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCc-EEEEEeCCcc---cc------cccCCceEEEEccCCCHHHHHHhhc-----
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRN---AM------ESFGTYVESMAGDASNKKFLKTALR----- 162 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~-VralvR~~~~---a~------~~~g~~vevV~GDl~D~~sL~~AL~----- 162 (198)
|..+||||||+|.||+.++++|+++|++ |..+.|+..+ .. ...+..++++.+|++|+++++++++
T Consensus 8 p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~ 87 (259)
T d2fr1a1 8 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD 87 (259)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred CcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccc
Confidence 4459999999999999999999999996 6666776322 11 1235678999999999999998875
Q ss_pred -CccEEEEcC------------------------hhH--HHHHHHhCCCCeEEEEcccce
Q 029118 163 -GVRSIICPS------------------------EGF--ISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 163 -GvDaVIh~a------------------------~G~--lldAA~~~GVkRiV~vSS~~V 195 (198)
++|.|||++ .+. +.+++...+..+||++||++.
T Consensus 88 ~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~ 147 (259)
T d2fr1a1 88 VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFAS 147 (259)
T ss_dssp SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHH
T ss_pred ccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhh
Confidence 367888872 011 456667778899999999754
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=99.08 E-value=4.1e-10 Score=93.12 Aligned_cols=100 Identities=12% Similarity=0.143 Sum_probs=78.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-----cCCceEEEEccCCCHHHHHHhh-------cCc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTAL-------RGV 164 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-----~g~~vevV~GDl~D~~sL~~AL-------~Gv 164 (198)
..++++|||||++.||+.++++|.++|++|.+..|+.+...+. .+..+.++.+|++|++++++++ .++
T Consensus 4 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i 83 (251)
T d1zk4a1 4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPV 83 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCc
Confidence 5679999999999999999999999999999999987654211 2456899999999999888776 367
Q ss_pred cEEEEcC------------------------hhH------HHHHHHhCCCC-eEEEEccccee
Q 029118 165 RSIICPS------------------------EGF------ISNAGSLKGVQ-HVILLSQGAVV 196 (198)
Q Consensus 165 DaVIh~a------------------------~G~------lldAA~~~GVk-RiV~vSS~~Vy 196 (198)
|.+|+.+ .++ ++..+++++-. +||++||...+
T Consensus 84 DiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~ 146 (251)
T d1zk4a1 84 STLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGF 146 (251)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGT
T ss_pred eEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeecccee
Confidence 9999872 011 23445666665 89999997653
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.06 E-value=4.3e-10 Score=92.68 Aligned_cols=75 Identities=16% Similarity=0.151 Sum_probs=64.1
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc--cCCceEEEEccCCCHHHHHHhhc---CccEEEEc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--FGTYVESMAGDASNKKFLKTALR---GVRSIICP 170 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~--~g~~vevV~GDl~D~~sL~~AL~---GvDaVIh~ 170 (198)
+..++++|||||++.||+.++++|.++|++|.+..|+.++..+. ...+++.+..|++|++.++++++ ++|.+|++
T Consensus 2 dl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVnn 81 (242)
T d1cyda_ 2 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNN 81 (242)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEEC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHcCCCeEEEEC
Confidence 35689999999999999999999999999999999987654321 12468899999999999999986 57999987
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=99.06 E-value=7e-10 Score=92.47 Aligned_cols=102 Identities=12% Similarity=0.171 Sum_probs=78.9
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc-c------cccCCceEEEEccCCCHHHHHHhhc-----
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-M------ESFGTYVESMAGDASNKKFLKTALR----- 162 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a-~------~~~g~~vevV~GDl~D~~sL~~AL~----- 162 (198)
.+..++++|||||++.||+.++++|.++|++|.+..|+.+.. . ...+..+..+++|++|+++++++++
T Consensus 3 ~dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~ 82 (261)
T d1geea_ 3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKE 82 (261)
T ss_dssp GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 357789999999999999999999999999999999986532 1 1245678899999999999888773
Q ss_pred --CccEEEEcC------------------------hhH------HHHHHHhCCC-CeEEEEccccee
Q 029118 163 --GVRSIICPS------------------------EGF------ISNAGSLKGV-QHVILLSQGAVV 196 (198)
Q Consensus 163 --GvDaVIh~a------------------------~G~------lldAA~~~GV-kRiV~vSS~~Vy 196 (198)
.+|.+|+.+ .+. ++..+++++- .+||++||.+..
T Consensus 83 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~ 149 (261)
T d1geea_ 83 FGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEK 149 (261)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGT
T ss_pred hCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhc
Confidence 789999872 011 3444556654 458999997643
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=99.06 E-value=4.6e-10 Score=93.13 Aligned_cols=100 Identities=17% Similarity=0.145 Sum_probs=78.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc------cccCCceEEEEccCCCHHHHHHhh-------cC
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM------ESFGTYVESMAGDASNKKFLKTAL-------RG 163 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~------~~~g~~vevV~GDl~D~~sL~~AL-------~G 163 (198)
..++++|||||++.||+.++++|.++|++|.+..|+.++.. ...+..+..+++|++|++++++++ .+
T Consensus 3 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 82 (260)
T d1zema1 3 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGK 82 (260)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 46789999999999999999999999999999999876532 123557889999999999888776 36
Q ss_pred ccEEEEcC-------------------------hhH------HHHHHHhCCCCeEEEEccccee
Q 029118 164 VRSIICPS-------------------------EGF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 164 vDaVIh~a-------------------------~G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
+|.+|+.+ .+. ++..+++++-.+||++||...+
T Consensus 83 iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~ 146 (260)
T d1zema1 83 IDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGV 146 (260)
T ss_dssp CCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHH
T ss_pred CCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhc
Confidence 89999862 011 3344556677899999997643
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=99.06 E-value=6.9e-10 Score=92.14 Aligned_cols=101 Identities=16% Similarity=0.143 Sum_probs=79.2
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhh-------c
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTAL-------R 162 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL-------~ 162 (198)
+..++++|||||++.||+.++++|+++|++|.+..|+.++..+ ..+..+.++++|++|++++++++ .
T Consensus 5 ~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~ 84 (259)
T d2ae2a_ 5 NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFH 84 (259)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhC
Confidence 3568899999999999999999999999999999998765431 23567889999999999888765 2
Q ss_pred -CccEEEEcC------------------------hhH------HHHHHHhCCCCeEEEEccccee
Q 029118 163 -GVRSIICPS------------------------EGF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 163 -GvDaVIh~a------------------------~G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
.+|.+|+.+ .+. ++..+++.+-.+||++||....
T Consensus 85 ~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~ 149 (259)
T d2ae2a_ 85 GKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGA 149 (259)
T ss_dssp TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGT
T ss_pred CCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccc
Confidence 379999872 011 3344566777899999997653
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.05 E-value=5.4e-10 Score=92.01 Aligned_cols=101 Identities=16% Similarity=0.111 Sum_probs=78.8
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc--cCCceEEEEccCCCHHHHHHhhc---CccEEEEc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--FGTYVESMAGDASNKKFLKTALR---GVRSIICP 170 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~--~g~~vevV~GDl~D~~sL~~AL~---GvDaVIh~ 170 (198)
...++++|||||++.||+.++++|+++|++|.+..|+.++..+. ...+++.+..|++|++.++++++ .+|.+|+.
T Consensus 4 ~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDilVnn 83 (244)
T d1pr9a_ 4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNN 83 (244)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEEC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHhCCceEEEec
Confidence 46789999999999999999999999999999999987654322 12468899999999999998875 67999987
Q ss_pred C------------------------hhH------HHHH-HHhCCCCeEEEEccccee
Q 029118 171 S------------------------EGF------ISNA-GSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 171 a------------------------~G~------lldA-A~~~GVkRiV~vSS~~Vy 196 (198)
+ .+. ++.. .++.+-.+||++||....
T Consensus 84 Ag~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~ 140 (244)
T d1pr9a_ 84 AAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQ 140 (244)
T ss_dssp CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT
T ss_pred cccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeeccccccc
Confidence 2 011 2332 334567899999997653
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.05 E-value=8.8e-10 Score=91.38 Aligned_cols=77 Identities=19% Similarity=0.193 Sum_probs=64.5
Q ss_pred cccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc--------cCCceEEEEccCCCHHHHHHhh----
Q 029118 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--------FGTYVESMAGDASNKKFLKTAL---- 161 (198)
Q Consensus 94 ~~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~--------~g~~vevV~GDl~D~~sL~~AL---- 161 (198)
.+....+++|||||++.||+++++.|.++|++|.+..|++++..+. .+..+..+++|++|++++++++
T Consensus 5 M~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~ 84 (257)
T d1xg5a_ 5 MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIR 84 (257)
T ss_dssp CGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHH
Confidence 4567889999999999999999999999999999999987653211 1236788999999999988876
Q ss_pred ---cCccEEEEc
Q 029118 162 ---RGVRSIICP 170 (198)
Q Consensus 162 ---~GvDaVIh~ 170 (198)
.++|.+||+
T Consensus 85 ~~~g~iD~lVnn 96 (257)
T d1xg5a_ 85 SQHSGVDICINN 96 (257)
T ss_dssp HHHCCCSEEEEC
T ss_pred HhcCCCCEEEec
Confidence 478999997
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.04 E-value=5.1e-10 Score=93.07 Aligned_cols=100 Identities=21% Similarity=0.194 Sum_probs=76.3
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhhc-------
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR------- 162 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL~------- 162 (198)
+..++++|||||++.||+.++++|+++|++|.+..|+.++..+ ..+..+..+.+|++|++.++++++
T Consensus 5 ~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~ 84 (259)
T d1xq1a_ 5 SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFG 84 (259)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhC
Confidence 4568899999999999999999999999999999998765432 124568999999999998877652
Q ss_pred C-ccEEEEcC------------------------hhH------HHHHHHhCCCCeEEEEcccce
Q 029118 163 G-VRSIICPS------------------------EGF------ISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 163 G-vDaVIh~a------------------------~G~------lldAA~~~GVkRiV~vSS~~V 195 (198)
| +|.+|+++ .+. ++..+++++-.+||++||...
T Consensus 85 g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~ 148 (259)
T d1xq1a_ 85 GKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAG 148 (259)
T ss_dssp TCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----
T ss_pred CCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccc
Confidence 4 79999872 011 344556778889999999764
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=99.04 E-value=5.3e-10 Score=92.43 Aligned_cols=99 Identities=13% Similarity=0.098 Sum_probs=78.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc-cc-------cccCCceEEEEccCCCHHHHHHhhc-------
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AM-------ESFGTYVESMAGDASNKKFLKTALR------- 162 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~-a~-------~~~g~~vevV~GDl~D~~sL~~AL~------- 162 (198)
.++++|||||++.||+.++++|+++|++|.+..|+... .. ...+..+.++++|++|+++++++++
T Consensus 3 ~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 82 (260)
T d1x1ta1 3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG 82 (260)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred CcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 56899999999999999999999999999999987532 11 2235678899999999999988873
Q ss_pred CccEEEEcC------------------------hhH------HHHHHHhCCCCeEEEEccccee
Q 029118 163 GVRSIICPS------------------------EGF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 163 GvDaVIh~a------------------------~G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
.+|.+|+.+ .+. ++..+++++-.+||++||.+..
T Consensus 83 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~ 146 (260)
T d1x1ta1 83 RIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGL 146 (260)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred CCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccce
Confidence 689999872 011 3455677777899999997654
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.03 E-value=5.7e-10 Score=92.61 Aligned_cols=75 Identities=17% Similarity=0.170 Sum_probs=63.4
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc--cCCceEEEEccCCCHHHHHHhhc-------CccE
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--FGTYVESMAGDASNKKFLKTALR-------GVRS 166 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~--~g~~vevV~GDl~D~~sL~~AL~-------GvDa 166 (198)
...++++|||||++.||+.+++.|+++|++|.+..|+.+...+. ...++.++.+|++|+++++++++ .+|.
T Consensus 3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDi 82 (250)
T d1ydea1 3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDC 82 (250)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence 35688999999999999999999999999999999987654322 23568899999999999888763 6899
Q ss_pred EEEc
Q 029118 167 IICP 170 (198)
Q Consensus 167 VIh~ 170 (198)
+|+.
T Consensus 83 lVnn 86 (250)
T d1ydea1 83 VVNN 86 (250)
T ss_dssp EEEC
T ss_pred EEec
Confidence 9987
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=99.03 E-value=6.8e-10 Score=92.12 Aligned_cols=101 Identities=11% Similarity=0.139 Sum_probs=80.1
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc------cccCCceEEEEccCCCHHHHHHhh-------c
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM------ESFGTYVESMAGDASNKKFLKTAL-------R 162 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~------~~~g~~vevV~GDl~D~~sL~~AL-------~ 162 (198)
+..++++|||||++.||++++++|.++|++|.+..|+.++.. ...+..+..+++|++|++++++++ .
T Consensus 8 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g 87 (255)
T d1fmca_ 8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLG 87 (255)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 467899999999999999999999999999999999876532 123567899999999999988776 4
Q ss_pred CccEEEEcC-----------------------hhH------HHHHHHhCCCCeEEEEccccee
Q 029118 163 GVRSIICPS-----------------------EGF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 163 GvDaVIh~a-----------------------~G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
++|.+|+++ .+. ++...++.+-.+||++||.+.+
T Consensus 88 ~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~ 150 (255)
T d1fmca_ 88 KVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAE 150 (255)
T ss_dssp SCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred CCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchh
Confidence 789999872 011 3444566677799999997654
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=99.02 E-value=1.1e-09 Score=90.96 Aligned_cols=100 Identities=18% Similarity=0.163 Sum_probs=78.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc------cccCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM------ESFGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~------~~~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
..++++|||||++.||+.++++|+++|++|.+..|+++++. ...+..+.++.+|++|++.++++++ |
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g 83 (258)
T d1ae1a_ 4 LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG 83 (258)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 56889999999999999999999999999999999875532 1234568889999999998877652 4
Q ss_pred -ccEEEEcC-------------h-----------hH------HHHHHHhCCCCeEEEEccccee
Q 029118 164 -VRSIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 164 -vDaVIh~a-------------~-----------G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
+|.+|+++ + +. ++...++.+..+||++||....
T Consensus 84 ~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~ 147 (258)
T d1ae1a_ 84 KLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGF 147 (258)
T ss_dssp CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGT
T ss_pred CcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccc
Confidence 68888762 0 11 3345667788999999997653
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=99.01 E-value=1.4e-10 Score=92.05 Aligned_cols=76 Identities=12% Similarity=0.111 Sum_probs=65.9
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc---c--CCceEEEEccCCCHHHHHHhhcCccEEEE
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F--GTYVESMAGDASNKKFLKTALRGVRSIIC 169 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~---~--g~~vevV~GDl~D~~sL~~AL~GvDaVIh 169 (198)
.+..+++++||||+|.||+.++++|+++|++|.++.|++++..+. + ...+++...|+.|++.+++++.++|.|||
T Consensus 19 ~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~iDilin 98 (191)
T d1luaa1 19 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFT 98 (191)
T ss_dssp SCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCcCeeee
Confidence 366789999999999999999999999999999999998664322 1 13467889999999999999999999999
Q ss_pred c
Q 029118 170 P 170 (198)
Q Consensus 170 ~ 170 (198)
+
T Consensus 99 ~ 99 (191)
T d1luaa1 99 A 99 (191)
T ss_dssp C
T ss_pred c
Confidence 7
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.01 E-value=5.9e-10 Score=92.41 Aligned_cols=100 Identities=15% Similarity=0.127 Sum_probs=79.1
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc---cccCCceEEEEccCCCHHHHHHhhc-------Ccc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALR-------GVR 165 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~---~~~g~~vevV~GDl~D~~sL~~AL~-------GvD 165 (198)
...++++|||||++.||+.++++|+++|++|.+..|+.++.. +.++....++++|++|++.++++++ ..|
T Consensus 3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD 82 (253)
T d1hxha_ 3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLN 82 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence 356789999999999999999999999999999999876532 3346678899999999999888763 679
Q ss_pred EEEEcC------------------------hhH------HHHHHHhCCCCeEEEEccccee
Q 029118 166 SIICPS------------------------EGF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 166 aVIh~a------------------------~G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
.+|+.+ .+. ++..+++.+ .+||++||....
T Consensus 83 ilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-G~Iv~isS~~~~ 142 (253)
T d1hxha_ 83 VLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSW 142 (253)
T ss_dssp EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGT
T ss_pred eEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC-Cceecccchhhh
Confidence 999872 011 344455555 899999997654
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.00 E-value=1.2e-09 Score=89.96 Aligned_cols=98 Identities=15% Similarity=0.150 Sum_probs=77.1
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-cCCceEEEEccCCCHHHHHHhh-------cCccEEE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-FGTYVESMAGDASNKKFLKTAL-------RGVRSII 168 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-~g~~vevV~GDl~D~~sL~~AL-------~GvDaVI 168 (198)
..++++|||||++.||+.++++|+++|++|.+..|+.++..+. ...+++.+++|++|++++++++ ..+|.+|
T Consensus 3 L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilV 82 (242)
T d1ulsa_ 3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVV 82 (242)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCceEEE
Confidence 4578999999999999999999999999999999987654322 1235789999999999998876 3679999
Q ss_pred EcC------------------------hhH------HHHHHHhCCCCeEEEEcccc
Q 029118 169 CPS------------------------EGF------ISNAGSLKGVQHVILLSQGA 194 (198)
Q Consensus 169 h~a------------------------~G~------lldAA~~~GVkRiV~vSS~~ 194 (198)
+.+ .+. ++..+++.+-.+++.+||.+
T Consensus 83 nnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~ 138 (242)
T d1ulsa_ 83 HYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV 138 (242)
T ss_dssp ECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG
T ss_pred ECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeecccc
Confidence 872 011 34455677888888888854
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=99.00 E-value=1.7e-09 Score=89.84 Aligned_cols=100 Identities=13% Similarity=0.168 Sum_probs=78.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc--------ccCCceEEEEccCCCHHHHHHhh-------
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--------SFGTYVESMAGDASNKKFLKTAL------- 161 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~--------~~g~~vevV~GDl~D~~sL~~AL------- 161 (198)
..++++|||||++.||+.++++|+++|++|.+..|+.++..+ ..+..+..+++|++|++++++++
T Consensus 2 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 81 (258)
T d1iy8a_ 2 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF 81 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHh
Confidence 457899999999999999999999999999999998765321 12346788999999999998876
Q ss_pred cCccEEEEcC-------------------------hhH------HHHHHHhCCCCeEEEEccccee
Q 029118 162 RGVRSIICPS-------------------------EGF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 162 ~GvDaVIh~a-------------------------~G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
.++|.+|+.+ .+. ++..+++++-.+||++||....
T Consensus 82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~ 147 (258)
T d1iy8a_ 82 GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGI 147 (258)
T ss_dssp SCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGT
T ss_pred CCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhc
Confidence 4689999862 011 3344566778899999997653
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=98.99 E-value=1.7e-09 Score=89.74 Aligned_cols=101 Identities=6% Similarity=0.049 Sum_probs=79.3
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-----cCCceEEEEccCCCHHHHHHhhc-------C
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTALR-------G 163 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-----~g~~vevV~GDl~D~~sL~~AL~-------G 163 (198)
...++++|||||++.||+.++++|+++|++|.+..|+.++..+. ....+.++.+|++|+++++++++ .
T Consensus 3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 82 (268)
T d2bgka1 3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGK 82 (268)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 46788999999999999999999999999999999987654211 12357889999999999988873 6
Q ss_pred ccEEEEcC--------------------------hhH------HHHHHHhCCCCeEEEEccccee
Q 029118 164 VRSIICPS--------------------------EGF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 164 vDaVIh~a--------------------------~G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
+|.+|+++ .+. ++..+++++-.++|++||...+
T Consensus 83 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~ 147 (268)
T d2bgka1 83 LDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSF 147 (268)
T ss_dssp CCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGT
T ss_pred cceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCcccccccccc
Confidence 89999862 011 3455667788899999987543
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.98 E-value=8.9e-10 Score=82.40 Aligned_cols=90 Identities=19% Similarity=0.134 Sum_probs=72.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccC-CceEEEEccCCCHHHHHHh-hcCccEEEEcC--h-hH
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTA-LRGVRSIICPS--E-GF 174 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g-~~vevV~GDl~D~~sL~~A-L~GvDaVIh~a--~-G~ 174 (198)
|+|+|.|+ |.+|+++++.|.++|++|+++.+|++....... .++.++.||.+|++.|+++ ++.+|+++.+. . .+
T Consensus 1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~t~~d~~N 79 (132)
T d1lssa_ 1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEEVN 79 (132)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhhhhhhccCcccchhhhhhcChhhhhhhcccCCcHHHH
Confidence 68999998 999999999999999999999999876543211 2578999999999999999 68999999872 2 22
Q ss_pred --HHHHHHhCCCCeEEEE
Q 029118 175 --ISNAGSLKGVQHVILL 190 (198)
Q Consensus 175 --lldAA~~~GVkRiV~v 190 (198)
+...++..+++++|-.
T Consensus 80 ~~~~~~~k~~~~~~iI~~ 97 (132)
T d1lssa_ 80 LMSSLLAKSYGINKTIAR 97 (132)
T ss_dssp HHHHHHHHHTTCCCEEEE
T ss_pred HHHHHHHHHcCCceEEEE
Confidence 3445677788887743
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=98.97 E-value=2.2e-09 Score=88.60 Aligned_cols=72 Identities=19% Similarity=0.254 Sum_probs=61.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc------cccCCceEEEEccCCCHHHHHHhh-------cCcc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM------ESFGTYVESMAGDASNKKFLKTAL-------RGVR 165 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~------~~~g~~vevV~GDl~D~~sL~~AL-------~GvD 165 (198)
++.+|||||++.||+.++++|.++|++|.+..|++++.. ...+..+..+++|++|++++++++ .++|
T Consensus 1 KKValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 80 (255)
T d1gega_ 1 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD 80 (255)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred CCEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCcc
Confidence 355799999999999999999999999999999886543 123567889999999999988876 3689
Q ss_pred EEEEc
Q 029118 166 SIICP 170 (198)
Q Consensus 166 aVIh~ 170 (198)
.+|+.
T Consensus 81 ilVnn 85 (255)
T d1gega_ 81 VIVNN 85 (255)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 99987
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.97 E-value=1.3e-09 Score=89.92 Aligned_cols=99 Identities=13% Similarity=0.106 Sum_probs=75.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc-------c-cCCceEEEEccCCCHHHHHHhh-------c
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------S-FGTYVESMAGDASNKKFLKTAL-------R 162 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~-------~-~g~~vevV~GDl~D~~sL~~AL-------~ 162 (198)
.++++|||||++.||+.++++|+++|++|.+..|+.++..+ . -+..+.++.+|++|++++++++ .
T Consensus 2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 81 (254)
T d2gdza1 2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG 81 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence 46899999999999999999999999999999998764321 1 1346889999999999998876 3
Q ss_pred CccEEEEcC----------------hhH------HHHHHHhCC---CCeEEEEccccee
Q 029118 163 GVRSIICPS----------------EGF------ISNAGSLKG---VQHVILLSQGAVV 196 (198)
Q Consensus 163 GvDaVIh~a----------------~G~------lldAA~~~G---VkRiV~vSS~~Vy 196 (198)
++|.+|+.+ .+. ++..+++++ -.+||++||...+
T Consensus 82 ~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~ 140 (254)
T d2gdza1 82 RLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGL 140 (254)
T ss_dssp CCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGT
T ss_pred CcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhc
Confidence 689999872 111 334443332 3579999998654
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=98.97 E-value=1.5e-09 Score=90.63 Aligned_cols=74 Identities=22% Similarity=0.325 Sum_probs=63.6
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc---cccCCceEEEEccCCCHHHHHHhh-------cCccE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTAL-------RGVRS 166 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~---~~~g~~vevV~GDl~D~~sL~~AL-------~GvDa 166 (198)
..++++|||||++.||+.++++|.++|++|.+..|++++.. ..++..+..+.+|++|++.+++++ ..+|.
T Consensus 3 L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idi 82 (276)
T d1bdba_ 3 LKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDT 82 (276)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCccc
Confidence 46789999999999999999999999999999999876543 234567899999999999988876 37899
Q ss_pred EEEc
Q 029118 167 IICP 170 (198)
Q Consensus 167 VIh~ 170 (198)
+|+.
T Consensus 83 lvnn 86 (276)
T d1bdba_ 83 LIPN 86 (276)
T ss_dssp EECC
T ss_pred cccc
Confidence 9976
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=98.94 E-value=1.9e-09 Score=88.60 Aligned_cols=97 Identities=11% Similarity=0.209 Sum_probs=76.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCc-------EEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhh-----
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTR-------IKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTAL----- 161 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~-------VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL----- 161 (198)
..||||||++.||+.++++|.++|++ |....|+.+...+ ..+..+..+.+|++|++++++++
T Consensus 2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~ 81 (240)
T d2bd0a1 2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE 81 (240)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 35899999999999999999999998 7888888765321 23566889999999999988776
Q ss_pred --cCccEEEEcC------------------------hhH------HHHHHHhCCCCeEEEEccccee
Q 029118 162 --RGVRSIICPS------------------------EGF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 162 --~GvDaVIh~a------------------------~G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
..+|.+|+.+ .+. ++..+++++-.+||++||.+.+
T Consensus 82 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~ 148 (240)
T d2bd0a1 82 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAAT 148 (240)
T ss_dssp HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred HcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhc
Confidence 3689999872 011 4555677777899999998654
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=98.93 E-value=2.1e-09 Score=88.52 Aligned_cols=97 Identities=18% Similarity=0.248 Sum_probs=74.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeC-Ccccc------cccCCceEEEEccCCCHHHHHHhhc-------Ccc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-KRNAM------ESFGTYVESMAGDASNKKFLKTALR-------GVR 165 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~-~~~a~------~~~g~~vevV~GDl~D~~sL~~AL~-------GvD 165 (198)
+.+|||||++.||+.++++|+++|++|.+..++ ++... ...+..+..+++|++|+++++++++ .+|
T Consensus 2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 81 (244)
T d1edoa_ 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID 81 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 479999999999999999999999999887654 33221 2245678899999999999988763 689
Q ss_pred EEEEcC------------------------hhH------HHHHHHhCCCCeEEEEccccee
Q 029118 166 SIICPS------------------------EGF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 166 aVIh~a------------------------~G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
.+|+.+ .+. ++..+++++-.+||++||...+
T Consensus 82 iLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~ 142 (244)
T d1edoa_ 82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGL 142 (244)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHH
T ss_pred ccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhc
Confidence 999872 011 3455666677899999997643
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=98.92 E-value=3.2e-09 Score=87.45 Aligned_cols=98 Identities=13% Similarity=0.170 Sum_probs=76.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc------cccCCceEEEEccCCCHHHHHHhhc-------Ccc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM------ESFGTYVESMAGDASNKKFLKTALR-------GVR 165 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~------~~~g~~vevV~GDl~D~~sL~~AL~-------GvD 165 (198)
++..|||||++.||+.++++|.++|++|.+..|++++.. ...+..+..+++|++|+++++++++ .+|
T Consensus 2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD 81 (257)
T d2rhca1 2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD 81 (257)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence 467899999999999999999999999999999876532 1235678999999999999988763 689
Q ss_pred EEEEcC------------------------hhH--HHHHH------HhCCCCeEEEEccccee
Q 029118 166 SIICPS------------------------EGF--ISNAG------SLKGVQHVILLSQGAVV 196 (198)
Q Consensus 166 aVIh~a------------------------~G~--lldAA------~~~GVkRiV~vSS~~Vy 196 (198)
.+|+++ .+. +.+++ ++.+-.+||.+||...+
T Consensus 82 ilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~ 144 (257)
T d2rhca1 82 VLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGK 144 (257)
T ss_dssp EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGT
T ss_pred EEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccc
Confidence 999872 011 33333 34567899999997553
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=98.92 E-value=3.8e-09 Score=86.13 Aligned_cols=72 Identities=13% Similarity=0.203 Sum_probs=60.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHH---CCCcEEEEEeCCcccccc-----cCCceEEEEccCCCHHHHHHhhc--------
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIV---KRTRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTALR-------- 162 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~---~G~~VralvR~~~~a~~~-----~g~~vevV~GDl~D~~sL~~AL~-------- 162 (198)
+++||||||++.||+.++++|+. +|++|.+..|++++..+. .+.++.++..|++|+++++++++
T Consensus 2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~ 81 (248)
T d1snya_ 2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD 81 (248)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence 67899999999999999999974 799999999998765321 24679999999999998887653
Q ss_pred -CccEEEEc
Q 029118 163 -GVRSIICP 170 (198)
Q Consensus 163 -GvDaVIh~ 170 (198)
.+|.+|+.
T Consensus 82 ~~iDiLvnN 90 (248)
T d1snya_ 82 QGLNVLFNN 90 (248)
T ss_dssp GCCSEEEEC
T ss_pred CCcceEEee
Confidence 47899986
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=98.90 E-value=4.8e-09 Score=85.42 Aligned_cols=97 Identities=15% Similarity=0.158 Sum_probs=76.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCC-HHHHHHhhcCccEEEEcC----
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN-KKFLKTALRGVRSIICPS---- 171 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D-~~sL~~AL~GvDaVIh~a---- 171 (198)
...+++|||||++.||+.++++|+++|++|.+..|+.+...+ ...+++..|+++ .+.+.+.+..+|.+|+.+
T Consensus 2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~---~~~~~~~~Dv~~~~~~~~~~~g~iD~lVnnAG~~~ 78 (234)
T d1o5ia_ 2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR---SGHRYVVCDLRKDLDLLFEKVKEVDILVLNAGGPK 78 (234)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH---TCSEEEECCTTTCHHHHHHHSCCCSEEEECCCCCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHh---cCCcEEEcchHHHHHHHHHHhCCCcEEEecccccC
Confidence 357899999999999999999999999999999998766543 235788999976 466677778999999872
Q ss_pred ---------h-----------hH------HHHHHHhCCCCeEEEEccccee
Q 029118 172 ---------E-----------GF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 172 ---------~-----------G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
+ +. ++..+++.+-.++|++||....
T Consensus 79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~ 129 (234)
T d1o5ia_ 79 AGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVI 129 (234)
T ss_dssp CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred CcchhhhhhHHHHHHhhhhhhhhhhhhhccccccccccccccccccccccc
Confidence 0 11 3455667788899999997553
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.89 E-value=3.6e-09 Score=89.66 Aligned_cols=75 Identities=11% Similarity=0.155 Sum_probs=63.1
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc-----------ccCCceEEEEccCCCHHHHHHhh---
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-----------SFGTYVESMAGDASNKKFLKTAL--- 161 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~-----------~~g~~vevV~GDl~D~~sL~~AL--- 161 (198)
...++++|||||++.||+.++++|+++|++|.+..|+.++... ..+..+..+.+|++|++++++++
T Consensus 9 ~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~ 88 (297)
T d1yxma1 9 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST 88 (297)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHH
Confidence 3578899999999999999999999999999999998754321 12356889999999999988876
Q ss_pred ----cCccEEEEc
Q 029118 162 ----RGVRSIICP 170 (198)
Q Consensus 162 ----~GvDaVIh~ 170 (198)
.++|.+|+.
T Consensus 89 ~~~~G~iDiLVnn 101 (297)
T d1yxma1 89 LDTFGKINFLVNN 101 (297)
T ss_dssp HHHHSCCCEEEEC
T ss_pred HHHhCCeEEEEee
Confidence 368999987
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=98.88 E-value=4.4e-09 Score=87.70 Aligned_cols=99 Identities=10% Similarity=0.092 Sum_probs=76.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------c---CCceEEEEccCCCHHHHHHhhc-----
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------F---GTYVESMAGDASNKKFLKTALR----- 162 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~---g~~vevV~GDl~D~~sL~~AL~----- 162 (198)
..++++|||||++.||+.++++|+++|++|.+..|+.++..+. . +..+..+++|++|+++++++++
T Consensus 2 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 81 (274)
T d1xhla_ 2 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK 81 (274)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999999987653211 1 2358899999999999888763
Q ss_pred --CccEEEEcC---------------h-----------hH------HHHHHHhCCCCeEEEEcccce
Q 029118 163 --GVRSIICPS---------------E-----------GF------ISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 163 --GvDaVIh~a---------------~-----------G~------lldAA~~~GVkRiV~vSS~~V 195 (198)
.+|.+|+.+ + +. ++..+++.+-.+|+++||.+.
T Consensus 82 ~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~ 148 (274)
T d1xhla_ 82 FGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAG 148 (274)
T ss_dssp HSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGS
T ss_pred cCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhc
Confidence 679999862 0 11 334456677788888888653
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=98.88 E-value=7.2e-09 Score=85.46 Aligned_cols=75 Identities=16% Similarity=0.352 Sum_probs=64.5
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc-------cccCCceEEEEccCCCHHHHHHhhc------
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------ESFGTYVESMAGDASNKKFLKTALR------ 162 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~-------~~~g~~vevV~GDl~D~~sL~~AL~------ 162 (198)
+..++++|||||++.||+.++++|+++|++|.+..|+.++.. ...+..+..+++|++|+++++++++
T Consensus 6 ~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 85 (260)
T d1h5qa_ 6 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADL 85 (260)
T ss_dssp CCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence 567889999999999999999999999999999999886542 2235678999999999999888773
Q ss_pred -CccEEEEc
Q 029118 163 -GVRSIICP 170 (198)
Q Consensus 163 -GvDaVIh~ 170 (198)
.+|.+|++
T Consensus 86 g~iDilVnn 94 (260)
T d1h5qa_ 86 GPISGLIAN 94 (260)
T ss_dssp CSEEEEEEC
T ss_pred CCCcEeccc
Confidence 67999987
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=98.84 E-value=1e-08 Score=75.90 Aligned_cols=91 Identities=9% Similarity=0.046 Sum_probs=72.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHh-hcCccEEEEc-C--hhH-
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICP-S--EGF- 174 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~A-L~GvDaVIh~-a--~G~- 174 (198)
++++|.|+ |.+|+++++.|.++|++|+++..|++........+..++.||.+|++.|.+| ++.+|+||.+ . ...
T Consensus 1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~~~~~~~~ 79 (134)
T d2hmva1 1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANIQAS 79 (134)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTTTCSEEEECCTTCTTHHHHHTGGGCSEEEECCCSCHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHHhCCcceeeecccchhhhccCCccccEEEEEcCchHHhH
Confidence 46888877 9999999999999999999999999877655556678999999999999998 8899999876 2 222
Q ss_pred --HHHHHHhCCCCeEEEEc
Q 029118 175 --ISNAGSLKGVQHVILLS 191 (198)
Q Consensus 175 --lldAA~~~GVkRiV~vS 191 (198)
+..+++..+..+++-..
T Consensus 80 ~~~~~~~~~~~~~~iiar~ 98 (134)
T d2hmva1 80 TLTTLLLKELDIPNIWVKA 98 (134)
T ss_dssp HHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHcCCCcEEeec
Confidence 33445667777776543
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=98.84 E-value=6.9e-09 Score=86.23 Aligned_cols=75 Identities=11% Similarity=0.168 Sum_probs=62.5
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc----c--c---CCceEEEEccCCCHHHHHHhhc----
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME----S--F---GTYVESMAGDASNKKFLKTALR---- 162 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~----~--~---g~~vevV~GDl~D~~sL~~AL~---- 162 (198)
...++++|||||++.||+.++++|.++|++|.+..|+.++..+ . . +..+..+++|++|+++++++++
T Consensus 2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~ 81 (272)
T d1xkqa_ 2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK 81 (272)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 3567899999999999999999999999999999998765321 1 1 2358899999999999887763
Q ss_pred ---CccEEEEc
Q 029118 163 ---GVRSIICP 170 (198)
Q Consensus 163 ---GvDaVIh~ 170 (198)
++|.+|+.
T Consensus 82 ~~g~iDilvnn 92 (272)
T d1xkqa_ 82 QFGKIDVLVNN 92 (272)
T ss_dssp HHSCCCEEEEC
T ss_pred HhCCceEEEeC
Confidence 68999986
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.81 E-value=1.5e-08 Score=83.19 Aligned_cols=99 Identities=13% Similarity=0.105 Sum_probs=77.5
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc-cCCceEEEEccCCCHHHHHHhh---cCccEEEEcC
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-FGTYVESMAGDASNKKFLKTAL---RGVRSIICPS 171 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~-~g~~vevV~GDl~D~~sL~~AL---~GvDaVIh~a 171 (198)
...++++|||||++.||+.+++.|+++|++|.+..|++++..+. ...+++....|+.+.+.++... .++|.+||++
T Consensus 3 ~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~id~lVn~a 82 (245)
T d2ag5a1 3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVA 82 (245)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCceeeeeccccccccccccccccceeEEecc
Confidence 35788999999999999999999999999999999998665432 2346889999999988777665 5789999972
Q ss_pred -------------h-----------hH------HHHHHHhCCCCeEEEEcccc
Q 029118 172 -------------E-----------GF------ISNAGSLKGVQHVILLSQGA 194 (198)
Q Consensus 172 -------------~-----------G~------lldAA~~~GVkRiV~vSS~~ 194 (198)
+ +. ++....+.+-.+||++||..
T Consensus 83 g~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~ 135 (245)
T d2ag5a1 83 GFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVA 135 (245)
T ss_dssp CCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSB
T ss_pred cccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechh
Confidence 0 11 33445667778999998853
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=98.81 E-value=3e-08 Score=81.91 Aligned_cols=101 Identities=12% Similarity=0.039 Sum_probs=74.4
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------c-cCCceEEEEccCC-CHHHHHHhh------
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------S-FGTYVESMAGDAS-NKKFLKTAL------ 161 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------~-~g~~vevV~GDl~-D~~sL~~AL------ 161 (198)
+..++++|||||++.||..++++|+++|++|.++.|+.++... . -+.++.++..|++ +.+.+++++
T Consensus 2 ~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 81 (254)
T d1sbya1 2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQ 81 (254)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHH
Confidence 3568899999999999999999999999999999998764321 1 1246889999998 555565554
Q ss_pred -cCccEEEEcC----------------hhH------HHHHHHhC---CCCeEEEEccccee
Q 029118 162 -RGVRSIICPS----------------EGF------ISNAGSLK---GVQHVILLSQGAVV 196 (198)
Q Consensus 162 -~GvDaVIh~a----------------~G~------lldAA~~~---GVkRiV~vSS~~Vy 196 (198)
..+|.+|+.+ .|. ++..+.+. .-.+||++||...+
T Consensus 82 ~g~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~ 142 (254)
T d1sbya1 82 LKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGF 142 (254)
T ss_dssp HSCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGT
T ss_pred cCCCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhc
Confidence 4789999873 111 33444332 45789999997654
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=98.81 E-value=1.5e-08 Score=83.89 Aligned_cols=75 Identities=11% Similarity=0.133 Sum_probs=64.0
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc-------cccCCceEEEEccCCCHHHHHHhh-------
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------ESFGTYVESMAGDASNKKFLKTAL------- 161 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~-------~~~g~~vevV~GDl~D~~sL~~AL------- 161 (198)
+..++++|||||||.||++++++|+++|++|.+..|+.++.. ...+..+.++.+|++|++++.+++
T Consensus 22 ~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~ 101 (294)
T d1w6ua_ 22 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVA 101 (294)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhc
Confidence 677899999999999999999999999999999999875432 123566889999999999988765
Q ss_pred cCccEEEEc
Q 029118 162 RGVRSIICP 170 (198)
Q Consensus 162 ~GvDaVIh~ 170 (198)
.++|.+|++
T Consensus 102 g~iDilvnn 110 (294)
T d1w6ua_ 102 GHPNIVINN 110 (294)
T ss_dssp CSCSEEEEC
T ss_pred cccchhhhh
Confidence 478999987
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=98.81 E-value=1e-08 Score=84.69 Aligned_cols=74 Identities=12% Similarity=0.162 Sum_probs=62.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc------c---CCceEEEEccCCCHHHHHHhhc-----
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------F---GTYVESMAGDASNKKFLKTALR----- 162 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~------~---g~~vevV~GDl~D~~sL~~AL~----- 162 (198)
..++.+|||||++.||+.++++|+++|++|.+..|+.++..+. . +.++..+++|++|++.++++++
T Consensus 3 l~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~ 82 (264)
T d1spxa_ 3 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK 82 (264)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 5678999999999999999999999999999999987653211 1 2358999999999999988773
Q ss_pred --CccEEEEc
Q 029118 163 --GVRSIICP 170 (198)
Q Consensus 163 --GvDaVIh~ 170 (198)
++|.+|++
T Consensus 83 ~g~iDilvnn 92 (264)
T d1spxa_ 83 FGKLDILVNN 92 (264)
T ss_dssp HSCCCEEEEC
T ss_pred hCCCCEeecc
Confidence 68999986
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.80 E-value=1.3e-08 Score=85.38 Aligned_cols=97 Identities=19% Similarity=0.218 Sum_probs=72.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEE---eCCcccc---------cccCCceEEEEccCCCHHHHHHhhc----
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALV---KDKRNAM---------ESFGTYVESMAGDASNKKFLKTALR---- 162 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~Vralv---R~~~~a~---------~~~g~~vevV~GDl~D~~sL~~AL~---- 162 (198)
++.+|||||++.||++++++|.++|.+|..+. |+.+... ...+..+..+..|++|++++.++++
T Consensus 2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 81 (285)
T d1jtva_ 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE 81 (285)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence 56789999999999999999999998866554 4433221 1134578999999999999998873
Q ss_pred -CccEEEEcC------------------------hhH------HHHHHHhCCCCeEEEEcccce
Q 029118 163 -GVRSIICPS------------------------EGF------ISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 163 -GvDaVIh~a------------------------~G~------lldAA~~~GVkRiV~vSS~~V 195 (198)
.+|.+|+.+ .|. ++..+++++-.+||++||.+.
T Consensus 82 g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g 145 (285)
T d1jtva_ 82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGG 145 (285)
T ss_dssp SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGG
T ss_pred cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhh
Confidence 468888862 011 455567788899999999754
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.75 E-value=4.1e-09 Score=87.14 Aligned_cols=72 Identities=17% Similarity=0.172 Sum_probs=59.5
Q ss_pred CCeE-EEEcCCChHHHHHHHHHHHC-CCcEEEEEeCCccccc------ccCCceEEEEccCCCHHHHHHhh-------cC
Q 029118 99 RDAV-LVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTAL-------RG 163 (198)
Q Consensus 99 ~~~I-LVTGATGfIG~~Vvr~Ll~~-G~~VralvR~~~~a~~------~~g~~vevV~GDl~D~~sL~~AL-------~G 163 (198)
+++| |||||++.||+.++++|+++ |++|.+..|+.++..+ ..+..++++++|++|.+++++++ ..
T Consensus 2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~ 81 (275)
T d1wmaa1 2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG 81 (275)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCC
Confidence 3455 89999999999999999985 8999999999876431 23567899999999999988765 36
Q ss_pred ccEEEEc
Q 029118 164 VRSIICP 170 (198)
Q Consensus 164 vDaVIh~ 170 (198)
+|.+|+.
T Consensus 82 iDiLVnN 88 (275)
T d1wmaa1 82 LDVLVNN 88 (275)
T ss_dssp EEEEEEC
T ss_pred cEEEEEc
Confidence 8999987
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=98.73 E-value=1.8e-08 Score=82.14 Aligned_cols=72 Identities=24% Similarity=0.287 Sum_probs=60.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC--cEEEEEeCCccccc---ccCCceEEEEccCCCHHHHHHhhc---------Cc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR---------GV 164 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~--~VralvR~~~~a~~---~~g~~vevV~GDl~D~~sL~~AL~---------Gv 164 (198)
+++||||||++.||+.++++|+++|+ .|.+..|+.++..+ ..+.++.++..|++|.++++++++ ++
T Consensus 3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~i 82 (250)
T d1yo6a1 3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL 82 (250)
T ss_dssp CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCe
Confidence 47899999999999999999999996 57777898876543 345679999999999999887752 48
Q ss_pred cEEEEc
Q 029118 165 RSIICP 170 (198)
Q Consensus 165 DaVIh~ 170 (198)
|.+|+.
T Consensus 83 dilinn 88 (250)
T d1yo6a1 83 SLLINN 88 (250)
T ss_dssp CEEEEC
T ss_pred EEEEEc
Confidence 999987
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.72 E-value=4.3e-08 Score=80.92 Aligned_cols=74 Identities=16% Similarity=0.209 Sum_probs=61.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc-------ccCCceEEEEccCCCHHHHHHhh-------c
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------SFGTYVESMAGDASNKKFLKTAL-------R 162 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~-------~~g~~vevV~GDl~D~~sL~~AL-------~ 162 (198)
..++++||||||+.||++++++|+++|++|.+..|+.++..+ ..+..+..+..|+.+........ .
T Consensus 12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g 91 (269)
T d1xu9a_ 12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG 91 (269)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence 778999999999999999999999999999999999765422 23456888999999988877654 3
Q ss_pred CccEEEEc
Q 029118 163 GVRSIICP 170 (198)
Q Consensus 163 GvDaVIh~ 170 (198)
+.|.+++.
T Consensus 92 ~~~~li~n 99 (269)
T d1xu9a_ 92 GLDMLILN 99 (269)
T ss_dssp SCSEEEEC
T ss_pred Cccccccc
Confidence 66888875
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=98.72 E-value=1.9e-08 Score=82.37 Aligned_cols=74 Identities=15% Similarity=0.206 Sum_probs=63.8
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc---cccCCceEEEEccCCCHHHHHHhhc-------CccE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~---~~~g~~vevV~GDl~D~~sL~~AL~-------GvDa 166 (198)
..++++|||||++.||+.++++|+++|++|.+..|+.++.. +..+..+.++++|++|++.++++++ .+|.
T Consensus 3 l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDi 82 (241)
T d2a4ka1 3 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG 82 (241)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence 46789999999999999999999999999999999886543 3346678899999999999987763 6899
Q ss_pred EEEc
Q 029118 167 IICP 170 (198)
Q Consensus 167 VIh~ 170 (198)
+|+.
T Consensus 83 Linn 86 (241)
T d2a4ka1 83 VAHF 86 (241)
T ss_dssp EEEG
T ss_pred eccc
Confidence 9997
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.68 E-value=1.9e-08 Score=82.35 Aligned_cols=66 Identities=11% Similarity=0.031 Sum_probs=54.4
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHH---CCCcEEEEEeCCcccccc--------cCCceEEEEccCCCHHHHHHhh
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIV---KRTRIKALVKDKRNAMES--------FGTYVESMAGDASNKKFLKTAL 161 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~---~G~~VralvR~~~~a~~~--------~g~~vevV~GDl~D~~sL~~AL 161 (198)
...++.++||||++.||+.++++|.+ +|++|.+..|+.++..+. .+..+..+++|++|++++++++
T Consensus 3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~ 79 (259)
T d1oaaa_ 3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLL 79 (259)
T ss_dssp CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHH
Confidence 45678999999999999999999964 799999999988654321 1346888999999999988876
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.61 E-value=3.3e-08 Score=81.23 Aligned_cols=74 Identities=15% Similarity=0.178 Sum_probs=61.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc-c------cccCCceEEEEccCCCHHHHHHhhc-------
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-M------ESFGTYVESMAGDASNKKFLKTALR------- 162 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a-~------~~~g~~vevV~GDl~D~~sL~~AL~------- 162 (198)
+.++++|||||++.||.+++++|+++|++|.+..|+.+.. . ...+.++..+++|++|++++++.++
T Consensus 4 L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g 83 (259)
T d1ja9a_ 4 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFG 83 (259)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcC
Confidence 4678999999999999999999999999999877665432 1 1245678999999999999988774
Q ss_pred CccEEEEc
Q 029118 163 GVRSIICP 170 (198)
Q Consensus 163 GvDaVIh~ 170 (198)
+.|.+|+.
T Consensus 84 ~idilinn 91 (259)
T d1ja9a_ 84 GLDFVMSN 91 (259)
T ss_dssp CEEEEECC
T ss_pred CCcEEEec
Confidence 68999987
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.61 E-value=5.6e-08 Score=82.46 Aligned_cols=100 Identities=9% Similarity=0.037 Sum_probs=72.4
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc------------cccCCceEEEEccCCCHHHHHHhh--
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM------------ESFGTYVESMAGDASNKKFLKTAL-- 161 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~------------~~~g~~vevV~GDl~D~~sL~~AL-- 161 (198)
+..++++|||||++.||+.++++|.++|++|.+..|+.+... ...+.....+..|+.|.+.+++++
T Consensus 4 ~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 83 (302)
T d1gz6a_ 4 RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKT 83 (302)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHH
T ss_pred CcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHH
Confidence 356789999999999999999999999999999877653211 011122345677888877766554
Q ss_pred -----cCccEEEEcC------------------------hhH------HHHHHHhCCCCeEEEEcccce
Q 029118 162 -----RGVRSIICPS------------------------EGF------ISNAGSLKGVQHVILLSQGAV 195 (198)
Q Consensus 162 -----~GvDaVIh~a------------------------~G~------lldAA~~~GVkRiV~vSS~~V 195 (198)
.++|.+|+.+ .+. ++..+++++-.|||++||.+.
T Consensus 84 ~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~ 152 (302)
T d1gz6a_ 84 ALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASG 152 (302)
T ss_dssp HHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHH
T ss_pred HHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhh
Confidence 4789999872 011 345566777789999999754
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.60 E-value=5.1e-09 Score=86.15 Aligned_cols=96 Identities=10% Similarity=0.010 Sum_probs=68.8
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhh-------cCccEEEEcC--
Q 029118 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL-------RGVRSIICPS-- 171 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL-------~GvDaVIh~a-- 171 (198)
+.|||||++.||+.++++|.++|++|.+..|+.+...+.......+++.|++|.+++++++ -.+|.+|+.+
T Consensus 2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNAg~ 81 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIF 81 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCcC
Confidence 7899999999999999999999999999998876543322112234456777766655544 4789999751
Q ss_pred ------------h-----------hH------HHHHHHhCCCCeEEEEccccee
Q 029118 172 ------------E-----------GF------ISNAGSLKGVQHVILLSQGAVV 196 (198)
Q Consensus 172 ------------~-----------G~------lldAA~~~GVkRiV~vSS~~Vy 196 (198)
+ +. ++..+++++-.+||++||.+.+
T Consensus 82 ~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~ 135 (252)
T d1zmta1 82 APEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPF 135 (252)
T ss_dssp CCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTT
T ss_pred CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccc
Confidence 0 11 3444566777899999997654
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.57 E-value=9.7e-08 Score=78.71 Aligned_cols=75 Identities=9% Similarity=0.107 Sum_probs=62.6
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc-c------cccCCceEEEEccCCCHHHHHHhh-------
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-M------ESFGTYVESMAGDASNKKFLKTAL------- 161 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a-~------~~~g~~vevV~GDl~D~~sL~~AL------- 161 (198)
...++++|||||++.||+.++++|+++|++|.+..|+.+.. . ...+..+.++++|++|++++.+.+
T Consensus 15 sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~ 94 (272)
T d1g0oa_ 15 SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIF 94 (272)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHh
Confidence 46789999999999999999999999999999998876432 1 123567899999999999988876
Q ss_pred cCccEEEEc
Q 029118 162 RGVRSIICP 170 (198)
Q Consensus 162 ~GvDaVIh~ 170 (198)
.++|.+|+.
T Consensus 95 g~idilV~n 103 (272)
T d1g0oa_ 95 GKLDIVCSN 103 (272)
T ss_dssp SCCCEEEEC
T ss_pred CCCCccccc
Confidence 367999987
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=98.55 E-value=1.1e-07 Score=77.48 Aligned_cols=75 Identities=11% Similarity=0.081 Sum_probs=60.1
Q ss_pred cCCCCeEEEEcCCC--hHHHHHHHHHHHCCCcEEEEEeCCcccc-----cccCCceEEEEccCCCHHHHHHhhc------
Q 029118 96 EEARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKRNAM-----ESFGTYVESMAGDASNKKFLKTALR------ 162 (198)
Q Consensus 96 ~~~~~~ILVTGATG--fIG~~Vvr~Ll~~G~~VralvR~~~~a~-----~~~g~~vevV~GDl~D~~sL~~AL~------ 162 (198)
+..++++|||||+| -||+.++++|+++|++|.+..|+.+... ...+.....++.|++|+++++++++
T Consensus 5 ~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (256)
T d1ulua_ 5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAF 84 (256)
T ss_dssp CCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhc
Confidence 46789999999998 6999999999999999987777654321 1123457889999999999888763
Q ss_pred -CccEEEEc
Q 029118 163 -GVRSIICP 170 (198)
Q Consensus 163 -GvDaVIh~ 170 (198)
++|.+||+
T Consensus 85 g~iDilVnn 93 (256)
T d1ulua_ 85 GGLDYLVHA 93 (256)
T ss_dssp SSEEEEEEC
T ss_pred CCceEEEec
Confidence 68999986
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.55 E-value=1.2e-07 Score=76.64 Aligned_cols=68 Identities=15% Similarity=0.172 Sum_probs=49.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHh-------hc--CccEEEE
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-------LR--GVRSIIC 169 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~A-------L~--GvDaVIh 169 (198)
+++||||||+|.||+.++++|+++|++|.++.|+..... .....+..|..+.+..+.. +. .+|.+||
T Consensus 2 gK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~lIn 77 (236)
T d1dhra_ 2 ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILC 77 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc----cccceeecccCcHHHHHHHHHHHHHHhCCCCceEEEE
Confidence 689999999999999999999999999999988664321 1233445555555444332 22 4799998
Q ss_pred c
Q 029118 170 P 170 (198)
Q Consensus 170 ~ 170 (198)
+
T Consensus 78 n 78 (236)
T d1dhra_ 78 V 78 (236)
T ss_dssp C
T ss_pred C
Confidence 7
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.51 E-value=5.5e-07 Score=72.54 Aligned_cols=75 Identities=17% Similarity=0.147 Sum_probs=60.2
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc---cccCCceEEEEccCCCHHHHHHhh-------cCcc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTAL-------RGVR 165 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~---~~~g~~vevV~GDl~D~~sL~~AL-------~GvD 165 (198)
...++.+|||||++.||+.++++|.++|++|.++.|+.+... +.++........|+.+...++... ...|
T Consensus 2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (248)
T d2o23a1 2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVD 81 (248)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCccccccccccccccccccccccccccccc
Confidence 356889999999999999999999999999999999887643 234567888999999987776554 3456
Q ss_pred EEEEc
Q 029118 166 SIICP 170 (198)
Q Consensus 166 aVIh~ 170 (198)
.+++.
T Consensus 82 ~~~~~ 86 (248)
T d2o23a1 82 VAVNC 86 (248)
T ss_dssp EEEEC
T ss_pred ccccc
Confidence 66653
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=98.50 E-value=1.5e-07 Score=75.86 Aligned_cols=67 Identities=12% Similarity=0.183 Sum_probs=50.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHh-------h--cCccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-------L--RGVRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~A-------L--~GvDaVIh~ 170 (198)
.+||||||++.||+.++++|+++|++|.++.|++.... .....+.+|..+.+..... + ..+|.+|++
T Consensus 3 gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~linn 78 (235)
T d1ooea_ 3 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA----DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCV 78 (235)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS----SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc----cccceeccccCchhHHHHHHHHHHHHhcCCCeeEEEEC
Confidence 47999999999999999999999999999999875422 1234556677665554432 2 347999987
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=98.35 E-value=2.5e-06 Score=64.31 Aligned_cols=72 Identities=19% Similarity=0.329 Sum_probs=61.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc----ccccCCceEEEEccCCCHHHHHHh-hcCccEEEEc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA----MESFGTYVESMAGDASNKKFLKTA-LRGVRSIICP 170 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a----~~~~g~~vevV~GDl~D~~sL~~A-L~GvDaVIh~ 170 (198)
++..|+|.|. |.+|+.++++|.++|++|.++..++++. ......++.++.||.+|++.|++| ++.+++||.+
T Consensus 2 ~knHiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~ 78 (153)
T d1id1a_ 2 RKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILAL 78 (153)
T ss_dssp CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEEC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcchHHHHHhccccCCEEEEc
Confidence 4667999998 8999999999999999999999888642 233456799999999999999877 5788999987
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=98.28 E-value=6.1e-07 Score=72.29 Aligned_cols=74 Identities=9% Similarity=0.057 Sum_probs=58.7
Q ss_pred CCCCeEEEEcCCC--hHHHHHHHHHHHCCCcEEEEEeCCccc----ccccCCceEEEEccCCCHHHHHHhh---------
Q 029118 97 EARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKRNA----MESFGTYVESMAGDASNKKFLKTAL--------- 161 (198)
Q Consensus 97 ~~~~~ILVTGATG--fIG~~Vvr~Ll~~G~~VralvR~~~~a----~~~~g~~vevV~GDl~D~~sL~~AL--------- 161 (198)
..++++|||||+| .||++++++|.++|++|.+..|+.++. .+..+.....++.|+++++++..++
T Consensus 4 l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~ 83 (268)
T d2h7ma1 4 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGA 83 (268)
T ss_dssp TTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCT
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhcccc
Confidence 3578999999876 499999999999999999999987653 2445667889999999987666553
Q ss_pred -cCccEEEEc
Q 029118 162 -RGVRSIICP 170 (198)
Q Consensus 162 -~GvDaVIh~ 170 (198)
...|.++++
T Consensus 84 ~~~ld~~i~~ 93 (268)
T d2h7ma1 84 GNKLDGVVHS 93 (268)
T ss_dssp TCCEEEEEEC
T ss_pred CCCcceeeec
Confidence 235888876
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=98.28 E-value=1.1e-06 Score=71.30 Aligned_cols=74 Identities=9% Similarity=-0.030 Sum_probs=60.0
Q ss_pred CCCCeEEEEcCCC--hHHHHHHHHHHHCCCcEEEEEeCCcccc-----cccCCceEEEEccCCCHHHHHHhh-------c
Q 029118 97 EARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKRNAM-----ESFGTYVESMAGDASNKKFLKTAL-------R 162 (198)
Q Consensus 97 ~~~~~ILVTGATG--fIG~~Vvr~Ll~~G~~VralvR~~~~a~-----~~~g~~vevV~GDl~D~~sL~~AL-------~ 162 (198)
..++++|||||+| -||+.++++|+++|++|.+..|+.+... ...+....+++.|+++...+.+++ .
T Consensus 3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g 82 (274)
T d2pd4a1 3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG 82 (274)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcC
Confidence 4578999999988 6999999999999999999999864221 112456788999999998888776 4
Q ss_pred CccEEEEc
Q 029118 163 GVRSIICP 170 (198)
Q Consensus 163 GvDaVIh~ 170 (198)
.+|.+|++
T Consensus 83 ~id~lV~n 90 (274)
T d2pd4a1 83 SLDFIVHS 90 (274)
T ss_dssp CEEEEEEC
T ss_pred CCCeEEee
Confidence 67889886
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.22 E-value=1.8e-06 Score=64.31 Aligned_cols=71 Identities=10% Similarity=0.058 Sum_probs=59.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccccc--CCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~--g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
.++|||.|| |++|+++++.|.++||+|++..|+.+++.... .........+..+...+...+...|.++.+
T Consensus 2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~ 74 (182)
T d1e5qa1 2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISL 74 (182)
T ss_dssp CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHTTSSEEEEC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccccccccchhhhHhhhhccceeEee
Confidence 478999987 99999999999999999999999998765432 234556667888888999999999999876
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=98.19 E-value=1.7e-06 Score=68.31 Aligned_cols=56 Identities=23% Similarity=0.358 Sum_probs=48.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhh
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL 161 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL 161 (198)
|++|||||++.||++++++|.++|++|.+..|+.+.. ....+.+|+.+......+.
T Consensus 2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~------~~~~~~~d~~~~~~~~~~~ 57 (241)
T d1uaya_ 2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRREGE------DLIYVEGDVTREEDVRRAV 57 (241)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCSS------SSEEEECCTTCHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcccc------cceEeeccccchhhhHHHH
Confidence 6899999999999999999999999999999987642 3567889999988777765
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=98.14 E-value=4.1e-06 Score=64.67 Aligned_cols=94 Identities=13% Similarity=0.065 Sum_probs=56.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC-C---cEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc-Chh
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKR-T---RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-SEG 173 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G-~---~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~-a~G 173 (198)
+++|.|.||||++|+.+++.|+++. + +++++.++...........-+...-+..+. .++.++|.+|++ ..+
T Consensus 1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~~~~~~~~~~~~~----~~~~~~DivF~a~~~~ 76 (146)
T d1t4ba1 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAFDL----EALKALDIIVTCQGGD 76 (146)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTCCCBCEETTCH----HHHHTCSEEEECSCHH
T ss_pred CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccccCCceeeecccch----hhhhcCcEEEEecCch
Confidence 4689999999999999999888753 3 566676554332111001112222233443 346899999988 333
Q ss_pred H---HHHHHHhCCCCeEEEEcccceec
Q 029118 174 F---ISNAGSLKGVQHVILLSQGAVVC 197 (198)
Q Consensus 174 ~---lldAA~~~GVkRiV~vSS~~Vy~ 197 (198)
. +...+.++|.+-+ .++..+.||
T Consensus 77 ~s~~~~~~~~~~g~~~~-VID~Ss~fR 102 (146)
T d1t4ba1 77 YTNEIYPKLRESGWQGY-WIDAASSLR 102 (146)
T ss_dssp HHHHHHHHHHHTTCCCE-EEECSSTTT
T ss_pred HHHHhhHHHHhcCCCee-cccCCcccc
Confidence 2 5666677776533 344444444
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=98.06 E-value=8.2e-06 Score=64.91 Aligned_cols=61 Identities=15% Similarity=0.185 Sum_probs=47.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhh--------cCccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL--------RGVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL--------~GvDaVIh~ 170 (198)
++.||||||++.||+.++++|.++|++|.++.|+.... ..|+.+......+. ..+|.+++.
T Consensus 1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~~-----------~~d~~~~~~~~~~~~~~~~~~~~~id~lv~~ 69 (257)
T d1fjha_ 1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV-----------IADLSTAEGRKQAIADVLAKCSKGMDGLVLC 69 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSE-----------ECCTTSHHHHHHHHHHHHTTCTTCCSEEEEC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHHH-----------HHHhcCHHHHHHHHHHHHHHhCCCCcEEEEc
Confidence 57899999999999999999999999999999876432 23566655544432 357999876
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.03 E-value=1.4e-06 Score=64.23 Aligned_cols=38 Identities=18% Similarity=0.204 Sum_probs=35.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM 137 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~ 137 (198)
|+|.|+||+|.+|+.+++.|.++||+|.+..|+++++.
T Consensus 1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~ 38 (212)
T d1jaya_ 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAE 38 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHH
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence 68999999999999999999999999999999987643
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=97.97 E-value=7.7e-06 Score=65.56 Aligned_cols=74 Identities=9% Similarity=0.030 Sum_probs=58.0
Q ss_pred CCCCeEEEEcCCC--hHHHHHHHHHHHCCCcEEEEEeCCccccc-----ccCCceEEEEccCCCHHHHHHhh-------c
Q 029118 97 EARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKRNAME-----SFGTYVESMAGDASNKKFLKTAL-------R 162 (198)
Q Consensus 97 ~~~~~ILVTGATG--fIG~~Vvr~Ll~~G~~VralvR~~~~a~~-----~~g~~vevV~GDl~D~~sL~~AL-------~ 162 (198)
..++++|||||+| -||+++++.|+++|++|.+..|+.+.... ........+..|+.+..+..+.+ .
T Consensus 3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (258)
T d1qsga_ 3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP 82 (258)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhccc
Confidence 4678999999999 79999999999999999999998653211 11235678899999988877776 3
Q ss_pred CccEEEEc
Q 029118 163 GVRSIICP 170 (198)
Q Consensus 163 GvDaVIh~ 170 (198)
..|.+||.
T Consensus 83 ~~d~~v~~ 90 (258)
T d1qsga_ 83 KFDGFVHS 90 (258)
T ss_dssp SEEEEEEC
T ss_pred ccceEEEe
Confidence 45788876
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=97.89 E-value=1.2e-05 Score=64.04 Aligned_cols=71 Identities=17% Similarity=0.191 Sum_probs=52.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc--------cccCCceEEEEccCCCH----HHHHH-------h
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM--------ESFGTYVESMAGDASNK----KFLKT-------A 160 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~--------~~~g~~vevV~GDl~D~----~sL~~-------A 160 (198)
++.|||||++.||+.++++|+++|++|.+..|+.++.. ...+..+..++.|..+. +.+.+ .
T Consensus 2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (266)
T d1mxha_ 2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA 81 (266)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence 46799999999999999999999999999999876431 11234566666666542 22322 3
Q ss_pred hcCccEEEEc
Q 029118 161 LRGVRSIICP 170 (198)
Q Consensus 161 L~GvDaVIh~ 170 (198)
+.++|.+|+.
T Consensus 82 ~g~iDilvnn 91 (266)
T d1mxha_ 82 FGRCDVLVNN 91 (266)
T ss_dssp HSCCCEEEEC
T ss_pred hCCCCEEEEC
Confidence 3578999986
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=97.89 E-value=1.4e-05 Score=64.53 Aligned_cols=72 Identities=7% Similarity=-0.034 Sum_probs=52.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc--------cccCCceEE-----------------EEccCCC
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM--------ESFGTYVES-----------------MAGDASN 153 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~--------~~~g~~vev-----------------V~GDl~D 153 (198)
.+..|||||++.||+.++++|.++|++|.+..|+.+... ...+..... ...|+++
T Consensus 2 ~pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~ 81 (284)
T d1e7wa_ 2 VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTL 81 (284)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCC
Confidence 456899999999999999999999999999887653211 112223333 4456888
Q ss_pred HHHHHHhh-------cCccEEEEc
Q 029118 154 KKFLKTAL-------RGVRSIICP 170 (198)
Q Consensus 154 ~~sL~~AL-------~GvDaVIh~ 170 (198)
.+.+++++ ..+|.+|+.
T Consensus 82 ~~~v~~~~~~~~~~~G~iDiLVnn 105 (284)
T d1e7wa_ 82 FTRCAELVAACYTHWGRCDVLVNN 105 (284)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred HHHHHHHHHHHHHHhCCCCEEEec
Confidence 88887765 478999986
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=97.86 E-value=1.9e-06 Score=64.34 Aligned_cols=66 Identities=11% Similarity=0.063 Sum_probs=46.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc--cCCce--EEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--FGTYV--ESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~--~g~~v--evV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
|+|+|.|+ |.+|..++..|.+.||+|.++.|+++..... .+... ........+ .+++..+|.||++
T Consensus 1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~D~iii~ 70 (167)
T d1ks9a2 1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTAND----PDFLATSDLLLVT 70 (167)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESC----HHHHHTCSEEEEC
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHhhhhccccCCccccccccccch----hhhhcccceEEEe
Confidence 68999999 9999999999999999999999988765321 11111 111111123 3456789999988
|
| >d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Vibrio cholerae [TaxId: 666]
Probab=97.83 E-value=6.5e-05 Score=57.99 Aligned_cols=88 Identities=15% Similarity=0.148 Sum_probs=53.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC-C---cEEEEEeCCccccc-ccCCceEEEEccCCCHHHHHHhhcCccEEEEc-Chh
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKR-T---RIKALVKDKRNAME-SFGTYVESMAGDASNKKFLKTALRGVRSIICP-SEG 173 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G-~---~VralvR~~~~a~~-~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~-a~G 173 (198)
|+|.|.||||++|+.+++.|+++. | ++..+..+...-+. .+.. -+...-+..|. ..++++|.||.+ ..+
T Consensus 1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~~~~~~-~~~~~~~~~~~----~~~~~~DvvF~alp~~ 75 (147)
T d1mb4a1 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAPNFGK-DAGMLHDAFDI----ESLKQLDAVITCQGGS 75 (147)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBCCCSSS-CCCBCEETTCH----HHHTTCSEEEECSCHH
T ss_pred CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccccccccccCC-cceeeecccch----hhhccccEEEEecCch
Confidence 579999999999999999888754 3 45555433221111 1111 11122233343 346899999988 333
Q ss_pred H---HHHHHHhCCCCe-EEEEcc
Q 029118 174 F---ISNAGSLKGVQH-VILLSQ 192 (198)
Q Consensus 174 ~---lldAA~~~GVkR-iV~vSS 192 (198)
. +.....++|.+- +|=+|+
T Consensus 76 ~s~~~~~~l~~~g~~~~VIDlSs 98 (147)
T d1mb4a1 76 YTEKVYPALRQAGWKGYWIDAAS 98 (147)
T ss_dssp HHHHHHHHHHHTTCCSEEEESSS
T ss_pred HHHHHhHHHHHcCCceEEEeCCc
Confidence 3 666777888763 444554
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=97.83 E-value=1.1e-05 Score=62.12 Aligned_cols=73 Identities=12% Similarity=0.084 Sum_probs=53.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
.++++|||+||+|-+|...+..+...|.+|.+.++++++.......+++.+ .|..+...-....+|+|.||-+
T Consensus 26 ~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~lGa~~~-i~~~~~~~~~~~~~g~D~v~d~ 98 (171)
T d1iz0a2 26 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEA-ATYAEVPERAKAWGGLDLVLEV 98 (171)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEE-EEGGGHHHHHHHTTSEEEEEEC
T ss_pred CCCCEEEEEeccccchhhhhhhhccccccccccccccccccccccccccee-eehhhhhhhhhccccccccccc
Confidence 467899999999999999999999999999999998766532222223332 2455544444556899999987
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.82 E-value=2.3e-05 Score=59.88 Aligned_cols=90 Identities=16% Similarity=0.140 Sum_probs=60.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc--ccCCceEEEEccCCCHHHHHHhh-----cCccEEEEc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASNKKFLKTAL-----RGVRSIICP 170 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~--~~g~~vevV~GDl~D~~sL~~AL-----~GvDaVIh~ 170 (198)
++++|||+||+|-+|...+..+...|.+|.++++++++... .+|. .+++ |..+++..++.. +++|.||.+
T Consensus 28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~~~Ga-~~vi--~~~~~~~~~~i~~~t~~~g~d~v~d~ 104 (174)
T d1yb5a2 28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGA-HEVF--NHREVNYIDKIKKYVGEKGIDIIIEM 104 (174)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC-SEEE--ETTSTTHHHHHHHHHCTTCEEEEEES
T ss_pred CCCEEEEEeccccccccccccccccCcccccccccccccccccccCc-cccc--ccccccHHHHhhhhhccCCceEEeec
Confidence 56789999999999999999999999999999987765432 2332 2333 666655444432 468999988
Q ss_pred ChhH----HHHHHHhCCCCeEEEEcc
Q 029118 171 SEGF----ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 171 a~G~----lldAA~~~GVkRiV~vSS 192 (198)
..+. .+++++.. .|+|.+..
T Consensus 105 ~g~~~~~~~~~~l~~~--G~iv~~G~ 128 (174)
T d1yb5a2 105 LANVNLSKDLSLLSHG--GRVIVVGS 128 (174)
T ss_dssp CHHHHHHHHHHHEEEE--EEEEECCC
T ss_pred ccHHHHHHHHhccCCC--CEEEEEec
Confidence 4332 33443333 46776643
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=97.79 E-value=3.4e-05 Score=56.44 Aligned_cols=67 Identities=19% Similarity=0.275 Sum_probs=56.1
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHh-hcCccEEEEc
Q 029118 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICP 170 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~A-L~GvDaVIh~ 170 (198)
-|+|.|. |.+|+.+++.| ++++|.++..+++........++.++.||.+|++.|++| ++.++++|.+
T Consensus 2 HivI~G~-g~~g~~l~~~L--~~~~i~vi~~d~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~ 69 (129)
T d2fy8a1 2 HVVICGW-SESTLECLREL--RGSEVFVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVN 69 (129)
T ss_dssp CEEEESC-CHHHHHHHHTS--CGGGEEEEESCTTHHHHHHHTTCEEEESCTTSHHHHHHTTCTTCSEEEEC
T ss_pred EEEEECC-CHHHHHHHHHH--cCCCCEEEEcchHHHHHHHhcCccccccccCCHHHHHHhhhhcCcEEEEe
Confidence 4778875 88999999998 578899999888766554456799999999999999987 5789999987
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=97.72 E-value=1.1e-05 Score=62.15 Aligned_cols=75 Identities=11% Similarity=0.051 Sum_probs=52.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc--ccCCceEEEEccCCCHHHHHHhh--cCccEEEEcC
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASNKKFLKTAL--RGVRSIICPS 171 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~--~~g~~vevV~GDl~D~~sL~~AL--~GvDaVIh~a 171 (198)
.++++|||+||+|.+|+.++......|.+|.+++|++++... ..+...-+..-|-...+.+.+.. +|+|.||.+.
T Consensus 28 ~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~~~~~~~~Gvd~v~D~v 106 (182)
T d1v3va2 28 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNV 106 (182)
T ss_dssp CSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEESS
T ss_pred CCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHhhhhhhhcccccccHHHHHHHHhhcCCCceeEEec
Confidence 457899999999999999999999999999999998766432 23322222223333334443333 6799999883
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.68 E-value=3.6e-05 Score=58.53 Aligned_cols=91 Identities=16% Similarity=0.131 Sum_probs=59.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHH---HHHhh--cCccEEEEcCh
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKF---LKTAL--RGVRSIICPSE 172 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~s---L~~AL--~GvDaVIh~a~ 172 (198)
++++|||+||+|.+|..++..+...|.+|.+.++++++.......+++.+ .|..+++. +.+.. +|+|.||.+..
T Consensus 25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~~~Ga~~v-i~~~~~~~~~~v~~~t~~~g~d~v~d~~g 103 (183)
T d1pqwa_ 25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEYV-GDSRSVDFADEILELTDGYGVDVVLNSLA 103 (183)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSEE-EETTCSTHHHHHHHHTTTCCEEEEEECCC
T ss_pred CCCEEEEECCCCCcccccchhhccccccceeeeccccccccccccccccc-ccCCccCHHHHHHHHhCCCCEEEEEeccc
Confidence 46799999999999999999998899999999988765432222233332 24455433 33333 57999998832
Q ss_pred hH----HHHHHHhCCCCeEEEEc
Q 029118 173 GF----ISNAGSLKGVQHVILLS 191 (198)
Q Consensus 173 G~----lldAA~~~GVkRiV~vS 191 (198)
+- .+++++.. .|+|.+.
T Consensus 104 ~~~~~~~~~~l~~~--G~~v~~G 124 (183)
T d1pqwa_ 104 GEAIQRGVQILAPG--GRFIELG 124 (183)
T ss_dssp THHHHHHHHTEEEE--EEEEECS
T ss_pred chHHHHHHHHhcCC--CEEEEEc
Confidence 22 34444433 4677664
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=97.63 E-value=7.4e-05 Score=56.14 Aligned_cols=70 Identities=16% Similarity=0.054 Sum_probs=49.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccccc--------CCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--------GTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~--------g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
++|.|.|| |.+|..++..|..+||+|.++.|++++..... .+..+...........+.++++++|.||.+
T Consensus 2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii~ 79 (184)
T d1bg6a2 2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIV 79 (184)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEEC
T ss_pred CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEEE
Confidence 68999998 99999999999999999999999875532211 111122222221223467899999999987
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=97.59 E-value=0.00025 Score=49.39 Aligned_cols=84 Identities=11% Similarity=0.111 Sum_probs=61.8
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc-ccccCCceEEEEccCCCHHHHHHhhcCccEEEEc-C--
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-MESFGTYVESMAGDASNKKFLKTALRGVRSIICP-S-- 171 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a-~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~-a-- 171 (198)
+..+++|+|.|. |-.|..+++.|.++|++|.+...+.... ...+...+++..+... ...+.++|.||.. .
T Consensus 2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~d~vi~SPGi~ 75 (93)
T d2jfga1 2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPEAVERHTGSLN-----DEWLMAADLIVASPGIA 75 (93)
T ss_dssp CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTTGGGSCTTSCEEESBCC-----HHHHHHCSEEEECTTSC
T ss_pred CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchhHHHHhhccceeecccc-----hhhhccCCEEEECCCCC
Confidence 346778999998 8899999999999999999998755432 2334455667766643 2345678999875 2
Q ss_pred -hhHHHHHHHhCCCC
Q 029118 172 -EGFISNAGSLKGVQ 185 (198)
Q Consensus 172 -~G~lldAA~~~GVk 185 (198)
...++..|+++|++
T Consensus 76 ~~~~~~~~a~~~gi~ 90 (93)
T d2jfga1 76 LAHPSLSAAADAGIE 90 (93)
T ss_dssp TTSHHHHHHHHTTCE
T ss_pred CCCHHHHHHHHcCCC
Confidence 33488889999976
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=97.54 E-value=2.3e-05 Score=59.63 Aligned_cols=72 Identities=10% Similarity=0.162 Sum_probs=51.8
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc--cCCceEEEEccCCCHHHHH---Hhh--cCccEEEE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--FGTYVESMAGDASNKKFLK---TAL--RGVRSIIC 169 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~--~g~~vevV~GDl~D~~sL~---~AL--~GvDaVIh 169 (198)
.++++|||+||+|.+|..++..+...|.+|.+.++++++.... +|. -+++ |..+++..+ +.. .++|.|+.
T Consensus 27 ~~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~lGa-~~vi--~~~~~d~~~~v~~~t~g~g~d~v~d 103 (179)
T d1qora2 27 KPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGA-WQVI--NYREEDLVERLKEITGGKKVRVVYD 103 (179)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTC-SEEE--ETTTSCHHHHHHHHTTTCCEEEEEE
T ss_pred CCCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHhcCC-eEEE--ECCCCCHHHHHHHHhCCCCeEEEEe
Confidence 3567999999999999999998888999999999988764322 342 2333 566644433 333 46799888
Q ss_pred cC
Q 029118 170 PS 171 (198)
Q Consensus 170 ~a 171 (198)
+.
T Consensus 104 ~~ 105 (179)
T d1qora2 104 SV 105 (179)
T ss_dssp CS
T ss_pred Cc
Confidence 73
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=97.52 E-value=0.00029 Score=51.59 Aligned_cols=85 Identities=11% Similarity=0.046 Sum_probs=63.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc--CccEEEEcC---
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPS--- 171 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~--GvDaVIh~a--- 171 (198)
....+|.|.| .|.+|+.++....+.|++|+++..+++....... -+.+.+|+.|.+.+.+... .+|.|-.=.
T Consensus 9 ~~~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~PA~~va--~~~i~~~~~d~~~l~~~~~~~~~DviT~E~EnI 85 (111)
T d1kjqa2 9 PAATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAPAMHVA--HRSHVINMLDGDALRRVVELEKPHYIVPEIEAI 85 (111)
T ss_dssp TTCCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCGGGGGS--SEEEECCTTCHHHHHHHHHHHCCSEEEECSSCS
T ss_pred CCCCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCchhhcC--CeEEECCCCCHHHHHHHHHhhCCceEEEEecCc
Confidence 3456899999 7999999999999999999999987764333322 3789999999999988764 678885432
Q ss_pred hhHHHHHHHhCCC
Q 029118 172 EGFISNAGSLKGV 184 (198)
Q Consensus 172 ~G~lldAA~~~GV 184 (198)
.-..++.+.++|+
T Consensus 86 ~~~~L~~le~~g~ 98 (111)
T d1kjqa2 86 ATDMLIQLEEEGL 98 (111)
T ss_dssp CHHHHHHHHHTTC
T ss_pred CHHHHHHHHHCCC
Confidence 1225666656554
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.51 E-value=9.8e-05 Score=56.08 Aligned_cols=88 Identities=16% Similarity=0.106 Sum_probs=51.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC---cEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc-ChhH
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRT---RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-SEGF 174 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~---~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~-a~G~ 174 (198)
.++|.|.||||++|+.+++.|.+++| ++..+..+....+......-+...-++. ...+.++|.+|.+ ..+.
T Consensus 2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i~~~~~~~~~~~~~-----~~~~~~~d~vf~a~p~~~ 76 (144)
T d2hjsa1 2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFAESSLRVGDVD-----SFDFSSVGLAFFAAAAEV 76 (144)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEETTEEEECEEGG-----GCCGGGCSEEEECSCHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCcceeeccccchhccch-----hhhhccceEEEecCCcch
Confidence 46899999999999999998876665 6776654332211110011122211211 2346789999987 3332
Q ss_pred ---HHHHHHhCCCCeEEEEcc
Q 029118 175 ---ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 175 ---lldAA~~~GVkRiV~vSS 192 (198)
+...+.++|. ++|=.|+
T Consensus 77 s~~~~~~~~~~g~-~VID~Ss 96 (144)
T d2hjsa1 77 SRAHAERARAAGC-SVIDLSG 96 (144)
T ss_dssp HHHHHHHHHHTTC-EEEETTC
T ss_pred hhhhccccccCCc-eEEeech
Confidence 5555566663 5555554
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=97.46 E-value=9.3e-05 Score=55.73 Aligned_cols=63 Identities=11% Similarity=0.081 Sum_probs=45.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCc-eEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTY-VESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~-vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
|+|.|.|+ |.+|+.+++.|.++||+|.+..|+++........+ +.... + + .++++.+|.||.+
T Consensus 1 MkI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~-~--~----~~~~~~~DiIila 64 (165)
T d2f1ka2 1 MKIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAG-Q--D----LSLLQTAKIIFLC 64 (165)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEE-S--C----GGGGTTCSEEEEC
T ss_pred CEEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceee-e--e----ccccccccccccc
Confidence 57999976 99999999999999999999999876543221111 11111 1 1 2478899999987
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=97.42 E-value=0.00018 Score=53.47 Aligned_cols=41 Identities=12% Similarity=0.198 Sum_probs=36.7
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA 136 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a 136 (198)
+...++|.|.|+.|.+|+.+++.|.++||+|.+..|++...
T Consensus 6 ~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~ 46 (152)
T d2pv7a2 6 NSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAV 46 (152)
T ss_dssp CTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGG
T ss_pred CCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccc
Confidence 45677999999999999999999999999999999887554
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.32 E-value=9.2e-05 Score=56.26 Aligned_cols=71 Identities=11% Similarity=0.111 Sum_probs=51.6
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc--ccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~--~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
.++++|+|.|+ |.+|...+..+...|.+|.++++++++... .+| ++.+.-...+.+..+....+.|.||.+
T Consensus 26 ~~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~lG--a~~~i~~~~~~~~~~~~~~~~d~vi~~ 98 (168)
T d1piwa2 26 GPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKMG--ADHYIATLEEGDWGEKYFDTFDLIVVC 98 (168)
T ss_dssp STTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHT--CSEEEEGGGTSCHHHHSCSCEEEEEEC
T ss_pred CCCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhhccC--CcEEeeccchHHHHHhhhcccceEEEE
Confidence 46789999987 999999998888889999999998876532 234 322222223445566677889999976
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=97.29 E-value=0.00067 Score=51.52 Aligned_cols=87 Identities=10% Similarity=0.189 Sum_probs=62.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCC--CcEEEEEeCCcccc---------cccCCceEEEEccCCCHHHHHHhhcCccE
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAM---------ESFGTYVESMAGDASNKKFLKTALRGVRS 166 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G--~~VralvR~~~~a~---------~~~g~~vevV~GDl~D~~sL~~AL~GvDa 166 (198)
.+++|.|.|+ |++|..++..|..+| .+|..+.++++++. ..+.....+..+|+ ++++++|.
T Consensus 4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~-------~~~~~adi 75 (146)
T d1ez4a1 4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY-------SDCKDADL 75 (146)
T ss_dssp TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG-------GGGTTCSE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH-------HHhccccE
Confidence 4679999996 999999999999987 58999998775431 11223356666664 46899999
Q ss_pred EEEcC-----hh---------------HHHHHHHhCCCCeEEEEcc
Q 029118 167 IICPS-----EG---------------FISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 167 VIh~a-----~G---------------~lldAA~~~GVkRiV~vSS 192 (198)
||.++ .+ .+++...+.+.+-+|.+-|
T Consensus 76 vvitag~~~~~g~~r~~l~~~N~~i~~~~~~~i~~~~p~aivivvt 121 (146)
T d1ez4a1 76 VVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA 121 (146)
T ss_dssp EEECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred EEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeC
Confidence 99872 11 1456667778887777655
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.28 E-value=0.00043 Score=52.62 Aligned_cols=91 Identities=18% Similarity=0.198 Sum_probs=59.9
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCC--cEEEEEeCCcccc--cccCC-ceEEEEccCCCHHHHHHhhcCccEEEEcC----
Q 029118 101 AVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAM--ESFGT-YVESMAGDASNKKFLKTALRGVRSIICPS---- 171 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~G~--~VralvR~~~~a~--~~~g~-~vevV~GDl~D~~sL~~AL~GvDaVIh~a---- 171 (198)
+|.|+||+|++|++++..|..++. +++.+..++.+.. ..... ....... ........++++++|.||.++
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~-~~~~~~~~~~~~~aDivVitag~~~ 80 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKG-YLGPEQLPDCLKGCDVVVIPAGVPR 80 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEE-EESGGGHHHHHTTCSEEEECCSCCC
T ss_pred eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCCe-EEcCCChHHHhCCCCEEEECCCcCC
Confidence 799999999999999988888775 5777776654321 11110 0111111 123456778999999999872
Q ss_pred -hh---------------HHHHHHHhCCCCeEEEEcc
Q 029118 172 -EG---------------FISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 172 -~G---------------~lldAA~~~GVkRiV~vSS 192 (198)
.| .+++++++.+.+-+|.+-|
T Consensus 81 ~~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivvt 117 (144)
T d1mlda1 81 KPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS 117 (144)
T ss_dssp CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred CCCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence 11 1667778888887777755
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=97.14 E-value=0.00036 Score=52.71 Aligned_cols=70 Identities=14% Similarity=0.166 Sum_probs=54.6
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc--cccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM--ESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~--~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
.++++|||.|+ |-+|...+..+...|.++.++.+++++.. ..++ .+. ..|..+........+++|.||.+
T Consensus 29 ~~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~~lG--ad~-~i~~~~~~~~~~~~~~~D~vid~ 100 (168)
T d1uufa2 29 GPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALG--ADE-VVNSRNADEMAAHLKSFDFILNT 100 (168)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHT--CSE-EEETTCHHHHHTTTTCEEEEEEC
T ss_pred CCCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHHhccC--CcE-EEECchhhHHHHhcCCCceeeee
Confidence 46779999986 88999999888889999999988776543 2234 222 24778888888888999999987
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=97.14 E-value=0.00066 Score=50.86 Aligned_cols=93 Identities=15% Similarity=0.107 Sum_probs=59.6
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc--cccCCceEEEEc-cCCCHHHHHHhh-----cCccEEE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM--ESFGTYVESMAG-DASNKKFLKTAL-----RGVRSII 168 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~--~~~g~~vevV~G-Dl~D~~sL~~AL-----~GvDaVI 168 (198)
.++++|+|+| +|-+|...+..+...|.+|.++++++++.. ..++....++.- .-.+...+.+.+ .|+|.||
T Consensus 25 ~~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~~ga~~~~~~~~~~~~~~~~~~~~~~~~g~g~D~vi 103 (170)
T d1e3ja2 25 QLGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTI 103 (170)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEE
T ss_pred CCCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHHcCCcEEEeccccccccchhhhhhhcccccCCceee
Confidence 3567899997 699999999999889999999999887653 223433322221 223444444443 4789999
Q ss_pred EcC--hhH---HHHHHHhCCCCeEEEEcc
Q 029118 169 CPS--EGF---ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 169 h~a--~G~---lldAA~~~GVkRiV~vSS 192 (198)
.+. ..+ .++.++.. .++|+++.
T Consensus 104 d~~g~~~~~~~a~~~~~~~--G~iv~~G~ 130 (170)
T d1e3ja2 104 DCSGNEKCITIGINITRTG--GTLMLVGM 130 (170)
T ss_dssp ECSCCHHHHHHHHHHSCTT--CEEEECSC
T ss_pred ecCCChHHHHHHHHHHhcC--CceEEEec
Confidence 873 222 34444444 47777653
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.14 E-value=0.00024 Score=55.55 Aligned_cols=70 Identities=17% Similarity=0.198 Sum_probs=46.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc--cCCceEEEEccCCCH-HHHHHhh--cCccEEEEc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--FGTYVESMAGDASNK-KFLKTAL--RGVRSIICP 170 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~--~g~~vevV~GDl~D~-~sL~~AL--~GvDaVIh~ 170 (198)
++.+|||+||+|-+|...+..+...|.+|.+.++++++.... .+.. .++ |..+. +...+.. +|+|.||-+
T Consensus 31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~lGa~-~vi--~~~~~~~~~~~~~~~~gvD~vid~ 105 (176)
T d1xa0a2 31 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAK-EVL--AREDVMAERIRPLDKQRWAAAVDP 105 (176)
T ss_dssp GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCS-EEE--ECC---------CCSCCEEEEEEC
T ss_pred CCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHhcccc-eee--ecchhHHHHHHHhhccCcCEEEEc
Confidence 356899999999999999988888999999999988765322 3322 223 22221 1222232 478999977
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=97.08 E-value=0.00032 Score=52.41 Aligned_cols=63 Identities=8% Similarity=0.004 Sum_probs=45.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
|+|.|.| .|.+|+.+++.|+++||+|.+..|++.+.......++.+. . +..++++.+|.||.+
T Consensus 1 MkIgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~------~~~e~~~~~diIi~~ 63 (152)
T d1i36a2 1 LRVGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVT-E------TSEEDVYSCPVVISA 63 (152)
T ss_dssp CEEEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTCE-E------CCHHHHHTSSEEEEC
T ss_pred CEEEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhhhccccc-c------cHHHHHhhcCeEEEE
Confidence 5788885 5999999999999999999988877655432222222221 1 245678999999987
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=97.07 E-value=0.00025 Score=57.31 Aligned_cols=38 Identities=13% Similarity=-0.010 Sum_probs=34.4
Q ss_pred cCCCCeEEEEcCCC--hHHHHHHHHHHHCCCcEEEEEeCC
Q 029118 96 EEARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDK 133 (198)
Q Consensus 96 ~~~~~~ILVTGATG--fIG~~Vvr~Ll~~G~~VralvR~~ 133 (198)
+..++++|||||+| -||+.++++|.++|++|.+..|++
T Consensus 5 ~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~ 44 (297)
T d1d7oa_ 5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVP 44 (297)
T ss_dssp CCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHH
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCch
Confidence 56789999999988 799999999999999999888864
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=97.06 E-value=0.00029 Score=48.84 Aligned_cols=39 Identities=13% Similarity=0.187 Sum_probs=35.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA 136 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a 136 (198)
+.++|||+||+|-+|...+..+...|++|.+.++++++.
T Consensus 31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~ 69 (77)
T d1o8ca2 31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTH 69 (77)
T ss_dssp GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGH
T ss_pred CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHH
Confidence 466899999999999999998888999999999988764
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.05 E-value=0.0024 Score=48.42 Aligned_cols=67 Identities=9% Similarity=0.087 Sum_probs=46.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC--CcEEEEEeCCcc--cc----c------ccCCceEEEEccCCCHHHHHHhhcCcc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRN--AM----E------SFGTYVESMAGDASNKKFLKTALRGVR 165 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G--~~VralvR~~~~--a~----~------~~g~~vevV~GDl~D~~sL~~AL~GvD 165 (198)
++|.|+||+|.+|+.++..|..++ .++..+.+++.. +. . .....+++...--.| .++++++|
T Consensus 1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d----~~~l~~aD 76 (145)
T d1hyea1 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDEN----LRIIDESD 76 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTC----GGGGTTCS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcch----HHHhccce
Confidence 579999999999999999998888 488888876532 11 0 112334443332223 35799999
Q ss_pred EEEEc
Q 029118 166 SIICP 170 (198)
Q Consensus 166 aVIh~ 170 (198)
.||.+
T Consensus 77 vVVit 81 (145)
T d1hyea1 77 VVIIT 81 (145)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 99987
|
| >d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Salmonella typhimurium [TaxId: 90371]
Probab=96.99 E-value=8.6e-05 Score=57.63 Aligned_cols=88 Identities=15% Similarity=0.067 Sum_probs=50.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHC-CCcEEEEE-eCCc-cc----cc----ccC-CceEEEEccCCCHHHHHHhhcCccE
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVK-RTRIKALV-KDKR-NA----ME----SFG-TYVESMAGDASNKKFLKTALRGVRS 166 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~-G~~Vralv-R~~~-~a----~~----~~g-~~vevV~GDl~D~~sL~~AL~GvDa 166 (198)
|++|.|.||||++|+.+++.|..+ ..++..+. +..+ .+ .. ..+ ........ . .......++|.
T Consensus 1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l~~~s~~~~aGk~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~dv 75 (179)
T d2g17a1 1 MLNTLIVGASGYAGAELVSYVNRHPHMTITALTVSAQSNDAGKLISDLHPQLKGIVDLPLQPM--S---DVRDFSADVDV 75 (179)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTCBHHHHCGGGTTTCCCBEEEE--S---CGGGTCTTCCE
T ss_pred CcEEEEECcccHHHHHHHHHHHhCCCCceEeeEeecccccccccccccccccccccccccccc--h---hhhhhhcccce
Confidence 568999999999999999999876 56776664 3211 11 11 001 01111111 1 22334678999
Q ss_pred EEEc-ChhH---HHHHHHhCCCCeEEEEcc
Q 029118 167 IICP-SEGF---ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 167 VIh~-a~G~---lldAA~~~GVkRiV~vSS 192 (198)
||.+ ..+. +.....+.| .++|=+|+
T Consensus 76 vf~alp~~~s~~~~~~~~~~~-~~vIDlSa 104 (179)
T d2g17a1 76 VFLATAHEVSHDLAPQFLQAG-CVVFDLSG 104 (179)
T ss_dssp EEECSCHHHHHHHHHHHHHTT-CEEEECSS
T ss_pred eeccccchhHHHHhhhhhhcC-ceeecccc
Confidence 9988 3333 455555555 44454553
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=96.98 E-value=0.00021 Score=55.22 Aligned_cols=39 Identities=21% Similarity=0.285 Sum_probs=34.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM 137 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~ 137 (198)
+.+|||+||+|-+|...+..+...|.+|.+.++++++..
T Consensus 24 ~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~ 62 (167)
T d1tt7a2 24 KGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAAD 62 (167)
T ss_dssp GCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHH
T ss_pred CCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHH
Confidence 446999999999999999888889999999999887754
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=96.95 E-value=0.00024 Score=54.57 Aligned_cols=70 Identities=17% Similarity=0.140 Sum_probs=53.5
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcccccccC-CceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~~~~g-~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
.+...++|||.|+ |.+|+.+++.|..+|. +|.+..|+.+++..... -+.+++ +-+.+.+++..+|.||.+
T Consensus 20 ~~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~~~-----~~~~~~~~l~~~Divi~a 91 (159)
T d1gpja2 20 GSLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAV-----RFDELVDHLARSDVVVSA 91 (159)
T ss_dssp SCCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEEC-----CGGGHHHHHHTCSEEEEC
T ss_pred CCcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcccc-----cchhHHHHhccCCEEEEe
Confidence 4567889999998 9999999999999998 58888888766543211 013333 345788899999999988
|
| >d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Thermotoga maritima [TaxId: 2336]
Probab=96.91 E-value=0.00033 Score=55.21 Aligned_cols=73 Identities=11% Similarity=0.068 Sum_probs=42.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHC-CCcEEEEEeCCcccc---cccCCceEEEEccCCCHHHHHHhhcCccEEEEc-Chh
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALRGVRSIICP-SEG 173 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~-G~~VralvR~~~~a~---~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~-a~G 173 (198)
|.+|.|.||||++|+.+++.|..+ ..++..+.-+...-. ...+....-......|++ ....++|.||.+ ..+
T Consensus 1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~~i~~~~p~~~~~~~~~~~~~~---~~~~~~dvvf~a~p~~ 77 (176)
T d1vkna1 1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSEFDPE---KVSKNCDVLFTALPAG 77 (176)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBCCCHH---HHHHHCSEEEECCSTT
T ss_pred CeEEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccCCCcccccCchhhccccccccCHh---HhccccceEEEccccH
Confidence 468999999999999999988764 456777653322111 111111111112223443 345689999988 344
Q ss_pred H
Q 029118 174 F 174 (198)
Q Consensus 174 ~ 174 (198)
.
T Consensus 78 ~ 78 (176)
T d1vkna1 78 A 78 (176)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=96.89 E-value=0.0043 Score=44.05 Aligned_cols=83 Identities=12% Similarity=0.127 Sum_probs=62.3
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc--cCCceEEEEccCCCHHHHHHhhcCccEEEEcC--
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--FGTYVESMAGDASNKKFLKTALRGVRSIICPS-- 171 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~--~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a-- 171 (198)
+..+++|||.|+ |.+|..-++.|++.|.+|+++.....+.... ...++++....+.+. -+.+++.|+.+.
T Consensus 9 ~l~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----dl~~~~lv~~at~d 82 (113)
T d1pjqa1 9 QLRDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDET-----LLDSCWLAIAATDD 82 (113)
T ss_dssp CCBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGG-----GGTTCSEEEECCSC
T ss_pred EeCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHhcCCceeeccCCCHH-----HhCCCcEEeecCCC
Confidence 567889999984 8899999999999999999998666543221 234688888887653 378899999872
Q ss_pred h---hHHHHHHHhCCC
Q 029118 172 E---GFISNAGSLKGV 184 (198)
Q Consensus 172 ~---G~lldAA~~~GV 184 (198)
. ..+.+.|++.|+
T Consensus 83 ~~~n~~i~~~a~~~~i 98 (113)
T d1pjqa1 83 DTVNQRVSDAAESRRI 98 (113)
T ss_dssp HHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcCC
Confidence 1 127778888765
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=96.86 E-value=0.0038 Score=46.86 Aligned_cols=64 Identities=17% Similarity=0.289 Sum_probs=44.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC--cEEEEEeCCcccc----cc-----cCCceEEEEccCCCHHHHHHhhcCccEE
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAM----ES-----FGTYVESMAGDASNKKFLKTALRGVRSI 167 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~--~VralvR~~~~a~----~~-----~g~~vevV~GDl~D~~sL~~AL~GvDaV 167 (198)
+++|.|.|| |++|..++-.|+.++. ++..+.++++.+. .. +........+| .++++++|.|
T Consensus 1 r~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~-------~~~~~~adiv 72 (142)
T d1y6ja1 1 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD-------YSDVKDCDVI 72 (142)
T ss_dssp CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--C-------GGGGTTCSEE
T ss_pred CCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCc-------HHHhCCCceE
Confidence 468999997 9999999999999875 7999988776532 11 11234444443 3579999999
Q ss_pred EEc
Q 029118 168 ICP 170 (198)
Q Consensus 168 Ih~ 170 (198)
+.+
T Consensus 73 vit 75 (142)
T d1y6ja1 73 VVT 75 (142)
T ss_dssp EEC
T ss_pred EEe
Confidence 987
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=96.83 E-value=0.00028 Score=53.32 Aligned_cols=63 Identities=13% Similarity=0.026 Sum_probs=44.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
|+|.|.| .|.+|+.+++.|+++||+|.+..|++++.......+... . .+..++++.+|.||.+
T Consensus 1 MkIgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~----~---~~~~e~~~~~d~ii~~ 63 (161)
T d1vpda2 1 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAET----A---STAKAIAEQCDVIITM 63 (161)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE----C---SSHHHHHHHCSEEEEC
T ss_pred CEEEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhh----c---ccHHHHHhCCCeEEEE
Confidence 5688886 599999999999999999999999887654332222222 1 1234556667777655
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.80 E-value=0.00031 Score=53.44 Aligned_cols=26 Identities=19% Similarity=0.153 Sum_probs=22.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTR 125 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~ 125 (198)
-+|.|.||||++|+.+++.|..+.++
T Consensus 2 ~kVaIvGATGyvG~eLirlL~~H~fp 27 (154)
T d2gz1a1 2 YTVAVVGATGAVGAQMIKMLEESTLP 27 (154)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCCSC
T ss_pred CEEEEECCCcHHHHHHHHHHHcCCCC
Confidence 37999999999999999988776543
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.79 E-value=0.0035 Score=47.03 Aligned_cols=92 Identities=12% Similarity=0.039 Sum_probs=61.0
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcccc--cccCCceEEEEccCCCHHHHHHhh-----cCccEEE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAM--ESFGTYVESMAGDASNKKFLKTAL-----RGVRSII 168 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~--~~~g~~vevV~GDl~D~~sL~~AL-----~GvDaVI 168 (198)
.++++|+|.|+ |-+|...+..+...|. +|.+..+++++.. ..++. -+++.-+-.++....+.+ .|+|.||
T Consensus 25 ~~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga-~~~~~~~~~~~~~~~~~~~~~~g~g~Dvvi 102 (171)
T d1pl8a2 25 TLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGA-DLVLQISKESPQEIARKVEGQLGCKPEVTI 102 (171)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC-SEEEECSSCCHHHHHHHHHHHHTSCCSEEE
T ss_pred CCCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCC-cccccccccccccccccccccCCCCceEEE
Confidence 35678999987 9999999999988998 6888888876643 22442 234445556666665555 4789999
Q ss_pred EcC--hhH---HHHHHHhCCCCeEEEEcc
Q 029118 169 CPS--EGF---ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 169 h~a--~G~---lldAA~~~GVkRiV~vSS 192 (198)
.+. ..+ .++.++.. .++|+++-
T Consensus 103 d~~G~~~~~~~a~~~~~~g--G~iv~~G~ 129 (171)
T d1pl8a2 103 ECTGAEASIQAGIYATRSG--GTLVLVGL 129 (171)
T ss_dssp ECSCCHHHHHHHHHHSCTT--CEEEECSC
T ss_pred eccCCchhHHHHHHHhcCC--CEEEEEec
Confidence 873 222 33333333 46777653
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=96.77 E-value=0.003 Score=46.93 Aligned_cols=59 Identities=14% Similarity=0.016 Sum_probs=42.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR 162 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~ 162 (198)
++|.|.|++|..|+.+.+.+.++++++.+..-.. ....... .+ |.-|++.|+.+.+.++
T Consensus 1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~-~~~~~~~--~D-VvIDFS~p~~~~~~l~ 59 (128)
T d1vm6a3 1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVN-GVEELDS--PD-VVIDFSSPEALPKTVD 59 (128)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEETT-EEEECSC--CS-EEEECSCGGGHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHhcCCCeEEEEECCC-cHHHhcc--CC-EEEEecCHHHHHHHHH
Confidence 5799999999999999999999999988775322 1111111 22 4568888888777664
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=96.72 E-value=0.0012 Score=49.24 Aligned_cols=62 Identities=16% Similarity=0.095 Sum_probs=43.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC-CcEEEEEeCCcccccccC-CceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G-~~VralvR~~~~a~~~~g-~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
|+|.+.|+ |.+|+++++.|+++| ++|.+..|++++...... .+++.. -|. ++++.+|.||.+
T Consensus 1 MkI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~~~-~~~-------~~v~~~Div~la 64 (152)
T d1yqga2 1 MNVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETS-ATL-------PELHSDDVLILA 64 (152)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEE-SSC-------CCCCTTSEEEEC
T ss_pred CEEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhcccccc-ccc-------ccccccceEEEe
Confidence 57889976 999999999999887 999999998876533211 124332 221 135667877766
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=96.71 E-value=0.0017 Score=49.34 Aligned_cols=72 Identities=13% Similarity=0.167 Sum_probs=48.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcccc--cccCCceEEEEccCCCHHHHHHhh------cCccEE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAM--ESFGTYVESMAGDASNKKFLKTAL------RGVRSI 167 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~--~~~g~~vevV~GDl~D~~sL~~AL------~GvDaV 167 (198)
.++++|||+|| |-||...+..+...|. +|.++.+++++.. ..+|. ..++.-.-.+.....+++ .|+|.|
T Consensus 27 ~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa-~~vi~~~~~~~~~~~~~i~~~~~~~g~Dvv 104 (182)
T d1vj0a2 27 FAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGA-DLTLNRRETSVEERRKAIMDITHGRGADFI 104 (182)
T ss_dssp CBTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTC-SEEEETTTSCHHHHHHHHHHHTTTSCEEEE
T ss_pred CCCCEEEEECC-Cccchhheecccccccccccccccccccccccccccc-eEEEeccccchHHHHHHHHHhhCCCCceEE
Confidence 35679999997 8999999999999997 6899998887643 22342 233322223333333322 478999
Q ss_pred EEc
Q 029118 168 ICP 170 (198)
Q Consensus 168 Ih~ 170 (198)
|.+
T Consensus 105 id~ 107 (182)
T d1vj0a2 105 LEA 107 (182)
T ss_dssp EEC
T ss_pred eec
Confidence 987
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.65 E-value=0.0037 Score=47.10 Aligned_cols=66 Identities=15% Similarity=0.174 Sum_probs=48.6
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCC--cEEEEEeCCcccc----------cccCCceEEEEccCCCHHHHHHhhcCc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAM----------ESFGTYVESMAGDASNKKFLKTALRGV 164 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~--~VralvR~~~~a~----------~~~g~~vevV~GDl~D~~sL~~AL~Gv 164 (198)
..+.+|.|+|| |++|++++..|+.++. ++..+.++++.+. ......+.+..+|+ ++++++
T Consensus 4 ~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~-------~~l~da 75 (148)
T d1ldna1 4 NGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY-------DDCRDA 75 (148)
T ss_dssp TTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG-------GGTTTC
T ss_pred CCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH-------HHhccc
Confidence 45678999997 9999999999988875 7888887765421 11123455656663 579999
Q ss_pred cEEEEc
Q 029118 165 RSIICP 170 (198)
Q Consensus 165 DaVIh~ 170 (198)
|.||.+
T Consensus 76 Dvvvit 81 (148)
T d1ldna1 76 DLVVIC 81 (148)
T ss_dssp SEEEEC
T ss_pred eeEEEe
Confidence 999987
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=96.54 E-value=0.0087 Score=45.10 Aligned_cols=84 Identities=10% Similarity=0.168 Sum_probs=56.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC--cEEEEEeCCc--ccc----c-----ccCCceEEEEccCCCHHHHHHhhcCccE
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKR--NAM----E-----SFGTYVESMAGDASNKKFLKTALRGVRS 166 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~--~VralvR~~~--~a~----~-----~~g~~vevV~GDl~D~~sL~~AL~GvDa 166 (198)
.+|.|+||+|++|++++..|..++. ++..+..+.. .+. . .+.....+..+|+ +.++|+|.
T Consensus 1 sKV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~-------~~~~~aDi 73 (142)
T d1o6za1 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGY-------EDTAGSDV 73 (142)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCG-------GGGTTCSE
T ss_pred CeEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCH-------HHhhhcCE
Confidence 3799999999999999999999885 6777664321 111 1 1344566666664 35789999
Q ss_pred EEEcC-----hh---------H------HHHHHHhCCCCeEEEE
Q 029118 167 IICPS-----EG---------F------ISNAGSLKGVQHVILL 190 (198)
Q Consensus 167 VIh~a-----~G---------~------lldAA~~~GVkRiV~v 190 (198)
||.++ .| + +.+..++.+.+-++.+
T Consensus 74 VvitaG~~~~~g~~R~dl~~~N~~I~~~i~~~i~~~~p~~i~iv 117 (142)
T d1o6za1 74 VVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLT 117 (142)
T ss_dssp EEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEE
T ss_pred EEEecccccccCCchhhHHHHHHHHHHHHHHHHHhcCCCceEEE
Confidence 99872 11 1 4555666776666554
|
| >d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain species: Pyrococcus horikoshii [TaxId: 53953]
Probab=96.53 E-value=0.0019 Score=48.06 Aligned_cols=84 Identities=15% Similarity=0.174 Sum_probs=55.6
Q ss_pred CCCeEEEEcCC---ChHHHHHHHHHHHCC-CcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc-C-
Q 029118 98 ARDAVLVTDGD---SDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-S- 171 (198)
Q Consensus 98 ~~~~ILVTGAT---GfIG~~Vvr~Ll~~G-~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~-a- 171 (198)
..++|.|.||| +..|..+++.|.+.| ++|..+ +|.. .+.+| +. ..-++.| .-..+|.++.+ .
T Consensus 7 ~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pV--nP~~-~~i~G--~~-~y~sl~d------lp~~vDlvvi~vp~ 74 (129)
T d2csua1 7 NPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPV--NIKE-EEVQG--VK-AYKSVKD------IPDEIDLAIIVVPK 74 (129)
T ss_dssp SCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEE--CSSC-SEETT--EE-CBSSTTS------CSSCCSEEEECSCH
T ss_pred CCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEe--ccCc-cccCC--eE-eecchhh------cCCCCceEEEecCh
Confidence 35689999999 999999999998766 567666 4533 22333 11 2223333 33467888876 2
Q ss_pred hh--HHHHHHHhCCCCeEEEEccc
Q 029118 172 EG--FISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 172 ~G--~lldAA~~~GVkRiV~vSS~ 193 (198)
.- .+++.|.+.|++.+|.+|+.
T Consensus 75 ~~~~~~~~~~~~~g~~~~vi~s~G 98 (129)
T d2csua1 75 RFVKDTLIQCGEKGVKGVVIITAG 98 (129)
T ss_dssp HHHHHHHHHHHHHTCCEEEECCCS
T ss_pred HHhHHHHHHHHHcCCCEEEEeccc
Confidence 21 27778888899988888763
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=96.53 E-value=0.0052 Score=49.46 Aligned_cols=70 Identities=9% Similarity=0.101 Sum_probs=51.3
Q ss_pred cCCCCeEEEEcC----------------CChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHH
Q 029118 96 EEARDAVLVTDG----------------DSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKT 159 (198)
Q Consensus 96 ~~~~~~ILVTGA----------------TGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~ 159 (198)
+..+++||||+| ||.+|.++++++..+|++|.++.-+.... .+.+++++.. .....+..
T Consensus 3 dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~---~p~~~~~~~~--~t~~~m~~ 77 (223)
T d1u7za_ 3 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLP---TPPFVKRVDV--MTALEMEA 77 (223)
T ss_dssp TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCC---CCTTEEEEEC--CSHHHHHH
T ss_pred ccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccC---ccccccccee--hhhHHHHH
Confidence 566788888875 89999999999999999999998654321 2345665543 44444444
Q ss_pred h----hcCccEEEEc
Q 029118 160 A----LRGVRSIICP 170 (198)
Q Consensus 160 A----L~GvDaVIh~ 170 (198)
+ +..+|++|++
T Consensus 78 ~~~~~~~~~D~~i~a 92 (223)
T d1u7za_ 78 AVNASVQQQNIFIGC 92 (223)
T ss_dssp HHHHHGGGCSEEEEC
T ss_pred HHHhhhccceeEeee
Confidence 4 4789999987
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=96.49 E-value=0.0055 Score=46.91 Aligned_cols=74 Identities=8% Similarity=0.043 Sum_probs=57.7
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcccccc------cC--CceEEEEccCCCHHHHHHhhcCccE
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMES------FG--TYVESMAGDASNKKFLKTALRGVRS 166 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~~~------~g--~~vevV~GDl~D~~sL~~AL~GvDa 166 (198)
+...++|||.|+ |..|+.++..|...|. ++.+..|+++..... ++ -...+...++.+.+.+.+.+..+|.
T Consensus 15 ~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di 93 (182)
T d1vi2a1 15 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADI 93 (182)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSE
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhcccce
Confidence 456789999998 7789999999999987 577778887654211 11 1244667899999999999999999
Q ss_pred EEEc
Q 029118 167 IICP 170 (198)
Q Consensus 167 VIh~ 170 (198)
||++
T Consensus 94 iIN~ 97 (182)
T d1vi2a1 94 LTNG 97 (182)
T ss_dssp EEEC
T ss_pred eccc
Confidence 9987
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.39 E-value=0.004 Score=46.25 Aligned_cols=72 Identities=8% Similarity=0.165 Sum_probs=48.0
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc--cccCCceEEEEccC-CCHHHHHHhhcCccEEEEc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM--ESFGTYVESMAGDA-SNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~--~~~g~~vevV~GDl-~D~~sL~~AL~GvDaVIh~ 170 (198)
.++++|+|.|+ |-+|...+..+...|.+|.++.+++++.. ..++. .+++.-+- ...+.+.+...|.+.+|.+
T Consensus 26 ~~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~~~Ga-~~~i~~~~~~~~~~~~~~~~g~~~~i~~ 100 (166)
T d1llua2 26 RPGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELARKLGA-SLTVNARQEDPVEAIQRDIGGAHGVLVT 100 (166)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTC-SEEEETTTSCHHHHHHHHHSSEEEEEEC
T ss_pred CCCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhhccCc-cccccccchhHHHHHHHhhcCCcccccc
Confidence 45678999986 99999999988889999999999876643 22342 23332222 2233444555677666655
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=96.38 E-value=0.01 Score=44.01 Aligned_cols=64 Identities=9% Similarity=0.005 Sum_probs=45.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC--CcEEEEEeCCccccc----------ccCCceEEEEccCCCHHHHHHhhcCccEE
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAME----------SFGTYVESMAGDASNKKFLKTALRGVRSI 167 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G--~~VralvR~~~~a~~----------~~g~~vevV~GDl~D~~sL~~AL~GvDaV 167 (198)
++|.|+|| |.+|++++..|..++ .++..+.+++..+.. .+....++... .| .++++++|.|
T Consensus 1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~----~~~~~dadvv 73 (142)
T d1guza1 1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--ND----YADTANSDIV 73 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SC----GGGGTTCSEE
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CC----HHHhcCCeEE
Confidence 57999997 999999999998887 589998887765321 11233444422 22 3578999999
Q ss_pred EEc
Q 029118 168 ICP 170 (198)
Q Consensus 168 Ih~ 170 (198)
+.+
T Consensus 74 vit 76 (142)
T d1guza1 74 IIT 76 (142)
T ss_dssp EEC
T ss_pred EEE
Confidence 987
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=96.34 E-value=0.0014 Score=49.11 Aligned_cols=75 Identities=12% Similarity=0.161 Sum_probs=48.8
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcccc--cccCCceEEEEccCCCH-HHHHHhh--cCccEEEE
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAM--ESFGTYVESMAGDASNK-KFLKTAL--RGVRSIIC 169 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~--~~~g~~vevV~GDl~D~-~sL~~AL--~GvDaVIh 169 (198)
-.+.++|+|+|++|-+|...+..+...|. +|.+..+++++.. ..++. .+++..+-.|+ +.+.+.. .++|.||.
T Consensus 25 ~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga-~~~i~~~~~~~~~~~~~~~~~~~~d~vid 103 (170)
T d1jvba2 25 LDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGA-DYVINASMQDPLAEIRRITESKGVDAVID 103 (170)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTC-SEEEETTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred CCCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCC-ceeeccCCcCHHHHHHHHhhcccchhhhc
Confidence 34567899999999999999988888884 7777877775543 22342 23443333332 2222222 46899998
Q ss_pred cC
Q 029118 170 PS 171 (198)
Q Consensus 170 ~a 171 (198)
+.
T Consensus 104 ~~ 105 (170)
T d1jvba2 104 LN 105 (170)
T ss_dssp SC
T ss_pred cc
Confidence 83
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=96.33 E-value=0.0054 Score=46.44 Aligned_cols=41 Identities=12% Similarity=0.105 Sum_probs=35.0
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM 137 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~ 137 (198)
...+++|||.|| |..++.++-.|...|.+|.++.|+++++.
T Consensus 15 ~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~ 55 (170)
T d1nyta1 15 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAE 55 (170)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHH
T ss_pred CCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHH
Confidence 445789999997 77899999999999999999999887654
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=96.32 E-value=0.0014 Score=50.94 Aligned_cols=90 Identities=10% Similarity=-0.016 Sum_probs=54.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc--CccEEEEcChhH---
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSEGF--- 174 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~--GvDaVIh~a~G~--- 174 (198)
..|||+||+|-+|...+..+...|.+|.+++|++++.......+.+.+. |..+.+. .+.+. ..|.||.+..+.
T Consensus 33 ~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~~lGad~vi-~~~~~~~-~~~l~~~~~~~vvD~Vgg~~~~ 110 (177)
T d1o89a2 33 GEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSLGASRVL-PRDEFAE-SRPLEKQVWAGAIDTVGDKVLA 110 (177)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTEEEEE-EGGGSSS-CCSSCCCCEEEEEESSCHHHHH
T ss_pred CcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHHhhcccccc-ccccHHH-HHHHHhhcCCeeEEEcchHHHH
Confidence 4799999999999999988888999999999998775432222233332 3322222 23332 347777663222
Q ss_pred -HHHHHHhCCCCeEEEEccc
Q 029118 175 -ISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 175 -lldAA~~~GVkRiV~vSS~ 193 (198)
.+++.+..| |+|.+...
T Consensus 111 ~~l~~l~~~G--riv~~G~~ 128 (177)
T d1o89a2 111 KVLAQMNYGG--CVAACGLA 128 (177)
T ss_dssp HHHHTEEEEE--EEEECCCT
T ss_pred HHHHHhcccc--ceEeeccc
Confidence 233333333 66665543
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.19 E-value=0.002 Score=48.49 Aligned_cols=38 Identities=5% Similarity=-0.004 Sum_probs=32.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM 137 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~ 137 (198)
+++|.|.| .|.+|+.+++.|+++||+|.+..|++++..
T Consensus 1 M~kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~ 38 (162)
T d3cuma2 1 MKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVD 38 (162)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHH
T ss_pred CCEEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhh
Confidence 45788885 699999999999999999999999876643
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=96.19 E-value=0.012 Score=43.70 Aligned_cols=85 Identities=19% Similarity=0.282 Sum_probs=57.2
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC--CcEEEEEeCCcccc---------cccCCceEEEEccCCCHHHHHHhhcCccEEE
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAM---------ESFGTYVESMAGDASNKKFLKTALRGVRSII 168 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G--~~VralvR~~~~a~---------~~~g~~vevV~GDl~D~~sL~~AL~GvDaVI 168 (198)
++|.|.|| |.+|.+++..|+.++ .++..+.++++++. ..+.....+..+| .++++|+|.||
T Consensus 1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~-------~~~~~~adivv 72 (140)
T d1a5za1 1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD-------YADLKGSDVVI 72 (140)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC-------GGGGTTCSEEE
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCc-------HHHhcCCCEEE
Confidence 58999997 999999998888877 47888887765432 1122345555555 35699999999
Q ss_pred EcC-----hh---------H------HHHHHHhCCCCeEEEEcc
Q 029118 169 CPS-----EG---------F------ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 169 h~a-----~G---------~------lldAA~~~GVkRiV~vSS 192 (198)
.++ .| + +.+...+.+.+-+|.+-|
T Consensus 73 itag~~~~~g~~r~dl~~~N~~I~~~i~~~i~~~~p~aivivvt 116 (140)
T d1a5za1 73 VAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVT 116 (140)
T ss_dssp ECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred EecccccCCCcchhhhhccccchHHHHHHHHHhcCCCcEEEEeC
Confidence 872 11 1 455566666666666544
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=96.14 E-value=0.0099 Score=44.83 Aligned_cols=66 Identities=17% Similarity=0.207 Sum_probs=41.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHHC---CCcEEEEEeCCcccc---ccc----CCceEEEEccCCCHHHHHHhhcCccEEEE
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVK---RTRIKALVKDKRNAM---ESF----GTYVESMAGDASNKKFLKTALRGVRSIIC 169 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~---G~~VralvR~~~~a~---~~~----g~~vevV~GDl~D~~sL~~AL~GvDaVIh 169 (198)
++|.|+||+|++|++++-.|..+ ..+++.+..++.... ... ......+.+ -.+ .++++++|.||.
T Consensus 1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~~~~~~~~~~~-~~~----~~~~~~aDvvvi 75 (145)
T d2cmda1 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSG-EDA----TPALEGADVVLI 75 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSCSSCEEEEECS-SCC----HHHHTTCSEEEE
T ss_pred CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCccccCCcEEEc-CCC----ccccCCCCEEEE
Confidence 58999999999999998776433 468888876542210 111 112222221 122 347999999998
Q ss_pred c
Q 029118 170 P 170 (198)
Q Consensus 170 ~ 170 (198)
+
T Consensus 76 t 76 (145)
T d2cmda1 76 S 76 (145)
T ss_dssp C
T ss_pred C
Confidence 7
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=96.13 E-value=0.0074 Score=46.92 Aligned_cols=66 Identities=14% Similarity=0.039 Sum_probs=40.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC---C----cEEEEEeCCcc--cc----ccc---CCce-EEEEccCCCHHHHHHhhc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKR---T----RIKALVKDKRN--AM----ESF---GTYV-ESMAGDASNKKFLKTALR 162 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G---~----~VralvR~~~~--a~----~~~---g~~v-evV~GDl~D~~sL~~AL~ 162 (198)
.+|.||||+|.||++++-.|.... . .++.+..+... +. +.. .+.. .++.++ ...++++
T Consensus 25 ~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~~-----~~~~~~~ 99 (175)
T d7mdha1 25 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGI-----DPYEVFE 99 (175)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEES-----CHHHHTT
T ss_pred cEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccccc-----cchhhcc
Confidence 379999999999999998887642 2 34444433321 11 110 1112 233332 3578999
Q ss_pred CccEEEEc
Q 029118 163 GVRSIICP 170 (198)
Q Consensus 163 GvDaVIh~ 170 (198)
++|.||.+
T Consensus 100 ~aDvVvi~ 107 (175)
T d7mdha1 100 DVDWALLI 107 (175)
T ss_dssp TCSEEEEC
T ss_pred CCceEEEe
Confidence 99999987
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.12 E-value=0.007 Score=46.28 Aligned_cols=70 Identities=9% Similarity=0.046 Sum_probs=48.2
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc--cccc----cCCc--eEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--AMES----FGTY--VESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~--a~~~----~g~~--vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
|+|.|.|| |..|..++..|..+|++|+...|+.++ .... ..+. ...-...+.-...+.++++++|.||.+
T Consensus 1 MkI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~a 78 (180)
T d1txga2 1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLG 78 (180)
T ss_dssp CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEEC
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHHhccchhhcc
Confidence 67999986 999999999999999999999985432 1110 0000 111111222345789999999999987
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=96.08 E-value=0.015 Score=43.43 Aligned_cols=73 Identities=16% Similarity=0.089 Sum_probs=46.6
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCC-CcEEEEEeCCcccccc--cCCceEEEEccCCC-HHHHHHhh--cCccEEEEc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMES--FGTYVESMAGDASN-KKFLKTAL--RGVRSIICP 170 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G-~~VralvR~~~~a~~~--~g~~vevV~GDl~D-~~sL~~AL--~GvDaVIh~ 170 (198)
.++++|||.|| |-+|...+.++...| .+|.+..+++++.... .+....+...+-.| ...+.+.. .|+|.||-+
T Consensus 27 k~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~D~vid~ 105 (176)
T d2jhfa2 27 TQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEV 105 (176)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEEC
T ss_pred CCCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCeeEEecCCchhHHHHHHHHHhcCCCCEEEec
Confidence 45679999999 558989998888887 5788888887765322 33222222223322 23333333 589999987
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=96.07 E-value=0.0086 Score=45.68 Aligned_cols=94 Identities=13% Similarity=0.091 Sum_probs=60.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcccc--cccCCceEEEE-ccCCC-HHHHHHhh--cCccEEEE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAM--ESFGTYVESMA-GDASN-KKFLKTAL--RGVRSIIC 169 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~--~~~g~~vevV~-GDl~D-~~sL~~AL--~GvDaVIh 169 (198)
.++++|+|+|+ |-+|...+..+...|. +|.++.+++++.. ..++.. .++. -|-.+ ...+.+.. .|+|.||-
T Consensus 28 ~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~-~~in~~~~~~~~~~~~~~~~g~G~d~vi~ 105 (176)
T d1d1ta2 28 KPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGAT-ECISPKDSTKPISEVLSEMTGNNVGYTFE 105 (176)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCS-EEECGGGCSSCHHHHHHHHHTSCCCEEEE
T ss_pred CCCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCc-EEECccccchHHHHHHHHhccccceEEEE
Confidence 45678999986 9999999999999994 7999998887753 223432 2221 22222 34444444 58999998
Q ss_pred cC--hhHHHHHHHhC--CCCeEEEEcc
Q 029118 170 PS--EGFISNAGSLK--GVQHVILLSQ 192 (198)
Q Consensus 170 ~a--~G~lldAA~~~--GVkRiV~vSS 192 (198)
+. ..++.+++... +-.++|++..
T Consensus 106 ~~g~~~~~~~a~~~~~~~~G~~v~vG~ 132 (176)
T d1d1ta2 106 VIGHLETMIDALASCHMNYGTSVVVGV 132 (176)
T ss_dssp CSCCHHHHHHHHTTSCTTTCEEEECSC
T ss_pred eCCchHHHHHHHHHhhcCCeEEEEEEc
Confidence 72 33444444332 3457887764
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=96.04 E-value=0.025 Score=43.34 Aligned_cols=68 Identities=9% Similarity=0.053 Sum_probs=48.0
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCC--cEEEEEeCCcccc----------cccCCceEEEEccCCCHHHHHHhhc
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAM----------ESFGTYVESMAGDASNKKFLKTALR 162 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~--~VralvR~~~~a~----------~~~g~~vevV~GDl~D~~sL~~AL~ 162 (198)
...++.+|.|.|+ |++|+.++-.|..+|. ++..+.++++.+. ...+.......+| .+.++
T Consensus 16 ~~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d-------~~~~~ 87 (160)
T d1i0za1 16 ATVPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKD-------YSVTA 87 (160)
T ss_dssp CCCCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSS-------GGGGT
T ss_pred ccCCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccc-------hhhcc
Confidence 3455679999996 9999999999999986 7888887765431 1112222233344 24599
Q ss_pred CccEEEEc
Q 029118 163 GVRSIICP 170 (198)
Q Consensus 163 GvDaVIh~ 170 (198)
++|.||++
T Consensus 88 ~adiVVit 95 (160)
T d1i0za1 88 NSKIVVVT 95 (160)
T ss_dssp TCSEEEEC
T ss_pred cccEEEEe
Confidence 99999987
|
| >d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative semialdehyde dehydrogenase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=96.04 E-value=0.0028 Score=49.21 Aligned_cols=72 Identities=13% Similarity=0.140 Sum_probs=40.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHC-CCcEEEEEeCCcccccc--cCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMES--FGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~-G~~VralvR~~~~a~~~--~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
.+.+|.|.||||++|+.+++.|..+ ..++..+.-+....... ..+.. ....+..........+.++|.||.+
T Consensus 4 ~kikVaIlGATGyvG~elirLL~~HP~~ei~~l~S~~~aG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dvvf~a 78 (183)
T d2cvoa1 4 EEVRIAVLGASGYTGAEIVRLLANHPQFRIKVMTADRKAGEQFGSVFPHL-ITQDLPNLVAVKDADFSNVDAVFCC 78 (183)
T ss_dssp SCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECSTTTTSCHHHHCGGG-TTSCCCCCBCGGGCCGGGCSEEEEC
T ss_pred CccEEEEECcccHHHHHHHHHHHhCCCceEEEEeccccCCCccccccccc-cccccccchhhhhhhhcccceeeec
Confidence 4568999999999999999988664 34566554222111100 00000 0001122222334456789999987
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=96.04 E-value=0.013 Score=44.63 Aligned_cols=94 Identities=13% Similarity=0.103 Sum_probs=56.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCc-EEEEEeCCcccc--cccCCceEEEEccCCC--HHHHHHhh--cCccEEEE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNAM--ESFGTYVESMAGDASN--KKFLKTAL--RGVRSIIC 169 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~-VralvR~~~~a~--~~~g~~vevV~GDl~D--~~sL~~AL--~GvDaVIh 169 (198)
.++++|||.|+ |-||...+..+...|.. |.+..+++++.. +.++. .+++...-.| ...+.+.. .|+|+||-
T Consensus 27 ~~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga-~~~i~~~~~~~~~~~~~~~~~~~G~d~vie 104 (174)
T d1e3ia2 27 TPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGA-TDCLNPRELDKPVQDVITELTAGGVDYSLD 104 (174)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC-SEEECGGGCSSCHHHHHHHHHTSCBSEEEE
T ss_pred CCCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhCC-CcccCCccchhhhhhhHhhhhcCCCcEEEE
Confidence 35679999975 99999999999999984 666777666542 33442 2333222222 22333332 68999998
Q ss_pred c--ChhHHHHHHHhC--CCCeEEEEcc
Q 029118 170 P--SEGFISNAGSLK--GVQHVILLSQ 192 (198)
Q Consensus 170 ~--a~G~lldAA~~~--GVkRiV~vSS 192 (198)
+ ...++-++.... |-.++|.+.-
T Consensus 105 ~~G~~~~~~~a~~~~~~g~G~~v~vG~ 131 (174)
T d1e3ia2 105 CAGTAQTLKAAVDCTVLGWGSCTVVGA 131 (174)
T ss_dssp SSCCHHHHHHHHHTBCTTTCEEEECCC
T ss_pred ecccchHHHHHHHHhhcCCeEEEecCC
Confidence 8 333343333322 2247777653
|
| >d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PH1109 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=95.97 E-value=0.01 Score=44.55 Aligned_cols=83 Identities=8% Similarity=0.021 Sum_probs=54.2
Q ss_pred CCCeEEEEcCC---ChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc-C--
Q 029118 98 ARDAVLVTDGD---SDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-S-- 171 (198)
Q Consensus 98 ~~~~ILVTGAT---GfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~-a-- 171 (198)
+.++|+|.||+ +..|..+++.|++.||+|..+ +|.. .+.+| ..+ .- ++.+.-..+|.|+.+ .
T Consensus 18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pV--nP~~-~~i~G--~~~-~~------sl~dlp~~iD~v~i~vp~~ 85 (139)
T d2d59a1 18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPV--NPKY-EEVLG--RKC-YP------SVLDIPDKIEVVDLFVKPK 85 (139)
T ss_dssp HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEE--CTTC-SEETT--EEC-BS------SGGGCSSCCSEEEECSCHH
T ss_pred cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEE--CCcc-cccCC--Ccc-cc------cccccCccceEEEEEeCHH
Confidence 35689999999 889999999999999987666 5543 23333 111 11 223334457877766 2
Q ss_pred -hhHHHHHHHhCCCCeEEEEcc
Q 029118 172 -EGFISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 172 -~G~lldAA~~~GVkRiV~vSS 192 (198)
...+++.|.+.|++.+++.+.
T Consensus 86 ~~~~~~~e~~~~g~k~v~~~~G 107 (139)
T d2d59a1 86 LTMEYVEQAIKKGAKVVWFQYN 107 (139)
T ss_dssp HHHHHHHHHHHHTCSEEEECTT
T ss_pred HHHHHHHHHHHhCCCEEEEecc
Confidence 222677777778887776543
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=95.85 E-value=0.0064 Score=44.79 Aligned_cols=73 Identities=11% Similarity=0.120 Sum_probs=49.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCC-C-HHHHHHhhcCccEEEEc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDAS-N-KKFLKTALRGVRSIICP 170 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~-D-~~sL~~AL~GvDaVIh~ 170 (198)
.++++|||.|+ |-+|...+..+...|++|.+.++++++......-+++.+...-. | ...+.+...|.+.+|..
T Consensus 26 ~~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 100 (168)
T d1rjwa2 26 KPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVT 100 (168)
T ss_dssp CTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEEES
T ss_pred CCCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhhhhcCcceecccccchhhhhcccccCCCceEEee
Confidence 46779999976 88999999999999999999998877653222222343333222 2 34456666777777765
|
| >d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PF0725 species: Pyrococcus furiosus [TaxId: 2261]
Probab=95.85 E-value=0.015 Score=42.14 Aligned_cols=80 Identities=10% Similarity=0.210 Sum_probs=52.5
Q ss_pred CeEEEEcCC---ChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc-Ch---
Q 029118 100 DAVLVTDGD---SDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-SE--- 172 (198)
Q Consensus 100 ~~ILVTGAT---GfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~-a~--- 172 (198)
++|.|.||+ +..|..+++.|++.||+|..+ +|... +.+| ..++ .++.+.-..+|.++.+ ..
T Consensus 2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pV--nP~~~-~i~G--~~~y-------~sl~~lp~~~D~vvi~vp~~~~ 69 (116)
T d1y81a1 2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPV--NPNYD-EIEG--LKCY-------RSVRELPKDVDVIVFVVPPKVG 69 (116)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEE--CTTCS-EETT--EECB-------SSGGGSCTTCCEEEECSCHHHH
T ss_pred cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEE--ccccc-cccC--cccc-------ccchhccccceEEEEEeCHHHH
Confidence 579999998 779999999999999987765 45432 2233 1111 1233344467877766 21
Q ss_pred hHHHHHHHhCCCCeEEEEc
Q 029118 173 GFISNAGSLKGVQHVILLS 191 (198)
Q Consensus 173 G~lldAA~~~GVkRiV~vS 191 (198)
..+++.|.+.|++.+++-+
T Consensus 70 ~~~l~~~~~~g~k~v~~~~ 88 (116)
T d1y81a1 70 LQVAKEAVEAGFKKLWFQP 88 (116)
T ss_dssp HHHHHHHHHTTCCEEEECT
T ss_pred HHHHHHHHhcCCceEEecc
Confidence 1267777788888776644
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=95.83 E-value=0.0031 Score=47.93 Aligned_cols=69 Identities=16% Similarity=0.150 Sum_probs=49.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCce--EEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYV--ESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~v--evV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
..|-|.|- |.+|..+++.|+++||+|.+..|++++..+....+. ....+ ....+.+..++..+|.+|.+
T Consensus 3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~-a~~~~~~~~~~~~~~~ii~~ 73 (176)
T d2pgda2 3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLG-AHSLEEMVSKLKKPRRIILL 73 (176)
T ss_dssp BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEE-CSSHHHHHHHBCSSCEEEEC
T ss_pred CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccc-hhhhhhhhhhhcccceEEEe
Confidence 45778875 999999999999999999999999977643311100 01111 45667778888888888766
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=95.81 E-value=0.0076 Score=45.46 Aligned_cols=63 Identities=13% Similarity=0.137 Sum_probs=45.7
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC--CcEEEEEeCCcccc----------cccCCceEEEEccCCCHHHHHHhhcCccEE
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAM----------ESFGTYVESMAGDASNKKFLKTALRGVRSI 167 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G--~~VralvR~~~~a~----------~~~g~~vevV~GDl~D~~sL~~AL~GvDaV 167 (198)
++|.|+|| |++|..++-.|+.+| .++..+.++++++. ...+....+..+| .++++++|.|
T Consensus 2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d-------~~~l~~adiV 73 (146)
T d1hyha1 2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIND-------WAALADADVV 73 (146)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESC-------GGGGTTCSEE
T ss_pred CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccC-------HHHhccccEE
Confidence 58999995 999999999998887 37888777665431 1122335555555 3568999999
Q ss_pred EEc
Q 029118 168 ICP 170 (198)
Q Consensus 168 Ih~ 170 (198)
|.+
T Consensus 74 Vit 76 (146)
T d1hyha1 74 IST 76 (146)
T ss_dssp EEC
T ss_pred EEe
Confidence 986
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=95.80 E-value=0.012 Score=44.55 Aligned_cols=90 Identities=17% Similarity=0.103 Sum_probs=57.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCccccc----------ccCCceEEEEccCCCHHHHHHhhcCcc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAME----------SFGTYVESMAGDASNKKFLKTALRGVR 165 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~~----------~~g~~vevV~GDl~D~~sL~~AL~GvD 165 (198)
..+++|.|.|| |.+|+.++..|...+. ++..+..+++.+.. ..+........ ...+++++++|
T Consensus 5 ~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~-----~~~~~~~~~ad 78 (154)
T d1pzga1 5 QRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE-----YSYEAALTGAD 78 (154)
T ss_dssp SCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE-----CSHHHHHTTCS
T ss_pred cCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEecc-----CchhhhhcCCC
Confidence 35678999998 9999999987777774 78877777654321 11111222211 13467899999
Q ss_pred EEEEcC-----hh--------------H------HHHHHHhCCCCeEEEEcc
Q 029118 166 SIICPS-----EG--------------F------ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 166 aVIh~a-----~G--------------~------lldAA~~~GVkRiV~vSS 192 (198)
.||.++ .| + +++...+.+.+-+|.+-|
T Consensus 79 iVvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~p~aiviivs 130 (154)
T d1pzga1 79 CVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVT 130 (154)
T ss_dssp EEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred eEEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcCCCcEEEEeC
Confidence 999862 11 0 455566777777777655
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.79 E-value=0.011 Score=45.43 Aligned_cols=69 Identities=14% Similarity=0.120 Sum_probs=48.0
Q ss_pred cccCCCCeEEEEcCCChHHHHHHHHHHHCCC--cEEEEEeCCcccc----------cccCCceEEEEccCCCHHHHHHhh
Q 029118 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAM----------ESFGTYVESMAGDASNKKFLKTAL 161 (198)
Q Consensus 94 ~~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~--~VralvR~~~~a~----------~~~g~~vevV~GDl~D~~sL~~AL 161 (198)
+....+.+|.|+|| |.+|.+++..|..+|. ++..+.++++.+. ...+.......+|+ +.+
T Consensus 14 ~~~~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~-------~~~ 85 (159)
T d2ldxa1 14 EDKLSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDY-------NVS 85 (159)
T ss_dssp CCCCCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSG-------GGG
T ss_pred cccCCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccch-------hhh
Confidence 34456678999996 9999999999988875 7888887765432 01122233334442 468
Q ss_pred cCccEEEEc
Q 029118 162 RGVRSIICP 170 (198)
Q Consensus 162 ~GvDaVIh~ 170 (198)
+++|.||.+
T Consensus 86 ~~adivvit 94 (159)
T d2ldxa1 86 ANSKLVIIT 94 (159)
T ss_dssp TTEEEEEEC
T ss_pred ccccEEEEe
Confidence 999999987
|
| >d2nu7a1 c.2.1.8 (A:2-120) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain species: Escherichia coli [TaxId: 562]
Probab=95.79 E-value=0.023 Score=42.36 Aligned_cols=85 Identities=15% Similarity=0.236 Sum_probs=57.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc--CccEEE--EcC--
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSII--CPS-- 171 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~--GvDaVI--h~a-- 171 (198)
...+|+|-|-||..|+.-++++++.|-+|.+-+.+.+.-....+ +-++ | ++++|++ |+|+=+ .+.
T Consensus 5 k~trVlvQGiTG~~G~~ht~~m~~yGT~vVaGVtPgkgG~~~~g--iPVf--~-----sV~eAv~~~~~~~SvIfVPp~~ 75 (119)
T d2nu7a1 5 KNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTTHLG--LPVF--N-----TVREAVAATGATASVIYVPAPF 75 (119)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTEEETT--EEEE--S-----SHHHHHHHHCCCEEEECCCGGG
T ss_pred CCCcEEEEcCCCcHHHHHHHHHHHhCCceEEEEccCCCCcccCC--Cchh--h-----HHHHHHHHhCCCeEEEeccHHH
Confidence 34689999999999999999999999999999965443333222 3322 2 4455553 565433 332
Q ss_pred -hhHHHHHHHhCCCCeEEEEcc
Q 029118 172 -EGFISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 172 -~G~lldAA~~~GVkRiV~vSS 192 (198)
...++||+ ++|++.+|.++-
T Consensus 76 a~dA~~EAi-~agI~~iV~ITE 96 (119)
T d2nu7a1 76 CKDSILEAI-DAGIKLIITITE 96 (119)
T ss_dssp HHHHHHHHH-HTTCSEEEECCC
T ss_pred HHHHHHHHH-HCCCCEEEEecC
Confidence 33466665 679999998763
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=95.75 E-value=0.0068 Score=46.20 Aligned_cols=72 Identities=17% Similarity=0.208 Sum_probs=47.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcccc--cccCCceEEEEc-cCCCHHHHHHhh--cCccEEEEc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAM--ESFGTYVESMAG-DASNKKFLKTAL--RGVRSIICP 170 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~--~~~g~~vevV~G-Dl~D~~sL~~AL--~GvDaVIh~ 170 (198)
.++++|||.|+ |-||...+..+...|. +|.+..+++++.. +.+|. .+++.- |-...+.+.+.. +|+|.||-+
T Consensus 26 ~~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa-~~~i~~~~~~~~~~v~~~t~g~G~D~vid~ 103 (174)
T d1jqba2 26 EMGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGA-TDILNYKNGHIEDQVMKLTNGKGVDRVIMA 103 (174)
T ss_dssp CTTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTC-SEEECGGGSCHHHHHHHHTTTSCEEEEEEC
T ss_pred CCCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHHhhCc-cccccccchhHHHHHHHHhhccCcceEEEc
Confidence 45778999986 9999999988888896 6888888776543 23442 233322 212234444544 469999987
|
| >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Escherichia coli [TaxId: 562]
Probab=95.74 E-value=0.0018 Score=50.03 Aligned_cols=33 Identities=15% Similarity=0.251 Sum_probs=26.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHC-CCcEEEEE
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALV 130 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~-G~~Vralv 130 (198)
...+|.|.||+|.+|+.|++.+.+. +.++.+..
T Consensus 3 s~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~ 36 (162)
T d1diha1 3 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAAL 36 (162)
T ss_dssp CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEE
Confidence 3458999999999999999988775 66766654
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.71 E-value=0.0073 Score=46.19 Aligned_cols=70 Identities=10% Similarity=0.085 Sum_probs=44.2
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEE-eCCcccc---cccCCceEEEEccCCCH---HHHHHhh-cCccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALV-KDKRNAM---ESFGTYVESMAGDASNK---KFLKTAL-RGVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~Vralv-R~~~~a~---~~~g~~vevV~GDl~D~---~sL~~AL-~GvDaVIh~ 170 (198)
..+|||+||+|-+|+..++.+...|.++++.+ +++++.. ..++. ..++ |..++ +.++++. +|+|+||-+
T Consensus 31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~ga-d~vi--~~~~~~~~~~~~~~~~~GvDvv~D~ 107 (187)
T d1vj1a2 31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGF-DAAV--NYKTGNVAEQLREACPGGVDVYFDN 107 (187)
T ss_dssp CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCC-SEEE--ETTSSCHHHHHHHHCTTCEEEEEES
T ss_pred CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccc-eEEe--eccchhHHHHHHHHhccCceEEEec
Confidence 36899999999999999988888898766554 4433322 12332 2333 44432 2233322 589999988
Q ss_pred C
Q 029118 171 S 171 (198)
Q Consensus 171 a 171 (198)
.
T Consensus 108 v 108 (187)
T d1vj1a2 108 V 108 (187)
T ss_dssp S
T ss_pred C
Confidence 3
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=95.65 E-value=0.028 Score=41.72 Aligned_cols=86 Identities=15% Similarity=0.088 Sum_probs=55.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCccccc----------ccCCceEEE-EccCCCHHHHHHhhcCccE
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAME----------SFGTYVESM-AGDASNKKFLKTALRGVRS 166 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~~----------~~g~~vevV-~GDl~D~~sL~~AL~GvDa 166 (198)
+++|.|.|| |.+|..++-.|..++. ++..+..+++.+.. ..+....+. .+| .++++++|.
T Consensus 1 r~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d-------~~~~~~adv 72 (142)
T d1uxja1 1 RKKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNN-------YADTANSDV 72 (142)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESC-------GGGGTTCSE
T ss_pred CCeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCc-------HHHhcCCCE
Confidence 468999997 9999999988887764 78888776654321 112223333 334 335899999
Q ss_pred EEEcC-----hh---------------HHHHHHHhCCCCeEEEEcc
Q 029118 167 IICPS-----EG---------------FISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 167 VIh~a-----~G---------------~lldAA~~~GVkRiV~vSS 192 (198)
||.++ .+ .+++...+.+.+-++.+-|
T Consensus 73 vvitag~~~~~~~~r~dl~~~N~~i~~~i~~~i~k~~p~aivivvt 118 (142)
T d1uxja1 73 IVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVN 118 (142)
T ss_dssp EEECCSCC---------CHHHHHHHHHHHHHHHGGGCTTCEEEECS
T ss_pred EEEeeeccCCcCcchhHHHhHHHHHHHHHHHHHhccCCCceEEEeC
Confidence 99872 11 1455566667777766654
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.63 E-value=0.015 Score=43.54 Aligned_cols=69 Identities=12% Similarity=0.146 Sum_probs=44.0
Q ss_pred eEEEEcCCChHHHHHHHHHHH-CCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhh-----cCccEEEEc
Q 029118 101 AVLVTDGDSDIGQMVILSLIV-KRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL-----RGVRSIICP 170 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~-~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL-----~GvDaVIh~ 170 (198)
+|.|.||+|..|+.+++.+.+ .++++.+..-..+........+.+ +.-|++.|+.+.+.+ .|+-.|+-+
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~~~~~~~~~D-vvIDFS~p~~~~~~~~~~~~~~~~~ViGT 75 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTDGNTE-VVIDFTHPDVVMGNLEFLIDNGIHAVVGT 75 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCTHHHHTTTCS-EEEECCCTTTHHHHHHHHHHTTCEEEECC
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCchhhhccccCC-EEEEcccHHHHHHHHHHHHhcCCCEEEec
Confidence 689999999999999998766 467777665322222222222233 456888887776655 355555544
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=95.62 E-value=0.011 Score=44.10 Aligned_cols=61 Identities=10% Similarity=0.041 Sum_probs=46.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc---cCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~---~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
|+|.+. |+|.+|+++++.|+++|++|.+..|++++..+. ++ +.+. . +..++++.+|.||.+
T Consensus 1 MkIg~I-G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g--~~~~----~---~~~~~~~~~dvIila 64 (152)
T d2ahra2 1 MKIGII-GVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLA--LPYA----M---SHQDLIDQVDLVILG 64 (152)
T ss_dssp CEEEEE-CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHT--CCBC----S---SHHHHHHTCSEEEEC
T ss_pred CEEEEE-eccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccc--eeee----c---hhhhhhhccceeeee
Confidence 467777 589999999999999999999999987765432 23 2221 2 346678899999877
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=95.62 E-value=0.0097 Score=44.07 Aligned_cols=36 Identities=17% Similarity=0.077 Sum_probs=28.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCc--EEEEEeCCcc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTR--IKALVKDKRN 135 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~--VralvR~~~~ 135 (198)
+++|+|.| .|.+|..+++.|.++|+. |.+..|+++.
T Consensus 1 Mk~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~~~ 38 (171)
T d2g5ca2 1 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPES 38 (171)
T ss_dssp CCEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHH
T ss_pred CCEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECChHH
Confidence 46799997 599999999999999974 5555665543
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=95.56 E-value=0.036 Score=41.49 Aligned_cols=86 Identities=14% Similarity=0.113 Sum_probs=56.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC--cEEEEEeCCccccc---------ccCCceEEEEccCCCHHHHHHhhcCccEEE
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAME---------SFGTYVESMAGDASNKKFLKTALRGVRSII 168 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~--~VralvR~~~~a~~---------~~g~~vevV~GDl~D~~sL~~AL~GvDaVI 168 (198)
.+|.|+|| |++|.+++-.|..++. ++..+.++++.+.. .+.....+...+ | .++++++|.||
T Consensus 2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~--~----~~~~~daDvVV 74 (143)
T d1llda1 2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSD--D----PEICRDADMVV 74 (143)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEES--C----GGGGTTCSEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCC--C----HHHhhCCcEEE
Confidence 47999997 9999999999999885 78888877654321 122233443332 1 24699999999
Q ss_pred EcC-----hh---------H------HHHHHHhCCCCeEEEEcc
Q 029118 169 CPS-----EG---------F------ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 169 h~a-----~G---------~------lldAA~~~GVkRiV~vSS 192 (198)
.++ .+ + ++...++.+.+-++.+-|
T Consensus 75 itaG~~~~~g~~R~dl~~~N~~i~~~i~~~i~~~~p~ai~ivvt 118 (143)
T d1llda1 75 ITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLIT 118 (143)
T ss_dssp ECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred EecccccCCCCchhhhhhhhHHHHHHHHHHHHhhCCCeEEEEeC
Confidence 872 11 1 455566677766665543
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=95.51 E-value=0.0057 Score=45.50 Aligned_cols=72 Identities=19% Similarity=0.175 Sum_probs=43.6
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCc-EEEEEeCCcccc--cccCCceEEEEc-cC-CCHHHHHHhh--cCccEEEE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNAM--ESFGTYVESMAG-DA-SNKKFLKTAL--RGVRSIIC 169 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~-VralvR~~~~a~--~~~g~~vevV~G-Dl-~D~~sL~~AL--~GvDaVIh 169 (198)
.++++|||.|+ |.+|...+..+...|.. |.+..+++++.. ..+|. .+++.- +- .+.....+.. .|+|.||.
T Consensus 27 ~~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa-~~~i~~~~~~~~~~~~~~~~~~~g~D~vid 104 (176)
T d2fzwa2 27 EPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGA-TECINPQDFSKPIQEVLIEMTDGGVDYSFE 104 (176)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTC-SEEECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred CCCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCC-cEEEeCCchhhHHHHHHHHHcCCCCcEeee
Confidence 46779999998 56899999888888865 555556665532 23442 223322 11 2222222222 68999998
Q ss_pred c
Q 029118 170 P 170 (198)
Q Consensus 170 ~ 170 (198)
+
T Consensus 105 ~ 105 (176)
T d2fzwa2 105 C 105 (176)
T ss_dssp C
T ss_pred c
Confidence 7
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=95.29 E-value=0.027 Score=42.60 Aligned_cols=94 Identities=15% Similarity=0.057 Sum_probs=56.4
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcccc--cccCCceEEEEccCCC--HHHHHHhh--cCccEEE
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAM--ESFGTYVESMAGDASN--KKFLKTAL--RGVRSII 168 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~--~~~g~~vevV~GDl~D--~~sL~~AL--~GvDaVI 168 (198)
-.++++|||.|+ |-+|...+..+...|. +|.+..+++++.. ..++. ..++.-.-.| .+...+.. .|+|.||
T Consensus 25 ~~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa-~~~i~~~~~d~~~~~~~~~~~~~G~d~vi 102 (174)
T d1p0fa2 25 VTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGA-TECLNPKDYDKPIYEVICEKTNGGVDYAV 102 (174)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTC-SEEECGGGCSSCHHHHHHHHTTSCBSEEE
T ss_pred CCCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCC-cEEEcCCCchhHHHHHHHHhcCCCCcEEE
Confidence 356779999996 9999999999988886 6777778776643 22342 2233222222 22233333 5899999
Q ss_pred Ec--ChhHHHHHHHh--CCCCeEEEEc
Q 029118 169 CP--SEGFISNAGSL--KGVQHVILLS 191 (198)
Q Consensus 169 h~--a~G~lldAA~~--~GVkRiV~vS 191 (198)
-+ ...++.+++.. .+-.++|++.
T Consensus 103 d~~g~~~~~~~~~~~~~~~~G~~v~vG 129 (174)
T d1p0fa2 103 ECAGRIETMMNALQSTYCGSGVTVVLG 129 (174)
T ss_dssp ECSCCHHHHHHHHHTBCTTTCEEEECC
T ss_pred EcCCCchHHHHHHHHHHHhcCceEEEE
Confidence 87 23334444432 2334666654
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=95.25 E-value=0.012 Score=44.06 Aligned_cols=25 Identities=24% Similarity=0.170 Sum_probs=21.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKR 123 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G 123 (198)
.++|.|+||+|++|++++-.|+..+
T Consensus 3 p~KV~IiGA~G~VG~~la~~l~~~~ 27 (154)
T d5mdha1 3 PIRVLVTGAAGQIAYSLLYSIGNGS 27 (154)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTT
T ss_pred ceEEEEECCCCHHHHHHHHHHHHHH
Confidence 3589999999999999999887543
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=95.20 E-value=0.028 Score=42.44 Aligned_cols=67 Identities=10% Similarity=0.123 Sum_probs=45.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCC-CcEEEEEeCCccccc----------ccCCceEEEEccCCCHHHHHHhhcCcc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAME----------SFGTYVESMAGDASNKKFLKTALRGVR 165 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G-~~VralvR~~~~a~~----------~~g~~vevV~GDl~D~~sL~~AL~GvD 165 (198)
+|+.+|.|.|| |.+|++++..|..++ .++..+.++++.+.. ..+....+...+ + .++++++|
T Consensus 1 ap~~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~----~~~~~~ad 73 (150)
T d1t2da1 1 APKAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--T----YDDLAGAD 73 (150)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--C----GGGGTTCS
T ss_pred CCCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--c----ccccCCCc
Confidence 46789999996 999999998777666 367777777755321 112233343322 1 35789999
Q ss_pred EEEEc
Q 029118 166 SIICP 170 (198)
Q Consensus 166 aVIh~ 170 (198)
.||.+
T Consensus 74 vvvit 78 (150)
T d1t2da1 74 VVIVT 78 (150)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 99987
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=95.10 E-value=0.04 Score=41.07 Aligned_cols=85 Identities=14% Similarity=0.190 Sum_probs=56.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCC--cEEEEEeCCccccc----------ccCCceEEEE-ccCCCHHHHHHhhcCccE
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAME----------SFGTYVESMA-GDASNKKFLKTALRGVRS 166 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~--~VralvR~~~~a~~----------~~g~~vevV~-GDl~D~~sL~~AL~GvDa 166 (198)
|+|.|.|| |++|.+++-.|..++. ++..+.++++.+.. .++....+.. .| .++++++|.
T Consensus 1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d-------~~~~~~adi 72 (142)
T d1ojua1 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-------YSLLKGSEI 72 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-------GGGGTTCSE
T ss_pred CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCC-------HHHhccccE
Confidence 68999997 9999999998888773 68888877655321 1222233333 23 247999999
Q ss_pred EEEcC-----hh---------H------HHHHHHhCCCCeEEEEcc
Q 029118 167 IICPS-----EG---------F------ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 167 VIh~a-----~G---------~------lldAA~~~GVkRiV~vSS 192 (198)
||.++ .| + +.+..++.+.+-++.+-|
T Consensus 73 Vvitag~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~p~aivivvt 118 (142)
T d1ojua1 73 IVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT 118 (142)
T ss_dssp EEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred EEEeccccCCCCCchHHHHHHhhHHHHHHHHHHHhhCCCcEEEEec
Confidence 99872 11 1 455566677777766654
|
| >d1euca1 c.2.1.8 (A:1-130) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=95.07 E-value=0.084 Score=39.69 Aligned_cols=85 Identities=13% Similarity=0.121 Sum_probs=58.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhc--CccEEEEc-----
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICP----- 170 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~--GvDaVIh~----- 170 (198)
...+|+|-|=||..|+.-++++++.|-+|.+-|.+.+.-....+ +-++ | ++++|.+ |+|+=+..
T Consensus 14 k~TrVivQGiTG~~G~~ht~~m~~YGT~iVaGVtPgKgG~~~~g--iPVf--~-----tV~eA~~~~~~daSvIfVPp~~ 84 (130)
T d1euca1 14 KNTKVICQGFTGKQGTFHSQQALEYGTNLVGGTTPGKGGKTHLG--LPVF--N-----TVKEAKEQTGATASVIYVPPPF 84 (130)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEETT--EEEE--S-----SHHHHHHHHCCCEEEECCCHHH
T ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEeeccCCCCccccC--ccch--h-----hHHHHHHhcCCcEEEEecCHHH
Confidence 35689999999999999999999999999999965544332222 3222 2 4555553 67665443
Q ss_pred ChhHHHHHHHhCCCCeEEEEcc
Q 029118 171 SEGFISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 171 a~G~lldAA~~~GVkRiV~vSS 192 (198)
+...++||+ ++|++-+|.++-
T Consensus 85 a~dAi~EAi-~agI~liV~ITE 105 (130)
T d1euca1 85 AAAAINEAI-DAEVPLVVCITE 105 (130)
T ss_dssp HHHHHHHHH-HTTCSEEEECCC
T ss_pred HHHHHHHHH-hCCCCEEEEecC
Confidence 233466664 479999888763
|
| >d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Diaminopimelic acid dehydrogenase (DAPDH) species: Corynebacterium glutamicum [TaxId: 1718]
Probab=95.03 E-value=0.021 Score=43.01 Aligned_cols=32 Identities=9% Similarity=0.130 Sum_probs=25.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHC-CCcEEEEEe
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVK 131 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~-G~~VralvR 131 (198)
+.+|.|.| +|++|+.+++.|.+. +.++.+++.
T Consensus 3 kirvgiiG-~G~ig~~~~~~l~~~~~~elvav~~ 35 (170)
T d1f06a1 3 NIRVAIVG-YGNLGRSVEKLIAKQPDMDLVGIFS 35 (170)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHTTCSSEEEEEEEE
T ss_pred cceEEEEC-ChHHHHHHHHHHHhCCCcEEEEEEe
Confidence 34789998 599999999988764 677777764
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=94.97 E-value=0.004 Score=48.43 Aligned_cols=70 Identities=10% Similarity=-0.020 Sum_probs=46.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEE-------------EccCCCHHHHHHhhcCccE
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESM-------------AGDASNKKFLKTALRGVRS 166 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV-------------~GDl~D~~sL~~AL~GvDa 166 (198)
|+|.|. |.|++|..++..|.++||+|.++..|++...........+. .+.+.-...+.++++.+|.
T Consensus 1 MkI~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln~g~~p~~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~d~ 79 (202)
T d1mv8a2 1 MRISIF-GLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDV 79 (202)
T ss_dssp CEEEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSE
T ss_pred CEEEEE-CCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhcccCCcccchhhhhhhhhhhcccccccCCCHHHHHhhCCE
Confidence 578888 68999999999999999999999877654332211000000 0001111245778899999
Q ss_pred EEEc
Q 029118 167 IICP 170 (198)
Q Consensus 167 VIh~ 170 (198)
+|.+
T Consensus 80 i~i~ 83 (202)
T d1mv8a2 80 SFIC 83 (202)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 9987
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=94.96 E-value=0.028 Score=42.74 Aligned_cols=67 Identities=16% Similarity=0.212 Sum_probs=46.7
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc---cCC--ceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGT--YVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~---~g~--~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
..++++|+|.|| |..++.++..|...+.+|.++.|+.+++... +.. .+..+.-|- ..+..+|.||++
T Consensus 15 ~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~-------~~~~~~diiIN~ 86 (171)
T d1p77a1 15 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDS-------IPLQTYDLVINA 86 (171)
T ss_dssp CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG-------CCCSCCSEEEEC
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhcc-------ccccccceeeec
Confidence 456778999987 6679999999999889999999998765422 221 234444332 135678888876
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=94.70 E-value=0.0086 Score=46.95 Aligned_cols=70 Identities=17% Similarity=0.186 Sum_probs=56.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc---cccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~---~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
.+.-+|+|.|| |-.|.+-++.+..-|.+|+++.++++... ..++..++.. ..+++.+.++++.+|.||.+
T Consensus 30 v~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~~---~~~~~~l~~~~~~aDivI~a 102 (168)
T d1pjca1 30 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELL---YSNSAEIETAVAEADLLIGA 102 (168)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEE---ECCHHHHHHHHHTCSEEEEC
T ss_pred CCCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcccceee---hhhhhhHHHhhccCcEEEEe
Confidence 34568999985 99999999999999999999998876543 2334445554 56788999999999999987
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=94.59 E-value=0.028 Score=43.53 Aligned_cols=70 Identities=11% Similarity=0.048 Sum_probs=45.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcccc--cccCCceEEEEccCCCH---HHHHHhh--cCccEEE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAM--ESFGTYVESMAGDASNK---KFLKTAL--RGVRSII 168 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~--~~~g~~vevV~GDl~D~---~sL~~AL--~GvDaVI 168 (198)
.++++|||.|| |-+|...+..+...|. +|.+..+++++.. ..++ .+.+. |..+. +.+.+.. .|+|.+|
T Consensus 24 ~~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~G--a~~~~-~~~~~~~~~~i~~~t~g~g~D~vi 99 (195)
T d1kola2 24 GPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQG--FEIAD-LSLDTPLHEQIAALLGEPEVDCAV 99 (195)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTT--CEEEE-TTSSSCHHHHHHHHHSSSCEEEEE
T ss_pred CCCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhhcc--ccEEE-eCCCcCHHHHHHHHhCCCCcEEEE
Confidence 46779999986 9999888887777787 5667777665543 2334 44433 33332 2333333 3789999
Q ss_pred Ec
Q 029118 169 CP 170 (198)
Q Consensus 169 h~ 170 (198)
.+
T Consensus 100 d~ 101 (195)
T d1kola2 100 DA 101 (195)
T ss_dssp EC
T ss_pred EC
Confidence 76
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=94.56 E-value=0.0043 Score=48.42 Aligned_cols=70 Identities=14% Similarity=0.125 Sum_probs=47.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccc--------cCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--------FGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~--------~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+++|.|.| +|.-|..++..|...||+|+...|+++..... +-+++++ .-++.=...+.+|++++|.||.+
T Consensus 7 m~KI~ViG-aG~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l-~~~i~~t~~l~~a~~~ad~iiia 84 (189)
T d1n1ea2 7 LNKAVVFG-SGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQL-ASNITFTSDVEKAYNGAEIILFV 84 (189)
T ss_dssp EEEEEEEC-CSHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBC-CTTEEEESCHHHHHTTCSCEEEC
T ss_pred eceEEEEC-CCHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhccccccccccccc-ccccccchhhhhccCCCCEEEEc
Confidence 45699998 48899999999999999999999987543211 0111211 01111123578899999999987
|
| >d1oi7a1 c.2.1.8 (A:1-121) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain species: Thermus thermophilus [TaxId: 274]
Probab=94.46 E-value=0.18 Score=37.38 Aligned_cols=84 Identities=25% Similarity=0.298 Sum_probs=57.0
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhh--cCccEEEEc-----C
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL--RGVRSIICP-----S 171 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL--~GvDaVIh~-----a 171 (198)
..+|+|-|=||..|+.-+++.++.|-+|.+-|.+.+.-....+ +-++ | ++++|+ .++|+=+.. +
T Consensus 7 ~trVivQGiTG~~G~~ht~~m~~yGT~iVaGVtPgkgG~~~~g--iPVf--~-----tV~eAv~~~~~d~SvIfVPp~~a 77 (121)
T d1oi7a1 7 ETRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPGKGGMEVLG--VPVY--D-----TVKEAVAHHEVDASIIFVPAPAA 77 (121)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEETT--EEEE--S-----SHHHHHHHSCCSEEEECCCHHHH
T ss_pred CCcEEEEcCCCcHHHHHHHHHHHhCCceEeeeecCCCCcEEEC--CchH--h-----hHHHHHHhcCCeEEEEeeCHHHH
Confidence 4589999999999999999999999999999965443322222 3322 2 444444 367655443 2
Q ss_pred hhHHHHHHHhCCCCeEEEEcc
Q 029118 172 EGFISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 172 ~G~lldAA~~~GVkRiV~vSS 192 (198)
...++||. ++|++-+|.++-
T Consensus 78 ~dAi~EAi-~agI~liv~ITE 97 (121)
T d1oi7a1 78 ADAALEAA-HAGIPLIVLITE 97 (121)
T ss_dssp HHHHHHHH-HTTCSEEEECCS
T ss_pred HHHHHHHH-hCCCcEEEEecC
Confidence 33366654 679999888764
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=94.45 E-value=0.032 Score=41.59 Aligned_cols=73 Identities=16% Similarity=0.126 Sum_probs=47.1
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcccc--cccCCceEEEEccCCCHHHHHHhh--cCccEEEEcC
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAM--ESFGTYVESMAGDASNKKFLKTAL--RGVRSIICPS 171 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~--~~~g~~vevV~GDl~D~~sL~~AL--~GvDaVIh~a 171 (198)
.++++|||.|+ |.+|...+..+...|. .|.+..+++++.. ..++ ..+++..+-.+.+.+.+.. +|+|.||.+.
T Consensus 31 ~~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~g-a~~~i~~~~~~~~~~~~~~~~~g~d~vid~~ 108 (172)
T d1h2ba2 31 YPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLG-ADHVVDARRDPVKQVMELTRGRGVNVAMDFV 108 (172)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTT-CSEEEETTSCHHHHHHHHTTTCCEEEEEESS
T ss_pred CCCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcc-cceeecCcccHHHHHHHhhCCCCceEEEEec
Confidence 45678999986 9999998888877775 5566666665432 2233 2355544433344445444 4689999883
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.94 E-value=0.021 Score=44.28 Aligned_cols=35 Identities=11% Similarity=0.080 Sum_probs=32.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~ 135 (198)
++|.|.|| |.+|+.++..++.+||+|++..++++.
T Consensus 5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~ 39 (192)
T d1f0ya2 5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDI 39 (192)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHH
Confidence 57999999 999999999999999999999998753
|
| >d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Virulence factor MviM species: Escherichia coli [TaxId: 562]
Probab=93.73 E-value=0.064 Score=39.53 Aligned_cols=64 Identities=9% Similarity=0.020 Sum_probs=37.8
Q ss_pred CCeEEEEcCCChHHHH-HHHHHHH-CCCcEEEEE-eCCcccccccC-CceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 99 RDAVLVTDGDSDIGQM-VILSLIV-KRTRIKALV-KDKRNAMESFG-TYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~-Vvr~Ll~-~G~~Vralv-R~~~~a~~~~g-~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+.+|.|.| +|.+|+. .++.|.. .+.++.+++ ++++++..... .++.+ .++. .+.++.+|+|+.+
T Consensus 1 Kiri~iIG-~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~----~~~~---~~l~~~~D~V~I~ 68 (164)
T d1tlta1 1 KLRIGVVG-LGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPY----ADSL---SSLAASCDAVFVH 68 (164)
T ss_dssp CEEEEEEC-CSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCB----CSSH---HHHHTTCSEEEEC
T ss_pred CCEEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhcccccc----cccc---hhhhhhccccccc
Confidence 35799999 5999975 4555544 367888776 55555432211 01221 2333 4445789999876
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=93.65 E-value=0.031 Score=42.47 Aligned_cols=38 Identities=13% Similarity=0.210 Sum_probs=31.5
Q ss_pred CCCeEEE-EcCCChHHHHHHHHHHHCCCcEEEEEeCCcc
Q 029118 98 ARDAVLV-TDGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (198)
Q Consensus 98 ~~~~ILV-TGATGfIG~~Vvr~Ll~~G~~VralvR~~~~ 135 (198)
++.+++| +||+|-+|...+..+...|.+|.+.+|+++.
T Consensus 28 ~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~ 66 (189)
T d1gu7a2 28 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPN 66 (189)
T ss_dssp TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTT
T ss_pred CCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccc
Confidence 3445555 7999999999998888899999999988754
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=93.63 E-value=0.054 Score=40.37 Aligned_cols=35 Identities=26% Similarity=0.282 Sum_probs=31.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCC
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 133 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~ 133 (198)
.+++|+|.|| |..|-..+..|.++|++|.++.|+.
T Consensus 5 ~~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~ 39 (268)
T d1c0pa1 5 SQKRVVVLGS-GVIGLSSALILARKGYSVHILARDL 39 (268)
T ss_dssp CSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 4568999985 9999999999999999999999864
|
| >d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Myxococcus xanthus [TaxId: 34]
Probab=93.62 E-value=0.036 Score=41.05 Aligned_cols=34 Identities=26% Similarity=0.163 Sum_probs=30.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~ 134 (198)
|+|+|.|| |..|-..+.+|.++|++|.++-+++.
T Consensus 1 m~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~~ 34 (347)
T d2ivda1 1 MNVAVVGG-GISGLAVAHHLRSRGTDAVLLESSAR 34 (347)
T ss_dssp CCEEEECC-BHHHHHHHHHHHTTTCCEEEECSSSS
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 57999998 99999999999999999999987653
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=93.60 E-value=0.034 Score=45.87 Aligned_cols=35 Identities=11% Similarity=0.107 Sum_probs=30.3
Q ss_pred CCeEEEEc--CCChHHHHHHHHHHHCCCcEEEEEeCC
Q 029118 99 RDAVLVTD--GDSDIGQMVILSLIVKRTRIKALVKDK 133 (198)
Q Consensus 99 ~~~ILVTG--ATGfIG~~Vvr~Ll~~G~~VralvR~~ 133 (198)
.+..|||| ++.-||+.++++|.++|.+|.+..|+.
T Consensus 2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~ 38 (329)
T d1uh5a_ 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPP 38 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGG
T ss_pred CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCch
Confidence 57899999 556899999999999999999887654
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=93.46 E-value=0.022 Score=43.81 Aligned_cols=36 Identities=14% Similarity=0.021 Sum_probs=32.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~ 135 (198)
-++|.|.|| |.+|+.++..++.+|++|+++.++++.
T Consensus 4 I~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~ 39 (186)
T d1wdka3 4 VKQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHG 39 (186)
T ss_dssp CSSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHH
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHH
Confidence 357999999 999999999999999999999998754
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=93.44 E-value=0.13 Score=38.38 Aligned_cols=71 Identities=10% Similarity=0.120 Sum_probs=45.3
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEE-EeCCcccc--cccCCceEEEEccCCCHHHHHH--hh--cCccEEE
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAM--ESFGTYVESMAGDASNKKFLKT--AL--RGVRSII 168 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~Vral-vR~~~~a~--~~~g~~vevV~GDl~D~~sL~~--AL--~GvDaVI 168 (198)
-.++++|||.|+ |-+|...+..+...|.++..+ .+++++.. +.++. .+++ |..+.+..++ .+ .|+|.||
T Consensus 26 ~~~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga-~~~i--~~~~~~~~~~i~~~t~gg~D~vi 101 (174)
T d1f8fa2 26 VTPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGA-THVI--NSKTQDPVAAIKEITDGGVNFAL 101 (174)
T ss_dssp CCTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTC-SEEE--ETTTSCHHHHHHHHTTSCEEEEE
T ss_pred CCCCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCC-eEEE--eCCCcCHHHHHHHHcCCCCcEEE
Confidence 346779999998 999999998888888876655 44554432 23442 3444 3344333332 22 3689999
Q ss_pred Ec
Q 029118 169 CP 170 (198)
Q Consensus 169 h~ 170 (198)
-+
T Consensus 102 d~ 103 (174)
T d1f8fa2 102 ES 103 (174)
T ss_dssp EC
T ss_pred Ec
Confidence 77
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.41 E-value=0.048 Score=42.22 Aligned_cols=65 Identities=17% Similarity=0.075 Sum_probs=50.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
..+++++|.| .|.||+-+++.|...|.+|.+...+|.++.+..-.+.++. .+++++.-+|.||.+
T Consensus 22 l~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~~dG~~v~--------~~~~a~~~adivvta 86 (163)
T d1li4a1 22 IAGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPINALQAAMEGYEVT--------TMDEACQEGNIFVTT 86 (163)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC--------CHHHHTTTCSEEEEC
T ss_pred ecCCEEEEec-cccccHHHHHHHHhCCCeeEeeecccchhHHhhcCceEee--------ehhhhhhhccEEEec
Confidence 4577888876 8999999999999999999999988866544433334443 467888889988876
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=93.33 E-value=0.098 Score=40.25 Aligned_cols=60 Identities=20% Similarity=0.252 Sum_probs=45.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
..+++|.|.| .|.||+.+++.|..-|.+|.+..|.+...... -..++++.++.+|.|+++
T Consensus 40 l~gk~vgIiG-~G~IG~~va~~l~~~g~~v~~~d~~~~~~~~~-------------~~~~l~ell~~sDiv~~~ 99 (181)
T d1qp8a1 40 IQGEKVAVLG-LGEIGTRVGKILAALGAQVRGFSRTPKEGPWR-------------FTNSLEEALREARAAVCA 99 (181)
T ss_dssp CTTCEEEEES-CSTHHHHHHHHHHHTTCEEEEECSSCCCSSSC-------------CBSCSHHHHTTCSEEEEC
T ss_pred ccCceEEEec-cccccccceeeeecccccccccccccccccee-------------eeechhhhhhccchhhcc
Confidence 4568899998 57799999999999999999998766432110 112578899999999864
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=93.09 E-value=0.047 Score=40.01 Aligned_cols=36 Identities=14% Similarity=0.346 Sum_probs=32.2
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeC
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD 132 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~ 132 (198)
+..++++||.|| |.+|..-++.|++.|.+|+++...
T Consensus 10 ~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~ 45 (150)
T d1kyqa1 10 QLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD 45 (150)
T ss_dssp CCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred eeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence 466889999999 999999999999999999999643
|
| >d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Alpha-glucosidase AglA species: Thermotoga maritima [TaxId: 2336]
Probab=93.03 E-value=0.099 Score=39.74 Aligned_cols=67 Identities=9% Similarity=0.027 Sum_probs=44.3
Q ss_pred CCCeEEEEcCCChHHHH--HHHHHHHC----CCcEEEEEeCCcccc----------cccCCceEEEEccCCCHHHHHHhh
Q 029118 98 ARDAVLVTDGDSDIGQM--VILSLIVK----RTRIKALVKDKRNAM----------ESFGTYVESMAGDASNKKFLKTAL 161 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~--Vvr~Ll~~----G~~VralvR~~~~a~----------~~~g~~vevV~GDl~D~~sL~~AL 161 (198)
|.++|.|.|| |.+|.. ++..|+.. +.++..+.++++++. ..++...++...+ ..++|+
T Consensus 1 p~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~t-----d~~eaL 74 (171)
T d1obba1 1 PSVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTM-----NLDDVI 74 (171)
T ss_dssp CCCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEES-----CHHHHH
T ss_pred CCcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEeC-----Chhhcc
Confidence 5789999997 877754 33334432 468999998876542 1133344444333 467899
Q ss_pred cCccEEEEc
Q 029118 162 RGVRSIICP 170 (198)
Q Consensus 162 ~GvDaVIh~ 170 (198)
+|+|.||+.
T Consensus 75 ~dad~Vv~~ 83 (171)
T d1obba1 75 IDADFVINT 83 (171)
T ss_dssp TTCSEEEEC
T ss_pred cCCCeEeee
Confidence 999999986
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=93.01 E-value=0.1 Score=37.26 Aligned_cols=36 Identities=11% Similarity=0.149 Sum_probs=31.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~ 135 (198)
.++++|.| .|++|-.++..|.++|.+|..+.|.+..
T Consensus 30 ~~~vvIIG-gG~iG~E~A~~l~~~g~~Vtli~~~~~~ 65 (121)
T d1d7ya2 30 QSRLLIVG-GGVIGLELAATARTAGVHVSLVETQPRL 65 (121)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CCeEEEEC-cchhHHHHHHHhhcccceEEEEeecccc
Confidence 46787776 5999999999999999999999987754
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=92.93 E-value=0.03 Score=41.93 Aligned_cols=37 Identities=16% Similarity=0.160 Sum_probs=31.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM 137 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~ 137 (198)
|+|-|. +.|.+|..+++.|+++||+|.+..|++++..
T Consensus 2 MkIGvI-GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~ 38 (178)
T d1pgja2 2 MDVGVV-GLGVMGANLALNIAEKGFKVAVFNRTYSKSE 38 (178)
T ss_dssp BSEEEE-CCSHHHHHHHHHHHHTTCCEEEECSSHHHHH
T ss_pred CEEEEE-eehHHHHHHHHHHHHCCCeEEEEECCHHHHH
Confidence 457777 4899999999999999999999999887653
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=92.92 E-value=0.03 Score=41.87 Aligned_cols=68 Identities=12% Similarity=0.109 Sum_probs=40.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC----c---EEEEEeCC--ccccc-------ccCCceEEEEccCCCHHHHHHhhc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRT----R---IKALVKDK--RNAME-------SFGTYVESMAGDASNKKFLKTALR 162 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~----~---VralvR~~--~~a~~-------~~g~~vevV~GDl~D~~sL~~AL~ 162 (198)
.++|.|+||+|++|++++-.|...+. + ...+.-+. ..... ........+...- ...++++
T Consensus 4 p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 79 (154)
T d1y7ta1 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATD----DPKVAFK 79 (154)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEES----CHHHHTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCC----chhhhcc
Confidence 34899999999999999988877653 1 12221111 11110 0112233333322 3367899
Q ss_pred CccEEEEc
Q 029118 163 GVRSIICP 170 (198)
Q Consensus 163 GvDaVIh~ 170 (198)
++|.||.+
T Consensus 80 ~advViit 87 (154)
T d1y7ta1 80 DADYALLV 87 (154)
T ss_dssp TCSEEEEC
T ss_pred cccEEEee
Confidence 99999987
|
| >d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=92.77 E-value=0.08 Score=40.96 Aligned_cols=90 Identities=11% Similarity=0.088 Sum_probs=51.1
Q ss_pred eEEEEcCCChHHHHHHHHHHHC-CCcEEEEEeC-Cccccc-c--cCCceE--------EEEccCCCHHHHHHhhcCccEE
Q 029118 101 AVLVTDGDSDIGQMVILSLIVK-RTRIKALVKD-KRNAME-S--FGTYVE--------SMAGDASNKKFLKTALRGVRSI 167 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~-G~~VralvR~-~~~a~~-~--~g~~ve--------vV~GDl~D~~sL~~AL~GvDaV 167 (198)
+|.|-| .|.||+.++|.|.++ +.+|.++... +..... . .+.... +-...+.-...+..++.++|.|
T Consensus 3 KVaING-fGRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~~~vDiV 81 (178)
T d1b7go1 3 NVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSDIV 81 (178)
T ss_dssp EEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCSEE
T ss_pred EEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhhhcCCEE
Confidence 688988 899999999999986 4678877532 221111 0 110000 0001111223456667899999
Q ss_pred EEcC-hhH---HHHHHHhCCCCeEEEEcc
Q 029118 168 ICPS-EGF---ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 168 Ih~a-~G~---lldAA~~~GVkRiV~vSS 192 (198)
|-|. ... -++...++| +++|+.++
T Consensus 82 iecTG~f~~~e~a~~hl~~G-~KvIi~~~ 109 (178)
T d1b7go1 82 VDTTPNGVGAQYKPIYLQLQ-RNAIFQGG 109 (178)
T ss_dssp EECCSTTHHHHHHHHHHHTT-CEEEECTT
T ss_pred EECCCCcCCHHHHHHHHHcC-CEEEEECC
Confidence 9773 221 344445678 57776544
|
| >d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Nicotinamide nucleotide transhydrogenase dI component species: Rhodospirillum rubrum [TaxId: 1085]
Probab=92.76 E-value=0.09 Score=41.39 Aligned_cols=72 Identities=13% Similarity=-0.062 Sum_probs=50.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEcc----------------------CCCHH
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGD----------------------ASNKK 155 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GD----------------------l~D~~ 155 (198)
+.-+|+|.|| |-.|.+-++-.+.-|..|++++.+++...+....+-.++.-+ ....+
T Consensus 28 ~pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~ 106 (183)
T d1l7da1 28 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE 106 (183)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred CCcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHHH
Confidence 3457999985 899999999999999999999988765433211112222111 12356
Q ss_pred HHHHhhcCccEEEEc
Q 029118 156 FLKTALRGVRSIICP 170 (198)
Q Consensus 156 sL~~AL~GvDaVIh~ 170 (198)
.+.+++..+|.||.+
T Consensus 107 ~l~~~l~~aDlVI~t 121 (183)
T d1l7da1 107 AVLKELVKTDIAITT 121 (183)
T ss_dssp HHHHHHTTCSEEEEC
T ss_pred HHHHHHHhhhhheee
Confidence 788889999999986
|
| >d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein TT1466 species: Thermus thermophilus [TaxId: 274]
Probab=92.59 E-value=0.068 Score=39.37 Aligned_cols=31 Identities=16% Similarity=0.100 Sum_probs=27.6
Q ss_pred CCeEEEEcCC---ChHHHHHHHHHHHCCCcEEEE
Q 029118 99 RDAVLVTDGD---SDIGQMVILSLIVKRTRIKAL 129 (198)
Q Consensus 99 ~~~ILVTGAT---GfIG~~Vvr~Ll~~G~~Vral 129 (198)
.++|.|.||| +..|..+++.|++.|+++..+
T Consensus 13 pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v 46 (136)
T d1iuka_ 13 AKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPV 46 (136)
T ss_dssp CCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEE
T ss_pred CCeEEEEeecCCCCCchHHHHHHHhcCCCCceEE
Confidence 4589999999 679999999999999998776
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=92.29 E-value=0.17 Score=34.97 Aligned_cols=80 Identities=5% Similarity=-0.128 Sum_probs=54.4
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc-cccCCceEEEEccCCCHHHHHHhhcCccEEEEc-C--hh-H
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-ESFGTYVESMAGDASNKKFLKTALRGVRSIICP-S--EG-F 174 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~-~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~-a--~G-~ 174 (198)
++|.+.|-.|-==+.|++.|.++|+.|.+-++.+.+.. .+...++++..+. +++ -++++|.||.. + .. .
T Consensus 2 ~~ihfiGIgG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~~~Gi~i~~gh--~~~----~i~~~d~vV~SsAI~~~np 75 (89)
T d1j6ua1 2 MKIHFVGIGGIGMSAVALHEFSNGNDVYGSNIEETERTAYLRKLGIPIFVPH--SAD----NWYDPDLVIKTPAVRDDNP 75 (89)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCCEESSC--CTT----SCCCCSEEEECTTCCTTCH
T ss_pred cEEEEEeECHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHHHCCCeEEeee--ccc----ccCCCCEEEEecCcCCCCH
Confidence 56777776654445689999999999999998765432 2223457776552 222 25789999876 2 33 3
Q ss_pred HHHHHHhCCCC
Q 029118 175 ISNAGSLKGVQ 185 (198)
Q Consensus 175 lldAA~~~GVk 185 (198)
-+.+|++.|++
T Consensus 76 el~~A~~~gIp 86 (89)
T d1j6ua1 76 EIVRARMERVP 86 (89)
T ss_dssp HHHHHHHTTCC
T ss_pred HHHHHHHcCCC
Confidence 78899999985
|
| >d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Transcriptional repressor Rex, C-terminal domain domain: Transcriptional repressor Rex, C-terminal domain species: Thermus aquaticus [TaxId: 271]
Probab=92.18 E-value=0.2 Score=36.08 Aligned_cols=88 Identities=5% Similarity=-0.017 Sum_probs=54.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHH-CCCcEEEEEeC-CcccccccCCceEEEEccCCCHHHHHHhhc-CccEEEEc-C-h-
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIV-KRTRIKALVKD-KRNAMESFGTYVESMAGDASNKKFLKTALR-GVRSIICP-S-E- 172 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~-~G~~VralvR~-~~~a~~~~g~~vevV~GDl~D~~sL~~AL~-GvDaVIh~-a-~- 172 (198)
+.+++|.|| |.+|+.+++.+.. .++++.+++-+ +++..... .++.+... +.+.+..+ .++.++.+ . .
T Consensus 3 ~~~v~I~Ga-G~~G~~l~~~l~~~~~~~iv~fiDdd~~k~G~~I-~Gi~V~~~-----~~l~~~~~~~i~iai~~i~~~~ 75 (126)
T d2dt5a2 3 KWGLCIVGM-GRLGSALADYPGFGESFELRGFFDVDPEKVGRPV-RGGVIEHV-----DLLPQRVPGRIEIALLTVPREA 75 (126)
T ss_dssp CEEEEEECC-SHHHHHHHHCSCCCSSEEEEEEEESCTTTTTCEE-TTEEEEEG-----GGHHHHSTTTCCEEEECSCHHH
T ss_pred CceEEEEcC-CHHHHHHHHhHhhcCCcEEEEEEeCchHhcCCEE-CCEEEecH-----HHHHHHHhhcccEEEEeCCHHH
Confidence 347888875 8999999987743 57899999864 33322222 23555432 34555443 34444444 2 1
Q ss_pred -hHHHHHHHhCCCCeEEEEccc
Q 029118 173 -GFISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 173 -G~lldAA~~~GVkRiV~vSS~ 193 (198)
--+++.+.+.||+.|.-++..
T Consensus 76 ~~~I~d~l~~~gIk~I~~f~~~ 97 (126)
T d2dt5a2 76 AQKAADLLVAAGIKGILNFAPV 97 (126)
T ss_dssp HHHHHHHHHHHTCCEEEECSSS
T ss_pred HHHHHHHHHHcCCCEEeecCce
Confidence 128888899999988876553
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=92.13 E-value=0.093 Score=38.30 Aligned_cols=36 Identities=8% Similarity=-0.062 Sum_probs=31.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR 134 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~ 134 (198)
.+++|+|.|| |..|-..+..|.++|+ +|+++.|.+.
T Consensus 3 ~~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~ 39 (196)
T d1gtea4 3 YSAKIALLGA-GPASISCASFLARLGYSDITIFEKQEY 39 (196)
T ss_dssp GGCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred CCCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence 4578999985 9999999999999998 5999988664
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=92.01 E-value=0.056 Score=41.61 Aligned_cols=64 Identities=19% Similarity=0.007 Sum_probs=45.0
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
..++++.|.| .|.||+.+++.|..-|.+|.+..|...+.... ...+++ .++++.++.+|.|+.+
T Consensus 42 l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~-~~~~~~--------~~l~ell~~sDiv~~~ 105 (184)
T d1ygya1 42 IFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSPARAA-QLGIEL--------LSLDDLLARADFISVH 105 (184)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCHHHHH-HHTCEE--------CCHHHHHHHCSEEEEC
T ss_pred ccceeeeecc-ccchhHHHHHHhhhccceEEeecCCCChhHHh-hcCcee--------ccHHHHHhhCCEEEEc
Confidence 4566777777 79999999999988899998887655443211 111222 2567889999999754
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=91.90 E-value=0.047 Score=41.09 Aligned_cols=39 Identities=10% Similarity=0.243 Sum_probs=33.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcccc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAM 137 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~ 137 (198)
..++|||.|| |..++.++..|...|. +|.++.|+++++.
T Consensus 16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~ 55 (167)
T d1npya1 16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQ 55 (167)
T ss_dssp TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHH
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHH
Confidence 4567999988 8899999999999996 7999999987653
|
| >d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tubulin nucleotide-binding domain-like superfamily: Tubulin nucleotide-binding domain-like family: Tubulin, GTPase domain domain: Cell-division protein FtsZ species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=91.90 E-value=0.15 Score=40.58 Aligned_cols=99 Identities=12% Similarity=0.202 Sum_probs=63.1
Q ss_pred ccccCCCCeEEEEcCCChHHHHHHHHHHHCCCc-EEEEEeCCccc-ccccCCceEEEEccC-------------------
Q 029118 93 EFPEEARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNA-MESFGTYVESMAGDA------------------- 151 (198)
Q Consensus 93 ~~~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~-VralvR~~~~a-~~~~g~~vevV~GDl------------------- 151 (198)
+.....+.+|.|.|- |.-|.+++.+|.+.+.+ |..++-|.+.. .........+..|.-
T Consensus 9 ~~~~~~~~ki~ViGv-GGaG~n~v~~l~~~~~~~v~~iainTD~~~L~~~~~~~ki~ig~~~t~g~Gag~~p~~g~~aa~ 87 (209)
T d2vapa1 9 EYLQQTKAKITVVGC-GGAGNNTITRLKMEGIEGAKTVAINTDAQQLIRTKADKKILIGKKLTRGLGAGGNPKIGEEAAK 87 (209)
T ss_dssp HHHHTTCCCEEEEEE-HHHHHHHHHHHHHHTCTTEEEEEEESBHHHHHTSCCSEEEECCTTTTTTBCCTTCHHHHHHHHH
T ss_pred HHHhccCCcEEEEEe-CChHHHHHHHHHHcCCCceEEEEEeCCHHHHhcCCcchhcccccccccccccccchHHHHHHHH
Confidence 444566678999885 55788999999998854 77666554321 111111223333322
Q ss_pred CCHHHHHHhhcCccEEEEcC-----hhH-----HHHHHHhCCCCeEEEEcc
Q 029118 152 SNKKFLKTALRGVRSIICPS-----EGF-----ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 152 ~D~~sL~~AL~GvDaVIh~a-----~G~-----lldAA~~~GVkRiV~vSS 192 (198)
.+.+.+.++++|+|.||.++ .|+ +.+.|++.|+--+-+++-
T Consensus 88 e~~~~I~~~l~~~d~vfi~AGlGGGTGsgaapvia~~ake~g~lvv~ivtl 138 (209)
T d2vapa1 88 ESAEEIKAAIQDSDMVFITCGLGGGTGTGSAPVVAEISKKIGALTVAVVTL 138 (209)
T ss_dssp HTHHHHHHHHTTCSEEEEEEETTSSHHHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHhccCCCEEEEEEeCCCCccccHHHHHHHHHHHcCCcEEEEEec
Confidence 23558889999999999772 222 789999999866655543
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=91.69 E-value=0.089 Score=40.96 Aligned_cols=62 Identities=15% Similarity=0.024 Sum_probs=44.6
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
..+++|.|.| .|.||+.+++.|..-|.+|.+..+.+..... ..+++ .++.+.++.+|.|+.+
T Consensus 43 l~~ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~---~~~~~--------~~l~~l~~~~D~v~~~ 104 (199)
T d1dxya1 43 LGQQTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYPMKGDH---PDFDY--------VSLEDLFKQSDVIDLH 104 (199)
T ss_dssp GGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCSSCC---TTCEE--------CCHHHHHHHCSEEEEC
T ss_pred ccceeeeeee-cccccccccccccccceeeeccCCccchhhh---cchhH--------HHHHHHHHhcccceee
Confidence 4467888876 7999999999999999999998775543211 11222 2467778889988754
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=91.69 E-value=0.13 Score=38.97 Aligned_cols=37 Identities=19% Similarity=0.195 Sum_probs=32.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~ 135 (198)
..++|+|.|| |..|..++..|.++|++|+++-|+++.
T Consensus 3 ~~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~~~ 39 (265)
T d2voua1 3 TTDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSPQP 39 (265)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 4568999985 999999999999999999999886653
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=91.57 E-value=0.088 Score=41.17 Aligned_cols=63 Identities=13% Similarity=0.031 Sum_probs=45.6
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
..+++|.|.| .|.||+.+++.|..-|.+|.+..+...+..... .....++.+.++.+|.|+.+
T Consensus 41 l~gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~~~~~~~----------~~~~~~l~~~l~~sDii~~~ 103 (197)
T d1j4aa1 41 VRDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRNPELEKK----------GYYVDSLDDLYKQADVISLH 103 (197)
T ss_dssp GGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHT----------TCBCSCHHHHHHHCSEEEEC
T ss_pred ccCCeEEEec-ccccchhHHHhHhhhcccccccCcccccccccc----------eeeecccccccccccccccc
Confidence 4567899887 799999999999999999998876544322111 11234578888889988754
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=91.33 E-value=0.2 Score=34.85 Aligned_cols=35 Identities=14% Similarity=0.070 Sum_probs=30.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~ 135 (198)
++++|.| .|++|-.++..|.+.|.+|+++.|.+.-
T Consensus 23 ~~v~IiG-gG~ig~E~A~~l~~~G~~Vtlve~~~~i 57 (117)
T d1ebda2 23 KSLVVIG-GGYIGIELGTAYANFGTKVTILEGAGEI 57 (117)
T ss_dssp SEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CeEEEEC-CCccceeeeeeecccccEEEEEEeccee
Confidence 5788887 5999999999999999999999987653
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Probab=91.08 E-value=0.13 Score=40.34 Aligned_cols=40 Identities=13% Similarity=0.028 Sum_probs=34.3
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA 136 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a 136 (198)
+..+++|+|-| -|.+|+++++.|.+.|.+|.+...++...
T Consensus 24 ~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~ 63 (201)
T d1c1da1 24 SLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERV 63 (201)
T ss_dssp CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHH
Confidence 56788999997 89999999999999999999887665543
|
| >d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM1727 species: Thermotoga maritima [TaxId: 2336]
Probab=90.97 E-value=0.0067 Score=44.38 Aligned_cols=79 Identities=13% Similarity=0.066 Sum_probs=40.4
Q ss_pred CCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc-ChhHHHHHHHhC--C
Q 029118 107 GDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-SEGFISNAGSLK--G 183 (198)
Q Consensus 107 ATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~-a~G~lldAA~~~--G 183 (198)
|+|.+|+++++.|.+.++.+.+..|+++++......+.. . .. +..++++.+|.||.+ ....+.+.+.+- .
T Consensus 6 G~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~~-~---~~---~~~~~~~~~DiVil~v~d~~i~~v~~~l~~~ 78 (153)
T d2i76a2 6 GTGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYGG-K---AA---TLEKHPELNGVVFVIVPDRYIKTVANHLNLG 78 (153)
T ss_dssp SCCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTCC-C---CC---SSCCCCC---CEEECSCTTTHHHHHTTTCCS
T ss_pred eCcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhcccc-c---cc---chhhhhccCcEEEEeccchhhhHHHhhhccc
Confidence 589999999988765444446778888765433211111 1 11 234578889999987 333333333322 2
Q ss_pred CCeEEEEcc
Q 029118 184 VQHVILLSQ 192 (198)
Q Consensus 184 VkRiV~vSS 192 (198)
-+-+|.+|+
T Consensus 79 ~~ivi~~s~ 87 (153)
T d2i76a2 79 DAVLVHCSG 87 (153)
T ss_dssp SCCEEECCS
T ss_pred ceeeeeccc
Confidence 234555554
|
| >d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Acetaldehyde dehydrogenase (acylating) species: Pseudomonas sp. [TaxId: 306]
Probab=90.97 E-value=0.64 Score=34.71 Aligned_cols=89 Identities=17% Similarity=0.075 Sum_probs=49.4
Q ss_pred CCeEEEEcCCChHHHHH-HHHHHH-CCCcEEEEE-eCCccccc--ccCCceEEEEccCCCHHHHHHh--hcCccEEEEc-
Q 029118 99 RDAVLVTDGDSDIGQMV-ILSLIV-KRTRIKALV-KDKRNAME--SFGTYVESMAGDASNKKFLKTA--LRGVRSIICP- 170 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~V-vr~Ll~-~G~~Vralv-R~~~~a~~--~~g~~vevV~GDl~D~~sL~~A--L~GvDaVIh~- 170 (198)
+.+|.|.| +|.+|+.+ ++.|.. ...++.+++ |+++.... ....++.+... ..+.+.+. +.++|.||.+
T Consensus 4 kirvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~~~---~~d~l~~~~~~~~iDiVf~AT 79 (157)
T d1nvmb1 4 KLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYA---GVEGLIKLPEFADIDFVFDAT 79 (157)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEESS---HHHHHHHSGGGGGEEEEEECS
T ss_pred CcEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCccccc---ceeeeeecccccccCEEEEcC
Confidence 46899999 99999864 455433 245788886 55543211 11122444322 33445443 4689999986
Q ss_pred ChhH-----HHHHHHhCCCCeEEEEcc
Q 029118 171 SEGF-----ISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 171 a~G~-----lldAA~~~GVkRiV~vSS 192 (198)
..|. ..-.+.++| .++|-.|+
T Consensus 80 pag~h~~~~~~~~aa~~G-~~VID~s~ 105 (157)
T d1nvmb1 80 SASAHVQNEALLRQAKPG-IRLIDLTP 105 (157)
T ss_dssp CHHHHHHHHHHHHHHCTT-CEEEECST
T ss_pred CchhHHHhHHHHHHHHcC-CEEEEccc
Confidence 3332 222233445 45666665
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=90.83 E-value=0.13 Score=39.31 Aligned_cols=66 Identities=8% Similarity=-0.102 Sum_probs=46.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
...+++.|.| .|.||+.+++.|..-|.+|.+..|...+.......+ +....++.+.++.+|.|+.+
T Consensus 42 l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~-------~~~~~~l~~~l~~sD~v~~~ 107 (188)
T d2naca1 42 LEAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELN-------LTWHATREDMYPVCDVVTLN 107 (188)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHT-------CEECSSHHHHGGGCSEEEEC
T ss_pred ccccceeecc-ccccchhhhhhhhccCceEEEEeecccccccccccc-------ccccCCHHHHHHhccchhhc
Confidence 4566788777 899999999999998999999987654322111101 22234677889999999753
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=90.79 E-value=0.67 Score=31.90 Aligned_cols=82 Identities=7% Similarity=-0.036 Sum_probs=53.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc-ccccCCceEEEEccCCCHHHHHHhhcCccEEEEc-C--hh-
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-MESFGTYVESMAGDASNKKFLKTALRGVRSIICP-S--EG- 173 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a-~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~-a--~G- 173 (198)
.++|.+.|-.|--=+.+++.|.++|++|.+-++...+. ..+...++++..+.-.+ -+.++|.||.. + ..
T Consensus 8 ~~~ihfiGigG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~~Gi~v~~g~~~~------~i~~~d~vV~S~AI~~~n 81 (96)
T d1p3da1 8 VQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIYIGHAEE------HIEGASVVVVSSAIKDDN 81 (96)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHHTTCEEEESCCGG------GGTTCSEEEECTTSCTTC
T ss_pred CCEEEEEEECHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHHCCCeEEECCccc------cCCCCCEEEECCCcCCCC
Confidence 45677765444222567999999999999999875443 22233457777666422 35788998876 2 22
Q ss_pred HHHHHHHhCCCCe
Q 029118 174 FISNAGSLKGVQH 186 (198)
Q Consensus 174 ~lldAA~~~GVkR 186 (198)
.-+.+|++.|++-
T Consensus 82 pel~~A~~~gipi 94 (96)
T d1p3da1 82 PELVTSKQKRIPV 94 (96)
T ss_dssp HHHHHHHHTTCCE
T ss_pred HHHHHHHHcCCCE
Confidence 3677789988763
|
| >d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain species: Escherichia coli [TaxId: 562]
Probab=90.52 E-value=0.21 Score=33.97 Aligned_cols=51 Identities=12% Similarity=0.061 Sum_probs=37.5
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCC
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN 153 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D 153 (198)
++|.|.| +|.+|+.++.....-|++|+++.-+++... +....+++..++.+
T Consensus 2 k~vgIlG-~GQLgrMl~~Aa~~LG~~v~vldp~~~~pa--~~~a~dvIT~e~E~ 52 (78)
T d3etja2 2 KQVCVLG-NGQLGRMLRQAGEPLGIAVWPVGLDAEPAA--VPFQQSVITAEIER 52 (78)
T ss_dssp EEEEEEB-CSHHHHHHHHHHGGGTEEEEEECTTSCGGG--SCGGGSEEEESSSC
T ss_pred CEEEEEc-CCHHHHHHHHHHHHcCCEEEEEcCCCCCcc--cccccceEEEeecc
Confidence 5788887 699999999999999999999975554322 22234667666664
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=90.52 E-value=0.89 Score=34.04 Aligned_cols=34 Identities=21% Similarity=0.243 Sum_probs=27.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHC--CCcEEEEEeC
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVK--RTRIKALVKD 132 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~--G~~VralvR~ 132 (198)
+++|.|.|+||-||.....-+.+. .++|.+++=+
T Consensus 2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~ 37 (150)
T d1r0ka2 2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTAN 37 (150)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEES
T ss_pred CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeC
Confidence 478999999999999988777554 5788888643
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=90.31 E-value=0.11 Score=40.43 Aligned_cols=65 Identities=12% Similarity=0.068 Sum_probs=46.5
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc-ccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-SFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~-~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
+..+++|.|.| .|.||+.+++.|..-|.+|.+..+....... ..+ + ....++.+.++.+|.|+.+
T Consensus 46 eL~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~--~-------~~~~~l~~ll~~sD~i~~~ 111 (193)
T d1mx3a1 46 RIRGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLSDGVERALG--L-------QRVSTLQDLLFHSDCVTLH 111 (193)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCTTHHHHHT--C-------EECSSHHHHHHHCSEEEEC
T ss_pred eeeCceEEEec-cccccccceeeeeccccceeeccCcccccchhhhc--c-------ccccchhhccccCCEEEEe
Confidence 35678899985 7999999999999999999998765443211 111 1 1223677888889998743
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=90.28 E-value=0.25 Score=35.51 Aligned_cols=36 Identities=19% Similarity=0.200 Sum_probs=31.4
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~ 135 (198)
.++|+|.| .|++|-.++..|...|.+|..+.|.+..
T Consensus 35 ~k~v~VIG-gG~iG~E~A~~l~~~g~~Vtvie~~~~~ 70 (133)
T d1q1ra2 35 DNRLVVIG-GGYIGLEVAATAIKANMHVTLLDTAARV 70 (133)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred CCEEEEEC-CchHHHHHHHHHHhhCcceeeeeecccc
Confidence 46788886 6999999999999999999999987654
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=90.19 E-value=0.2 Score=36.73 Aligned_cols=72 Identities=17% Similarity=0.158 Sum_probs=44.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCcccc--cccCCceEEEEc-cCCC-HHHHHHhh--cCccEEEE
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAM--ESFGTYVESMAG-DASN-KKFLKTAL--RGVRSIIC 169 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~~a~--~~~g~~vevV~G-Dl~D-~~sL~~AL--~GvDaVIh 169 (198)
.++++|+|.|+.| +|...+.++...|. +|.+..+++++.. ..+|. .+++.- +-.+ ...+.+.. .|+|.||-
T Consensus 27 k~g~~VlI~G~Gg-~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GA-d~~in~~~~~~~~~~~~~~~~~~G~d~vid 104 (175)
T d1cdoa2 27 EPGSTCAVFGLGA-VGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGA-TDFVNPNDHSEPISQVLSKMTNGGVDFSLE 104 (175)
T ss_dssp CTTCEEEEECCSH-HHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC-CEEECGGGCSSCHHHHHHHHHTSCBSEEEE
T ss_pred CCCCEEEEEecCC-ccchHHHHHHHHhhchheeecchHHHHHHHHHcCC-cEEEcCCCcchhHHHHHHhhccCCcceeee
Confidence 4677899999755 77777777777765 6777877776643 22442 233322 2111 23444443 58999998
Q ss_pred c
Q 029118 170 P 170 (198)
Q Consensus 170 ~ 170 (198)
+
T Consensus 105 ~ 105 (175)
T d1cdoa2 105 C 105 (175)
T ss_dssp C
T ss_pred e
Confidence 7
|
| >d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GDI-like N domain domain: Guanine nucleotide dissociation inhibitor, GDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=90.05 E-value=0.18 Score=35.70 Aligned_cols=31 Identities=16% Similarity=0.108 Sum_probs=27.9
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCcEEEEEeCC
Q 029118 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 133 (198)
Q Consensus 102 ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~ 133 (198)
|+|.| +|..|...+..|.++|++|.++-|++
T Consensus 8 viViG-aG~~Gl~~A~~La~~G~~V~vlE~~~ 38 (297)
T d2bcgg1 8 VIVLG-TGITECILSGLLSVDGKKVLHIDKQD 38 (297)
T ss_dssp EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred EEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 67777 89999999999999999999998865
|
| >d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Methanothermus fervidus [TaxId: 2180]
Probab=89.98 E-value=0.59 Score=35.50 Aligned_cols=93 Identities=13% Similarity=0.088 Sum_probs=51.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCC-CcEEEEEe-CCccc-ccccCCceEEEEcc-----------CCCHHHHHHhhcCc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVK-DKRNA-MESFGTYVESMAGD-----------ASNKKFLKTALRGV 164 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G-~~VralvR-~~~~a-~~~~g~~vevV~GD-----------l~D~~sL~~AL~Gv 164 (198)
|.+|.|-| -|.||+.++|.|.+++ .+|.++.. .+... ......+....... +.-...+..+++++
T Consensus 1 M~~VgING-fGRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~v 79 (171)
T d1cf2o1 1 MKAVAING-YGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEA 79 (171)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTC
T ss_pred CeEEEEEc-CcHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhcCCceEecccccceeecccCcccCCChhHhhcCC
Confidence 45788886 7999999999987765 56666643 22211 11110111111111 11122455667899
Q ss_pred cEEEEcC-hhH---HHHHHHhCCCCeEEEEccc
Q 029118 165 RSIICPS-EGF---ISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 165 DaVIh~a-~G~---lldAA~~~GVkRiV~vSS~ 193 (198)
|.||-|. ... -++.-.++|+ ++|++|+.
T Consensus 80 DvViEcTG~f~~~~~~~~hl~~G~-K~vi~~~~ 111 (171)
T d1cf2o1 80 DIVIDCTPEGIGAKNLKMYKEKGI-KAIFQGGE 111 (171)
T ss_dssp SEEEECCSTTHHHHHHHHHHHTTC-EEEECTTS
T ss_pred CEEEEccCCCCCHHHHHHHHHcCC-CEEEECCC
Confidence 9999773 211 2333456786 56666553
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=89.77 E-value=0.34 Score=37.08 Aligned_cols=39 Identities=8% Similarity=0.188 Sum_probs=33.8
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCc
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~ 134 (198)
.....++|+|.|| |..|-..+..|..+||+|.++-+++.
T Consensus 39 ~~~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~ 77 (179)
T d1ps9a3 39 PAVQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSE 77 (179)
T ss_dssp SCSSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCCCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCc
Confidence 4555778999985 99999999999999999999998764
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=89.76 E-value=0.21 Score=38.09 Aligned_cols=62 Identities=8% Similarity=0.002 Sum_probs=45.0
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
...++|.|. |.|.||+.+++.|..-|.+|.+..+....... ....+ ..+++.++.+|.|+++
T Consensus 42 l~~~~vgii-G~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~---~~~~~--------~~l~ell~~sDii~i~ 103 (188)
T d1sc6a1 42 ARGKKLGII-GYGHIGTQLGILAESLGMYVYFYDIENKLPLG---NATQV--------QHLSDLLNMSDVVSLH 103 (188)
T ss_dssp STTCEEEEE-CCSHHHHHHHHHHHHTTCEEEEECSSCCCCCT---TCEEC--------SCHHHHHHHCSEEEEC
T ss_pred ccceEEEEe-ecccchhhhhhhcccccceEeeccccccchhh---hhhhh--------hhHHHHHhhccceeec
Confidence 556788888 68999999999999999999999765433211 11111 3677888889999754
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=89.58 E-value=0.34 Score=34.03 Aligned_cols=35 Identities=11% Similarity=-0.025 Sum_probs=30.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~ 134 (198)
.++++|.| .|+||-.++..|...|.+|+.+.|...
T Consensus 22 p~~i~IiG-~G~ig~E~A~~l~~~G~~Vtiv~~~~~ 56 (119)
T d3lada2 22 PGKLGVIG-AGVIGLELGSVWARLGAEVTVLEAMDK 56 (119)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCeEEEEC-CChHHHHHHHHHHHcCCceEEEEeecc
Confidence 35788887 599999999999999999999998764
|
| >d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=89.55 E-value=0.39 Score=36.55 Aligned_cols=92 Identities=16% Similarity=0.092 Sum_probs=52.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCC-CcEEEEEe-CCccc-ccccCCceEEEEccC-----------CCHHHHHHhhcCcc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKR-TRIKALVK-DKRNA-MESFGTYVESMAGDA-----------SNKKFLKTALRGVR 165 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G-~~VralvR-~~~~a-~~~~g~~vevV~GDl-----------~D~~sL~~AL~GvD 165 (198)
.+|.|-| -|.||+.++|.|+.+. .+|.++.- .+... ......+...+..+. .....+..+..++|
T Consensus 3 irIaING-fGRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vD 81 (172)
T d2czca2 3 VKVGVNG-YGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKVD 81 (172)
T ss_dssp EEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTCS
T ss_pred EEEEEEC-CCHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhhcCceeecccccceeeecccCccccchhhhhhccCC
Confidence 4788888 5999999999998754 67777653 22211 111111123333222 22334555678999
Q ss_pred EEEEcChhH----HHHHHHhCCCCeEEEEccc
Q 029118 166 SIICPSEGF----ISNAGSLKGVQHVILLSQG 193 (198)
Q Consensus 166 aVIh~a~G~----lldAA~~~GVkRiV~vSS~ 193 (198)
.||=|...+ -++.-.++|+| .|++|+.
T Consensus 82 vViEcTG~f~~~~~~~~hl~~G~k-~Vi~s~~ 112 (172)
T d2czca2 82 IIVDATPGGIGAKNKPLYEKAGVK-AIFQGGE 112 (172)
T ss_dssp EEEECCSTTHHHHHHHHHHHHTCE-EEECTTS
T ss_pred EEEECCCCCCCHHHHHHHHHcCCC-EEEECCC
Confidence 999773222 23334577874 5556653
|
| >d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, C-terminal domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=89.54 E-value=0.29 Score=35.26 Aligned_cols=40 Identities=5% Similarity=0.001 Sum_probs=32.5
Q ss_pred cCCCCeEEEE-cCCChHHHHHHHHHHHCCCcEEEEEeCCcc
Q 029118 96 EEARDAVLVT-DGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (198)
Q Consensus 96 ~~~~~~ILVT-GATGfIG~~Vvr~Ll~~G~~VralvR~~~~ 135 (198)
..+++.++|. .+.|+||-.++..|.++|++|+.+.|.+..
T Consensus 36 ~~~~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~~ 76 (156)
T d1djqa2 36 KKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHLA 76 (156)
T ss_dssp SCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCTT
T ss_pred cccCCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcc
Confidence 4556666665 356999999999999999999999987643
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=89.53 E-value=0.23 Score=35.13 Aligned_cols=35 Identities=9% Similarity=0.032 Sum_probs=30.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~ 134 (198)
.++|+|.| .|++|-.++..|...|.+|+++.|.+.
T Consensus 22 p~~v~IiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~~ 56 (117)
T d1onfa2 22 SKKIGIVG-SGYIAVELINVIKRLGIDSYIFARGNR 56 (117)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSSS
T ss_pred CCEEEEEC-CchHHHHHHHHHHhccccceeeehhcc
Confidence 35788887 599999999999999999999998654
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=89.35 E-value=0.33 Score=34.40 Aligned_cols=32 Identities=16% Similarity=0.067 Sum_probs=28.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeC
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD 132 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~ 132 (198)
++++|.| .|+||-.++..|.+.|.+|+++.|+
T Consensus 21 ~~vvIIG-gG~iG~E~A~~l~~lG~~Vtii~~~ 52 (122)
T d1h6va2 21 GKTLVVG-ASYVALECAGFLAGIGLDVTVMVRS 52 (122)
T ss_dssp CSEEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CeEEEEC-CCccHHHHHHHHhhcCCeEEEEEec
Confidence 4677777 5999999999999999999999875
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=89.35 E-value=0.44 Score=33.63 Aligned_cols=37 Identities=14% Similarity=0.117 Sum_probs=31.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~ 135 (198)
..++|+|.| .|++|-.++..|.+.|++|+++.|.+..
T Consensus 29 ~~k~vvViG-gG~iG~E~A~~l~~~g~~Vtlie~~~~~ 65 (123)
T d1nhpa2 29 EVNNVVVIG-SGYIGIEAAEAFAKAGKKVTVIDILDRP 65 (123)
T ss_dssp TCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CCCEEEEEC-ChHHHHHHHHHhhccceEEEEEEecCcc
Confidence 355788775 6899999999999999999999887643
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=89.13 E-value=0.25 Score=34.85 Aligned_cols=34 Identities=12% Similarity=0.113 Sum_probs=29.3
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~ 134 (198)
++++|.| .|++|-.++..|...|++|+++.|.+.
T Consensus 33 ~~vvIiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~~ 66 (122)
T d1xhca2 33 GEAIIIG-GGFIGLELAGNLAEAGYHVKLIHRGAM 66 (122)
T ss_dssp SEEEEEE-CSHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred CcEEEEC-CcHHHHHHHHHhhcccceEEEEecccc
Confidence 5677776 599999999999999999999987654
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=89.06 E-value=0.33 Score=34.36 Aligned_cols=35 Identities=6% Similarity=-0.027 Sum_probs=30.8
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~ 135 (198)
++++|.| .|+||-.++..|...|.+|.++.|.+..
T Consensus 24 ~~~vIiG-~G~ig~E~A~~l~~lG~~Vtii~~~~~~ 58 (122)
T d1v59a2 24 KRLTIIG-GGIIGLEMGSVYSRLGSKVTVVEFQPQI 58 (122)
T ss_dssp SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CeEEEEC-CCchHHHHHHHHHhhCcceeEEEecccc
Confidence 5788887 5999999999999999999999987654
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=89.01 E-value=0.34 Score=33.84 Aligned_cols=35 Identities=11% Similarity=-0.064 Sum_probs=29.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~ 135 (198)
++|+|.| .|++|-.++..|.+.|++|.++.|.+..
T Consensus 22 ~~vvIiG-gG~ig~E~A~~l~~~G~~Vtlve~~~~~ 56 (116)
T d1gesa2 22 ERVAVVG-AGYIGVELGGVINGLGAKTHLFEMFDAP 56 (116)
T ss_dssp SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CEEEEEC-CChhhHHHHHHhhccccEEEEEeecchh
Confidence 4677776 5999999999999999999999887643
|
| >d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=88.78 E-value=0.27 Score=35.84 Aligned_cols=35 Identities=11% Similarity=0.139 Sum_probs=29.9
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~ 134 (198)
.|+|+|.| .|.-|-..+.+|.++|++|.++-+++.
T Consensus 1 ~KkV~IIG-aG~aGL~aA~~La~~G~~V~vlE~~~~ 35 (373)
T d1seza1 1 AKRVAVIG-AGVSGLAAAYKLKIHGLNVTVFEAEGK 35 (373)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHTTSCEEEEECSSSS
T ss_pred CCEEEEEC-cCHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 36799997 599999999999999999999976553
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=88.64 E-value=0.2 Score=38.67 Aligned_cols=66 Identities=11% Similarity=-0.003 Sum_probs=45.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
..++++.|.| .|.||+.+++.|..-|.+|.+..+.......... .. ....+++.+.++.+|.|+.+
T Consensus 45 l~g~tvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~--~~-----~~~~~~l~~ll~~sD~v~l~ 110 (191)
T d1gdha1 45 LDNKTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHRASSSDEAS--YQ-----ATFHDSLDSLLSVSQFFSLN 110 (191)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHH--HT-----CEECSSHHHHHHHCSEEEEC
T ss_pred ecccceEEee-cccchHHHHHHHHhhccccccccccccccchhhc--cc-----ccccCCHHHHHhhCCeEEec
Confidence 4567888886 7999999999999999999998765543221110 00 11123678889999998743
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.57 E-value=0.37 Score=34.08 Aligned_cols=34 Identities=6% Similarity=0.111 Sum_probs=30.1
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~ 134 (198)
++++|.|| |+||-.++..|.+.|.+|+.+.|.+.
T Consensus 23 k~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~~ 56 (125)
T d3grsa2 23 GRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHDK 56 (125)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CEEEEEcC-CccHHHHHHHHhcCCcEEEEEeeccc
Confidence 57888875 89999999999999999999998764
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=88.49 E-value=0.22 Score=37.66 Aligned_cols=34 Identities=18% Similarity=0.189 Sum_probs=27.6
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHC--CCcEEEEEeC
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVK--RTRIKALVKD 132 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~--G~~VralvR~ 132 (198)
|++|.|.|+||-||...+.-+.+. .++|.+++=+
T Consensus 1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~ 36 (151)
T d1q0qa2 1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAG 36 (151)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEES
T ss_pred CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEec
Confidence 467999999999999998877664 4788888743
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=88.37 E-value=0.3 Score=33.94 Aligned_cols=34 Identities=12% Similarity=0.163 Sum_probs=29.2
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~ 134 (198)
++++|.| .|++|-.++..|.+.|++|+++.|.+.
T Consensus 22 ~~vvIiG-gG~~G~E~A~~l~~~g~~Vtlve~~~~ 55 (115)
T d1lvla2 22 QHLVVVG-GGYIGLELGIAYRKLGAQVSVVEARER 55 (115)
T ss_dssp SEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CeEEEEC-CCHHHHHHHHHHhhcccceEEEeeecc
Confidence 5677775 699999999999999999999988664
|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=88.04 E-value=0.36 Score=33.31 Aligned_cols=39 Identities=18% Similarity=0.059 Sum_probs=32.4
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~ 135 (198)
..+.++|+|.| .|+||-.++..|...|.+|.++.|.+.-
T Consensus 19 ~~~~~~vvVvG-gG~ig~E~A~~l~~~g~~vt~i~~~~~~ 57 (121)
T d1mo9a2 19 YEPGSTVVVVG-GSKTAVEYGCFFNATGRRTVMLVRTEPL 57 (121)
T ss_dssp SCCCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCTT
T ss_pred hCCCCEEEEEC-CCHHHHHHHHHHHhcchhheEeeccchh
Confidence 34567788776 6999999999999999999999987643
|
| >d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: UDP-glucose dehydrogenase (UDPGDH) species: Streptococcus pyogenes [TaxId: 1314]
Probab=87.86 E-value=0.17 Score=38.05 Aligned_cols=35 Identities=9% Similarity=0.078 Sum_probs=28.6
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA 136 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a 136 (198)
|+|.|.| .|++|..++. ++++||+|.++.-+++..
T Consensus 1 MkI~ViG-lG~vGl~~a~-~~a~g~~V~g~Din~~~v 35 (196)
T d1dlja2 1 MKIAVAG-SGYVGLSLGV-LLSLQNEVTIVDILPSKV 35 (196)
T ss_dssp CEEEEEC-CSHHHHHHHH-HHTTTSEEEEECSCHHHH
T ss_pred CEEEEEC-CChhHHHHHH-HHHCCCcEEEEECCHHHH
Confidence 6799996 8999999875 557899999998776543
|
| >d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Klebsiella pneumoniae [TaxId: 573]
Probab=87.37 E-value=0.38 Score=38.99 Aligned_cols=35 Identities=11% Similarity=0.177 Sum_probs=30.3
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~ 134 (198)
.++|+|.| +|.-|...+..|.++|++|.++-++..
T Consensus 2 ~KKI~IIG-aG~sGL~aA~~L~k~G~~V~viEk~~~ 36 (314)
T d2bi7a1 2 SKKILIVG-AGFSGAVIGRQLAEKGHQVHIIDQRDH 36 (314)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCEEEEEC-CcHHHHHHHHHHHhCCCCEEEEECCCC
Confidence 57899888 599999999999999999999987654
|
| >d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Lysine-specific histone demethylase 1, LSD1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.36 E-value=0.48 Score=34.63 Aligned_cols=36 Identities=11% Similarity=0.064 Sum_probs=30.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCC
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 133 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~ 133 (198)
....+|+|.| +|.-|-..+.+|.++|++|.++-++.
T Consensus 3 ~~~~kViVIG-aG~aGL~aA~~L~~~G~~V~VlEa~~ 38 (449)
T d2dw4a2 3 KKTGKVIIIG-SGVSGLAAARQLQSFGMDVTLLEARD 38 (449)
T ss_dssp SCCCEEEEEC-CBHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCCcEEEEC-CCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 3456799998 59999999999999999999996543
|
| >d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=87.11 E-value=0.78 Score=31.43 Aligned_cols=38 Identities=13% Similarity=-0.028 Sum_probs=29.7
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~ 134 (198)
...+++|+|.|+ |.-|.-++..|.....+|..+.|.+.
T Consensus 29 ~f~gK~VlVVG~-g~Sa~dia~~l~~~ak~v~~~~~r~~ 66 (107)
T d2gv8a2 29 LFVGESVLVVGG-ASSANDLVRHLTPVAKHPIYQSLLGG 66 (107)
T ss_dssp GGTTCCEEEECS-SHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred hcCCCeEEEECC-CCCHHHHHHHHHHhcCEEEEEEecCc
Confidence 456788999985 69999999999887777766666543
|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glycine oxidase ThiO species: Bacillus sp. [TaxId: 1409]
Probab=86.89 E-value=0.35 Score=36.90 Aligned_cols=31 Identities=13% Similarity=0.148 Sum_probs=27.8
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCcEEEEEeCC
Q 029118 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 133 (198)
Q Consensus 102 ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~ 133 (198)
|+|.| .|.+|..++.+|.++|++|.++.|+.
T Consensus 7 vvIIG-aGi~Gls~A~~La~~G~~V~vlE~~~ 37 (276)
T d1ryia1 7 AVVIG-GGIIGSAIAYYLAKENKNTALFESGT 37 (276)
T ss_dssp EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 78887 59999999999999999999998754
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=86.79 E-value=0.4 Score=33.56 Aligned_cols=34 Identities=12% Similarity=0.174 Sum_probs=27.1
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCC--cEEEEEeCC
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDK 133 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~--~VralvR~~ 133 (198)
+++|+|.|| |++|-.++..|.+.++ +|+++.+++
T Consensus 2 gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~ 37 (186)
T d1fcda1 2 GRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT 37 (186)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence 578999985 9999999999999886 556665544
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=86.69 E-value=0.36 Score=36.31 Aligned_cols=37 Identities=11% Similarity=0.114 Sum_probs=31.1
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCC
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 133 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~ 133 (198)
..+.++|+|.|| |..|-..+..|.++|++|.++-+++
T Consensus 27 ~~~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~ 63 (370)
T d2iida1 27 TSNPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE 63 (370)
T ss_dssp CSSCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 334568999984 8999999999999999999998755
|
| >d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, middle domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=86.30 E-value=0.63 Score=35.44 Aligned_cols=39 Identities=13% Similarity=0.195 Sum_probs=33.1
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCc
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~ 134 (198)
.....++|+|.|| |..|-..+..|..+|++|+++.++.+
T Consensus 45 ~~~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~~ 83 (233)
T d1djqa3 45 QTKNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAEK 83 (233)
T ss_dssp CCSSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred cccCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeeccc
Confidence 3456778999985 99999999999999999999987653
|
| >d1uwva2 c.66.1.40 (A:75-432) rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: (Uracil-5-)-methyltransferase domain: rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain species: Escherichia coli [TaxId: 562]
Probab=86.25 E-value=0.26 Score=40.38 Aligned_cols=90 Identities=12% Similarity=0.044 Sum_probs=59.7
Q ss_pred CCeEE-EEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc------cccC-CceEEEEccCCCHH-HHHHhhcCccEEEE
Q 029118 99 RDAVL-VTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM------ESFG-TYVESMAGDASNKK-FLKTALRGVRSIIC 169 (198)
Q Consensus 99 ~~~IL-VTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~------~~~g-~~vevV~GDl~D~~-sL~~AL~GvDaVIh 169 (198)
.++|+ .-.|+|.++..++ .++.+|.++--+++... ...+ .+++++.+|..+.- .........|.||.
T Consensus 213 ~~~vlDLycG~G~fsl~La----~~~~~V~gvE~~~~ai~~A~~na~~n~i~n~~~~~~~~~~~~~~~~~~~~~~d~vil 288 (358)
T d1uwva2 213 EDRVLDLFCGMGNFTLPLA----TQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLL 288 (358)
T ss_dssp TCEEEEESCTTTTTHHHHH----TTSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEE
T ss_pred CceEEEecccccccchhcc----ccccEEEeccCcHHHHHHHHHhHHhcccccceeeecchhhhhhhhhhhhccCceEEe
Confidence 44555 7899999996654 46789999976654321 1112 46899999987632 22233355688876
Q ss_pred -c-Chh--HHHHHHHhCCCCeEEEEcc
Q 029118 170 -P-SEG--FISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 170 -~-a~G--~lldAA~~~GVkRiV~vSS 192 (198)
| ..| .++++..+.+++||||+|-
T Consensus 289 DPPR~G~~~~~~~l~~~~~~~ivYVSC 315 (358)
T d1uwva2 289 DPARAGAAGVMQQIIKLEPIRIVYVSC 315 (358)
T ss_dssp CCCTTCCHHHHHHHHHHCCSEEEEEES
T ss_pred CCCCccHHHHHHHHHHcCCCEEEEEeC
Confidence 3 333 3677777778999999993
|
| >d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=86.14 E-value=0.57 Score=33.45 Aligned_cols=35 Identities=14% Similarity=0.078 Sum_probs=28.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~ 134 (198)
.++|+|.| .|++|-.++..|...|++|.++.+.+.
T Consensus 3 ~~~VvIIG-gG~~G~e~A~~l~~~g~~v~v~~~~~~ 37 (185)
T d1q1ra1 3 NDNVVIVG-TGLAGVEVAFGLRASGWEGNIRLVGDA 37 (185)
T ss_dssp SCEEEEEC-CSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCCEEEEC-CcHHHHHHHHHHHHcCCceEEEEecCc
Confidence 45677776 699999999999999999888876553
|
| >d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Polyamine oxidase species: Maize (Zea mays) [TaxId: 4577]
Probab=86.12 E-value=0.49 Score=33.14 Aligned_cols=33 Identities=15% Similarity=0.057 Sum_probs=27.8
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCc
Q 029118 101 AVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR 134 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~ 134 (198)
+|+|.| .|..|-..+..|.++|+ +|+++-+++.
T Consensus 2 ~V~IIG-aG~aGL~aA~~L~~~G~~~V~vlE~~~~ 35 (347)
T d1b5qa1 2 RVIVVG-AGMSGISAAKRLSEAGITDLLILEATDH 35 (347)
T ss_dssp CEEEEC-CBHHHHHHHHHHHHTTCCCEEEECSSSS
T ss_pred CEEEEC-CcHHHHHHHHHHHhCCCCcEEEEECCCC
Confidence 588888 49999999999999995 7999987653
|
| >d1wbha1 c.1.10.1 (A:1-213) KDPG aldolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Aldolase family: Class I aldolase domain: KDPG aldolase species: Escherichia coli [TaxId: 562]
Probab=85.95 E-value=2 Score=33.87 Aligned_cols=85 Identities=12% Similarity=0.099 Sum_probs=64.0
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCcEEEEE-eCCccc------ccccCCceEEEEccCCCHHHHHHhh-cCccEEEEc-Ch
Q 029118 102 VLVTDGDSDIGQMVILSLIVKRTRIKALV-KDKRNA------MESFGTYVESMAGDASNKKFLKTAL-RGVRSIICP-SE 172 (198)
Q Consensus 102 ILVTGATGfIG~~Vvr~Ll~~G~~Vralv-R~~~~a------~~~~g~~vevV~GDl~D~~sL~~AL-~GvDaVIh~-a~ 172 (198)
-+|++-+---...+++.|++.|.++.=+. |.+... .+.+ +++.+=.|.+.|++++++|. .|++.++.| ..
T Consensus 19 pvlr~~~~~~a~~~~~al~~~Gi~~iEitl~tp~a~~~I~~l~~~~-p~~~vGaGTV~~~~~~~~a~~aGa~FivSP~~~ 97 (213)
T d1wbha1 19 PVIVVKKLEHAVPMAKALVAGGVRVLNVTLRTECAVDAIRAIAKEV-PEAIVGAGTVLNPQQLAEVTEAGAQFAISPGLT 97 (213)
T ss_dssp EEECCSSGGGHHHHHHHHHHTTCCEEEEESCSTTHHHHHHHHHHHC-TTSEEEEESCCSHHHHHHHHHHTCSCEEESSCC
T ss_pred EEEECCCHHHHHHHHHHHHHCCCCEEEEeCCChhHHHHHHHHHHHC-CCCeeeccccccHHHHHHHHHCCCcEEECCCCC
Confidence 35778888889999999999999988887 444321 1223 46888999999999999998 599999998 33
Q ss_pred hHHHHHHHhCCCCeE
Q 029118 173 GFISNAGSLKGVQHV 187 (198)
Q Consensus 173 G~lldAA~~~GVkRi 187 (198)
-.++++|+++++.-+
T Consensus 98 ~~v~~~a~~~~i~~i 112 (213)
T d1wbha1 98 EPLLKAATEGTIPLI 112 (213)
T ss_dssp HHHHHHHHHSSSCEE
T ss_pred HHHHHHHHhcCCCcc
Confidence 346666666665544
|
| >d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Probable oxidoreductase At4g09670 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=85.90 E-value=1.2 Score=32.65 Aligned_cols=65 Identities=12% Similarity=0.103 Sum_probs=40.0
Q ss_pred CeEEEEcCCChHHHHHHHHHHHC-CCcEEEEE-eCCccccc---ccC--CceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVK-RTRIKALV-KDKRNAME---SFG--TYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~-G~~Vralv-R~~~~a~~---~~g--~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
.+|.|.| .|.+|+..++.|... +.+|++++ ++++++.. .++ ....+ +.|.+.+-+ -..+|+|+.+
T Consensus 2 iki~iIG-~G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~----~~~~~~ll~-~~~iD~v~I~ 73 (184)
T d1ydwa1 2 IRIGVMG-CADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKI----HGSYESLLE-DPEIDALYVP 73 (184)
T ss_dssp EEEEEES-CCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEE----ESSHHHHHH-CTTCCEEEEC
T ss_pred eEEEEEc-CCHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccccceee----cCcHHHhhh-ccccceeeec
Confidence 4789999 588999999888765 67888774 55544321 122 22222 234444332 2468999876
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=85.76 E-value=0.4 Score=37.20 Aligned_cols=33 Identities=18% Similarity=0.306 Sum_probs=23.1
Q ss_pred CeEEEEcC-C-ChH--HHHHHHHHHHCCCcEEEEEeC
Q 029118 100 DAVLVTDG-D-SDI--GQMVILSLIVKRTRIKALVKD 132 (198)
Q Consensus 100 ~~ILVTGA-T-GfI--G~~Vvr~Ll~~G~~VralvR~ 132 (198)
++|||++| | |++ ...|+++|.++||+|..+...
T Consensus 1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~ 37 (351)
T d1f0ka_ 1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTA 37 (351)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence 46777663 4 444 334778998999999988743
|
| >d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=85.64 E-value=0.24 Score=37.02 Aligned_cols=40 Identities=10% Similarity=0.114 Sum_probs=32.0
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM 137 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~ 137 (198)
+...++|||.|| |.+++.++..|...| +|.++.|+++++.
T Consensus 15 ~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~ 54 (177)
T d1nvta1 15 RVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAE 54 (177)
T ss_dssp CCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHH
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHH
Confidence 356789999987 568999999987666 8999999877653
|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=85.40 E-value=0.52 Score=36.22 Aligned_cols=65 Identities=14% Similarity=0.040 Sum_probs=52.6
Q ss_pred CCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEc
Q 029118 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 97 ~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
..+++++|.| =|.+|+-+++.|...|.+|.+.-.||-++.+..-.+.+++ .+++|++-.|.+|.+
T Consensus 21 laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA~mdGf~v~--------~~~~a~~~aDi~vTa 85 (163)
T d1v8ba1 21 ISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFNVV--------TLDEIVDKGDFFITC 85 (163)
T ss_dssp CTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCEEC--------CHHHHTTTCSEEEEC
T ss_pred ecCCEEEEec-ccccchhHHHHHHhCCCEEEEEecCchhhHHHHhcCCccC--------chhHccccCcEEEEc
Confidence 3567777776 6999999999999999999999999977766555556654 457899999999876
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=85.29 E-value=5.1 Score=30.56 Aligned_cols=95 Identities=11% Similarity=0.030 Sum_probs=59.9
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCCc-EEEEEeCC---cccc----------------------cccCCceEEEE
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDK---RNAM----------------------ESFGTYVESMA 148 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~-VralvR~~---~~a~----------------------~~~g~~vevV~ 148 (198)
+.....+|+|.| .|-+|++++..|...|.. +++++.+. +... ....+.+++..
T Consensus 26 ~kL~~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~ 104 (247)
T d1jw9b_ 26 EALKDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITP 104 (247)
T ss_dssp HHHHHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEE
T ss_pred HHHhCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhh
Confidence 356678999999 566999999999999985 44444222 1100 01124455554
Q ss_pred ccC-CCHHHHHHhhcCccEEEEcChh-----HHHHHHHhCCCCeEEEEc
Q 029118 149 GDA-SNKKFLKTALRGVRSIICPSEG-----FISNAGSLKGVQHVILLS 191 (198)
Q Consensus 149 GDl-~D~~sL~~AL~GvDaVIh~a~G-----~lldAA~~~GVkRiV~vS 191 (198)
.+. -+.......+...|.||.+... .+-++|.++++. +|+.+
T Consensus 105 ~~~~~~~~~~~~~~~~~divid~~d~~~~~~~in~~~~~~~ip-~i~g~ 152 (247)
T d1jw9b_ 105 VNALLDDAELAALIAEHDLVLDCTDNVAVRNQLNAGCFAAKVP-LVSGA 152 (247)
T ss_dssp ECSCCCHHHHHHHHHTSSEEEECCSSHHHHHHHHHHHHHHTCC-EEEEE
T ss_pred hhhhhhhccccccccccceeeeccchhhhhhhHHHHHHHhCCC-ccccc
Confidence 443 2455667778899999987321 266778888876 44443
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=84.74 E-value=0.47 Score=33.47 Aligned_cols=36 Identities=8% Similarity=-0.063 Sum_probs=30.8
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~ 135 (198)
.++++|.| .|+||-.++..|...|.+|+++-|.+..
T Consensus 25 p~~~viiG-~G~iglE~A~~~~~~G~~Vtvi~~~~~~ 60 (123)
T d1dxla2 25 PKKLVVIG-AGYIGLEMGSVWGRIGSEVTVVEFASEI 60 (123)
T ss_dssp CSEEEESC-CSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCeEEEEc-cchHHHHHHHHHHhcCCeEEEEEEcccc
Confidence 35677776 5999999999999999999999987754
|
| >d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=84.43 E-value=3.1 Score=30.25 Aligned_cols=87 Identities=11% Similarity=0.106 Sum_probs=58.6
Q ss_pred CCCeEEEEcCCC----------hHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhh--cCcc
Q 029118 98 ARDAVLVTDGDS----------DIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL--RGVR 165 (198)
Q Consensus 98 ~~~~ILVTGATG----------fIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL--~GvD 165 (198)
..++|||.|+-. +-+.+.++.|.+.|+++..+--||+.....+. -..-+...-...+.+.+.+ +..|
T Consensus 3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~d-~aD~lYfeplt~e~v~~Ii~~E~p~ 81 (121)
T d1a9xa4 3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYD-TSDRLYFEPVTLEDVLEIVRIEKPK 81 (121)
T ss_dssp SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTSTT-SSSEEECCCCSHHHHHHHHHHHCCS
T ss_pred CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcChh-hcCceEEccCCHHHHHHHHHHhCCC
Confidence 467899999854 67889999999999999999777765433222 1233444445667777765 5789
Q ss_pred EEEEcChh-H---HHHHHHhCCCC
Q 029118 166 SIICPSEG-F---ISNAGSLKGVQ 185 (198)
Q Consensus 166 aVIh~a~G-~---lldAA~~~GVk 185 (198)
+||...-| + +.....+.||+
T Consensus 82 ~ii~~~GGQtalnla~~L~~~gv~ 105 (121)
T d1a9xa4 82 GVIVQYGGQTPLKLARALEAAGVP 105 (121)
T ss_dssp EEECSSSTHHHHTTHHHHHHTTCC
T ss_pred EEEeehhhhhHHHHHHHHHHcCCc
Confidence 99877322 1 33344566765
|
| >d1wa3a1 c.1.10.1 (A:2-203) KDPG aldolase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Aldolase family: Class I aldolase domain: KDPG aldolase species: Thermotoga maritima [TaxId: 2336]
Probab=84.14 E-value=1.7 Score=33.81 Aligned_cols=91 Identities=13% Similarity=0.053 Sum_probs=67.3
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCcEEEEE-eCCcccc------cccCCceEEEEccCCCHHHHHHhh-cCccEEEEc-Ch
Q 029118 102 VLVTDGDSDIGQMVILSLIVKRTRIKALV-KDKRNAM------ESFGTYVESMAGDASNKKFLKTAL-RGVRSIICP-SE 172 (198)
Q Consensus 102 ILVTGATGfIG~~Vvr~Ll~~G~~Vralv-R~~~~a~------~~~g~~vevV~GDl~D~~sL~~AL-~GvDaVIh~-a~ 172 (198)
-+|++-+---...+++.|++.|.++.=+. |++.... ..+++++.+=.|.+.|++++++|. .|++.++.+ ..
T Consensus 13 pvlr~~~~~~a~~~~~al~~~Gi~~iEitlr~p~a~~~i~~l~~~~~~~~~vGaGTV~~~~~~~~a~~aGa~fivsP~~~ 92 (202)
T d1wa3a1 13 AVLRANSVEEAKEKALAVFEGGVHLIEITFTVPDADTVIKELSFLKEKGAIIGAGTVTSVEQCRKAVESGAEFIVSPHLD 92 (202)
T ss_dssp EEECCSSHHHHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHTHHHHHTTCEEEEESCCSHHHHHHHHHHTCSEEECSSCC
T ss_pred EEEECCCHHHHHHHHHHHHHcCCCEEEEecCCccHHHHHHHHHHhcCCCcEEEecccccHHHHHHHHhhcccEEeCCCCc
Confidence 34788888889999999999999887665 5554321 123466778889999999999998 599999988 33
Q ss_pred hHHHHHHHhCCCCeEEEEcc
Q 029118 173 GFISNAGSLKGVQHVILLSQ 192 (198)
Q Consensus 173 G~lldAA~~~GVkRiV~vSS 192 (198)
-.++++|+++++.-+-=+++
T Consensus 93 ~~v~~~~~~~~i~~iPGv~T 112 (202)
T d1wa3a1 93 EEISQFCKEKGVFYMPGVMT 112 (202)
T ss_dssp HHHHHHHHHHTCEEECEECS
T ss_pred HHHHHHHHhcCCceeCCcCc
Confidence 44777777777755544443
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=82.75 E-value=0.78 Score=32.63 Aligned_cols=36 Identities=11% Similarity=0.025 Sum_probs=30.7
Q ss_pred CCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~ 135 (198)
.++++|.| .|+||-.++..+...|.+|+.+.|.+.-
T Consensus 26 p~~vvIiG-gG~IG~E~A~~~~~~G~~Vtive~~~~i 61 (125)
T d1ojta2 26 PGKLLIIG-GGIIGLEMGTVYSTLGSRLDVVEMMDGL 61 (125)
T ss_dssp CSEEEEES-CSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCeEEEEC-CCHHHHHHHHHhhcCCCEEEEEEeeccc
Confidence 35788887 5999999999999999999999886643
|
| >d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Clostridium symbiosum [TaxId: 1512]
Probab=82.57 E-value=0.62 Score=37.73 Aligned_cols=34 Identities=9% Similarity=-0.023 Sum_probs=30.7
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEE
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALV 130 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~Vralv 130 (198)
+..+++|+|.| -|.+|+++++.|.+.|.+|+++.
T Consensus 33 ~l~g~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs 66 (255)
T d1bgva1 33 TLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLS 66 (255)
T ss_dssp CSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence 45678999999 69999999999999999999885
|
| >d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Sarcosine oxidase species: Bacillus sp., strain b0618 [TaxId: 1409]
Probab=82.48 E-value=0.73 Score=35.25 Aligned_cols=31 Identities=13% Similarity=0.097 Sum_probs=27.3
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCcEEEEEeCC
Q 029118 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 133 (198)
Q Consensus 102 ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~ 133 (198)
|+|.| .|.+|..++.+|.++|++|.++.|..
T Consensus 6 vvIIG-aGi~Gls~A~~La~~G~~V~viE~~~ 36 (281)
T d2gf3a1 6 VIVVG-AGSMGMAAGYQLAKQGVKTLLVDAFD 36 (281)
T ss_dssp EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 67776 59999999999999999999998753
|
| >d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=82.45 E-value=0.77 Score=36.57 Aligned_cols=36 Identities=6% Similarity=0.186 Sum_probs=30.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHHHHCC--CcEEEEEeCCc
Q 029118 98 ARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKR 134 (198)
Q Consensus 98 ~~~~ILVTGATGfIG~~Vvr~Ll~~G--~~VralvR~~~ 134 (198)
+.++|+|.| .|.-|-..+..|+++| ++|+++-|+..
T Consensus 3 ~~KrVaIIG-aG~sGl~~A~~L~~~~~~~~v~vfEk~~~ 40 (335)
T d2gv8a1 3 TIRKIAIIG-AGPSGLVTAKALLAEKAFDQVTLFERRGS 40 (335)
T ss_dssp SCCEEEEEC-CSHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred CCCeEEEEC-cCHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence 467899997 4999999999998876 69999988754
|
| >d1mxsa_ c.1.10.1 (A:) KDPG aldolase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Aldolase family: Class I aldolase domain: KDPG aldolase species: Pseudomonas putida [TaxId: 303]
Probab=82.39 E-value=2.6 Score=33.28 Aligned_cols=85 Identities=13% Similarity=0.093 Sum_probs=64.5
Q ss_pred EEEEcCCChHHHHHHHHHHHCCCcEEEEE-eCCccc------ccccCCceEEEEccCCCHHHHHHhh-cCccEEEEc-Ch
Q 029118 102 VLVTDGDSDIGQMVILSLIVKRTRIKALV-KDKRNA------MESFGTYVESMAGDASNKKFLKTAL-RGVRSIICP-SE 172 (198)
Q Consensus 102 ILVTGATGfIG~~Vvr~Ll~~G~~Vralv-R~~~~a------~~~~g~~vevV~GDl~D~~sL~~AL-~GvDaVIh~-a~ 172 (198)
-+|++.+---...+++.|++.|.++.=+. |++... .+.+ +++.+=.|.+.|+++++++. .|++.++.+ ..
T Consensus 21 pvl~~~~~~~a~~~~~al~~~Gi~~iEitl~~p~a~~~i~~l~~~~-p~~~vGaGTV~~~~~~~~a~~aGa~FivsP~~~ 99 (216)
T d1mxsa_ 21 PVITIAREEDILPLADALAAGGIRTLEVTLRSQHGLKAIQVLREQR-PELCVGAGTVLDRSMFAAVEAAGAQFVVTPGIT 99 (216)
T ss_dssp EEECCSCGGGHHHHHHHHHHTTCCEEEEESSSTHHHHHHHHHHHHC-TTSEEEEECCCSHHHHHHHHHHTCSSEECSSCC
T ss_pred EEEECCCHHHHHHHHHHHHHCCCCEEEEeCCChhHHHHHHHHHHhC-CCcceeeeeeecHHHHHHHHhCCCCEEECCCCc
Confidence 45677788888999999999999887776 455321 1223 46889999999999999999 699999998 33
Q ss_pred hHHHHHHHhCCCCeE
Q 029118 173 GFISNAGSLKGVQHV 187 (198)
Q Consensus 173 G~lldAA~~~GVkRi 187 (198)
-.++++|++.++..+
T Consensus 100 ~~v~~~a~~~~i~~i 114 (216)
T d1mxsa_ 100 EDILEAGVDSEIPLL 114 (216)
T ss_dssp HHHHHHHHHCSSCEE
T ss_pred HHHHHHHHhcCCCcc
Confidence 447777777766554
|
| >d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=82.30 E-value=2 Score=32.70 Aligned_cols=75 Identities=11% Similarity=0.109 Sum_probs=50.1
Q ss_pred ccCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCce---EEEEccC--CCHHHHHHhhcCccEEEE
Q 029118 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYV---ESMAGDA--SNKKFLKTALRGVRSIIC 169 (198)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~v---evV~GDl--~D~~sL~~AL~GvDaVIh 169 (198)
.+..++.++|.|-+--+|+.++..|+.+|..|.....+....... ...+ .....|+ -.++.+++....+|.||.
T Consensus 25 ~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~lk~~~~~aDIvIs 103 (171)
T d1edza1 25 NRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTR-GESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVIT 103 (171)
T ss_dssp CTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEES-CCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEE
T ss_pred CCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEecccccccccc-ccceeeeeeccccccccchhHHhhccccCCEEEE
Confidence 367789999999999999999999999999998664332110000 0000 0111122 346678888888999986
Q ss_pred c
Q 029118 170 P 170 (198)
Q Consensus 170 ~ 170 (198)
.
T Consensus 104 a 104 (171)
T d1edza1 104 G 104 (171)
T ss_dssp C
T ss_pred c
Confidence 5
|
| >d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Thermotoga maritima [TaxId: 2336]
Probab=81.98 E-value=0.56 Score=34.88 Aligned_cols=65 Identities=9% Similarity=0.061 Sum_probs=38.8
Q ss_pred CeEEEEcCCChHHHHHHHH-HHH--C---CCcEEEEEeCCcccccc-------cCCceEEEEccCCCHHHHHHhhcCccE
Q 029118 100 DAVLVTDGDSDIGQMVILS-LIV--K---RTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALRGVRS 166 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~-Ll~--~---G~~VralvR~~~~a~~~-------~g~~vevV~GDl~D~~sL~~AL~GvDa 166 (198)
++|.|.|| |.+|...+-. |+. . ..++..+..+++++... ......+... + ...++++|+|.
T Consensus 1 mKIaiIGa-Gs~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~~~t--~---~~~~~l~~aDv 74 (162)
T d1up7a1 1 MRIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLIS--D---TFEGAVVDAKY 74 (162)
T ss_dssp CEEEEETT-TCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEEC--S---SHHHHHTTCSE
T ss_pred CEEEEECC-CHHHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceEEEe--c---CcccccCCCCE
Confidence 57999998 4455444432 222 1 35799998877654311 1222333332 2 23679999999
Q ss_pred EEEc
Q 029118 167 IICP 170 (198)
Q Consensus 167 VIh~ 170 (198)
||..
T Consensus 75 VVit 78 (162)
T d1up7a1 75 VIFQ 78 (162)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 9987
|
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=81.83 E-value=0.097 Score=45.53 Aligned_cols=72 Identities=18% Similarity=0.134 Sum_probs=48.3
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCCc---cccc--c--------------------cCCc--eEEE
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR---NAME--S--------------------FGTY--VESM 147 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~~---~a~~--~--------------------~g~~--vevV 147 (198)
.....+|||.|+.| +|.++++.|...|. ++.++..+.- .... . +.++ ++.+
T Consensus 34 ~l~~~kVlvvG~Gg-lG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~~~ 112 (426)
T d1yovb1 34 LLDTCKVLVIGAGG-LGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPH 112 (426)
T ss_dssp HHHHCCEEEECSST-THHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEE
T ss_pred HHhcCeEEEECCCH-HHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceEee
Confidence 34567899999966 99999999999997 6777764431 1100 0 1133 4455
Q ss_pred EccCCCHHHHHHhhcCccEEEEc
Q 029118 148 AGDASNKKFLKTALRGVRSIICP 170 (198)
Q Consensus 148 ~GDl~D~~sL~~AL~GvDaVIh~ 170 (198)
..++.+.. ...+++.|.||.+
T Consensus 113 ~~~i~~~~--~~~~~~~DlVi~~ 133 (426)
T d1yovb1 113 FNKIQDFN--DTFYRQFHIIVCG 133 (426)
T ss_dssp CSCGGGBC--HHHHTTCSEEEEC
T ss_pred eccccchH--HHHHHhcchheec
Confidence 55555433 3568899999988
|
| >d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Trypanosoma cruzi [TaxId: 5693]
Probab=81.69 E-value=1 Score=31.17 Aligned_cols=36 Identities=14% Similarity=0.019 Sum_probs=27.5
Q ss_pred CCeEEEEcCCChHHHHHHHHHH---HCCCcEEEEEeCCcc
Q 029118 99 RDAVLVTDGDSDIGQMVILSLI---VKRTRIKALVKDKRN 135 (198)
Q Consensus 99 ~~~ILVTGATGfIG~~Vvr~Ll---~~G~~VralvR~~~~ 135 (198)
.++++|.|| |++|-.++..|. .+|.+|..+.|.+.-
T Consensus 20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~i 58 (117)
T d1aoga2 20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEMI 58 (117)
T ss_dssp CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSSS
T ss_pred CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccchh
Confidence 458999998 999999885544 456789999886543
|
| >d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Thermus aquaticus [TaxId: 271]
Probab=81.59 E-value=1.6 Score=32.95 Aligned_cols=87 Identities=22% Similarity=0.198 Sum_probs=55.2
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCccccc------------ccCCce------------EEEEccCCCHHH
Q 029118 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------------SFGTYV------------ESMAGDASNKKF 156 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~------------~~g~~v------------evV~GDl~D~~s 156 (198)
+|.|- |=|.|||.+.|.|..++.+|.++- ++..... .+...+ .+..-.-.||+.
T Consensus 2 kigIN-GfGRIGR~~~R~l~~~~i~iv~IN-d~~~~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~p~~ 79 (168)
T d2g82a1 2 KVGIN-GFGRIGRQVFRILHSRGVEVALIN-DLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDPKE 79 (168)
T ss_dssp EEEEE-CCSHHHHHHHHHHHHHTCCEEEEE-CSSCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSGGG
T ss_pred EEEEE-CCcHHHHHHHHHHhcCCCEEEEEC-CCcchhhhhheeecccccCccccccccccceeEecceeEEEEecCChHH
Confidence 45544 579999999999999999998886 3322210 011111 123334567777
Q ss_pred HHHhhcCccEEEEcC----hhHHHHHHHhCCCCeEEE
Q 029118 157 LKTALRGVRSIICPS----EGFISNAGSLKGVQHVIL 189 (198)
Q Consensus 157 L~~AL~GvDaVIh~a----~G~lldAA~~~GVkRiV~ 189 (198)
+.=.-.|+|.|+-+. ...-++.-.++|++|+|.
T Consensus 80 i~W~~~gvdiViEcTG~f~~~~~~~~hl~~gakkVii 116 (168)
T d2g82a1 80 IPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVII 116 (168)
T ss_dssp CCTGGGTEEEEEECSSSCCBHHHHTHHHHTTCSEEEE
T ss_pred CcccccCCceeEeccccccchHHhhhhhccccceeee
Confidence 776667999999772 112344445679999987
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=81.56 E-value=0.6 Score=37.21 Aligned_cols=32 Identities=9% Similarity=0.012 Sum_probs=23.5
Q ss_pred CeEEEEcC------CChHH---HHHHHHHHHCCCcEEEEEe
Q 029118 100 DAVLVTDG------DSDIG---QMVILSLIVKRTRIKALVK 131 (198)
Q Consensus 100 ~~ILVTGA------TGfIG---~~Vvr~Ll~~G~~VralvR 131 (198)
|+||+.+. +|.+| .+++++|.++||+|+++..
T Consensus 1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp 41 (437)
T d2bisa1 1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTP 41 (437)
T ss_dssp CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCCEEEEEec
Confidence 56777553 35555 5568889999999999974
|
| >d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Pyrobaculum islandicum [TaxId: 2277]
Probab=81.42 E-value=1 Score=35.91 Aligned_cols=34 Identities=12% Similarity=0.124 Sum_probs=30.8
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEE
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALV 130 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~Vralv 130 (198)
+..+++|+|-| -|.+|+++++.|.+.|.+|+++.
T Consensus 28 ~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vs 61 (242)
T d1v9la1 28 GIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVS 61 (242)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEE
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEee
Confidence 46678999997 89999999999999999999886
|
| >d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: N,N-dimethylglycine oxidase species: Arthrobacter globiformis [TaxId: 1665]
Probab=81.18 E-value=0.88 Score=35.19 Aligned_cols=32 Identities=13% Similarity=0.216 Sum_probs=27.6
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCC-cEEEEEeCC
Q 029118 101 AVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK 133 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~G~-~VralvR~~ 133 (198)
.|+|.|| |-+|..++.+|.++|. +|.++.|++
T Consensus 3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~ 35 (305)
T d1pj5a2 3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP 35 (305)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 5888885 8999999999999995 699998864
|
| >d2h1qa1 c.67.3.1 (A:1-251) Hypothetical protein Dhaf_3308 {Desulfitobacterium hafniense [TaxId: 49338]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PLP-dependent transferase-like superfamily: Dhaf3308-like family: Dhaf3308-like domain: Hypothetical protein Dhaf 3308 species: Desulfitobacterium hafniense [TaxId: 49338]
Probab=81.06 E-value=0.84 Score=36.69 Aligned_cols=74 Identities=14% Similarity=0.055 Sum_probs=51.3
Q ss_pred cCCCCeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccccccCCceEEEEccCCCHHHHHHhhcCccEEEEcC----
Q 029118 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS---- 171 (198)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~~~~g~~vevV~GDl~D~~sL~~AL~GvDaVIh~a---- 171 (198)
...+++|.|.|- . ..++++.+++.+++++.|+|.. ||+-++ +-...+..||+||.+.
T Consensus 119 ~~~g~kV~vIG~---~--P~v~~l~~~~~~~~VlE~~p~~-------------gd~p~~-~~~~lLp~aD~viiTGsTlv 179 (251)
T d2h1qa1 119 EVKGKKVGVVGH---F--PHLESLLEPICDLSILEWSPEE-------------GDYPLP-ASEFILPECDYVYITCASVV 179 (251)
T ss_dssp TTTTSEEEEESC---C--TTHHHHHTTTSEEEEEESSCCT-------------TCEEGG-GHHHHGGGCSEEEEETHHHH
T ss_pred ccCCCEEEEEec---c--hhHHHHHhcCCcEEEEeCCCCC-------------CCCCch-HHHHhhhcCCEEEEEechhh
Confidence 445788999874 3 5778888999999999998742 223332 4578899999999982
Q ss_pred hhH---HHHHHHhCCCCeEEEE
Q 029118 172 EGF---ISNAGSLKGVQHVILL 190 (198)
Q Consensus 172 ~G~---lldAA~~~GVkRiV~v 190 (198)
.++ +++.|+.+ +++|.+
T Consensus 180 N~Tl~~LL~~~~~a--~~vvl~ 199 (251)
T d2h1qa1 180 DKTLPRLLELSRNA--RRITLV 199 (251)
T ss_dssp HTCHHHHHHHTTTS--SEEEEE
T ss_pred cCCHHHHHHhCCcC--CEEEEE
Confidence 333 66666543 456555
|
| >d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]
Probab=81.03 E-value=2 Score=32.57 Aligned_cols=88 Identities=14% Similarity=0.108 Sum_probs=52.1
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCcccc---c---------ccCCce------------EEEEccCCCHHH
Q 029118 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---E---------SFGTYV------------ESMAGDASNKKF 156 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~~a~---~---------~~g~~v------------evV~GDl~D~~s 156 (198)
+|.|-| =|.|||.+.|++++++.+|.++--...... . .+...+ ++-.-.-.||+.
T Consensus 2 kIgING-fGRIGR~~~R~~~~~~~~ivaINd~~~~~~~~~yLlkyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~p~~ 80 (169)
T d1dssg1 2 KIGING-FGRIGRLVLRAALEMGAQVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMKPEN 80 (169)
T ss_dssp CEEEEC-CSHHHHHHHHHHHHHTCCEEEEECTTSCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred eEEEEC-CcHHHHHHHHHHHhCCCcEEEECCCCcCHHHHHHHHhcccccCCcCCeEEEeCCEEEECCEEEEEEecCChHH
Confidence 566666 899999999999999999888763211111 0 011112 122233456666
Q ss_pred HHHhhcCccEEEEcChhH-HHHHH---HhCCCCeEEE
Q 029118 157 LKTALRGVRSIICPSEGF-ISNAG---SLKGVQHVIL 189 (198)
Q Consensus 157 L~~AL~GvDaVIh~a~G~-lldAA---~~~GVkRiV~ 189 (198)
+.=.-.|+|.||=|.--+ -.+.+ .++|++++|.
T Consensus 81 i~W~~~gvD~ViEcTG~f~~~~~~~~hl~~gakkVii 117 (169)
T d1dssg1 81 IPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVII 117 (169)
T ss_dssp CCHHHHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEE
T ss_pred CCccccCCCEEEecCceEcCHHHHHHHHhcCCceEee
Confidence 554446899999662111 12222 3459999776
|
| >d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=80.60 E-value=0.73 Score=36.71 Aligned_cols=33 Identities=9% Similarity=0.148 Sum_probs=28.4
Q ss_pred eEEEEcCCChHHHHHHHHHHHCCCcEEEEEeCCc
Q 029118 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (198)
Q Consensus 101 ~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~~~ 134 (198)
.|+|.| +|..|..++++|.++|++|.++-+++.
T Consensus 3 dv~IIG-aG~sGl~~A~~L~~~g~~V~iiEk~~~ 35 (298)
T d1i8ta1 3 DYIIVG-SGLFGAVCANELKKLNKKVLVIEKRNH 35 (298)
T ss_dssp EEEEEC-CSHHHHHHHHHHGGGTCCEEEECSSSS
T ss_pred cEEEEC-CcHHHHHHHHHHHhCCCcEEEEECCCC
Confidence 478887 599999999999999999999987653
|
| >d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=80.46 E-value=0.17 Score=37.56 Aligned_cols=26 Identities=19% Similarity=0.202 Sum_probs=22.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcE
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRI 126 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~V 126 (198)
|+|+|.|| |-+|..++.+|.++|++|
T Consensus 1 mkV~VIGa-Gi~GlstA~~L~~~G~~v 26 (246)
T d1kifa1 1 MRVVVIGA-GVIGLSTALCIHERYHSV 26 (246)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHHTTT
T ss_pred CEEEEECc-hHHHHHHHHHHHHCCCCc
Confidence 57899985 999999999999999864
|
| >d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=80.39 E-value=0.53 Score=34.20 Aligned_cols=32 Identities=13% Similarity=-0.062 Sum_probs=26.9
Q ss_pred CeEEEEcCCChHHHHHHHHHHHCCCcEEEEEeC
Q 029118 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD 132 (198)
Q Consensus 100 ~~ILVTGATGfIG~~Vvr~Ll~~G~~VralvR~ 132 (198)
.+|+|.| .|++|-.++..|...|++|.++.+.
T Consensus 4 a~VvIIG-gG~~G~e~A~~l~~~g~~v~i~~~~ 35 (183)
T d1d7ya1 4 APVVVLG-AGLASVSFVAELRQAGYQGLITVVG 35 (183)
T ss_dssp SSEEEEC-CSHHHHHHHHHHHHHTCCSCEEEEE
T ss_pred CCEEEEC-ccHHHHHHHHHHHhcCCceEEEEEe
Confidence 3588888 7999999999999999887777653
|